Query psy11676
Match_columns 131
No_of_seqs 110 out of 1024
Neff 4.4
Searched_HMMs 29240
Date Fri Aug 16 16:01:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11676.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11676hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j5v_A Glutamate 5-kinase; pro 99.8 9.6E-19 3.3E-23 146.9 8.0 102 26-128 2-126 (367)
2 3nwy_A Uridylate kinase; allos 99.5 8.5E-14 2.9E-18 113.7 7.8 98 25-126 47-166 (281)
3 2ako_A Glutamate 5-kinase; str 99.4 1.7E-13 5.9E-18 107.4 7.0 97 28-128 1-119 (251)
4 4a7w_A Uridylate kinase; trans 99.4 2.5E-13 8.7E-18 107.3 6.8 100 27-126 6-125 (240)
5 3ek6_A Uridylate kinase; UMPK 99.4 4.6E-13 1.6E-17 106.1 5.7 78 27-104 8-100 (243)
6 1z9d_A Uridylate kinase, UK, U 99.2 1.7E-11 5.9E-16 96.6 7.2 93 27-122 6-120 (252)
7 2va1_A Uridylate kinase; UMPK, 99.2 2.5E-11 8.5E-16 96.2 7.3 93 23-118 19-133 (256)
8 3l86_A Acetylglutamate kinase; 99.1 5E-11 1.7E-15 97.1 6.5 49 29-86 37-87 (279)
9 1ybd_A Uridylate kinase; alpha 99.1 2E-10 6.8E-15 89.0 7.8 60 27-86 6-68 (239)
10 2a1f_A Uridylate kinase; PYRH, 99.0 3.7E-10 1.3E-14 88.6 5.8 60 27-86 7-69 (247)
11 2jjx_A Uridylate kinase, UMP k 99.0 4.9E-10 1.7E-14 88.5 6.1 60 23-82 7-67 (255)
12 2brx_A Uridylate kinase; UMP k 99.0 7.1E-10 2.4E-14 87.3 5.8 55 23-81 14-69 (244)
13 3k4o_A Isopentenyl phosphate k 98.9 2E-09 6.7E-14 86.4 7.3 99 28-127 6-140 (266)
14 4axs_A Carbamate kinase; oxido 98.9 1.6E-09 5.5E-14 90.5 4.6 63 22-86 18-85 (332)
15 1e19_A Carbamate kinase-like c 98.8 5.4E-09 1.8E-13 85.5 5.7 59 28-86 2-63 (314)
16 2buf_A Acetylglutamate kinase; 98.8 6.4E-09 2.2E-13 84.2 5.1 53 27-86 25-79 (300)
17 2e9y_A Carbamate kinase; trans 98.8 8.2E-09 2.8E-13 84.3 5.6 61 26-86 2-67 (316)
18 3d40_A FOMA protein; fosfomyci 98.7 7.5E-09 2.6E-13 83.5 4.6 59 27-86 22-82 (286)
19 2v5h_A Acetylglutamate kinase; 98.7 7.3E-09 2.5E-13 85.0 3.8 54 27-87 48-103 (321)
20 2bty_A Acetylglutamate kinase; 98.7 9.4E-09 3.2E-13 81.9 3.6 52 28-86 21-74 (282)
21 2ap9_A NAG kinase, acetylgluta 98.7 2.3E-08 7.8E-13 80.6 5.4 53 27-86 24-78 (299)
22 2ij9_A Uridylate kinase; struc 98.6 5E-08 1.7E-12 74.7 6.3 46 29-81 1-47 (219)
23 2we5_A Carbamate kinase 1; arg 98.6 6.7E-08 2.3E-12 78.5 7.3 52 28-82 2-57 (310)
24 2j4j_A Uridylate kinase; trans 98.6 5.5E-08 1.9E-12 74.9 6.4 49 29-82 1-50 (226)
25 2rd5_A Acetylglutamate kinase- 98.6 4.3E-08 1.5E-12 79.1 5.1 52 28-86 36-89 (298)
26 2ogx_A Molybdenum storage prot 98.5 9.6E-08 3.3E-12 76.7 5.4 89 30-128 41-142 (276)
27 3d2m_A Putative acetylglutamat 98.5 1.4E-07 4.9E-12 79.1 6.0 51 28-86 43-95 (456)
28 2ogx_B Molybdenum storage prot 98.5 8E-08 2.8E-12 76.6 4.2 44 29-78 37-80 (270)
29 3l76_A Aspartokinase; alloster 98.4 6.9E-08 2.4E-12 85.4 2.3 47 28-81 1-47 (600)
30 3ll5_A Gamma-glutamyl kinase r 98.3 5.2E-07 1.8E-11 71.3 4.2 53 27-84 2-56 (249)
31 2egx_A Putative acetylglutamat 98.2 2.5E-06 8.5E-11 67.7 5.6 47 30-86 1-49 (269)
32 3ab4_A Aspartokinase; aspartat 98.1 2.1E-06 7.2E-11 72.3 4.5 52 28-86 1-52 (421)
33 1gs5_A Acetylglutamate kinase; 97.7 3.9E-05 1.3E-09 60.1 5.3 43 28-77 2-45 (258)
34 3ll9_A Isopentenyl phosphate k 97.6 4.2E-05 1.4E-09 61.0 4.3 47 28-76 2-50 (269)
35 3kzf_A Carbamate kinase; argin 96.2 0.0074 2.5E-07 50.3 6.1 52 26-77 3-57 (317)
36 3zzh_A Acetylglutamate kinase; 95.7 0.012 4.2E-07 48.3 5.2 40 28-76 48-87 (307)
37 3s6g_A N-acetylglutamate kinas 94.8 0.012 4.1E-07 50.9 2.4 40 28-76 58-97 (460)
38 4ab7_A Protein Arg5,6, mitocho 94.2 0.03 1E-06 48.6 3.4 40 28-76 48-87 (464)
39 3s6k_A Acetylglutamate kinase; 93.0 0.015 5.1E-07 50.4 -0.5 39 29-76 62-100 (467)
40 3c1m_A Probable aspartokinase; 80.3 1.5 5.3E-05 37.2 4.0 40 30-77 2-42 (473)
41 2pr7_A Haloacid dehalogenase/e 77.8 4.4 0.00015 26.2 4.9 29 50-78 17-45 (137)
42 2cdq_A Aspartokinase; aspartat 67.4 4.8 0.00016 34.9 4.0 41 27-76 25-65 (510)
43 2j0w_A Lysine-sensitive aspart 64.9 4.1 0.00014 34.6 3.0 39 28-76 2-40 (449)
44 3mil_A Isoamyl acetate-hydroly 63.8 20 0.00069 25.3 6.2 52 27-78 72-124 (240)
45 3fvv_A Uncharacterized protein 63.5 6.1 0.00021 28.0 3.3 25 54-78 95-119 (232)
46 3tvi_A Aspartokinase; structur 63.3 4.5 0.00015 34.5 2.9 37 30-76 4-40 (446)
47 1f2t_B RAD50 ABC-ATPase; DNA d 63.3 7.8 0.00027 27.7 3.9 37 40-76 86-122 (148)
48 1ivn_A Thioesterase I; hydrola 60.7 29 0.001 23.9 6.4 46 27-75 62-107 (190)
49 2pcj_A ABC transporter, lipopr 59.3 16 0.00053 27.4 5.1 37 40-76 163-199 (224)
50 1g6h_A High-affinity branched- 57.7 17 0.00057 27.8 5.1 37 40-76 176-212 (257)
51 3p94_A GDSL-like lipase; serin 57.2 18 0.00062 24.9 4.8 50 27-77 74-124 (204)
52 3l8h_A Putative haloacid dehal 56.2 8.6 0.00029 26.5 2.9 24 54-77 30-53 (179)
53 1b0u_A Histidine permease; ABC 54.9 18 0.00063 27.8 5.0 37 40-76 176-212 (262)
54 4amg_A Snogd; transferase, pol 54.8 9.6 0.00033 29.4 3.3 28 51-78 34-61 (400)
55 4aby_A DNA repair protein RECN 54.0 17 0.00059 28.8 4.8 36 41-77 321-356 (415)
56 2olj_A Amino acid ABC transpor 53.5 21 0.00072 27.7 5.1 37 40-76 182-218 (263)
57 1ji0_A ABC transporter; ATP bi 53.4 19 0.00063 27.3 4.7 37 40-76 162-198 (240)
58 2yz2_A Putative ABC transporte 53.4 21 0.00073 27.4 5.1 37 40-76 161-197 (266)
59 3tif_A Uncharacterized ABC tra 53.2 17 0.00058 27.5 4.4 37 40-76 168-205 (235)
60 3hp4_A GDSL-esterase; psychrot 52.9 29 0.001 23.6 5.3 46 27-75 66-111 (185)
61 1vpl_A ABC transporter, ATP-bi 52.5 21 0.0007 27.6 4.9 37 40-76 169-205 (256)
62 1nnl_A L-3-phosphoserine phosp 51.1 11 0.00038 26.5 2.9 26 55-80 90-115 (225)
63 2qi9_C Vitamin B12 import ATP- 50.7 26 0.00089 26.9 5.2 37 40-76 156-192 (249)
64 4fzr_A SSFS6; structural genom 50.6 19 0.00065 28.0 4.4 24 55-78 31-54 (398)
65 4hf7_A Putative acylhydrolase; 49.5 31 0.0011 24.6 5.2 48 27-75 78-126 (209)
66 3q3v_A Phosphoglycerate kinase 49.2 38 0.0013 29.1 6.3 49 27-75 16-64 (403)
67 2p9j_A Hypothetical protein AQ 49.0 12 0.00039 25.5 2.6 24 56-79 41-64 (162)
68 3oti_A CALG3; calicheamicin, T 48.7 19 0.00066 28.0 4.2 20 56-75 37-56 (398)
69 3ib6_A Uncharacterized protein 48.0 13 0.00043 26.3 2.8 25 53-77 36-60 (189)
70 4gxt_A A conserved functionall 47.8 13 0.00043 30.8 3.1 25 54-78 224-248 (385)
71 3hh1_A Tetrapyrrole methylase 47.7 17 0.00058 24.7 3.3 22 55-76 67-89 (117)
72 3qkt_A DNA double-strand break 47.2 18 0.00063 28.5 3.9 37 40-76 277-313 (339)
73 2nq2_C Hypothetical ABC transp 47.1 29 0.001 26.6 5.0 37 40-76 151-188 (253)
74 3qf7_A RAD50; ABC-ATPase, ATPa 47.0 18 0.00062 29.2 3.9 38 39-76 307-344 (365)
75 2qbu_A Precorrin-2 methyltrans 46.9 20 0.0007 26.4 3.9 27 51-77 78-104 (232)
76 2q0q_A ARYL esterase; SGNH hyd 46.6 49 0.0017 22.9 5.8 49 28-78 84-142 (216)
77 3e59_A Pyoverdine biosynthesis 46.6 11 0.00038 31.5 2.6 32 47-78 87-118 (330)
78 2b0c_A Putative phosphatase; a 45.9 20 0.00068 24.5 3.5 24 54-77 94-117 (206)
79 2d2e_A SUFC protein; ABC-ATPas 45.7 16 0.00056 27.8 3.3 36 40-75 166-201 (250)
80 2fpr_A Histidine biosynthesis 45.3 13 0.00046 26.2 2.6 24 53-76 44-67 (176)
81 2gmw_A D,D-heptose 1,7-bisphos 45.3 15 0.00053 26.4 2.9 49 27-77 24-76 (211)
82 3ux8_A Excinuclease ABC, A sub 44.9 29 0.00099 30.1 5.1 37 40-76 569-605 (670)
83 2fea_A 2-hydroxy-3-keto-5-meth 44.5 11 0.00038 27.3 2.1 24 55-78 81-104 (236)
84 1vpe_A Phosphoglycerate kinase 43.8 34 0.0011 29.3 5.2 48 27-75 11-58 (398)
85 2wm8_A MDP-1, magnesium-depend 43.7 13 0.00044 26.1 2.3 24 54-77 71-94 (187)
86 3gfo_A Cobalt import ATP-bindi 43.5 26 0.00087 27.5 4.2 37 40-76 166-203 (275)
87 2zu0_C Probable ATP-dependent 43.4 17 0.00059 28.0 3.1 36 40-75 187-222 (267)
88 2ffc_A Orotidine 5-monophospha 42.9 25 0.00086 29.3 4.2 37 31-72 130-166 (353)
89 2o2x_A Hypothetical protein; s 41.9 10 0.00035 27.3 1.5 25 54-78 59-83 (218)
90 2zg6_A Putative uncharacterize 41.2 16 0.00054 25.9 2.4 23 55-77 99-121 (220)
91 1v6s_A Phosphoglycerate kinase 41.0 39 0.0013 28.8 5.2 48 27-75 10-57 (390)
92 1php_A 3-phosphoglycerate kina 40.8 40 0.0014 28.8 5.2 48 27-75 12-59 (394)
93 1p9o_A Phosphopantothenoylcyst 40.6 13 0.00046 30.3 2.2 14 65-78 34-47 (313)
94 1zmr_A Phosphoglycerate kinase 40.4 41 0.0014 28.7 5.2 48 27-75 12-59 (387)
95 3m1y_A Phosphoserine phosphata 40.3 17 0.00058 25.1 2.4 24 56-79 80-103 (217)
96 1yns_A E-1 enzyme; hydrolase f 40.3 24 0.00081 26.5 3.4 30 54-83 133-162 (261)
97 4ap9_A Phosphoserine phosphata 40.2 25 0.00087 23.6 3.3 23 55-77 83-105 (201)
98 2obb_A Hypothetical protein; s 40.1 20 0.00068 25.9 2.8 21 55-75 28-48 (142)
99 3dci_A Arylesterase; SGNH_hydr 40.1 70 0.0024 22.9 5.9 49 28-78 102-158 (232)
100 4as2_A Phosphorylcholine phosp 39.8 20 0.00069 28.9 3.1 25 55-79 147-171 (327)
101 4e16_A Precorrin-4 C(11)-methy 38.9 25 0.00086 26.9 3.4 23 54-76 64-86 (253)
102 3ndc_A Precorrin-4 C(11)-methy 38.7 20 0.0007 27.8 2.9 23 54-76 63-85 (264)
103 3mmz_A Putative HAD family hyd 38.4 19 0.00064 25.4 2.4 21 59-79 47-67 (176)
104 16pk_A PGK, 3-phosphoglycerate 38.0 50 0.0017 28.4 5.4 48 27-75 11-58 (415)
105 3rjt_A Lipolytic protein G-D-S 37.8 24 0.00081 24.3 2.9 49 27-75 83-138 (216)
106 2fds_A Orotidine-monophosphate 37.4 43 0.0015 27.9 4.8 37 31-72 120-156 (352)
107 2onk_A Molybdate/tungstate ABC 37.1 37 0.0013 25.8 4.1 37 40-76 149-186 (240)
108 1qpg_A PGK, 3-phosphoglycerate 37.0 61 0.0021 27.9 5.8 48 27-75 14-62 (415)
109 3kd3_A Phosphoserine phosphohy 37.0 26 0.0009 23.7 2.9 23 56-78 87-109 (219)
110 3mn1_A Probable YRBI family ph 36.8 22 0.00077 25.3 2.7 22 59-80 54-75 (189)
111 2i7d_A 5'(3')-deoxyribonucleot 36.8 22 0.00075 24.9 2.6 24 54-77 76-100 (193)
112 3ux8_A Excinuclease ABC, A sub 36.5 30 0.001 30.1 3.8 36 40-75 227-262 (670)
113 2cun_A Phosphoglycerate kinase 36.2 42 0.0014 28.8 4.7 49 27-76 10-58 (410)
114 1q92_A 5(3)-deoxyribonucleotid 35.7 25 0.00085 24.8 2.7 24 54-77 78-102 (197)
115 2nyv_A Pgpase, PGP, phosphogly 35.7 32 0.0011 24.3 3.4 24 55-78 87-110 (222)
116 3f9r_A Phosphomannomutase; try 35.6 52 0.0018 24.6 4.7 35 40-79 15-49 (246)
117 1yqt_A RNAse L inhibitor; ATP- 35.2 52 0.0018 28.1 5.1 36 40-75 181-216 (538)
118 3i28_A Epoxide hydrolase 2; ar 35.2 30 0.001 27.0 3.3 22 55-76 104-125 (555)
119 3m9l_A Hydrolase, haloacid deh 35.0 35 0.0012 23.5 3.4 24 56-79 75-98 (205)
120 3e58_A Putative beta-phosphogl 35.0 32 0.0011 23.0 3.1 26 55-80 93-118 (214)
121 4ad8_A DNA repair protein RECN 35.0 34 0.0012 28.7 3.9 35 41-76 423-457 (517)
122 1k1e_A Deoxy-D-mannose-octulos 34.8 27 0.00092 24.4 2.8 22 57-78 41-62 (180)
123 1fxw_F Alpha2, platelet-activa 34.5 84 0.0029 22.4 5.5 46 27-77 94-141 (229)
124 2pib_A Phosphorylated carbohyd 34.4 37 0.0013 22.8 3.4 24 56-79 89-112 (216)
125 1sgw_A Putative ABC transporte 34.0 19 0.00065 27.1 2.0 36 40-75 156-191 (214)
126 2ff7_A Alpha-hemolysin translo 33.8 66 0.0023 24.4 5.1 36 40-76 168-203 (247)
127 1zrn_A L-2-haloacid dehalogena 33.5 34 0.0012 23.8 3.1 23 56-78 100-122 (232)
128 3e8m_A Acylneuraminate cytidyl 33.2 27 0.00093 23.6 2.5 23 59-81 39-61 (164)
129 1yzf_A Lipase/acylhydrolase; s 33.0 84 0.0029 21.0 5.0 49 26-78 66-115 (195)
130 3ia7_A CALG4; glycosysltransfe 32.8 47 0.0016 25.2 4.1 28 51-78 16-43 (402)
131 2r8e_A 3-deoxy-D-manno-octulos 32.8 27 0.00092 24.7 2.5 20 59-78 61-80 (188)
132 3pgv_A Haloacid dehalogenase-l 32.3 1E+02 0.0035 22.8 5.9 46 25-77 18-64 (285)
133 2vf7_A UVRA2, excinuclease ABC 32.1 58 0.002 30.0 5.2 37 40-76 756-792 (842)
134 3kbb_A Phosphorylated carbohyd 32.1 57 0.0019 22.5 4.1 28 56-83 89-116 (216)
135 2ihy_A ABC transporter, ATP-bi 31.9 35 0.0012 26.6 3.3 37 40-76 184-222 (279)
136 2b82_A APHA, class B acid phos 31.9 30 0.001 25.3 2.8 23 55-77 92-114 (211)
137 1j3a_A 50S ribosomal protein L 31.8 43 0.0015 24.6 3.5 25 52-76 10-34 (142)
138 1cbf_A Cobalt-precorrin-4 tran 31.8 35 0.0012 26.4 3.2 24 54-77 80-103 (285)
139 1e69_A Chromosome segregation 31.6 67 0.0023 24.9 4.9 36 40-76 246-281 (322)
140 3oz7_A Phosphoglycerate kinase 31.6 38 0.0013 29.2 3.6 48 27-75 17-65 (417)
141 3pdw_A Uncharacterized hydrola 31.6 47 0.0016 24.2 3.7 40 28-75 6-46 (266)
142 1xpj_A Hypothetical protein; s 31.5 46 0.0016 22.4 3.5 23 55-77 28-50 (126)
143 3c48_A Predicted glycosyltrans 31.4 93 0.0032 24.0 5.6 22 52-76 47-68 (438)
144 3kzx_A HAD-superfamily hydrola 31.4 36 0.0012 23.7 2.9 23 56-78 108-130 (231)
145 2wzb_A Phosphoglycerate kinase 31.3 64 0.0022 27.8 5.0 48 27-75 14-62 (416)
146 2no4_A (S)-2-haloacid dehaloge 31.2 39 0.0013 23.8 3.1 23 56-78 110-132 (240)
147 2o14_A Hypothetical protein YX 31.2 98 0.0033 24.9 5.9 47 29-76 232-278 (375)
148 1s4d_A Uroporphyrin-III C-meth 31.1 39 0.0013 26.2 3.4 24 54-77 79-102 (280)
149 2hsz_A Novel predicted phospha 31.0 42 0.0014 24.1 3.4 23 56-78 119-141 (243)
150 1ltq_A Polynucleotide kinase; 31.0 42 0.0014 25.2 3.5 25 53-77 190-214 (301)
151 1rlm_A Phosphatase; HAD family 30.5 54 0.0019 24.2 4.0 45 29-79 4-49 (271)
152 4eze_A Haloacid dehalogenase-l 30.4 29 0.001 27.3 2.6 26 56-81 184-209 (317)
153 2e0n_A Precorrin-2 C20-methylt 30.3 27 0.00093 26.5 2.3 24 54-77 83-106 (259)
154 1rkq_A Hypothetical protein YI 30.3 67 0.0023 24.0 4.5 42 29-77 6-48 (282)
155 1ve2_A Uroporphyrin-III C-meth 30.2 46 0.0016 24.8 3.6 23 54-76 65-87 (235)
156 1vq8_J 50S ribosomal protein L 30.1 47 0.0016 24.5 3.5 68 52-126 18-86 (145)
157 3bk7_A ABC transporter ATP-bin 30.1 68 0.0023 28.0 5.1 37 40-76 251-287 (607)
158 1w1w_A Structural maintenance 29.9 57 0.002 26.4 4.3 36 41-76 361-396 (430)
159 3otg_A CALG1; calicheamicin, T 29.7 71 0.0024 24.5 4.6 21 58-78 39-59 (412)
160 3n1u_A Hydrolase, HAD superfam 29.4 35 0.0012 24.4 2.7 22 59-80 54-75 (191)
161 3qgm_A P-nitrophenyl phosphata 29.3 37 0.0013 24.7 2.8 42 26-75 6-48 (268)
162 4fey_A Phosphoglycerate kinase 29.3 50 0.0017 28.2 4.0 48 27-75 15-62 (395)
163 3dv9_A Beta-phosphoglucomutase 29.2 49 0.0017 23.0 3.4 23 56-78 113-135 (247)
164 2fi1_A Hydrolase, haloacid deh 29.2 51 0.0017 22.0 3.4 23 55-77 86-108 (190)
165 4g1u_C Hemin import ATP-bindin 29.1 66 0.0022 24.8 4.4 37 40-76 170-207 (266)
166 3qbc_A 2-amino-4-hydroxy-6-hyd 28.9 81 0.0028 23.5 4.7 39 28-76 4-43 (161)
167 2ghi_A Transport protein; mult 28.6 74 0.0025 24.3 4.6 35 40-75 178-212 (260)
168 1es9_A PAF-AH, platelet-activa 28.5 1.2E+02 0.0041 21.5 5.4 46 27-77 93-140 (232)
169 4ex6_A ALNB; modified rossman 28.3 44 0.0015 23.2 3.0 23 56-78 109-131 (237)
170 3n07_A 3-deoxy-D-manno-octulos 28.3 37 0.0013 24.7 2.7 21 59-79 60-80 (195)
171 1va0_A Uroporphyrin-III C-meth 28.2 52 0.0018 24.5 3.6 24 54-77 62-85 (239)
172 3l5k_A Protein GS1, haloacid d 28.2 48 0.0016 23.5 3.2 23 56-78 117-139 (250)
173 3s6j_A Hydrolase, haloacid deh 28.2 49 0.0017 22.7 3.2 23 56-78 96-118 (233)
174 2ixe_A Antigen peptide transpo 28.2 57 0.002 25.1 3.9 37 40-76 179-216 (271)
175 2go7_A Hydrolase, haloacid deh 28.1 55 0.0019 21.6 3.4 23 56-78 90-112 (207)
176 2hsj_A Putative platelet activ 28.1 88 0.003 21.6 4.6 49 27-78 85-135 (214)
177 2ab1_A Hypothetical protein; H 28.1 69 0.0024 22.4 4.0 53 64-129 58-110 (122)
178 3um9_A Haloacid dehalogenase, 27.7 50 0.0017 22.7 3.1 24 56-79 101-124 (230)
179 3tui_C Methionine import ATP-b 27.6 63 0.0022 26.7 4.2 37 40-76 186-223 (366)
180 3h4t_A Glycosyltransferase GTF 27.4 64 0.0022 25.4 4.1 27 52-78 13-39 (404)
181 2iya_A OLEI, oleandomycin glyc 27.3 73 0.0025 24.9 4.4 28 51-78 24-51 (424)
182 3a1c_A Probable copper-exporti 27.3 51 0.0017 24.8 3.4 24 56-79 168-191 (287)
183 3pih_A Uvrabc system protein A 26.8 79 0.0027 29.4 5.1 37 40-76 831-867 (916)
184 3ewi_A N-acylneuraminate cytid 26.6 42 0.0014 24.1 2.7 51 22-76 3-61 (168)
185 3umb_A Dehalogenase-like hydro 26.4 47 0.0016 23.0 2.8 24 56-79 104-127 (233)
186 1wyz_A Putative S-adenosylmeth 26.2 56 0.0019 24.7 3.4 20 55-74 71-90 (242)
187 3sd7_A Putative phosphatase; s 26.2 49 0.0017 23.2 2.9 25 56-80 115-139 (240)
188 2c0r_A PSAT, phosphoserine ami 26.0 89 0.003 23.6 4.5 27 52-78 50-78 (362)
189 2hi0_A Putative phosphoglycola 25.9 49 0.0017 23.6 2.9 23 56-78 115-137 (240)
190 2xbl_A Phosphoheptose isomeras 25.8 98 0.0034 21.7 4.5 34 48-81 29-62 (198)
191 1qyi_A ZR25, hypothetical prot 25.7 63 0.0021 26.7 3.9 27 52-78 216-242 (384)
192 3oiz_A Antisigma-factor antago 25.6 1.1E+02 0.0036 19.8 4.4 41 27-74 43-83 (99)
193 2ygr_A Uvrabc system protein A 25.6 84 0.0029 29.7 5.1 37 40-76 889-925 (993)
194 2r6f_A Excinuclease ABC subuni 25.5 85 0.0029 29.7 5.1 37 40-76 871-907 (972)
195 3rsc_A CALG2; TDP, enediyne, s 25.4 49 0.0017 25.6 3.0 27 52-78 33-59 (415)
196 3rlf_A Maltose/maltodextrin im 25.0 81 0.0028 26.2 4.4 37 40-76 156-193 (381)
197 3tsa_A SPNG, NDP-rhamnosyltran 24.8 81 0.0028 24.1 4.1 27 52-78 14-40 (391)
198 3j16_B RLI1P; ribosome recycli 24.7 64 0.0022 28.3 3.9 36 40-75 244-279 (608)
199 3n28_A Phosphoserine phosphata 24.6 44 0.0015 25.7 2.6 24 55-78 182-205 (335)
200 2hoq_A Putative HAD-hydrolase 24.6 44 0.0015 23.6 2.4 23 55-77 98-120 (241)
201 1l6r_A Hypothetical protein TA 24.6 69 0.0024 23.4 3.6 44 29-79 6-50 (227)
202 4b6a_O 60S ribosomal protein L 24.5 69 0.0023 24.9 3.7 26 52-77 15-40 (199)
203 1l7m_A Phosphoserine phosphata 24.5 49 0.0017 22.3 2.6 23 56-78 81-103 (211)
204 3noy_A 4-hydroxy-3-methylbut-2 24.5 40 0.0014 28.6 2.4 29 52-80 44-72 (366)
205 1qhf_A Protein (phosphoglycera 24.4 88 0.003 22.9 4.2 16 65-80 171-186 (240)
206 1e58_A Phosphoglycerate mutase 24.3 88 0.003 23.1 4.2 31 50-80 154-188 (249)
207 3skx_A Copper-exporting P-type 24.3 66 0.0022 23.0 3.4 27 55-81 148-174 (280)
208 3zvl_A Bifunctional polynucleo 24.0 52 0.0018 26.9 3.1 25 53-77 89-113 (416)
209 3p96_A Phosphoserine phosphata 24.0 51 0.0017 26.4 2.9 27 56-82 261-287 (415)
210 1z47_A CYSA, putative ABC-tran 23.9 89 0.003 25.5 4.4 37 40-76 168-205 (355)
211 3kwp_A Predicted methyltransfe 23.8 72 0.0025 25.4 3.8 22 55-76 76-98 (296)
212 3n3m_A Orotidine 5'-phosphate 23.8 81 0.0028 26.2 4.2 38 30-72 117-154 (342)
213 2i6x_A Hydrolase, haloacid deh 23.8 59 0.002 22.2 2.9 24 54-78 92-115 (211)
214 3cnh_A Hydrolase family protei 23.7 58 0.002 22.1 2.8 24 54-78 89-112 (200)
215 3nut_A Precorrin-3 methylase; 23.7 57 0.0019 24.8 3.1 19 58-76 69-87 (251)
216 3k1z_A Haloacid dehalogenase-l 23.7 61 0.0021 23.5 3.1 22 56-77 111-132 (263)
217 4dw8_A Haloacid dehalogenase-l 23.7 1.1E+02 0.0037 22.2 4.5 43 28-77 5-48 (279)
218 2i33_A Acid phosphatase; HAD s 23.7 54 0.0018 25.2 2.9 24 54-77 104-127 (258)
219 2om6_A Probable phosphoserine 23.3 67 0.0023 21.9 3.1 23 55-77 103-125 (235)
220 3nas_A Beta-PGM, beta-phosphog 23.3 61 0.0021 22.4 2.9 23 55-77 96-118 (233)
221 2b30_A Pvivax hypothetical pro 23.3 82 0.0028 24.1 3.9 45 29-79 28-73 (301)
222 4fe3_A Cytosolic 5'-nucleotida 23.3 52 0.0018 24.9 2.8 21 56-76 146-166 (297)
223 3ij5_A 3-deoxy-D-manno-octulos 23.1 52 0.0018 24.3 2.7 21 59-79 84-104 (211)
224 2wao_A Endoglucanase E; plant 23.0 1.1E+02 0.0036 23.9 4.6 46 27-75 213-261 (341)
225 3pct_A Class C acid phosphatas 22.9 56 0.0019 25.8 2.9 21 57-77 107-127 (260)
226 1fw8_A PGK P72, phosphoglycera 22.7 1.8E+02 0.0061 25.0 6.2 47 27-74 359-406 (416)
227 3qxg_A Inorganic pyrophosphata 22.5 76 0.0026 22.3 3.4 23 56-78 114-136 (243)
228 3iru_A Phoshonoacetaldehyde hy 22.4 76 0.0026 22.4 3.4 22 57-78 117-138 (277)
229 3d31_A Sulfate/molybdate ABC t 22.2 91 0.0031 25.3 4.1 37 40-76 150-187 (348)
230 3r8s_J 50S ribosomal protein L 22.1 89 0.003 23.0 3.7 26 52-77 24-61 (142)
231 1iir_A Glycosyltransferase GTF 22.0 1.2E+02 0.0041 23.7 4.7 28 51-78 12-39 (415)
232 3mc1_A Predicted phosphatase, 22.0 50 0.0017 22.7 2.2 24 56-79 91-114 (226)
233 3jx9_A Putative phosphoheptose 22.0 55 0.0019 24.3 2.6 50 55-111 92-141 (170)
234 2hx1_A Predicted sugar phospha 21.8 64 0.0022 23.8 2.9 46 23-75 9-54 (284)
235 2hhj_A Bisphosphoglycerate mut 21.8 83 0.0029 23.7 3.6 17 65-81 178-194 (267)
236 3g8r_A Probable spore coat pol 21.7 60 0.0021 27.0 3.0 50 25-76 107-172 (350)
237 1yqt_A RNAse L inhibitor; ATP- 21.7 1E+02 0.0034 26.3 4.5 37 40-76 424-461 (538)
238 2ygr_A Uvrabc system protein A 21.7 1.1E+02 0.0038 28.9 5.1 37 40-76 546-582 (993)
239 2ftc_H L13MT, MRP-L13, 39S rib 21.6 81 0.0028 23.3 3.4 25 52-76 27-63 (148)
240 3nuq_A Protein SSM1, putative 21.6 83 0.0028 22.9 3.5 27 54-80 145-173 (282)
241 1rrv_A Glycosyltransferase GTF 21.4 1.1E+02 0.0036 24.0 4.3 26 52-77 13-38 (416)
242 1g29_1 MALK, maltose transport 21.2 98 0.0033 25.3 4.2 37 40-76 162-199 (372)
243 4gp7_A Metallophosphoesterase; 21.2 17 0.00057 25.6 -0.4 22 54-75 136-157 (171)
244 2j5g_A ALR4455 protein; enzyme 21.1 2.2E+02 0.0075 21.9 6.0 64 13-76 5-77 (263)
245 2p11_A Hypothetical protein; p 21.1 58 0.002 23.1 2.5 24 54-78 99-122 (231)
246 4dgh_A Sulfate permease family 21.0 1.3E+02 0.0045 19.9 4.2 45 27-78 48-93 (130)
247 2npn_A Putative cobalamin synt 21.0 63 0.0021 24.4 2.8 20 58-77 93-112 (251)
248 2hcf_A Hydrolase, haloacid deh 20.9 71 0.0024 21.9 2.8 23 56-78 98-121 (234)
249 1mv8_A GMD, GDP-mannose 6-dehy 20.8 1.3E+02 0.0045 24.5 4.9 53 23-78 72-127 (436)
250 2fvt_A Conserved hypothetical 20.7 75 0.0026 22.7 3.0 47 68-128 68-114 (135)
251 1te2_A Putative phosphatase; s 20.6 83 0.0028 21.2 3.1 22 56-77 99-120 (226)
252 3ocu_A Lipoprotein E; hydrolas 20.6 57 0.002 25.8 2.6 20 58-77 108-127 (262)
253 2yyz_A Sugar ABC transporter, 20.5 1.1E+02 0.0036 25.1 4.2 37 40-76 156-193 (359)
254 3ty2_A 5'-nucleotidase SURE; s 20.5 66 0.0022 25.8 2.9 30 39-74 15-44 (261)
255 2ybo_A Methyltransferase; SUMT 20.5 75 0.0026 24.9 3.2 24 54-77 89-112 (294)
256 3iz5_K 60S ribosomal protein L 20.4 87 0.003 24.4 3.5 26 52-77 20-45 (206)
257 2oda_A Hypothetical protein ps 20.3 61 0.0021 23.3 2.5 26 53-78 38-63 (196)
258 2wqk_A 5'-nucleotidase SURE; S 20.3 67 0.0023 25.2 2.9 30 39-74 5-34 (251)
259 1v43_A Sugar-binding transport 20.0 1.1E+02 0.0037 25.1 4.2 37 40-76 164-201 (372)
No 1
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=99.76 E-value=9.6e-19 Score=146.92 Aligned_cols=102 Identities=25% Similarity=0.369 Sum_probs=86.5
Q ss_pred ccCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHHHhhhhcccc-ccCChHHHhhhcc---
Q psy11676 26 KYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKLAQE-LLMSLSMRETLSP--- 101 (131)
Q Consensus 26 ~~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVaaG~~~L~~~-~l~~~~~~qalaa--- 101 (131)
.++|+||||+|+|+|++++ ++++.+++..++++|+.|++.|++||||+||++++|+..|+.+ +|..+..+|++++
T Consensus 2 ~~~k~iVIKiGGs~l~~~~-~~~~~~~l~~la~~Ia~l~~~G~~vVlV~gGgi~~g~~~lg~~~~~~~l~~~qa~aavGq 80 (367)
T 2j5v_A 2 SDSQTLVVKLGTSVLTGGS-RRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQ 80 (367)
T ss_dssp -CCCEEEEEECHHHHTTTS-SSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTSCCCCSSHHHHHHHHHHHH
T ss_pred CCCCEEEEEECcHHhcCCC-CCcCHHHHHHHHHHHHHHHhCCCcEEEEEcCHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Confidence 4679999999999999875 5799999999999999999999999999999999999999843 4555555555433
Q ss_pred -------------CC------CcccccccCcchhhhHHhHHHHhhh
Q psy11676 102 -------------KD------HSRSNHFDSENPKTNIYTHIILMFV 128 (131)
Q Consensus 102 -------------~~------llT~~Df~~r~r~~Na~nTi~~~~~ 128 (131)
.| ++|.+||.++.+|.|+++||+.|+.
T Consensus 81 ~~l~~~~~~~l~~~G~~~~qvllt~~d~~~~~r~~n~~~~i~~LL~ 126 (367)
T 2j5v_A 81 SRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLD 126 (367)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEECGGGGSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCceEEEEEecccccCceEEEhHHHHHHHHHH
Confidence 23 4699999999999999999998763
No 2
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=99.47 E-value=8.5e-14 Score=113.73 Aligned_cols=98 Identities=21% Similarity=0.288 Sum_probs=70.7
Q ss_pred hccCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEc-cchHHHhhhh--cccccc----C------
Q psy11676 25 LKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVT-SGAVAFGKQK--LAQELL----M------ 91 (131)
Q Consensus 25 l~~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVS-SGAVaaG~~~--L~~~~l----~------ 91 (131)
..++||||||+|+++|++++ +++|.++|..+|++|++++++|++||||+ +|+++.|+.. ++.... +
T Consensus 47 ~~~~krIViKlGGs~L~~~~-~~ld~~~i~~la~~I~~l~~~G~~vviV~GgG~i~~g~~~~~~gl~~~~~d~~g~lat~ 125 (281)
T 3nwy_A 47 LSGYSRVLLKLGGEMFGGGQ-VGLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQLGMERTRSDYMGMLGTV 125 (281)
T ss_dssp CCCCSEEEEEECGGGGGTTS-SSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTC---CCTTTTTCCHHHHHHHHHHHHH
T ss_pred CCcCcEEEEEEchhhccCCC-CCCCHHHHHHHHHHHHHHHHCCCeEEEEECChhHhhhHHHHhcCCCccchhHHHHHHHH
Confidence 35689999999999999876 67999999999999999999999999999 5899999853 332111 0
Q ss_pred -C-hHHHhhhccCC-------CcccccccCcchhhhHHhHHHHh
Q psy11676 92 -S-LSMRETLSPKD-------HSRSNHFDSENPKTNIYTHIILM 126 (131)
Q Consensus 92 -~-~~~~qalaa~~-------llT~~Df~~r~r~~Na~nTi~~~ 126 (131)
+ ..|.++|...| ++|..+|. ++|.|.+ +++.|
T Consensus 126 ~n~~~l~~~L~~~Gi~a~~~~~~~~~~~~--~~~~~~~-~l~lL 166 (281)
T 3nwy_A 126 MNSLALQDFLEKEGIVTRVQTAITMGQVA--EPYLPLR-AVRHL 166 (281)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSCCGGGS--EECCHHH-HHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecccccccc--cccchHH-HHHHH
Confidence 0 14445565555 34677886 6787755 56544
No 3
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=99.43 E-value=1.7e-13 Score=107.40 Aligned_cols=97 Identities=32% Similarity=0.425 Sum_probs=78.8
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHHHhhhhccccccCChH-------------
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKLAQELLMSLS------------- 94 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVaaG~~~L~~~~l~~~~------------- 94 (131)
+|+||||+|+|+|+ ++ ++++.+.+..++++|+.|++. ++||||+||++++|+..++.+. ..+.
T Consensus 1 ~k~iViKlGGs~l~-~~-~~~~~~~~~~~~~~i~~l~~~-~~vVlVhgGg~~~~~~~~g~~~-~~~~~~~~l~~~~q~~l 76 (251)
T 2ako_A 1 MKRIVVKVGSHVIS-EE-NTLSFERLKNLVAFLAKLMEK-YEVILVTSAAISAGHTKLDIDR-KNLINKQVLAAIGQPFL 76 (251)
T ss_dssp -CEEEEEECHHHHB-CS-SSBCHHHHHHHHHHHHHHHHH-SEEEEEECCHHHHHHHHCCCCS-SSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCcceeC-CC-CCCCHHHHHHHHHHHHHHHhC-CCEEEEECCHHHHHHHHhCCcc-CCchHHHHHHHHHHHHH
Confidence 47999999999999 55 479999999999999999998 9999999999999999888543 2222
Q ss_pred ---HHhhhccCC------CcccccccCcchhhhHHhHHHHhhh
Q psy11676 95 ---MRETLSPKD------HSRSNHFDSENPKTNIYTHIILMFV 128 (131)
Q Consensus 95 ---~~qalaa~~------llT~~Df~~r~r~~Na~nTi~~~~~ 128 (131)
+.++|...| ++|..||.++.+|.|.+++|+.|+.
T Consensus 77 ~~~~~~~l~~~G~~~~~i~~~~~~~~~~~~~~~~~~~i~~ll~ 119 (251)
T 2ako_A 77 ISVYNELLAKFNKLGGQILLTGKDFDSRKATKHAKNAIDMMIN 119 (251)
T ss_dssp HHHHHHHHGGGTCCEEEEEECTGGGGCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEEeccchhcCcceEehHHHHHHHHHH
Confidence 334444444 4588899999999999999988753
No 4
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=99.41 E-value=2.5e-13 Score=107.29 Aligned_cols=100 Identities=14% Similarity=0.171 Sum_probs=73.1
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc-hHHHhhh--hcc-ccccC-----------
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG-AVAFGKQ--KLA-QELLM----------- 91 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG-AVaaG~~--~L~-~~~l~----------- 91 (131)
.+||||||+|+|+|++++++++|.+++..++++|+++++.|++||||+|| +++.|+. .++ ...+.
T Consensus 6 ~~k~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vvlV~gGG~~~~g~~~~~~G~~~~~~~~~~~~la~~~ 85 (240)
T 4a7w_A 6 KNKRVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNIIRGVSAAQGGIIRRTSGDYMGMLATVI 85 (240)
T ss_dssp CCCEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTTC---------CCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECHHHcCCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCcHHHhHhHHHhcCCCCCCCHHHHHHHHHHH
Confidence 47999999999999975445799999999999999999999999999999 8888876 333 11110
Q ss_pred C-hHHHhhhccCC----CcccccccCcchhhhHHhHHHHh
Q psy11676 92 S-LSMRETLSPKD----HSRSNHFDSENPKTNIYTHIILM 126 (131)
Q Consensus 92 ~-~~~~qalaa~~----llT~~Df~~r~r~~Na~nTi~~~ 126 (131)
+ ..+.++|...| .+|..|+..+.++.|.+++...|
T Consensus 86 n~~l~~~~l~~~G~~av~lt~~d~~~~~~~~~~~~i~~lL 125 (240)
T 4a7w_A 86 NAVAMQEALEHIGLDTRVQSAIEIKEICESYIYRKAIRHL 125 (240)
T ss_dssp HHHHHHHHHHHTTCCEEEEESSCCTTTSEECCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEecHHHcCcccCcCcHHHHHHHH
Confidence 1 12335566666 46889998888888888876655
No 5
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=99.37 E-value=4.6e-13 Score=106.14 Aligned_cols=78 Identities=18% Similarity=0.333 Sum_probs=62.4
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc-chHHHh--hhhccccccC------------
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS-GAVAFG--KQKLAQELLM------------ 91 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS-GAVaaG--~~~L~~~~l~------------ 91 (131)
++||||||+|+|+|++++++++|.++|..+|++|+++++.|++|+||+| |+++.| +..++.+.+.
T Consensus 8 ~~~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~~~G~~vviV~gGG~~~~~~~~~~~g~~~~~~d~~g~l~t~~N 87 (243)
T 3ek6_A 8 SYRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGNIFRGAGLAASGMDRVTGDHMGMLATVIN 87 (243)
T ss_dssp SCSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTTSCSTTTSCSSSCHHHHHHHHHHHHHHH
T ss_pred cCcEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCCCCCCHHHHHHHHHHHH
Confidence 5799999999999998765579999999999999999999999999999 576544 4555533222
Q ss_pred ChHHHhhhccCCC
Q psy11676 92 SLSMRETLSPKDH 104 (131)
Q Consensus 92 ~~~~~qalaa~~l 104 (131)
.....+++++.|+
T Consensus 88 ~~~l~~al~~~G~ 100 (243)
T 3ek6_A 88 ALAMQDALEKLGA 100 (243)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 2347788888885
No 6
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=99.22 E-value=1.7e-11 Score=96.56 Aligned_cols=93 Identities=17% Similarity=0.297 Sum_probs=67.7
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc-hHHHhh--hhcccc-ccC----------C
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG-AVAFGK--QKLAQE-LLM----------S 92 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG-AVaaG~--~~L~~~-~l~----------~ 92 (131)
++++||||+|+|+|+++++++++.+.+..++++|+.|++.|++||||+|| +++.|+ ..++.+ .+. +
T Consensus 6 ~~k~iViKlGGs~l~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgG~~~~g~~~~~lg~~~~~~~~~~~~~~~~~ 85 (252)
T 1z9d_A 6 KYQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGMDRVQADYTGMLGTVMN 85 (252)
T ss_dssp SCSEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEchHHccCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEECCChHhccchHHHcCCCCCchHHHHHHHHHHH
Confidence 47899999999999975445689999999999999999999999999975 887776 355421 121 1
Q ss_pred h-HHHhhhccCCC-------cccccccCcchhhhHHhH
Q psy11676 93 L-SMRETLSPKDH-------SRSNHFDSENPKTNIYTH 122 (131)
Q Consensus 93 ~-~~~qalaa~~l-------lT~~Df~~r~r~~Na~nT 122 (131)
. .+.++|.+.|+ .+..+|.+ +|.| .++
T Consensus 86 ~~ll~~al~~~G~~~~~~~~~~~~~~~~--~~~~-~~~ 120 (252)
T 1z9d_A 86 ALVMADSLQHYGVDTRVQTAIPMQNVAE--PYIR-GRA 120 (252)
T ss_dssp HHHHHHHHHTTTCCEEEEESSCBTTTBE--ECCH-HHH
T ss_pred HHHHHHHHHHcCCCeEEEeccccccccC--cchH-HHH
Confidence 1 15667777774 35556654 3666 444
No 7
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=99.20 E-value=2.5e-11 Score=96.21 Aligned_cols=93 Identities=15% Similarity=0.245 Sum_probs=66.5
Q ss_pred HhhccCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEc-cchHHHhhh--hcccc-ccCC------
Q psy11676 23 GQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVT-SGAVAFGKQ--KLAQE-LLMS------ 92 (131)
Q Consensus 23 ~~l~~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVS-SGAVaaG~~--~L~~~-~l~~------ 92 (131)
..++++|+||||+|+|+|+++++.+++.+.+..++++|++|+ .|++||||+ +|+++.|+. .++.+ .|.+
T Consensus 19 ~~~~~~k~iVIKiGGs~l~~~~~~~~~~~~i~~~a~~i~~l~-~g~~vVlVhGgG~~~~~~~~~~~g~~~~~~~~~~~l~ 97 (256)
T 2va1_A 19 SHMMRKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKIS-KKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMA 97 (256)
T ss_dssp ----CCSEEEEEECGGGGCSSTTCSSCHHHHHHHHHHHHHHT-TTSEEEEEECCTTTCCHHHHHHTTCCHHHHHHHHHHH
T ss_pred hhhhhcCEEEEEechhhccCCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEECCcHHhccchHHHcCCCCCchhHHHHHH
Confidence 457788999999999999976445699999999999999999 999999999 699988853 55421 1111
Q ss_pred ----hHH-HhhhccCC-------CcccccccCcchhhh
Q psy11676 93 ----LSM-RETLSPKD-------HSRSNHFDSENPKTN 118 (131)
Q Consensus 93 ----~~~-~qalaa~~-------llT~~Df~~r~r~~N 118 (131)
... .++|...| ++|..+|.++ |.|
T Consensus 98 ~~~n~~l~~~~l~~~Gi~a~~~~~~t~~~~~~~--~~~ 133 (256)
T 2va1_A 98 TIINGLALENALNHLNVNTIVLSAIKCDKLVHE--SSA 133 (256)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEESSCCTTTCEE--CCH
T ss_pred HHHHHHHHHHHHHHcCCCeEEEeeeecccccch--hhH
Confidence 112 45566655 3578888765 555
No 8
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=99.14 E-value=5e-11 Score=97.12 Aligned_cols=49 Identities=16% Similarity=0.288 Sum_probs=44.8
Q ss_pred CeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc--hHHHhhhhcc
Q psy11676 29 RRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG--AVAFGKQKLA 86 (131)
Q Consensus 29 krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG--AVaaG~~~L~ 86 (131)
|+||||+|+++|++. +..++++|+.|++.|++||||+|| +|..++..++
T Consensus 37 k~iVIKiGGs~l~~~---------~~~l~~dIa~L~~~G~~vVlVhgGg~~i~~~l~~lg 87 (279)
T 3l86_A 37 DIIVIKIGGVASQQL---------SGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQ 87 (279)
T ss_dssp CEEEEEECTTGGGSC---------CHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTT
T ss_pred ceEEEEEChHHHHhH---------HHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHHHcC
Confidence 799999999999742 368899999999999999999999 8999999998
No 9
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=99.10 E-value=2e-10 Score=89.02 Aligned_cols=60 Identities=20% Similarity=0.287 Sum_probs=52.5
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc-chHHHhhh--hcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS-GAVAFGKQ--KLA 86 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS-GAVaaG~~--~L~ 86 (131)
++++||||+|+|+|+++++.+++.+.+..++++|+.|++.|++||||+| |+++.|+. .++
T Consensus 6 ~~~~iViK~GGs~l~~~~~~~~~~~~~~~~~~~i~~l~~~g~~vviV~GgG~~~~g~~~~~~~ 68 (239)
T 1ybd_A 6 KYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGS 68 (239)
T ss_dssp SCSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHTT
T ss_pred CCCEEEEEEchHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhchhHHHcC
Confidence 4789999999999997644568999999999999999999999999998 59999963 555
No 10
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=99.00 E-value=3.7e-10 Score=88.56 Aligned_cols=60 Identities=23% Similarity=0.317 Sum_probs=51.6
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc-hHHHhh--hhcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG-AVAFGK--QKLA 86 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG-AVaaG~--~~L~ 86 (131)
++++||||+|+|+|+++++++++.+.+..++++|+.|++.|++||||+|| +++.|+ ..++
T Consensus 7 ~~k~iViKlGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vVlVhGgG~~~~~~~~~~~g 69 (247)
T 2a1f_A 7 IYKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAG 69 (247)
T ss_dssp SCSEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCCHHHHHTT
T ss_pred cccEEEEEEChhhhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCChHhcchhHHHcC
Confidence 47899999999999975445689999999999999999999999999976 887776 3544
No 11
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=98.99 E-value=4.9e-10 Score=88.53 Aligned_cols=60 Identities=18% Similarity=0.318 Sum_probs=50.6
Q ss_pred HhhccCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc-hHHHhh
Q psy11676 23 GQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG-AVAFGK 82 (131)
Q Consensus 23 ~~l~~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG-AVaaG~ 82 (131)
..+...+++|||+|+|+|+++++++++.+.+..++++|+.|++.|++||||+|| +++.|.
T Consensus 7 ~~~~~~~~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vViV~GgG~~~~~~ 67 (255)
T 2jjx_A 7 HHMRPYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGH 67 (255)
T ss_dssp ---CBCSEEEEEECGGGTSCSSSCSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHH
T ss_pred cccccCCEEEEEECHHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECchHHHhhh
Confidence 347889999999999999975445799999999999999999999999999999 664454
No 12
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=98.96 E-value=7.1e-10 Score=87.26 Aligned_cols=55 Identities=20% Similarity=0.248 Sum_probs=46.4
Q ss_pred HhhccCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc-chHHHh
Q psy11676 23 GQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS-GAVAFG 81 (131)
Q Consensus 23 ~~l~~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS-GAVaaG 81 (131)
..++++|+||||+|+|+|+++ . ++.+.+..++++|+.|++ |++||||+| |+++.|
T Consensus 14 ~~~~~~k~iViKlGGs~l~~~--~-~~~~~i~~~~~~i~~l~~-g~~vViV~GgG~~~~~ 69 (244)
T 2brx_A 14 VPRGSHMRIVFDIGGSVLVPE--N-PDIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARK 69 (244)
T ss_dssp -----CCEEEEEECHHHHCSS--S-CCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHH
T ss_pred hhhhcccEEEEEechhhcCCC--C-CCHHHHHHHHHHHHHHhC-CCeEEEEECccHHHhc
Confidence 356778999999999999965 2 899999999999999999 999999998 689888
No 13
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=98.92 E-value=2e-09 Score=86.37 Aligned_cols=99 Identities=16% Similarity=0.161 Sum_probs=70.2
Q ss_pred CCeEEEEeCccccccCC-CCCCcHHHHHHHHHHHHHHHhCC------CeEEEEccc-hHHHh-hhhcccc-c---cCC--
Q psy11676 28 ARRLVVKLGSAVITRED-EHGLALGRLASIVEQVAECHLEG------RECIMVTSG-AVAFG-KQKLAQE-L---LMS-- 92 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~-~~~l~~~~l~~l~~qIa~L~~~G------~eVILVSSG-AVaaG-~~~L~~~-~---l~~-- 92 (131)
.+.||||+|+++|++++ .+++|.+.|..|+++|++|+..| +++|||++| +++.+ ++.++.+ . +..
T Consensus 6 ~m~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~i~~l~~~G~~~~~~~~vVlVhGGG~~~~~~~~~lgi~~~~~~~~~~~ 85 (266)
T 3k4o_A 6 SMLTILKLGGSILSDKNVPYSIKWDNLERIAMEIKNALDYYKNQNKEIKLILVHGGGAFGHPVAKKYLKIEDGKKIFINM 85 (266)
T ss_dssp -CEEEEEECTTSSCCTTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHHHHHGGGEEECSSSEEECCH
T ss_pred ceEEEEEEchHHeeCCCccCCcCHHHHHHHHHHHHHHHhccccccCCCCEEEEeCchHHHHHHHHHcCCCcccCcccccc
Confidence 45799999999999752 35699999999999999999988 999999999 88888 6666632 2 111
Q ss_pred ---------------hHHHhhhccCCC----cccccccCcc--hhhhHHhHHHHhh
Q psy11676 93 ---------------LSMRETLSPKDH----SRSNHFDSEN--PKTNIYTHIILMF 127 (131)
Q Consensus 93 ---------------~~~~qalaa~~l----lT~~Df~~r~--r~~Na~nTi~~~~ 127 (131)
..+.++|..+|+ ++..|+.... ++.| .++|.-++
T Consensus 86 ~~G~r~T~~a~~~ln~~l~~~l~~~G~~a~~l~~~d~~~~~~g~~v~-~~~i~~lL 140 (266)
T 3k4o_A 86 EKGFWEIQRAMRRFNNIIIDTLQSYDIPAVSIQPSSFVVFGDKLIFD-TSAIKEML 140 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEECGGGTCEESSSCBCC-CHHHHHHH
T ss_pred cCceeHHHHHHHHHHHHHHHHHHHCCCcEEEeeHHHcCcccCceEec-HHHHHHHH
Confidence 123335655664 3566665443 5666 66666554
No 14
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=98.85 E-value=1.6e-09 Score=90.51 Aligned_cols=63 Identities=16% Similarity=0.135 Sum_probs=45.2
Q ss_pred hHhhccCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc-----hHHHhhhhcc
Q psy11676 22 RGQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG-----AVAFGKQKLA 86 (131)
Q Consensus 22 r~~l~~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG-----AVaaG~~~L~ 86 (131)
+.+.+.+||||||+|+|.|+++. ....+.+..+|++|+.|++.|++||||++| ++..++..++
T Consensus 18 ~~d~K~MkRIVIklGGnAL~~~~--~~q~~~~~~~a~~Ia~L~~~G~~vVvVHGgGPQVG~i~~~l~~~~ 85 (332)
T 4axs_A 18 DDDDKHMSRIVIALGGNALGDNP--SQQKELVKIPAAKIAALIQEGHEVIVGHGNGPQVGMIFNAFADAK 85 (332)
T ss_dssp --------CEEEEECGGGGCSSH--HHHHHHTHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHTT
T ss_pred cccccCcceEEEEEChhhcCCCh--HHHHHHHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHhc
Confidence 45678999999999999998642 245677889999999999999999999994 5666665554
No 15
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1
Probab=98.79 E-value=5.4e-09 Score=85.46 Aligned_cols=59 Identities=19% Similarity=0.329 Sum_probs=50.1
Q ss_pred CCeEEEEeCccccccCCC---CCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHHHhhhhcc
Q psy11676 28 ARRLVVKLGSAVITREDE---HGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKLA 86 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~---~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVaaG~~~L~ 86 (131)
.|+||||+|+|+|+++++ .+++.+.+..++++|+.|++.|++||||+||+..+|...++
T Consensus 2 ~k~iViK~GGsal~~~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~i~~~l~~ 63 (314)
T 1e19_A 2 GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLH 63 (314)
T ss_dssp CCEEEEECCGGGTCCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHH
T ss_pred CCEEEEEEChHHhcCCCCccchhhhHHHHHHHHHHHHHHHHCCCeEEEEeCChHHHhHHHHh
Confidence 479999999999996541 12577899999999999999999999999999999965554
No 16
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=98.76 E-value=6.4e-09 Score=84.16 Aligned_cols=53 Identities=21% Similarity=0.279 Sum_probs=47.9
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc--hHHHhhhhcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG--AVAFGKQKLA 86 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG--AVaaG~~~L~ 86 (131)
..++||||+|+++|+++ ..+..++++|+.|++.|++||||+|| +|+.++..++
T Consensus 25 ~~k~iVIKlGGs~l~~~-------~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g 79 (300)
T 2buf_A 25 VGKTLVIKYGGNAMESE-------ELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLS 79 (300)
T ss_dssp TTCEEEEEECCTTTTSS-------HHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTT
T ss_pred cCCeEEEEECchhhCCc-------hHHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcC
Confidence 36899999999999864 37789999999999999999999999 9999998887
No 17
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=98.75 E-value=8.2e-09 Score=84.34 Aligned_cols=61 Identities=13% Similarity=0.236 Sum_probs=48.7
Q ss_pred ccCCeEEEEeCccccccCCC-CCC--cHHHHHHHHHHHHHHHhCCCeEEEEccchHHHh--hhhcc
Q psy11676 26 KYARRLVVKLGSAVITREDE-HGL--ALGRLASIVEQVAECHLEGRECIMVTSGAVAFG--KQKLA 86 (131)
Q Consensus 26 ~~~krIVIKiGSs~Lt~~~~-~~l--~~~~l~~l~~qIa~L~~~G~eVILVSSGAVaaG--~~~L~ 86 (131)
+..++||||+|+|+|++++. +.+ +.+.+..++++|+.|++.|++||||++|+..+| +..++
T Consensus 2 ~~~~~iVIKlGGs~l~~~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~~~~~~ 67 (316)
T 2e9y_A 2 DSGRLAVIALGGNAIAGPGMDVSVESQTAAVKRASSIIADVLADGWRSVITHGNGPQVGYLSEAFE 67 (316)
T ss_dssp --CCEEEEECCHHHHSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHH
T ss_pred CCCCEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCEEEEEcCCcHHHhHHHHHcC
Confidence 34689999999999995431 222 347999999999999999999999999999999 34444
No 18
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=98.73 E-value=7.5e-09 Score=83.49 Aligned_cols=59 Identities=22% Similarity=0.354 Sum_probs=46.5
Q ss_pred cCCeEEEEeCccccccCC-CCCCcHHHHHHHHHHHHHHHhCCC-eEEEEccchHHHhhhhcc
Q psy11676 27 YARRLVVKLGSAVITRED-EHGLALGRLASIVEQVAECHLEGR-ECIMVTSGAVAFGKQKLA 86 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~-~~~l~~~~l~~l~~qIa~L~~~G~-eVILVSSGAVaaG~~~L~ 86 (131)
..++||||+|+|+|++++ .++++.+.+..++++|+.|++.|+ +|||| ||+...|...+.
T Consensus 22 ~~~~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~Ia~l~~~G~~~vViV-hGgG~~~~~~l~ 82 (286)
T 3d40_A 22 TPDFLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAETYRGRMVLI-SGGGAFGHGAIR 82 (286)
T ss_dssp CCSEEEEEECGGGTBCTTSTTCBCHHHHHHHHHHHHHHHHHTTTSEEEE-ECCCCC------
T ss_pred CCCEEEEEeCchHhCCCcccccchHHHHHHHHHHHHHHHHcCCCeEEEE-ECCHHHHHHHHH
Confidence 346999999999999763 246999999999999999999999 59999 899999988875
No 19
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=98.70 E-value=7.3e-09 Score=85.04 Aligned_cols=54 Identities=19% Similarity=0.254 Sum_probs=48.1
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc--hHHHhhhhccc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG--AVAFGKQKLAQ 87 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG--AVaaG~~~L~~ 87 (131)
..++||||+|+|+|+++ ..+..++++|+.|++.|++||||+|| +++.++..++.
T Consensus 48 ~~k~iVIKlGGs~l~~~-------~~~~~l~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~ 103 (321)
T 2v5h_A 48 AGRTVVVKYGGAAMKQE-------ELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGI 103 (321)
T ss_dssp TTCEEEEEECTHHHHSH-------HHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTC
T ss_pred CCCeEEEEECchhhCCc-------hHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC
Confidence 36899999999999863 47789999999999999999999999 99999888873
No 20
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=98.68 E-value=9.4e-09 Score=81.94 Aligned_cols=52 Identities=19% Similarity=0.390 Sum_probs=46.8
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc--hHHHhhhhcc
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG--AVAFGKQKLA 86 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG--AVaaG~~~L~ 86 (131)
.+++|||+|+|+|+++ ..+..++++|+.|++.|++||||+|| +++.++..++
T Consensus 21 ~~~iViKlGGs~l~~~-------~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~~ 74 (282)
T 2bty_A 21 GKTFVIKFGGSAMKQE-------NAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLG 74 (282)
T ss_dssp TCEEEEEECSHHHHSH-------HHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHT
T ss_pred CCeEEEEECchhhCCh-------hHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcC
Confidence 6899999999999853 47889999999999999999999999 8888888777
No 21
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=98.66 E-value=2.3e-08 Score=80.60 Aligned_cols=53 Identities=19% Similarity=0.227 Sum_probs=47.5
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc--hHHHhhhhcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG--AVAFGKQKLA 86 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG--AVaaG~~~L~ 86 (131)
..+++|||+|+|+|+++ ..+..++++|+.|++.|++||||+|| +++.++..++
T Consensus 24 ~~k~iViKlGGs~l~~~-------~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~ 78 (299)
T 2ap9_A 24 HGKVVVVKYGGNAMTDD-------TLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLG 78 (299)
T ss_dssp TTCEEEEEECTHHHHSH-------HHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHT
T ss_pred CCCeEEEEECchhhCCc-------hHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcC
Confidence 36899999999999854 37789999999999999999999999 9998888877
No 22
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=98.63 E-value=5e-08 Score=74.68 Aligned_cols=46 Identities=17% Similarity=0.371 Sum_probs=41.5
Q ss_pred CeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc-chHHHh
Q psy11676 29 RRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS-GAVAFG 81 (131)
Q Consensus 29 krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS-GAVaaG 81 (131)
+++|||+|+|+|+++ .+.+..++++|+.|++ |++||||+| |+++.+
T Consensus 1 ~~iViK~GGs~l~~~------~~~~~~~~~~i~~l~~-g~~vvlV~ggG~~~~~ 47 (219)
T 2ij9_A 1 MKVVLSLGGSVLSNE------SEKIREFAKTIESVAQ-QNQVFVVVGGGKLARE 47 (219)
T ss_dssp CEEEEEECSSTTTTC------HHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHH
T ss_pred CeEEEEeChhhhCCh------HHHHHHHHHHHHHHcC-CCEEEEEECcchHhcc
Confidence 589999999999863 6689999999999999 999999998 688888
No 23
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=98.62 E-value=6.7e-08 Score=78.47 Aligned_cols=52 Identities=17% Similarity=0.285 Sum_probs=46.2
Q ss_pred CCeEEEEeCccccccCCCCCCcH----HHHHHHHHHHHHHHhCCCeEEEEccchHHHhh
Q psy11676 28 ARRLVVKLGSAVITREDEHGLAL----GRLASIVEQVAECHLEGRECIMVTSGAVAFGK 82 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~----~~l~~l~~qIa~L~~~G~eVILVSSGAVaaG~ 82 (131)
.|+||||+|+|+|++ + +.+. +.+..++++|+.|++.|++||||++|+..+|.
T Consensus 2 ~k~iVIKlGGs~l~~-~--~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~ 57 (310)
T 2we5_A 2 GKKMVVALGGNAILS-N--DASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGN 57 (310)
T ss_dssp CCEEEEECCGGGGCC-S--SCSHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHH
T ss_pred CcEEEEEEChHHhcC-C--CCChHHHHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhH
Confidence 379999999999997 3 2443 78999999999999999999999999999995
No 24
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=98.62 E-value=5.5e-08 Score=74.94 Aligned_cols=49 Identities=16% Similarity=0.250 Sum_probs=44.1
Q ss_pred CeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc-chHHHhh
Q psy11676 29 RRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS-GAVAFGK 82 (131)
Q Consensus 29 krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS-GAVaaG~ 82 (131)
+++|||+|.|+|+++ +.+.+..++++|+.|++.|++||||+| |+++.+.
T Consensus 1 ~~iViK~GGs~l~~~-----~~~~~~~~~~~i~~l~~~g~~vvlV~ggG~~~~~~ 50 (226)
T 2j4j_A 1 MNIILKISGKFFDED-----NVDNLIVLRQSIKELADNGFRVGIVTGGGSTARRY 50 (226)
T ss_dssp CEEEEEECTHHHHTC-----CHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHH
T ss_pred CeEEEEeccccccCC-----CHHHHHHHHHHHHHHHhCCCeEEEEECcchHhchh
Confidence 489999999999864 578999999999999999999999999 6998884
No 25
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=98.58 E-value=4.3e-08 Score=79.06 Aligned_cols=52 Identities=25% Similarity=0.305 Sum_probs=47.0
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc--hHHHhhhhcc
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG--AVAFGKQKLA 86 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG--AVaaG~~~L~ 86 (131)
.|+||||+|.|+|+++ ..+..++++|+.|++.|++||||+|| +++.++..++
T Consensus 36 ~k~iVIKlGGs~l~~~-------~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~ 89 (298)
T 2rd5_A 36 GKTIVVKYGGAAMTSP-------ELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLN 89 (298)
T ss_dssp TCEEEEEECTHHHHCH-------HHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTT
T ss_pred CCEEEEEECchhhCCh-------hHHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcC
Confidence 6899999999999853 47789999999999999999999999 8888888877
No 26
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=98.52 E-value=9.6e-08 Score=76.66 Aligned_cols=89 Identities=13% Similarity=0.225 Sum_probs=60.9
Q ss_pred eEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHHHhhhhccccccCChHHHhhhcc--------
Q psy11676 30 RLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKLAQELLMSLSMRETLSP-------- 101 (131)
Q Consensus 30 rIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVaaG~~~L~~~~l~~~~~~qalaa-------- 101 (131)
+||||+|+| |+++ + .+.+..++++|+.|+ .|++||||+||. +.|...++...+..+.. ++++.
T Consensus 41 ~iVIKiGGs-l~~~--~---~~~l~~l~~~I~~l~-~G~~vVlV~GGg-~~~~~~~~~~~~~gl~~-~~l~~v~~~~~~~ 111 (276)
T 2ogx_A 41 LQVVKIGGR-VMDR--G---ADAILPLVEELRKLL-PEHRLLILTGAG-VRARHVFSVGLDLGLPV-GSLAPLAASEAGQ 111 (276)
T ss_dssp EEEEEECHH-HHTT--T---HHHHHHHHHHHHHHT-TTCEEEEEECCT-HHHHHHHHHHHHTTCCH-HHHHHHHHHHHHH
T ss_pred eEEEEEChh-hcCC--C---HHHHHHHHHHHHHHh-CCCeEEEEECcH-HHHHHHHhccCcCCCCH-HHHHHHHHHHHHH
Confidence 899999999 8854 2 688999999999999 899999999886 77877665322221110 01111
Q ss_pred -----CCCcccccccCcchhhhHHhHHHHhhh
Q psy11676 102 -----KDHSRSNHFDSENPKTNIYTHIILMFV 128 (131)
Q Consensus 102 -----~~llT~~Df~~r~r~~Na~nTi~~~~~ 128 (131)
+.+++..++. ...+.|..++|+.++.
T Consensus 112 n~~l~~~ll~~~g~~-~v~~~~~~~~i~~lL~ 142 (276)
T 2ogx_A 112 NGHILAAMLASEGVS-YVEHPTVADQLAIHLS 142 (276)
T ss_dssp HHHHHHHHHGGGTCC-BCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-cccccChHHHHHHHHh
Confidence 1133556663 3467888888887653
No 27
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=98.49 E-value=1.4e-07 Score=79.09 Aligned_cols=51 Identities=8% Similarity=0.135 Sum_probs=43.4
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHHHh--hhhcc
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG--KQKLA 86 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVaaG--~~~L~ 86 (131)
.|+||||+|+|+|++++ +..++++|+.|++.|++||||+||+..+| +..++
T Consensus 43 ~~~iViK~GG~~l~~~~--------~~~~~~~i~~l~~~g~~vvlVhggg~~~~~~~~~~~ 95 (456)
T 3d2m_A 43 GTTLVAGIDGRLLEGGT--------LNKLAADIGLLSQLGIRLVLIHGAYHFLDRLAAAQG 95 (456)
T ss_dssp TCEEEEEECGGGGTSTH--------HHHHHHHHHHHHHTTCEEEEEECCHHHHHTTTTTTT
T ss_pred CCEEEEEEChHHhcCch--------HHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHCC
Confidence 68999999999998641 67999999999999999999999998865 44444
No 28
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=98.49 E-value=8e-08 Score=76.63 Aligned_cols=44 Identities=11% Similarity=0.266 Sum_probs=39.8
Q ss_pred CeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 29 RRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 29 krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
+++|||+|+|+|+++ + .+.+..++++|+.|++. ++||||+||+.
T Consensus 37 ~~iVIKlGGs~l~~~--~---~~~~~~la~~I~~l~~~-~~vVlVhGGg~ 80 (270)
T 2ogx_B 37 DATVIKIGGQSVIDR--G---RAAVYPLVDEIVAARKN-HKLLIGTGAGT 80 (270)
T ss_dssp TEEEEEECTTTTGGG--C---HHHHHHHHHHHHHHTTT-CEEEEEECCCH
T ss_pred CeEEEEechHHhCCC--C---HHHHHHHHHHHHHHhcC-CcEEEEECChH
Confidence 389999999999974 2 67899999999999987 99999999998
No 29
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=98.41 E-value=6.9e-08 Score=85.42 Aligned_cols=47 Identities=15% Similarity=0.237 Sum_probs=40.2
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHHHh
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVaaG 81 (131)
++++|+|+|+++|+++ +++..++++|+.+++.|++|++|+||+-...
T Consensus 1 m~~iViK~GGssl~~~-------~~i~~va~~i~~~~~~g~~vvvV~sa~G~~t 47 (600)
T 3l76_A 1 MALIVQKFGGTSVGTV-------ERIQAVAQRIKRTVQGGNSLVVVVSAMGKST 47 (600)
T ss_dssp -CEEEEEECSGGGSSH-------HHHHHHHHHHHHHHHTTCEEEEEECCSSTHH
T ss_pred CceEEEEeCCCCcCCH-------HHHHHHHHHHHHHHHCCCcEEEEECCCcHHH
Confidence 4789999999999853 5899999999999999999999999944443
No 30
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A*
Probab=98.28 E-value=5.2e-07 Score=71.25 Aligned_cols=53 Identities=25% Similarity=0.339 Sum_probs=42.7
Q ss_pred cCCeEEEEeCccccccCC-CCCCcHHHHHHHHHHHHHHHhCCCeEE-EEccchHHHhhhh
Q psy11676 27 YARRLVVKLGSAVITRED-EHGLALGRLASIVEQVAECHLEGRECI-MVTSGAVAFGKQK 84 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~-~~~l~~~~l~~l~~qIa~L~~~G~eVI-LVSSGAVaaG~~~ 84 (131)
++|+||||+|.++|++++ .++++.+.+..++++|+. |+++| ||++| ...|...
T Consensus 2 ~~k~iViKiGG~~l~~~~~~~~l~~~~l~~l~~~i~~----G~~vv~lVhGG-G~~~~~~ 56 (249)
T 3ll5_A 2 PFTMMILKIGGSVITDKSAYRTARTYAIRSIVKVLSG----IEDLVCVVHGG-GSFGHIK 56 (249)
T ss_dssp --CCEEEEECHHHHBCTTSTTCBCHHHHHHHHHHHHT----CTTEEEEEECC-GGGTHHH
T ss_pred CceEEEEEECccEEecCcccccchHHHHHHHHHHHhc----CCceEEEEECc-cHHHHHH
Confidence 378999999999999753 245999999999999985 99999 99999 4445544
No 31
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=98.15 E-value=2.5e-06 Score=67.69 Aligned_cols=47 Identities=23% Similarity=0.347 Sum_probs=39.7
Q ss_pred eEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHHHh--hhhcc
Q psy11676 30 RLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFG--KQKLA 86 (131)
Q Consensus 30 rIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVaaG--~~~L~ 86 (131)
++|||+|.++|+ .+..++++|+.|++.|++||||.||....+ +..++
T Consensus 1 ~iViKlGGs~l~----------~~~~~~~~i~~l~~~G~~vViVhGgg~~~~~~~~~~~ 49 (269)
T 2egx_A 1 MIVVKVGGAEGI----------NYEAVAKDAASLWKEGVKLLLVHGGSAETNKVAEALG 49 (269)
T ss_dssp CEEEEECCSTTC----------CHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHTT
T ss_pred CEEEEECHHHHH----------HHHHHHHHHHHHHHCCCeEEEEECChHHHHHHHHHcC
Confidence 589999999986 568899999999999999999999997443 45554
No 32
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=98.10 E-value=2.1e-06 Score=72.32 Aligned_cols=52 Identities=17% Similarity=0.288 Sum_probs=45.0
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHHHhhhhcc
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVAFGKQKLA 86 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVaaG~~~L~ 86 (131)
++++|+|+|.++|++ .+.+..++++|+.+++.|+++|+|.||+.+.+...+.
T Consensus 1 m~~iViK~GGssl~~-------~~~i~~v~~~i~~l~~~g~~~vvV~sa~g~~~~~ll~ 52 (421)
T 3ab4_A 1 MALVVQKYGGSSLES-------AERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLE 52 (421)
T ss_dssp -CEEEEEECSGGGSS-------HHHHHHHHHHHHHHHHTTCEEEEEECCSTTHHHHHHH
T ss_pred CCeEEEEEChhHhCC-------HHHHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH
Confidence 478999999999984 4588999999999999999999999988777766665
No 33
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=97.71 E-value=3.9e-05 Score=60.07 Aligned_cols=43 Identities=19% Similarity=0.404 Sum_probs=36.8
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCe-EEEEccch
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRE-CIMVTSGA 77 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~e-VILVSSGA 77 (131)
++++|||+|.++++++ +.+..++++|+.+++.|.+ ||+||.|.
T Consensus 2 m~~~ViK~GGs~l~~~-------~~~~~~~~~i~~l~~~g~~~vVvV~Ggg 45 (258)
T 1gs5_A 2 MNPLIIKLGGVLLDSE-------EALERLFSALVNYRESHQRPLVIVHGGG 45 (258)
T ss_dssp CCCEEEEECGGGGGCH-------HHHHHHHHHHHHHHTTCCSCEEEEECCH
T ss_pred CccEEEEEChhHhCCh-------HHHHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 4689999999999853 4789999999999887665 89999998
No 34
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=97.62 E-value=4.2e-05 Score=61.01 Aligned_cols=47 Identities=23% Similarity=0.453 Sum_probs=40.2
Q ss_pred CCeEEEEeCccccccCCC-CC-CcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 28 ARRLVVKLGSAVITREDE-HG-LALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~-~~-l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
.|++|||+|.++|++++. .+ ++.+.+.+|+++|+.|+ |.++|||..|
T Consensus 2 ~k~iVIKlGG~~l~~~~~~~~~~~~~~l~~l~~~i~~l~--~~~~vlVhGG 50 (269)
T 3ll9_A 2 SHMIILKLGGSVITRKDSEEPAIDRDNLERIASEIGNAS--PSSLMIVHGA 50 (269)
T ss_dssp -CCEEEEECHHHHEECCSSSCEECHHHHHHHHHHHHHHC--CSSEEEEECC
T ss_pred CCEEEEEEChhheecCccccccccHHHHHHHHHHHHHhc--CCCEEEEECC
Confidence 589999999999997641 23 89999999999999986 6899999988
No 35
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803}
Probab=96.24 E-value=0.0074 Score=50.35 Aligned_cols=52 Identities=12% Similarity=0.280 Sum_probs=39.6
Q ss_pred ccCCeEEEEeCccccccCCCC-C--CcHHHHHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 26 KYARRLVVKLGSAVITREDEH-G--LALGRLASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 26 ~~~krIVIKiGSs~Lt~~~~~-~--l~~~~l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
.+.|||||++|-+.|....+. . .....+...|++|++|.+.||+|+|+=.+-
T Consensus 3 ~~~~~ivvalgGnal~~~g~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnG 57 (317)
T 3kzf_A 3 SAGKTVVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNG 57 (317)
T ss_dssp CCCCEEEEECCSTTTC--CCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCH
T ss_pred CCCCEEEEEcChhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCc
Confidence 456899999999988753211 2 234567889999999999999999999873
No 36
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A*
Probab=95.74 E-value=0.012 Score=48.25 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=34.7
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
.+.+|||+|-+++++. +..++++|+.|+..|.++|||-.|
T Consensus 48 ~~~iViK~GGsv~~~~---------~~~~~~dI~~l~~~G~~~VvVHGg 87 (307)
T 3zzh_A 48 QQFAVIKVGGAIISDN---------LHELASCLAFLYHVGLYPIVLHGT 87 (307)
T ss_dssp SCCEEEEECHHHHHHS---------HHHHHHHHHHHHHBTCCEEEEECC
T ss_pred CCEEEEEEChHHhhch---------HHHHHHHHHHHHHCCCCEEEEECC
Confidence 4789999999877742 579999999999999999999877
No 37
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=94.82 E-value=0.012 Score=50.88 Aligned_cols=40 Identities=30% Similarity=0.429 Sum_probs=33.9
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
.+.+|||+|-+++++. +..++++|+.|+..|.++|||-.|
T Consensus 58 ~~~iViK~GGsv~~~~---------l~~~a~dI~~l~~~G~~~VvVHGg 97 (460)
T 3s6g_A 58 ERFAVIKVGGAVIQDD---------LPGLASALAFLQTVGLTPVVVHGG 97 (460)
T ss_dssp GGSEEEEECHHHHHHC---------HHHHHHHHHHHHHHTCCCEEEECC
T ss_pred CCEEEEEEChHHhhhH---------HHHHHHHHHHHHHCCCcEEEEECC
Confidence 3799999999866531 589999999999999999999866
No 38
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A*
Probab=94.19 E-value=0.03 Score=48.62 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=33.8
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
.+.+|||+|-+++++. +..++++|+.|+..|.++|||--|
T Consensus 48 ~~~iVIK~GGsv~~~~---------l~~la~dI~~l~~~G~~~VvVHGg 87 (464)
T 4ab7_A 48 QQFAVIKVGGAIISDN---------LHELASCLAFLYHVGLYPIVLHGT 87 (464)
T ss_dssp -CCEEEEECHHHHHHC---------HHHHHHHHHHHHHTTCCCEEEECC
T ss_pred CceEEEEECHHHhhch---------HHHHHHHHHHHHHCCCeEEEEECC
Confidence 4679999999987642 578999999999999999999855
No 39
>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}
Probab=92.96 E-value=0.015 Score=50.44 Aligned_cols=39 Identities=26% Similarity=0.355 Sum_probs=33.1
Q ss_pred CeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 29 RRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 29 krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
+.+|||+|-+++.+. +..++++|+.|++.|.++|||-+|
T Consensus 62 ~~iViK~GG~v~~~~---------l~~va~dI~~l~~~G~~~VvVHGg 100 (467)
T 3s6k_A 62 RFAVVKVGGAVLRDD---------LEALTSSLSFLQEVGLTPIVLHGA 100 (467)
T ss_dssp TSCCCCCCHHHHTTC---------CHHHHHHHHHHHTTSCCCCCCCCC
T ss_pred cEEEEEEChHHhhhH---------HHHHHHHHHHHHHCCCcEEEEECC
Confidence 789999999855521 489999999999999999998876
No 40
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=80.25 E-value=1.5 Score=37.23 Aligned_cols=40 Identities=18% Similarity=0.322 Sum_probs=29.8
Q ss_pred eEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCC-eEEEEccch
Q psy11676 30 RLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGR-ECIMVTSGA 77 (131)
Q Consensus 30 rIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~-eVILVSSGA 77 (131)
.+|.|+|-+++.+. +.+...++-|... +.|+ ++++|-|.-
T Consensus 2 ~~V~KFGGtSv~~~-------~~i~~va~ii~~~-~~~~~~~vVVvSA~ 42 (473)
T 3c1m_A 2 TTVMKFGGTSVGSG-------ERIRHVAKIVTKR-KKEDDDVVVVVSAM 42 (473)
T ss_dssp CEEEEECTTTTSSH-------HHHHHHHHHHHHH-HTTCSCEEEEECCS
T ss_pred CEEEEeCCcccCCH-------HHHHHHHHHHHHh-hcCCCCEEEEEcCC
Confidence 47999998888754 4777888877665 6788 877777753
No 41
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=77.76 E-value=4.4 Score=26.17 Aligned_cols=29 Identities=7% Similarity=0.029 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 50 LGRLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 50 ~~~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
........+.+..|+++|+++.++|++.-
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~ 45 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPG 45 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCH
Confidence 44557788889999999999999999753
No 42
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=67.42 E-value=4.8 Score=34.91 Aligned_cols=41 Identities=15% Similarity=0.274 Sum_probs=27.5
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
..+.+|.|+|-+++.+. +.+...++-|... .++++++|-|.
T Consensus 25 ~~~~~V~KFGGTSva~~-------e~i~~va~iI~~~--~~~~~vVVVSA 65 (510)
T 2cdq_A 25 KGITCVMKFGGSSVASA-------ERMKEVADLILTF--PEESPVIVLSA 65 (510)
T ss_dssp CCCCEEEEECTGGGSSH-------HHHHHHHHHHHHC--TTCCEEEEECC
T ss_pred CCCeEEEEECCcccCCH-------HHHHHHHHHHHhc--cCCCEEEEEcC
Confidence 45779999998888754 4677777777532 34565555554
No 43
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=64.95 E-value=4.1 Score=34.57 Aligned_cols=39 Identities=15% Similarity=0.228 Sum_probs=25.5
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
++.+|.|+|-+++.+. +.+...++-|.. ...++++|-|.
T Consensus 2 m~~~V~KFGGTSv~~~-------e~i~~va~ii~~---~~~~~vVVvSA 40 (449)
T 2j0w_A 2 SEIVVSKFGGTSVADF-------DAMNRSADIVLS---DANVRLVVLSA 40 (449)
T ss_dssp -CCEEEEECSGGGSSH-------HHHHHHHHHHTS---CTTEEEEEECC
T ss_pred CccEEEEECCccCCCH-------HHHHHHHHHHHh---cCCCEEEEeCC
Confidence 4578999998888764 356666666642 34466666654
No 44
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=63.77 E-value=20 Score=25.27 Aligned_cols=52 Identities=15% Similarity=0.110 Sum_probs=37.0
Q ss_pred cCCeEEEEeCccccccCCCCCCcH-HHHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 27 YARRLVVKLGSAVITREDEHGLAL-GRLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~-~~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
+.+.|||=+|++=+........+. .+...+.+.|..+++.|.+||+|+..-+
T Consensus 72 ~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~~~p~ 124 (240)
T 3mil_A 72 NIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIIIGPGLV 124 (240)
T ss_dssp CEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCC
T ss_pred CCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 567799999998764321122344 4456788888888999999999997544
No 45
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=63.51 E-value=6.1 Score=28.02 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
....+.+..|+++|+.+.|||++.-
T Consensus 95 ~g~~~~l~~l~~~g~~~~ivS~~~~ 119 (232)
T 3fvv_A 95 VQAVDVVRGHLAAGDLCALVTATNS 119 (232)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 4566778889999999999998854
No 46
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=63.34 E-value=4.5 Score=34.53 Aligned_cols=37 Identities=11% Similarity=0.294 Sum_probs=26.5
Q ss_pred eEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 30 RLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 30 rIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
-+|.|+|-+++.+. +.|...++-|.+ .|.++++|-|.
T Consensus 4 m~V~KFGGtSva~~-------e~i~~Va~iI~~---~~~~~vVVVSA 40 (446)
T 3tvi_A 4 IVVTKFGGSSLADS-------NQFKKVKGIIDS---DANRKYIIPSA 40 (446)
T ss_dssp CEEEEECGGGGSSH-------HHHHHHHHHHTT---CTTEEEEEECS
T ss_pred cEEEEeCccccCCH-------HHHHHHHHHHHh---cCCCEEEEECC
Confidence 58999999988854 366677766653 46777777664
No 47
>1f2t_B RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_B* 1us8_B*
Probab=63.28 E-value=7.8 Score=27.73 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=30.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-++...++|......+.+.+.++.+.|.-||+||--
T Consensus 86 lLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~ 122 (148)
T 1f2t_B 86 ILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHD 122 (148)
T ss_dssp EEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESC
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHccCCEEEEEECh
Confidence 3455567899999999999999998878888888864
No 48
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=60.70 E-value=29 Score=23.90 Aligned_cols=46 Identities=13% Similarity=0.111 Sum_probs=34.2
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
+.+.|||=+|++=+... .....+...+.+-|..+++.|.+|++|+.
T Consensus 62 ~pd~Vii~~G~ND~~~~---~~~~~~~~~l~~li~~~~~~~~~vil~~~ 107 (190)
T 1ivn_A 62 QPRWVLVELGGNDGLRG---FQPQQTEQTLRQILQDVKAANAEPLLMQI 107 (190)
T ss_dssp CCSEEEEECCTTTTSSS---CCHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEeeccccccC---CCHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 56889999999876532 12234557787888888888999999985
No 49
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=59.33 E-value=16 Score=27.43 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=30.4
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.+.++.++|.-||+||-=
T Consensus 163 lLDEPt~~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd 199 (224)
T 2pcj_A 163 FADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHE 199 (224)
T ss_dssp EEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3466567899999999999999998888888888764
No 50
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=57.68 E-value=17 Score=27.85 Aligned_cols=37 Identities=22% Similarity=0.312 Sum_probs=30.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.+.++.++|.-||+||-=
T Consensus 176 lLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHd 212 (257)
T 1g6h_A 176 VMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHR 212 (257)
T ss_dssp EEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 4466667899999999999999998889988888853
No 51
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=57.25 E-value=18 Score=24.89 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=36.0
Q ss_pred cCCeEEEEeCccccccCCCCCCcH-HHHHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 27 YARRLVVKLGSAVITREDEHGLAL-GRLASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~-~~l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
+.+.|||=+|++=+.... +..+. .+...+.+-|..+++.|.+|+++|..-
T Consensus 74 ~pd~vvi~~G~ND~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p 124 (204)
T 3p94_A 74 KPKAVVILAGINDIAHNN-GVIALENVFGNLVSMAELAKANHIKVIFCSVLP 124 (204)
T ss_dssp CEEEEEEECCHHHHTTTT-SCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred CCCEEEEEeecCcccccc-CCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 457899999999777543 22344 344667777777888999999998643
No 52
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=56.19 E-value=8.6 Score=26.46 Aligned_cols=24 Identities=8% Similarity=0.177 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhCCCeEEEEccch
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
....+.+.+|+++|+.+.++|++.
T Consensus 30 ~g~~~~l~~L~~~g~~~~i~Tn~~ 53 (179)
T 3l8h_A 30 PGSLQAIARLTQADWTVVLATNQS 53 (179)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEECT
T ss_pred cCHHHHHHHHHHCCCEEEEEECCC
Confidence 467788899999999999999986
No 53
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=54.91 E-value=18 Score=27.80 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=31.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.|.++.++|.-||+||-=
T Consensus 176 lLDEPts~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd 212 (262)
T 1b0u_A 176 LFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHE 212 (262)
T ss_dssp EEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSC
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4566667899999999999999998889889888864
No 54
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=54.81 E-value=9.6 Score=29.36 Aligned_cols=28 Identities=18% Similarity=0.232 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 51 GRLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 51 ~~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.-+..-..+|.++|++|.++|+...
T Consensus 34 GHv~P~l~LA~~L~~rGh~Vt~~t~~~~ 61 (400)
T 4amg_A 34 SHILPTVPLAQALRALGHEVRYATGGDI 61 (400)
T ss_dssp HHHGGGHHHHHHHHHTTCEEEEEECSST
T ss_pred hHHHHHHHHHHHHHHCCCEEEEEeCcch
Confidence 3444444444566789999999998753
No 55
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=53.96 E-value=17 Score=28.81 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=30.3
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 41 TREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 41 t~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
-|+...++|......+.+.|.++. +|..||+||-=.
T Consensus 321 LDEpt~~LD~~~~~~l~~~L~~l~-~~~~vi~itH~~ 356 (415)
T 4aby_A 321 FDEVDAGIGGAAAIAVAEQLSRLA-DTRQVLVVTHLA 356 (415)
T ss_dssp ESSTTTTCCHHHHHHHHHHHHHHT-TTSEEEEECSCH
T ss_pred EECCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEeCcH
Confidence 355557899999999999999997 699999999763
No 56
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=53.46 E-value=21 Score=27.70 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=30.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.|.++.++|.-||+||-=
T Consensus 182 lLDEPts~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd 218 (263)
T 2olj_A 182 LFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHE 218 (263)
T ss_dssp EEESTTTTSCHHHHHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4566667899999999999999998888888888864
No 57
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=53.45 E-value=19 Score=27.29 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=30.6
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.+.++.++|.-||+||-=
T Consensus 162 lLDEPts~LD~~~~~~l~~~l~~~~~~g~tvi~vtHd 198 (240)
T 1ji0_A 162 MMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQN 198 (240)
T ss_dssp EEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 4466667899999999999999998888888888864
No 58
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=53.41 E-value=21 Score=27.44 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=30.4
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.+.++.++|.-||+||-=
T Consensus 161 lLDEPts~LD~~~~~~l~~~l~~l~~~g~tii~vtHd 197 (266)
T 2yz2_A 161 ILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILISHD 197 (266)
T ss_dssp EEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEcCccccCCHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 3466667899999999999999998778888888853
No 59
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=53.17 E-value=17 Score=27.47 Aligned_cols=37 Identities=16% Similarity=0.256 Sum_probs=30.4
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhC-CCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLE-GRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~-G~eVILVSSG 76 (131)
|.|+...++|...-..+.+.+.++.++ |.-||+||==
T Consensus 168 llDEPts~LD~~~~~~i~~~l~~l~~~~g~tvi~vtHd 205 (235)
T 3tif_A 168 LADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHD 205 (235)
T ss_dssp EEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEECSC
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 456666789999999999999999765 8989888864
No 60
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=52.92 E-value=29 Score=23.56 Aligned_cols=46 Identities=9% Similarity=0.041 Sum_probs=35.0
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
+.+.|||=+|++=+.... ....+...+.+-|..+++.|.+|++|+.
T Consensus 66 ~pd~vvi~~G~ND~~~~~---~~~~~~~~~~~~i~~~~~~~~~vvl~~~ 111 (185)
T 3hp4_A 66 EPTHVLIELGANDGLRGF---PVKKMQTNLTALVKKSQAANAMTALMEI 111 (185)
T ss_dssp CCSEEEEECCHHHHHTTC---CHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEeecccCCCCc---CHHHHHHHHHHHHHHHHHcCCeEEEEeC
Confidence 678899999998665421 2244557788888888899999999984
No 61
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=52.45 E-value=21 Score=27.61 Aligned_cols=37 Identities=16% Similarity=0.232 Sum_probs=30.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-++...++|...-..+.+.+.++.++|.-||+||-=
T Consensus 169 lLDEPts~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 205 (256)
T 1vpl_A 169 ILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHN 205 (256)
T ss_dssp EEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEeCCccccCHHHHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3466667899999999999999998888888888764
No 62
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=51.07 E-value=11 Score=26.52 Aligned_cols=26 Identities=15% Similarity=0.257 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhCCCeEEEEccchHHH
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGAVAF 80 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGAVaa 80 (131)
...+.+..|+++|+.+.+||++.-..
T Consensus 90 g~~~~l~~L~~~g~~~~i~T~~~~~~ 115 (225)
T 1nnl_A 90 GIRELVSRLQERNVQVFLISGGFRSI 115 (225)
T ss_dssp THHHHHHHHHHTTCEEEEEEEEEHHH
T ss_pred cHHHHHHHHHHCCCcEEEEeCChHHH
Confidence 35567888999999999999986433
No 63
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=50.70 E-value=26 Score=26.90 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=30.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.+.++.++|.-||+||-=
T Consensus 156 lLDEPts~LD~~~~~~l~~~l~~l~~~g~tviivtHd 192 (249)
T 2qi9_C 156 LLDEPMNSLDVAQQSALDKILSALSQQGLAIVMSSHD 192 (249)
T ss_dssp EESSTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4466667899999999999999998778888888754
No 64
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=50.63 E-value=19 Score=27.96 Aligned_cols=24 Identities=17% Similarity=0.230 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhCCCeEEEEccchH
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
.+..-+.+|+++|++|.+++++..
T Consensus 31 ~~~~La~~L~~~GheV~v~~~~~~ 54 (398)
T 4fzr_A 31 PLVPLSWALRAAGHEVLVAASENM 54 (398)
T ss_dssp GGHHHHHHHHHTTCEEEEEEEGGG
T ss_pred HHHHHHHHHHHCCCEEEEEcCHHH
Confidence 344455667789999999998754
No 65
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=49.53 E-value=31 Score=24.57 Aligned_cols=48 Identities=8% Similarity=0.135 Sum_probs=32.9
Q ss_pred cCCeEEEEeCccccccCCCCCCcHH-HHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALG-RLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~-~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
+.+.|||=+|++=+.... +..+.+ ....+..-|..++..|.+|+|+|.
T Consensus 78 ~Pd~vvi~~G~ND~~~~~-~~~~~~~~~~~l~~ii~~~~~~~~~iil~~~ 126 (209)
T 4hf7_A 78 SPALVVINAGTNDVAENT-GAYNEDYTFGNIASMAELAKANKIKVILTSV 126 (209)
T ss_dssp CCSEEEECCCHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEeCCCcCcccc-ccccHHHHHHHHHHhhHHHhccCceEEEEee
Confidence 457899999999765432 223333 345566666677788999999985
No 66
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=49.24 E-value=38 Score=29.09 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=41.0
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
+.||+.|.+=-|+=.++++.=.|..+|.+-.-.|..|.++|-+|||.|-
T Consensus 16 ~gKrVlvRvD~NVP~~~~g~Itdd~RI~aalpTI~~ll~~GakVil~SH 64 (403)
T 3q3v_A 16 AKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASH 64 (403)
T ss_dssp TTCEEEEECCCCCCBCTTCCBSCCHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEeccCCCcCCCCcccChHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 5799999999888765422235888999999999999999999999885
No 67
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=48.96 E-value=12 Score=25.50 Aligned_cols=24 Identities=8% Similarity=-0.092 Sum_probs=19.7
Q ss_pred HHHHHHHHHhCCCeEEEEccchHH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
..+.+..|+++|+.+++||++.-.
T Consensus 41 ~~~~l~~l~~~g~~~~i~T~~~~~ 64 (162)
T 2p9j_A 41 DGIGIKLLQKMGITLAVISGRDSA 64 (162)
T ss_dssp HHHHHHHHHTTTCEEEEEESCCCH
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcH
Confidence 357788899999999999988543
No 68
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=48.74 E-value=19 Score=27.97 Aligned_cols=20 Identities=5% Similarity=0.278 Sum_probs=15.5
Q ss_pred HHHHHHHHHhCCCeEEEEcc
Q psy11676 56 IVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSS 75 (131)
...-..+|.++|++|.++++
T Consensus 37 ~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 37 LIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp GHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEecc
Confidence 34445567789999999998
No 69
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=48.00 E-value=13 Score=26.29 Aligned_cols=25 Identities=12% Similarity=0.109 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 53 LASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 53 l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
+..+.+.+..|+++|+.+.+||++.
T Consensus 36 ~~g~~~~L~~L~~~g~~~~i~Tn~~ 60 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGFKQAILSNTA 60 (189)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCS
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCC
Confidence 3567788899999999999999875
No 70
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=47.75 E-value=13 Score=30.76 Aligned_cols=25 Identities=16% Similarity=0.398 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
....+-|..|++.|++|.|||.|-.
T Consensus 224 p~~~eLi~~L~~~G~~v~IVSgg~~ 248 (385)
T 4gxt_A 224 DEMVDLYRSLEENGIDCYIVSASFI 248 (385)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEH
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCcH
Confidence 3456678889999999999999953
No 71
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=47.70 E-value=17 Score=24.67 Aligned_cols=22 Identities=41% Similarity=0.513 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhCCCeEEEEc-cc
Q psy11676 55 SIVEQVAECHLEGRECIMVT-SG 76 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVS-SG 76 (131)
+.++.+.+..++|+.|+++| +|
T Consensus 67 ~~~~~i~~~~~~G~~V~~l~d~G 89 (117)
T 3hh1_A 67 RAVRQVIELLEEGSDVALVTDAG 89 (117)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETT
T ss_pred HHHHHHHHHHHCCCeEEEEecCC
Confidence 45566666667899999999 67
No 72
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=47.21 E-value=18 Score=28.52 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=30.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-++...++|......+.+.+.++.+.|..|++||--
T Consensus 277 llDEp~~~LD~~~~~~l~~~l~~~~~~~~~vi~~sH~ 313 (339)
T 3qkt_A 277 ILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHD 313 (339)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHTGGGSSEEEEEESC
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEECh
Confidence 4465567899999999999999988888888888754
No 73
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=47.13 E-value=29 Score=26.57 Aligned_cols=37 Identities=11% Similarity=0.157 Sum_probs=30.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhC-CCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLE-GRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~-G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.+.++.++ |.-||+||-=
T Consensus 151 lLDEPts~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd 188 (253)
T 2nq2_C 151 LLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQ 188 (253)
T ss_dssp EESSSSTTSCHHHHHHHHHHHHHHHHTSCCEEEEEESC
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC
Confidence 446656789999999999999999887 8888888754
No 74
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=47.02 E-value=18 Score=29.16 Aligned_cols=38 Identities=13% Similarity=0.108 Sum_probs=31.2
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 39 VITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 39 ~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
+|-|+...++|......+.+.+.++.+.|.-||+||-=
T Consensus 307 lllDEpt~~LD~~~~~~~~~~l~~l~~~g~tvi~itH~ 344 (365)
T 3qf7_A 307 FFIDEGFSSLDTENKEKIASVLKELERLNKVIVFITHD 344 (365)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHGGGGSSSEEEEEESC
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 34466667899999999999999999889988888753
No 75
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=46.87 E-value=20 Score=26.44 Aligned_cols=27 Identities=26% Similarity=0.326 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 51 GRLASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 51 ~~l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
....++++.|.+..++|+.|++++||=
T Consensus 78 ~~~~~~~~~i~~~~~~g~~V~~l~~GD 104 (232)
T 2qbu_A 78 SHWDSAARMVAAELEDGRDVAFITLGD 104 (232)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESBC
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 345678888888888899999999984
No 76
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=46.60 E-value=49 Score=22.91 Aligned_cols=49 Identities=10% Similarity=0.086 Sum_probs=35.6
Q ss_pred CCeEEEEeCccccccCCCCCCc-HHHHHHHHHHHHHHHhCC---------CeEEEEccchH
Q psy11676 28 ARRLVVKLGSAVITREDEHGLA-LGRLASIVEQVAECHLEG---------RECIMVTSGAV 78 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~-~~~l~~l~~qIa~L~~~G---------~eVILVSSGAV 78 (131)
.+.|||=+|++=+.... +.+ ..+...+.+-|..+++.+ .+|++++...+
T Consensus 84 ~d~vvi~~G~ND~~~~~--~~~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p~~ 142 (216)
T 2q0q_A 84 LDLVIIMLGTNDTKAYF--RRTPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPPPL 142 (216)
T ss_dssp CSEEEEECCTGGGSGGG--CCCHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECCCC
T ss_pred CCEEEEEecCcccchhc--CCCHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCCCc
Confidence 48899999999776421 123 345577888888888888 89999976543
No 77
>3e59_A Pyoverdine biosynthesis protein PVCA; isonitrIle, paerucumarin, 2-isocyano-6,7-dihydroxycoum transferase; HET: PGE; 2.10A {Pseudomonas aeruginosa}
Probab=46.55 E-value=11 Score=31.54 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=29.9
Q ss_pred CCcHHHHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 47 GLALGRLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 47 ~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
.+.+.+|..+|+.|.+...-|-+|.|||=|-|
T Consensus 87 elAL~~Ln~lc~~I~~vY~PGa~v~IiSDG~V 118 (330)
T 3e59_A 87 RLSLSFLNHLCQRIQLFYAPGAKITVCSDGRV 118 (330)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEECCCHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEecCCce
Confidence 47888999999999999999999999999977
No 78
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=45.87 E-value=20 Score=24.50 Aligned_cols=24 Identities=4% Similarity=0.278 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhCCCeEEEEccch
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
....+.+..|+++|+.+.+||++.
T Consensus 94 ~~~~~~l~~l~~~g~~~~i~t~~~ 117 (206)
T 2b0c_A 94 PEVIAIMHKLREQGHRVVVLSNTN 117 (206)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCC
T ss_pred ccHHHHHHHHHHCCCeEEEEECCC
Confidence 456677888899999999999874
No 79
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=45.66 E-value=16 Score=27.76 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=29.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
|-|+...++|...-..+.+.|.++.++|.-||+||-
T Consensus 166 lLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtH 201 (250)
T 2d2e_A 166 VLDETDSGLDIDALKVVARGVNAMRGPNFGALVITH 201 (250)
T ss_dssp EEECGGGTTCHHHHHHHHHHHHHHCSTTCEEEEECS
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 345555779999989999999999777888888875
No 80
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=45.32 E-value=13 Score=26.20 Aligned_cols=24 Identities=17% Similarity=0.322 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 53 LASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 53 l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
+....+.+..|+++|+.+.|||++
T Consensus 44 ~pg~~e~L~~L~~~G~~l~i~Tn~ 67 (176)
T 2fpr_A 44 EPGVIPQLLKLQKAGYKLVMITNQ 67 (176)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred CccHHHHHHHHHHCCCEEEEEECC
Confidence 356777888999999999999998
No 81
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=45.28 E-value=15 Score=26.45 Aligned_cols=49 Identities=10% Similarity=0.167 Sum_probs=31.1
Q ss_pred cCCeEEEEeCccccccCCCCCCc----HHHHHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 27 YARRLVVKLGSAVITREDEHGLA----LGRLASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~----~~~l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
..|.+++=+- .+|.... .... ...+....+.+..|+++|+.+.+||++.
T Consensus 24 ~~k~v~~D~D-GTL~~~~-~~~~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~ 76 (211)
T 2gmw_A 24 SVPAIFLDRD-GTINVDH-GYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQS 76 (211)
T ss_dssp CBCEEEECSB-TTTBCCC-SSCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred cCCEEEEcCC-CCeECCC-CcccCcccCcCCcCHHHHHHHHHHCCCeEEEEECcC
Confidence 4566777773 2344332 0000 1123567778899999999999999987
No 82
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=44.90 E-value=29 Score=30.11 Aligned_cols=37 Identities=16% Similarity=0.323 Sum_probs=31.8
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|.|+...++|......+.+.|.+|+++|.-||+||-=
T Consensus 569 llDEPt~~LD~~~~~~i~~~l~~l~~~g~tvi~vtHd 605 (670)
T 3ux8_A 569 ILDEPTTGLHVDDIARLLDVLHRLVDNGDTVLVIEHN 605 (670)
T ss_dssp EEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4566667899999999999999999999999999864
No 83
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=44.48 E-value=11 Score=27.25 Aligned_cols=24 Identities=17% Similarity=0.063 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhCCCeEEEEccchH
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
.+.+.+..|+++|+.+.+||++.-
T Consensus 81 g~~~~l~~L~~~g~~~~ivS~~~~ 104 (236)
T 2fea_A 81 GFREFVAFINEHEIPFYVISGGMD 104 (236)
T ss_dssp THHHHHHHHHHHTCCEEEEEEEEH
T ss_pred cHHHHHHHHHhCCCeEEEEeCCcH
Confidence 456678888899999999999864
No 84
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=43.79 E-value=34 Score=29.33 Aligned_cols=48 Identities=10% Similarity=0.210 Sum_probs=40.9
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
+.||+.|.+=-|+=.++ +.-.|..+|.+-.-.|..|.++|-+|||.|-
T Consensus 11 ~gKrVlvRvD~NVPl~~-g~Itdd~RI~a~lpTI~~ll~~gakvil~SH 58 (398)
T 1vpe_A 11 KGKRVIMRVDFNVPVKD-GVVQDDTRIRAALPTIKYALEQGAKVILLSH 58 (398)
T ss_dssp TTCEEEEECCCCCCEET-TEESCCHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEecCCCcccC-CccCChHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 56999999999997654 2236888999999999999999999999984
No 85
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=43.66 E-value=13 Score=26.10 Aligned_cols=24 Identities=8% Similarity=0.037 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhCCCeEEEEccch
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
....+.+..|+++|+.+++||++.
T Consensus 71 ~g~~e~L~~L~~~G~~v~ivT~~~ 94 (187)
T 2wm8_A 71 PEVPEVLKRLQSLGVPGAAASRTS 94 (187)
T ss_dssp TTHHHHHHHHHHHTCCEEEEECCS
T ss_pred hhHHHHHHHHHHCCceEEEEeCCC
Confidence 456677888889999999999886
No 86
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=43.48 E-value=26 Score=27.47 Aligned_cols=37 Identities=24% Similarity=0.258 Sum_probs=29.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHH-hCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECH-LEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~-~~G~eVILVSSG 76 (131)
|.|+...++|...-..+.+.+.++. ++|.-||+||-=
T Consensus 166 lLDEPts~LD~~~~~~i~~~l~~l~~~~g~tvi~vtHd 203 (275)
T 3gfo_A 166 ILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHD 203 (275)
T ss_dssp EEECTTTTCCHHHHHHHHHHHHHHHHHHCCEEEEEESC
T ss_pred EEECccccCCHHHHHHHHHHHHHHHhhCCCEEEEEecC
Confidence 4566667899999899999999997 669888888753
No 87
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=43.40 E-value=17 Score=28.03 Aligned_cols=36 Identities=28% Similarity=0.389 Sum_probs=29.4
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
|-|+...++|......+.+.+.++.++|.-||+||-
T Consensus 187 lLDEPts~LD~~~~~~l~~~l~~l~~~g~tviivtH 222 (267)
T 2zu0_C 187 ILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTH 222 (267)
T ss_dssp EEESTTTTCCHHHHHHHHHHHHTTCCSSCEEEEECS
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEee
Confidence 446666789999989999999998777888888876
No 88
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=42.90 E-value=25 Score=29.34 Aligned_cols=37 Identities=14% Similarity=-0.027 Sum_probs=30.2
Q ss_pred EEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEE
Q psy11676 31 LVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIM 72 (131)
Q Consensus 31 IVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVIL 72 (131)
.+||+|+..+... | ...+..|-+.|..+++.|+.|++
T Consensus 130 ~~vKvg~~lfea~--G---~~gi~~L~~~v~~lr~~g~~Vfl 166 (353)
T 2ffc_A 130 LAYKMNFAFYLPY--G---SLGVDVLKNVFDYLHHLNVPTIL 166 (353)
T ss_dssp SEEEEEGGGGSTT--T---HHHHHHHHHHHHHHHHHTCCEEE
T ss_pred ceeeccHHHHHhc--C---HHHHHHHHHHHHHHHHcCCcEEE
Confidence 5699999999865 2 66777888888888888998886
No 89
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=41.90 E-value=10 Score=27.32 Aligned_cols=25 Identities=16% Similarity=0.282 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
....+.+..|+++|+.+++||++.-
T Consensus 59 ~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 59 PQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp GGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred cCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 4567788899999999999999874
No 90
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=41.17 E-value=16 Score=25.87 Aligned_cols=23 Identities=13% Similarity=0.226 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhCCCeEEEEccch
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGA 77 (131)
...+.+..|+++|+.+.+||++.
T Consensus 99 ~~~~~l~~l~~~g~~~~i~Tn~~ 121 (220)
T 2zg6_A 99 DTLEFLEGLKSNGYKLALVSNAS 121 (220)
T ss_dssp THHHHHHHHHTTTCEEEECCSCH
T ss_pred CHHHHHHHHHHCCCEEEEEeCCc
Confidence 34566888899999999999985
No 91
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=41.02 E-value=39 Score=28.82 Aligned_cols=48 Identities=10% Similarity=0.188 Sum_probs=40.8
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
+.||+.|.+=-|+-.++ +.=.|..+|.+-.-.|..|.++|-+|||.|-
T Consensus 10 ~gKrVlvRvD~NVPl~~-g~Itdd~RI~aalpTI~~ll~~gakvil~SH 57 (390)
T 1v6s_A 10 KGKRVLVRVDYNVPVQD-GKVQDETRILESLPTLRHLLAGGASLVLLSH 57 (390)
T ss_dssp TTCEEEEECCCCCCEET-TEESCCHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEecCCCcccC-CccCChHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 56999999999987764 2236888999999999999999999999875
No 92
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=40.75 E-value=40 Score=28.82 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=41.0
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
+.||+.|.+=-|+=.++ +.=.|..+|.+-.-.|..|.++|-+|||.|-
T Consensus 12 ~gKrVlvRvD~NVPl~~-g~Itdd~RI~aalpTI~~ll~~gakvil~SH 59 (394)
T 1php_A 12 RGKRVFCRVDFNVPMEQ-GAITDDTRIRAALPTIRYLIEHGAKVILASH 59 (394)
T ss_dssp TTCEEEEECCCCCCEET-TEESCCHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEecCCCcccC-CccCChHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 56999999999996654 2236888999999999999999999999886
No 93
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=40.61 E-value=13 Score=30.35 Aligned_cols=14 Identities=43% Similarity=0.793 Sum_probs=12.2
Q ss_pred hCCCeEEEEccchH
Q psy11676 65 LEGRECIMVTSGAV 78 (131)
Q Consensus 65 ~~G~eVILVSSGAV 78 (131)
-.|+++||||||.-
T Consensus 34 l~gk~~VLITaGgT 47 (313)
T 1p9o_A 34 AQGRRVVLVTSGGT 47 (313)
T ss_dssp HTTCCEEEEEESBC
T ss_pred hcCCeEEEEeCCCc
Confidence 47999999999975
No 94
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=40.35 E-value=41 Score=28.70 Aligned_cols=48 Identities=8% Similarity=0.193 Sum_probs=41.0
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
+.||+.|.+=-|+=.++ +.=.|..+|.+-.-.|..|.++|-+|||.|-
T Consensus 12 ~gKrVlvRvD~NVP~~~-g~Itdd~RI~aalpTI~~ll~~gakvil~SH 59 (387)
T 1zmr_A 12 AGKRVFIRADLNVPVKD-GKVTSDARIRASLPTIELALKQGAKVMVTSH 59 (387)
T ss_dssp TTCEEEEECCCCCCEET-TEESCCHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEecCCCcccC-CccCChHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 56999999999986654 2236888999999999999999999999885
No 95
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=40.30 E-value=17 Score=25.09 Aligned_cols=24 Identities=13% Similarity=0.130 Sum_probs=19.7
Q ss_pred HHHHHHHHHhCCCeEEEEccchHH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
..+.+..|+++|+.+.+||++.-.
T Consensus 80 ~~~~l~~l~~~g~~~~i~S~~~~~ 103 (217)
T 3m1y_A 80 ALELVSALKEKNYKVVCFSGGFDL 103 (217)
T ss_dssp HHHHHHHHHTTTEEEEEEEEEEHH
T ss_pred HHHHHHHHHHCCCEEEEEcCCchh
Confidence 456778889999999999998543
No 96
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=40.27 E-value=24 Score=26.46 Aligned_cols=30 Identities=27% Similarity=0.328 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhCCCeEEEEccchHHHhhh
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGAVAFGKQ 83 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGAVaaG~~ 83 (131)
..+.+.+..|+++|+.+.|+|++....-..
T Consensus 133 ~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~ 162 (261)
T 1yns_A 133 ADVVPAVRKWREAGMKVYIYSSGSVEAQKL 162 (261)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred cCHHHHHHHHHhCCCeEEEEeCCCHHHHHH
Confidence 345667888889999999999997654443
No 97
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=40.23 E-value=25 Score=23.57 Aligned_cols=23 Identities=13% Similarity=0.202 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhCCCeEEEEccch
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGA 77 (131)
...+.+..|++.|+.+.++|++.
T Consensus 83 ~~~~~l~~l~~~g~~~~i~t~~~ 105 (201)
T 4ap9_A 83 EARELVETLREKGFKVVLISGSF 105 (201)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEE
T ss_pred hHHHHHHHHHHCCCeEEEEeCCc
Confidence 45567888899999999999874
No 98
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=40.13 E-value=20 Score=25.86 Aligned_cols=21 Identities=19% Similarity=0.110 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhCCCeEEEEcc
Q psy11676 55 SIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSS 75 (131)
...+.|.+|+++|+.|+|+|.
T Consensus 28 ~~~~al~~l~~~G~~iii~Tg 48 (142)
T 2obb_A 28 FAVETLKLLQQEKHRLILWSV 48 (142)
T ss_dssp THHHHHHHHHHTTCEEEECCS
T ss_pred HHHHHHHHHHHCCCEEEEEeC
Confidence 567889999999999999995
No 99
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=40.10 E-value=70 Score=22.95 Aligned_cols=49 Identities=10% Similarity=0.089 Sum_probs=34.6
Q ss_pred CCeEEEEeCccccccCCCCCCcH-HHHHHHHHHHHHHHhC-------CCeEEEEccchH
Q psy11676 28 ARRLVVKLGSAVITREDEHGLAL-GRLASIVEQVAECHLE-------GRECIMVTSGAV 78 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~-~~l~~l~~qIa~L~~~-------G~eVILVSSGAV 78 (131)
++.|||=+|+|=+.... +.+. .+...+.+-|..+++. +.+|+||+...+
T Consensus 102 ~d~VvI~~GtND~~~~~--~~~~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~ 158 (232)
T 3dci_A 102 LDLVIIMLGTNDIKPVH--GGRAEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPC 158 (232)
T ss_dssp CSEEEEECCTTTTSGGG--TSSHHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCC
T ss_pred CCEEEEEeccCCCcccc--CCCHHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCc
Confidence 48899999999877542 1233 3446677777777774 689999986543
No 100
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=39.78 E-value=20 Score=28.95 Aligned_cols=25 Identities=12% Similarity=0.080 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhCCCeEEEEccchHH
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
...+-+..|++.|++|.|||.+-.-
T Consensus 147 ~~~~l~~~l~~~G~~v~ivSas~~~ 171 (327)
T 4as2_A 147 GQRELYNKLMENGIEVYVISAAHEE 171 (327)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCcHH
Confidence 3456677888999999999998543
No 101
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=38.88 E-value=25 Score=26.87 Aligned_cols=23 Identities=13% Similarity=0.312 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhCCCeEEEEccc
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSG 76 (131)
.++++.|.+..++|..|++++||
T Consensus 64 ~~~~~~i~~~~~~g~~V~~l~~G 86 (253)
T 4e16_A 64 QEIIDVMREGIENNKSVVRLQTG 86 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESB
T ss_pred HHHHHHHHHHHHCCCcEEEEeCC
Confidence 56777888777889999999998
No 102
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=38.66 E-value=20 Score=27.76 Aligned_cols=23 Identities=30% Similarity=0.632 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEccc
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSG 76 (131)
.++++.+.++.++|+.|++++||
T Consensus 63 ~~~~~~i~~~~~~G~~Va~L~~G 85 (264)
T 3ndc_A 63 DAIIDTIAEAHAAGQDVARLHSG 85 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESB
T ss_pred HHHHHHHHHHHHCCCeEEEEeCC
Confidence 46777787777789999999998
No 103
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=38.39 E-value=19 Score=25.41 Aligned_cols=21 Identities=10% Similarity=0.197 Sum_probs=17.9
Q ss_pred HHHHHHhCCCeEEEEccchHH
Q psy11676 59 QVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 59 qIa~L~~~G~eVILVSSGAVa 79 (131)
.+..|+++|+++.+||+..-.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~ 67 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNP 67 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCH
T ss_pred HHHHHHHCCCeEEEEECcChH
Confidence 688999999999999987543
No 104
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=38.00 E-value=50 Score=28.45 Aligned_cols=48 Identities=13% Similarity=0.285 Sum_probs=40.8
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
+.||+.|.+=-|+=.++ +.=.|..+|.+-.-.|..|.++|-+|||.|-
T Consensus 11 ~gKrVlvRvD~NVPl~~-g~Itdd~RI~aalpTI~~ll~~Gakvil~SH 58 (415)
T 16pk_A 11 KGKKVLIRVDFNVPVKN-GKITNDYRIRSALPTLKKVLTEGGSCVLMSH 58 (415)
T ss_dssp TTCEEEEEECCCCCEET-TEESCCHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEeccCCcccC-CccCchHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 56999999999996653 2236888999999999999999999999885
No 105
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=37.79 E-value=24 Score=24.28 Aligned_cols=49 Identities=12% Similarity=0.091 Sum_probs=34.9
Q ss_pred cCCeEEEEeCccccccCCC-C-----CC-cHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDE-H-----GL-ALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~-~-----~l-~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
+.+.|||=+|++=+..... + .. -..+...+.+-|..+++.|.+||++|.
T Consensus 83 ~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~p 138 (216)
T 3rjt_A 83 QPDYVSLMIGVNDVWRQFDMPLVVERHVGIDEYRDTLRHLVATTKPRVREMFLLSP 138 (216)
T ss_dssp CCSEEEEECCHHHHHHHHHSTTCGGGCCCHHHHHHHHHHHHHHHGGGSSEEEEECC
T ss_pred CCCEEEEEeeccccchhhccccccccCCCHHHHHHHHHHHHHHHHhcCCeEEEECC
Confidence 4688999999987763210 0 11 234557788888888888999999984
No 106
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=37.35 E-value=43 Score=27.87 Aligned_cols=37 Identities=8% Similarity=-0.011 Sum_probs=30.5
Q ss_pred EEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEE
Q psy11676 31 LVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIM 72 (131)
Q Consensus 31 IVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVIL 72 (131)
.++|+|...+... | ...+..|-+.|..+++.|+.|++
T Consensus 120 ~~vKvg~~lf~~~--G---~~gv~~L~~~i~~lk~~g~~Vfl 156 (352)
T 2fds_A 120 LIYKMNFAFYIPY--G---SVGINALKNVFDYLNSMNIPTML 156 (352)
T ss_dssp SEEEEEGGGTGGG--T---HHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEecHHHHHhC--C---HHHHHHHHHHHHHHHHCCCeEEE
Confidence 4699999999875 2 56777888888899999999887
No 107
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=37.08 E-value=37 Score=25.79 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=29.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhC-CCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLE-GRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~-G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.+.++.++ |.-||+||-=
T Consensus 149 lLDEPts~LD~~~~~~~~~~l~~l~~~~g~tvi~vtHd 186 (240)
T 2onk_A 149 LLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHD 186 (240)
T ss_dssp EEESTTSSCCHHHHHHHHHHHHHHHHHHTCCEEEEESC
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 446666789999989999999999654 8889988874
No 108
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=37.05 E-value=61 Score=27.87 Aligned_cols=48 Identities=6% Similarity=0.095 Sum_probs=41.6
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCe-EEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRE-CIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~e-VILVSS 75 (131)
+.||+.|.+=-|+-.++ +.=.|..+|.+-.-.|..|.++|-+ |||.|-
T Consensus 14 ~gKrVlvRvD~NVPl~~-g~Itdd~RI~aalpTIk~ll~~gak~Vil~SH 62 (415)
T 1qpg_A 14 KDKRVFIRVDFNVPLDG-KKITSNQRIVAALPTIKYVLEHHPRYVVLASH 62 (415)
T ss_dssp TTCEEEEECCCCCCBSS-SSBSCCHHHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred CCCEEEEEecCCCcccC-CccCChHHHHHHHHHHHHHHHCCCCEEEEEec
Confidence 56999999999998864 2336889999999999999999999 999885
No 109
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=37.01 E-value=26 Score=23.70 Aligned_cols=23 Identities=26% Similarity=0.299 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.+..|+++|+.+.+||++.-
T Consensus 87 ~~~~l~~l~~~g~~~~i~s~~~~ 109 (219)
T 3kd3_A 87 IKELVQDLKNKGFEIWIFSGGLS 109 (219)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEH
T ss_pred HHHHHHHHHHCCCeEEEEcCCcH
Confidence 44567788999999999999753
No 110
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=36.76 E-value=22 Score=25.29 Aligned_cols=22 Identities=9% Similarity=0.119 Sum_probs=18.8
Q ss_pred HHHHHHhCCCeEEEEccchHHH
Q psy11676 59 QVAECHLEGRECIMVTSGAVAF 80 (131)
Q Consensus 59 qIa~L~~~G~eVILVSSGAVaa 80 (131)
.|..|+++|+++.+||+..-..
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~ 75 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAI 75 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHH
T ss_pred HHHHHHHCCCEEEEEECcChHH
Confidence 7889999999999999986443
No 111
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=36.76 E-value=22 Score=24.94 Aligned_cols=24 Identities=17% Similarity=0.156 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhC-CCeEEEEccch
Q psy11676 54 ASIVEQVAECHLE-GRECIMVTSGA 77 (131)
Q Consensus 54 ~~l~~qIa~L~~~-G~eVILVSSGA 77 (131)
....+.+..|+++ |+.+.+||++.
T Consensus 76 ~g~~e~L~~L~~~~g~~~~ivT~~~ 100 (193)
T 2i7d_A 76 PGALDAVREMNDLPDTQVFICTSPL 100 (193)
T ss_dssp TTHHHHHHHHHTSTTEEEEEEECCC
T ss_pred cCHHHHHHHHHhCCCCeEEEEeCCC
Confidence 4566778888899 99999999984
No 112
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=36.46 E-value=30 Score=30.05 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=30.2
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
|-|+...++|......+.+.|.+|+++|.-||+||=
T Consensus 227 lLDEPtsgLD~~~~~~l~~~l~~l~~~g~tvi~vtH 262 (670)
T 3ux8_A 227 VLDEPSIGLHQRDNDRLIATLKSMRDLGNTLIVVEH 262 (670)
T ss_dssp EEECTTTTCCGGGHHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEECCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 456666789998888999999999989999999874
No 113
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii}
Probab=36.18 E-value=42 Score=28.81 Aligned_cols=49 Identities=6% Similarity=0.131 Sum_probs=41.2
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
+.||+.|.+=-|+-.++ +.=.|..+|.+-.-.|..|.++|-+|||.|-=
T Consensus 10 ~gKrVlvRvD~NVPl~~-g~Itdd~RI~a~lpTI~~ll~~gakVvl~SHl 58 (410)
T 2cun_A 10 HNKTVFLRVDLNSPMKD-GKIISDARFKAVLPTIRYLIESGAKVVIGTHQ 58 (410)
T ss_dssp TTCEEEEECCCCCCEET-TEECCCHHHHHTHHHHHHHHHTTCEEEEECCC
T ss_pred CCCEEEEEecCCCcccC-CcCCCHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 56999999999986653 22368889999999999999999999999864
No 114
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=35.68 E-value=25 Score=24.80 Aligned_cols=24 Identities=25% Similarity=0.216 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhC-CCeEEEEccch
Q psy11676 54 ASIVEQVAECHLE-GRECIMVTSGA 77 (131)
Q Consensus 54 ~~l~~qIa~L~~~-G~eVILVSSGA 77 (131)
....+.+..|+++ |+.+.+|||+.
T Consensus 78 ~g~~e~L~~L~~~~g~~~~ivT~~~ 102 (197)
T 1q92_A 78 PGAVEAVKEMASLQNTDVFICTSPI 102 (197)
T ss_dssp TTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred cCHHHHHHHHHhcCCCeEEEEeCCc
Confidence 4566778888899 99999999985
No 115
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=35.68 E-value=32 Score=24.31 Aligned_cols=24 Identities=13% Similarity=0.075 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCCeEEEEccchH
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
.+.+.+..|+++|+.+.+||++.-
T Consensus 87 ~~~~~l~~l~~~g~~~~i~s~~~~ 110 (222)
T 2nyv_A 87 EIPYTLEALKSKGFKLAVVSNKLE 110 (222)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCH
T ss_pred CHHHHHHHHHHCCCeEEEEcCCCH
Confidence 345667888899999999999753
No 116
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=35.64 E-value=52 Score=24.61 Aligned_cols=35 Identities=11% Similarity=-0.052 Sum_probs=24.8
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHH
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
|.+.+ +.++. ...+.|.+|+++|+.|+++|.-...
T Consensus 15 Ll~~~-~~i~~----~~~~~l~~l~~~g~~~~iaTGR~~~ 49 (246)
T 3f9r_A 15 LTPPR-LCQTD----EMRALIKRARGAGFCVGTVGGSDFA 49 (246)
T ss_dssp TBSTT-SCCCH----HHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred cCCCC-CccCH----HHHHHHHHHHHCCCEEEEECCCCHH
Confidence 44443 45665 3456688899999999999987654
No 117
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=35.24 E-value=52 Score=28.13 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=30.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
|-|+...++|......+.+.|.++.+.|.-||+||-
T Consensus 181 lLDEPTs~LD~~~~~~l~~~L~~l~~~g~tvi~vsH 216 (538)
T 1yqt_A 181 FFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEH 216 (538)
T ss_dssp EEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 346556789999888999999999888999999985
No 118
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=35.17 E-value=30 Score=26.98 Aligned_cols=22 Identities=9% Similarity=0.152 Sum_probs=18.9
Q ss_pred HHHHHHHHHHhCCCeEEEEccc
Q psy11676 55 SIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSG 76 (131)
...+.+..|+++|+++.+||++
T Consensus 104 ~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 104 PMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp HHHHHHHHHHHTTCEEEEEECC
T ss_pred hHHHHHHHHHHCCCEEEEEeCC
Confidence 3456688899999999999998
No 119
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=35.01 E-value=35 Score=23.52 Aligned_cols=24 Identities=29% Similarity=0.159 Sum_probs=19.2
Q ss_pred HHHHHHHHHhCCCeEEEEccchHH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
+.+.+..|+++|+.+.++|++.-.
T Consensus 75 ~~~~l~~l~~~g~~~~i~s~~~~~ 98 (205)
T 3m9l_A 75 AVELVRELAGRGYRLGILTRNARE 98 (205)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHH
T ss_pred HHHHHHHHHhcCCeEEEEeCCchH
Confidence 455677888999999999998543
No 120
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=35.00 E-value=32 Score=23.04 Aligned_cols=26 Identities=19% Similarity=0.208 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhCCCeEEEEccchHHH
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGAVAF 80 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGAVaa 80 (131)
.+.+.+..|+++|+.+.++|++.-..
T Consensus 93 ~~~~~l~~l~~~g~~~~i~s~~~~~~ 118 (214)
T 3e58_A 93 DVLKVLNEVKSQGLEIGLASSSVKAD 118 (214)
T ss_dssp THHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred hHHHHHHHHHHCCCCEEEEeCCcHHH
Confidence 35567788999999999999986433
No 121
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans}
Probab=34.98 E-value=34 Score=28.66 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=29.3
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 41 TREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 41 t~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
.++...++|......+.+.|.++.+ |..||+||.=
T Consensus 423 lDEp~~gld~~~~~~i~~~l~~~~~-~~~vi~itH~ 457 (517)
T 4ad8_A 423 FDEVDAGIGGAAAIAVAEQLSRLAD-TRQVLVVTHL 457 (517)
T ss_dssp ECSCSSSCCTHHHHHHHHHHHHHHH-HSEEEEECCC
T ss_pred EeCCcCCCCHHHHHHHHHHHHHHhC-CCEEEEEecC
Confidence 3555578999888999999999987 9999999975
No 122
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=34.84 E-value=27 Score=24.44 Aligned_cols=22 Identities=0% Similarity=-0.173 Sum_probs=18.7
Q ss_pred HHHHHHHHhCCCeEEEEccchH
Q psy11676 57 VEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 57 ~~qIa~L~~~G~eVILVSSGAV 78 (131)
.+.|..|+++|+.++++|...-
T Consensus 41 ~~~l~~L~~~G~~~~i~Tg~~~ 62 (180)
T 1k1e_A 41 GLGIKMLMDADIQVAVLSGRDS 62 (180)
T ss_dssp HHHHHHHHHTTCEEEEEESCCC
T ss_pred HHHHHHHHHCCCeEEEEeCCCc
Confidence 3678889999999999998753
No 123
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=34.54 E-value=84 Score=22.44 Aligned_cols=46 Identities=15% Similarity=0.032 Sum_probs=31.3
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhC--CCeEEEEccch
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLE--GRECIMVTSGA 77 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~--G~eVILVSSGA 77 (131)
+.+.|||=+|++=+- .....+...+.+.|..+++. +.+|++++..-
T Consensus 94 ~pd~vvi~~G~ND~~-----~~~~~~~~~l~~~i~~l~~~~p~~~iil~~~~p 141 (229)
T 1fxw_F 94 KPKVIVVWVGTNNHE-----NTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLP 141 (229)
T ss_dssp CCSEEEEECCTTCTT-----SCHHHHHHHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred CCCEEEEEEecCCCC-----CCHHHHHHHHHHHHHHHHHHCCCCeEEEEeCCC
Confidence 457899999998651 11233456677777777776 78999987543
No 124
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=34.44 E-value=37 Score=22.78 Aligned_cols=24 Identities=13% Similarity=0.034 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCeEEEEccchHH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
+.+.+..|++.|+.+.++|.+.-.
T Consensus 89 ~~~~l~~l~~~g~~~~i~s~~~~~ 112 (216)
T 2pib_A 89 VREALEFVKSKRIKLALATSTPQR 112 (216)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHH
T ss_pred HHHHHHHHHHCCCCEEEEeCCcHH
Confidence 345677889999999999998643
No 125
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=34.01 E-value=19 Score=27.11 Aligned_cols=36 Identities=8% Similarity=0.087 Sum_probs=27.6
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
|-++...++|...-..+.+.+.++.++|.-||+||-
T Consensus 156 lLDEPts~LD~~~~~~l~~~l~~~~~~g~tiiivtH 191 (214)
T 1sgw_A 156 VLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSR 191 (214)
T ss_dssp EEESTTTTSCTTTHHHHHHHHHHHHHHHSEEEEEES
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 345556779988888888888888777888888774
No 126
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=33.78 E-value=66 Score=24.37 Aligned_cols=36 Identities=19% Similarity=0.287 Sum_probs=28.6
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-++...++|...-..+.+.+.++. +|.-||+||-=
T Consensus 168 lLDEPts~LD~~~~~~i~~~l~~~~-~g~tviivtH~ 203 (247)
T 2ff7_A 168 IFDEATSALDYESEHVIMRNMHKIC-KGRTVIIIAHR 203 (247)
T ss_dssp EECCCCSCCCHHHHHHHHHHHHHHH-TTSEEEEECSS
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 3466567899999899999999985 58888888864
No 127
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=33.45 E-value=34 Score=23.83 Aligned_cols=23 Identities=13% Similarity=0.323 Sum_probs=18.4
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.+..|+++|+.+.+||++.-
T Consensus 100 ~~~~l~~l~~~g~~~~i~t~~~~ 122 (232)
T 1zrn_A 100 VPDSLRELKRRGLKLAILSNGSP 122 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCH
T ss_pred HHHHHHHHHHCCCEEEEEeCCCH
Confidence 44557778899999999999853
No 128
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=33.20 E-value=27 Score=23.61 Aligned_cols=23 Identities=13% Similarity=0.047 Sum_probs=18.7
Q ss_pred HHHHHHhCCCeEEEEccchHHHh
Q psy11676 59 QVAECHLEGRECIMVTSGAVAFG 81 (131)
Q Consensus 59 qIa~L~~~G~eVILVSSGAVaaG 81 (131)
.+..|+++|+.+.++|++.-..-
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~ 61 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIV 61 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHH
Confidence 57889999999999998864433
No 129
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=32.99 E-value=84 Score=20.99 Aligned_cols=49 Identities=10% Similarity=0.197 Sum_probs=33.2
Q ss_pred ccCCeEEEEeCccccccCCCCCCcHH-HHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 26 KYARRLVVKLGSAVITREDEHGLALG-RLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 26 ~~~krIVIKiGSs~Lt~~~~~~l~~~-~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
.+.+.|||=+|++=+... ...+.+ +...+.+.|..++ +.+|++++..-+
T Consensus 66 ~~pd~vvi~~G~ND~~~~--~~~~~~~~~~~l~~~i~~~~--~~~vi~~~~~p~ 115 (195)
T 1yzf_A 66 EKPDEVVIFFGANDASLD--RNITVATFRENLETMIHEIG--SEKVILITPPYA 115 (195)
T ss_dssp GCCSEEEEECCTTTTCTT--SCCCHHHHHHHHHHHHHHHC--GGGEEEECCCCC
T ss_pred cCCCEEEEEeeccccCcc--CCCCHHHHHHHHHHHHHHhc--CCEEEEEcCCCC
Confidence 356889999999877632 233443 3455666666665 899999997654
No 130
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=32.81 E-value=47 Score=25.24 Aligned_cols=28 Identities=21% Similarity=0.230 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 51 GRLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 51 ~~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+..+..-..+|.++|++|.+++++..
T Consensus 16 Ghv~~~~~La~~L~~~GheV~v~~~~~~ 43 (402)
T 3ia7_A 16 GHVYPSLGLVSELARRGHRITYVTTPLF 43 (402)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred cccccHHHHHHHHHhCCCEEEEEcCHHH
Confidence 3444555555667789999999998754
No 131
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=32.76 E-value=27 Score=24.71 Aligned_cols=20 Identities=10% Similarity=0.064 Sum_probs=17.3
Q ss_pred HHHHHHhCCCeEEEEccchH
Q psy11676 59 QVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 59 qIa~L~~~G~eVILVSSGAV 78 (131)
.+..|+++|+++++||+..-
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~ 80 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKA 80 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCC
T ss_pred HHHHHHHCCCeEEEEeCCCh
Confidence 68888999999999998753
No 132
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=32.29 E-value=1e+02 Score=22.76 Aligned_cols=46 Identities=17% Similarity=0.146 Sum_probs=29.9
Q ss_pred hccCCeEEEEe-CccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 25 LKYARRLVVKL-GSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 25 l~~~krIVIKi-GSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
....|-|+.=+ || |.+.+ ..+... ..+.|.+|+++|+.|+++|-=.
T Consensus 18 ~~~~kli~~DlDGT--Ll~~~-~~i~~~----~~~al~~l~~~G~~v~iaTGR~ 64 (285)
T 3pgv_A 18 QGMYQVVASDLDGT--LLSPD-HFLTPY----AKETLKLLTARGINFVFATGRH 64 (285)
T ss_dssp ---CCEEEEECCCC--CSCTT-SCCCHH----HHHHHHHHHTTTCEEEEECSSC
T ss_pred cCcceEEEEeCcCC--CCCCC-CcCCHH----HHHHHHHHHHCCCEEEEEcCCC
Confidence 35567788888 64 44443 456664 4556778889999999987543
No 133
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=32.13 E-value=58 Score=29.97 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=32.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-++...++|......|.+.+.+|.+.|.-||+||.=
T Consensus 756 ILDEPTsGLD~~~~~~l~~lL~~L~~~G~tVIvisHd 792 (842)
T 2vf7_A 756 VLDEPTTGLHPADVERLQRQLVKLVDAGNTVIAVEHK 792 (842)
T ss_dssp EEECTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3455567899999999999999999999999999986
No 134
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=32.13 E-value=57 Score=22.50 Aligned_cols=28 Identities=11% Similarity=-0.015 Sum_probs=21.2
Q ss_pred HHHHHHHHHhCCCeEEEEccchHHHhhh
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVAFGKQ 83 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVaaG~~ 83 (131)
+.+.+..|++.|+.+.+||++.-..-..
T Consensus 89 ~~~~l~~L~~~g~~~~i~tn~~~~~~~~ 116 (216)
T 3kbb_A 89 VREALEFVKSKRIKLALATSTPQREALE 116 (216)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred HHHHHHHHHHcCCCcccccCCcHHHHHH
Confidence 3456778899999999999987544433
No 135
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=31.94 E-value=35 Score=26.59 Aligned_cols=37 Identities=22% Similarity=0.080 Sum_probs=29.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeE--EEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGREC--IMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eV--ILVSSG 76 (131)
|-|+...++|...-..+.+.|.++.++|.-| |+||-=
T Consensus 184 lLDEPts~LD~~~~~~l~~~l~~l~~~g~tv~~iivtHd 222 (279)
T 2ihy_A 184 ILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHF 222 (279)
T ss_dssp EEESTTTTCCHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEeCCccccCHHHHHHHHHHHHHHHHCCCEEEEEEEecC
Confidence 4466667899999899999999998778888 888753
No 136
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=31.94 E-value=30 Score=25.28 Aligned_cols=23 Identities=13% Similarity=0.092 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhCCCeEEEEccch
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGA 77 (131)
...+.+..|+++|+.+.+||++.
T Consensus 92 ~~~e~l~~L~~~G~~l~ivTn~~ 114 (211)
T 2b82_A 92 VARQLIDMHVRRGDAIFFVTGRS 114 (211)
T ss_dssp HHHHHHHHHHHHTCEEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCc
Confidence 45567888999999999999985
No 137
>1j3a_A 50S ribosomal protein L13P; rRNA binding, ribosomal assembly, ribosome; 1.60A {Pyrococcus horikoshii} SCOP: c.21.1.1
Probab=31.81 E-value=43 Score=24.55 Aligned_cols=25 Identities=32% Similarity=0.517 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 52 RLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
.+..||.+||.+-..|..||+|-.-
T Consensus 10 ~LGRLAs~vAk~L~~Gd~VVViNae 34 (142)
T 1j3a_A 10 ILGRLASRVAKMLLEGEEVVIVNAE 34 (142)
T ss_dssp BHHHHHHHHHHHHHTTCCEEEECGG
T ss_pred chHHHHHHHHHHHhcCCEEEEEeCe
Confidence 4577888888888899999999644
No 138
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=31.80 E-value=35 Score=26.44 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEccch
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
+++++.|.+..++|..|++++||=
T Consensus 80 ~~~~~~i~~~~~~g~~Vv~L~~GD 103 (285)
T 1cbf_A 80 EEMVGTMLDRMREGKMVVRVHTGD 103 (285)
T ss_dssp HHHHHHHHHHHTTTCCEEEEESBC
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCC
Confidence 566777777778899999999984
No 139
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=31.65 E-value=67 Score=24.95 Aligned_cols=36 Identities=14% Similarity=0.101 Sum_probs=27.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-++...++|......+.+.+.++. .|..||+||-=
T Consensus 246 llDEp~~~LD~~~~~~l~~~l~~~~-~~~~vi~~tH~ 281 (322)
T 1e69_A 246 VLDEVDSPLDDYNAERFKRLLKENS-KHTQFIVITHN 281 (322)
T ss_dssp EEESCCSSCCHHHHHHHHHHHHHHT-TTSEEEEECCC
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEECC
Confidence 4455567799988888888888884 58888888764
No 140
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A
Probab=31.63 E-value=38 Score=29.18 Aligned_cols=48 Identities=13% Similarity=0.225 Sum_probs=40.4
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCe-EEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRE-CIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~e-VILVSS 75 (131)
+.||+.|.+=-|+=.++ +.=.|..+|.+-.-.|..|.++|-+ |||.|-
T Consensus 17 ~gKrVlvRvD~NVP~~~-g~Itdd~RI~aalpTI~~ll~~gak~Vil~SH 65 (417)
T 3oz7_A 17 KNKKVLVRVDFNVPIEN-GIIKDTNRITATLPTINHLKKEGASKIILISH 65 (417)
T ss_dssp TTCEEEEECCCCCCEET-TEESCCHHHHTTHHHHHHHHHHTCSEEEEECC
T ss_pred CCCEEEEEeccCCCccC-CcCCChHHHHHHHHHHHHHHHCCCCEEEEEec
Confidence 57999999998987753 2236888999999999999999999 999885
No 141
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=31.57 E-value=47 Score=24.17 Aligned_cols=40 Identities=18% Similarity=0.284 Sum_probs=27.6
Q ss_pred CCeEEEEe-CccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 28 ARRLVVKL-GSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 28 ~krIVIKi-GSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
.|-|++=+ || |.+. ...+..-.+.|.+|+++|+.|+++|-
T Consensus 6 ~kli~~DlDGT--Ll~~------~~~~~~~~~ai~~l~~~Gi~v~laTg 46 (266)
T 3pdw_A 6 YKGYLIDLDGT--MYNG------TEKIEEACEFVRTLKDRGVPYLFVTN 46 (266)
T ss_dssp CSEEEEECSSS--TTCH------HHHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEeCcCc--eEeC------CEeCccHHHHHHHHHHCCCeEEEEeC
Confidence 45566666 44 3222 22345678999999999999999964
No 142
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=31.54 E-value=46 Score=22.41 Aligned_cols=23 Identities=30% Similarity=0.460 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhCCCeEEEEccch
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGA 77 (131)
...+.+.+|+++|+.++++|.-.
T Consensus 28 ~~~~~l~~l~~~Gi~~~iaTGR~ 50 (126)
T 1xpj_A 28 DVIEQLREYHQLGFEIVISTARN 50 (126)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHhCCCeEEEEeCCC
Confidence 45677888999999999999654
No 143
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=31.44 E-value=93 Score=23.96 Aligned_cols=22 Identities=18% Similarity=0.132 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 52 RLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
.+..|++. |.++|++|.+++..
T Consensus 47 ~~~~la~~---L~~~G~~V~v~~~~ 68 (438)
T 3c48_A 47 YILSTATE---LAKQGIEVDIYTRA 68 (438)
T ss_dssp HHHHHHHH---HHHTTCEEEEEEEC
T ss_pred HHHHHHHH---HHhcCCEEEEEecC
Confidence 34455554 45679999999865
No 144
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=31.36 E-value=36 Score=23.71 Aligned_cols=23 Identities=9% Similarity=0.042 Sum_probs=18.8
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
+.+.+..|+++|+.+.++|++..
T Consensus 108 ~~~~l~~l~~~g~~~~i~T~~~~ 130 (231)
T 3kzx_A 108 AIELLDTLKENNITMAIVSNKNG 130 (231)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEH
T ss_pred HHHHHHHHHHCCCeEEEEECCCH
Confidence 45667788899999999998854
No 145
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ...
Probab=31.31 E-value=64 Score=27.75 Aligned_cols=48 Identities=15% Similarity=0.291 Sum_probs=41.2
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCe-EEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRE-CIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~e-VILVSS 75 (131)
+.||+.|.+=-|+-.++ +.=.|..+|.+-.-.|..|.++|-+ |||.|-
T Consensus 14 ~gKrVlvRvD~NVPl~~-g~Itdd~RI~aalpTIk~ll~~gak~Vil~SH 62 (416)
T 2wzb_A 14 KGKRVVMRVDFNVPMKN-NQITNNQRIKAAVPSIKFCLDNGAKSVVLMSH 62 (416)
T ss_dssp TTCEEEEECCCCCCEET-TEESCCHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCEEEEEecCCCcccC-CccCChHHHHHHHHHHHHHHHCCCCEEEEEec
Confidence 56999999999988864 2236888999999999999999999 999886
No 146
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=31.18 E-value=39 Score=23.83 Aligned_cols=23 Identities=13% Similarity=0.209 Sum_probs=18.6
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.+..|+++|+.+.++|++.-
T Consensus 110 ~~~~l~~l~~~g~~~~i~s~~~~ 132 (240)
T 2no4_A 110 AAETLEKLKSAGYIVAILSNGND 132 (240)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCH
T ss_pred HHHHHHHHHHCCCEEEEEcCCCH
Confidence 45567788899999999998853
No 147
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=31.15 E-value=98 Score=24.88 Aligned_cols=47 Identities=11% Similarity=0.171 Sum_probs=34.0
Q ss_pred CeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 29 RRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 29 krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
+.|||=+|+|=+.... ......+...+-+-|..+++.|.+|||||.-
T Consensus 232 d~VvI~~G~ND~~~~~-~~~~~~~~~~l~~ii~~lr~~~a~vilvtP~ 278 (375)
T 2o14_A 232 DYFMLQLGINDTNPKH-KESEAEFKEVMRDMIRQVKAKGADVILSTPQ 278 (375)
T ss_dssp CEEEEECCTGGGCGGG-CCCHHHHHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred CEEEEEEEccCCCccC-CCCHHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 7899999999776431 1112345567777788888889999999854
No 148
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=31.14 E-value=39 Score=26.23 Aligned_cols=24 Identities=17% Similarity=0.274 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEccch
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
.++++.+.++.++|+.|+++++|=
T Consensus 79 ~~i~~~l~~~~~~G~~Vv~L~~GD 102 (280)
T 1s4d_A 79 RDISLRLVELARAGNRVLRLKGGD 102 (280)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESBC
T ss_pred HHHHHHHHHHHhCCCeEEEEcCCC
Confidence 566777777777899999999984
No 149
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=31.01 E-value=42 Score=24.13 Aligned_cols=23 Identities=17% Similarity=0.202 Sum_probs=18.8
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.+..|+++|+.+.+||++.-
T Consensus 119 ~~~~l~~l~~~g~~~~i~t~~~~ 141 (243)
T 2hsz_A 119 VKETLEALKAQGYILAVVTNKPT 141 (243)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCH
T ss_pred HHHHHHHHHHCCCEEEEEECCcH
Confidence 45667788899999999999854
No 150
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=30.95 E-value=42 Score=25.21 Aligned_cols=25 Identities=20% Similarity=0.217 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 53 LASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 53 l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
+..+.+.+..|+++|+.+.+|||-.
T Consensus 190 ~~g~~e~L~~L~~~g~~~~v~T~k~ 214 (301)
T 1ltq_A 190 NPMVVELSKMYALMGYQIVVVSGRE 214 (301)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred ChHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3567888889999999999999875
No 151
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=30.49 E-value=54 Score=24.22 Aligned_cols=45 Identities=13% Similarity=0.258 Sum_probs=27.3
Q ss_pred CeEEEEe-CccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHH
Q psy11676 29 RRLVVKL-GSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 29 krIVIKi-GSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
|-|+.=+ || |.+.+ +.++... +.+.|.+|+++|+.|+++|.=...
T Consensus 4 kli~~DlDGT--Ll~~~-~~i~~~~---~~~al~~l~~~G~~~~iaTGR~~~ 49 (271)
T 1rlm_A 4 KVIVTDMDGT--FLNDA-KTYNQPR---FMAQYQELKKRGIKFVVASGNQYY 49 (271)
T ss_dssp CEEEECCCCC--CSCTT-SCCCHHH---HHHHHHHHHHHTCEEEEECSSCHH
T ss_pred cEEEEeCCCC--CCCCC-CcCCHHH---HHHHHHHHHHCCCEEEEEeCCcHH
Confidence 3444444 43 44443 3466542 356677788899999998876543
No 152
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=30.40 E-value=29 Score=27.28 Aligned_cols=26 Identities=12% Similarity=0.267 Sum_probs=20.5
Q ss_pred HHHHHHHHHhCCCeEEEEccchHHHh
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVAFG 81 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVaaG 81 (131)
..+.+..|+++|+++.|||++.-..-
T Consensus 184 ~~e~L~~Lk~~G~~v~IvSn~~~~~~ 209 (317)
T 4eze_A 184 LLTILPVIKAKGFKTAIISGGLDIFT 209 (317)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeCccHHHH
Confidence 44568889999999999999865433
No 153
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=30.33 E-value=27 Score=26.53 Aligned_cols=24 Identities=29% Similarity=0.328 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhCCCeEEEEccch
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
+++++.|.+..++|..|++++||=
T Consensus 83 ~~~~~~i~~~~~~g~~Va~l~~GD 106 (259)
T 2e0n_A 83 AANYASMAEEVQAGRRVAVVSVGD 106 (259)
T ss_dssp GGGHHHHHHHHHTTCEEEEEESBC
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCC
Confidence 566777777778899999999984
No 154
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=30.32 E-value=67 Score=23.99 Aligned_cols=42 Identities=14% Similarity=0.397 Sum_probs=26.9
Q ss_pred CeEEEEe-CccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 29 RRLVVKL-GSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 29 krIVIKi-GSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
|-|+.=+ || |.+.+ +.++.. ..+.|.+|+++|+.|+++|.=.
T Consensus 6 kli~~DlDGT--Ll~~~-~~i~~~----~~~aL~~l~~~Gi~vviaTGR~ 48 (282)
T 1rkq_A 6 KLIAIDMDGT--LLLPD-HTISPA----VKNAIAAARARGVNVVLTTGRP 48 (282)
T ss_dssp CEEEECCCCC--CSCTT-SCCCHH----HHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEEeCCCC--CCCCC-CcCCHH----HHHHHHHHHHCCCEEEEEcCCC
Confidence 4455555 43 34343 356654 3466778889999999999543
No 155
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=30.19 E-value=46 Score=24.76 Aligned_cols=23 Identities=22% Similarity=0.328 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhCCCeEEEEccc
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSG 76 (131)
..+++.|.+..++|++|+++.||
T Consensus 65 ~~~~~~i~~~~~~g~~V~~l~~G 87 (235)
T 1ve2_A 65 EAITARLIALAREGRVVARLKGG 87 (235)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESB
T ss_pred HHHHHHHHHHHHcCCeEEEEcCC
Confidence 46777777777889999999998
No 156
>1vq8_J 50S ribosomal protein L13P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.21.1.1 PDB: 1giy_M 1jj2_I 1k73_K* 1k8a_K* 1k9m_K* 1kc8_K* 1kd1_K* 1kqs_I* 1m1k_K* 1m90_K* 1ml5_m* 1n8r_K* 1nji_K* 1q7y_K* 1q81_K* 1q82_K* 1q86_K* 1qvf_I 1qvg_I 1s72_J* ...
Probab=30.12 E-value=47 Score=24.50 Aligned_cols=68 Identities=16% Similarity=0.168 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEccchHHHhhhhccccccCC-hHHHhhhccCCCcccccccCcchhhhHHhHHHHh
Q psy11676 52 RLASIVEQVAECHLEGRECIMVTSGAVAFGKQKLAQELLMS-LSMRETLSPKDHSRSNHFDSENPKTNIYTHIILM 126 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~eVILVSSGAVaaG~~~L~~~~l~~-~~~~qalaa~~llT~~Df~~r~r~~Na~nTi~~~ 126 (131)
.+..||.+||.+-..|..||+|-.--|. +.-.+..+ +.|..-...-+ |..++..+..-.=++.|+.=|
T Consensus 18 ~LGRLAs~vAk~L~~Gd~VVViNaeki~-----iTG~k~~~K~yy~htg~~g~--~~~~~~~r~P~~i~~~aVrGM 86 (145)
T 1vq8_J 18 IMGRVASQVAEQALDGETVAVVNAERAV-----ITGREEQIVEKYEKRVDIGN--DNGYFYPKRPDGIFKRTIRGM 86 (145)
T ss_dssp BHHHHHHHHHHHHHTTCCEEEECGGGCE-----EESCHHHHHHHHHHHHHCCC--SSCCCCCCSHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHhcCCEEEEEeCEeeE-----ecchhhhheeeeEEeCCCCC--CHHHHhhcChHHHHHHHHHhh
Confidence 4577888888888899999998654321 11111111 23333333333 666666666555555555444
No 157
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=30.09 E-value=68 Score=28.01 Aligned_cols=37 Identities=14% Similarity=0.194 Sum_probs=30.6
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.|.+|.+.|.-||+||-=
T Consensus 251 lLDEPTs~LD~~~~~~l~~~L~~l~~~g~tvIivsHd 287 (607)
T 3bk7_A 251 FFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHD 287 (607)
T ss_dssp EEECTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEecC
Confidence 4465567899998889999999998889999999863
No 158
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=29.86 E-value=57 Score=26.40 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=29.0
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 41 TREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 41 t~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
-++...++|......+++.|.++...|..||++|--
T Consensus 361 lDEp~~~LD~~~~~~l~~~l~~~~~~~~~~ii~th~ 396 (430)
T 1w1w_A 361 LDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLK 396 (430)
T ss_dssp ESSTTTTCCHHHHHHHHHHHHHHCBTTBEEEEECSC
T ss_pred eCCCcccCCHHHHHHHHHHHHHHhcCCCEEEEEECC
Confidence 344456799999999999999887668899998865
No 159
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=29.72 E-value=71 Score=24.48 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=15.6
Q ss_pred HHHHHHHhCCCeEEEEccchH
Q psy11676 58 EQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 58 ~qIa~L~~~G~eVILVSSGAV 78 (131)
.-..+|.++|++|.+++++..
T Consensus 39 ~la~~L~~~GheV~v~~~~~~ 59 (412)
T 3otg_A 39 PLATAARAAGHEVTFATGEGF 59 (412)
T ss_dssp HHHHHHHHTTCEEEEEECGGG
T ss_pred HHHHHHHHCCCEEEEEccHHH
Confidence 344456678999999998753
No 160
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=29.37 E-value=35 Score=24.41 Aligned_cols=22 Identities=14% Similarity=0.137 Sum_probs=18.4
Q ss_pred HHHHHHhCCCeEEEEccchHHH
Q psy11676 59 QVAECHLEGRECIMVTSGAVAF 80 (131)
Q Consensus 59 qIa~L~~~G~eVILVSSGAVaa 80 (131)
.|..|+++|+.+.+||++.-..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~ 75 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAV 75 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHH
T ss_pred HHHHHHHCCCeEEEEeCcChHH
Confidence 4889999999999999876433
No 161
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=29.35 E-value=37 Score=24.66 Aligned_cols=42 Identities=19% Similarity=0.257 Sum_probs=29.9
Q ss_pred ccCCeEEEEe-CccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 26 KYARRLVVKL-GSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 26 ~~~krIVIKi-GSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
.+.|-|++=+ || |.+.+ .+. ..-.+.|.+|+++|+.|+++|-
T Consensus 6 ~~~kli~~DlDGT--Ll~~~--~~~----~~~~~ai~~l~~~Gi~v~l~Tg 48 (268)
T 3qgm_A 6 PDKKGYIIDIDGV--IGKSV--TPI----PEGVEGVKKLKELGKKIIFVSN 48 (268)
T ss_dssp CCCSEEEEECBTT--TEETT--EEC----HHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCEEEEcCcCc--EECCC--EeC----cCHHHHHHHHHHcCCeEEEEeC
Confidence 3467788888 66 44443 232 3457889999999999999976
No 162
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=29.25 E-value=50 Score=28.23 Aligned_cols=48 Identities=10% Similarity=0.205 Sum_probs=40.1
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
+.||+.|.+=-|+=.++ +.=.|..+|.+-.-.|..|.++|-+|||.|-
T Consensus 15 ~gKrVlvRvD~NVP~~~-g~Itdd~RI~a~lpTI~~ll~~gakVil~SH 62 (395)
T 4fey_A 15 KDKKVLVRVDFNVPVKD-GKVTSKVRIEAAIPTIQYILDQGGAVILMSH 62 (395)
T ss_dssp TTCEEEEECCCCCCEET-TEESCCHHHHHTHHHHHHHHHHTCEEEEECC
T ss_pred CCCEEEEEeccCCCCcC-CcCCChHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 57999999998886653 2225788999999999999999999999885
No 163
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=29.22 E-value=49 Score=23.00 Aligned_cols=23 Identities=22% Similarity=0.273 Sum_probs=18.3
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
+.+.+..|+++|+.+.++|++..
T Consensus 113 ~~~~l~~l~~~g~~~~i~t~~~~ 135 (247)
T 3dv9_A 113 ALEVLTKIKSEGLTPMVVTGSGQ 135 (247)
T ss_dssp HHHHHHHHHHTTCEEEEECSCC-
T ss_pred HHHHHHHHHHcCCcEEEEcCCch
Confidence 44567788899999999998853
No 164
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=29.19 E-value=51 Score=22.02 Aligned_cols=23 Identities=9% Similarity=0.254 Sum_probs=18.3
Q ss_pred HHHHHHHHHHhCCCeEEEEccch
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGA 77 (131)
.+.+.+..|++.|+.+.++|++.
T Consensus 86 ~~~~~l~~l~~~g~~~~i~t~~~ 108 (190)
T 2fi1_A 86 GVSDLLEDISNQGGRHFLVSHRN 108 (190)
T ss_dssp THHHHHHHHHHTTCEEEEECSSC
T ss_pred CHHHHHHHHHHCCCcEEEEECCc
Confidence 34566778889999999999864
No 165
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=29.14 E-value=66 Score=24.78 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=28.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCC-CeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEG-RECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G-~eVILVSSG 76 (131)
|.|+...++|...-..+.+.+.++.+++ .-||+||-=
T Consensus 170 llDEPts~LD~~~~~~i~~~l~~l~~~~~~tvi~vtHd 207 (266)
T 4g1u_C 170 FLDEPTSALDLYHQQHTLRLLRQLTRQEPLAVCCVLHD 207 (266)
T ss_dssp EECCCCSSCCHHHHHHHHHHHHHHHHHSSEEEEEECSC
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHcCCCEEEEEEcC
Confidence 4566667899999999999999998765 467777653
No 166
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=28.89 E-value=81 Score=23.46 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=28.3
Q ss_pred CCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHh-CCCeEEEEccc
Q psy11676 28 ARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHL-EGRECIMVTSG 76 (131)
Q Consensus 28 ~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~-~G~eVILVSSG 76 (131)
+.+++|=+|||+ ++ ....|...+..|.+ .|.+|+-+||-
T Consensus 4 M~~v~i~LGSNl---Gd-------~~~~l~~A~~~L~~~~~~~v~~~S~~ 43 (161)
T 3qbc_A 4 MIQAYLGLGSNI---GD-------RESQLNDAIKILNEYDGISVSNISPI 43 (161)
T ss_dssp CEEEEEEEEECS---SS-------HHHHHHHHHHHHHHSTTEEEEEECCC
T ss_pred ccEEEEEEecCc---cC-------HHHHHHHHHHHHhcCCCCceEEECCE
Confidence 568899999986 21 33566667777776 57899999975
No 167
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=28.56 E-value=74 Score=24.28 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=27.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
|-++...++|...-..+.+.+.++.+ |.-||+||-
T Consensus 178 lLDEPts~LD~~~~~~i~~~l~~l~~-~~tviivtH 212 (260)
T 2ghi_A 178 IFDEATSSLDSKTEYLFQKAVEDLRK-NRTLIIIAH 212 (260)
T ss_dssp EEECCCCTTCHHHHHHHHHHHHHHTT-TSEEEEECS
T ss_pred EEECccccCCHHHHHHHHHHHHHhcC-CCEEEEEcC
Confidence 34665678999888889999999865 877777775
No 168
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=28.48 E-value=1.2e+02 Score=21.54 Aligned_cols=46 Identities=13% Similarity=0.009 Sum_probs=31.6
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhC--CCeEEEEccch
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLE--GRECIMVTSGA 77 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~--G~eVILVSSGA 77 (131)
+.+.|||=+|++=+. . ....+...+.+.|..+++. +.+|++++..-
T Consensus 93 ~pd~vvi~~G~ND~~-~----~~~~~~~~l~~~i~~l~~~~p~~~ii~~~~~p 140 (232)
T 1es9_A 93 RPKIVVVWVGTNNHG-H----TAEQVTGGIKAIVQLVNERQPQARVVVLGLLP 140 (232)
T ss_dssp CCSEEEEECCTTCTT-S----CHHHHHHHHHHHHHHHHHHSTTCEEEEECCCC
T ss_pred CCCEEEEEeecCCCC-C----CHHHHHHHHHHHHHHHHHHCCCCeEEEecCCC
Confidence 567899999998554 1 1133456666666677665 78999998764
No 169
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=28.33 E-value=44 Score=23.24 Aligned_cols=23 Identities=22% Similarity=0.208 Sum_probs=18.9
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.+..|+++|+.+.+||++.-
T Consensus 109 ~~~~l~~l~~~g~~~~i~s~~~~ 131 (237)
T 4ex6_A 109 VLEGLDRLSAAGFRLAMATSKVE 131 (237)
T ss_dssp HHHHHHHHHHTTEEEEEECSSCH
T ss_pred HHHHHHHHHhCCCcEEEEcCCCh
Confidence 34667788999999999999854
No 170
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=28.31 E-value=37 Score=24.75 Aligned_cols=21 Identities=19% Similarity=0.126 Sum_probs=17.6
Q ss_pred HHHHHHhCCCeEEEEccchHH
Q psy11676 59 QVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 59 qIa~L~~~G~eVILVSSGAVa 79 (131)
.|..|+++|+++.+||+..-.
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~ 80 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQ 80 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHCCCEEEEEECcCHH
Confidence 388999999999999987543
No 171
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=28.25 E-value=52 Score=24.53 Aligned_cols=24 Identities=8% Similarity=0.023 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhCCCeEEEEccch
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
..+++.+.+..++|++|++++||=
T Consensus 62 ~~~~~~i~~~~~~g~~V~~l~~GD 85 (239)
T 1va0_A 62 EEIHRLLLRHARAHPFVVRLKGGD 85 (239)
T ss_dssp HHHHHHHHHHHHTSSEEEEEESBC
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCC
Confidence 567778888788899999999983
No 172
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=28.21 E-value=48 Score=23.49 Aligned_cols=23 Identities=13% Similarity=0.082 Sum_probs=18.9
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
+.+.+..|+++|+.+.++|++..
T Consensus 117 ~~~~l~~l~~~g~~~~i~sn~~~ 139 (250)
T 3l5k_A 117 AEKLIIHLRKHGIPFALATSSRS 139 (250)
T ss_dssp HHHHHHHHHHTTCCEEEECSCCH
T ss_pred HHHHHHHHHhCCCcEEEEeCCCH
Confidence 44567788899999999999863
No 173
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=28.20 E-value=49 Score=22.67 Aligned_cols=23 Identities=26% Similarity=0.313 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
+.+.+..|++.|+.+.++|.+..
T Consensus 96 ~~~~l~~l~~~g~~~~i~s~~~~ 118 (233)
T 3s6j_A 96 AVELLETLDKENLKWCIATSGGI 118 (233)
T ss_dssp HHHHHHHHHHTTCCEEEECSSCH
T ss_pred HHHHHHHHHHCCCeEEEEeCCch
Confidence 34567888899999999999854
No 174
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=28.18 E-value=57 Score=25.15 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=29.2
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHh-CCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHL-EGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~-~G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.|.++.+ +|.-||+||-=
T Consensus 179 lLDEPts~LD~~~~~~i~~~l~~~~~~~g~tviivtHd 216 (271)
T 2ixe_A 179 ILDNATSALDAGNQLRVQRLLYESPEWASRTVLLITQQ 216 (271)
T ss_dssp EEESTTTTCCHHHHHHHHHHHHHCTTTTTSEEEEECSC
T ss_pred EEECCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCC
Confidence 34666678999988899999998864 48888888864
No 175
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=28.14 E-value=55 Score=21.62 Aligned_cols=23 Identities=17% Similarity=0.045 Sum_probs=17.8
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.+..|++.|+.+.++|++..
T Consensus 90 ~~~~l~~l~~~g~~~~i~s~~~~ 112 (207)
T 2go7_A 90 AREVLAWADESGIQQFIYTHKGN 112 (207)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCT
T ss_pred HHHHHHHHHHCCCeEEEEeCCch
Confidence 44556677889999999999753
No 176
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=28.08 E-value=88 Score=21.59 Aligned_cols=49 Identities=10% Similarity=0.108 Sum_probs=35.0
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCC--CeEEEEccchH
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEG--RECIMVTSGAV 78 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G--~eVILVSSGAV 78 (131)
+.+.|||=+|++=+.... ....+...+.+.|..+++.+ .+|++++..-+
T Consensus 85 ~pd~vvi~~G~ND~~~~~---~~~~~~~~l~~~i~~l~~~~p~~~iil~~~~p~ 135 (214)
T 2hsj_A 85 AVDKIFLLIGTNDIGKDV---PVNEALNNLEAIIQSVARDYPLTEIKLLSILPV 135 (214)
T ss_dssp CCCEEEEECCHHHHHTTC---CHHHHHHHHHHHHHHHHHHCTTCEEEEECCCCC
T ss_pred CCCEEEEEEecCcCCcCC---CHHHHHHHHHHHHHHHHHhCCCCeEEEEecCCC
Confidence 457899999998776421 12334567777777888877 89999987654
No 177
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=28.07 E-value=69 Score=22.44 Aligned_cols=53 Identities=11% Similarity=0.077 Sum_probs=33.4
Q ss_pred HhCCCeEEEEccchHHHhhhhccccccCChHHHhhhccCCCcccccccCcchhhhHHhHHHHhhhc
Q psy11676 64 HLEGRECIMVTSGAVAFGKQKLAQELLMSLSMRETLSPKDHSRSNHFDSENPKTNIYTHIILMFVD 129 (131)
Q Consensus 64 ~~~G~eVILVSSGAVaaG~~~L~~~~l~~~~~~qalaa~~llT~~Df~~r~r~~Na~nTi~~~~~~ 129 (131)
.+.+.||+|+-.|+- .....+...++.|...|.-.. --...||+.|.|+|..+
T Consensus 58 l~~~~evliiGtG~~--------~~~~~~~~~~~~l~~~gI~ve-----~m~T~~A~rtyN~L~~E 110 (122)
T 2ab1_A 58 VEKGVQTLVIGRGMS--------EALKVPSSTVEYLKKHGIDVR-----VLQTEQAVKEYNALVAQ 110 (122)
T ss_dssp HTTCCSEEEEEECSS--------CCSCCCHHHHHHHHHTTCEEE-----EECHHHHHHHHHHHHHT
T ss_pred hhCCCCEEEECCCCC--------CccCCCHHHHHHHHHcCCEEE-----EeCHHHHHHHHHHHHhC
Confidence 446799999999961 111123366777777764311 12356899999998654
No 178
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=27.66 E-value=50 Score=22.69 Aligned_cols=24 Identities=8% Similarity=0.278 Sum_probs=19.2
Q ss_pred HHHHHHHHHhCCCeEEEEccchHH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
..+.+..|++.|+.+.++|++...
T Consensus 101 ~~~~l~~l~~~g~~~~i~s~~~~~ 124 (230)
T 3um9_A 101 VPQALQQLRAAGLKTAILSNGSRH 124 (230)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHH
T ss_pred HHHHHHHHHhCCCeEEEEeCCCHH
Confidence 445677888999999999998643
No 179
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=27.57 E-value=63 Score=26.73 Aligned_cols=37 Identities=16% Similarity=0.265 Sum_probs=30.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhC-CCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLE-GRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~-G~eVILVSSG 76 (131)
|.|+...++|...-..+.+.+.+|.++ |.-||+||==
T Consensus 186 LlDEPTs~LD~~~~~~i~~lL~~l~~~~g~Tii~vTHd 223 (366)
T 3tui_C 186 LCDQATSALDPATTRSILELLKDINRRLGLTILLITHE 223 (366)
T ss_dssp EEESTTTTSCHHHHHHHHHHHHHHHHHSCCEEEEEESC
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEecC
Confidence 456666789999888999999999754 9999998853
No 180
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=27.42 E-value=64 Score=25.42 Aligned_cols=27 Identities=15% Similarity=0.089 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 52 RLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
.+..++.-..+|+++|++|.+++++.-
T Consensus 13 hv~p~~~La~~L~~~Gh~V~v~~~~~~ 39 (404)
T 3h4t_A 13 DTEPLVALAARLRELGADARMCLPPDY 39 (404)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECGGG
T ss_pred cHHHHHHHHHHHHHCCCeEEEEeCHHH
Confidence 344455556677789999999998764
No 181
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=27.30 E-value=73 Score=24.87 Aligned_cols=28 Identities=14% Similarity=0.189 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 51 GRLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 51 ~~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.-+..-..+|.++|++|.++++...
T Consensus 24 GHv~p~l~la~~L~~~Gh~V~~~~~~~~ 51 (424)
T 2iya_A 24 GHVNPSLGIVQELVARGHRVSYAITDEF 51 (424)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred cccchHHHHHHHHHHCCCeEEEEeCHHH
Confidence 3444455555567789999999999864
No 182
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=27.27 E-value=51 Score=24.82 Aligned_cols=24 Identities=21% Similarity=0.090 Sum_probs=19.6
Q ss_pred HHHHHHHHHhCCCeEEEEccchHH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
..+.+..|+++|+.+.+||++.-.
T Consensus 168 ~~~~l~~L~~~g~~~~i~T~~~~~ 191 (287)
T 3a1c_A 168 AKPAVQELKRMGIKVGMITGDNWR 191 (287)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHH
T ss_pred HHHHHHHHHHCCCeEEEEeCCCHH
Confidence 346688899999999999998643
No 183
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=26.83 E-value=79 Score=29.40 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=31.8
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-++.+.++|..-...|.+.+.+|.++|.-||+||-=
T Consensus 831 ILDEPTsGLD~~~~~~L~~lL~~L~~~G~TVIvI~Hd 867 (916)
T 3pih_A 831 ILDEPTVGLHFEDVRKLVEVLHRLVDRGNTVIVIEHN 867 (916)
T ss_dssp EEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 3466667899999999999999999999999999864
No 184
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=26.63 E-value=42 Score=24.09 Aligned_cols=51 Identities=16% Similarity=0.202 Sum_probs=29.6
Q ss_pred hHhhccCCeEEEEe-CccccccCCCCCCcHH-------HHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 22 RGQLKYARRLVVKL-GSAVITREDEHGLALG-------RLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 22 r~~l~~~krIVIKi-GSs~Lt~~~~~~l~~~-------~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
++.++..|-||.=+ || |++.. -.++.. .+.+. ..|..|+++|+++.++|+.
T Consensus 3 ~~~~~~ikliv~D~DGt--L~d~~-~~~~~~g~~~~~f~~~D~-~~L~~Lk~~Gi~~~I~Tg~ 61 (168)
T 3ewi_A 3 KEKLKEIKLLVCNIDGC--LTNGH-IYVSGDQKEIISYDVKDA-IGISLLKKSGIEVRLISER 61 (168)
T ss_dssp ----CCCCEEEEECCCC--CSCSC-CBCCSSCCCEEEEEHHHH-HHHHHHHHTTCEEEEECSS
T ss_pred hhhHhcCcEEEEeCccc--eECCc-EEEcCCCCEEEEEecCcH-HHHHHHHHCCCEEEEEeCc
Confidence 34566778888888 54 55432 111111 11111 2589999999999999998
No 185
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=26.39 E-value=47 Score=22.96 Aligned_cols=24 Identities=13% Similarity=0.068 Sum_probs=19.4
Q ss_pred HHHHHHHHHhCCCeEEEEccchHH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
..+.+..|+++|+.+.++|++...
T Consensus 104 ~~~~l~~l~~~g~~~~i~t~~~~~ 127 (233)
T 3umb_A 104 NVPVLRQLREMGLPLGILSNGNPQ 127 (233)
T ss_dssp HHHHHHHHHTTTCCEEEEESSCHH
T ss_pred HHHHHHHHHhCCCcEEEEeCCCHH
Confidence 345678889999999999998643
No 186
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=26.21 E-value=56 Score=24.71 Aligned_cols=20 Identities=5% Similarity=-0.037 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhCCCeEEEEc
Q psy11676 55 SIVEQVAECHLEGRECIMVT 74 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVS 74 (131)
+.++.+.+..++|+.|+++|
T Consensus 71 ~~~~~i~~~~~~G~~Va~ls 90 (242)
T 1wyz_A 71 EDISGYLKPLAGGASMGVIS 90 (242)
T ss_dssp HHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHcCCEEEEEe
Confidence 33455666667899999998
No 187
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=26.20 E-value=49 Score=23.18 Aligned_cols=25 Identities=20% Similarity=0.242 Sum_probs=19.5
Q ss_pred HHHHHHHHHhCCCeEEEEccchHHH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVAF 80 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVaa 80 (131)
..+.+..|+++|+.+.+||++....
T Consensus 115 ~~~~l~~l~~~g~~~~i~s~~~~~~ 139 (240)
T 3sd7_A 115 MKEILEMLYKNGKILLVATSKPTVF 139 (240)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEHHH
T ss_pred HHHHHHHHHHCCCeEEEEeCCcHHH
Confidence 3456788899999999999985433
No 188
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=25.99 E-value=89 Score=23.57 Aligned_cols=27 Identities=7% Similarity=0.054 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHhCCC--eEEEEccchH
Q psy11676 52 RLASIVEQVAECHLEGR--ECIMVTSGAV 78 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~--eVILVSSGAV 78 (131)
.+..+.+.++++..... +++++|+|+-
T Consensus 50 ~~~~~~~~la~~~g~~~~~~~i~~t~g~t 78 (362)
T 2c0r_A 50 VHNEAQARLLALLGNPTGYKVLFIQGGAS 78 (362)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEESSHHH
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCch
Confidence 45678888888765443 7888877753
No 189
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=25.93 E-value=49 Score=23.55 Aligned_cols=23 Identities=13% Similarity=0.228 Sum_probs=18.2
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.+..|+++|+.+.+||++.-
T Consensus 115 ~~~~l~~l~~~g~~~~i~t~~~~ 137 (240)
T 2hi0_A 115 ILDLMKNLRQKGVKLAVVSNKPN 137 (240)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEH
T ss_pred HHHHHHHHHHCCCEEEEEeCCCH
Confidence 34556778899999999999753
No 190
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=25.82 E-value=98 Score=21.66 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=26.0
Q ss_pred CcHHHHHHHHHHHHHHHhCCCeEEEEccchHHHh
Q psy11676 48 LALGRLASIVEQVAECHLEGRECIMVTSGAVAFG 81 (131)
Q Consensus 48 l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVaaG 81 (131)
++.+.+..+++.+++...++.+|.++-+|.-+..
T Consensus 29 ~~~~~i~~~~~~i~~~i~~~~~I~i~G~G~S~~~ 62 (198)
T 2xbl_A 29 RLLATVRKVADACIASIAQGGKVLLAGNGGSAAD 62 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEECSTHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCEEEEEeCcHhhHH
Confidence 4566788888888887777889999988865443
No 191
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=25.72 E-value=63 Score=26.65 Aligned_cols=27 Identities=11% Similarity=0.031 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 52 RLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
.+..+.+.+..|+++|+.+.+||++.-
T Consensus 216 l~pGv~elL~~Lk~~Gi~laIvTn~~~ 242 (384)
T 1qyi_A 216 PVDEVKVLLNDLKGAGFELGIATGRPY 242 (384)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSSCH
T ss_pred cCcCHHHHHHHHHhCCCEEEEEeCCcH
Confidence 356788889999999999999999954
No 192
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A
Probab=25.64 E-value=1.1e+02 Score=19.76 Aligned_cols=41 Identities=20% Similarity=0.219 Sum_probs=31.3
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVT 74 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVS 74 (131)
..+.+||-...-. .+|..-+..|.+-..+++++|.+++|+.
T Consensus 43 ~~~~vvlDls~v~-------~iDssgl~~L~~~~~~~~~~g~~l~l~~ 83 (99)
T 3oiz_A 43 ALDRVVIDVSRAH-------IWDISSVQALDMAVLKFRREGAEVRIVG 83 (99)
T ss_dssp CCSEEEEEEEEEE-------ECSHHHHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCEEEEECCCCC-------ccCHHHHHHHHHHHHHHHhCCCEEEEEc
Confidence 4567777664322 3667788889999999999999999985
No 193
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=25.64 E-value=84 Score=29.71 Aligned_cols=37 Identities=16% Similarity=0.309 Sum_probs=31.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-++...++|......|.+.|.+|.+.|.-||+||.=
T Consensus 889 ILDEPTsGLD~~~~~~l~~lL~~L~~~G~TVIvisHd 925 (993)
T 2ygr_A 889 ILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIVIEHN 925 (993)
T ss_dssp EEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3455567899999999999999999999999999985
No 194
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=25.51 E-value=85 Score=29.65 Aligned_cols=37 Identities=16% Similarity=0.323 Sum_probs=32.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-++...++|......|.+.|.+|.++|.-||+||.=
T Consensus 871 ILDEPTsGLD~~~~~~l~~lL~~L~~~G~TVIvisHd 907 (972)
T 2r6f_A 871 ILDEPTTGLHVDDIARLLDVLHRLVDNGDTVLVIEHN 907 (972)
T ss_dssp EEECTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4466667899999999999999999999999999886
No 195
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=25.37 E-value=49 Score=25.57 Aligned_cols=27 Identities=22% Similarity=0.267 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 52 RLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
.+.....-..+|+++|++|.+++++..
T Consensus 33 Hv~p~l~La~~L~~~Gh~V~v~~~~~~ 59 (415)
T 3rsc_A 33 LILPTLTVVTELVRRGHRVSYVTAGGF 59 (415)
T ss_dssp HHGGGHHHHHHHHHTTCEEEEEECGGG
T ss_pred ccccHHHHHHHHHHCCCEEEEEeCHHH
Confidence 344444555566789999999998754
No 196
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=25.01 E-value=81 Score=26.17 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=30.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhC-CCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLE-GRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~-G~eVILVSSG 76 (131)
|.|+...++|...-..+.+.|.+|+++ |.-+|+||-=
T Consensus 156 LLDEPts~LD~~~~~~l~~~l~~l~~~~g~tii~vTHd 193 (381)
T 3rlf_A 156 LLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHD 193 (381)
T ss_dssp EEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEECSC
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHhCCCEEEEEECC
Confidence 456666789998888899999999765 9999999964
No 197
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=24.85 E-value=81 Score=24.10 Aligned_cols=27 Identities=15% Similarity=0.265 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 52 RLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
.+.....-+.+|+++|++|.+++++..
T Consensus 14 h~~~~~~la~~L~~~GheV~v~~~~~~ 40 (391)
T 3tsa_A 14 HLMAMVPLCWALQASGHEVLIAAPPEL 40 (391)
T ss_dssp HHHTTHHHHHHHHHTTCEEEEEECHHH
T ss_pred hhhhHHHHHHHHHHCCCEEEEecChhh
Confidence 333444556667889999999998764
No 198
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=24.70 E-value=64 Score=28.28 Aligned_cols=36 Identities=11% Similarity=0.040 Sum_probs=30.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
|-|+...++|......+.+.|.+|.++|.-||+||-
T Consensus 244 llDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtH 279 (608)
T 3j16_B 244 MFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEH 279 (608)
T ss_dssp EEECTTTTCCHHHHHHHHHHHHGGGTTTCEEEEECS
T ss_pred EEECcccCCCHHHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 446556789999888999999999999998888874
No 199
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=24.59 E-value=44 Score=25.72 Aligned_cols=24 Identities=25% Similarity=0.314 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhCCCeEEEEccchH
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
...+.+..|++.|+.+.+||++.-
T Consensus 182 g~~~~l~~L~~~g~~~~ivS~~~~ 205 (335)
T 3n28_A 182 ELPELVATLHAFGWKVAIASGGFT 205 (335)
T ss_dssp THHHHHHHHHHTTCEEEEEEEEEH
T ss_pred CHHHHHHHHHHCCCEEEEEeCCcH
Confidence 345678889999999999998753
No 200
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=24.57 E-value=44 Score=23.62 Aligned_cols=23 Identities=17% Similarity=0.140 Sum_probs=18.3
Q ss_pred HHHHHHHHHHhCCCeEEEEccch
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGA 77 (131)
...+.+..|+++|+.+.+||++.
T Consensus 98 ~~~~~l~~l~~~g~~~~i~t~~~ 120 (241)
T 2hoq_A 98 GARKVLIRLKELGYELGIITDGN 120 (241)
T ss_dssp THHHHHHHHHHHTCEEEEEECSC
T ss_pred cHHHHHHHHHHCCCEEEEEECCC
Confidence 34456778888999999999974
No 201
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=24.55 E-value=69 Score=23.40 Aligned_cols=44 Identities=14% Similarity=0.333 Sum_probs=27.8
Q ss_pred CeEEEEe-CccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHH
Q psy11676 29 RRLVVKL-GSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 29 krIVIKi-GSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
|-|+.=+ || |.+.+ +.++.. ..+.|.+|+++|+.|+++|.-...
T Consensus 6 kli~~DlDGT--Ll~~~-~~i~~~----~~~~l~~l~~~g~~~~i~TGr~~~ 50 (227)
T 1l6r_A 6 RLAAIDVDGN--LTDRD-RLISTK----AIESIRSAEKKGLTVSLLSGNVIP 50 (227)
T ss_dssp CEEEEEHHHH--SBCTT-SCBCHH----HHHHHHHHHHTTCEEEEECSSCHH
T ss_pred EEEEEECCCC--CcCCC-CcCCHH----HHHHHHHHHHCCCEEEEECCCCcH
Confidence 3445555 32 44333 456654 445678888999999999966543
No 202
>4b6a_O 60S ribosomal protein L16-A; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} PDB: 3izc_K 3izs_K 3o58_P 3o5h_P 3u5e_O 3u5i_O 1s1i_M
Probab=24.52 E-value=69 Score=24.88 Aligned_cols=26 Identities=19% Similarity=0.372 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 52 RLASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
.|+.||.+||.....|..||+|-.--
T Consensus 15 vLGRLAS~VAk~L~~Gd~VVVVNaek 40 (199)
T 4b6a_O 15 LLGRLASTIAKQLLNGQKIVVVRAEE 40 (199)
T ss_dssp BHHHHHHHHHHHHHTTCEEEEECGGG
T ss_pred chHHHHHHHHHHhcCCCEEEEEEchh
Confidence 46778888888888899999986543
No 203
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=24.49 E-value=49 Score=22.30 Aligned_cols=23 Identities=22% Similarity=0.206 Sum_probs=18.3
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.+..|+++|+.+.++|++..
T Consensus 81 ~~~~l~~l~~~g~~~~i~T~~~~ 103 (211)
T 1l7m_A 81 AEETIKELKNRGYVVAVVSGGFD 103 (211)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEH
T ss_pred HHHHHHHHHHCCCEEEEEcCCcH
Confidence 45567788889999999998753
No 204
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=24.46 E-value=40 Score=28.64 Aligned_cols=29 Identities=14% Similarity=0.079 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEccchHHH
Q psy11676 52 RLASIVEQVAECHLEGRECIMVTSGAVAF 80 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~eVILVSSGAVaa 80 (131)
-..+.++||.+|.+.|.++|-|+=..-.+
T Consensus 44 D~~atv~Qi~~l~~aG~diVRvavp~~~~ 72 (366)
T 3noy_A 44 DVEATLNQIKRLYEAGCEIVRVAVPHKED 72 (366)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCChHH
Confidence 35799999999999999999998665433
No 205
>1qhf_A Protein (phosphoglycerate mutase); transferase (phosphoryl); HET: 3PG; 1.70A {Saccharomyces cerevisiae} SCOP: c.60.1.1 PDB: 5pgm_D 1bq3_D* 1bq4_D 4pgm_A 3pgm_A*
Probab=24.36 E-value=88 Score=22.90 Aligned_cols=16 Identities=19% Similarity=0.414 Sum_probs=12.7
Q ss_pred hCCCeEEEEccchHHH
Q psy11676 65 LEGRECIMVTSGAVAF 80 (131)
Q Consensus 65 ~~G~eVILVSSGAVaa 80 (131)
..|..|++||.|.+-.
T Consensus 171 ~~~~~vlvVsHg~~i~ 186 (240)
T 1qhf_A 171 LSGKTVMIAAHGNSLR 186 (240)
T ss_dssp HTTCCEEEEECHHHHH
T ss_pred cCCCEEEEEeCHHHHH
Confidence 3578899999998743
No 206
>1e58_A Phosphoglycerate mutase; phosphohistidine, glycolysis and gluconeogenesis, isomerase; HET: NEP; 1.25A {Escherichia coli} SCOP: c.60.1.1 PDB: 1e59_A*
Probab=24.34 E-value=88 Score=23.05 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHH-HH---hCCCeEEEEccchHHH
Q psy11676 50 LGRLASIVEQVAE-CH---LEGRECIMVTSGAVAF 80 (131)
Q Consensus 50 ~~~l~~l~~qIa~-L~---~~G~eVILVSSGAVaa 80 (131)
.+....+...+.+ +. ..|..|++||.|.+-.
T Consensus 154 ~~~~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~~i~ 188 (249)
T 1e58_A 154 ALTIDRVIPYWNETILPRMKSGERVIIAAHGNSLR 188 (249)
T ss_dssp HHHHHHHHHHHHHTHHHHHHTTCCEEEEECHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCCCEEEEEcChHHHH
Confidence 3334444444444 32 3678999999998743
No 207
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=24.26 E-value=66 Score=23.03 Aligned_cols=27 Identities=19% Similarity=0.309 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhCCCeEEEEccchHHHh
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGAVAFG 81 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGAVaaG 81 (131)
...+.+..|+++|+.+.++|++.-..-
T Consensus 148 ~~~~~l~~l~~~g~~~~i~T~~~~~~~ 174 (280)
T 3skx_A 148 ESREAISKLKAIGIKCMMLTGDNRFVA 174 (280)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred hHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence 455667888999999999998865433
No 208
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=24.00 E-value=52 Score=26.87 Aligned_cols=25 Identities=20% Similarity=0.303 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 53 LASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 53 l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
+....+.|..|+++|+.++|||+..
T Consensus 89 ~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 89 YPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred cccHHHHHHHHHHCCCeEEEEeCCc
Confidence 4667888999999999999999964
No 209
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=24.00 E-value=51 Score=26.39 Aligned_cols=27 Identities=15% Similarity=0.130 Sum_probs=21.1
Q ss_pred HHHHHHHHHhCCCeEEEEccchHHHhh
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVAFGK 82 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVaaG~ 82 (131)
..+.+..|+++|+.+.+||+|.-..-.
T Consensus 261 ~~e~l~~Lk~~G~~~~ivS~~~~~~~~ 287 (415)
T 3p96_A 261 ARTTLRTLRRLGYACGVVSGGFRRIIE 287 (415)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEcCCcHHHHH
Confidence 446688899999999999998654433
No 210
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=23.86 E-value=89 Score=25.52 Aligned_cols=37 Identities=19% Similarity=0.160 Sum_probs=30.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhC-CCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLE-GRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~-G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.|.++.++ |.-||+||-=
T Consensus 168 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd 205 (355)
T 1z47_A 168 LFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHD 205 (355)
T ss_dssp EEESTTCCSSHHHHHHHHHHHHHHHHHHTCEEEEECSC
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 456666789998888899999999765 8999999874
No 211
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=23.85 E-value=72 Score=25.35 Aligned_cols=22 Identities=18% Similarity=0.234 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhCCCeEEEEc-cc
Q psy11676 55 SIVEQVAECHLEGRECIMVT-SG 76 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVS-SG 76 (131)
..++.+.+..++|..|++|| +|
T Consensus 76 ~~~~~li~~l~~G~~Va~lsdaG 98 (296)
T 3kwp_A 76 ERIPQLIAKLKQGMQIAQVSDAG 98 (296)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSB
T ss_pred hHhHHHHHHHhcCceEEEeccCC
Confidence 45566666667899999999 77
No 212
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=23.77 E-value=81 Score=26.19 Aligned_cols=38 Identities=11% Similarity=-0.081 Sum_probs=28.1
Q ss_pred eEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEE
Q psy11676 30 RLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIM 72 (131)
Q Consensus 30 rIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVIL 72 (131)
-..+|+|...+... | ...+..|-+.+..+++.|+.|++
T Consensus 117 v~~vKvG~~lf~~~--G---~~gv~~l~~l~~~l~~~g~~Vfl 154 (342)
T 3n3m_A 117 ALTFKMNFAFYIPY--G---SVGIDVLKNVFDYLYELNIPTIL 154 (342)
T ss_dssp CSEEEEEGGGTSTT--T---HHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CcEEEecHHHHHhc--C---HHHHHHHHHHHHHHHhCCCeEEE
Confidence 45899999999864 2 44555666666777778999887
No 213
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=23.77 E-value=59 Score=22.19 Aligned_cols=24 Identities=4% Similarity=0.050 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
....+.+..|++ |+.+.+||++.-
T Consensus 92 ~~~~~~l~~l~~-g~~~~i~t~~~~ 115 (211)
T 2i6x_A 92 AEKFDYIDSLRP-DYRLFLLSNTNP 115 (211)
T ss_dssp HHHHHHHHHHTT-TSEEEEEECCCH
T ss_pred hHHHHHHHHHHc-CCeEEEEeCCCH
Confidence 345666777777 999999998753
No 214
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=23.71 E-value=58 Score=22.08 Aligned_cols=24 Identities=0% Similarity=-0.050 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.+.+..|++.| .+.+||++.-
T Consensus 89 ~~~~~~l~~l~~~g-~~~i~s~~~~ 112 (200)
T 3cnh_A 89 PEVLALARDLGQRY-RMYSLNNEGR 112 (200)
T ss_dssp HHHHHHHHHHTTTS-EEEEEECCCH
T ss_pred ccHHHHHHHHHHcC-CEEEEeCCcH
Confidence 35667788888999 9999999853
No 215
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus}
Probab=23.71 E-value=57 Score=24.75 Aligned_cols=19 Identities=37% Similarity=0.604 Sum_probs=14.8
Q ss_pred HHHHHHHhCCCeEEEEccc
Q psy11676 58 EQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 58 ~qIa~L~~~G~eVILVSSG 76 (131)
+.+.+..++|..|++++||
T Consensus 69 ~~li~~~~~G~~Vv~L~~G 87 (251)
T 3nut_A 69 THALEMAAEGRRVVVVSSG 87 (251)
T ss_dssp HHHHHHHHTTCEEEEEESB
T ss_pred HHHHHHHHCCCeEEEEeCC
Confidence 4455555689999999998
No 216
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=23.69 E-value=61 Score=23.53 Aligned_cols=22 Identities=14% Similarity=0.306 Sum_probs=18.3
Q ss_pred HHHHHHHHHhCCCeEEEEccch
Q psy11676 56 IVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGA 77 (131)
..+.+..|+++|+.+.+||++.
T Consensus 111 ~~~~l~~l~~~g~~~~i~tn~~ 132 (263)
T 3k1z_A 111 AEDTLRECRTRGLRLAVISNFD 132 (263)
T ss_dssp HHHHHHHHHHTTCEEEEEESCC
T ss_pred HHHHHHHHHhCCCcEEEEeCCc
Confidence 3566788899999999999874
No 217
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=23.67 E-value=1.1e+02 Score=22.24 Aligned_cols=43 Identities=14% Similarity=0.281 Sum_probs=27.4
Q ss_pred CCeEEEEe-CccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 28 ARRLVVKL-GSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 28 ~krIVIKi-GSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
.|-|+.=+ || |.+.+ ..+.. ...+.|.+++++|+.++++|.=.
T Consensus 5 ~kli~fDlDGT--Ll~~~-~~i~~----~~~~al~~l~~~G~~~~iaTGR~ 48 (279)
T 4dw8_A 5 YKLIVLDLDGT--LTNSK-KEISS----RNRETLIRIQEQGIRLVLASGRP 48 (279)
T ss_dssp CCEEEECCCCC--CSCTT-SCCCH----HHHHHHHHHHHTTCEEEEECSSC
T ss_pred ceEEEEeCCCC--CCCCC-CccCH----HHHHHHHHHHHCCCEEEEEcCCC
Confidence 34555555 43 44443 35665 44566778889999999988543
No 218
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=23.66 E-value=54 Score=25.16 Aligned_cols=24 Identities=4% Similarity=0.130 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEccch
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
....+.|..|+++|+.+.+||+..
T Consensus 104 pg~~e~L~~L~~~Gi~i~iaTnr~ 127 (258)
T 2i33_A 104 PGSIDFLKYTESKGVDIYYISNRK 127 (258)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred ccHHHHHHHHHHCCCEEEEEcCCc
Confidence 345677889999999999999986
No 219
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=23.34 E-value=67 Score=21.92 Aligned_cols=23 Identities=9% Similarity=0.034 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhCCCeEEEEccch
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGA 77 (131)
...+.+..|++.|+.+.++|++.
T Consensus 103 ~~~~~l~~l~~~g~~~~i~t~~~ 125 (235)
T 2om6_A 103 GTKEALQFVKERGLKTAVIGNVM 125 (235)
T ss_dssp THHHHHHHHHHTTCEEEEEECCC
T ss_pred cHHHHHHHHHHCCCEEEEEcCCc
Confidence 34455677888999999999875
No 220
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=23.34 E-value=61 Score=22.43 Aligned_cols=23 Identities=13% Similarity=0.055 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhCCCeEEEEccch
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGA 77 (131)
...+.+..|+++|+.+.++|++.
T Consensus 96 ~~~~~l~~l~~~g~~~~i~t~~~ 118 (233)
T 3nas_A 96 GIGRLLCQLKNENIKIGLASSSR 118 (233)
T ss_dssp THHHHHHHHHHTTCEEEECCSCT
T ss_pred CHHHHHHHHHHCCCcEEEEcCch
Confidence 34566788889999999999974
No 221
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=23.33 E-value=82 Score=24.07 Aligned_cols=45 Identities=13% Similarity=0.261 Sum_probs=29.8
Q ss_pred CeEEEEe-CccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccchHH
Q psy11676 29 RRLVVKL-GSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 29 krIVIKi-GSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
|-|+.=+ || +|...+ +.++.. ..+.|.+|+++|+.|+++|.=...
T Consensus 28 kli~~DlDGT-Ll~~~~-~~is~~----~~~al~~l~~~Gi~v~iaTGR~~~ 73 (301)
T 2b30_A 28 KLLLIDFDGT-LFVDKD-IKVPSE----NIDAIKEAIEKGYMVSICTGRSKV 73 (301)
T ss_dssp CEEEEETBTT-TBCCTT-TCSCHH----HHHHHHHHHHHTCEEEEECSSCHH
T ss_pred cEEEEECCCC-CcCCCC-CccCHH----HHHHHHHHHHCCCEEEEEcCCCHH
Confidence 6677777 54 333313 356654 346677888899999999866543
No 222
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=23.32 E-value=52 Score=24.87 Aligned_cols=21 Identities=10% Similarity=0.200 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCCeEEEEccc
Q psy11676 56 IVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSG 76 (131)
..+.+..|++.|+.|++||-|
T Consensus 146 ~~e~i~~l~~~gi~v~ivSgg 166 (297)
T 4fe3_A 146 YENFFGKLQQHGIPVFIFSAG 166 (297)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHcCCeEEEEeCC
Confidence 467788999999999999987
No 223
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=23.15 E-value=52 Score=24.30 Aligned_cols=21 Identities=5% Similarity=0.001 Sum_probs=18.0
Q ss_pred HHHHHHhCCCeEEEEccchHH
Q psy11676 59 QVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 59 qIa~L~~~G~eVILVSSGAVa 79 (131)
.|..|+++|+++.++|+..-.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~ 104 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAK 104 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHCCCEEEEEeCCCHH
Confidence 788999999999999987543
No 224
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=23.00 E-value=1.1e+02 Score=23.89 Aligned_cols=46 Identities=9% Similarity=0.107 Sum_probs=32.1
Q ss_pred cCCeEEEEeCccccccCCCCCCc-HHHHHHHHHHHHHHHhC--CCeEEEEcc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLA-LGRLASIVEQVAECHLE--GRECIMVTS 75 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~-~~~l~~l~~qIa~L~~~--G~eVILVSS 75 (131)
+...|||-+|+|=+.... .. ..+..++.+-|..+++. +-+|++++.
T Consensus 213 ~PdlVvI~lGtND~~~~~---~~~~~~~~~l~~li~~ir~~~p~a~Iil~~p 261 (341)
T 2wao_A 213 VPQVVVINLGTNDFSTSF---ADKTKFVTAYKNLISEVRRNYPDAHIFCCVG 261 (341)
T ss_dssp CCSEEEEECCHHHHSSSC---CCHHHHHHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCEEEEeCccccCCCCC---CCHHHHHHHHHHHHHHHHHHCCCCeEEEEeC
Confidence 457899999999776432 23 44556677777777765 468888874
No 225
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=22.87 E-value=56 Score=25.84 Aligned_cols=21 Identities=19% Similarity=0.204 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCeEEEEccch
Q psy11676 57 VEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 57 ~~qIa~L~~~G~eVILVSSGA 77 (131)
.+.+..|+++|++|++||+-.
T Consensus 107 ~ell~~L~~~G~~i~ivTgR~ 127 (260)
T 3pct_A 107 VEFSNYVNANGGTMFFVSNRR 127 (260)
T ss_dssp HHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEeCCC
Confidence 345889999999999999763
No 226
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1
Probab=22.74 E-value=1.8e+02 Score=24.99 Aligned_cols=47 Identities=6% Similarity=0.098 Sum_probs=38.9
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCe-EEEEc
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRE-CIMVT 74 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~e-VILVS 74 (131)
..||+++.+==|+=.++ +.=.|..+|...+-.|..|.++|-+ |||.|
T Consensus 359 ~gk~vl~RvD~NvP~~~-g~i~d~~Ri~~~~pti~~l~~~gak~vvl~s 406 (416)
T 1fw8_A 359 KDKRVFIRVDFNVPLDG-KKITSNQRIVAALPTIKYVLEHHPRYVVLAS 406 (416)
T ss_dssp TTCEEEEECCCCCCBSS-SSBSCTHHHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred ccccceeccccccCccC-CcccchHHHHHHhHHHHHHHHCCCceEEEec
Confidence 57999999988887764 2336889999999999999999997 66665
No 227
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=22.48 E-value=76 Score=22.28 Aligned_cols=23 Identities=22% Similarity=0.212 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCCeEEEEccchH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.+..|+++|+.+.++|++..
T Consensus 114 ~~~~l~~l~~~g~~~~i~t~~~~ 136 (243)
T 3qxg_A 114 AWELLQKVKSEGLTPMVVTGSGQ 136 (243)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCC
T ss_pred HHHHHHHHHHcCCcEEEEeCCcH
Confidence 34557788899999999998863
No 228
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=22.35 E-value=76 Score=22.41 Aligned_cols=22 Identities=14% Similarity=-0.133 Sum_probs=18.0
Q ss_pred HHHHHHHHhCCCeEEEEccchH
Q psy11676 57 VEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 57 ~~qIa~L~~~G~eVILVSSGAV 78 (131)
.+.+..|+++|+.+.++|++.-
T Consensus 117 ~~~l~~l~~~g~~~~i~tn~~~ 138 (277)
T 3iru_A 117 KEVFDKLIAQGIKVGGNTGYGP 138 (277)
T ss_dssp HHHHHHHHHTTCEEEEECSSCH
T ss_pred HHHHHHHHHcCCeEEEEeCCch
Confidence 4557788899999999998854
No 229
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=22.16 E-value=91 Score=25.31 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=29.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHh-CCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHL-EGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~-~G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.+.++++ .|.-+|+||-=
T Consensus 150 LLDEP~s~LD~~~~~~l~~~l~~l~~~~g~tii~vTHd 187 (348)
T 3d31_A 150 LLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHD 187 (348)
T ss_dssp EEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEECccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 44555678999888899999999975 48889998864
No 230
>3r8s_J 50S ribosomal protein L13; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_H 1p86_H 1vs8_J 1vs6_J 2aw4_J 2awb_J 2gya_H 2gyc_H 1vt2_J 2i2v_J 2i2t_J* 2qao_J* 2qba_J* 2qbc_J* 2qbe_J 2qbg_J 2qbi_J* 2qbk_J* 2qov_J 2qox_J ...
Probab=22.13 E-value=89 Score=22.97 Aligned_cols=26 Identities=15% Similarity=0.233 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHh------------CCCeEEEEccch
Q psy11676 52 RLASIVEQVAECHL------------EGRECIMVTSGA 77 (131)
Q Consensus 52 ~l~~l~~qIa~L~~------------~G~eVILVSSGA 77 (131)
.|+.||.+||.+.. .|..||+|-.--
T Consensus 24 ~LGRLAs~iAk~L~GKhKp~ytP~~d~Gd~VVViNaek 61 (142)
T 3r8s_J 24 TLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADK 61 (142)
T ss_dssp BHHHHHHHHHHHHHTTTSTTCCTTSCCCCEEEEECGGG
T ss_pred chHHHHHHHHHHHcCCCCCccCCCccCCCEEEEEeCcc
Confidence 45778888888877 899999985443
No 231
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=22.02 E-value=1.2e+02 Score=23.70 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 51 GRLASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 51 ~~l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
..+.-+..-..+|.++|++|.++++...
T Consensus 12 GHv~P~l~la~~L~~~Gh~V~~~~~~~~ 39 (415)
T 1iir_A 12 GDTEPLVALAVRVRDLGADVRMCAPPDC 39 (415)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred hhHHHHHHHHHHHHHCCCeEEEEcCHHH
Confidence 3444555555567789999999999863
No 232
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=21.96 E-value=50 Score=22.68 Aligned_cols=24 Identities=17% Similarity=0.101 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCeEEEEccchHH
Q psy11676 56 IVEQVAECHLEGRECIMVTSGAVA 79 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGAVa 79 (131)
..+.+..|+++|+.+.++|++...
T Consensus 91 ~~~~l~~l~~~g~~~~i~t~~~~~ 114 (226)
T 3mc1_A 91 IEALLSSLKDYGFHLVVATSKPTV 114 (226)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEHH
T ss_pred HHHHHHHHHHCCCeEEEEeCCCHH
Confidence 345667788889999999998543
No 233
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=21.95 E-value=55 Score=24.31 Aligned_cols=50 Identities=12% Similarity=0.031 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhCCCeEEEEccchHHHhhhhccccccCChHHHhhhccCCCccccccc
Q psy11676 55 SIVEQVAECHLEGRECIMVTSGAVAFGKQKLAQELLMSLSMRETLSPKDHSRSNHFD 111 (131)
Q Consensus 55 ~l~~qIa~L~~~G~eVILVSSGAVaaG~~~L~~~~l~~~~~~qalaa~~llT~~Df~ 111 (131)
..++-..+++++|..||.|||....... + +++.+++ -.++.|++.-.|+.
T Consensus 92 ~~ie~A~~ake~G~~vIaITs~~~~~~~---~-~~L~d~a---n~~p~gll~~e~g~ 141 (170)
T 3jx9_A 92 DLLASLARYDAWHTPYSIITLGDVTETL---E-RSIAPLA---LKFDKGLLPAEDGS 141 (170)
T ss_dssp HHHHHHHHHHHHTCCEEEEESSCCCTTG---G-GSSSCEE---CCCCSCSEECTTSC
T ss_pred HHHHHHHHHHHCCCcEEEEeCcchhccc---c-CcHHHHH---hCCCCCceECCCCC
Confidence 3456666778899999999994321111 1 3566655 66667776655544
No 234
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=21.82 E-value=64 Score=23.79 Aligned_cols=46 Identities=20% Similarity=0.259 Sum_probs=29.3
Q ss_pred HhhccCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEcc
Q psy11676 23 GQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 23 ~~l~~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSS 75 (131)
..+...|-|+.=+- .+|.+.+ .+ +....+.|.+|+++|++|+++|.
T Consensus 9 ~~~~~~k~i~~D~D-GtL~~~~--~~----~~~~~~~l~~l~~~g~~~~~~Tn 54 (284)
T 2hx1_A 9 SLLPKYKCIFFDAF-GVLKTYN--GL----LPGIENTFDYLKAQGQDYYIVTN 54 (284)
T ss_dssp HHGGGCSEEEECSB-TTTEETT--EE----CTTHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHhcCCEEEEcCc-CCcCcCC--ee----ChhHHHHHHHHHHCCCEEEEEeC
Confidence 34556677777663 2344332 12 23445678889999999999994
No 235
>2hhj_A Bisphosphoglycerate mutase; isomerase; HET: NEP DG2 3PG; 1.50A {Homo sapiens} SCOP: c.60.1.1 PDB: 1t8p_A* 2f90_A* 2a9j_A* 2h4z_A* 2h52_A* 2h4x_A* 3nfy_A
Probab=21.76 E-value=83 Score=23.68 Aligned_cols=17 Identities=18% Similarity=0.411 Sum_probs=13.4
Q ss_pred hCCCeEEEEccchHHHh
Q psy11676 65 LEGRECIMVTSGAVAFG 81 (131)
Q Consensus 65 ~~G~eVILVSSGAVaaG 81 (131)
..|..|++||.|.+-..
T Consensus 178 ~~~~~vlvVsHg~~ir~ 194 (267)
T 2hhj_A 178 LRGKTILISAHGNSSRA 194 (267)
T ss_dssp HTTCCEEEEECHHHHHH
T ss_pred cCCCEEEEEcCcHHHHH
Confidence 46889999999987443
No 236
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=21.69 E-value=60 Score=27.03 Aligned_cols=50 Identities=14% Similarity=0.130 Sum_probs=28.7
Q ss_pred hccCCeEEEEeCccccccCC--------C------CCCcHHHHHHHHHHHHHHHhCCCeEEE--Eccc
Q psy11676 25 LKYARRLVVKLGSAVITRED--------E------HGLALGRLASIVEQVAECHLEGRECIM--VTSG 76 (131)
Q Consensus 25 l~~~krIVIKiGSs~Lt~~~--------~------~~l~~~~l~~l~~qIa~L~~~G~eVIL--VSSG 76 (131)
+.+..-=++||||.-+++-. + .|+ ..|+++-..+..+++.|.+|+| ++|+
T Consensus 107 l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGm--stl~Ei~~Ave~i~~~g~~viLlhC~s~ 172 (350)
T 3g8r_A 107 IEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAG--ARREDIDKVVSFMLHRGKDLTIMHCVAE 172 (350)
T ss_dssp HHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTT--CCHHHHHHHHHHHHTTTCCEEEEECCCC
T ss_pred HHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCC--CCHHHHHHHHHHHHHcCCCEEEEecCCC
Confidence 34444557888887766510 0 011 1344555555666677888888 7765
No 237
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=21.69 E-value=1e+02 Score=26.34 Aligned_cols=37 Identities=8% Similarity=0.133 Sum_probs=30.5
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHH-hCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECH-LEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~-~~G~eVILVSSG 76 (131)
|-++...++|......+.+.|.++. +.|.-||+||.=
T Consensus 424 lLDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vsHd 461 (538)
T 1yqt_A 424 LLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHD 461 (538)
T ss_dssp EEECTTTTCCHHHHHHHHHHHHHHHHHHTCEEEEECSC
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3455567899999999999999986 469999999985
No 238
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=21.68 E-value=1.1e+02 Score=28.90 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=31.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLEGRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVSSG 76 (131)
|-++...+||..-...|.+.+.+|++.|.-||+||==
T Consensus 546 ILDEPTagLdp~~~~~L~~~L~~Lr~~G~TVIvVeHd 582 (993)
T 2ygr_A 546 VLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHD 582 (993)
T ss_dssp EEECTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEeCcccCCCHHHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 3455557799999999999999999999999998843
No 239
>2ftc_H L13MT, MRP-L13, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=21.58 E-value=81 Score=23.31 Aligned_cols=25 Identities=4% Similarity=0.056 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHh------------CCCeEEEEccc
Q psy11676 52 RLASIVEQVAECHL------------EGRECIMVTSG 76 (131)
Q Consensus 52 ~l~~l~~qIa~L~~------------~G~eVILVSSG 76 (131)
.|+.||.+||.+.. .|..||+|-.-
T Consensus 27 ~LGRLAs~iA~~L~GKhKp~ytP~~D~Gd~VVViNae 63 (148)
T 2ftc_H 27 PPGKLAAMASIRLQGLHKPVYHALSDCGDHVVIMNTR 63 (148)
T ss_pred chHHHHHHHHHHHhccCCCCcCccccCCCEEEEEece
Confidence 56788889998877 89999998544
No 240
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=21.58 E-value=83 Score=22.86 Aligned_cols=27 Identities=7% Similarity=0.110 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhCCC--eEEEEccchHHH
Q psy11676 54 ASIVEQVAECHLEGR--ECIMVTSGAVAF 80 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~--eVILVSSGAVaa 80 (131)
..+.+.+..|+++|+ .+.++|++.-..
T Consensus 145 p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~ 173 (282)
T 3nuq_A 145 IPLRNMLLRLRQSGKIDKLWLFTNAYKNH 173 (282)
T ss_dssp HHHHHHHHHHHHSSSCSEEEEECSSCHHH
T ss_pred hhHHHHHHHHHhCCCCceEEEEECCChHH
Confidence 346677888899999 999999986433
No 241
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=21.38 E-value=1.1e+02 Score=23.99 Aligned_cols=26 Identities=15% Similarity=0.026 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 52 RLASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
.+.-+..-..+|.++|++|.++++..
T Consensus 13 H~~p~l~la~~L~~~Gh~V~~~~~~~ 38 (416)
T 1rrv_A 13 DVEIGVALADRLKALGVQTRMCAPPA 38 (416)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred cHHHHHHHHHHHHHCCCeEEEEeCHH
Confidence 44444444556667999999999886
No 242
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=21.17 E-value=98 Score=25.31 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=29.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhC-CCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLE-GRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~-G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.|.+++++ |.-||+||-=
T Consensus 162 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd 199 (372)
T 1g29_1 162 LMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHD 199 (372)
T ss_dssp EEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred EECCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 456656789998888899999999765 8899999864
No 243
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=21.15 E-value=17 Score=25.61 Aligned_cols=22 Identities=9% Similarity=0.215 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEcc
Q psy11676 54 ASIVEQVAECHLEGRECIMVTS 75 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSS 75 (131)
..+.+.+.+++++|.-||+||-
T Consensus 136 ~~l~~~l~~l~~~g~tvi~vtH 157 (171)
T 4gp7_A 136 QQMKKSIKGLQREGFRYVYILN 157 (171)
T ss_dssp HHHHHHSTTHHHHTCSEEEEEC
T ss_pred HHhhhhhhhHHhcCCcEEEEeC
Confidence 5556666667777999999885
No 244
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=21.12 E-value=2.2e+02 Score=21.86 Aligned_cols=64 Identities=5% Similarity=0.019 Sum_probs=36.1
Q ss_pred hhhccCcchh--HhhccCCeEEEEe---Cccccc--cCC-CCCCcHHHHHHHHHHHHHHHhC-CCeEEEEccc
Q psy11676 13 RRRVTSFSDR--GQLKYARRLVVKL---GSAVIT--RED-EHGLALGRLASIVEQVAECHLE-GRECIMVTSG 76 (131)
Q Consensus 13 ~~~~~~~~~r--~~l~~~krIVIKi---GSs~Lt--~~~-~~~l~~~~l~~l~~qIa~L~~~-G~eVILVSSG 76 (131)
|.|-.|+|-. ....+.+.|.+.. |-.+|+ +++ ...++.+.+.+|.+.+.++... ..++|++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 77 (263)
T 2j5g_A 5 HHHHHHMTLNQPEYFTKYENLHFHRDENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGS 77 (263)
T ss_dssp ----------CCGGGGSCTTEEEEECTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECB
T ss_pred cccccccCCCcccccCCCCeEEEEEcCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECC
Confidence 3444555553 3345566677765 234444 332 1248899999999999998764 5788888864
No 245
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=21.05 E-value=58 Score=23.09 Aligned_cols=24 Identities=13% Similarity=0.349 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
....+.+..|+++| .+.+||++.-
T Consensus 99 ~g~~~~l~~l~~~g-~~~i~Tn~~~ 122 (231)
T 2p11_A 99 PGALNALRHLGARG-PTVILSDGDV 122 (231)
T ss_dssp TTHHHHHHHHHTTS-CEEEEEECCS
T ss_pred ccHHHHHHHHHhCC-CEEEEeCCCH
Confidence 34567788889999 8999999853
No 246
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=20.99 E-value=1.3e+02 Score=19.90 Aligned_cols=45 Identities=13% Similarity=0.243 Sum_probs=33.2
Q ss_pred cCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEc-cchH
Q psy11676 27 YARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLEGRECIMVT-SGAV 78 (131)
Q Consensus 27 ~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVS-SGAV 78 (131)
..+.+|+-...- ..+|..-+..|.+-..+++++|.+++|+. ++.|
T Consensus 48 ~~~~vvlDls~v-------~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~~v 93 (130)
T 4dgh_A 48 TPQILILRLKWV-------PFMDITGIQTLEEMIQSFHKRGIKVLISGANSRV 93 (130)
T ss_dssp CCSEEEEECTTC-------CCCCHHHHHHHHHHHHHHHTTTCEEEEECCCHHH
T ss_pred CCCEEEEECCCC-------CcccHHHHHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 456677766421 23678888999999999999999999985 4444
No 247
>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae}
Probab=20.95 E-value=63 Score=24.40 Aligned_cols=20 Identities=10% Similarity=0.150 Sum_probs=15.0
Q ss_pred HHHHHHHhCCCeEEEEccch
Q psy11676 58 EQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 58 ~qIa~L~~~G~eVILVSSGA 77 (131)
+.|.+..++|+.|++++||=
T Consensus 93 ~~i~~~~~~g~~Vv~l~~GD 112 (251)
T 2npn_A 93 STIRERTPDDGAVAFLVWGD 112 (251)
T ss_dssp HHHHHHSCTTCEEEEEESBC
T ss_pred HHHHHHHHCCCeEEEEeCCC
Confidence 35555556799999999993
No 248
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=20.87 E-value=71 Score=21.93 Aligned_cols=23 Identities=9% Similarity=-0.081 Sum_probs=18.3
Q ss_pred HHHHHHHHHhC-CCeEEEEccchH
Q psy11676 56 IVEQVAECHLE-GRECIMVTSGAV 78 (131)
Q Consensus 56 l~~qIa~L~~~-G~eVILVSSGAV 78 (131)
+.+.+..|+++ |+.+.+||++.-
T Consensus 98 ~~~~l~~l~~~~g~~~~i~t~~~~ 121 (234)
T 2hcf_A 98 VRELLDALSSRSDVLLGLLTGNFE 121 (234)
T ss_dssp HHHHHHHHHTCTTEEEEEECSSCH
T ss_pred HHHHHHHHHhCCCceEEEEcCCcH
Confidence 44567778888 999999999854
No 249
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=20.78 E-value=1.3e+02 Score=24.48 Aligned_cols=53 Identities=9% Similarity=0.142 Sum_probs=38.1
Q ss_pred HhhccCCeEEEEeCccccccCCCCCCcHHHHHHHHHHHHHHHhC---CCeEEEEccchH
Q psy11676 23 GQLKYARRLVVKLGSAVITREDEHGLALGRLASIVEQVAECHLE---GRECIMVTSGAV 78 (131)
Q Consensus 23 ~~l~~~krIVIKiGSs~Lt~~~~~~l~~~~l~~l~~qIa~L~~~---G~eVILVSSGAV 78 (131)
+.+.++.-|+|=+++..- .+ +.+|+..+.+.+++|+..... |.=||..|+..+
T Consensus 72 ~~~~~aDvviiaVptp~~--~~-~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~ 127 (436)
T 1mv8_A 72 KAVLDSDVSFICVGTPSK--KN-GDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLP 127 (436)
T ss_dssp HHHHTCSEEEECCCCCBC--TT-SSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCT
T ss_pred HHhccCCEEEEEcCCCcc--cC-CCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCC
Confidence 357789999999988753 33 468999999999999987776 554554444433
No 250
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=20.65 E-value=75 Score=22.73 Aligned_cols=47 Identities=15% Similarity=0.104 Sum_probs=31.0
Q ss_pred CeEEEEccchHHHhhhhccccccCChHHHhhhccCCCcccccccCcchhhhHHhHHHHhhh
Q psy11676 68 RECIMVTSGAVAFGKQKLAQELLMSLSMRETLSPKDHSRSNHFDSENPKTNIYTHIILMFV 128 (131)
Q Consensus 68 ~eVILVSSGAVaaG~~~L~~~~l~~~~~~qalaa~~llT~~Df~~r~r~~Na~nTi~~~~~ 128 (131)
.||+|+-+|+- +. +.+...++.|...|.-.. --...||+.|.|+|.-
T Consensus 68 pevliiGTG~~--------~~-~l~p~l~~~l~~~GI~vE-----~M~T~aAcrTyNiL~~ 114 (135)
T 2fvt_A 68 IDTLIVGTGAD--------VW-IAPRQLREALRGVNVVLD-----TMQTGPAIRTYNIMIG 114 (135)
T ss_dssp CSEEEEECTTS--------CC-CCCHHHHHHHHTTTCEEE-----EECHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCC--------CC-cCCHHHHHHHHHcCCEEE-----EeCHHHHHHHHHHHHh
Confidence 89999999962 12 233467778877775311 1123589999999864
No 251
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=20.62 E-value=83 Score=21.21 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=17.3
Q ss_pred HHHHHHHHHhCCCeEEEEccch
Q psy11676 56 IVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 56 l~~qIa~L~~~G~eVILVSSGA 77 (131)
..+.+..|++.|+.++++|++.
T Consensus 99 ~~~~l~~l~~~g~~~~i~t~~~ 120 (226)
T 1te2_A 99 VREAVALCKEQGLLVGLASASP 120 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEESSC
T ss_pred HHHHHHHHHHCCCcEEEEeCCc
Confidence 3445677888999999999875
No 252
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=20.59 E-value=57 Score=25.80 Aligned_cols=20 Identities=15% Similarity=0.037 Sum_probs=17.1
Q ss_pred HHHHHHHhCCCeEEEEccch
Q psy11676 58 EQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 58 ~qIa~L~~~G~eVILVSSGA 77 (131)
+.+..|+++|++|++||+-.
T Consensus 108 ell~~L~~~G~ki~ivTgR~ 127 (262)
T 3ocu_A 108 EFNNYVNSHNGKVFYVTNRK 127 (262)
T ss_dssp HHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEeCCC
Confidence 44889999999999999763
No 253
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=20.52 E-value=1.1e+02 Score=25.08 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=30.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhC-CCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLE-GRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~-G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.+.+++++ |.-+|+||-=
T Consensus 156 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd 193 (359)
T 2yyz_A 156 LFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHD 193 (359)
T ss_dssp EEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEEESC
T ss_pred EEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 456666789998888899999998765 8899999875
No 254
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=20.50 E-value=66 Score=25.82 Aligned_cols=30 Identities=23% Similarity=0.360 Sum_probs=23.1
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEc
Q psy11676 39 VITREDEHGLALGRLASIVEQVAECHLEGRECIMVT 74 (131)
Q Consensus 39 ~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVS 74 (131)
+||++| |+.-+-|..|++.+.+ +++|++|-
T Consensus 15 LlTNDD--Gi~apGi~aL~~~l~~----~~~V~VVA 44 (261)
T 3ty2_A 15 LLSNDD--GVYAKGLAILAKTLAD----LGEVDVVA 44 (261)
T ss_dssp EEECSS--CTTCHHHHHHHHHHTT----TSEEEEEE
T ss_pred EEEcCC--CCCCHHHHHHHHHHHh----cCCEEEEe
Confidence 467765 5888889999887763 68999985
No 255
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=20.50 E-value=75 Score=24.88 Aligned_cols=24 Identities=17% Similarity=0.246 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhCCCeEEEEccch
Q psy11676 54 ASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 54 ~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
+++++.|.+..++|..|+++.||=
T Consensus 89 ~~i~~~l~~~~~~G~~Vv~L~~GD 112 (294)
T 2ybo_A 89 EEINELLVRLARQQRRVVRLKGGD 112 (294)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEBC
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCC
Confidence 567777777778899999999883
No 256
>3iz5_K 60S ribosomal protein L13A (L13P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_K
Probab=20.35 E-value=87 Score=24.42 Aligned_cols=26 Identities=23% Similarity=0.341 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEccch
Q psy11676 52 RLASIVEQVAECHLEGRECIMVTSGA 77 (131)
Q Consensus 52 ~l~~l~~qIa~L~~~G~eVILVSSGA 77 (131)
.|+.||.+||.+...|..||+|-.--
T Consensus 20 ~LGRLAS~VAk~Ll~Gd~VVVINAek 45 (206)
T 3iz5_K 20 MLGRLASIVAKELLNGQRVVVVRCEE 45 (206)
T ss_dssp BHHHHHHHHHHHHHTTCCEEEECGGG
T ss_pred chHHHHHHHHHHHhCCCEEEEEcCcc
Confidence 45778888888667899999985443
No 257
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=20.32 E-value=61 Score=23.27 Aligned_cols=26 Identities=8% Similarity=0.097 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccchH
Q psy11676 53 LASIVEQVAECHLEGRECIMVTSGAV 78 (131)
Q Consensus 53 l~~l~~qIa~L~~~G~eVILVSSGAV 78 (131)
+....+.+..|+++|+.+.+||+..-
T Consensus 38 ~pg~~e~L~~L~~~g~~~~i~T~~~~ 63 (196)
T 2oda_A 38 TPGAQNALKALRDQGMPCAWIDELPE 63 (196)
T ss_dssp CTTHHHHHHHHHHHTCCEEEECCSCH
T ss_pred CcCHHHHHHHHHHCCCEEEEEcCChH
Confidence 35667788889999999999997643
No 258
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=20.29 E-value=67 Score=25.16 Aligned_cols=30 Identities=17% Similarity=0.356 Sum_probs=22.3
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHHHHhCCCeEEEEc
Q psy11676 39 VITREDEHGLALGRLASIVEQVAECHLEGRECIMVT 74 (131)
Q Consensus 39 ~Lt~~~~~~l~~~~l~~l~~qIa~L~~~G~eVILVS 74 (131)
+||++| |++-+-|..|++.+. +.| +|++|-
T Consensus 5 LlTNDD--Gi~apGi~~L~~~l~---~~g-~V~VvA 34 (251)
T 2wqk_A 5 LLVNDD--GYFSPGINALREALK---SLG-RVVVVA 34 (251)
T ss_dssp EEECSS--CTTCHHHHHHHHHHT---TTS-EEEEEE
T ss_pred EEEcCC--CCCcHHHHHHHHHHH---hCC-CEEEEe
Confidence 467775 588889999988765 456 688873
No 259
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=20.01 E-value=1.1e+02 Score=25.14 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=30.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHhC-CCeEEEEccc
Q psy11676 40 ITREDEHGLALGRLASIVEQVAECHLE-GRECIMVTSG 76 (131)
Q Consensus 40 Lt~~~~~~l~~~~l~~l~~qIa~L~~~-G~eVILVSSG 76 (131)
|-|+...++|...-..+.+.|.+++++ |.-+|+||-=
T Consensus 164 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd 201 (372)
T 1v43_A 164 LMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHD 201 (372)
T ss_dssp EEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 456656789998888999999999765 8899999875
Done!