Query psy11677
Match_columns 462
No_of_seqs 428 out of 3053
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 16:03:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j5v_A Glutamate 5-kinase; pro 99.9 2.9E-27 9.9E-32 243.0 3.1 176 15-223 119-310 (367)
2 2ako_A Glutamate 5-kinase; str 99.9 2.6E-22 8.8E-27 195.1 10.7 110 29-138 137-251 (251)
3 3ll9_A Isopentenyl phosphate k 99.9 6.7E-22 2.3E-26 195.0 10.4 126 13-138 125-266 (269)
4 2j4j_A Uridylate kinase; trans 99.9 1.3E-21 4.6E-26 187.3 11.3 124 14-139 95-225 (226)
5 2rd5_A Acetylglutamate kinase- 99.8 2.8E-20 9.6E-25 185.7 11.8 121 14-139 165-298 (298)
6 2ap9_A NAG kinase, acetylgluta 99.8 6.8E-20 2.3E-24 182.9 12.6 124 12-142 157-293 (299)
7 3nwy_A Uridylate kinase; allos 99.8 5.5E-20 1.9E-24 182.7 10.8 121 8-138 153-280 (281)
8 2egx_A Putative acetylglutamat 99.8 6.7E-20 2.3E-24 180.3 10.6 116 14-138 140-269 (269)
9 2v5h_A Acetylglutamate kinase; 99.8 1.2E-19 4.1E-24 183.3 12.6 123 14-141 177-312 (321)
10 1ybd_A Uridylate kinase; alpha 99.8 9.9E-20 3.4E-24 175.4 10.9 115 15-139 118-239 (239)
11 3ek6_A Uridylate kinase; UMPK 99.8 1.2E-19 4E-24 176.6 11.2 121 9-139 114-241 (243)
12 2brx_A Uridylate kinase; UMP k 99.8 4.8E-20 1.6E-24 179.0 8.5 125 13-139 114-244 (244)
13 2ogx_A Molybdenum storage prot 99.8 1.3E-19 4.4E-24 179.3 11.2 127 9-142 129-274 (276)
14 2va1_A Uridylate kinase; UMPK, 99.8 1.9E-19 6.4E-24 176.1 11.2 116 13-138 132-255 (256)
15 1z9d_A Uridylate kinase, UK, U 99.8 2.8E-19 9.5E-24 174.2 12.1 117 15-141 118-242 (252)
16 2ij9_A Uridylate kinase; struc 99.8 2.5E-19 8.6E-24 170.6 11.5 123 13-138 91-219 (219)
17 2a1f_A Uridylate kinase; PYRH, 99.8 2E-19 7E-24 174.6 11.0 118 15-142 119-243 (247)
18 3ll5_A Gamma-glutamyl kinase r 99.8 7.6E-20 2.6E-24 178.3 7.5 121 13-138 114-249 (249)
19 4a7w_A Uridylate kinase; trans 99.8 4.3E-19 1.5E-23 172.2 10.9 119 9-137 113-239 (240)
20 2ogx_B Molybdenum storage prot 99.8 3.7E-19 1.3E-23 175.3 10.1 106 28-139 163-269 (270)
21 3d40_A FOMA protein; fosfomyci 99.8 7.6E-20 2.6E-24 181.8 4.1 126 13-140 136-283 (286)
22 2we5_A Carbamate kinase 1; arg 99.8 4.3E-19 1.5E-23 178.1 9.1 120 13-138 171-309 (310)
23 2bty_A Acetylglutamate kinase; 99.8 1.5E-18 5E-23 171.6 12.2 119 14-141 150-281 (282)
24 2e9y_A Carbamate kinase; trans 99.8 1.6E-18 5.5E-23 174.5 10.9 100 33-139 215-315 (316)
25 2buf_A Acetylglutamate kinase; 99.8 3.5E-18 1.2E-22 170.7 12.8 120 14-141 166-298 (300)
26 3k4o_A Isopentenyl phosphate k 99.8 1.9E-18 6.4E-23 170.2 10.2 119 13-140 132-265 (266)
27 3kzf_A Carbamate kinase; argin 99.7 4.1E-18 1.4E-22 171.1 9.7 103 31-140 214-317 (317)
28 1e19_A Carbamate kinase-like c 99.7 1E-17 3.4E-22 168.7 11.6 102 31-139 212-314 (314)
29 1gs5_A Acetylglutamate kinase; 99.7 9.7E-18 3.3E-22 163.6 10.7 120 10-138 126-257 (258)
30 3d2m_A Putative acetylglutamat 99.7 3.7E-17 1.3E-21 171.4 12.4 118 14-141 175-305 (456)
31 2jjx_A Uridylate kinase, UMP k 99.7 3.7E-17 1.3E-21 159.6 11.6 118 13-140 122-247 (255)
32 4axs_A Carbamate kinase; oxido 99.7 5.8E-17 2E-21 164.3 10.8 103 30-139 228-332 (332)
33 3zzh_A Acetylglutamate kinase; 99.6 6.1E-16 2.1E-20 155.3 11.7 120 13-142 169-304 (307)
34 3k9d_A LMO1179 protein, aldehy 99.6 8.3E-17 2.9E-21 169.7 5.3 185 166-367 43-279 (464)
35 3s6g_A N-acetylglutamate kinas 99.6 1E-15 3.6E-20 161.3 9.4 122 13-142 179-313 (460)
36 3l86_A Acetylglutamate kinase; 99.6 2.3E-15 7.9E-20 149.3 9.1 105 14-139 162-278 (279)
37 3s6k_A Acetylglutamate kinase; 99.5 2.6E-15 8.8E-20 158.5 6.4 122 13-142 182-316 (467)
38 3c1m_A Probable aspartokinase; 99.5 8.3E-15 2.8E-19 155.0 9.6 115 11-141 172-302 (473)
39 4ab7_A Protein Arg5,6, mitocho 99.5 1.4E-14 4.9E-19 152.6 10.9 198 13-238 169-385 (464)
40 3ab4_A Aspartokinase; aspartat 99.5 2.1E-14 7E-19 149.7 9.8 94 30-140 150-244 (421)
41 3l76_A Aspartokinase; alloster 99.5 2E-14 7E-19 156.1 9.7 96 29-141 150-246 (600)
42 1vlu_A Gamma-glutamyl phosphat 99.5 1.3E-14 4.4E-19 153.3 6.3 199 146-357 12-290 (468)
43 3tvi_A Aspartokinase; structur 99.5 4.1E-14 1.4E-18 148.7 8.6 97 30-142 184-281 (446)
44 2j0w_A Lysine-sensitive aspart 99.5 3.7E-14 1.3E-18 149.2 8.1 93 30-141 197-293 (449)
45 2cdq_A Aspartokinase; aspartat 99.5 4.4E-14 1.5E-18 150.8 8.8 96 30-141 229-325 (510)
46 3ros_A NAD-dependent aldehyde 99.4 7.8E-14 2.7E-18 147.9 4.0 188 149-347 28-276 (484)
47 1o20_A Gamma-glutamyl phosphat 99.4 3.6E-13 1.2E-17 140.6 7.9 191 146-348 12-279 (427)
48 2h5g_A Delta 1-pyrroline-5-car 99.4 5E-13 1.7E-17 141.0 7.3 190 148-348 30-292 (463)
49 3k2w_A Betaine-aldehyde dehydr 99.4 1.9E-13 6.4E-18 145.4 4.0 189 149-348 52-303 (497)
50 4ghk_A Gamma-glutamyl phosphat 99.4 4.4E-13 1.5E-17 140.6 6.4 188 149-348 28-291 (444)
51 3my7_A Alcohol dehydrogenase/a 99.3 3.2E-12 1.1E-16 134.3 12.1 141 209-363 100-270 (452)
52 3rh9_A Succinate-semialdehyde 99.3 2.9E-13 1E-17 144.3 3.6 175 163-348 77-302 (506)
53 4e4g_A Methylmalonate-semialde 99.3 2.7E-13 9.2E-18 145.1 2.4 175 149-330 66-302 (521)
54 3r31_A BADH, betaine aldehyde 99.3 2.6E-13 9E-18 145.0 2.1 189 149-348 54-304 (517)
55 3lns_A Benzaldehyde dehydrogen 99.3 9.8E-13 3.3E-17 138.4 5.8 176 149-330 30-268 (457)
56 2ve5_A BADH, betaine aldehyde 99.3 7.2E-13 2.5E-17 140.5 4.4 174 149-330 46-284 (490)
57 3prl_A NADP-dependent glyceral 99.3 8.3E-13 2.8E-17 140.8 4.8 176 149-330 51-291 (505)
58 2w8n_A Succinate-semialdehyde 99.3 1E-12 3.4E-17 139.4 3.1 180 149-330 50-290 (487)
59 3ju8_A Succinylglutamic semial 99.3 5.3E-12 1.8E-16 134.0 8.0 177 149-330 44-280 (490)
60 1wnd_A Putative betaine aldehy 99.3 2.6E-12 9E-17 136.6 5.7 190 149-348 62-313 (495)
61 1uzb_A 1-pyrroline-5-carboxyla 99.3 1.2E-12 4.1E-17 139.8 2.6 176 149-330 76-320 (516)
62 2d4e_A 5-carboxymethyl-2-hydro 99.2 1.5E-12 5.1E-17 139.0 2.8 176 149-330 66-303 (515)
63 3ty7_A Putative aldehyde dehyd 99.2 8.9E-13 3E-17 139.4 0.9 190 149-348 47-294 (478)
64 3v4c_A Aldehyde dehydrogenase 99.2 1.8E-12 6E-17 138.8 2.8 176 149-330 65-321 (528)
65 3jz4_A Succinate-semialdehyde 99.2 7.8E-12 2.7E-16 132.3 6.9 175 149-330 49-286 (481)
66 3etf_A Putative succinate-semi 99.2 6E-12 2E-16 132.5 5.1 174 149-330 31-266 (462)
67 2imp_A Lactaldehyde dehydrogen 99.2 6E-12 2E-16 133.1 5.0 177 149-330 46-283 (479)
68 3r64_A NAD dependent benzaldeh 99.2 5.1E-12 1.7E-16 134.7 4.3 188 149-346 52-304 (508)
69 1bxs_A Aldehyde dehydrogenase; 99.2 5.9E-12 2E-16 134.0 4.0 159 166-330 92-301 (501)
70 1a4s_A ALDH, betaine aldehyde 99.2 6.2E-12 2.1E-16 133.9 3.8 176 149-330 60-295 (503)
71 1ez0_A ALDH, aldehyde dehydrog 99.2 5.1E-12 1.7E-16 134.7 3.1 191 149-347 32-300 (510)
72 1o04_A Aldehyde dehydrogenase, 99.2 3.2E-12 1.1E-16 136.1 1.5 159 166-330 91-300 (500)
73 3pqa_A Lactaldehyde dehydrogen 99.2 3.1E-12 1.1E-16 135.7 1.4 176 149-330 36-273 (486)
74 1t90_A MMSDH, probable methylm 99.2 1.4E-11 4.7E-16 130.6 6.3 176 149-330 45-281 (486)
75 1euh_A NADP dependent non phos 99.2 2.2E-11 7.6E-16 128.6 7.5 180 149-330 42-282 (475)
76 3b4w_A Aldehyde dehydrogenase; 99.2 6.4E-12 2.2E-16 133.6 3.0 159 166-330 79-286 (495)
77 1uxt_A Glyceraldehyde-3-phosph 99.1 1.6E-11 5.4E-16 130.7 4.7 177 149-330 56-295 (501)
78 4dng_A Uncharacterized aldehyd 99.1 1.8E-11 6.1E-16 129.6 4.3 177 149-330 46-285 (485)
79 3ek1_A Aldehyde dehydrogenase; 99.1 1.4E-11 4.7E-16 131.3 3.4 177 149-330 72-309 (504)
80 3u4j_A NAD-dependent aldehyde 99.1 1E-11 3.5E-16 133.1 1.8 159 166-330 94-302 (528)
81 3sza_A Aldehyde dehydrogenase, 99.1 6.7E-11 2.3E-15 124.9 5.9 172 166-348 49-272 (469)
82 3ifg_A Succinate-semialdehyde 99.1 4.1E-11 1.4E-15 127.1 3.5 176 149-330 52-289 (484)
83 3qan_A 1-pyrroline-5-carboxyla 99.0 3.4E-11 1.2E-15 129.3 0.9 177 149-330 76-319 (538)
84 3haz_A Proline dehydrogenase; 99.0 6.9E-11 2.4E-15 134.8 1.7 159 166-330 581-792 (1001)
85 2j6l_A Aldehyde dehydrogenase 99.0 1.5E-10 5.1E-15 123.1 4.2 119 210-330 155-301 (500)
86 4f9i_A Proline dehydrogenase/d 99.0 8.6E-11 2.9E-15 134.3 1.8 190 149-348 570-827 (1026)
87 3iwj_A Putative aminoaldehyde 99.0 2.2E-10 7.5E-15 122.0 3.7 161 165-330 80-292 (503)
88 4f3x_A Putative aldehyde dehyd 98.9 8.2E-10 2.8E-14 117.5 6.9 176 149-330 64-301 (498)
89 2wme_A BADH, betaine aldehyde 98.9 2.3E-10 7.9E-15 121.5 1.4 191 149-348 46-298 (490)
90 3i44_A Aldehyde dehydrogenase; 98.9 5.7E-10 1.9E-14 118.7 3.0 175 149-330 65-301 (497)
91 3ed6_A Betaine aldehyde dehydr 98.8 2.7E-10 9.1E-15 121.9 -0.8 160 166-330 103-311 (520)
92 2y53_A Aldehyde dehydrogenase 98.8 1.2E-09 4E-14 117.1 4.1 175 148-330 44-297 (534)
93 2o2p_A Formyltetrahydrofolate 98.8 1.1E-09 3.7E-14 117.1 2.6 163 166-330 107-320 (517)
94 4e3x_A Delta-1-pyrroline-5-car 98.7 4.8E-08 1.6E-12 105.4 10.1 177 149-330 102-346 (563)
95 4h7n_A Aldehyde dehydrogenase; 98.6 4.8E-08 1.6E-12 103.1 8.1 174 149-330 30-264 (474)
96 1vlu_A Gamma-glutamyl phosphat 97.8 0.00012 3.9E-09 77.3 11.6 91 365-456 18-109 (468)
97 1o20_A Gamma-glutamyl phosphat 97.8 0.00016 5.3E-09 75.3 12.2 90 366-456 19-108 (427)
98 4ghk_A Gamma-glutamyl phosphat 97.5 0.0002 6.7E-09 74.9 9.1 93 364-457 29-121 (444)
99 2h5g_A Delta 1-pyrroline-5-car 97.4 0.00084 2.9E-08 70.6 11.6 89 366-456 34-123 (463)
100 3lns_A Benzaldehyde dehydrogen 93.7 0.072 2.4E-06 55.6 5.9 78 365-446 32-109 (457)
101 3v4c_A Aldehyde dehydrogenase 92.8 0.12 4.3E-06 54.8 6.2 79 365-448 67-145 (528)
102 3sza_A Aldehyde dehydrogenase, 92.0 0.19 6.5E-06 52.7 6.3 78 365-446 22-99 (469)
103 1ez0_A ALDH, aldehyde dehydrog 92.0 0.14 4.8E-06 54.2 5.3 77 366-447 35-111 (510)
104 3ros_A NAD-dependent aldehyde 91.6 0.16 5.6E-06 53.4 5.2 77 366-447 31-107 (484)
105 2imp_A Lactaldehyde dehydrogen 91.4 1.1 3.6E-05 47.0 11.2 78 366-455 49-126 (479)
106 4dng_A Uncharacterized aldehyd 91.2 0.28 9.6E-06 51.4 6.5 75 366-453 49-123 (485)
107 2y53_A Aldehyde dehydrogenase 91.1 0.19 6.4E-06 53.5 5.2 78 366-448 48-126 (534)
108 3k9d_A LMO1179 protein, aldehy 90.4 0.41 1.4E-05 49.9 6.9 49 364-412 15-63 (464)
109 3r64_A NAD dependent benzaldeh 90.4 0.46 1.6E-05 50.2 7.3 76 366-454 55-130 (508)
110 2w8n_A Succinate-semialdehyde 89.9 0.48 1.6E-05 49.8 6.9 71 366-448 53-123 (487)
111 2ve5_A BADH, betaine aldehyde 89.9 0.47 1.6E-05 49.8 6.9 47 366-412 49-95 (490)
112 3ty7_A Putative aldehyde dehyd 89.4 0.55 1.9E-05 49.1 7.0 47 366-412 50-96 (478)
113 3r31_A BADH, betaine aldehyde 89.4 0.54 1.8E-05 49.9 6.9 69 366-448 57-125 (517)
114 3k2w_A Betaine-aldehyde dehydr 89.2 0.57 1.9E-05 49.4 6.9 47 366-412 55-101 (497)
115 1wnd_A Putative betaine aldehy 89.1 0.59 2E-05 49.3 6.9 46 366-411 65-110 (495)
116 3ju8_A Succinylglutamic semial 88.8 0.63 2.2E-05 48.9 6.9 48 365-412 46-93 (490)
117 1bxs_A Aldehyde dehydrogenase; 88.7 0.25 8.6E-06 52.2 3.8 75 366-444 63-140 (501)
118 3u4j_A NAD-dependent aldehyde 88.7 0.16 5.5E-06 54.1 2.3 75 366-445 66-142 (528)
119 3prl_A NADP-dependent glyceral 88.6 0.67 2.3E-05 49.0 6.9 48 366-413 54-101 (505)
120 1uzb_A 1-pyrroline-5-carboxyla 88.5 0.67 2.3E-05 49.0 6.9 75 366-445 79-153 (516)
121 1o04_A Aldehyde dehydrogenase, 88.3 0.29 1E-05 51.7 3.9 74 366-443 62-138 (500)
122 3jz4_A Succinate-semialdehyde 88.1 0.74 2.5E-05 48.2 6.9 77 366-454 52-128 (481)
123 1euh_A NADP dependent non phos 88.1 0.74 2.5E-05 48.1 6.9 78 366-455 45-122 (475)
124 3etf_A Putative succinate-semi 88.1 0.77 2.6E-05 47.7 6.9 46 366-411 34-79 (462)
125 1t90_A MMSDH, probable methylm 88.1 0.75 2.6E-05 48.3 6.9 71 366-448 48-118 (486)
126 4e4g_A Methylmalonate-semialde 88.0 0.72 2.5E-05 49.0 6.7 71 366-448 69-139 (521)
127 2d4e_A 5-carboxymethyl-2-hydro 87.7 0.8 2.7E-05 48.5 6.9 71 366-448 69-139 (515)
128 1a4s_A ALDH, betaine aldehyde 87.5 0.86 2.9E-05 48.1 6.9 71 366-448 63-133 (503)
129 1uxt_A Glyceraldehyde-3-phosph 86.8 0.86 2.9E-05 48.1 6.4 71 366-448 59-130 (501)
130 3ifg_A Succinate-semialdehyde 86.7 1 3.5E-05 47.3 7.0 71 366-448 55-125 (484)
131 3b4w_A Aldehyde dehydrogenase; 86.6 0.79 2.7E-05 48.3 6.0 46 366-411 51-98 (495)
132 3rh9_A Succinate-semialdehyde 86.5 0.47 1.6E-05 50.2 4.3 47 366-412 54-100 (506)
133 4e3x_A Delta-1-pyrroline-5-car 86.2 1.2 4.1E-05 47.8 7.3 77 366-446 105-182 (563)
134 3ek1_A Aldehyde dehydrogenase; 86.0 1.1 3.9E-05 47.3 6.9 71 366-448 75-145 (504)
135 3i44_A Aldehyde dehydrogenase; 85.8 1.2 4.1E-05 46.9 6.9 46 366-411 68-113 (497)
136 3ed6_A Betaine aldehyde dehydr 85.6 1.3 4.4E-05 47.0 7.1 74 367-453 76-151 (520)
137 2wme_A BADH, betaine aldehyde 85.3 1.3 4.4E-05 46.7 6.9 45 367-411 50-94 (490)
138 4f3x_A Putative aldehyde dehyd 85.0 1.4 4.9E-05 46.4 7.0 46 366-411 67-112 (498)
139 3qan_A 1-pyrroline-5-carboxyla 84.1 1.5 5.1E-05 46.7 6.8 46 366-411 79-124 (538)
140 3pqa_A Lactaldehyde dehydrogen 84.0 1.4 4.9E-05 46.2 6.5 47 366-412 39-85 (486)
141 4h7n_A Aldehyde dehydrogenase; 83.8 1.3 4.5E-05 46.2 6.1 46 366-411 33-78 (474)
142 2o2p_A Formyltetrahydrofolate 82.8 1.7 5.9E-05 46.0 6.6 72 366-448 79-152 (517)
143 3iwj_A Putative aminoaldehyde 82.2 1.7 5.7E-05 45.8 6.2 46 366-411 50-100 (503)
144 3my7_A Alcohol dehydrogenase/a 80.6 2.7 9.2E-05 43.5 7.0 46 365-410 11-56 (452)
145 2j6l_A Aldehyde dehydrogenase 80.5 2.5 8.6E-05 44.4 6.8 45 366-410 64-108 (500)
146 3haz_A Proline dehydrogenase; 74.8 3.6 0.00012 47.2 6.3 72 364-447 553-624 (1001)
147 4f9i_A Proline dehydrogenase/d 73.6 4.6 0.00016 46.4 6.8 48 364-411 571-618 (1026)
148 2p9j_A Hypothetical protein AQ 38.9 40 0.0014 28.3 5.2 34 105-138 47-80 (162)
149 2hqh_E Restin; beta/BETA struc 38.4 6.5 0.00022 24.9 -0.0 11 1-11 11-21 (26)
150 3ewi_A N-acylneuraminate cytid 36.0 58 0.002 28.6 5.9 57 51-129 11-69 (168)
151 1k1e_A Deoxy-D-mannose-octulos 35.8 37 0.0013 29.5 4.6 67 51-137 10-78 (180)
152 3grf_A Ornithine carbamoyltran 28.3 32 0.0011 34.3 3.1 46 258-304 87-134 (328)
153 1rlm_A Phosphatase; HAD family 26.7 61 0.0021 29.9 4.6 28 102-129 29-56 (271)
154 1zq6_A Otcase, ornithine carba 22.8 42 0.0015 33.9 2.8 35 267-302 122-167 (359)
155 2pzo_E CAP-Gly domain-containi 21.6 19 0.00065 25.2 -0.0 11 1-11 28-38 (42)
156 2ioj_A Hypothetical protein AF 21.5 1.4E+02 0.0046 25.2 5.4 49 250-300 53-106 (139)
157 1pvv_A Otcase, ornithine carba 21.1 54 0.0018 32.5 3.1 46 258-304 88-135 (315)
158 3e2u_E CAP-Gly domain-containi 20.6 21 0.0007 25.1 -0.0 11 1-11 28-38 (42)
159 1nf2_A Phosphatase; structural 20.3 1.5E+02 0.005 27.3 5.8 23 107-129 31-53 (268)
No 1
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=99.93 E-value=2.9e-27 Score=243.03 Aligned_cols=176 Identities=24% Similarity=0.308 Sum_probs=110.0
Q ss_pred HhHHHHHHHHh-----------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccH--HhH
Q psy11677 15 TNFNELFRSIF-----------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTS--EMR 80 (462)
Q Consensus 15 ~~~~e~~~~~~-----------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~--~e~ 80 (462)
+.++.+++.+. ++|++|+|||++|+++|.+++||+|+|+|||||||++||+ +|++++|++++. .|+
T Consensus 119 ~~i~~LL~~g~IPIv~end~v~~~el~~gd~D~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~i~~~~~e~ 198 (367)
T 2j5v_A 119 DTLRALLDNNVVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDAL 198 (367)
T ss_dssp HHHHHHHHTTCEEEEEECTTSCCGGGCCCSHHHHHHHHHHHHTCSEEEEEECC---------------------------
T ss_pred HHHHHHHHCCCEEEECCCCceecccccCCCHHHHHHHHHHhcCCCEEEEeecCCceECCCCCCCCCCeEeeeeCCCHHHH
Confidence 45556666541 2557899999999999999999999999999999999998 899999999999 788
Q ss_pred HhhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCccccccccCCCCCCCCcHHHHHHHHHHHH
Q psy11677 81 DTVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTDASAQSGGTPVEVLAENVNLKM 160 (462)
Q Consensus 81 ~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~~~~~~~~~~~~ia~~AK~As 160 (462)
.++++++++.+++|||.+|+++|..|+++|++++|+||+.|+.|.++|+|+..||+|.+...+ ..+|+
T Consensus 199 ~~l~~~~~s~~gtGgM~~Kl~Aa~~a~~~Gv~v~I~~g~~~~~L~~~l~g~~~GT~i~~~~~~----------~~~rk-- 266 (367)
T 2j5v_A 199 RAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATP----------LENRK-- 266 (367)
T ss_dssp ---------------CHHHHHHHHHHHHTTCEEEEEETTSTTHHHHHHHTCCCSEEECCCSSC----------CCGGG--
T ss_pred HHHhhccCCCcCcCccHHHHHHHHHHHHcCCCEEEEcCCCchHHHHHhcCCCCcEEEEcCccc----------cchhh--
Confidence 888766667899999999999999999999999999999999999999999999999987653 22343
Q ss_pred HHHHHHHHHHHhCCchhhcCchhcHHHHHHHHhhccccccccccCCCCCCCCceeeEEE--EeCC
Q psy11677 161 EILVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTDASAQSGGTPVEVLAEI--WKNE 223 (462)
Q Consensus 161 ~~L~~iA~aL~~~~~~IL~AN~~D~~~~~~~~~~~~i~t~~a~~~d~~~~~PlGVi~~I--yEsr 223 (462)
.|+ ..+..+|..++++++ .+.+.+. ..--.|.||+.+- |+..
T Consensus 267 ---~w~-~~~~~~G~v~vD~gA-----~~al~~~------------g~sLl~~Gi~~v~g~F~~g 310 (367)
T 2j5v_A 267 ---RWI-FGAPPAGEITVDEGA-----TAAILER------------GSSLLPKGIKSVTGNFSRG 310 (367)
T ss_dssp ---GGG-GTCCCSCEEEECHHH-----HHHHHHH------------CCCBCGGGEEEEESCCCTT
T ss_pred ---eee-eccCCCCEEEECcCH-----HHHHHhC------------CCccCCcccEEEECcccCC
Confidence 677 777788888888887 3566532 1235677887776 6555
No 2
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=99.87 E-value=2.6e-22 Score=195.13 Aligned_cols=110 Identities=30% Similarity=0.427 Sum_probs=96.3
Q ss_pred ccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHH--hHHhhhhcCCCCCCCCcchHHHHHHHH
Q psy11677 29 ISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSE--MRDTVQFGQKSKVGTGGMDSKVNSATW 105 (462)
Q Consensus 29 i~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~--e~~~l~~~~~s~~gtGGM~~Kl~AA~~ 105 (462)
+.++|+|++|+.+|..++||+|+++|||||||++||+ +|++++|+++++. |+.+++.++++.+++|||.+|+++|..
T Consensus 137 ~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGVy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~~~~~~~ggm~~k~~aa~~ 216 (251)
T 2ako_A 137 IVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKF 216 (251)
T ss_dssp HHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC---------CBSCHHHHHHHHHHH
T ss_pred eeecCchHHHHHHHHhcCCCEEEEEeCCCceeeCCCCCCCCCeEeeEeccchHHHHHHhcccCCCCccCchHHHHHHHHH
Confidence 3588999999999999999999999999999999998 7999999999998 887776544567999999999999999
Q ss_pred HHHcCCeEEEEeCCChhHHHH--HHcCCccccccc
Q psy11677 106 ALDRGVSVVICNGMQKEAIKQ--IVAGRKIGTFFT 138 (462)
Q Consensus 106 a~~~Gv~v~I~sG~~~~~L~~--~l~g~~~GT~I~ 138 (462)
|+++|++++|+||+.|+.|.+ +|+|++.||+|.
T Consensus 217 a~~~gv~v~I~~g~~~~~l~~~~~~~g~~~GT~i~ 251 (251)
T 2ako_A 217 LLEHNKKMFLASGFDLSVAKTFLLEDKQIGGTLFE 251 (251)
T ss_dssp HHHTTCEEEEEESSSCHHHHHHHHSCCCCSSEEEC
T ss_pred HHHCCCeEEEEeCCChhhhhhhHHhcCCCCceEeC
Confidence 999999999999999999999 999999999984
No 3
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.86 E-value=6.7e-22 Score=194.98 Aligned_cols=126 Identities=22% Similarity=0.281 Sum_probs=97.7
Q ss_pred HHHhHHHHHHHHh------------c--CCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccH
Q psy11677 13 FLTNFNELFRSIF------------Q--KLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTS 77 (462)
Q Consensus 13 ~~~~~~e~~~~~~------------~--~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~ 77 (462)
.++.++.+++.+. . .+++++|+|++|+.+|..++||+|+++|||||||++||+ +|++++|+++++
T Consensus 125 ~~~~i~~lL~~g~ipVi~~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdv~Gv~~~dp~~~~~a~~i~~i~~ 204 (269)
T 3ll9_A 125 DISLIRSYLEEGMVPVVYGDVVLDSDRRLKFSVISGDQLINHFSLRLMPERVILGTDVDGVYTRNPKKHPDARLLDVIGS 204 (269)
T ss_dssp CCHHHHHHHHTTCEEEEECEEEEBSCTTTSEEEECHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCSBCCC
T ss_pred cHHHHHHHHHCCCEEEECCCEEecccccCcceecchHHHHHHHHHHcCCCeEEEecCCCEEEcCCCCcCCcceEccccCH
Confidence 3566788888762 2 347889999999999999999999999999999999998 899999999999
Q ss_pred HhHHhhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCcc-ccccc
Q psy11677 78 EMRDTVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKI-GTFFT 138 (462)
Q Consensus 78 ~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~-GT~I~ 138 (462)
.|..+++.++++.+++|||.+|+++|..++++|++++|+||+.|+.|.++|+|+++ ||+|.
T Consensus 205 ~e~~~~l~~~~~~~~tgGM~~Kl~aa~~a~~~Gv~v~I~~g~~~~~l~~~~~g~~~~GT~i~ 266 (269)
T 3ll9_A 205 LDDLESLDGTLNTDVTGGMVGKIRELLLLAEKGVESEIINAAVPGNIERALLGEEVRGTRIT 266 (269)
T ss_dssp -------------------SHHHHHHHHHHHTTCCEEEEESSSTTHHHHHHHTCCCSSEEC-
T ss_pred HHHHHHhcccCCCcCcCCcHHHHHHHHHHHhCCCeEEEEeCCCchHHHHHHCCCCCCcEEEE
Confidence 99877765444678999999999999999999999999999999999999999999 99997
No 4
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=99.85 E-value=1.3e-21 Score=187.29 Aligned_cols=124 Identities=18% Similarity=0.227 Sum_probs=103.7
Q ss_pred HHhHHHHHHHHh----cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHHhhhhcCC
Q psy11677 14 LTNFNELFRSIF----QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFGQK 88 (462)
Q Consensus 14 ~~~~~e~~~~~~----~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~~~ 88 (462)
+++++++++.+. .++.+++|+|++|+.+|..++||+|+++|||||||++||+ +|++++|+++++.|+.++...
T Consensus 95 ~~~i~~ll~~g~ipVi~gg~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~l~~~-- 172 (226)
T 2j4j_A 95 LEEFIQDWSHGKVVVTGGFQPGQSTAAVAALVAEASSSKTLVVATNVDGVYEKDPRIYADVKLIPHLTTQDLRKILEG-- 172 (226)
T ss_dssp HHHHHHHHTTSSBEEECCCSTTSCHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHHHC---
T ss_pred HHHHHHHHHCCCEEEEcCCCCCCCcHHHHHHHHHhcCCCEEEEeeccceeeCCCCCCCCCCeEccccCHHHHHHHhhc--
Confidence 455666666652 3367899999999999999999999999999999999998 899999999999999887522
Q ss_pred CCCCCCcc--hHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCcccccccc
Q psy11677 89 SKVGTGGM--DSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTD 139 (462)
Q Consensus 89 s~~gtGGM--~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~ 139 (462)
+..++||| .+|++++..|.++|++++|+||+.|+.+.++|+|++.||+|.+
T Consensus 173 ~~~~~ggm~~~~k~~a~~~a~~~gi~v~I~~~~~~~~l~~~~~g~~~GT~i~~ 225 (226)
T 2j4j_A 173 SQSVQAGTYELLDPLAIKIVERSKIRVIVMNYRKLNRIIDILKGEEVSSIIEP 225 (226)
T ss_dssp ---------CCSCHHHHHHHHHTTCEEEEEEGGGGGGHHHHHTTCSSCEEEEC
T ss_pred CCCCcCCccccchHHHHHHHHHCCCeEEEEeCCChhHHHHHHcCCCCceEEee
Confidence 25778999 9999999999999999999999999999999999999999975
No 5
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=99.82 E-value=2.8e-20 Score=185.66 Aligned_cols=121 Identities=24% Similarity=0.316 Sum_probs=105.2
Q ss_pred HHhHHHHHHHHh----------cCCcccc-ChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhHHh
Q psy11677 14 LTNFNELFRSIF----------QKLISIK-DNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMRDT 82 (462)
Q Consensus 14 ~~~~~e~~~~~~----------~~ei~~g-dnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~~~ 82 (462)
++.++++++.+. ..+-.|+ |+|++|+.+|..++||+|+|+|||||||++||+ | +++|+++++.|+.+
T Consensus 165 ~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~~dp~-~-a~~i~~is~~e~~~ 242 (298)
T 2rd5_A 165 PSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKED-P-SSLIKEIDIKGVKK 242 (298)
T ss_dssp GGGHHHHHHTTCEEEEESEEECTTSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSEESSSSC-T-TSEECEEEHHHHHH
T ss_pred HHHHHHHHhCCCEEEEcCeeECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcCeecCCCC-C-CCCcccCCHHHHHH
Confidence 566778888772 1122344 999999999999999999999999999999997 4 89999999999988
Q ss_pred hhhcCCCCCCCCcchHHHHHHHHHHHcCCe-EEEEeCCChhHH-HHHHcCCcccccccc
Q psy11677 83 VQFGQKSKVGTGGMDSKVNSATWALDRGVS-VVICNGMQKEAI-KQIVAGRKIGTFFTD 139 (462)
Q Consensus 83 l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~-v~I~sG~~~~~L-~~~l~g~~~GT~I~~ 139 (462)
+.. ...++|||.+|+++|..++++|++ ++|+||+.|+.| .++|+|++.||+|.+
T Consensus 243 ~~~---~g~~~gGM~~Kl~aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~i~~ 298 (298)
T 2rd5_A 243 MIE---DGKVAGGMIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMITG 298 (298)
T ss_dssp HHH---TTSSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHSSSCSEEEEEC
T ss_pred HHH---CCCCCCchHHHHHHHHHHHHcCCCeEEEecCCCCchHHHHHhcCCCCceEEeC
Confidence 763 347899999999999999999995 999999999997 899999999999964
No 6
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=99.81 E-value=6.8e-20 Score=182.88 Aligned_cols=124 Identities=19% Similarity=0.224 Sum_probs=106.9
Q ss_pred hHHHhHHHHHHHHh----------cCCcccc-ChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhH
Q psy11677 12 HFLTNFNELFRSIF----------QKLISIK-DNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMR 80 (462)
Q Consensus 12 ~~~~~~~e~~~~~~----------~~ei~~g-dnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~ 80 (462)
..++.++++++.+. ..+-.+. |+|++|+.+|..++||+|+|+|||||||++||+ ++++|+++++.|+
T Consensus 157 v~~~~i~~lL~~g~IpVv~~v~~~~~G~~~~l~~D~~Aa~lA~~l~Ad~liilTDVdGV~~~dP~--~~~~i~~is~~e~ 234 (299)
T 2ap9_A 157 VNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPD--RDSLVSEIDTGTL 234 (299)
T ss_dssp ECHHHHHHHHHTTCEEEEESEEECTTCCEEEECHHHHHHHHHHHTTCSEEEEEESSSSEETTTTC--TTCEESEEEHHHH
T ss_pred ecHHHHHHHHhCCCeEEECCeeECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCChhhhcCCCC--CCcChhhcCHHHH
Confidence 34566777777762 1122344 999999999999999999999999999999997 4799999999999
Q ss_pred HhhhhcCCCCCCCCcchHHHHHHHHHHHcCCe-EEEEeCCChhHH-HHHHcCCccccccccCCC
Q psy11677 81 DTVQFGQKSKVGTGGMDSKVNSATWALDRGVS-VVICNGMQKEAI-KQIVAGRKIGTFFTDASA 142 (462)
Q Consensus 81 ~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~-v~I~sG~~~~~L-~~~l~g~~~GT~I~~~~~ 142 (462)
.+++. +++|||.+|+++|..++++|++ ++|+||+.|+.| .++|+|+++||+|.+++.
T Consensus 235 ~~l~~-----~~~ggM~~Kl~aa~~a~~~gv~~v~I~~g~~p~~ll~~l~~~~~~GT~i~~~~~ 293 (299)
T 2ap9_A 235 AQLLP-----TLELGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRGEG 293 (299)
T ss_dssp HHHGG-----GSCTTTHHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEECCCS
T ss_pred HHHHH-----hhcCchHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCcEEEecCCC
Confidence 88852 7899999999999999999996 999999999985 999999999999997653
No 7
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=99.81 E-value=5.5e-20 Score=182.67 Aligned_cols=121 Identities=21% Similarity=0.278 Sum_probs=101.9
Q ss_pred hhhhhHHHhHHHHHHHHh------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhH
Q psy11677 8 LCEQHFLTNFNELFRSIF------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMR 80 (462)
Q Consensus 8 ~~~~~~~~~~~e~~~~~~------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~ 80 (462)
.++++.+.+..++++.+. ..+++|+|||++|+++|..++||+|+++|||||||++||+ +|++++|+++++.|.
T Consensus 153 ~~~~~~~~~~l~lL~~g~IpVv~g~~g~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~A~~i~~is~~e~ 232 (281)
T 3nwy_A 153 VAEPYLPLRAVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREV 232 (281)
T ss_dssp GSEECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-----CCCCBCSEECHHHH
T ss_pred cccccchHHHHHHHHcCCeEEEECCCCCCCCCHHHHHHHHHHHcCCCEEEEeeccCccccCCCCcCCCCeEcccccHHHH
Confidence 345555555557777762 3468999999999999999999999999999999999998 899999999999876
Q ss_pred HhhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCccccccc
Q psy11677 81 DTVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFT 138 (462)
Q Consensus 81 ~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~ 138 (462)
.+ .|+|..|+.++..|.++|++++|+||+.|+.|.++|+|+++||+|.
T Consensus 233 ~~----------~g~~v~k~~Aa~~a~~~Gi~v~I~~g~~p~~l~~~l~Ge~~GT~i~ 280 (281)
T 3nwy_A 233 LD----------RGLRVADATAFSLCMDNGMPILVFNLLTDGNIARAVRGEKIGTLVT 280 (281)
T ss_dssp HT----------TTCCSSCHHHHHHHHTTTCCEEEEETTSTTHHHHHHHTCCCSEEEC
T ss_pred HH----------cCCCcHHHHHHHHHHHCCCeEEEecCCCchHHHHHHcCCCCceEEe
Confidence 43 2567789999999999999999999999999999999999999986
No 8
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=99.80 E-value=6.7e-20 Score=180.31 Aligned_cols=116 Identities=25% Similarity=0.357 Sum_probs=98.4
Q ss_pred HHhHHHHHHHHh-----------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhHH-
Q psy11677 14 LTNFNELFRSIF-----------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMRD- 81 (462)
Q Consensus 14 ~~~~~e~~~~~~-----------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~~- 81 (462)
++.++++++.+. ..++.++|+|++|+.+|..++||+|+++|||||||+ || +|++++|+++++.|+.
T Consensus 140 ~~~i~~ll~~g~ipVi~~v~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~-dp-~~~a~~i~~i~~~e~~~ 217 (269)
T 2egx_A 140 KALLDLLLQAGYLPVLTPPALSYENEAINTDGDQIAALLATLYGAEALVYLSNVPGLLA-RY-PDEASLVREIPVERIED 217 (269)
T ss_dssp HHHHHHHHHTTCEEEEECCEEETTSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSCBC--------CBCCEECHHHHHC
T ss_pred HHHHHHHHHCCCEEEEcCcEECCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCchhhhc-CC-CCCccccccCCHHHhhH
Confidence 566777777762 225678999999999999999999999999999999 89 6899999999999988
Q ss_pred -hhhhcCCCCCCCCcchHHHHHHHHHHHcCC-eEEEEeCCChhHHHHHHcCCccccccc
Q psy11677 82 -TVQFGQKSKVGTGGMDSKVNSATWALDRGV-SVVICNGMQKEAIKQIVAGRKIGTFFT 138 (462)
Q Consensus 82 -~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv-~v~I~sG~~~~~L~~~l~g~~~GT~I~ 138 (462)
++ +.+++|||.+|+++|..|+++|+ +++|+||+.|+.|.+++.| .||+|.
T Consensus 218 ~~l-----~~~~~ggm~~Kl~aa~~a~~~gv~~v~I~~g~~~~~l~~~l~g--~GT~i~ 269 (269)
T 2egx_A 218 PEY-----LALAQGRMKRKVMGAVEAVKGGVKRVVFADGRVENPIRRALSG--EGTVVR 269 (269)
T ss_dssp HHH-----HTTSCHHHHHHHHHHHHHHHTTCSCEEEEESSSSSHHHHHHTT--CSEEEC
T ss_pred HHh-----cCCCCCchHHHHHHHHHHHHcCCCeEEEEeCCCchHHHHHhCC--CCeEEC
Confidence 77 35789999999999999999999 9999999999999999987 799984
No 9
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=99.80 E-value=1.2e-19 Score=183.27 Aligned_cols=123 Identities=24% Similarity=0.318 Sum_probs=106.7
Q ss_pred HHhHHHHHHHHhc--------CCc--ccc-ChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhHHh
Q psy11677 14 LTNFNELFRSIFQ--------KLI--SIK-DNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMRDT 82 (462)
Q Consensus 14 ~~~~~e~~~~~~~--------~ei--~~g-dnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~~~ 82 (462)
++.++++++.+.. ++. .|+ |+|++|+.+|..++||+|+|+|||||||++||+ ++++|+++++.|+.+
T Consensus 177 ~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dp~--~a~~i~~is~~e~~~ 254 (321)
T 2v5h_A 177 SEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKR--PESLIPRLNIPQSRE 254 (321)
T ss_dssp GGGTHHHHHTTCEEEEESEEECTTSCEEECCHHHHHHHHHHHTTCSEEEEEESSSSCBSSTTC--TTCBCCEEEHHHHHH
T ss_pred HHHHHHHHHCCCeEEEeCceECCCCCEEEeCHHHHHHHHHHHcCCCEEEEeeCCCceEcCCCC--CCeeeeEEcHHHHHH
Confidence 5667788887731 222 566 999999999999999999999999999999997 589999999999988
Q ss_pred hhhcCCCCCCCCcchHHHHHHHHHHHcCCe-EEEEeCCChhHH-HHHHcCCccccccccCC
Q psy11677 83 VQFGQKSKVGTGGMDSKVNSATWALDRGVS-VVICNGMQKEAI-KQIVAGRKIGTFFTDAS 141 (462)
Q Consensus 83 l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~-v~I~sG~~~~~L-~~~l~g~~~GT~I~~~~ 141 (462)
++. ...++|||.+|+++|..|+++|++ ++|+||+.|+.| .++|+|++.||+|.+++
T Consensus 255 l~~---~g~~~gGM~~Kl~Aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~~~~ 312 (321)
T 2v5h_A 255 LIA---QGIVGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSG 312 (321)
T ss_dssp HHH---TTSSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCCCCSEEEEECC-
T ss_pred HHh---CCCCcCcHHHHHHHHHHHHHcCCCEEEEEeCCCCchHHHHHhcCCCCceEEECCc
Confidence 763 347899999999999999999996 999999999986 89999999999998764
No 10
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=99.80 E-value=9.9e-20 Score=175.36 Aligned_cols=115 Identities=18% Similarity=0.229 Sum_probs=100.9
Q ss_pred HhHHHHHHHHh------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHHhhhhcC
Q psy11677 15 TNFNELFRSIF------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFGQ 87 (462)
Q Consensus 15 ~~~~e~~~~~~------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~~ 87 (462)
.+..++++.+. ..+++|+|||++|+++|..++||+|+|+|||||||++||+ +|++++|+++++.|+.++
T Consensus 118 ~~~~~ll~~g~ipVv~g~~g~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---- 193 (239)
T 1ybd_A 118 PKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALLK---- 193 (239)
T ss_dssp HHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHHT----
T ss_pred HHHHHHHhCCcEEEEECCccCCCCCcHHHHHHHHHhcCCCEEEEeeCCCccCCCCCCCCCCCeEccccCHHHHHHh----
Confidence 34446666662 3567899999999999999999999999999999999998 899999999999988664
Q ss_pred CCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCcccccccc
Q psy11677 88 KSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTD 139 (462)
Q Consensus 88 ~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~ 139 (462)
+.++| |++++..|.++|++++|+||+.|+.|.++|+|+++||+|.+
T Consensus 194 ----g~~~m--~~~a~~~a~~~gv~v~I~~~~~~~~l~~~l~g~~~GT~i~~ 239 (239)
T 1ybd_A 194 ----NLKVM--DATAFALCRERKLNIVVFGIAKEGSLKRVITGEDEGTLVHC 239 (239)
T ss_dssp ----TCCSS--CHHHHHHHHHTTCCEEEECTTSTTHHHHHHHTCSCSEEEEC
T ss_pred ----ccccc--CHHHHHHHHHcCCcEEEEeCCChhHHHHHHcCCCCCeEEcC
Confidence 34778 67799999999999999999999999999999999999964
No 11
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=99.80 E-value=1.2e-19 Score=176.57 Aligned_cols=121 Identities=25% Similarity=0.238 Sum_probs=106.3
Q ss_pred hhhhHHHhHHHHHHHHh------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHH
Q psy11677 9 CEQHFLTNFNELFRSIF------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRD 81 (462)
Q Consensus 9 ~~~~~~~~~~e~~~~~~------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~ 81 (462)
+++..++++.++++.+. ..+++|+|||++|+++|..++||+|+++|||||||++||+ +|++++|+++++.|+.
T Consensus 114 ~~~~~~~~~~~lL~~g~IpVv~~~~g~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~ 193 (243)
T 3ek6_A 114 CEDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADLLLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVI 193 (243)
T ss_dssp BEECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHHTCSEEEEECSSSSCBSSCGGGCTTCCBCSEECHHHHH
T ss_pred cCcCCHHHHHHHHHCCcEEEEECCCCCCcCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceecccccHHHHH
Confidence 44555677888888873 3457899999999999999999999999999999999998 8999999999998875
Q ss_pred hhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCcccccccc
Q psy11677 82 TVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTD 139 (462)
Q Consensus 82 ~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~ 139 (462)
+. +.++| |+.++..|.++|++++|+||+.|+.|.++|+|+++||+|.+
T Consensus 194 ~~--------g~~~~--~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~~ 241 (243)
T 3ek6_A 194 MQ--------GLEVM--DTAAFALARDSDLPLRIFGMSEPGVLLRILHGAQIGTLVQG 241 (243)
T ss_dssp HH--------TCCSS--CHHHHHHHHHTTCCEEEECCCSTTHHHHHHTTCCCSEEECC
T ss_pred hC--------CchhH--HHHHHHHHHHCCCeEEEEcCCCccHHHHHHCCCCCceEEee
Confidence 52 23455 67899999999999999999999999999999999999987
No 12
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=99.80 E-value=4.8e-20 Score=179.03 Aligned_cols=125 Identities=19% Similarity=0.189 Sum_probs=99.9
Q ss_pred HHHhHHHHHHHHh----cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHHhhhhcC
Q psy11677 13 FLTNFNELFRSIF----QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFGQ 87 (462)
Q Consensus 13 ~~~~~~e~~~~~~----~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~~ 87 (462)
-++.++++++.+. .++++|+|||++|+++|..++||+|+|+|||||||++||+ +|++++|+++++.|+.++...
T Consensus 114 ~~~~i~~lL~~g~IpVi~gg~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~a~~i~~i~~~e~~~~~~~- 192 (244)
T 2brx_A 114 DFWEAWKAVQLKKIPVMGGTHPGHTTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGK- 192 (244)
T ss_dssp SHHHHHHHHHTTCBCEECCCSTTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC-
T ss_pred CHHHHHHHHhCCCEEEEcCCCCCCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeeEECHHHHHHHHhc-
Confidence 3556777777763 3367899999999999999999999999999999999998 899999999999999877532
Q ss_pred CCCCCCCcchHHHHHHHH-HHHcCCeEEEEeCCChhHHHHHHcCCcccccccc
Q psy11677 88 KSKVGTGGMDSKVNSATW-ALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTD 139 (462)
Q Consensus 88 ~s~~gtGGM~~Kl~AA~~-a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~ 139 (462)
....+|||..|..+|.. +.+.|++++|+||+.|+.|.++|+|++.||+|.+
T Consensus 193 -~g~~~g~m~~~~~~A~~~~~~~~~~v~I~ng~~~~~l~~~l~g~~~GT~i~~ 244 (244)
T 2brx_A 193 -GIEKAGSSSVIDPLAAKIIARSGIKTIVIGKEDAKDLFRVIKGDHNGTTIEP 244 (244)
T ss_dssp ---------CCSCHHHHHHHHHHTCCEEEECHHHHTCHHHHHTTCSSSEEECC
T ss_pred -cCCCCCCCcchHHHHHHHHHHCCCeEEEEeCCChhHHHHHHcCCCCceEecC
Confidence 13457887666655554 5556889999999999999999999999999974
No 13
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=99.80 E-value=1.3e-19 Score=179.31 Aligned_cols=127 Identities=17% Similarity=0.195 Sum_probs=109.6
Q ss_pred hhhhHHHhHHHHHHHHh-----c-----------CCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC---CCCC
Q psy11677 9 CEQHFLTNFNELFRSIF-----Q-----------KLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW---EEGA 69 (462)
Q Consensus 9 ~~~~~~~~~~e~~~~~~-----~-----------~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~---~p~A 69 (462)
+..+.++.++.+++.+. . ..+++++||++|+++|..++||+|+++|||||||++||+ +|++
T Consensus 129 ~~~~~~~~i~~lL~~g~IpVi~~~~~~~~~e~~G~~~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGvy~~dP~~~~~~~a 208 (276)
T 2ogx_A 129 EHPTVADQLAIHLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQA 208 (276)
T ss_dssp CHHHHHHHHHHHHHHSSEEEEESSCTTGGGCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCTTSTTGGGC
T ss_pred cccChHHHHHHHHhCCCEEEEcCCcccccccccCCcCCCCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCccCCCCC
Confidence 34556677888888772 1 124899999999999999999999999999999999995 7899
Q ss_pred cccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCccccccccCCC
Q psy11677 70 KMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTDASA 142 (462)
Q Consensus 70 klI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~~~ 142 (462)
++|+++++.|+.++. ++|||.+|+.++..+.+.|++++|+||+.|+.|.++|+|++.||+|.+++.
T Consensus 209 ~~i~~i~~~e~~~~~-------g~ggM~~K~~~~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~~ 274 (276)
T 2ogx_A 209 RFLPETSATDLAKSE-------GPLPVDRALLDVMATARHIERVQVVNGLVPGRLTAALRGEHVGTLIRTGVR 274 (276)
T ss_dssp CEESEEEHHHHHTSC-------SCCSSCHHHHHHHHTCSSCCEEEEEETTSTTHHHHHHTTCCCSEEEECSCC
T ss_pred eEcceeCHHHHHHHh-------CcCChHHHHHHHHHHhcCCCeEEEEECCCccHHHHHHcCCCCceEEccCCC
Confidence 999999999887763 689999999887776677889999999999999999999999999987654
No 14
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=99.79 E-value=1.9e-19 Score=176.06 Aligned_cols=116 Identities=18% Similarity=0.213 Sum_probs=97.2
Q ss_pred HHHhHHHHHHHHh------cCCccccChHHHHHHHHHHcCCCeEEEEec-CcccccCCCC-CCCCcccccccHHhHHhhh
Q psy11677 13 FLTNFNELFRSIF------QKLISIKDNDSLAAMLAAEIQADLLILMSD-VNGIYTKAPW-EEGAKMIWTYTSEMRDTVQ 84 (462)
Q Consensus 13 ~~~~~~e~~~~~~------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTD-VdGVY~~dP~-~p~AklI~~I~~~e~~~l~ 84 (462)
...+.+++++.+. ..+++|+|||++|+++|..++||+|+++|| |||||++||+ +|++++|+++++.|+.++.
T Consensus 132 ~~~~~~~lL~~g~IpVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~LiilTD~VdGVy~~dP~~~p~a~~i~~is~~e~~~~~ 211 (256)
T 2va1_A 132 SANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQN 211 (256)
T ss_dssp CHHHHHHHHHTTCEEEEESTTSSSSCCHHHHHHHHHHHHTCSEEEEEESSCCSBCSCC--------CBSEEEHHHHHHHT
T ss_pred hHHHHHHHHhCCcEEEEECCCCCCCCChhHHHHHHHHhCCCCEEEEeecccCeEEcCCCCCCCCCEEccEEcHHHHHHhc
Confidence 3345567777763 457899999999999999999999999999 9999999998 8999999999999987761
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCccccccc
Q psy11677 85 FGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFT 138 (462)
Q Consensus 85 ~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~ 138 (462)
.||| |++++..|.+.|++++|+||+.|+.|.++|+|++.||+|.
T Consensus 212 --------~~~m--k~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~ 255 (256)
T 2va1_A 212 --------LKVM--DATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVS 255 (256)
T ss_dssp --------CCSS--CHHHHHHHHHTTCEEEEEESSSTTHHHHHHTTCSCEEEEE
T ss_pred --------cCCc--cHHHHHHHHHCCCeEEEEeCCCchHHHHHHcCCCCeEEEe
Confidence 3788 9999999999999999999999999999999999999986
No 15
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=99.79 E-value=2.8e-19 Score=174.24 Aligned_cols=117 Identities=23% Similarity=0.263 Sum_probs=103.1
Q ss_pred HhHHHHHHHHh------cCCccccChHHHHHHHHHHcCCCeEEEEe-cCcccccCCCC-CCCCcccccccHHhHHhhhhc
Q psy11677 15 TNFNELFRSIF------QKLISIKDNDSLAAMLAAEIQADLLILMS-DVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFG 86 (462)
Q Consensus 15 ~~~~e~~~~~~------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLT-DVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~ 86 (462)
.+++++++.+. ..+++++|||++|+++|..++||+|+|+| ||||||++||+ +|++++|+++++.|+.+.
T Consensus 118 ~~~~~lL~~g~IpVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~LiilT~DVdGvy~~dP~~~~~a~~i~~i~~~e~~~~--- 194 (252)
T 1z9d_A 118 GRALRHLEKNRIVVFGAGIGSPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIKR--- 194 (252)
T ss_dssp HHHHHHHHTTCEEEEESTTSCTTCCHHHHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHTT---
T ss_pred HHHHHHHhCCCEEEEeCCcCCCCCChHHHHHHHHHhcCCCEEEEecCCCCeeeCCCCCCCCCCeEeeEecHHHHHhc---
Confidence 44566777662 34678999999999999999999999999 99999999998 899999999999887652
Q ss_pred CCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCccccccccCC
Q psy11677 87 QKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTDAS 141 (462)
Q Consensus 87 ~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~~ 141 (462)
+.++| |++++..|.+.|++++|+||+.|+.|.++|+|++.||+|.++.
T Consensus 195 -----~~~~m--k~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~ 242 (252)
T 1z9d_A 195 -----GLKIM--DATASTLSMDNDIDLVVFNMNEAGNIQRVVFGEHIGTTVSNKV 242 (252)
T ss_dssp -----TCCCS--CHHHHHHHHHTTCEEEEEETTSTTHHHHHHTTCCCSEEEECC-
T ss_pred -----ccccc--CHHHHHHHHHcCCeEEEEeCCCchHHHHHHcCCCCceEEecCC
Confidence 34788 8889999999999999999999999999999999999998754
No 16
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=99.79 E-value=2.5e-19 Score=170.55 Aligned_cols=123 Identities=20% Similarity=0.197 Sum_probs=99.3
Q ss_pred HHHhHHHHHHHHh----cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHHhhhhcC
Q psy11677 13 FLTNFNELFRSIF----QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFGQ 87 (462)
Q Consensus 13 ~~~~~~e~~~~~~----~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~~ 87 (462)
.++.++++++.+. .++.+|+|+|++|+.+|..++||+|+++|||||||++||+ +|++++|+++++.|+.++....
T Consensus 91 ~~~~i~~ll~~g~ipVi~~g~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~~~~~~ 170 (219)
T 2ij9_A 91 DFMEAEELSKLYRVVVMGGTFPGHTTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRS 170 (219)
T ss_dssp SHHHHHHHHTTCSEEEECCCSSSSCTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC-
T ss_pred CHHHHHHHHHCCCEEEEeCCCCCCCchHHHHHHHHHcCCCeEEEeeCCCceecCCCCCCCCCeEeeeeCHHHHHHHHhcC
Confidence 3555667777662 3367899999999999999999999999999999999998 8999999999999998875321
Q ss_pred CCCCCCCcchHHH-HHHHHHHHcCCeEEEEeCCChhHHHHHHcCCccccccc
Q psy11677 88 KSKVGTGGMDSKV-NSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFT 138 (462)
Q Consensus 88 ~s~~gtGGM~~Kl-~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~ 138 (462)
+..+|||..|. .++..+.+.|++++|+|| .|+.|.++|+|++.||+|.
T Consensus 171 --g~~~g~~~~~~~~a~~~~~~~~~~v~I~~g-~~~~l~~~~~g~~~GT~i~ 219 (219)
T 2ij9_A 171 --SAKAGTNVVIDLLAAKIIERSKIKTYVILG-TPENIMKAVKGEAVGTVIA 219 (219)
T ss_dssp ------CCCCCSCHHHHHHHHHHTCCEEEEEC-CHHHHHHHHTTCCCSEEEC
T ss_pred --CCCCCCccchHHHHHHHHHHCCCeEEEEEC-CHhHHHHHHcCCCCCeEeC
Confidence 23467765554 455556667889999999 9999999999999999984
No 17
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=99.79 E-value=2e-19 Score=174.56 Aligned_cols=118 Identities=22% Similarity=0.261 Sum_probs=97.2
Q ss_pred HhHHHHHHHHh------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHHhhhhcC
Q psy11677 15 TNFNELFRSIF------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFGQ 87 (462)
Q Consensus 15 ~~~~e~~~~~~------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~~ 87 (462)
.+++++++.+. ..+++|+|||++|+.+|..++||+|+|+|||||||++||+ +|++++|+++++.|+.++
T Consensus 119 ~~~~~ll~~g~ipVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~dP~~~p~a~~i~~i~~~e~~~~---- 194 (247)
T 2a1f_A 119 SEAIKMLREKRVVIFSAGTGNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVIDK---- 194 (247)
T ss_dssp HHHHHHHHTTCEEEEESTTSCSSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHHHHHT----
T ss_pred HHHHHHHhCCCEEEEeCCcCCCCCCcHHHHHHHHHhCCCCEEEEEeCCCcccCCCCCCCCCCeEcccCCHHHHHHc----
Confidence 44566777662 3467899999999999999999999999999999999998 899999999999988764
Q ss_pred CCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCccccccccCCC
Q psy11677 88 KSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTDASA 142 (462)
Q Consensus 88 ~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~~~ 142 (462)
+.++| |++++..|.+.|++++|+||+.|+.+.++++|+.+||+|....+
T Consensus 195 ----g~~~m--~~~aa~~a~~~gv~v~I~~~~~~~~l~~~l~g~~~GT~~~~~~~ 243 (247)
T 2a1f_A 195 ----ELKVM--DLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEGTTICEGHH 243 (247)
T ss_dssp ----TCCSS--CHHHHHHHHHHTCCEEEEETTSTTHHHHHHTCSCSSEEECCC--
T ss_pred ----Ccccc--CHHHHHHHHHcCCcEEEEeCCCchHHHHHHcCCCCceEEeeccc
Confidence 34778 67799999999999999999999999999999999999987654
No 18
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A*
Probab=99.79 E-value=7.6e-20 Score=178.34 Aligned_cols=121 Identities=23% Similarity=0.322 Sum_probs=94.3
Q ss_pred HHHhHHHHHHHHhc------------CCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHh
Q psy11677 13 FLTNFNELFRSIFQ------------KLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEM 79 (462)
Q Consensus 13 ~~~~~~e~~~~~~~------------~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e 79 (462)
.++.++.+++.+.. .++.++|+|++|+.+|..++||+|+|+|||||||++||+ +|++++|++++. +
T Consensus 114 ~~~~i~~ll~~g~ipVi~~~~~~~~~~~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~~dp~~~~~a~~i~~i~~-~ 192 (249)
T 3ll5_A 114 DYTPLIRYIDAGFVPVSYGDVYIKDEHSYGIYSGDDIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDIDT-N 192 (249)
T ss_dssp CCHHHHHHHHTTCEEEEECEEEEEETTEEEEECHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCCEECC-C
T ss_pred cHHHHHHHHHCCCEEEECCCEEEcCCCceeeecHHHHHHHHHHhcCCCEEEEEeCCCccCCCCCCCCCCcEEHHHHHH-H
Confidence 45667788887621 234589999999999999999999999999999999997 899999999942 2
Q ss_pred HHhhhhcCCCCCCCCcchHHHHHHHHH-HHcCCeEEEEeCCChhHHHHHHcCCcc-ccccc
Q psy11677 80 RDTVQFGQKSKVGTGGMDSKVNSATWA-LDRGVSVVICNGMQKEAIKQIVAGRKI-GTFFT 138 (462)
Q Consensus 80 ~~~l~~~~~s~~gtGGM~~Kl~AA~~a-~~~Gv~v~I~sG~~~~~L~~~l~g~~~-GT~I~ 138 (462)
+. ....+.+++|||.+|+++|..+ +++|++++|+||+.|+.|.+ |.|+++ ||+|.
T Consensus 193 ~~---~~~~~~~~tGgM~~Kl~aA~~a~~~~Gv~v~I~~g~~~~~l~~-l~g~~~~GT~i~ 249 (249)
T 3ll5_A 193 IT---FDRVQNDVTGGIGKKFESMVKMKSSVKNGVYLINGNHPERIGD-IGKESFIGTVIR 249 (249)
T ss_dssp C----------------HHHHHHHHHHHTTCTTCEEEEETTSGGGGGG-TTSTTCCSEEEC
T ss_pred Hh---cccCCCeeECCHHHHHHHHHHHHHhcCCEEEEEeCCChhHHHH-hCCCCCCCEEeC
Confidence 21 2234568899999999999999 89999999999999999888 999988 99984
No 19
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=99.78 E-value=4.3e-19 Score=172.20 Aligned_cols=119 Identities=23% Similarity=0.250 Sum_probs=103.1
Q ss_pred hhhhHHHhHHHHHHHHh------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHH
Q psy11677 9 CEQHFLTNFNELFRSIF------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRD 81 (462)
Q Consensus 9 ~~~~~~~~~~e~~~~~~------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~ 81 (462)
|++..++++.++++.+. ..+.+|+|||++|+++|..++||+|+++|||||||++||+ +|++++|+++++.|+.
T Consensus 113 ~~~~~~~~i~~lL~~g~ipVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~ 192 (240)
T 4a7w_A 113 CESYIYRKAIRHLEKGRVVIFGAGTGNPFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDAL 192 (240)
T ss_dssp SEECCHHHHHHHHHTTCEEEEESTTSCTTSCHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEECHHHHH
T ss_pred cCcCcHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHcCCCEEEEccCCCceECCCCCCCCCCeEcceecHHHHH
Confidence 44455677788888762 3457899999999999999999999999999999999998 8999999999998876
Q ss_pred hhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCC-cccccc
Q psy11677 82 TVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGR-KIGTFF 137 (462)
Q Consensus 82 ~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~-~~GT~I 137 (462)
+. +.++| |++++..|.++|++++|+||+.|+.|.+++.|+ ++||+|
T Consensus 193 ~~--------g~~~m--~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~g~GT~i 239 (240)
T 4a7w_A 193 IG--------DIEVM--DDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQGVFSMV 239 (240)
T ss_dssp HS--------SCCSS--CHHHHHHHHHTTCCEEEEESSSTTHHHHHHHHSCSSCEEE
T ss_pred hc--------Ccccc--HHHHHHHHHHCCCeEEEECCCCccHHHHHHCCCCCCceee
Confidence 52 46788 578999999999999999999999988888766 689987
No 20
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=99.78 E-value=3.7e-19 Score=175.29 Aligned_cols=106 Identities=22% Similarity=0.292 Sum_probs=94.3
Q ss_pred CccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHH
Q psy11677 28 LISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWA 106 (462)
Q Consensus 28 ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a 106 (462)
+++++|||++|+++|..++||+|+++|||||||++||+ +|++++|+++++.|+.++..+ ++ ...|||.+|+++|.
T Consensus 163 ~~~~~~~D~~Aa~lA~~l~Ad~Li~lTDVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~-g~-~~~ggm~~kl~aa~-- 238 (270)
T 2ogx_B 163 VIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKDATFIPRISVDEMKAKGLH-DS-ILEFPVLDLLQSAQ-- 238 (270)
T ss_dssp SSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCSSSCTTCCEESEEEHHHHHHTTCC-CT-TSCHHHHHHHHHCS--
T ss_pred cCCCCCcHHHHHHHHHhcCCCEEEEEeCCCcccCCCCCCCCCCeEcceeCHHHHHHHhcC-CC-cccHHHHHHHHHhh--
Confidence 36789999999999999999999999999999999997 899999999999999887632 22 34489999999875
Q ss_pred HHcCCeEEEEeCCChhHHHHHHcCCcccccccc
Q psy11677 107 LDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTD 139 (462)
Q Consensus 107 ~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~ 139 (462)
.+++++|+||+.|+.|.++|+|++.||+|.+
T Consensus 239 --~~~~v~I~~g~~~~~l~~~l~g~~~GT~i~~ 269 (270)
T 2ogx_B 239 --HVREVQVVNGLVPGNLTRALAGEHVGTIITA 269 (270)
T ss_dssp --SCCEEEEEETTSTTHHHHHHTTCCCSEEEEC
T ss_pred --cCCcEEEEeCCCchHHHHHHcCCCCCeEecC
Confidence 4579999999999999999999999999975
No 21
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=99.77 E-value=7.6e-20 Score=181.81 Aligned_cols=126 Identities=16% Similarity=0.203 Sum_probs=101.5
Q ss_pred HHHhHHHHHHHHh----------cCC--ccccChHHHHHHHHHH-cCCCeEEEEecCcccccCCCCCCCCcccccccHHh
Q psy11677 13 FLTNFNELFRSIF----------QKL--ISIKDNDSLAAMLAAE-IQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEM 79 (462)
Q Consensus 13 ~~~~~~e~~~~~~----------~~e--i~~gdnD~lAa~lA~~-l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e 79 (462)
.++.++++++.+. .++ +.++|+|++|+++|.. ++||+|+|+|||||||++||+ ++++|+++++.|
T Consensus 136 ~~~~i~~lL~~g~IpVi~gd~~~~~~g~~~~~~~D~~Aa~lA~~~l~Ad~LiilTDVdGVy~~dP~--~a~~i~~is~~e 213 (286)
T 3d40_A 136 RSEVLRDVLDHGALPVLAGDALFDEHGKLWAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDGAG--GDTILPEVDARS 213 (286)
T ss_dssp CCSHHHHHHHTTCEEEEECEEEEBTTSCEEEECGGGHHHHTTTTCCSCEEEEEEESSSSCEECC-----CEECCEEETTS
T ss_pred hHHHHHHHHHCcCEEEEcCCeEEcCCCCEEeeCHHHHHHHHHHhhCCCCEEEEecCCCeeEcCCCC--CCcCCcccCHHH
Confidence 3456777777762 122 3679999999999999 999999999999999999998 799999999976
Q ss_pred HH---hhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcC-----Ccc-ccccccC
Q psy11677 80 RD---TVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAG-----RKI-GTFFTDA 140 (462)
Q Consensus 80 ~~---~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g-----~~~-GT~I~~~ 140 (462)
.+ ++.+.+++.+++|||.+|+++|..++++|++++|+||+.|+.|.++|++ +.+ ||.|..+
T Consensus 214 ~~~l~~~~~~~~~~~~tggM~~Kl~Aa~~a~~~gv~v~I~~g~~p~~l~~l~t~~~~~~~~~~~t~i~~~ 283 (286)
T 3d40_A 214 PEQAYAALWGSSEWDATGAMHTKLDALVTCARRGAECFIMRGDPGSDLEFLTAPFSSWPAHVRSTRITTT 283 (286)
T ss_dssp CHHHHHHHHHSCC----CHHHHHHHHHHHHHHTTCEEEEEECCTTCCCGGGGSCGGGSCTTCCCEEEEC-
T ss_pred HHHHHHhhccccCCcccCcHHHHHHHHHHHHHCCCcEEEEeCCCCCcHHHHhcCcccCcccccceeeeec
Confidence 54 4344455678999999999999999999999999999999999999999 776 9999754
No 22
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=99.77 E-value=4.3e-19 Score=178.10 Aligned_cols=120 Identities=18% Similarity=0.222 Sum_probs=102.3
Q ss_pred HHHhHHHHHHHHh-----------------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccc
Q psy11677 13 FLTNFNELFRSIF-----------------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTY 75 (462)
Q Consensus 13 ~~~~~~e~~~~~~-----------------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I 75 (462)
.++.++.+++.+. .+++.|+|+|++|+.+|..++||+|+|+|||||||+ ||.+|++++|+++
T Consensus 171 ~~~~i~~lL~~g~IpIi~Gg~Gipv~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~-dp~~~~a~~i~~i 249 (310)
T 2we5_A 171 EAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCI-NYGKPDEKQLTNV 249 (310)
T ss_dssp THHHHHHHHHTTCEEECCGGGCEEEETTTTEECCCCCCHHHHHHHHHHHTTCSEEEEECSCSSCEE-STTSTTCEECCEE
T ss_pred hHHHHHHHHHCCCEEEEECCCCCCCcCCCCCCcEeecCHHHHHHHHHHHcCCCEEEEEeCchHhhC-CCCCCCCeECCEE
Confidence 4566777777763 123455899999999999999999999999999999 7888999999999
Q ss_pred cHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHHcCC--eEEEEeCCChhHHHHHHcCCccccccc
Q psy11677 76 TSEMRDTVQFGQKSKVGTGGMDSKVNSATWALDRGV--SVVICNGMQKEAIKQIVAGRKIGTFFT 138 (462)
Q Consensus 76 ~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv--~v~I~sG~~~~~L~~~l~g~~~GT~I~ 138 (462)
+..|+.++... +.+++|||.+|+++|..++++|+ +++|++ ++.|.++|+|++.||+|.
T Consensus 250 ~~~e~~~~~~~--g~~~~GgM~~Kv~aa~~a~~~gv~~~v~I~~---~~~l~~~l~g~~~GT~i~ 309 (310)
T 2we5_A 250 TVAELEEYKQA--GHFAPGSMLPKIEAAIQFVESQPNKQAIITS---LENLGSMSGDEIVGTVVT 309 (310)
T ss_dssp EHHHHHHHHHT--TCSCTTTTHHHHHHHHHHHHHSTTCEEEEEC---SGGGGGCBTTBCCSEEEE
T ss_pred cHHHHHHHhhC--CCCCCCChHHHHHHHHHHHHcCCCceEEECc---HHHHHHHHcCCCCCeEEe
Confidence 99999888633 34677999999999999999999 899997 456889999998999986
No 23
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=99.77 E-value=1.5e-18 Score=171.63 Aligned_cols=119 Identities=31% Similarity=0.386 Sum_probs=102.1
Q ss_pred HHhHHHHHHHHhc----------CCccc-cChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhHHh
Q psy11677 14 LTNFNELFRSIFQ----------KLISI-KDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMRDT 82 (462)
Q Consensus 14 ~~~~~e~~~~~~~----------~ei~~-gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~~~ 82 (462)
++.++++++.+.. .+-.| .|+|++|+.+|..++||+|+++|||||||++ | ++|+++++.|+.+
T Consensus 150 ~~~i~~ll~~g~IpVi~~v~~~~~G~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~----~--~~i~~i~~~e~~~ 223 (282)
T 2bty_A 150 PEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKD----G--KLISTLTPDEAEE 223 (282)
T ss_dssp THHHHHHHHTTCEEEEESEEECSSSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCEET----T--EECCEECHHHHHH
T ss_pred HHHHHHHHHCCCEEEECCCccCCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeecC----c--hhhhhCCHHHHHH
Confidence 5667777777621 12234 4999999999999999999999999999996 3 9999999999988
Q ss_pred hhhcCCCCCCCCcchHHHHHHHHHHHcCCe-EEEEeCCChhHH-HHHHcCCccccccccCC
Q psy11677 83 VQFGQKSKVGTGGMDSKVNSATWALDRGVS-VVICNGMQKEAI-KQIVAGRKIGTFFTDAS 141 (462)
Q Consensus 83 l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~-v~I~sG~~~~~L-~~~l~g~~~GT~I~~~~ 141 (462)
+.. ...++|||.+|+++|..++++|++ ++|+||+.|+.| .++|+|++.||+|.+++
T Consensus 224 ~~~---~g~~~gGM~~K~~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~~ 281 (282)
T 2bty_A 224 LIR---DGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKELE 281 (282)
T ss_dssp HHT---TTCSCTTHHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSCSSEEECCCC
T ss_pred HHH---cCCCCCcHHHHHHHHHHHHHhCCCeEEEecCCCCchHHHHHhcCCCCceEEEeCC
Confidence 762 357899999999999999999996 999999999997 89999999999998754
No 24
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=99.76 E-value=1.6e-18 Score=174.50 Aligned_cols=100 Identities=25% Similarity=0.336 Sum_probs=91.0
Q ss_pred ChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHHcCC-
Q psy11677 33 DNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWALDRGV- 111 (462)
Q Consensus 33 dnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv- 111 (462)
|+|++|+.+|..++||+|+|+|||||||+ ||.+|++++|++++..|+.++... +.+++|||.+|+++|..++++|+
T Consensus 215 d~D~~Aa~lA~~l~Ad~LiilTdVdGVy~-dp~~p~a~~i~~i~~~e~~~~~~~--g~~~~GgM~~Kv~aa~~a~~~gv~ 291 (316)
T 2e9y_A 215 DKDLASSLLATQLNADLLVILTDVPGVAV-NYGREGERWLRRAAASELKKYLRE--GHFPPGSMGPKVEAAISFVERTGK 291 (316)
T ss_dssp CHHHHHHHHHHHTTCSEEEEEESSSSCEE-TTTSTTCEECSEEEHHHHHHHHHT--TCSCTTTHHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHcCCCEEEEEeCchHhhC-CCCCCCCcCCcEEcHHHHHHHHhc--CCCCCCCHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999 788899999999999999888642 45788999999999999999999
Q ss_pred eEEEEeCCChhHHHHHHcCCcccccccc
Q psy11677 112 SVVICNGMQKEAIKQIVAGRKIGTFFTD 139 (462)
Q Consensus 112 ~v~I~sG~~~~~L~~~l~g~~~GT~I~~ 139 (462)
+++|++ ++.|.++|+| +.||+|.+
T Consensus 292 ~v~I~~---~~~l~~~l~g-~~GT~i~~ 315 (316)
T 2e9y_A 292 PAVIGS---LEEARQVLSL-QAGTVVML 315 (316)
T ss_dssp CEEEEE---STTHHHHHTT-SSSEEEEC
T ss_pred eEEECc---HHHHHHHHcC-CCCeEEec
Confidence 999997 4559999998 79999975
No 25
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=99.75 E-value=3.5e-18 Score=170.74 Aligned_cols=120 Identities=23% Similarity=0.340 Sum_probs=102.8
Q ss_pred HHhHHHHHHHHhc--------CC--cccc-ChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhHHh
Q psy11677 14 LTNFNELFRSIFQ--------KL--ISIK-DNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMRDT 82 (462)
Q Consensus 14 ~~~~~e~~~~~~~--------~e--i~~g-dnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~~~ 82 (462)
++.++++++.+.. ++ -.|+ |+|++|+++|..++||+|+++|||||||++ ++++|+++++.|+.+
T Consensus 166 ~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~-----~a~~i~~i~~~e~~~ 240 (300)
T 2buf_A 166 VGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDK-----QGQVLTGLSTEQVNE 240 (300)
T ss_dssp HHHHHHHHHTTCEEEEEEEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCT-----TSCBCCEECHHHHHH
T ss_pred HHHHHHHHHCCCEEEEcCceeCCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeECC-----CCcChhhCCHHHHHH
Confidence 5567777777621 22 2445 999999999999999999999999999996 489999999999988
Q ss_pred hhhcCCCCCCCCcchHHHHHHHHHHHcCCe-EEEEeCCChhHH-HHHHcCCccccccccCC
Q psy11677 83 VQFGQKSKVGTGGMDSKVNSATWALDRGVS-VVICNGMQKEAI-KQIVAGRKIGTFFTDAS 141 (462)
Q Consensus 83 l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~-v~I~sG~~~~~L-~~~l~g~~~GT~I~~~~ 141 (462)
+.. +..++|||.+|+++|..++++|++ ++|+||+.|+.| .++|+|++.||+|.+++
T Consensus 241 ~~~---~~~~~ggM~~Kv~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~~ 298 (300)
T 2buf_A 241 LIA---DGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRK 298 (300)
T ss_dssp HHH---TTCSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHSSTTCCSEEEECCC
T ss_pred HHH---cCCCCCccHHHHHHHHHHHHhCCCEEEEeeCCCCchHHHHHhcCCCCceEEEeCC
Confidence 763 356799999999999999999996 999999999986 89999999999998754
No 26
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=99.75 E-value=1.9e-18 Score=170.21 Aligned_cols=119 Identities=23% Similarity=0.242 Sum_probs=100.8
Q ss_pred HHHhHHHHHHHHh------------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhH
Q psy11677 13 FLTNFNELFRSIF------------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMR 80 (462)
Q Consensus 13 ~~~~~~e~~~~~~------------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~ 80 (462)
.++.++.+++.+. ..+++++|+|++|+++|..++||+|+++||||||| .|| +++++++..++
T Consensus 132 ~~~~i~~lL~~g~ipVi~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~-~d~-----~~i~~~~~~e~ 205 (266)
T 3k4o_A 132 DTSAIKEMLKRNLVPVIHGDIVIDDKNGYRIISGDDIVPYLANELKADLILYATDVDGVL-IDN-----KPIKRIDKNNI 205 (266)
T ss_dssp CCHHHHHHHHTTCEEEEECEEEEESSSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSSB-SSS-----SBCSEECTTTH
T ss_pred cHHHHHHHHHCCCEEEEeCCEEEcCCCCeeeeCHHHHHHHHHHHcCCCEEEEEecCCeEE-eCC-----eecCcCCHHHH
Confidence 3567788888762 22478899999999999999999999999999999 654 67888876554
Q ss_pred H---hhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCccccccccC
Q psy11677 81 D---TVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTDA 140 (462)
Q Consensus 81 ~---~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~ 140 (462)
. +..+++.+.+++|||.+|+++|..+++ +++|+||+.|+.|.++|+|+++||+|.+.
T Consensus 206 ~~l~~~~~~~~~~~~tGGM~~Kv~aa~~a~~---~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 265 (266)
T 3k4o_A 206 YKILNYLSGSNSIDVTGGMKYKIEMIRKNKC---RGFVFNGNKANNIYKALLGEVEGTEIDFS 265 (266)
T ss_dssp HHHHHHHHSTTCSCCSSHHHHHHHHHHHTTC---EEEEEETTSTTHHHHHHTTCCCSEEEECC
T ss_pred HHHHHHhccccCCcccCCHHHHHHHHHHHhc---CEEEEeCCCccHHHHHhCCCCCceEEEeC
Confidence 4 334556678999999999999998887 99999999999999999999999999875
No 27
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803}
Probab=99.73 E-value=4.1e-18 Score=171.08 Aligned_cols=103 Identities=17% Similarity=0.183 Sum_probs=90.0
Q ss_pred ccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHHcC
Q psy11677 31 IKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWALDRG 110 (462)
Q Consensus 31 ~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~G 110 (462)
++|+|++|+.+|..++||+|||+|||||||+ ||++|++++|++++..|+.+++. .+.+++|||.+|+++|..+++.|
T Consensus 214 ~id~D~~Aa~lA~~L~AD~LIiLTDVdGVy~-dp~~p~a~~I~~it~~e~~~li~--~g~~~~GGM~pKl~AA~~av~~g 290 (317)
T 3kzf_A 214 VIDKDLATSLLAKTLNSDYLMILTDVLNACI-NYKKPDERKLEEIKLSEILALEK--DGHFAAGSMGPKVRAAIEFTQAT 290 (317)
T ss_dssp CCCHHHHHHHHHHHHTCSCEEECCSSSSCEE-SSSCSSCEECCEEEHHHHHHHHT--TTSCC--CCHHHHHHHHHHHHHH
T ss_pred eccHHHHHHHHHHHhCCCEEEEecCCCeeeC-CCCCCCCeECcCcCHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHcC
Confidence 5679999999999999999999999999999 89889999999999999988874 34578999999999999998865
Q ss_pred C-eEEEEeCCChhHHHHHHcCCccccccccC
Q psy11677 111 V-SVVICNGMQKEAIKQIVAGRKIGTFFTDA 140 (462)
Q Consensus 111 v-~v~I~sG~~~~~L~~~l~g~~~GT~I~~~ 140 (462)
+ +++|+|+ +.+.++|+|+ .||+|.++
T Consensus 291 g~~v~I~s~---~~l~~~l~G~-~GT~I~~d 317 (317)
T 3kzf_A 291 GKMSIITSL---STAVDALNGK-CGTRIIKD 317 (317)
T ss_dssp CCCEEECCG---GGHHHHHTTS-SSEEEECC
T ss_pred CCeEEEcch---HHHHHHHCCC-CCeEEecC
Confidence 5 9999996 4577999998 89999863
No 28
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1
Probab=99.73 E-value=1e-17 Score=168.66 Aligned_cols=102 Identities=25% Similarity=0.294 Sum_probs=89.7
Q ss_pred ccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHHc-
Q psy11677 31 IKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWALDR- 109 (462)
Q Consensus 31 ~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~- 109 (462)
|+|+|++|+.+|..++||+|+++|||||||++|| +|++++|+++++.|+.+++.. +.+++|||.+|+++|..+++.
T Consensus 212 ~~d~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~~p-~~~a~~i~~i~~~e~~~~~~~--g~~~~GgM~~Kv~aa~~~~~~~ 288 (314)
T 1e19_A 212 VIDKDLAGEKLAEEVNADIFMILTDVNGAALYYG-TEKEQWLREVKVEELRKYYEE--GHFKAGSMGPKVLAAIRFIEWG 288 (314)
T ss_dssp CCCHHHHHHHHHHHTTCSEEEEEESSSSCEETTT-STTCEECCEEEHHHHHHHHHT--TCSCTTTHHHHHHHHHHHHHHT
T ss_pred eccHHHHHHHHHHHcCCCEEEEeccCCEEECCCC-CCCCeECCEECHHHHHHHHhC--CCcCCCChHHHHHHHHHHHHhC
Confidence 5888999999999999999999999999999998 689999999999999888643 457889999999999886665
Q ss_pred CCeEEEEeCCChhHHHHHHcCCcccccccc
Q psy11677 110 GVSVVICNGMQKEAIKQIVAGRKIGTFFTD 139 (462)
Q Consensus 110 Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~ 139 (462)
+++++|+++ +.|.++|+| +.||+|.+
T Consensus 289 ~~~v~I~~~---~~l~~~~~g-~~GT~i~~ 314 (314)
T 1e19_A 289 GERAIIAHL---EKAVEALEG-KTGTQVLP 314 (314)
T ss_dssp CSEEEEEEG---GGHHHHHTT-SSSEEEEC
T ss_pred CCeEEEecH---HHHHHHHcC-CCCeEEcC
Confidence 569999985 458899998 58999964
No 29
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=99.72 E-value=9.7e-18 Score=163.61 Aligned_cols=120 Identities=28% Similarity=0.286 Sum_probs=104.4
Q ss_pred hhhHHHhHHHHHHHHh-----------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHH
Q psy11677 10 EQHFLTNFNELFRSIF-----------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSE 78 (462)
Q Consensus 10 ~~~~~~~~~e~~~~~~-----------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~ 78 (462)
++..++.++.+++.+. .+++.++++|++|+.+|..++|| |+++|||||||++ ++++|+++++.
T Consensus 126 ~~~~~~~i~~ll~~g~ipVi~~~g~~~~g~~~~~~~D~~Aa~lA~~l~Ad-li~ltdV~Gv~~~-----d~~~i~~i~~~ 199 (258)
T 1gs5_A 126 QPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGAD-LILLSDVSGILDG-----KGQRIAEMTAA 199 (258)
T ss_dssp EECCCHHHHHHHHTTCEEEECSEEECTTSCEEECCHHHHHHHHHHHHTCE-EEEEESSSSCBCT-----TSCBCCEECHH
T ss_pred eEECHHHHHHHHHCCCEEEEeCCcCCCCCcEEEecHHHHHHHHHHHhCCc-EEEEeCCCceECC-----CCCCCcccCHH
Confidence 4455667888888772 34667899999999999999999 9999999999997 47999999999
Q ss_pred hHHhhhhcCCCCCCCCcchHHHHHHHHHHHc-CCeEEEEeCCChhHHHHHHcCCccccccc
Q psy11677 79 MRDTVQFGQKSKVGTGGMDSKVNSATWALDR-GVSVVICNGMQKEAIKQIVAGRKIGTFFT 138 (462)
Q Consensus 79 e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~-Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~ 138 (462)
|+.++.. +..++|||.+|+.+|..+++. |++++|+||+.|+.|.++|+|++.||+|.
T Consensus 200 e~~~l~~---~~~~~gGm~~k~~~a~~~~~~~~~~v~I~~~~~~~~l~~~~~~~~~GT~i~ 257 (258)
T 1gs5_A 200 KAEQLIE---QGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRIL 257 (258)
T ss_dssp HHHHHHH---TTCSCTHHHHHHHHHHHHHHHHTSCEEEEESSCGGGHHHHHTTCCSSEEEC
T ss_pred HHHHHHh---cCCCCCcHHHHHHHHHHHHHhCCCEEEEecCCCchHHHHHhcCCCCcEEEe
Confidence 9988762 357899999999999998764 78999999999999999999999999986
No 30
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=99.70 E-value=3.7e-17 Score=171.36 Aligned_cols=118 Identities=19% Similarity=0.193 Sum_probs=103.4
Q ss_pred HHhHHHHHHHHh-----------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhHHh
Q psy11677 14 LTNFNELFRSIF-----------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMRDT 82 (462)
Q Consensus 14 ~~~~~e~~~~~~-----------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~~~ 82 (462)
.+.++.+++.+. ++++.++|+|++|+.+|..++||+|+|+|||||||++ ++++|++++..|+.+
T Consensus 175 ~~~i~~lL~~g~ipIi~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~lTdvdGv~~~-----~~~~i~~i~~~e~~~ 249 (456)
T 3d2m_A 175 TAALRFQLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRP-----DGTLAETLSAQEAQS 249 (456)
T ss_dssp HHHHHHHHHTTCEEEECSEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCBCT-----TSCBCSEEEHHHHHH
T ss_pred HHHHHHHHHCCCeEEECCcccCCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCccccCC-----CCCccccCCHHHHHH
Confidence 466778888772 3467789999999999999999999999999999986 589999999999988
Q ss_pred hhhcCCCCCCCCcchHHHHHHHHHHHcCC-eEEEEeCCChhHH-HHHHcCCccccccccCC
Q psy11677 83 VQFGQKSKVGTGGMDSKVNSATWALDRGV-SVVICNGMQKEAI-KQIVAGRKIGTFFTDAS 141 (462)
Q Consensus 83 l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv-~v~I~sG~~~~~L-~~~l~g~~~GT~I~~~~ 141 (462)
++.. ++|||.+|+++|..+++.|+ +++|+||..|+.+ .++|+|++.||+|.++.
T Consensus 250 ~~~~-----g~ggm~~Kl~aa~~a~~~gv~~v~I~~~~~~~~ll~~l~~~~~~GT~i~~~~ 305 (456)
T 3d2m_A 250 LAEH-----AASETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEA 305 (456)
T ss_dssp HHTT-----CCHHHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCSSCSSEEEECCC
T ss_pred HHhc-----cCCChHHHHHHHHHHHHhCCCEEEEecCcCCchHHHHHHhhcCCceeeeccc
Confidence 7632 34999999999999999999 6999999999996 88889999999998754
No 31
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=99.70 E-value=3.7e-17 Score=159.55 Aligned_cols=118 Identities=18% Similarity=0.215 Sum_probs=99.0
Q ss_pred HHHhHHHHHHHHh----c--CCccccChHHHHHHHHHHcCCCeEEEEe-cCcccccCCCC-CCCCcccccccHHhHHhhh
Q psy11677 13 FLTNFNELFRSIF----Q--KLISIKDNDSLAAMLAAEIQADLLILMS-DVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQ 84 (462)
Q Consensus 13 ~~~~~~e~~~~~~----~--~ei~~gdnD~lAa~lA~~l~Ad~LIiLT-DVdGVY~~dP~-~p~AklI~~I~~~e~~~l~ 84 (462)
...++.++++.+. . .+.++.++|++|+.+|..++||+|+++| ||||||++||+ +|++++|+++++.|+.++
T Consensus 122 ~~~~~~~lL~~g~IpVi~gg~g~~~vttD~~Aa~lA~~l~Ad~liilT~DVdGVy~~dP~~~p~a~~i~~is~~e~~~~- 200 (255)
T 2jjx_A 122 IRLRAVHHLDNGYIVIFGGGNGQPFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQ- 200 (255)
T ss_dssp CHHHHHHHHHTTCEEEEESTTSCSSCCSHHHHHHHHHHHTCSEEEEEESSCCSCBSSCTTTCSSCCBCSEEEHHHHHHT-
T ss_pred cHHHHHHHHhCCcEEEEeCCCCCCccchHHHHHHHHHhcCCCEEEEEeCCcCeeECCCCCCCCCCeEeeEecHHHHHHc-
Confidence 3344446666652 1 2456788999999999999999999999 99999999998 899999999999877664
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCccccccccC
Q psy11677 85 FGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTDA 140 (462)
Q Consensus 85 ~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~ 140 (462)
|+|+|.+ .++..+.+.|++++|+||+.|+.|.++|+|++.||+|.++
T Consensus 201 -------G~~~m~~--~a~~~a~~~gi~v~I~~~~~~~~l~~~l~g~~~GT~I~~~ 247 (255)
T 2jjx_A 201 -------NIQVMDQ--AALLLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLINDD 247 (255)
T ss_dssp -------TCCSSCH--HHHHHHHHHTCCEEEEETTSTTHHHHHHBTCCCSEEEESS
T ss_pred -------CCccCHH--HHHHHHHHcCCeEEEEeCCCchHHHHHhcCCCCceEEecC
Confidence 4688975 4666677789999999999999999999999999999874
No 32
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=99.69 E-value=5.8e-17 Score=164.31 Aligned_cols=103 Identities=18% Similarity=0.273 Sum_probs=88.9
Q ss_pred cccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHHc
Q psy11677 30 SIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWALDR 109 (462)
Q Consensus 30 ~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~ 109 (462)
.|+|||++|+++|..++||+|||||||||||+++| +|++++|++++..|+.++.. .+.+++|||.+|++||..++++
T Consensus 228 ~vid~D~~Aa~lA~~l~Ad~LiiLTdV~gv~~~~~-~~~~~~i~~it~~e~~~~~~--~g~~~~GgM~pKv~Aa~~~v~~ 304 (332)
T 4axs_A 228 GVIDKDFALAKIADAVNADIFVVLTAVDYVYVDFN-KPTQKALKTVDVKALNNFIN--QDQFAKGSMLPKIKAAMGFVNG 304 (332)
T ss_dssp SCCCHHHHHHHHHHHTTCSEEEEECSCSSCEESTT-STTCEECSSCBHHHHHHHHH--TTCSCTTTTHHHHHHHHHHHTT
T ss_pred eeechHHHHHHHHHHhCCceEEEEecCCceEcCCC-CcchhhcccCCHHHHHHHHH--CCCcCcCCcHHHHHHHHHHHHh
Confidence 47999999999999999999999999999999776 47889999999999988763 3468899999999999999998
Q ss_pred CC--eEEEEeCCChhHHHHHHcCCcccccccc
Q psy11677 110 GV--SVVICNGMQKEAIKQIVAGRKIGTFFTD 139 (462)
Q Consensus 110 Gv--~v~I~sG~~~~~L~~~l~g~~~GT~I~~ 139 (462)
|. .++|.+ ++.+.+++.|+ .||+|..
T Consensus 305 g~g~~~iI~~---~~~~~~~l~g~-~GT~IvA 332 (332)
T 4axs_A 305 HPNRSAIIAD---LSKVEDALKGL-SGTKIIA 332 (332)
T ss_dssp CTTCEEEEEC---STTHHHHTTTS-SSEEEBC
T ss_pred CCCcEEEECC---HHHHHHHHCCC-CCcEEeC
Confidence 76 566654 45588999997 7999963
No 33
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A*
Probab=99.64 E-value=6.1e-16 Score=155.34 Aligned_cols=120 Identities=16% Similarity=0.109 Sum_probs=98.4
Q ss_pred HHHhHHHHHHHHh-----------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHh-H
Q psy11677 13 FLTNFNELFRSIF-----------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEM-R 80 (462)
Q Consensus 13 ~~~~~~e~~~~~~-----------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e-~ 80 (462)
-.+.++.+++.+. ..++.++|+|++|+.+|..++||+|+|+|||||||++ |++++|++++..| .
T Consensus 169 ~~~~i~~lL~~g~IpVi~~~g~~~~G~~~~i~~D~~A~~lA~~L~Ad~Li~lTdV~GV~~~----~~~~~i~~i~~~e~~ 244 (307)
T 3zzh_A 169 TKEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIING----STGEKISMINLDEEY 244 (307)
T ss_dssp CCHHHHHHHHHTCEEEECCCEECTTCBEEBCCHHHHHHHHHHHHCCSEEEEECSSCSCEET----TTTEECCEEEHHHHH
T ss_pred CHHHHHHHHHCCCEEEEeCCeECCCCcEEecCHHHHHHHHHHhCCCCEEEEEeCCcceecC----CCCcCCcccCHHHHH
Confidence 3466778888762 2456789999999999999999999999999999986 4789999999976 5
Q ss_pred HhhhhcCCCCCCCCcchHHHHHHHHHHHc---CCeEEEEeCCChhH-HHHHHcCCccccccccCCC
Q psy11677 81 DTVQFGQKSKVGTGGMDSKVNSATWALDR---GVSVVICNGMQKEA-IKQIVAGRKIGTFFTDASA 142 (462)
Q Consensus 81 ~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~---Gv~v~I~sG~~~~~-L~~~l~g~~~GT~I~~~~~ 142 (462)
..+.. +..++|||.+|++++..|.+. |.+++|++ ++. +.++|+++++||+|.+.++
T Consensus 245 ~~l~~---~~~~tGGM~~Kl~aa~~a~~~v~~g~~v~I~~---~~~ll~elft~~g~GT~I~~~~~ 304 (307)
T 3zzh_A 245 DDLMK---QSWVKYGTKLKIREIKELLDYLPRSSSVAIIN---VQDLQKELFTDSGAGTMIRRGYK 304 (307)
T ss_dssp HHHHT---STTSCHHHHHHHHHHHHHHHHSCTTCCEEEEC---GGGHHHHHHSCCCCSEEEECCC-
T ss_pred HHHHh---CCCCCCcHHHHHHHHHHHHHHhccCeEEEEeC---ccHHHHHHhcCCCCcEEEecCCc
Confidence 66652 357799999999976666654 88999998 666 5889999999999998664
No 34
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=99.64 E-value=8.3e-17 Score=169.69 Aligned_cols=185 Identities=15% Similarity=0.161 Sum_probs=141.5
Q ss_pred HHHHHHhCCchhhcCchhcHHH----------------HHHHHhhccccccccccC-C-----CCCCCCceeeEEEEeCC
Q psy11677 166 SATWALDRGVSVVICNGMQKEA----------------IKQIVAGRKIGTFFTDAS-A-----QSGGTPVEVLAEIWKNE 223 (462)
Q Consensus 166 iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~i~t~~a~~~-d-----~~~~~PlGVi~~IyEsr 223 (462)
+++.|.++.++|..++..|.-. +...+++.+ .+...+ + ..++.|+||+++|++.-
T Consensus 43 ~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N 119 (464)
T 3k9d_A 43 IADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDMK---TIGMLKEDNEKKVMEVAVPLGVVAGLIPST 119 (464)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTCC---CSEEEEEETTTTEEEEEEECCEEEEEECSS
T ss_pred HHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhhhccc---ccceeccCCCceeEEEEecceEEEEECCCc
Confidence 8888888888888877766432 222333333 111111 1 13589999999998763
Q ss_pred CCcccccc------------------cccccchHHHHH----hhcCCC----CeEEeec--CHHHHHHHhcCCCCccEEe
Q psy11677 224 TLNTTVPK------------------KHAKTSQCKYFT----KMLPRY----PLHSQVS--TREEISDLLSMEKHIDLII 275 (462)
Q Consensus 224 ~~Pnv~~~------------------~ea~~sn~~~l~----~al~~~----~~v~~v~--~r~~~~~ll~~~~~iDliI 275 (462)
.|..+.- +++..|+ ..++ +++.++ +++++|+ +++....|++..+ ||+|+
T Consensus 120 -~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~-~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~-vd~I~ 196 (464)
T 3k9d_A 120 -NPTSTVIYKTLISIKAGNSIVFSPHPNALKAI-LETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKD-TAVIL 196 (464)
T ss_dssp -SHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTT-EEEEE
T ss_pred -ChHHHHHHHHHHHHHhCCeEEEECCcchHHHH-HHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCC-CCEEE
Confidence 3864321 7788888 6654 566666 8999998 4788899998764 99999
Q ss_pred ecCChhHHHHHHhhCCCcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCCCCchhHHHHHHhhhcccc--cccCh
Q psy11677 276 PRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGLNPEDRAKAIYNLADQGEM--DVSGL 353 (462)
Q Consensus 276 PrG~~~lv~~v~~~s~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 353 (462)
++||..+++.+.++ .+||+++|.|+|++|||+|||+++|++.++.+|++++|. .|.+.+.++ +.++.
T Consensus 197 fTGs~~v~~~a~~~--~kpvlelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq---------~C~a~~rvlV~~~i~d 265 (464)
T 3k9d_A 197 ATGGSAMVKAAYSS--GTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGT---------ICASEQSVVVERVNKE 265 (464)
T ss_dssp ECSCHHHHHHHTTS--SSCEEEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGC---------STTSCCEEEEEHHHHH
T ss_pred EeCChHHHHHHHhc--CCcEEeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCC---------CCCCCcEEEEeHHHHH
Confidence 99999999988764 699999999999999999999999999999999999999 777777777 66677
Q ss_pred hhHHHHHHhHHHHH
Q psy11677 354 PCLLLFIRLGSLFI 367 (462)
Q Consensus 354 ~~~~~~~~~~~~~~ 367 (462)
+.+.+|.+.+.+|+
T Consensus 266 ~f~~~l~~~~~~~~ 279 (464)
T 3k9d_A 266 AVIAEFRKQGAHFL 279 (464)
T ss_dssp HHHHHHHHTTEEEC
T ss_pred HHHHHHHHhhhhhc
Confidence 77888887776554
No 35
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=99.60 E-value=1e-15 Score=161.25 Aligned_cols=122 Identities=11% Similarity=0.114 Sum_probs=102.4
Q ss_pred HHHhHHHHHHHHh-----------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHH-hH
Q psy11677 13 FLTNFNELFRSIF-----------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSE-MR 80 (462)
Q Consensus 13 ~~~~~~e~~~~~~-----------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~-e~ 80 (462)
-.+.++.+++.+. ..++.++|+|++|+.+|..++||+|+++|||||||++ ++++|++++.. +.
T Consensus 179 ~~~~i~~lL~~g~IpVi~p~g~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~-----~~~lI~~i~~~~e~ 253 (460)
T 3s6g_A 179 HLDLVGSAARAGQAAILACLGETPDGTLVNINADVAVRALVHALQPYKVVFLTGTGGLLDE-----DGDILSSINLATDF 253 (460)
T ss_dssp CCHHHHHHHHTTCEEEEECEEECTTCCEEEECHHHHHHHHHHHHCCSEEEEECSSCSCBCT-----TSSBCCEEEHHHHH
T ss_pred cHHHHHHHHHCCcEEEEECceECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCCccccCC-----CCeecceeCcHHHH
Confidence 3456777777762 3456779999999999999999999999999999985 58999999986 67
Q ss_pred HhhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHH-HHHHcCCccccccccCCC
Q psy11677 81 DTVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAI-KQIVAGRKIGTFFTDASA 142 (462)
Q Consensus 81 ~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L-~~~l~g~~~GT~I~~~~~ 142 (462)
..+.. +..++|||.+|+++|..+.+.+.+++|++|+.|+.| .++|+++++||+|.+.+.
T Consensus 254 ~~l~~---~~~~tGGM~~Kl~aa~~a~~gv~~v~iv~g~~~~~Ll~eLft~~g~GT~i~~~e~ 313 (460)
T 3s6g_A 254 GDLMQ---ADWVNGGMRLKLEEIKRLLDDLPLSSSVSITRPSELARELFTHAGSGTLIRRGER 313 (460)
T ss_dssp HHHHH---CSSSCHHHHHHHHHHHHHHHTSCTTCEEEEECGGGHHHHHHSSCCSSEEEECCCC
T ss_pred HHHHh---cCCCCCcHHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHhcCCCCceEEEcCCc
Confidence 77753 357899999999999998874447999999999985 589999999999998743
No 36
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=99.58 E-value=2.3e-15 Score=149.31 Aligned_cols=105 Identities=28% Similarity=0.329 Sum_probs=87.6
Q ss_pred HHhHHHHHHHHh----------cCCccc-cChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHhHHh
Q psy11677 14 LTNFNELFRSIF----------QKLISI-KDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEMRDT 82 (462)
Q Consensus 14 ~~~~~e~~~~~~----------~~ei~~-gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e~~~ 82 (462)
++.++++++.+. ..+..| .|+|++|+.+|..++||+|+|+|||||||+ ++++|++++..|+.+
T Consensus 162 ~~~i~~lL~~g~IPVi~~v~~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTDVdGV~~------d~~~I~~i~~~e~~~ 235 (279)
T 3l86_A 162 KRVIEEFLENRQIPILASLGYSKEGDMLNINADYLATAVAVALAADKLILMTNVKGVLE------NGAVLEKITSHQVQE 235 (279)
T ss_dssp HHHHHHHHHTTCEEEEESEEECTTSCEEECCHHHHHHHHHHHTTCSEEEEECSSSSCEE------TTEECCEEEGGGSHH
T ss_pred HHHHHHHHhCCcEEEECCcEECCCCCEeecCHHHHHHHHHHHcCCCEEEEEeCCCcccc------CCEehhhccHHHHHH
Confidence 566777777762 112233 499999999999999999999999999995 489999999999888
Q ss_pred hhhcCCCCCCCCcchHHHHHHHHHHHcCC-eEEEEeCCChhHHHHHHcCCcccccccc
Q psy11677 83 VQFGQKSKVGTGGMDSKVNSATWALDRGV-SVVICNGMQKEAIKQIVAGRKIGTFFTD 139 (462)
Q Consensus 83 l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv-~v~I~sG~~~~~L~~~l~g~~~GT~I~~ 139 (462)
++. +.+++|||.+|+++|..|++.|+ +++|+|+..+ ||+|..
T Consensus 236 l~~---~~~~tGGM~~Kl~aa~~a~~~Gv~~v~I~~~~~~------------GT~i~~ 278 (279)
T 3l86_A 236 KID---TAVITAGMIPKIESAAKTVAAGVGQVLIGDNLLT------------GTLITA 278 (279)
T ss_dssp HHH---TTSSCTTHHHHHHHHHHHHHTTCSEEEEESSSSC------------SEEEEC
T ss_pred HHh---CCCCcCcHHHHHHHHHHHHHcCCCEEEEeccCCC------------CeEEec
Confidence 863 35789999999999999999999 5999998643 899864
No 37
>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}
Probab=99.55 E-value=2.6e-15 Score=158.49 Aligned_cols=122 Identities=18% Similarity=0.154 Sum_probs=101.8
Q ss_pred HHHhHHHHHHHHh-----------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHH-hH
Q psy11677 13 FLTNFNELFRSIF-----------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSE-MR 80 (462)
Q Consensus 13 ~~~~~~e~~~~~~-----------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~-e~ 80 (462)
-.+.++.+++.+. ..++.++|+|++|+.+|..++||+|+++|||||||++ ++++|++++.. +.
T Consensus 182 ~~~~i~~lL~~g~IpVi~pvg~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~-----~~~lI~~i~~~~e~ 256 (467)
T 3s6k_A 182 NLAPIEASLQAGSIPVITSLGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDA-----EGKLIDSINLSTEY 256 (467)
T ss_dssp CCHHHHTHHHHTCBCCCCSCCCCSSSCCCBCCHHHHHHHHHHHHCCSSCCCCCSSCSCCCS-----SCCCCCCCCTTTTT
T ss_pred cHHHHHHHHHCCCEEEEECceECCCCcEEecCHHHHHHHHHHhcCCCEEEEEecccceeCC-----CCCCccccChHHHH
Confidence 3456777777762 2356789999999999999999999999999999985 58999999986 66
Q ss_pred HhhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHH-HHHHcCCccccccccCCC
Q psy11677 81 DTVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAI-KQIVAGRKIGTFFTDASA 142 (462)
Q Consensus 81 ~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L-~~~l~g~~~GT~I~~~~~ 142 (462)
..+.. +..++|||.+|+++|..+.+.+.++++++|..|+.| .++|+++++||+|.+.+.
T Consensus 257 ~~l~~---~~~~tGGM~~Kl~aa~~a~~gv~~~~iv~g~~~~~Ll~eLft~~g~GT~i~~~e~ 316 (467)
T 3s6k_A 257 DHLMQ---QPWINGGMRVKIEQIKDLLDRLPLESSVSITRPADLAKELFTHKGSGTLVRRGER 316 (467)
T ss_dssp HHHHT---SSSCCSHHHHHHHHHHHHHTTSCSSCCBCCCCTTTHHHHHHSSCTTSCCBCCCCC
T ss_pred HHHHh---cCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCchHHHHHHhcCCCcceEEeCCCc
Confidence 66653 357899999999999988875448999999999985 578999999999998743
No 38
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=99.54 E-value=8.3e-15 Score=155.00 Aligned_cols=115 Identities=19% Similarity=0.302 Sum_probs=95.9
Q ss_pred hhHHHhHHHHHHHHh----c------C-----CccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCccccc
Q psy11677 11 QHFLTNFNELFRSIF----Q------K-----LISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWT 74 (462)
Q Consensus 11 ~~~~~~~~e~~~~~~----~------~-----ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~ 74 (462)
...++.++.+++.+. . + .+.+|++|++|+.+|..++||.|+++|||||||++||+ +|++++|++
T Consensus 172 ~~~~~~i~~ll~~g~ipVv~G~~g~~~~g~~~~l~rg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dP~~~~~a~~i~~ 251 (473)
T 3c1m_A 172 LEVKERLLPLLKEGIIPVVTGFIGTTEEGYITTLGRGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTARRIPK 251 (473)
T ss_dssp ECHHHHHHHHHHTTCEEEEESSEEEETTSCEEECCTTTHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTCTTCCBCSE
T ss_pred hhhHHHHHHHHhCCcEEEEeCCcccCCCCCEEEeCCCChHHHHHHHHHHcCCCEEEEeeCCCcceeCCCCCCCCCeEecc
Confidence 445566666666651 1 0 13457999999999999999999999999999999998 899999999
Q ss_pred ccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHHcCCccccccccCC
Q psy11677 75 YTSEMRDTVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTDAS 141 (462)
Q Consensus 75 I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~~ 141 (462)
+++.|+.++. ..|.+||.+| ++..|.++|++++|.||+.|+ ..||+|.+..
T Consensus 252 is~~e~~~l~-----~~g~~~m~~~--a~~~a~~~gi~v~I~~~~~~~---------~~GT~i~~~~ 302 (473)
T 3c1m_A 252 LSYIEAMELA-----YFGAKVLHPR--TIEPAMEKGIPILVKNTFEPE---------SEGTLITNDM 302 (473)
T ss_dssp EEHHHHHHHH-----HTTCTTSCGG--GHHHHHHHTCCEEEEETTSTT---------SCCEEEESCC
T ss_pred cCHHHHHHHH-----hcCCcchHHH--HHHHHHHcCCEEEEEecCCCC---------CceEEEeccc
Confidence 9999998875 3566899996 888899999999999999885 6799998753
No 39
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A*
Probab=99.54 E-value=1.4e-14 Score=152.59 Aligned_cols=198 Identities=13% Similarity=0.072 Sum_probs=129.9
Q ss_pred HHHhHHHHHHHHh-----------cCCccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCCCCCCcccccccHHh-H
Q psy11677 13 FLTNFNELFRSIF-----------QKLISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPWEEGAKMIWTYTSEM-R 80 (462)
Q Consensus 13 ~~~~~~e~~~~~~-----------~~ei~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~~p~AklI~~I~~~e-~ 80 (462)
-.+.++.+++.+. ..++.++|+|++|+.+|..|+||+|+++|||||||++ |++++|++++..+ .
T Consensus 169 ~~~~I~~lL~~G~IPVi~~~g~~~~G~~~ni~~D~~Aa~lA~~L~Ad~Li~lTdV~GV~~~----~~~~lI~~it~~e~~ 244 (464)
T 4ab7_A 169 TKEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIING----STGEKISMINLDEEY 244 (464)
T ss_dssp CCHHHHHHHHTTCEEEEESEEECTTCBEEECCHHHHHHHHHHHHCCSEEEEEESSCSEECT----TTCCEECEEEHHHHH
T ss_pred CHHHHHHHHHCCcEEEEcCCcCCCCCCEEEecHHHHHHHHHHHcCCCEEEEEecccccccC----CCCcCCcccCHHHHH
Confidence 4566778888762 3456789999999999999999999999999999986 4789999999976 5
Q ss_pred HhhhhcCCCCCCCCcchHHHHHHHHHHHc---CCeEEEEeCCChhHHHHHHcCCccccccccCCCCCCCCcHHHHHHHHH
Q psy11677 81 DTVQFGQKSKVGTGGMDSKVNSATWALDR---GVSVVICNGMQKEAIKQIVAGRKIGTFFTDASAQSGGTPVEVLAENVN 157 (462)
Q Consensus 81 ~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~---Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~~~~~~~~~~~~ia~~AK 157 (462)
..+.. +..++|||.+|++++..|.+. |.+++|++ ....+.++|+++++||+|.+..+.-..-++..++-..|
T Consensus 245 ~~li~---~~~~tgGM~pKl~aa~aa~~~v~~g~~v~I~~--~~~ll~eLft~~g~GT~I~~~~~~~r~a~~~dv~~~~~ 319 (464)
T 4ab7_A 245 DDLMK---QSWVKYGTKLKIREIKELLDYLPRSSSVAIIN--VQDLQKELFTDSGAGTMIRRGYKLVKRSSIGEFPSADA 319 (464)
T ss_dssp HHHHT---CSSCCHHHHHHHHHHHHHHTTSCTTCEEEEEE--STTHHHHTTSSSTTSEEEECCCCCEEESSGGGSSCHHH
T ss_pred HHHHh---cCCCCCcHHHHHHHHHHHHHhcccCcEEEEec--ChHHHHHHhcCCCCceEEecCccccccCChhhhcCHHH
Confidence 56652 467899999999977766654 78999998 23347788999999999998732100011223211111
Q ss_pred HHHHHHHHHHHHHHhCCchhhcCchhcHHH-HHHHHhhccccccccccCCCCCCCCceeeEEEEeCCCCccc---ccccc
Q psy11677 158 LKMEILVNSATWALDRGVSVVICNGMQKEA-IKQIVAGRKIGTFFTDASAQSGGTPVEVLAEIWKNETLNTT---VPKKH 233 (462)
Q Consensus 158 ~As~~L~~iA~aL~~~~~~IL~AN~~D~~~-~~~~~~~~~i~t~~a~~~d~~~~~PlGVi~~IyEsr~~Pnv---~~~~e 233 (462)
+-+.|....+ + .-+..+++. ++.+-...- .+. +.=|..+++++++.+..|.. ++.++
T Consensus 320 --------L~~lL~~s~~-~-~~~~~~v~~y~~~L~~~~~---~iy------~d~~y~~~AIv~~~~~~~~LdkFav~~~ 380 (464)
T 4ab7_A 320 --------LRKALQRDAG-I-SSGKESVASYLRYLENSDF---VSY------ADEPLEAVAIVKKDTNVPTLDKFVCSDA 380 (464)
T ss_dssp --------HHHHHTTSTT-T-SSSSSCHHHHHHHHHTSCE---EEE------ECTTCSEEEEEECSSSSCEEEEEEECHH
T ss_pred --------HHHHHHhccc-c-cchhhhHHHHHHHhhcCce---EEE------EeCCceEEEEEecCCCCEEEEEEEEccc
Confidence 3344543321 1 122334443 444433222 111 23367888999876633332 23377
Q ss_pred cccch
Q psy11677 234 AKTSQ 238 (462)
Q Consensus 234 a~~sn 238 (462)
+..+|
T Consensus 381 ~~~~g 385 (464)
T 4ab7_A 381 AWLNN 385 (464)
T ss_dssp HHHTT
T ss_pred ccccC
Confidence 77777
No 40
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=99.52 E-value=2.1e-14 Score=149.75 Aligned_cols=94 Identities=23% Similarity=0.262 Sum_probs=82.4
Q ss_pred cccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHH
Q psy11677 30 SIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWALD 108 (462)
Q Consensus 30 ~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~ 108 (462)
.+|++|++|+.+|..|+||+|++||||||||++||+ +|++++|+++++.|+.+++.. |.+..|++++..|.+
T Consensus 150 grg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~el~~~-------Ga~v~~~~a~~~a~~ 222 (421)
T 3ab4_A 150 GRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAV-------GSKILVLRSVEYARA 222 (421)
T ss_dssp --CCHHHHHHHHHHHHTCSEEEEEESCCSCBSSCTTTSTTCCBCSEECHHHHHHHHHT-------TCCSSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCEEEEEECCCccCcCCCCCCCCCeEccccCHHHHHHHHhc-------CCcCchHHHHHHHHH
Confidence 346999999999999999999999999999999998 899999999999999888631 334556779999999
Q ss_pred cCCeEEEEeCCChhHHHHHHcCCccccccccC
Q psy11677 109 RGVSVVICNGMQKEAIKQIVAGRKIGTFFTDA 140 (462)
Q Consensus 109 ~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~ 140 (462)
.|++++|.|+..| +.||+|.++
T Consensus 223 ~gi~v~I~n~~~~----------~~GT~I~~~ 244 (421)
T 3ab4_A 223 FNVPLRVRSSYSN----------DPGTLIAGS 244 (421)
T ss_dssp TTCCEEEEESSSC----------CCCEEECSC
T ss_pred cCCCEEEecCcCC----------CCCeEEEec
Confidence 9999999999887 579999875
No 41
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=99.51 E-value=2e-14 Score=156.10 Aligned_cols=96 Identities=22% Similarity=0.301 Sum_probs=86.2
Q ss_pred ccccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHH
Q psy11677 29 ISIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWAL 107 (462)
Q Consensus 29 i~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~ 107 (462)
+.+|+||++|+.+|..++||+|++||||||||++||+ +|++++|+++++.|+.+++ ..|+|||.+ +++..|.
T Consensus 150 lgrGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~ela-----~~G~~vm~p--~a~~~a~ 222 (600)
T 3l76_A 150 LGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELA-----SLGAKVLHP--RAVEIAR 222 (600)
T ss_dssp CCTTHHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHTG-----GGGTTTCCH--HHHHHHH
T ss_pred CCCCChHHHHHHHHHHcCCCEEEEEECCCcCCCCCCCCCCCCeEeeEEcHHHHHHHH-----hCCCCccHH--HHHHHHH
Confidence 4456799999999999999999999999999999998 8999999999999998875 357899999 7999999
Q ss_pred HcCCeEEEEeCCChhHHHHHHcCCccccccccCC
Q psy11677 108 DRGVSVVICNGMQKEAIKQIVAGRKIGTFFTDAS 141 (462)
Q Consensus 108 ~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~~ 141 (462)
++|++++|.|+..+ ..||+|.+..
T Consensus 223 ~~gipv~I~n~~~~----------~~GT~I~~~~ 246 (600)
T 3l76_A 223 NYGIPLVVRSSWSD----------EPGTKVVAPP 246 (600)
T ss_dssp HHTCCEEEEETTCC----------SCCEEEECCC
T ss_pred HCCCeEEEEECCCC----------CCCeEEecCC
Confidence 99999999999764 4699998654
No 42
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=99.49 E-value=1.3e-14 Score=153.32 Aligned_cols=199 Identities=26% Similarity=0.382 Sum_probs=145.3
Q ss_pred CCc-HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH---------------------HHHH
Q psy11677 146 GTP-VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA---------------------IKQI 191 (462)
Q Consensus 146 ~~~-~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~---------------------~~~~ 191 (462)
+|+ +......||.|.+.+.. +++.|.++.++|.+++..|.-+ ++.+
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~ 91 (468)
T 1vlu_A 12 HMSSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVM 91 (468)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHH
Confidence 344 66666777777654222 8999999999999887766533 3334
Q ss_pred Hhhcccccccccc--------C-----C----CCCCCCceeeEEEEeCCCCcccccc-----------------cccccc
Q psy11677 192 VAGRKIGTFFTDA--------S-----A----QSGGTPVEVLAEIWKNETLNTTVPK-----------------KHAKTS 237 (462)
Q Consensus 192 ~~~~~i~t~~a~~--------~-----d----~~~~~PlGVi~~IyEsr~~Pnv~~~-----------------~ea~~s 237 (462)
++.++ .+... + + ..++.|+||+++|++.. |+.+.. +++-.|
T Consensus 92 a~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN--P~~~~~~~~~ALaaGN~VVlKps~~tp~t 166 (468)
T 1vlu_A 92 LQGIK---DVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR--PEVIANITALSIKSGNAAILKGGKESVNT 166 (468)
T ss_dssp HHHHH---HHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC--THHHHHHHHHHHHHTCEEEEECCGGGHHH
T ss_pred HHHHH---HHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC--hHHHHHHHHHHHHcCCEEEEEcCCccHHH
Confidence 44443 33311 1 0 13478999999999887 853222 677788
Q ss_pred hHHHHHhhc----CC----C----CeEEeecCHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCCCcceeeeccceeEE
Q psy11677 238 QCKYFTKML----PR----Y----PLHSQVSTREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHV 305 (462)
Q Consensus 238 n~~~l~~al----~~----~----~~v~~v~~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~~iPvi~~~~G~ch~ 305 (462)
+ ..|++.+ .+ + +++++|++++.+.+.|..+.+||.|.++||....+.|.+.+ .+||+....|+|++
T Consensus 167 ~-~~l~~l~~~aL~e~~~~aGlP~gvv~vv~~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a-~kpv~lElGGk~p~ 244 (468)
T 1vlu_A 167 F-REMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT-KIPVLGHADGICSI 244 (468)
T ss_dssp H-HHHHHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC-CSCBTTBCSCCEEE
T ss_pred H-HHHHHHHHHHHHhhchhcCCCCCcEEEECCHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc-CCCEEeecCCccce
Confidence 8 7777444 46 4 99999996667888888889999999999999999999999 59999999999999
Q ss_pred EEccCCCHHHHHHHHHcccCCCCCCCCchhHHHHHHhhhcccccccChhhHH
Q psy11677 306 YVDKDADIRKAIKIARSGSRVLQGLNPEDRAKAIYNLADQGEMDVSGLPCLL 357 (462)
Q Consensus 306 yvd~~ad~~~a~~i~~nak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (462)
||++|||+++|++.++++|++++|+ |.+...+..+..| -.+.+.+.
T Consensus 245 iV~~dADl~~Aa~~i~~~~~~n~G~-----C~a~~rvlV~~~i-d~f~~~l~ 290 (468)
T 1vlu_A 245 YLDEDADLIKAKRISLDAKTNYPAG-----CNAMETLLINPKF-SKWWEVLE 290 (468)
T ss_dssp EECTTCCHHHHHHHHHHTTCC---------CCCCEEEEECTTS-TTHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHhcCCCCc-----CCcCcEEEEECCH-HHHHHHHH
Confidence 9999999999999999999998776 6666666666666 44444443
No 43
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=99.48 E-value=4.1e-14 Score=148.75 Aligned_cols=97 Identities=21% Similarity=0.248 Sum_probs=83.0
Q ss_pred cccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHH
Q psy11677 30 SIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWALD 108 (462)
Q Consensus 30 ~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~ 108 (462)
.+|+||+.|+.+|..++||.+++||||||||++||+ +|++++|+++++.|+.+++ ..|.++|.+ +++..|.+
T Consensus 184 ~rGgsD~~Aa~lA~~l~A~~~~i~TDVdGvyt~dP~~~~~a~~i~~is~~e~~ela-----~~Ga~vl~~--~a~~~a~~ 256 (446)
T 3tvi_A 184 SRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTISKISYKELRELS-----YMGATVLHE--EAIFPVKD 256 (446)
T ss_dssp SSSTTHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHTT-----TC----CCS--TTTHHHHH
T ss_pred ccCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCcCCCCeEcceeCHHHHHHHH-----hCCCCcchH--HHHHHHHH
Confidence 346899999999999999999999999999999998 8999999999999998885 246677855 68999999
Q ss_pred cCCeEEEEeCCChhHHHHHHcCCccccccccCCC
Q psy11677 109 RGVSVVICNGMQKEAIKQIVAGRKIGTFFTDASA 142 (462)
Q Consensus 109 ~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~~~ 142 (462)
+|++++|.|+..|+ ..||+|.+...
T Consensus 257 ~~ipi~i~~~~~p~---------~~GT~i~~~~~ 281 (446)
T 3tvi_A 257 SGIPINIKNTNKPS---------DPGTLILSDTH 281 (446)
T ss_dssp SSCCEEEEETTBTT---------SCCEEEECTTT
T ss_pred cCCeEEEecCCCCC---------CCCEEEecCCc
Confidence 99999999999884 57999987643
No 44
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=99.48 E-value=3.7e-14 Score=149.20 Aligned_cols=93 Identities=25% Similarity=0.280 Sum_probs=81.4
Q ss_pred cccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHHhhhhcCCCCCCCCcchHHH---HHHHH
Q psy11677 30 SIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKV---NSATW 105 (462)
Q Consensus 30 ~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl---~AA~~ 105 (462)
.+|+||++|+.+|..++||.|+++|||||||++||+ +|++++|+++++.|+.+++. .| +|+ .++..
T Consensus 197 ~rGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~DPr~~~~a~~i~~is~~e~~ela~-----~G-----~kvlh~~a~~~ 266 (449)
T 2j0w_A 197 GRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMAT-----FG-----AKVLHPATLLP 266 (449)
T ss_dssp CTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHHHHHHHH-----TT-----CTTSCTTTHHH
T ss_pred CCCChHHHHHHHHHHCCCCEEEEccccCCcCcCCCCCCCCCEEccCccHHHHHHHHh-----cC-----CccchHHHHHH
Confidence 346699999999999999999999999999999998 89999999999999988852 12 456 68888
Q ss_pred HHHcCCeEEEEeCCChhHHHHHHcCCccccccccCC
Q psy11677 106 ALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFTDAS 141 (462)
Q Consensus 106 a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~~ 141 (462)
|.+.|++++|.||..|+ ..||+|.+..
T Consensus 267 a~~~gi~v~I~~~~~p~---------~~GT~I~~~~ 293 (449)
T 2j0w_A 267 AVRSDIPVFVGSSKDPR---------AGGTLVCNKT 293 (449)
T ss_dssp HHHHTCCEEEEESSCTT---------SCCEEEESCC
T ss_pred HHHCCCeEEEEECCCCC---------CCeeEEeccc
Confidence 99999999999999885 5799998753
No 45
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=99.48 E-value=4.4e-14 Score=150.75 Aligned_cols=96 Identities=18% Similarity=0.195 Sum_probs=85.6
Q ss_pred cccChHHHHHHHHHHcCCCeEEEEecCcccccCCCC-CCCCcccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHH
Q psy11677 30 SIKDNDSLAAMLAAEIQADLLILMSDVNGIYTKAPW-EEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWALD 108 (462)
Q Consensus 30 ~~gdnD~lAa~lA~~l~Ad~LIiLTDVdGVY~~dP~-~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~ 108 (462)
.+|++|+.|+.+|..++||.|++||||||||++||+ +|++++|+++++.|+.+++. .|.++|.+| ++..|.+
T Consensus 229 grGgsD~tAa~lA~~l~Ad~l~i~TDVdGVytaDPr~v~~A~~I~~Is~~E~~ela~-----~Ga~vmh~~--a~~~a~~ 301 (510)
T 2cdq_A 229 GRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAY-----FGAQVLHPQ--SMRPARE 301 (510)
T ss_dssp CTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEHHHHHHHHH-----HHSSCCCHH--HHHHHHH
T ss_pred CCCChHHHHHHHHHHcCCCEEEEEeCCCCcCCCCCCCCCCCEEecEeCHHHHHHHHh-----cCcchhHHH--HHHHHHH
Confidence 356699999999999999999999999999999998 89999999999999988752 567889886 8888999
Q ss_pred cCCeEEEEeCCChhHHHHHHcCCccccccccCC
Q psy11677 109 RGVSVVICNGMQKEAIKQIVAGRKIGTFFTDAS 141 (462)
Q Consensus 109 ~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~~~~ 141 (462)
+|++++|.|+..|+ ..||+|.+..
T Consensus 302 ~gIpv~I~n~~~p~---------~~GT~I~~~~ 325 (510)
T 2cdq_A 302 GEIPVRVKNSYNPK---------APGTIITKTR 325 (510)
T ss_dssp HTCCEEEEETTSTT---------SCCEEEESCC
T ss_pred CCCeEEEEccCcCC---------CCCeEEeccc
Confidence 99999999999884 5799998753
No 46
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=99.40 E-value=7.8e-14 Score=147.94 Aligned_cols=188 Identities=9% Similarity=0.018 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH---------------HHHHHhhccccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA---------------IKQIVAGRKIGTFF 201 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~---------------~~~~~~~~~i~t~~ 201 (462)
+......||.|.+.+.. +++.|.++.++|.+++..|.-+ ++.++..++ .+
T Consensus 28 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~---~~ 104 (484)
T 3ros_A 28 IDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGP---EM 104 (484)
T ss_dssp HHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---Hh
Confidence 55566667776653222 8999999999999888776532 334443333 22
Q ss_pred cccC----C----CCCCCCceeeEEE--EeCCCCcccccc-----------------cccccchHHHHHhhcCCC----C
Q psy11677 202 TDAS----A----QSGGTPVEVLAEI--WKNETLNTTVPK-----------------KHAKTSQCKYFTKMLPRY----P 250 (462)
Q Consensus 202 a~~~----d----~~~~~PlGVi~~I--yEsr~~Pnv~~~-----------------~ea~~sn~~~l~~al~~~----~ 250 (462)
.... + ...+.|+||+++| |... ++.+.. +++-.|+ ..|++.+.++ +
T Consensus 105 ~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P--~~~~~~~~a~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~aGlP~g 181 (484)
T 3ros_A 105 LKPTKLNSDLGNAYYLKQSTGVIMACEPWNFP--LYQVIRVFAPNFIVGNPILLKHAHNVPGSA-ALTAKIIKRAGAPEG 181 (484)
T ss_dssp TSCEEECCTTSEEEEEEECCCEEEEECCSSST--THHHHHHHHHHHHHTCCEEEECCTTCHHHH-HHHHHHHHHHTCCTT
T ss_pred cCCeeccCCCceeEEEecCCceEEEECCCchH--HHHHHHHHHHHHHcCCEEEEECCCCChHHH-HHHHHHHHHhCcCcC
Confidence 2111 0 1358999999999 5554 443221 6777888 8888776665 8
Q ss_pred eEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCC
Q psy11677 251 LHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVL 327 (462)
Q Consensus 251 ~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~ 327 (462)
++++|+ +.+.+.+|+ .+..||.|.++||...-+.|.+.+. .+||+....|+|++||++|||+++|++.++++|+.+
T Consensus 182 vv~vv~g~~~~~~~L~-~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n 260 (484)
T 3ros_A 182 SLINLYPSYDQLADII-ADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYN 260 (484)
T ss_dssp SEEEECCCHHHHHHHH-TSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGG
T ss_pred eEEEEeCChHHHHHHH-hCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcC
Confidence 999999 577777844 5667999999999998888876652 389999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHhhhccc
Q psy11677 328 QGLNPEDRAKAIYNLADQGE 347 (462)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~ 347 (462)
.|- .|.+...+..++.
T Consensus 261 ~GQ----~C~a~~rvlV~~~ 276 (484)
T 3ros_A 261 DGQ----VCTSSKRIIVEKS 276 (484)
T ss_dssp GGC----CTTSCCEEEEEGG
T ss_pred CCC----CccCCceEEEcHH
Confidence 885 2444444444443
No 47
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=99.38 E-value=3.6e-13 Score=140.56 Aligned_cols=191 Identities=19% Similarity=0.311 Sum_probs=140.9
Q ss_pred CCc-HHHHHHHHHHHHHHHH------------HHHHHHHhCCchhhcCchhcHHH--------------------HHHHH
Q psy11677 146 GTP-VEVLAENVNLKMEILV------------NSATWALDRGVSVVICNGMQKEA--------------------IKQIV 192 (462)
Q Consensus 146 ~~~-~~~ia~~AK~As~~L~------------~iA~aL~~~~~~IL~AN~~D~~~--------------------~~~~~ 192 (462)
+|. +......||.|..... .+++.|.++.++|.+++..|+.+ +..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 344 5556666776655322 19999999999999887776531 34445
Q ss_pred hhccccccccccCC-------------C----CCCCCceeeEEEEeCCCCcccccc-----------------cccccch
Q psy11677 193 AGRKIGTFFTDASA-------------Q----SGGTPVEVLAEIWKNETLNTTVPK-----------------KHAKTSQ 238 (462)
Q Consensus 193 ~~~~i~t~~a~~~d-------------~----~~~~PlGVi~~IyEsr~~Pnv~~~-----------------~ea~~sn 238 (462)
+.++ ..+..++ . .++.|+||+++|+... |+.+.. +.+-.|+
T Consensus 92 ~~l~---~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 92 KACE---TVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHH---HHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHH---HHHhcccccCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 5554 3332211 1 2478999999999754 653222 6667777
Q ss_pred HHHHH----hhcCCC----CeEEeecC--HHHHHHHhcCCCCccEEeecCChhHHHHHHhhCCCcceeeeccceeEEEEc
Q psy11677 239 CKYFT----KMLPRY----PLHSQVST--REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVD 308 (462)
Q Consensus 239 ~~~l~----~al~~~----~~v~~v~~--r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~~iPvi~~~~G~ch~yvd 308 (462)
..|+ ++|.++ +++++|+. ++.+.++|..+..||.|..+||....+.|.+.+ .+||+....|+|++||+
T Consensus 167 -~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a-~~~v~lELGGk~p~iV~ 244 (427)
T 1o20_A 167 -KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA-TVPVLETGVGNCHIFVD 244 (427)
T ss_dssp -HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC-SSCBCCCCCCCEEEEEC
T ss_pred -HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc-CCCEEEecCCCceEEEe
Confidence 7777 455465 89999983 688999999988999999999999999999999 49999999999999999
Q ss_pred cCCCHHHHHHHHHcccCCCCCCCCchhHHHHHHhhhcccc
Q psy11677 309 KDADIRKAIKIARSGSRVLQGLNPEDRAKAIYNLADQGEM 348 (462)
Q Consensus 309 ~~ad~~~a~~i~~nak~~~~~~~~~~~~~~~~~~~~~~~~ 348 (462)
+|||+++|++.++.+|..+.++ |.+...+..++.|
T Consensus 245 ~dADl~~Aa~~i~~~~f~n~G~-----C~a~~rv~V~~~i 279 (427)
T 1o20_A 245 ESADLKKAVPVIINAKTQRPGT-----CNAAEKLLVHEKI 279 (427)
T ss_dssp TTSCHHHHHHHHHHHHHSCTTS-----TTSEEEEEEEHHH
T ss_pred CCCCHHHHHHHHHHHhccCCCC-----CCCccEEEEehhh
Confidence 9999999999999999998766 4444444444443
No 48
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=99.36 E-value=5e-13 Score=141.02 Aligned_cols=190 Identities=31% Similarity=0.488 Sum_probs=137.6
Q ss_pred cHHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHH-------------------HHHHHHhhcc
Q psy11677 148 PVEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKE-------------------AIKQIVAGRK 196 (462)
Q Consensus 148 ~~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~-------------------~~~~~~~~~~ 196 (462)
.+......||.|.+.+.. +++.|.++.++|..++..|.. .+..+++.++
T Consensus 30 ~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~~ev~~~~~~~~ 109 (463)
T 2h5g_A 30 TVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTSKLNSLAIGLR 109 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhHHHHHHHHHHHH
Confidence 366666677776654333 999999999999999877772 1333444444
Q ss_pred cccccccc---------C-----C----CCCCCCceeeEEEEeCCCCcccccc-----------------cccccchHHH
Q psy11677 197 IGTFFTDA---------S-----A----QSGGTPVEVLAEIWKNETLNTTVPK-----------------KHAKTSQCKY 241 (462)
Q Consensus 197 i~t~~a~~---------~-----d----~~~~~PlGVi~~IyEsr~~Pnv~~~-----------------~ea~~sn~~~ 241 (462)
..+.. + . ..++.|+||+++|++++ |..++. +.+-.|+ ..
T Consensus 110 ---~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n--P~n~p~~~a~ALaaGN~VVlKps~~tp~t~-~~ 183 (463)
T 2h5g_A 110 ---QIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR--PDCLPQVAALAIASGNGLLLKGGKEAAHSN-RI 183 (463)
T ss_dssp ---HHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC--TTHHHHHHHHHHHHTCEEEEECCGGGHHHH-HH
T ss_pred ---HHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC--cHHHHHHHHHHHHcCCEEEEECCCCcHHHH-HH
Confidence 22211 0 0 12478999999999997 864322 6777787 77
Q ss_pred HH----hhcCC---CCeEEeecCHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCCCcceeeeccceeEEEEccCCCHH
Q psy11677 242 FT----KMLPR---YPLHSQVSTREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIR 314 (462)
Q Consensus 242 l~----~al~~---~~~v~~v~~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~~iPvi~~~~G~ch~yvd~~ad~~ 314 (462)
|+ ++|.+ .+++++|+....+.+.|-.+..||.|.++||....+.|++.+..+||+....|+|++||++|||++
T Consensus 184 l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aal~pv~lElGGk~p~iV~~dADl~ 263 (463)
T 2h5g_A 184 LHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAKGIPVMGHSEGICHMYVDSEASVD 263 (463)
T ss_dssp HHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCSSSCBCSCSCCCEEEEECTTCCTT
T ss_pred HHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcCCCCEEEecCCcceEEEcCCCCHH
Confidence 77 55442 489999996555667676777899999999999999999987339999999999999999999999
Q ss_pred HHHHHHHcccCCCCCCCCchhHHHHHHhhhcccc
Q psy11677 315 KAIKIARSGSRVLQGLNPEDRAKAIYNLADQGEM 348 (462)
Q Consensus 315 ~a~~i~~nak~~~~~~~~~~~~~~~~~~~~~~~~ 348 (462)
+|++.++++|+.+ | ..|.+...+..|+.|
T Consensus 264 ~Aa~~i~~~~f~n-G----Q~C~a~~rvlV~~~i 292 (463)
T 2h5g_A 264 KVTRLVRDSKCEY-P----AACNALETLLIHRDL 292 (463)
T ss_dssp THHHHHHHHHHSC-T----TSTTSEEEEEEEGGG
T ss_pred HHHHHHHHHhccC-C----CccccCcEEEEeccc
Confidence 9999999999986 3 457776666666666
No 49
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=99.36 E-value=1.9e-13 Score=145.38 Aligned_cols=189 Identities=15% Similarity=0.053 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH---------------HHHHHhhccccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA---------------IKQIVAGRKIGTFF 201 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~---------------~~~~~~~~~i~t~~ 201 (462)
+......||.|.+.+.. +++.|+++.++|..+...|.-+ ++.++..++ .+
T Consensus 52 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~---~~ 128 (497)
T 3k2w_A 52 AENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNAL---TI 128 (497)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTT---TC
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---Hh
Confidence 55666677776654332 8899999998888877666432 334444433 22
Q ss_pred ccc--C--C-----CCCCCCceeeEEEEe-CCCCccc-----------------c-cccccccchHHHHHhhcCCC----
Q psy11677 202 TDA--S--A-----QSGGTPVEVLAEIWK-NETLNTT-----------------V-PKKHAKTSQCKYFTKMLPRY---- 249 (462)
Q Consensus 202 a~~--~--d-----~~~~~PlGVi~~IyE-sr~~Pnv-----------------~-~~~ea~~sn~~~l~~al~~~---- 249 (462)
..- + . ...+.|+||+++|.. .. |-. + +.+++-.|+ ..|++.+.++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~--P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~ll~~aGlP~ 205 (497)
T 3k2w_A 129 EGDILPSDNQDEKIYIHKVPRGVVVGITAWNF--PLALAGRKIGPALITGNTMVLKPTQETPLAT-TELGRIAKEAGLPD 205 (497)
T ss_dssp CEEEEECSSTTEEEEEEEEECSEEEEECCSSS--HHHHHHHHHHHHHHTTCEEEEECCSSSCHHH-HHHHHHHHHTTCCT
T ss_pred cCcccccCCCCcceeEEEcCCceEEEECCCcc--HHHHHHHHHHHHHHcCCEEEEECCCCChHHH-HHHHHHHHHhCcCc
Confidence 211 1 0 124899999999974 33 521 1 117788888 8888777776
Q ss_pred CeEEeecC--HHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccC
Q psy11677 250 PLHSQVST--REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSR 325 (462)
Q Consensus 250 ~~v~~v~~--r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~ 325 (462)
+++++|+. ++....|++ +..||.|.++||....+.|.+.+. .+||+....|+|++||++|||+++|++.++++|+
T Consensus 206 gvv~vv~g~~~~~g~~L~~-~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~ 284 (497)
T 3k2w_A 206 GVLNVINGTGSVVGQTLCE-SPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRF 284 (497)
T ss_dssp TSEEECCSCTTTHHHHHHH-CSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred CeEEEEeCCchHHHHHHHh-CCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHH
Confidence 89999993 445555654 667999999999999999988762 3899999999999999999999999999999999
Q ss_pred CCCCCCCchhHHHHHHhhhcccc
Q psy11677 326 VLQGLNPEDRAKAIYNLADQGEM 348 (462)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~ 348 (462)
++.|- .|.+...+..++.|
T Consensus 285 ~n~GQ----~C~a~~rvlV~~~i 303 (497)
T 3k2w_A 285 ANCGQ----VCTCVERLYVHASV 303 (497)
T ss_dssp GGGGC----STTSEEEEEEETTT
T ss_pred hCCCC----CCcCCcEEEEeHHH
Confidence 99884 24444444444443
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=99.36 E-value=4.4e-13 Score=140.62 Aligned_cols=188 Identities=20% Similarity=0.348 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHH--------------------HHHHHHhhcc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKE--------------------AIKQIVAGRK 196 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~--------------------~~~~~~~~~~ 196 (462)
+......|+.|.+.... +++.|.++.++|.+++..|.. .+..+++.++
T Consensus 28 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~ 107 (444)
T 4ghk_A 28 MTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLR 107 (444)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHH
Confidence 44445566666554333 899999999999988766541 2455555555
Q ss_pred ccccccccCC-----------------CCCCCCceeeEEEEeCCCCcccccc-----------------cccccchHHHH
Q psy11677 197 IGTFFTDASA-----------------QSGGTPVEVLAEIWKNETLNTTVPK-----------------KHAKTSQCKYF 242 (462)
Q Consensus 197 i~t~~a~~~d-----------------~~~~~PlGVi~~IyEsr~~Pnv~~~-----------------~ea~~sn~~~l 242 (462)
.++.+.+ ...+.|+||+++|+... |+.+.. +.+-.|+ ..|
T Consensus 108 ---~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n--P~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l 181 (444)
T 4ghk_A 108 ---QVATLPDPIGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR--PNVTIDAAALCLKSGNATILRGGSEALESN-TAL 181 (444)
T ss_dssp ---HHHHSCCCTTCEEEEEECTTSCEEEEEEEECSEEEEECCSC--HHHHHHHHHHHHHTTCEEEEECCGGGHHHH-HHH
T ss_pred ---HHHhhccccCccCCcccCCCCccceEEEeccEEEEEEeCCC--cHHHHHHHHHHHHcCCEEEEECCccchHHH-HHH
Confidence 4332211 12488999999999876 863222 5666777 777
Q ss_pred Hhh----cCCC----CeEEeec--CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCCCcceeeeccceeEEEEccCCC
Q psy11677 243 TKM----LPRY----PLHSQVS--TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDAD 312 (462)
Q Consensus 243 ~~a----l~~~----~~v~~v~--~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~~iPvi~~~~G~ch~yvd~~ad 312 (462)
++. |.++ +++++|+ +++.+.++|..+..||.|..+||....+.|.+.+ .+||+....|+|++||++|||
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a-~~pv~lELGGk~p~IV~~dAD 260 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA-RVPMIKHLDGICHVYVDDRAS 260 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC-CSCBCCCCCCCCEEEECTTCC
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC-CCCEEEEcCCcCeEEECCCCC
Confidence 744 4555 8999998 4778999999899999999999999999999988 499999999999999999999
Q ss_pred HHHHHHHHHcccCCCCCCCCchhHHHHHHhhhcccc
Q psy11677 313 IRKAIKIARSGSRVLQGLNPEDRAKAIYNLADQGEM 348 (462)
Q Consensus 313 ~~~a~~i~~nak~~~~~~~~~~~~~~~~~~~~~~~~ 348 (462)
+++|++.++.+|..+.|+ |.+...+..++.|
T Consensus 261 l~~Aa~~i~~~~~~n~G~-----C~a~~rvlV~~~i 291 (444)
T 4ghk_A 261 VTKALTVCDNAKTHRYGT-----CNTMETLLVARGI 291 (444)
T ss_dssp HHHHHHHCC--------------CCCCCEEEEEGGG
T ss_pred HHHHHHHHHHHhcCCCcc-----cCcCceEEEeHHH
Confidence 999999999999997765 4444444444444
No 51
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=99.34 E-value=3.2e-12 Score=134.31 Aligned_cols=141 Identities=19% Similarity=0.213 Sum_probs=113.0
Q ss_pred CCCCceeeEEEEeCCCCcccccc------------------cccccchHHHHH----hhcCCC----CeEEeec--CHHH
Q psy11677 209 GGTPVEVLAEIWKNETLNTTVPK------------------KHAKTSQCKYFT----KMLPRY----PLHSQVS--TREE 260 (462)
Q Consensus 209 ~~~PlGVi~~IyEsr~~Pnv~~~------------------~ea~~sn~~~l~----~al~~~----~~v~~v~--~r~~ 260 (462)
++.|+||+++|...- +|-.+.- +.+..|+ ..++ +++.++ +++|+|+ +++.
T Consensus 100 ~~~P~GVv~~I~P~N-~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~-~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~ 177 (452)
T 3my7_A 100 IAEPVGIICGIVPTT-NPTSTAIFKSLISLKTRNGIIFSPHPRAKNST-NDAAKLVLDAAVAAGAPKDIIGWIDQPSVEL 177 (452)
T ss_dssp EEEECCEEEEEECTT-STTHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HHHHHHHHHHHHHTTCCTTSEEECSSCCHHH
T ss_pred EecCceEEEEEcCCC-ChHHHHHHHHHHHHhcCCeEEEEcCCCchHHH-HHHHHHHHHHHHHcCCCcCcEEEEcCCCHHH
Confidence 589999999996543 3753221 5666777 6655 555555 8999998 5788
Q ss_pred HHHHhcCCCCccEEeecCChhHHHHHHhhCCCcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCCCCchhHHHHH
Q psy11677 261 ISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGLNPEDRAKAIY 340 (462)
Q Consensus 261 ~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~~~~~~~~~~~ 340 (462)
...|++..+ ||+|..+||..+++...++ ..||++.+.|+|++||++|||+++|++.++.||+.+.|- .
T Consensus 178 ~~~L~~~p~-v~~V~fTGs~~~~~~a~~~--~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ---------~ 245 (452)
T 3my7_A 178 SNALMKHDD-IALILATGGPGMVKAAYSS--GKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGV---------V 245 (452)
T ss_dssp HHHHHHCTT-CCEEEECSCHHHHHHHHTS--SSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGC---------C
T ss_pred HHHHHhCCC-ccEEEEECcHHHHHHHHhc--CCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCC---------c
Confidence 888888654 9999999999999988764 699999999999999999999999999999999999998 7
Q ss_pred Hhhhcccc--cccChhhHHHHHHhH
Q psy11677 341 NLADQGEM--DVSGLPCLLLFIRLG 363 (462)
Q Consensus 341 ~~~~~~~~--~~~~~~~~~~~~~~~ 363 (462)
|.+.|.++ +.++.+.+.+|.+.+
T Consensus 246 C~a~~rv~V~~~i~d~f~~~l~~~~ 270 (452)
T 3my7_A 246 CASEQAVIVVDEVYDEVKERFASHK 270 (452)
T ss_dssp TTCEEEEEEEGGGHHHHHHHHHTTT
T ss_pred cCCCcEEEEcHHHHHHHHHHHHHhC
Confidence 88888877 667777888887764
No 52
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=99.34 E-value=2.9e-13 Score=144.30 Aligned_cols=175 Identities=13% Similarity=0.048 Sum_probs=129.5
Q ss_pred HHHHHHHHHhCCchhhcCchhcHHH---------------HHHHHhhcccccccccc--CC------CCCC-CCceeeEE
Q psy11677 163 LVNSATWALDRGVSVVICNGMQKEA---------------IKQIVAGRKIGTFFTDA--SA------QSGG-TPVEVLAE 218 (462)
Q Consensus 163 L~~iA~aL~~~~~~IL~AN~~D~~~---------------~~~~~~~~~i~t~~a~~--~d------~~~~-~PlGVi~~ 218 (462)
|..+++.|.++.++|..++..|.-+ ++.++...+ .+... +. ..++ .|+||+++
T Consensus 77 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~P~GVV~~ 153 (506)
T 3rh9_A 77 LEDIRDGLKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHIS---ALDSHTIPEKPKDCTWTVHYRPVGVTGL 153 (506)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGG---GGCCEECSCCGGGCEEEEEEEECCSEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---HhcCcccccCCCceeeEeecccceEEEE
Confidence 3338999999999999888777532 344444333 32211 10 1247 99999999
Q ss_pred E--EeCCCCcccccc-----------------cccccchHHHHHhhcCCC----CeEEeecC--HHHHHHHhcCCCCccE
Q psy11677 219 I--WKNETLNTTVPK-----------------KHAKTSQCKYFTKMLPRY----PLHSQVST--REEISDLLSMEKHIDL 273 (462)
Q Consensus 219 I--yEsr~~Pnv~~~-----------------~ea~~sn~~~l~~al~~~----~~v~~v~~--r~~~~~ll~~~~~iDl 273 (462)
| |... ++.+.. +++-.|+ ..|++.+.++ +++++|+. ++....|++ +..||.
T Consensus 154 I~PwN~P--~~~~~~~~a~ALaaGN~VVlKps~~tp~t~-~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~-~p~vd~ 229 (506)
T 3rh9_A 154 IVPWNFP--IGMIAKKLSAALAAGCPSVIKPASETPLTM-IAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCE-HKDVPM 229 (506)
T ss_dssp ECCSSST--THHHHHHHHHHHHHTCCEEEECCTTSCHHH-HHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHH-CTTCCE
T ss_pred ECCCchH--HHHHHHHHHHHHHcCCEEEEEcCCccHHHH-HHHHHHHHHhCcChhhEEEEeCCChHHHHHHHh-CCCCCE
Confidence 9 6554 443221 7778888 8888888887 89999994 455566776 556999
Q ss_pred EeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCCCCchhHHHHHHhhhcccc
Q psy11677 274 IIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGLNPEDRAKAIYNLADQGEM 348 (462)
Q Consensus 274 iIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~~~~~~~~~~~~~~~~~~~ 348 (462)
|.++||....+.|.+.+. .+||+....|+|++||++|||+++|++.++++|.++.|- .|.+...+..++.|
T Consensus 230 I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ----~C~a~~rvlV~~~i 302 (506)
T 3rh9_A 230 LSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQ----TCVCANRIFVHEKV 302 (506)
T ss_dssp EEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGC----SSSSCCEEEEETTT
T ss_pred EEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCC----CcccCcEEEEcHHH
Confidence 999999999999998872 489999999999999999999999999999999998885 24444444444443
No 53
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=99.32 E-value=2.7e-13 Score=145.06 Aligned_cols=175 Identities=12% Similarity=0.068 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhccccccccccCC--
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDASA-- 206 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~~d-- 206 (462)
+......||.|.+.... +++.|+++.++|.++...|.-+ +...++.++ ..+.+.+
T Consensus 66 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~---~~a~~~~~~ 142 (521)
T 4e4g_A 66 LAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCE---FVIGIPHLQ 142 (521)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHH---HHHTHHHHT
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHHh
Confidence 55556667776654322 8899999999998888776532 444444444 3332211
Q ss_pred --------------CCCCCCceeeEEE--EeCCCCccccc-----------------ccccccchHHHHHhhcCCC----
Q psy11677 207 --------------QSGGTPVEVLAEI--WKNETLNTTVP-----------------KKHAKTSQCKYFTKMLPRY---- 249 (462)
Q Consensus 207 --------------~~~~~PlGVi~~I--yEsr~~Pnv~~-----------------~~ea~~sn~~~l~~al~~~---- 249 (462)
..++.|+||+++| |... ...+. .+.+-.|+ ..|++.+.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P--~~~~~~~~a~ALaaGN~VVlKpse~tp~t~-~~l~~l~~eaGlP~ 219 (521)
T 4e4g_A 143 KSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFP--GMIPMWMFAPAIACGNAFILKPSERDPSVP-IRLAELMIEAGLPA 219 (521)
T ss_dssp CEEEEEEEETTEEEEEEEEECCEEEEECCSSCT--THHHHHHHHHHHHTTCEEEEECCTTSTHHH-HHHHHHHHHTTCCT
T ss_pred cCcccccCCCCcceeEEEcCCcEEEEECCCcch--HHHHHHHHHHHHHcCCEEEEECCCcchHHH-HHHHHHHHHhCCCc
Confidence 1358999999999 5444 33211 16777888 7888777776
Q ss_pred CeEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCC
Q psy11677 250 PLHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRV 326 (462)
Q Consensus 250 ~~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~ 326 (462)
+++++|+ +++....|++ +..||.|..+||....+.|.+.+. .+||+....|+|++||++|||+++|++.++.+|..
T Consensus 220 gvv~vv~g~~~~~~~L~~-~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~ 298 (521)
T 4e4g_A 220 GILNVVNGDKGAVDAILT-HPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYG 298 (521)
T ss_dssp TSEEECCCCHHHHHHHHT-CTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHG
T ss_pred CeEEEEeCChHHHHHHHh-CCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHh
Confidence 8999999 6777777776 456999999999999999987652 49999999999999999999999999999999999
Q ss_pred CCCC
Q psy11677 327 LQGL 330 (462)
Q Consensus 327 ~~~~ 330 (462)
+.|-
T Consensus 299 n~GQ 302 (521)
T 4e4g_A 299 SAGE 302 (521)
T ss_dssp GGGC
T ss_pred CCCC
Confidence 8774
No 54
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=99.32 E-value=2.6e-13 Score=145.00 Aligned_cols=189 Identities=16% Similarity=0.122 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH------HHHHHhhcccccccccc------
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA------IKQIVAGRKIGTFFTDA------ 204 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~------~~~~~~~~~i~t~~a~~------ 204 (462)
+......|+.|.+.... +++.|+++.++|.+++..|.-+ +..+++.++ ..+..
T Consensus 54 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~eaev~~~~~~~~---~~a~~~~~~~~ 130 (517)
T 3r31_A 54 VERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGAD---AFEFFGGIAPS 130 (517)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHSHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH---HHHHHhhhccc
Confidence 55556667776654333 8999999999998887776532 222222222 11111
Q ss_pred ----------C--CCCCCCCceeeEEE--EeCCCCccccc-----------------ccccccchHHHHHhhcCCC----
Q psy11677 205 ----------S--AQSGGTPVEVLAEI--WKNETLNTTVP-----------------KKHAKTSQCKYFTKMLPRY---- 249 (462)
Q Consensus 205 ----------~--d~~~~~PlGVi~~I--yEsr~~Pnv~~-----------------~~ea~~sn~~~l~~al~~~---- 249 (462)
+ -...+.|+||+++| |... ++.+. .+++-.|+ ..|++.+.++
T Consensus 131 ~~~g~~~~~~~~~~~~~~~P~GVV~~I~PwN~P--~~~~~~~~a~ALaaGN~VVlKps~~tp~t~-~~l~~ll~eaGlP~ 207 (517)
T 3r31_A 131 ALNGDYIPLGGDFAYTKRVPLGVCVGIGAWNYP--QQIACWKAAPALVAGNAMVFKPSENTPLGA-LKIAEILIEAGLPK 207 (517)
T ss_dssp HTCCCEEECSSSEEEEEEEECSEEEEECCSSSH--HHHHHHHHHHHHHTTCEEEEECCTTSCSHH-HHHHHHHHHTTCCT
T ss_pred cccCcccccCCCcceEEEcCccEEEEECCCcch--HHHHHHHHHHHHHcCCEEEEEcCcccHHHH-HHHHHHHHHhCcCc
Confidence 0 02357899999999 4333 33211 17778888 8888777776
Q ss_pred CeEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhC--CCcceeeeccceeEEEEccCCCHHHHHHHHHcccCC
Q psy11677 250 PLHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS--QHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRV 326 (462)
Q Consensus 250 ~~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s--~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~ 326 (462)
+++++|+ +++....|++ +..||.|..+||...-+.|.+.+ +.+||+....|+|++||++|||+++|++.++.+|+.
T Consensus 208 gvv~vv~g~~~~g~~L~~-~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~ 286 (517)
T 3r31_A 208 GLFNVIQGDRDTGPLLVN-HPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFY 286 (517)
T ss_dssp TSEEECCCCTTHHHHHHT-CTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTS
T ss_pred ccEEEEECCHHHHHHHHh-CCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhc
Confidence 8999999 5666666665 56699999999998888887765 249999999999999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHhhhcccc
Q psy11677 327 LQGLNPEDRAKAIYNLADQGEM 348 (462)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~ 348 (462)
+.|- .|.+...+..|+.|
T Consensus 287 n~GQ----~C~a~~rvlV~~~i 304 (517)
T 3r31_A 287 SSGQ----VCSNGTRVFVQKKA 304 (517)
T ss_dssp CCHH----HHTTCEEEEEEGGG
T ss_pred CCCc----eeccCceEEEeHHH
Confidence 7776 45555555544443
No 55
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=99.31 E-value=9.8e-13 Score=138.39 Aligned_cols=176 Identities=16% Similarity=0.141 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHH------------HHHHHHHHHhCCchhhcCchhcHHH----------------HHHHHhhcccccc
Q psy11677 149 VEVLAENVNLKMEI------------LVNSATWALDRGVSVVICNGMQKEA----------------IKQIVAGRKIGTF 200 (462)
Q Consensus 149 ~~~ia~~AK~As~~------------L~~iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~i~t~ 200 (462)
+......||.|... |..+++.|+++.++|..++..|.-+ ++.+++.++ .
T Consensus 30 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~---~ 106 (457)
T 3lns_A 30 IDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLD---E 106 (457)
T ss_dssp HHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 44555556655443 2228899999999998887766432 333444333 2
Q ss_pred ccc---cC------C---CCCCCCceeeEEEEeCCCCccccc-----------------ccccccchHHHHHhhcCCC--
Q psy11677 201 FTD---AS------A---QSGGTPVEVLAEIWKNETLNTTVP-----------------KKHAKTSQCKYFTKMLPRY-- 249 (462)
Q Consensus 201 ~a~---~~------d---~~~~~PlGVi~~IyEsr~~Pnv~~-----------------~~ea~~sn~~~l~~al~~~-- 249 (462)
+.. .+ . ..++.|+||+++|++.--+++.+. .+++-.|+ ..|++.+.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~alP 185 (457)
T 3lns_A 107 WVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETS-AVIEKIIAEAFA 185 (457)
T ss_dssp HTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHH-HHHHHHHHHHCC
T ss_pred hhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHH-HHHHHHHHHhCC
Confidence 221 00 0 135899999999987331132211 16777788 7777555444
Q ss_pred -CeEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccC
Q psy11677 250 -PLHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSR 325 (462)
Q Consensus 250 -~~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~ 325 (462)
+++++|+ +++....|++ . .||.|.++||...-+.|.+.+. .+||+....|+|++||++|||+++|++.++++|+
T Consensus 186 ~gvv~vv~g~~~~~~~L~~-~-~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~ 263 (457)
T 3lns_A 186 PEYVAVIQGGRDENSHLLS-L-PFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF 263 (457)
T ss_dssp TTTEEECCCCHHHHHHHTT-S-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HhhEEEecCCHHHHHHHhc-C-CCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHH
Confidence 9999999 6888888887 4 6999999999999999877652 4899999999999999999999999999999999
Q ss_pred CCCCC
Q psy11677 326 VLQGL 330 (462)
Q Consensus 326 ~~~~~ 330 (462)
.+.|-
T Consensus 264 ~n~GQ 268 (457)
T 3lns_A 264 INSGQ 268 (457)
T ss_dssp GGGGC
T ss_pred HhCCC
Confidence 99885
No 56
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=99.30 E-value=7.2e-13 Score=140.47 Aligned_cols=174 Identities=13% Similarity=0.107 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH----------------HHHHHhhcccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA----------------IKQIVAGRKIGTF 200 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~i~t~ 200 (462)
+......||+|.+.+.. +++.|.++.++|.+++..|.-+ ++.+++.++ .
T Consensus 46 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~---~ 122 (490)
T 2ve5_A 46 VERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVP---A 122 (490)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGG---G
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHH---H
Confidence 55666777777664333 8899999999998887766532 344444433 2
Q ss_pred ccccCC--------CCCCCCceeeEEEEeCCCCcccc---------------------cccccccchHHHHHhhcCCC--
Q psy11677 201 FTDASA--------QSGGTPVEVLAEIWKNETLNTTV---------------------PKKHAKTSQCKYFTKMLPRY-- 249 (462)
Q Consensus 201 ~a~~~d--------~~~~~PlGVi~~IyEsr~~Pnv~---------------------~~~ea~~sn~~~l~~al~~~-- 249 (462)
+..... ...+.|+||+++|- . +|.- +.+++-+|+ ..|++.+.++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~--p--wN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~-~~l~~l~~~aGl 197 (490)
T 2ve5_A 123 IEGEQIPLRETSFVYTRREPLGVVAGIG--A--WNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA-LKLAEIYTEAGV 197 (490)
T ss_dssp CCEEEEEEETTEEEEEEEEECSEEEEEC--C--SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHH-HHHHHHHHHHTC
T ss_pred hcCccccCCCCceeeEeeccccEEEEEC--C--CcchHHHHHHHHHHHHHcCCEEEEECCCcchHHH-HHHHHHHHHhCc
Confidence 221110 13488999999993 2 3421 117777888 8888766665
Q ss_pred --CeEEeecC-HHHHHHHhcCCCCccEEeecCChhHHHHHHhhC---CCcceeeeccceeEEEEccCCCHHHHHHHHHcc
Q psy11677 250 --PLHSQVST-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS---QHIPVLGHAEGICHVYVDKDADIRKAIKIARSG 323 (462)
Q Consensus 250 --~~v~~v~~-r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s---~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~na 323 (462)
+++++|+. ...+.+.|-.+..||.|+++||....+.|.+.+ +..||.....|+|++||++|||+++|++.++++
T Consensus 198 P~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~ 277 (490)
T 2ve5_A 198 PDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMA 277 (490)
T ss_dssp CTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred CcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHH
Confidence 89999994 444555555567799999999999999998776 148999999999999999999999999999999
Q ss_pred cCCCCCC
Q psy11677 324 SRVLQGL 330 (462)
Q Consensus 324 k~~~~~~ 330 (462)
|+++.|-
T Consensus 278 ~~~n~GQ 284 (490)
T 2ve5_A 278 NFFSSGQ 284 (490)
T ss_dssp HHGGGGC
T ss_pred HHhcCCC
Confidence 9999884
No 57
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=99.30 E-value=8.3e-13 Score=140.75 Aligned_cols=176 Identities=18% Similarity=0.116 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH---------------HHHHHhhccccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA---------------IKQIVAGRKIGTFF 201 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~---------------~~~~~~~~~i~t~~ 201 (462)
+......|+.|.+.... +++.|+++.++|..+...|.-+ ++..+...+ .+
T Consensus 51 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~---~~ 127 (505)
T 3prl_A 51 VNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEAL---RL 127 (505)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH---TC
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---Hh
Confidence 55556666666553222 8999999999999888777532 333333222 11
Q ss_pred cc----c---C----C---CCCCCCceeeEEE--EeCCCCcccccc-----------------cccccchHHHHHhhcCC
Q psy11677 202 TD----A---S----A---QSGGTPVEVLAEI--WKNETLNTTVPK-----------------KHAKTSQCKYFTKMLPR 248 (462)
Q Consensus 202 a~----~---~----d---~~~~~PlGVi~~I--yEsr~~Pnv~~~-----------------~ea~~sn~~~l~~al~~ 248 (462)
.. . + . ...+.|+||+++| |... ++.+.. +.+-.|+ ..|++.+.+
T Consensus 128 ~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P--~~~~~~~~a~ALaaGN~VVlKpse~tp~ta-~~l~~ll~e 204 (505)
T 3prl_A 128 NGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYP--VNLAAAKIAPALVTGNTVVFKPATQGSLSG-IKMVEALAD 204 (505)
T ss_dssp CEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSST--THHHHHHHHHHHHTTCEEEEEECSTTHHHH-HHHHHHHHH
T ss_pred cCccccccccccccCCceeEEEEcCCcEEEEECCCccH--HHHHHHHHHHHHHcCCEEEEECCCCChHHH-HHHHHHHHH
Confidence 11 0 1 0 1237899999999 6555 443211 6777788 888888877
Q ss_pred C----CeEEeecC-HHHHHHHhcCCCCccEEeecCChhHHHHHHhhCCCcceeeeccceeEEEEccCCCHHHHHHHHHcc
Q psy11677 249 Y----PLHSQVST-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARSG 323 (462)
Q Consensus 249 ~----~~v~~v~~-r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~na 323 (462)
+ +++++|+. ...+.+.|-.+..||.|..+||....+.|.+.+..+||+....|+|++||++|||+++|++.++.+
T Consensus 205 aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~ 284 (505)
T 3prl_A 205 AGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSG 284 (505)
T ss_dssp TTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCCSSCEEEECCCCEEEEECTTCCHHHHHHHHHHH
T ss_pred hCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHccCCcEEEECCCCCCCccCCCCCHHHHHHHHHHH
Confidence 6 89999994 556655555566799999999999999999988448999999999999999999999999999999
Q ss_pred cCCCCCC
Q psy11677 324 SRVLQGL 330 (462)
Q Consensus 324 k~~~~~~ 330 (462)
|+.+.|-
T Consensus 285 ~~~n~GQ 291 (505)
T 3prl_A 285 AFSYSGQ 291 (505)
T ss_dssp HHGGGGC
T ss_pred HHhcCCC
Confidence 9998887
No 58
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=99.27 E-value=1e-12 Score=139.44 Aligned_cols=180 Identities=10% Similarity=0.056 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHHH------------HHHHHHHhCCchhhcCchhcHHH---------------HHHHHhhcc--ccc
Q psy11677 149 VEVLAENVNLKMEILV------------NSATWALDRGVSVVICNGMQKEA---------------IKQIVAGRK--IGT 199 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~------------~iA~aL~~~~~~IL~AN~~D~~~---------------~~~~~~~~~--i~t 199 (462)
+......||.|.+.+. .+++.|.++.++|.+++..|.-+ ++.++..++ .|.
T Consensus 50 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~ 129 (487)
T 2w8n_A 50 ARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGD 129 (487)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCE
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 5555566666654322 18999999999999888776532 333333322 011
Q ss_pred cccc-cCC---CCCCCCceeeEEEEeCCCCc-cccc-----------------ccccccchHHHHHhhcCCC----CeEE
Q psy11677 200 FFTD-ASA---QSGGTPVEVLAEIWKNETLN-TTVP-----------------KKHAKTSQCKYFTKMLPRY----PLHS 253 (462)
Q Consensus 200 ~~a~-~~d---~~~~~PlGVi~~IyEsr~~P-nv~~-----------------~~ea~~sn~~~l~~al~~~----~~v~ 253 (462)
.+.. .+. ..++.|+||+++|++.- .| +.+. .+.+-.|+ ..|++.+.++ ++++
T Consensus 130 ~~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~aGlP~gvv~ 207 (487)
T 2w8n_A 130 IIHTPAKDRRALVLKQPIGVAAVITPWN-FPSAMITRKVGAALAAGCTVVVKPAEDTPFSA-LALAELASQAGIPSGVYN 207 (487)
T ss_dssp EECCSCTTCEEEEEEEECCEEEEECCSS-STTHHHHHHHHHHHHHTCEEEEECCTTCCHHH-HHHHHHHHHHTCCTTSEE
T ss_pred ccccCCCCceeEEEEecceEEEEECCCc-chHHHHHHHHHHHHHcCCEEEEECCCcchHHH-HHHHHHHHHhCCCCCeEE
Confidence 1100 010 12478999999998764 24 2211 16777888 7888777665 8999
Q ss_pred eec---C-HHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCC
Q psy11677 254 QVS---T-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVL 327 (462)
Q Consensus 254 ~v~---~-r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~ 327 (462)
+|+ . -..+.+.|-.+..||.|..+||....+.|.+.+. .+||+.+..|+|++||++|||+++|++.++++|+.+
T Consensus 208 vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n 287 (487)
T 2w8n_A 208 VIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRN 287 (487)
T ss_dssp ECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCC
T ss_pred EEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhC
Confidence 998 3 2335554545678999999999999988877651 499999999999999999999999999999999998
Q ss_pred CCC
Q psy11677 328 QGL 330 (462)
Q Consensus 328 ~~~ 330 (462)
.|-
T Consensus 288 ~GQ 290 (487)
T 2w8n_A 288 TGQ 290 (487)
T ss_dssp CSC
T ss_pred CCC
Confidence 885
No 59
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=99.26 E-value=5.3e-12 Score=133.98 Aligned_cols=177 Identities=14% Similarity=0.055 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhcc---------ccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRK---------IGT 199 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~---------i~t 199 (462)
+......||.|.+.+.. +++.|+++.++|..+...|.-+ +...++.++ -|.
T Consensus 44 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~ 123 (490)
T 3ju8_A 44 VDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGE 123 (490)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 55666677776654333 8899999999998888776532 222222222 000
Q ss_pred cccccCC---CCCCCCceeeEEEE--eCCCCccccc-----------------ccccccchHHHHHhhcCCC----CeEE
Q psy11677 200 FFTDASA---QSGGTPVEVLAEIW--KNETLNTTVP-----------------KKHAKTSQCKYFTKMLPRY----PLHS 253 (462)
Q Consensus 200 ~~a~~~d---~~~~~PlGVi~~Iy--Esr~~Pnv~~-----------------~~ea~~sn~~~l~~al~~~----~~v~ 253 (462)
.....+. ...+.|+||+++|. ... ...+. .+.+-.|+ ..|++.+.++ ++++
T Consensus 124 ~~~~~~~~~~~~~~~P~GVv~~I~PwN~P--~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~aGlP~gvv~ 200 (490)
T 3ju8_A 124 KSGPLADATAVLRHKPHGVVAVFGPYNFP--GHLPNGHIVPALLAGNCVVFKPSELTPKVA-ELTLKAWIQAGLPAGVLN 200 (490)
T ss_dssp EEEEETTEEEEEEEEECSEEEEECCSSST--THHHHHHHHHHHHHTCEEEEECCTTCHHHH-HHHHHHHHHTTCCTTTEE
T ss_pred ccccCCCCeeeEEECCCCEEEEECCCcch--HHHHHHHHHHHHHcCCeEEEECCCCCcHHH-HHHHHHHHHhCcCcCeEE
Confidence 0000111 12378999999994 333 33211 16677787 7777777766 8999
Q ss_pred eec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--Ccce--eeeccceeEEEEccCCCHHHHHHHHHcccCCCC
Q psy11677 254 QVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPV--LGHAEGICHVYVDKDADIRKAIKIARSGSRVLQ 328 (462)
Q Consensus 254 ~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPv--i~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~ 328 (462)
+|+ +++....|++ +..||.|..+||....+.|.+.+. ..|| ++.| |+|++||++|||+++|++.++.+|+.+.
T Consensus 201 vv~g~~~~~~~L~~-~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElG-Gk~p~iV~~dADl~~Aa~~i~~~~~~n~ 278 (490)
T 3ju8_A 201 LVQGGRETGVALAA-HRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMG-GNNPLVVEEVADLDAAVYTIIQSAFISA 278 (490)
T ss_dssp ECCCSHHHHHHHHT-CTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECC-CCEEEEECCCSCHHHHHHHHHHHHHGGG
T ss_pred EEeCCHHHHHHHHh-CCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecC-CCCeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 999 5666666775 556999999999999999998652 3786 6676 9999999999999999999999999998
Q ss_pred CC
Q psy11677 329 GL 330 (462)
Q Consensus 329 ~~ 330 (462)
|-
T Consensus 279 GQ 280 (490)
T 3ju8_A 279 GQ 280 (490)
T ss_dssp GC
T ss_pred CC
Confidence 85
No 60
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=99.26 E-value=2.6e-12 Score=136.56 Aligned_cols=190 Identities=12% Similarity=0.066 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH----------------HHHHHhhcccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA----------------IKQIVAGRKIGTF 200 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~i~t~ 200 (462)
+......||.|.+.+.. +++.|.++.++|.+++..|.-+ ++.++..++ +
T Consensus 62 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~---~ 138 (495)
T 1wnd_A 62 VDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAAR---C 138 (495)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTT---C
T ss_pred HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 55556666766553221 8999999999998877766422 344444433 2
Q ss_pred cccc------CC---CCCCCCceeeEEEEeCCCCcc-c----------------c-cccccccchHHHHHhhcCCC---C
Q psy11677 201 FTDA------SA---QSGGTPVEVLAEIWKNETLNT-T----------------V-PKKHAKTSQCKYFTKMLPRY---P 250 (462)
Q Consensus 201 ~a~~------~d---~~~~~PlGVi~~IyEsr~~Pn-v----------------~-~~~ea~~sn~~~l~~al~~~---~ 250 (462)
+..- +. ..++.|+||+++|++.. .|- . + +.+.+-.|+ ..|++.+.++ +
T Consensus 139 ~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~-~~l~~l~~ealP~g 216 (495)
T 1wnd_A 139 LNGLAAGEYLEGHTSMIRRDPLGVVASIAPWN-YPLMMAAWKLAPALAAGNCVVLKPSEITPLTA-LKLAELAKDIFPAG 216 (495)
T ss_dssp CEEECBEEEETTEEEEEEEEECSEEEEECCSS-SHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH-HHHHHHHTTTSCTT
T ss_pred hcCccccCCCCCceeEEeeecCCeEEEECCCc-chHHHHHHHHHHHHHcCCeeEeeCCCCChHHH-HHHHHHHHHhCCcC
Confidence 2111 11 12478999999999766 462 1 1 117778888 8888777776 9
Q ss_pred eEEeec--CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCC
Q psy11677 251 LHSQVS--TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRV 326 (462)
Q Consensus 251 ~v~~v~--~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~ 326 (462)
++++|+ +++....|++ +..||.|..+||....+.|.+.+. .+||+....|+|++||++|||+++|++.++++|..
T Consensus 217 vv~vv~g~~~~~g~~L~~-~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~ 295 (495)
T 1wnd_A 217 VVNILFGRGKTVGDPLTG-HPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYY 295 (495)
T ss_dssp SEEECCCCTTTTHHHHHT-CTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTG
T ss_pred eEEEEeCCCHHHHHHHHh-CCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHh
Confidence 999998 3566667776 567999999999999999988762 49999999999999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHhhhcccc
Q psy11677 327 LQGLNPEDRAKAIYNLADQGEM 348 (462)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~ 348 (462)
+.|= .|.+...+..|..|
T Consensus 296 n~GQ----~C~a~~rvlV~~~i 313 (495)
T 1wnd_A 296 NAGQ----DCTAACRIYAQKGI 313 (495)
T ss_dssp GGGC----STTCCCEEEEETTT
T ss_pred cCCC----CCCCCcEEEecchh
Confidence 8874 34444444444443
No 61
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=99.25 E-value=1.2e-12 Score=139.76 Aligned_cols=176 Identities=14% Similarity=0.030 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH---------------HHHHHhhccccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA---------------IKQIVAGRKIGTFF 201 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~---------------~~~~~~~~~i~t~~ 201 (462)
+......|+.|.+.+.. +++.|.++.++|.+....|.-+ ++.++..++ ++
T Consensus 76 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~---~~ 152 (516)
T 1uzb_A 76 AEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAAL---RY 152 (516)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHG---GG
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---Hh
Confidence 55556666766553221 8999999999998887766432 444444444 33
Q ss_pred ccc-------CC---CCCCCCceeeEEEEeCCCCc-cccc-----------------ccccccchHHHHHhhcCCC----
Q psy11677 202 TDA-------SA---QSGGTPVEVLAEIWKNETLN-TTVP-----------------KKHAKTSQCKYFTKMLPRY---- 249 (462)
Q Consensus 202 a~~-------~d---~~~~~PlGVi~~IyEsr~~P-nv~~-----------------~~ea~~sn~~~l~~al~~~---- 249 (462)
..- +. ..++.|+||+++|++.. .| ..+. .+.+-.|+ ..|++.+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta-~~l~~l~~eaGlP~ 230 (516)
T 1uzb_A 153 RYPAVEVVPYPGEDNESFYVPLGAGVVIAPWN-FPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVG-AKVFEIFHEAGFPP 230 (516)
T ss_dssp CSSCCCCCCCTTEEEEEEEEECCEEEEECCSS-STTHHHHHHHHHHHHTTCEEEEECCGGGHHHH-HHHHHHHHHHTCCT
T ss_pred cCCcccccCCCCceEEEEEeccceEEEECCCc-cHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHH-HHHHHHHHHhCCCc
Confidence 221 10 12478999999998765 37 2111 16667777 7777666665
Q ss_pred CeEEeecC--HHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--------CcceeeeccceeEEEEccCCCHHHHHHH
Q psy11677 250 PLHSQVST--REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--------HIPVLGHAEGICHVYVDKDADIRKAIKI 319 (462)
Q Consensus 250 ~~v~~v~~--r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--------~iPvi~~~~G~ch~yvd~~ad~~~a~~i 319 (462)
+++++|+. ++....|++ +..||.|..+||....+.|.+.+. .+||+....|+|++||++|||+++|++.
T Consensus 231 gvv~vv~g~~~~~~~~L~~-~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~ 309 (516)
T 1uzb_A 231 GVVNFLPGVGEEVGAYLVE-HPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEG 309 (516)
T ss_dssp TSEEECCCSSSHHHHHHHT-CTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHH
T ss_pred CeEEEEeCCCchhhhhhhc-CCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHH
Confidence 99999983 555666776 667999999999999999987542 5999999999999999999999999999
Q ss_pred HHcccCCCCCC
Q psy11677 320 ARSGSRVLQGL 330 (462)
Q Consensus 320 ~~nak~~~~~~ 330 (462)
++++|..+.|-
T Consensus 310 i~~~~~~n~GQ 320 (516)
T 1uzb_A 310 VVVSAYGFQGQ 320 (516)
T ss_dssp HHHHHHGGGGC
T ss_pred HHHHHHhCCCC
Confidence 99999998866
No 62
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=99.24 E-value=1.5e-12 Score=139.04 Aligned_cols=176 Identities=13% Similarity=0.118 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhcccccccccc----
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDA---- 204 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~---- 204 (462)
+......||.|.+.+.. +++.|.++.++|..+...|.-+ +..+++.++ ..+..
T Consensus 66 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~---~~a~~~~~~ 142 (515)
T 2d4e_A 66 VDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFA---FYAEYAEHA 142 (515)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHTTGGGT
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHHh
Confidence 55556677776654332 8999999999998887766532 333333333 22211
Q ss_pred -----C--C-----CCCCCCceeeEEEEeC-CCCccc----------------c--cccccccchHHHHHhhcCCC----
Q psy11677 205 -----S--A-----QSGGTPVEVLAEIWKN-ETLNTT----------------V--PKKHAKTSQCKYFTKMLPRY---- 249 (462)
Q Consensus 205 -----~--d-----~~~~~PlGVi~~IyEs-r~~Pnv----------------~--~~~ea~~sn~~~l~~al~~~---- 249 (462)
+ + ..++.|+||+++|++. . |-. + +.+++-.|+ ..|++.+.++
T Consensus 143 ~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~--P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~~eaGlP~ 219 (515)
T 2d4e_A 143 MEDRTFPVDRDWLYYTVRVPAGPVGIITPWNA--PLMLSTWRIAPALAFGNTVVLKPAEWSPFTA-TKLAEILKEADLPP 219 (515)
T ss_dssp TCEEECCBTTTEEEEEEEEECCCEEEECCSSS--HHHHHHHHHHHHHHTTCCEEEECCTTSCHHH-HHHHHHHHHTTCCT
T ss_pred cCcccccCCCCceeEEEEecCCceEEECCCCc--hhhhhhhhhhHHHHcCCeeeecCCCCcHHHH-HHHHHHHHHhCCCc
Confidence 1 1 1247899999999875 4 621 1 116777888 8888777776
Q ss_pred CeEEeecC-HHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCC
Q psy11677 250 PLHSQVST-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRV 326 (462)
Q Consensus 250 ~~v~~v~~-r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~ 326 (462)
+++++|+. ...+.+.|-.+..||.|..+||...-+.|.+.+. .+||+....|+|++||++|||+++|++.++.+|..
T Consensus 220 gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~ 299 (515)
T 2d4e_A 220 GVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFS 299 (515)
T ss_dssp TSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHG
T ss_pred CeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHh
Confidence 89999994 3345555555667999999999999998887763 39999999999999999999999999999999999
Q ss_pred CCCC
Q psy11677 327 LQGL 330 (462)
Q Consensus 327 ~~~~ 330 (462)
+.|-
T Consensus 300 n~GQ 303 (515)
T 2d4e_A 300 FNGE 303 (515)
T ss_dssp GGGC
T ss_pred cCCC
Confidence 8884
No 63
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=99.24 E-value=8.9e-13 Score=139.37 Aligned_cols=190 Identities=13% Similarity=0.059 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH----------------HHHHHhhcccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA----------------IKQIVAGRKIGTF 200 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~i~t~ 200 (462)
+......|++|.+.+.. +++.|+++.++|.+.+..|.-. ++.++..++ .
T Consensus 47 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~---~ 123 (478)
T 3ty7_A 47 VDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALD---N 123 (478)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHH---H
Confidence 55566667776654332 8999999999998887766532 222332222 2
Q ss_pred ccccC-C---CCCCCCceeeEEE--EeCCCCcccccc-----------------cccccchHHHHHhhcCCC----CeEE
Q psy11677 201 FTDAS-A---QSGGTPVEVLAEI--WKNETLNTTVPK-----------------KHAKTSQCKYFTKMLPRY----PLHS 253 (462)
Q Consensus 201 ~a~~~-d---~~~~~PlGVi~~I--yEsr~~Pnv~~~-----------------~ea~~sn~~~l~~al~~~----~~v~ 253 (462)
+.... . ...+.|+||+++| |... ++.+.. +++-.|+ ..|++.+.++ ++++
T Consensus 124 ~~~~~~~~~~~~~~~P~GVv~~I~PwN~P--~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~~~~~aGlP~gvv~ 200 (478)
T 3ty7_A 124 YEFEERRGDDLVVKEAIGVSGLITPWNFP--TNQTSLKLAAAFAAGSPVVLKPSEETPFAA-VILAEIFDKVGVPKGVFN 200 (478)
T ss_dssp CCSEEEETTEEEEEEECCCEEEECCSSST--THHHHHHHHHHHHHTCCEEEECCTTSCHHH-HHHHHHHHHHTCCTTTEE
T ss_pred hhcccCCccceEEecCceEEEEECCCcch--HHHHHHHHHHHHHcCCeEEEECCCcchHHH-HHHHHHHHHhCcCcCeEE
Confidence 11110 0 1358999999999 7766 653222 7777888 8888766665 8999
Q ss_pred eecC-HHHHHHHhcCCCCccEEeecCChhHHHHHHhhC--CCcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCC
Q psy11677 254 QVST-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS--QHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 254 ~v~~-r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s--~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~ 330 (462)
+|+. ...+.+.|-.+..||.|..+||...-+.|.+.+ +..||+....|+|++||++|||+++|++.++.+|+.+.|-
T Consensus 201 vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ 280 (478)
T 3ty7_A 201 LVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQ 280 (478)
T ss_dssp ECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGC
T ss_pred EEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCC
Confidence 9994 555666665667799999999999888888766 2378888888999999999999999999999999998885
Q ss_pred CCchhHHHHHHhhhcccc
Q psy11677 331 NPEDRAKAIYNLADQGEM 348 (462)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~ 348 (462)
.|.+...+..++.|
T Consensus 281 ----~C~a~~rvlV~~~i 294 (478)
T 3ty7_A 281 ----VCTAGTRVLVPNKI 294 (478)
T ss_dssp ----CTTCCCEEEEETTT
T ss_pred ----CccCCCeEEEcHHH
Confidence 34444444444443
No 64
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=99.24 E-value=1.8e-12 Score=138.82 Aligned_cols=176 Identities=11% Similarity=0.040 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH---------------HHHHHhhccccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA---------------IKQIVAGRKIGTFF 201 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~---------------~~~~~~~~~i~t~~ 201 (462)
+......||.|.+.+.. +++.|+++.++|...+..|.-+ ++.++..++ .+
T Consensus 65 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~---~~ 141 (528)
T 3v4c_A 65 VNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIE---KG 141 (528)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH---HC
T ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHh---hc
Confidence 56666777776654322 8999999999999888776532 445555444 21
Q ss_pred ccc--------C------C---CCCCCCceeeEEEEeCCCCcccc-c---c----------------cccccchHHHHHh
Q psy11677 202 TDA--------S------A---QSGGTPVEVLAEIWKNETLNTTV-P---K----------------KHAKTSQCKYFTK 244 (462)
Q Consensus 202 a~~--------~------d---~~~~~PlGVi~~IyEsr~~Pnv~-~---~----------------~ea~~sn~~~l~~ 244 (462)
..+ + . ..++.|+||+++|...- .|-.+ . . +++-.|+ ..|++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~-~~l~~ 219 (528)
T 3v4c_A 142 DYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASN-FPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTG-EIVAE 219 (528)
T ss_dssp GGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSS-STTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHH-HHHHH
T ss_pred cccccccccccccccCCCCCcceeEeeCCcEEEEECCCc-chHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHH-HHHHH
Confidence 111 1 0 12489999999994322 23221 0 1 6677777 77773
Q ss_pred ----hcCCC----CeEEeec--CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--C--cceeeeccceeEEEEccC
Q psy11677 245 ----MLPRY----PLHSQVS--TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--H--IPVLGHAEGICHVYVDKD 310 (462)
Q Consensus 245 ----al~~~----~~v~~v~--~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~--iPvi~~~~G~ch~yvd~~ 310 (462)
+|.++ +++++|+ +++....|++ +..||.|.++||....+.|.+.+. . +||+.+..|+|++||++|
T Consensus 220 l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~-~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~d 298 (528)
T 3v4c_A 220 AVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQ-HPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPE 298 (528)
T ss_dssp HHHHHHHHHTCCGGGEEEECCCCHHHHHHHHH-CTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHH
T ss_pred HHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHh-CCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCC
Confidence 44444 8999998 3566666776 567999999999999999888762 2 899999999999999999
Q ss_pred C---CHHHHHHHHHcccCCCCCC
Q psy11677 311 A---DIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 311 a---d~~~a~~i~~nak~~~~~~ 330 (462)
| |+++|++.++++|+++.|-
T Consensus 299 Ad~~dl~~Aa~~i~~~~~~n~GQ 321 (528)
T 3v4c_A 299 ALKARAETLGQGWAGSLTMGAGQ 321 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGC
T ss_pred CChhhHHHHHHHHHHHHHhcCCC
Confidence 9 8999999999999998885
No 65
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=99.22 E-value=7.8e-12 Score=132.32 Aligned_cols=175 Identities=15% Similarity=0.128 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhcccccccccc----
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDA---- 204 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~---- 204 (462)
+......|++|.+.+.. +++.|.++.++|..+...|.-. +..+++.++ ..+..
T Consensus 49 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~---~~a~~~~~~ 125 (481)
T 3jz4_A 49 TRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIE---WFAEEGKRI 125 (481)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHGGGC
T ss_pred HHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH---HHHHHHHHh
Confidence 55566667776654333 8899999999998887766532 333333333 22211
Q ss_pred -----C----C---CCCCCCceeeEEE--EeCCCCccccc-----------------ccccccchHHHHHhhcCCC----
Q psy11677 205 -----S----A---QSGGTPVEVLAEI--WKNETLNTTVP-----------------KKHAKTSQCKYFTKMLPRY---- 249 (462)
Q Consensus 205 -----~----d---~~~~~PlGVi~~I--yEsr~~Pnv~~-----------------~~ea~~sn~~~l~~al~~~---- 249 (462)
+ . ..++.|+||+++| |... ..... .+.+-.|+ ..|++.+.++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P--~~~~~~~~~~ALaaGN~VVlKps~~tp~~~-~~l~~l~~~aGlP~ 202 (481)
T 3jz4_A 126 YGDTIPGHQADKRLIVIKQPIGVTAAITPWNFP--AAMITRKAGPALAAGCTMVLKPASQTPFSA-LALAELAIRAGVPA 202 (481)
T ss_dssp CEEEECCSSTTEEEEEEEEECCEEEEECCSSST--THHHHHHHHHHHHHTCEEEEECCTTSCHHH-HHHHHHHHHHTCCT
T ss_pred cCccccccCCCceEEEEEcCccEEEEECCCcch--HHHHHHHHHHHHHcCCEEEEECCCCCcHHH-HHHHHHHHHhCcCC
Confidence 1 0 1248899999999 4333 33211 16677787 7777777665
Q ss_pred CeEEeecC--HHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccC
Q psy11677 250 PLHSQVST--REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSR 325 (462)
Q Consensus 250 ~~v~~v~~--r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~ 325 (462)
+++++|+. ++....|++ +..||.|..+||....+.|.+.+. ..||+....|+|++||++|||+++|++.++.+|+
T Consensus 203 gvv~vv~g~~~~~g~~L~~-~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~ 281 (481)
T 3jz4_A 203 GVFNVVTGSAGAVGNELTS-NPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF 281 (481)
T ss_dssp TTEEECCBCTHHHHHHHHH-CTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEeCCChHHHHHHHh-CCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHH
Confidence 89999983 444455554 566999999999999999888662 3899999999999999999999999999999999
Q ss_pred CCCCC
Q psy11677 326 VLQGL 330 (462)
Q Consensus 326 ~~~~~ 330 (462)
.+.|-
T Consensus 282 ~n~GQ 286 (481)
T 3jz4_A 282 RNAGQ 286 (481)
T ss_dssp GGGGC
T ss_pred HhCCC
Confidence 98885
No 66
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=99.21 E-value=6e-12 Score=132.45 Aligned_cols=174 Identities=16% Similarity=0.152 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhcccccccccc----
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDA---- 204 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~---- 204 (462)
+......|++|.+.+.. +++.|+++.++|..+...|.-. +...++.++ ..+..
T Consensus 31 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~---~~a~~~~~~ 107 (462)
T 3etf_A 31 IEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQARAEVTKSAALCD---WYAEHGPAM 107 (462)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHhHHHh
Confidence 55666667776654222 8899999999998877765422 222222222 11111
Q ss_pred --------CC---CCCCCCceeeEEE--EeCCCCcccccc-----------------cccccchHHHHHhhcCCC----C
Q psy11677 205 --------SA---QSGGTPVEVLAEI--WKNETLNTTVPK-----------------KHAKTSQCKYFTKMLPRY----P 250 (462)
Q Consensus 205 --------~d---~~~~~PlGVi~~I--yEsr~~Pnv~~~-----------------~ea~~sn~~~l~~al~~~----~ 250 (462)
+. ...+.|+||+++| |... ++.+.. +.+-.|+ ..|.+.+.++ +
T Consensus 108 ~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P--~~~~~~~~~~ALaaGN~VvlKps~~tp~~~-~~l~~~l~~aglP~g 184 (462)
T 3etf_A 108 LNPEPTLVENQQAVIEYRPLGVILAIMPWNFP--LWQVLRGAVPILLAGNSYLLKHAPNVTGCA-QMIARILAEAGTPAG 184 (462)
T ss_dssp TSCEECSSGGGCEEEEEEECSEEEEECCSSST--THHHHHHHHHHHHTTCEEEEECCTTCHHHH-HHHHHHHHHTTCCBT
T ss_pred cCCcccCCCCceeEEEeecCcEEEEECCCchH--HHHHHHHHHHHHhcCCEEEEECCCCCcHHH-HHHHHHHHHhCCCcC
Confidence 11 1237799999999 6665 543222 6677777 7777777776 8
Q ss_pred eEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhC---CCcceeeeccceeEEEEccCCCHHHHHHHHHcccCC
Q psy11677 251 LHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS---QHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRV 326 (462)
Q Consensus 251 ~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s---~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~ 326 (462)
++++|+ +++....|++. ..||.|.-.||...-+.|.+.+ .+-++++.| |+|++||++|||+++|++.++.+|++
T Consensus 185 v~~vv~g~~~~~~~l~~~-~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElG-Gk~p~iV~~dADl~~Aa~~i~~~~~~ 262 (462)
T 3etf_A 185 VYGWVNANNEGVSQMIND-PRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELG-GSDPFIVLNDADLELAVKAAVAGRYQ 262 (462)
T ss_dssp TEEECCCCHHHHHHHHTS-TTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECC-CCEEEEECTTSCHHHHHHHHHHHHHG
T ss_pred eEEEEECCHHHHHHHhcC-CCCCEEEEeCCchHHHHHHHHHhccCCceEEEcC-CCCccEECCCCCHHHHHHHHHHHHHh
Confidence 999999 67777777764 4699999999998777765543 124455555 99999999999999999999999999
Q ss_pred CCCC
Q psy11677 327 LQGL 330 (462)
Q Consensus 327 ~~~~ 330 (462)
+.|-
T Consensus 263 n~GQ 266 (462)
T 3etf_A 263 NTGQ 266 (462)
T ss_dssp GGGC
T ss_pred cCCC
Confidence 9885
No 67
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=99.21 E-value=6e-12 Score=133.13 Aligned_cols=177 Identities=12% Similarity=0.066 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhccccccccccCC--
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDASA-- 206 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~~d-- 206 (462)
+......|+.|.+.... +++.|.++.++|.++...|.-+ +..+++.++ ..+...+
T Consensus 46 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~---~~a~~~~~~ 122 (479)
T 2imp_A 46 ARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYID---YMAEWARRY 122 (479)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHTTTTTC
T ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHHh
Confidence 45555666666554332 8899999999988877766432 334444444 2222111
Q ss_pred --------------CCCCCCceeeEEEEeCCCCcc-c----------------c-cccccccchHHHHHhhcCCC----C
Q psy11677 207 --------------QSGGTPVEVLAEIWKNETLNT-T----------------V-PKKHAKTSQCKYFTKMLPRY----P 250 (462)
Q Consensus 207 --------------~~~~~PlGVi~~IyEsr~~Pn-v----------------~-~~~ea~~sn~~~l~~al~~~----~ 250 (462)
..++.|+||+++|+..- .|- . + +.+.+-.|+ ..|++.+.++ +
T Consensus 123 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~aGlP~g 200 (479)
T 2imp_A 123 EGEIIQSDRPGENILLFKRALGVTTGILPWN-FPFFLIARKMAPALLTGNTIVIKPSEFTPNNA-IAFAKIVDEIGLPRG 200 (479)
T ss_dssp CCEEECCSSTTEEEEEEEEECSEEEEECCSS-SHHHHHHHHHHHHHHTTCEEEEECCTTSCHHH-HHHHHHHHHHTCCTT
T ss_pred hCCccccCCCCceeEEEEeccceEEEECCCc-hHHHHHHHHHHHHHHcCCEEEEECCccchHHH-HHHHHHHHHhCCCcC
Confidence 12478999999997432 231 1 1 116777888 7777666665 8
Q ss_pred eEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCC
Q psy11677 251 LHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVL 327 (462)
Q Consensus 251 ~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~ 327 (462)
++++|+ +.+.+.+.|-.+..||.|..+||....+.|.+.+. .+||+....|+|++||++|||+++|++.++++|..+
T Consensus 201 vv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n 280 (479)
T 2imp_A 201 VFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVIN 280 (479)
T ss_dssp SEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTT
T ss_pred eEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhc
Confidence 999999 45555555545567999999999999998887652 499999999999999999999999999999999998
Q ss_pred CCC
Q psy11677 328 QGL 330 (462)
Q Consensus 328 ~~~ 330 (462)
.|-
T Consensus 281 ~GQ 283 (479)
T 2imp_A 281 SGQ 283 (479)
T ss_dssp TTC
T ss_pred CCC
Confidence 885
No 68
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=99.20 E-value=5.1e-12 Score=134.70 Aligned_cols=188 Identities=16% Similarity=0.067 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhccccccccccCC--
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDASA-- 206 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~~d-- 206 (462)
+......|+.|.+.+.. +++.|+++.++|.+++..|.-. +..+++.++ ..+...+
T Consensus 52 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~---~~a~~~~~~ 128 (508)
T 3r64_A 52 VDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITK---ESASFPGRV 128 (508)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH---HHTTSTTTC
T ss_pred HHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH---HHHHHhhhh
Confidence 55556667766654333 8899999999998887776532 444445554 3333221
Q ss_pred --------------CCCCCCceeeEEE--EeCCCCcccccc-----------------cccccchHHHHHhhcCCC----
Q psy11677 207 --------------QSGGTPVEVLAEI--WKNETLNTTVPK-----------------KHAKTSQCKYFTKMLPRY---- 249 (462)
Q Consensus 207 --------------~~~~~PlGVi~~I--yEsr~~Pnv~~~-----------------~ea~~sn~~~l~~al~~~---- 249 (462)
...+.|+||+++| |... ++.+.. +.+-.|+...|.+.+.++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P--~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~ 206 (508)
T 3r64_A 129 HGRISPSNTPGKENRVYRVAKGVVGVISPWNFP--LNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPA 206 (508)
T ss_dssp CEEEECCSSTTEEEEEEEEECSEEEEECCSSSH--HHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCT
T ss_pred cCcccccCCCCceeEEEEecceEEEEECCCcch--HHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCc
Confidence 1247899999999 5444 332211 444444413344777776
Q ss_pred CeEEeec-C-HHHHHHHhcCCCCccEEeecCChhHHHHHHhhC----CCcceeeeccceeEEEEccCCCHHHHHHHHHcc
Q psy11677 250 PLHSQVS-T-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS----QHIPVLGHAEGICHVYVDKDADIRKAIKIARSG 323 (462)
Q Consensus 250 ~~v~~v~-~-r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s----~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~na 323 (462)
+++++|+ + ++....|++ +..||.|..+||....+.|.+.+ +.+||+....|+|++||++|||+++|++-++.+
T Consensus 207 gvv~vv~g~~~~~g~~L~~-~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~ 285 (508)
T 3r64_A 207 GVISTVAGAGSEIGDHFVT-HAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVG 285 (508)
T ss_dssp TTEEECCCCTTTTHHHHHH-CSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred CeEEEEeCCCHHHHHHHhh-CCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHH
Confidence 8999999 3 677777887 66799999999999999998865 358999999999999999999999999999999
Q ss_pred cCCCCCCCCchhHHHHHHhhhcc
Q psy11677 324 SRVLQGLNPEDRAKAIYNLADQG 346 (462)
Q Consensus 324 k~~~~~~~~~~~~~~~~~~~~~~ 346 (462)
|...-|- .|.+...+..++
T Consensus 286 ~~~n~GQ----~C~a~~rvlV~~ 304 (508)
T 3r64_A 286 AFLHQGQ----ICMSINRVIVDA 304 (508)
T ss_dssp HHTSTTC----TTTCCSEEEEEH
T ss_pred HHhcCCC----CcccCcEEEEeh
Confidence 8876554 344444444333
No 69
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=99.19 E-value=5.9e-12 Score=134.03 Aligned_cols=159 Identities=16% Similarity=0.143 Sum_probs=119.5
Q ss_pred HHHHHHhCCchhhcCchhcHHH----------------HHHHHhhcccccccccc----CC----CCCCCCceeeEEEEe
Q psy11677 166 SATWALDRGVSVVICNGMQKEA----------------IKQIVAGRKIGTFFTDA----SA----QSGGTPVEVLAEIWK 221 (462)
Q Consensus 166 iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~i~t~~a~~----~d----~~~~~PlGVi~~IyE 221 (462)
+++.|+++.++|......|.-+ ++.++..++ ++..- .. ..++.|+||+++|++
T Consensus 92 ~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~---~~~g~~~~~~~~~~~~~~~~P~GVV~~I~P 168 (501)
T 1bxs_A 92 LADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWAD---KIQGRTIPMDGNFFTYTRSEPVGVCGQIIP 168 (501)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGG---GCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH---HhhCCeeeccCCcceeEEecCCceEEEECC
Confidence 8999999999998887666432 444444444 32211 11 134889999999987
Q ss_pred CCCCcc-c----------------c-cccccccchHHHHHhhcCCC----CeEEeecC--HHHHHHHhcCCCCccEEeec
Q psy11677 222 NETLNT-T----------------V-PKKHAKTSQCKYFTKMLPRY----PLHSQVST--REEISDLLSMEKHIDLIIPR 277 (462)
Q Consensus 222 sr~~Pn-v----------------~-~~~ea~~sn~~~l~~al~~~----~~v~~v~~--r~~~~~ll~~~~~iDliIPr 277 (462)
.. .|- . + +.+.+-.|+ ..|++.+.++ +++++|+. ++....|++ +..||.|..+
T Consensus 169 wN-~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~-~~~v~~I~FT 245 (501)
T 1bxs_A 169 WN-FPLLMFLWKIGPALSCGNTVVVKPAEQTPLTA-LHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISS-HMDVDKVAFT 245 (501)
T ss_dssp SS-SHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH-HHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHT-CTTCSEEEEE
T ss_pred Cc-chHHHHHHHHHHHHHcCCeeeccCCCccHHHH-HHHHHHHHHhCCCcceEEEEecCchHHHHHHHh-CCCcCEEEEE
Confidence 65 462 1 1 116777788 7788766665 99999983 445555555 6679999999
Q ss_pred CChhHHHHHHhhC---CCcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCC
Q psy11677 278 GSSDLVRSIQQKS---QHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 278 G~~~lv~~v~~~s---~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~ 330 (462)
||...-+.|.+.+ +.+||.....|+|++||++|||+++|++.++++|..+.|=
T Consensus 246 GS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ 301 (501)
T 1bxs_A 246 GSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQ 301 (501)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTC
T ss_pred CCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999888763 2599999999999999999999999999999999998884
No 70
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=99.18 E-value=6.2e-12 Score=133.92 Aligned_cols=176 Identities=14% Similarity=0.128 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhccccccccccC---
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDAS--- 205 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~~--- 205 (462)
+......||.|.+.... +++.|.++.++|......|.-+ +..+++.++ ..+...
T Consensus 60 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~---~~a~~~~~~ 136 (503)
T 1a4s_A 60 VDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIE---YYAGLAPTL 136 (503)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHGGGC
T ss_pred HHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHHh
Confidence 55555666666543221 8899999999988877665422 333333333 111111
Q ss_pred ---------C---CCCCCCceeeEEEEeCCCCcc-c----------------c-cccccccchHHHHHhhcCCC----Ce
Q psy11677 206 ---------A---QSGGTPVEVLAEIWKNETLNT-T----------------V-PKKHAKTSQCKYFTKMLPRY----PL 251 (462)
Q Consensus 206 ---------d---~~~~~PlGVi~~IyEsr~~Pn-v----------------~-~~~ea~~sn~~~l~~al~~~----~~ 251 (462)
. ..++.|+||+++|+..- .|- . + +.+.+-.|+ ..|++.+.++ ++
T Consensus 137 ~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta-~~l~~l~~~aGlP~gv 214 (503)
T 1a4s_A 137 SGQHIQLPGGAFAYTRREPLGVCAGILAWN-YPFMIAAWKCAPALACGNAVVFKPSPMTPVTG-VILAEIFHEAGVPVGL 214 (503)
T ss_dssp CEEEEECGGGCEEEEEEEECSEEEEECCSS-SHHHHHHHHHHHHHHTTCEEEEECCTTSCHHH-HHHHHHHHHTTCCTTS
T ss_pred cCCcccCCCCceeEEEEecCceEEEECCCc-chHHHHHHHHHHHHHcCCEEEEECCCCChHHH-HHHHHHHHHhCCCcCe
Confidence 0 12478999999997432 131 1 1 116677787 7788777776 99
Q ss_pred EEeecC-HHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCC
Q psy11677 252 HSQVST-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQ 328 (462)
Q Consensus 252 v~~v~~-r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~ 328 (462)
+++|+. . .+.+.|-.+..||.|..+||....+.|.+.+. .+||+....|+|++||++|||+++|++.++++|..+.
T Consensus 215 v~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~ 293 (503)
T 1a4s_A 215 VNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQ 293 (503)
T ss_dssp EEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGG
T ss_pred EEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 999994 5 66666656677999999999998888877651 5999999999999999999999999999999999988
Q ss_pred CC
Q psy11677 329 GL 330 (462)
Q Consensus 329 ~~ 330 (462)
|-
T Consensus 294 GQ 295 (503)
T 1a4s_A 294 GQ 295 (503)
T ss_dssp GC
T ss_pred CC
Confidence 84
No 71
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=99.18 E-value=5.1e-12 Score=134.72 Aligned_cols=191 Identities=10% Similarity=0.011 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH---------------HHHHHhhcc----c
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA---------------IKQIVAGRK----I 197 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~---------------~~~~~~~~~----i 197 (462)
+......||.|.+.... +++.|.++.++|.+++..|.-+ ++.+++.++ .
T Consensus 32 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~ 111 (510)
T 1ez0_A 32 VNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYH 111 (510)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 55556667766554332 9999999999999988776521 444444443 0
Q ss_pred ccccc-----ccCC-----CCCCCCceeeEEEEeC-CCCcccc-c--c-----------------cccccchHHHHHhh-
Q psy11677 198 GTFFT-----DASA-----QSGGTPVEVLAEIWKN-ETLNTTV-P--K-----------------KHAKTSQCKYFTKM- 245 (462)
Q Consensus 198 ~t~~a-----~~~d-----~~~~~PlGVi~~IyEs-r~~Pnv~-~--~-----------------~ea~~sn~~~l~~a- 245 (462)
+..+. ..+. ..++.|+||+++|++. . |-.+ . . +.+-.|+ ..|++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~--P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~ 188 (510)
T 1ez0_A 112 QAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNF--PLAFSAAGGDTASALAAGCPVIVKGHTAHPGTS-QIVAECI 188 (510)
T ss_dssp CEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSC--TTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHH-HHHHHHH
T ss_pred cccccccccccCCCCCCCceEEEecCcEEEEECCccc--hhhhhhhHHHHHHHHHcCCEEEEECCCCchHHH-HHHHHHH
Confidence 11110 0010 1247899999999877 5 8543 1 1 5666777 777744
Q ss_pred ---cCCC----CeEEeecC--HHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC-C---cceeeeccceeEEEEccCCC
Q psy11677 246 ---LPRY----PLHSQVST--REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ-H---IPVLGHAEGICHVYVDKDAD 312 (462)
Q Consensus 246 ---l~~~----~~v~~v~~--r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~-~---iPvi~~~~G~ch~yvd~~ad 312 (462)
|.++ +++++|+. ++....|++ +.+||.|..+||....+.|.+.+. + +||.....|+|++||++|||
T Consensus 189 ~~al~~aGlP~gvv~vv~g~~~~~g~~L~~-~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~~dAD 267 (510)
T 1ez0_A 189 EQALKQEQLPQAIFTLLQGNQRALGQALVS-HPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAM 267 (510)
T ss_dssp HHHHHHHTCCGGGEEEECCSCTHHHHHHHH-CTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECHHHH
T ss_pred HHHHHHhCCCCCeEEEEeCCcHHHHHHHHc-CCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEECCCCCeEEEeCCCC
Confidence 3443 89999983 565566666 567999999999999999988763 1 89999999999999999999
Q ss_pred HH--HHHHHHHcccCCCCCCCCchhHHHHHHhhhccc
Q psy11677 313 IR--KAIKIARSGSRVLQGLNPEDRAKAIYNLADQGE 347 (462)
Q Consensus 313 ~~--~a~~i~~nak~~~~~~~~~~~~~~~~~~~~~~~ 347 (462)
++ +|++.++++|+.+.|= .|.+...+..|+.
T Consensus 268 l~~~~aa~~i~~~~~~n~GQ----~C~a~~rvlV~~~ 300 (510)
T 1ez0_A 268 RAKADLADQFVASMTMGCGQ----FCTKPGVVFALNT 300 (510)
T ss_dssp HHCTTHHHHHHHHHTGGGGC----CTTCCCEEEEESS
T ss_pred ccHHHHHHHHHHHHHcCCCC----CcCCCCEEEEeCC
Confidence 99 9999999999998874 3444444444443
No 72
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=99.18 E-value=3.2e-12 Score=136.09 Aligned_cols=159 Identities=14% Similarity=0.114 Sum_probs=119.4
Q ss_pred HHHHHHhCCchhhcCchhcHHH----------------HHHHHhhcccccccccc--C-C-----CCCCCCceeeEEEEe
Q psy11677 166 SATWALDRGVSVVICNGMQKEA----------------IKQIVAGRKIGTFFTDA--S-A-----QSGGTPVEVLAEIWK 221 (462)
Q Consensus 166 iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~i~t~~a~~--~-d-----~~~~~PlGVi~~IyE 221 (462)
+++.|.++.++|......|.-+ ++.+++.++ ++..- + + ..++.|+||+++|++
T Consensus 91 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~---~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 167 (500)
T 1o04_A 91 LADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWAD---KYHGKTIPIDGDFFSYTRHEPVGVCGQIIP 167 (500)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTT---TCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH---HhhCcceecCCCceEEEEEecCCcEEEECC
Confidence 8899999999998877665422 444554444 32210 1 1 134789999999997
Q ss_pred CCCCcc-c----------------c-cccccccchHHHHHhhcCCC----CeEEeec--CHHHHHHHhcCCCCccEEeec
Q psy11677 222 NETLNT-T----------------V-PKKHAKTSQCKYFTKMLPRY----PLHSQVS--TREEISDLLSMEKHIDLIIPR 277 (462)
Q Consensus 222 sr~~Pn-v----------------~-~~~ea~~sn~~~l~~al~~~----~~v~~v~--~r~~~~~ll~~~~~iDliIPr 277 (462)
.. .|- . + +.+.+-.|+ ..|++.+.++ +++++|+ +++....|++ +..||.|..+
T Consensus 168 wN-~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~-~p~v~~I~FT 244 (500)
T 1o04_A 168 WN-FPLLMQAWKLGPALATGNVVVMKVAEQTPLTA-LYVANLIKEAGFPPGVVNIVPGFGPTAGAAIAS-HEDVDKVAFT 244 (500)
T ss_dssp SS-SHHHHHHHHHHHHHHTTCEEEEECCTTSCHHH-HHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHT-CTTCCEEEEE
T ss_pred CC-chHHHHHHHHHHHHHcCCEEEEECCccChHHH-HHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHh-CCCcCEEEEE
Confidence 65 462 1 1 116777788 7788777665 8999998 3554555555 6679999999
Q ss_pred CChhHHHHHHhhC---CCcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCC
Q psy11677 278 GSSDLVRSIQQKS---QHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 278 G~~~lv~~v~~~s---~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~ 330 (462)
||...-+.|.+.+ +.+||.....|+|++||++|||+++|++.++++|..+.|-
T Consensus 245 GS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ 300 (500)
T 1o04_A 245 GSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ 300 (500)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGC
T ss_pred CCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCC
Confidence 9999999888654 2599999999999999999999999999999999998874
No 73
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=99.18 E-value=3.1e-12 Score=135.69 Aligned_cols=176 Identities=18% Similarity=0.179 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH---------------HHHHHhhccccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA---------------IKQIVAGRKIGTFF 201 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~---------------~~~~~~~~~i~t~~ 201 (462)
+......|+.|...... +++.|.++.++|.++...|.-+ ++..+..++ .+
T Consensus 36 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~---~~ 112 (486)
T 3pqa_A 36 AKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVK---EH 112 (486)
T ss_dssp HHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH---HC
T ss_pred HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---Hh
Confidence 55555666666543222 8888988888888776655422 222222222 11
Q ss_pred cc--cCC-----CCCCCCceeeEEE--EeCCCCccccc-----------------ccccccchHHHHH----hhcCCC--
Q psy11677 202 TD--ASA-----QSGGTPVEVLAEI--WKNETLNTTVP-----------------KKHAKTSQCKYFT----KMLPRY-- 249 (462)
Q Consensus 202 a~--~~d-----~~~~~PlGVi~~I--yEsr~~Pnv~~-----------------~~ea~~sn~~~l~----~al~~~-- 249 (462)
.. .+. ...+.|+||+++| |... ...+. .+.+-.|+ ..|+ ++|+++
T Consensus 113 ~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P--~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~al~~~Gl 189 (486)
T 3pqa_A 113 RDEVIPSDDRLIFTRREPVGIVGAITPFNFP--LNLSAHKIAPAIATGNVIVHHPSSKAPLVC-IELAKIIENALKKYNV 189 (486)
T ss_dssp CEEEECCTTEEEEEEEEECSEEEEEECSSSH--HHHHHHHHHHHHHTTCEEEEEECTTSCHHH-HHHHHHHHHHHHHTTC
T ss_pred cCceecCCCceeEEEEccccEEEEECCCchH--HHHHHHHHHHHHHcCCEEEEECCCCchHHH-HHHHHHHHHHHHhcCC
Confidence 10 111 1358999999999 4332 22211 16777787 7777 665555
Q ss_pred --CeEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCCCcceeeeccceeEEEEccCCCHHHHHHHHHcccCC
Q psy11677 250 --PLHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRV 326 (462)
Q Consensus 250 --~~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~ 326 (462)
+++++|+ +.+.+.+.|-.+..||.|..+||....+.|.+.+..+||.....|+|++||++|||+++|++.++.+|+.
T Consensus 190 P~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~ 269 (486)
T 3pqa_A 190 PLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFI 269 (486)
T ss_dssp CGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHG
T ss_pred CCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcCCCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHh
Confidence 8999999 4556555554567799999999999999999987459999999999999999999999999999999999
Q ss_pred CCCC
Q psy11677 327 LQGL 330 (462)
Q Consensus 327 ~~~~ 330 (462)
+.|-
T Consensus 270 n~GQ 273 (486)
T 3pqa_A 270 YAGQ 273 (486)
T ss_dssp GGGC
T ss_pred cCCC
Confidence 8885
No 74
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=99.18 E-value=1.4e-11 Score=130.62 Aligned_cols=176 Identities=12% Similarity=0.121 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHH------------HHHHHHHHhCCchhhcCchhcHHH--------HHHHHhhccccccccccC---
Q psy11677 149 VEVLAENVNLKMEIL------------VNSATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDAS--- 205 (462)
Q Consensus 149 ~~~ia~~AK~As~~L------------~~iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~~--- 205 (462)
+......|+.|.+.. ..+++.|.++.++|.++...|.-+ +..+++.++ ..+.+.
T Consensus 45 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~---~~a~~~~~~ 121 (486)
T 1t90_A 45 IDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVE---FAAGAPSLM 121 (486)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHTTHHHHH
T ss_pred HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHHh
Confidence 455555666665432 118999999999998888776532 344444444 222111
Q ss_pred ----------C---CCCCCCceeeEEEEeCCCCccc-----------------c-cccccccchHHHHHhhcCCC----C
Q psy11677 206 ----------A---QSGGTPVEVLAEIWKNETLNTT-----------------V-PKKHAKTSQCKYFTKMLPRY----P 250 (462)
Q Consensus 206 ----------d---~~~~~PlGVi~~IyEsr~~Pnv-----------------~-~~~ea~~sn~~~l~~al~~~----~ 250 (462)
. ..++.|+||+++|+... .|-. + +.+.+-.|+ ..|++.+.++ +
T Consensus 122 ~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~aGlP~g 199 (486)
T 1t90_A 122 MGDSLASIATDVEAANYRYPIGVVGGIAPFN-FPMMVPCWMFPMAIALGNTFILKPSERTPLLT-EKLVELFEKAGLPKG 199 (486)
T ss_dssp CEEEEEEEETTEEEEEEEEECSEEEEECCSS-CTTHHHHHHHHHHHHTTCEEEEECCSSSCHHH-HHHHHHHHHTTCCTT
T ss_pred cCcccccCCCCceeEEEecccCEEEEECCCc-hhHHHHHHHHHHHHHcCCEEEEECCCCChHHH-HHHHHHHHHhCCCCC
Confidence 1 12478999999998765 4621 1 116777788 7888777766 8
Q ss_pred eEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhC--CCcceeeeccceeEEEEccCCCHHHHHHHHHcccCCC
Q psy11677 251 LHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS--QHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVL 327 (462)
Q Consensus 251 ~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s--~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~ 327 (462)
++++|+ +++....|++ +..||.|..+||....+.|.+.+ +.+||+....|+|++||++|||+++|++.++++|..+
T Consensus 200 vv~vv~g~~~~~~~L~~-~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n 278 (486)
T 1t90_A 200 VFNVVYGAHDVVNGILE-HPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGS 278 (486)
T ss_dssp SEEECCCSHHHHHHHHH-CTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGG
T ss_pred EEEEEECCHHHHHHHHh-CCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhC
Confidence 999999 5766666776 56799999999999999998765 1499999999999999999999999999999999998
Q ss_pred CCC
Q psy11677 328 QGL 330 (462)
Q Consensus 328 ~~~ 330 (462)
.|-
T Consensus 279 ~GQ 281 (486)
T 1t90_A 279 AGE 281 (486)
T ss_dssp GGC
T ss_pred CCC
Confidence 885
No 75
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=99.17 E-value=2.2e-11 Score=128.65 Aligned_cols=180 Identities=13% Similarity=0.119 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhcc---------ccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRK---------IGT 199 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~---------i~t 199 (462)
+......||.|.+.+.. +++.|.++.++|.++...|.-+ +..+++.++ .|.
T Consensus 42 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~ 121 (475)
T 1euh_A 42 VDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 121 (475)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 55556667766654333 8899999999988877666532 222222222 111
Q ss_pred ccc-ccCC--------CCCCCCceeeEEEEeCCCCc-ccc-----------------cccccccchHHHHHhhcCCC---
Q psy11677 200 FFT-DASA--------QSGGTPVEVLAEIWKNETLN-TTV-----------------PKKHAKTSQCKYFTKMLPRY--- 249 (462)
Q Consensus 200 ~~a-~~~d--------~~~~~PlGVi~~IyEsr~~P-nv~-----------------~~~ea~~sn~~~l~~al~~~--- 249 (462)
.+. ..+. ..++.|+||+++|+..- .| ... +.+.+-.|+ ..|++.+.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~-~~l~~ll~~aGlP 199 (475)
T 1euh_A 122 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFN-YPVNLAGSKIAPALIAGNVIAFKPPTQGSISG-LLLAEAFAEAGLP 199 (475)
T ss_dssp EEEGGGTCGGGTTEEEEEEEEECSEEEEECCTT-STTHHHHHHHHHHHHTTCEEEEECCSTTHHHH-HHHHHHHHHHTCC
T ss_pred cccCCCCCccccceeeEEEEeccceEEEECCCC-chHHHHHHHHHHHHHcCCEEEEeCCCcChHHH-HHHHHHHHHhCCC
Confidence 111 0111 22467999999997433 24 211 116677777 7777666665
Q ss_pred -CeEEeecC-HHHHHHHhcCCCCccEEeecCChhHHHHHHhhCCCcceeeeccceeEEEEccCCCHHHHHHHHHcccCCC
Q psy11677 250 -PLHSQVST-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVL 327 (462)
Q Consensus 250 -~~v~~v~~-r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~ 327 (462)
+++++|+. .+.+.+.|-.+..||.|..+||....+.|.+.+..+||+....|++++||++|||+++|++.++++|..+
T Consensus 200 ~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n 279 (475)
T 1euh_A 200 AGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGY 279 (475)
T ss_dssp TTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGG
T ss_pred cCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcCCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhc
Confidence 99999994 5556665555667999999999999999999873499999999999999999999999999999999998
Q ss_pred CCC
Q psy11677 328 QGL 330 (462)
Q Consensus 328 ~~~ 330 (462)
.|-
T Consensus 280 ~GQ 282 (475)
T 1euh_A 280 SGQ 282 (475)
T ss_dssp GGC
T ss_pred CCC
Confidence 885
No 76
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=99.17 E-value=6.4e-12 Score=133.56 Aligned_cols=159 Identities=16% Similarity=0.140 Sum_probs=118.9
Q ss_pred HHHHHHhCCchhhcCchhcHHH----------------HHHHHhhccccccccc----cCC----CCCCCCceeeEEEEe
Q psy11677 166 SATWALDRGVSVVICNGMQKEA----------------IKQIVAGRKIGTFFTD----ASA----QSGGTPVEVLAEIWK 221 (462)
Q Consensus 166 iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~i~t~~a~----~~d----~~~~~PlGVi~~IyE 221 (462)
+++.|.++.++|.++...|.-+ ++.++..++ .+.. .+. ..++.|+||+++|++
T Consensus 79 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~---~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 155 (495)
T 3b4w_A 79 AVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAAD---KVTWTETRTGSYGQSIVSREPVGVVGAIVA 155 (495)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGG---GSCSEEEEEETTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCcccCCCCceEEEEEccCceEEEECC
Confidence 8888888888888777665432 333343333 2211 111 134789999999986
Q ss_pred CCCCcc-c----------------c-cccccccchHHHHHhhcCCC----CeEEeec-CHHHHHHHhcCCCCccEEeecC
Q psy11677 222 NETLNT-T----------------V-PKKHAKTSQCKYFTKMLPRY----PLHSQVS-TREEISDLLSMEKHIDLIIPRG 278 (462)
Q Consensus 222 sr~~Pn-v----------------~-~~~ea~~sn~~~l~~al~~~----~~v~~v~-~r~~~~~ll~~~~~iDliIPrG 278 (462)
.- .|- . + +.+.+-.|+ ..|++.+.++ +++++|+ +++....|++ +..||.|..+|
T Consensus 156 wN-~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~-~~~v~~I~FTG 232 (495)
T 3b4w_A 156 WN-VPLFLAVNKIAPALLAGCTIVLKPAAETPLTA-NALAEVFAEVGLPEGVLSVVPGGIETGQALTS-NPDIDMFTFTG 232 (495)
T ss_dssp SS-SHHHHHHHHHHHHHHTTCEEEEECBTTSCHHH-HHHHHHHHHTTCCTTSEEECCBSHHHHHHHTT-CTTCCEEEEES
T ss_pred Cc-chHHHHHHHHHHHHHcCCEEEEecCCccHHHH-HHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHh-CCCcCEEEEeC
Confidence 43 242 1 1 116777788 7788777666 9999999 5666666775 56799999999
Q ss_pred ChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCC
Q psy11677 279 SSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 279 ~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~ 330 (462)
|....+.|.+.+. .+||+....|+|++||++|||+++|++.++++|+.+.|-
T Consensus 233 S~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ 286 (495)
T 3b4w_A 233 SSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQ 286 (495)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGC
T ss_pred CHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCC
Confidence 9999998887662 499999999999999999999999999999999998875
No 77
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=99.14 E-value=1.6e-11 Score=130.74 Aligned_cols=177 Identities=13% Similarity=0.018 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHH-HHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhcccccccccc---
Q psy11677 149 VEVLAENVNLKME-ILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDA--- 204 (462)
Q Consensus 149 ~~~ia~~AK~As~-~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~--- 204 (462)
+......|+.|.+ .... +++.|.++.++|..+...|.-+ +..+++.++ ..+..
T Consensus 56 v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~---~~a~~~~~ 132 (501)
T 1uxt_A 56 VERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLR---LAELDLKK 132 (501)
T ss_dssp HHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---TGGGGGGG
T ss_pred HHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 5555566666655 3222 8999999999998877766532 444444443 21111
Q ss_pred -----------CC------CCCCCCceeeEEEEeCCCCc-ccc-----------------cccccccchHHHHHhhcCCC
Q psy11677 205 -----------SA------QSGGTPVEVLAEIWKNETLN-TTV-----------------PKKHAKTSQCKYFTKMLPRY 249 (462)
Q Consensus 205 -----------~d------~~~~~PlGVi~~IyEsr~~P-nv~-----------------~~~ea~~sn~~~l~~al~~~ 249 (462)
+. ..++.|+||+++|+..- .| +.+ +.+.+-.|+ ..|++.+.++
T Consensus 133 ~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~~ea 210 (501)
T 1uxt_A 133 IGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFN-YPLFDAVNKITYSFIYGNAVVVKPSISDPLPA-AMAVKALLDA 210 (501)
T ss_dssp TCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTT-STTHHHHHHHHHHHHTTCEEEEECCTTSCHHH-HHHHHHHHHT
T ss_pred hcCccccccccCCCcCceEEEEEeeccEEEEECCCc-cHHHHHHHHHHHHHHcCCEEEEeCCCCchHHH-HHHHHHHHHh
Confidence 11 12368999999997433 24 211 116777787 7777777666
Q ss_pred ----CeEEeecCHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCCCcceeeeccceeEEEEccCCCHHHHHHHHHcccC
Q psy11677 250 ----PLHSQVSTREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSR 325 (462)
Q Consensus 250 ----~~v~~v~~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~ 325 (462)
+++++|+....+.+.|-.+..||.|..+||....+.|.+.+..+||+....|+|++||++|||+++|++.++++|+
T Consensus 211 GlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~ 290 (501)
T 1uxt_A 211 GFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIY 290 (501)
T ss_dssp TCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcCCCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh
Confidence 9999999422677766667789999999999999999998634999999999999999999999999999999999
Q ss_pred CCCCC
Q psy11677 326 VLQGL 330 (462)
Q Consensus 326 ~~~~~ 330 (462)
.+.|-
T Consensus 291 ~n~GQ 295 (501)
T 1uxt_A 291 SYAGQ 295 (501)
T ss_dssp GGGGC
T ss_pred cCCCC
Confidence 98884
No 78
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=99.13 E-value=1.8e-11 Score=129.62 Aligned_cols=177 Identities=15% Similarity=0.100 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhccccccccccCC--
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDASA-- 206 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~~d-- 206 (462)
+......|+.|.+.+.. +++.|+++.++|......|.-. +..+++.++ ..+...+
T Consensus 46 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~---~~a~~~~~~ 122 (485)
T 4dng_A 46 LEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILD---EAMTYTGEL 122 (485)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHGGGC
T ss_pred HHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHHh
Confidence 55556666766554222 8888988888888776554421 334444443 2222110
Q ss_pred ---------------CCCCCCceeeEEE--EeCCCCcccccc--------------cccccchH---HHHHhhcCCC---
Q psy11677 207 ---------------QSGGTPVEVLAEI--WKNETLNTTVPK--------------KHAKTSQC---KYFTKMLPRY--- 249 (462)
Q Consensus 207 ---------------~~~~~PlGVi~~I--yEsr~~Pnv~~~--------------~ea~~sn~---~~l~~al~~~--- 249 (462)
...+.|+||+++| |... ++.+.. |-+..+.. ..|.+.+.++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P--~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP 200 (485)
T 4dng_A 123 GGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFP--MNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLP 200 (485)
T ss_dssp SCEECCCCSSTTEEEEEEEEECCEEEEECCSSSH--HHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCC
T ss_pred CCeeccccCCCCceEEEEEecceEEEEECCCccH--HHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcC
Confidence 1247899999999 6554 443222 33333331 2233777776
Q ss_pred -CeEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccC
Q psy11677 250 -PLHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSR 325 (462)
Q Consensus 250 -~~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~ 325 (462)
+++++|+ +.+.+.+.|-.+..||.|..+||....+.|.+.+. .+||.....|+|++||++|||+++|++.++++|.
T Consensus 201 ~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~ 280 (485)
T 4dng_A 201 AGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF 280 (485)
T ss_dssp TTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHH
Confidence 8999999 45555555545667999999999999998887651 3899988899999999999999999999999999
Q ss_pred CCCCC
Q psy11677 326 VLQGL 330 (462)
Q Consensus 326 ~~~~~ 330 (462)
.+.|-
T Consensus 281 ~~~GQ 285 (485)
T 4dng_A 281 IHQGQ 285 (485)
T ss_dssp TCC--
T ss_pred hcCCC
Confidence 98775
No 79
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=99.13 E-value=1.4e-11 Score=131.32 Aligned_cols=177 Identities=13% Similarity=0.086 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhccccccccccC---
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDAS--- 205 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~~--- 205 (462)
+......|+.|.+.+.. +++.|+++.++|......|.-+ +...++.++ ..+.+.
T Consensus 72 v~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~---~~a~~~~~~ 148 (504)
T 3ek1_A 72 IKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIE---WFAEEAKRV 148 (504)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHHh
Confidence 55556667766654333 8899999999888877665432 333333333 222211
Q ss_pred --------C-----CCCCCCceeeEEEEeCCCCc-cc----------------c-cccccccchHHHHHhhcCCC----C
Q psy11677 206 --------A-----QSGGTPVEVLAEIWKNETLN-TT----------------V-PKKHAKTSQCKYFTKMLPRY----P 250 (462)
Q Consensus 206 --------d-----~~~~~PlGVi~~IyEsr~~P-nv----------------~-~~~ea~~sn~~~l~~al~~~----~ 250 (462)
. ..++.|+||+++|-..- .| .. + +.+.+-.|+ ..|++.+.++ +
T Consensus 149 ~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~-~~l~~l~~eaGlP~g 226 (504)
T 3ek1_A 149 YGDTIPAPQNGQRLTVIRQPVGVTAAITPWN-FPAAMITRKAAPALAAGCTMIVRPADLTPLTA-LALGVLAEKAGIPAG 226 (504)
T ss_dssp CEEEECCSSTTEEEEEEEEECCEEEEECCSS-STTHHHHHHHHHHHHHTCEEEEECCTTSCHHH-HHHHHHHHHTTCCTT
T ss_pred cCcccccccccccceeeccCceEEEEECCCc-chHHHHHHHHHHHHHcCCEEEEECCCcChHHH-HHHHHHHHHhCCCcc
Confidence 1 12488999999994211 13 21 1 116667777 7777777776 8
Q ss_pred eEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCC
Q psy11677 251 LHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVL 327 (462)
Q Consensus 251 ~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~ 327 (462)
++++|+ +...+.+.|-.+..||.|..+||....+.|.+.+. -.||.....|+|++||++|||+++|++.++.+|..+
T Consensus 227 v~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n 306 (504)
T 3ek1_A 227 VLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRN 306 (504)
T ss_dssp TEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGG
T ss_pred cEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhc
Confidence 999998 44445444444566999999999999999988762 389999999999999999999999999999999998
Q ss_pred CCC
Q psy11677 328 QGL 330 (462)
Q Consensus 328 ~~~ 330 (462)
.|-
T Consensus 307 ~GQ 309 (504)
T 3ek1_A 307 AGQ 309 (504)
T ss_dssp GGC
T ss_pred CCC
Confidence 886
No 80
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=99.12 E-value=1e-11 Score=133.06 Aligned_cols=159 Identities=14% Similarity=0.085 Sum_probs=115.1
Q ss_pred HHHHHHhCCchhhcCchhcHHH---------------HHHHHhhcccccccccc--C---C----CCCCCCceeeEEEEe
Q psy11677 166 SATWALDRGVSVVICNGMQKEA---------------IKQIVAGRKIGTFFTDA--S---A----QSGGTPVEVLAEIWK 221 (462)
Q Consensus 166 iA~aL~~~~~~IL~AN~~D~~~---------------~~~~~~~~~i~t~~a~~--~---d----~~~~~PlGVi~~IyE 221 (462)
+++.|+++.++|..++..|.-+ ++.++..++ .+... + . ..++.|+||+++|+.
T Consensus 94 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P 170 (528)
T 3u4j_A 94 VADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQAR---ALEGQTHNNIGDDRLGLVLREPVGVVGIITP 170 (528)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHT---TCCEEEECCSCTTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---HhcCeeeccCCCCceeEEEeccceEEEEECC
Confidence 8999999999998887776522 444554444 33221 1 1 135899999999973
Q ss_pred CCCCcc----------------cc--cccccccchHHHHHhhcCCC----CeEEeecC--HHHHHHHhcCCCCccEEeec
Q psy11677 222 NETLNT----------------TV--PKKHAKTSQCKYFTKMLPRY----PLHSQVST--REEISDLLSMEKHIDLIIPR 277 (462)
Q Consensus 222 sr~~Pn----------------v~--~~~ea~~sn~~~l~~al~~~----~~v~~v~~--r~~~~~ll~~~~~iDliIPr 277 (462)
.- .|- |+ +.+++-.|+ ..|++.+.++ +++++|+. ++....|++ +..||.|..+
T Consensus 171 wN-~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~-~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~-~p~vd~I~FT 247 (528)
T 3u4j_A 171 WN-FPFIIASERVPWAIGSGCTVVLKPSEFTSGTS-IRLAELAREAGIPDGVFNVVTGYGDPAGQVLAE-DPNVDMVAFT 247 (528)
T ss_dssp SS-SHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH-HHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHH-CTTCCEEEEE
T ss_pred Cc-cHHHHHHHHHHHHHHcCCeEEEEcCCccHHHH-HHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHh-CCCcCEEEEe
Confidence 22 131 11 117777888 8888766665 89999983 455556665 5669999999
Q ss_pred CChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCC
Q psy11677 278 GSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 278 G~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~ 330 (462)
||...-+.|.+.+. .+||.....|+|++||++|||+++|++.++.+|+.+.|-
T Consensus 248 GS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ 302 (528)
T 3u4j_A 248 GSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQ 302 (528)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGC
T ss_pred CCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCC
Confidence 98776666554431 478888888999999999999999999999999998885
No 81
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=99.08 E-value=6.7e-11 Score=124.90 Aligned_cols=172 Identities=17% Similarity=0.191 Sum_probs=122.3
Q ss_pred HHHHHHhCCchhhcCchhcHHH----------------HHHHHhhccccccccc----------cCC--CCCCCCceeeE
Q psy11677 166 SATWALDRGVSVVICNGMQKEA----------------IKQIVAGRKIGTFFTD----------ASA--QSGGTPVEVLA 217 (462)
Q Consensus 166 iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~i~t~~a~----------~~d--~~~~~PlGVi~ 217 (462)
+++.|+++.++|.++...|.-+ ++.+++.++ .++. .+. ...+.|+||++
T Consensus 49 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 125 (469)
T 3sza_A 49 LQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLP---EWAADEPVEKTPQTQQDELYIHSEPLGVVL 125 (469)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHH---HHHSCEECCCCGGGTTSEEEEEEEECSEEE
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH---hhhcccccCccccCCCccceeeccCCCEEE
Confidence 8889999999988887766422 333333332 2211 000 12489999999
Q ss_pred EEEeCCCCcc-c----------------c-cccccccchHHHHHhhcCCC---CeEEeec-CHHHHHHHhcCCCCccEEe
Q psy11677 218 EIWKNETLNT-T----------------V-PKKHAKTSQCKYFTKMLPRY---PLHSQVS-TREEISDLLSMEKHIDLII 275 (462)
Q Consensus 218 ~IyEsr~~Pn-v----------------~-~~~ea~~sn~~~l~~al~~~---~~v~~v~-~r~~~~~ll~~~~~iDliI 275 (462)
+|...- .|- . + +.+.+-.|+ ..|++.+.++ +++++|+ +.+.+.+|+.. .||.|.
T Consensus 126 ~I~PwN-~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~-~~l~~l~~~alP~gvv~vv~g~~~~~~~ll~~--~vd~I~ 201 (469)
T 3sza_A 126 VIGTWN-YPFNLTIQPMVGAIAAGNAVVLKPSELSENMA-SLLATIIPQYLDKDLYPVINGGVPETTELLKE--RFDHIL 201 (469)
T ss_dssp EECCSS-STTHHHHHHHHHHHHTTCEEEEECCTTSHHHH-HHHHHHHHHHSCTTTSCBCCCSHHHHHHHTTS--CCSEEE
T ss_pred EECCCc-chHHHHHHHHHHHHHcCCEEEEECCCCChHHH-HHHHHHHHHhCCcceEEEEECCHHHHHHHHhc--CCCEEE
Confidence 997422 142 1 1 116667777 7777444443 8999998 68888999975 699999
Q ss_pred ecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCCCCchhHHHHHHhhhcccc
Q psy11677 276 PRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGLNPEDRAKAIYNLADQGEM 348 (462)
Q Consensus 276 PrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~~~~~~~~~~~~~~~~~~~ 348 (462)
.+||...-+.|.+.+. .+||.....|+|++||++|||+++|++.++.+|..+.|- .|.+...+..|+.|
T Consensus 202 FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ----~C~a~~rvlV~~~i 272 (469)
T 3sza_A 202 YTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQ----TCVAPDYILCDPSI 272 (469)
T ss_dssp EESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGC----CTTSCCEEEECGGG
T ss_pred EECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCC----CCCCCcEEEEehhH
Confidence 9999999888877542 489999999999999999999999999999999998875 24444444444443
No 82
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=99.07 E-value=4.1e-11 Score=127.06 Aligned_cols=176 Identities=15% Similarity=0.099 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhccccccccccC---
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDAS--- 205 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~~--- 205 (462)
+......|++|.+.+.. +++.|+++.++|......|.-+ +...++.++ ..+...
T Consensus 52 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~---~~a~~~~~~ 128 (484)
T 3ifg_A 52 TARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIE---WFAEEGKRV 128 (484)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH---HHHHHHHhh
Confidence 55555666666654322 8889999998888777665422 333333333 222211
Q ss_pred ----------C---CCCCCCceeeEEE--EeCCCCcccc-----------------cccccccchHHHHHhhcCCC----
Q psy11677 206 ----------A---QSGGTPVEVLAEI--WKNETLNTTV-----------------PKKHAKTSQCKYFTKMLPRY---- 249 (462)
Q Consensus 206 ----------d---~~~~~PlGVi~~I--yEsr~~Pnv~-----------------~~~ea~~sn~~~l~~al~~~---- 249 (462)
. ..++.|+||+++| |... .... +.+.+-.|+ ..|++.+.++
T Consensus 129 ~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P--~~~~~~~~a~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~aGlP~ 205 (484)
T 3ifg_A 129 AGDTLPTPDANKRIVVVKEPIGVCAAITPWNFP--AAMIARKVGPALAAGCPIVVKPAESTPFSA-LAMAFLAERAGVPK 205 (484)
T ss_dssp CEEEECCSSTTEEEEEEEEECSSEEEECCSSST--THHHHHHHHHHHHHTCCEEEECCTTSCHHH-HHHHHHHHHHTCCT
T ss_pred cCccccccCCCceeEEEecCCcEEEEECCCcCh--HHHHHHHHHHHHHcCCEEEEECCCCCcHHH-HHHHHHHHHhCCCc
Confidence 0 1248899999999 4332 2211 116667777 7777776665
Q ss_pred CeEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCC
Q psy11677 250 PLHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRV 326 (462)
Q Consensus 250 ~~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~ 326 (462)
+++++|+ +...+.+.|-.+..||.|..+||...-+.|.+.+. .+||.....|++++||++|||+++|++.++.+|..
T Consensus 206 gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~ 285 (484)
T 3ifg_A 206 GVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYR 285 (484)
T ss_dssp TSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHG
T ss_pred ccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence 8999998 34455554545666999999999999999988762 38999888899999999999999999999999999
Q ss_pred CCCC
Q psy11677 327 LQGL 330 (462)
Q Consensus 327 ~~~~ 330 (462)
+.|-
T Consensus 286 n~GQ 289 (484)
T 3ifg_A 286 NNGQ 289 (484)
T ss_dssp GGGC
T ss_pred cCCC
Confidence 8885
No 83
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=99.02 E-value=3.4e-11 Score=129.27 Aligned_cols=177 Identities=18% Similarity=0.139 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhcccccccccc----
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDA---- 204 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~---- 204 (462)
+......|+.|...... +++.|+++.++|.++...|.-+ +...++.++ ..+..
T Consensus 76 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~---~~a~~~~~~ 152 (538)
T 3qan_A 76 AEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLE---YYARQMIEL 152 (538)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHHh
Confidence 55556666766553222 8889999988888776655421 222223222 21111
Q ss_pred ------C---C---CCCCCCceeeEEEEeCCCCcc-c---------------c--cccccccchHHHHHhhcCCC----C
Q psy11677 205 ------S---A---QSGGTPVEVLAEIWKNETLNT-T---------------V--PKKHAKTSQCKYFTKMLPRY----P 250 (462)
Q Consensus 205 ------~---d---~~~~~PlGVi~~IyEsr~~Pn-v---------------~--~~~ea~~sn~~~l~~al~~~----~ 250 (462)
+ . ..++.|+||+++|.... .|- . + +.+.+-.|+ ..|++.+.++ +
T Consensus 153 ~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta-~~l~~l~~eaGlP~g 230 (538)
T 3qan_A 153 NRGKEILSRPGEQNRYFYTPMGVTVTISPWN-FALAIMVGTAVAPIVTGNTVVLKPASTTPVVA-AKFVEVLEDAGLPKG 230 (538)
T ss_dssp HTCBCCCCCTTEEEEEEEEECCEEEEECCST-TTTHHHHHHHHHHHHTTCEEEEECCTTSHHHH-HHHHHHHHHTTCCTT
T ss_pred cCCeeecccCCcceeeecCCCcEEEEECCCc-hHHHHHHHHHHHHHHcCCEEEEECCCccHHHH-HHHHHHHHHhCCCCC
Confidence 1 0 13489999999996443 242 1 1 115666777 7777777776 8
Q ss_pred eEEeecC-HHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--------CcceeeeccceeEEEEccCCCHHHHHHHHH
Q psy11677 251 LHSQVST-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--------HIPVLGHAEGICHVYVDKDADIRKAIKIAR 321 (462)
Q Consensus 251 ~v~~v~~-r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--------~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~ 321 (462)
++++|+. ...+.+.|-.+..||.|..+||...-+.|.+.+. .+||+....|+|++||++|||+++|++.++
T Consensus 231 vv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~ 310 (538)
T 3qan_A 231 VINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESIL 310 (538)
T ss_dssp SEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHH
T ss_pred eEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHH
Confidence 9999993 4445554445677999999999999999988762 389999999999999999999999999999
Q ss_pred cccCCCCCC
Q psy11677 322 SGSRVLQGL 330 (462)
Q Consensus 322 nak~~~~~~ 330 (462)
.+|+.+.|-
T Consensus 311 ~~~f~n~GQ 319 (538)
T 3qan_A 311 VSAFGFSGQ 319 (538)
T ss_dssp HHHHGGGGC
T ss_pred HHHHhcCCC
Confidence 999998885
No 84
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=98.99 E-value=6.9e-11 Score=134.83 Aligned_cols=159 Identities=13% Similarity=0.117 Sum_probs=116.6
Q ss_pred HHHHHHhCCchhhcCchhcHHH--------HHHHHhhcccccccccc-----------CCC------CCCCCceeeEEEE
Q psy11677 166 SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDA-----------SAQ------SGGTPVEVLAEIW 220 (462)
Q Consensus 166 iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~-----------~d~------~~~~PlGVi~~Iy 220 (462)
+|+.|+++.++|......|.-+ +..+++.++ ..+.. +.+ ..+.|+||+++|.
T Consensus 581 ~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr---~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~ 657 (1001)
T 3haz_A 581 AAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCR---YYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAIS 657 (1001)
T ss_dssp HHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHH---HHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEc
Confidence 8899999999988877665432 444444444 33321 111 2468999999996
Q ss_pred eCCCCcc-c---------------c--cccccccchHHHHHhhcCCC----CeEEeecC-HHHHHHHhcCCCCccEEeec
Q psy11677 221 KNETLNT-T---------------V--PKKHAKTSQCKYFTKMLPRY----PLHSQVST-REEISDLLSMEKHIDLIIPR 277 (462)
Q Consensus 221 Esr~~Pn-v---------------~--~~~ea~~sn~~~l~~al~~~----~~v~~v~~-r~~~~~ll~~~~~iDliIPr 277 (462)
.-- .|- . + +.+.+-.|+ ..+++.+.++ +++|+|+. .+....|++ +..||.|+.+
T Consensus 658 PwN-fPl~i~~~~va~ALAAGNtVVlKPse~tp~ta-~~l~ell~eAGlP~gvv~vV~G~g~~g~~L~~-~p~Vd~V~FT 734 (1001)
T 3haz_A 658 PWN-FPLAIFLGQVTAALMAGNSVVAKPAEQTPRIA-REAVALLHEAGIPKSALYLVTGDGRIGAALTA-HPDIAGVVFT 734 (1001)
T ss_dssp CSS-STTHHHHHHHHHHHHTTCEEEEECCTTCHHHH-HHHHHHHHHHTCCTTTEEECCCCHHHHHHHHH-CTTCCEEEEE
T ss_pred CCC-ChHHHHHHHHHHHHHcCCEEEEecchhhHHHH-HHHHHHHHHhCcCcCcEEEEecCchHHHHHHh-CCCcCEEEec
Confidence 322 242 1 1 116667777 7777666655 99999994 334445554 5569999999
Q ss_pred CChhHHHHHHhhCC-----CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCC
Q psy11677 278 GSSDLVRSIQQKSQ-----HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 278 G~~~lv~~v~~~s~-----~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~ 330 (462)
||....+.|.+.+. .+||+....|+|++||++|||+++|++.++.||.++.|-
T Consensus 735 GSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ 792 (1001)
T 3haz_A 735 GSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQ 792 (1001)
T ss_dssp SCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGC
T ss_pred CCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999987632 489999999999999999999999999999999998885
No 85
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=98.99 E-value=1.5e-10 Score=123.13 Aligned_cols=119 Identities=16% Similarity=0.118 Sum_probs=91.2
Q ss_pred CCCceeeEEEEeCCCCcc-cc-----------------cccccccchHHHHH----hhcCCC----CeEEeecCHHHHHH
Q psy11677 210 GTPVEVLAEIWKNETLNT-TV-----------------PKKHAKTSQCKYFT----KMLPRY----PLHSQVSTREEISD 263 (462)
Q Consensus 210 ~~PlGVi~~IyEsr~~Pn-v~-----------------~~~ea~~sn~~~l~----~al~~~----~~v~~v~~r~~~~~ 263 (462)
+.|+||+++|+... .|- .+ +.+.+-.|+ ..|+ ++|.++ +++++|+....+.+
T Consensus 155 ~~P~GVv~~I~PwN-~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~ 232 (500)
T 2j6l_A 155 WNPVGLVGIITAFN-FPVAVYGWNNAIAMICGNVCLWKGAPTTSLIS-VAVTKIIAKVLEDNKLPGAICSLTCGGADIGT 232 (500)
T ss_dssp EEECSEEEEECCSS-STTHHHHHHHHHHHHTTCEEEEECCGGGHHHH-HHHHHHHHHHHHHTTCCGGGEEEECCSHHHHH
T ss_pred EecccEEEEECCCc-chhhHHHHHHHHHHHhCCEEEEECCCccHHHH-HHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHH
Confidence 78999999998654 352 11 116666777 6666 555555 89999996445556
Q ss_pred HhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCC
Q psy11677 264 LLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 264 ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~ 330 (462)
.|-.+..||.|..+||....+.|.+.+. ..||.....|+|++||++|||+++|++.++++|..+.|-
T Consensus 233 ~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ 301 (500)
T 2j6l_A 233 AMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQ 301 (500)
T ss_dssp HHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGC
T ss_pred HHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 5555677999999999999999887541 256655555999999999999999999999999998885
No 86
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=98.98 E-value=8.6e-11 Score=134.35 Aligned_cols=190 Identities=14% Similarity=0.108 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH--------HHHHHhhcccccccccc----
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDA---- 204 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~---- 204 (462)
+......|+.|...... +|+.|.++.++|.++...|.-+ +...++.++ ..+..
T Consensus 570 v~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr---~~a~~~~~~ 646 (1026)
T 4f9i_A 570 VGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLE---YYAREMIRL 646 (1026)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHH---HHHHHHHHh
Confidence 55555666666554322 8899999998888776655321 333334333 22211
Q ss_pred ---------CC---CCCCCCceeeEEEEeCCCCccc----------------c--cccccccchHHHHHhhcCCC----C
Q psy11677 205 ---------SA---QSGGTPVEVLAEIWKNETLNTT----------------V--PKKHAKTSQCKYFTKMLPRY----P 250 (462)
Q Consensus 205 ---------~d---~~~~~PlGVi~~IyEsr~~Pnv----------------~--~~~ea~~sn~~~l~~al~~~----~ 250 (462)
+. ...+.|+||+++|...- .|-. + +.+.+-.|+ ..+++.+.++ +
T Consensus 647 ~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwN-fPl~i~~~~~a~ALaaGNtVVlKPse~tplsa-~~l~ell~eAGlP~g 724 (1026)
T 4f9i_A 647 GQPQRVGHAPGELNHYFYEPKGVAAVIAPWN-FPLAISMGMASAAIVTGNCVVFKPSGITSIIG-WHLVELFREAGLPEG 724 (1026)
T ss_dssp TSCEEECCCTTEEEEEEEEECSEEEEECCSS-STTHHHHHHHHHHHHTTCEEEEECCGGGHHHH-HHHHHHHHHTTCCTT
T ss_pred cCCccccCCCCccceeEeecCceEEEeCCCc-cHHHHHHHHHHHHHHcCCEEEEEcCccchHHH-HHHHHHHHHhCcCCC
Confidence 10 12478999999996433 2421 1 116677777 7777777776 8
Q ss_pred eEEeecC-HHHH-HHHhcCCCCccEEeecCChhHHHHHHhhCC--------CcceeeeccceeEEEEccCCCHHHHHHHH
Q psy11677 251 LHSQVST-REEI-SDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--------HIPVLGHAEGICHVYVDKDADIRKAIKIA 320 (462)
Q Consensus 251 ~v~~v~~-r~~~-~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--------~iPvi~~~~G~ch~yvd~~ad~~~a~~i~ 320 (462)
++++|+. ...+ ..|++ +..||.|..+||...-+.|.+.+. -+||+....|+|++||++|||+++|++.+
T Consensus 725 vvnvV~G~g~~vg~~L~~-hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~i 803 (1026)
T 4f9i_A 725 VFNFTPGRGSVMGDYLVD-HPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHV 803 (1026)
T ss_dssp SEEECCCCHHHHHHHHHH-CTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHH
T ss_pred eEEEEecCcHHHHHHHHh-CCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHH
Confidence 9999994 4444 55555 667999999999999999987652 27999999999999999999999999999
Q ss_pred HcccCCCCCCCCchhHHHHHHhhhcccc
Q psy11677 321 RSGSRVLQGLNPEDRAKAIYNLADQGEM 348 (462)
Q Consensus 321 ~nak~~~~~~~~~~~~~~~~~~~~~~~~ 348 (462)
+.|+..+.|- .|.|...+..|+.|
T Consensus 804 v~saf~~aGQ----~C~A~~rl~V~~~i 827 (1026)
T 4f9i_A 804 LYSAFGFQGQ----KCSACSRVIVLDAV 827 (1026)
T ss_dssp HHHHHGGGGC----STTCEEEEEEEGGG
T ss_pred HHHHHhCCCC----CCCCCceEEecHHH
Confidence 9999998875 34444444444443
No 87
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=98.95 E-value=2.2e-10 Score=121.96 Aligned_cols=161 Identities=16% Similarity=0.138 Sum_probs=114.3
Q ss_pred HHHHHHHhCCchhhcCchhcHHH--------HHHHHhhccccccccc--------------cCC-----CCCCCCceeeE
Q psy11677 165 NSATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTD--------------ASA-----QSGGTPVEVLA 217 (462)
Q Consensus 165 ~iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~--------------~~d-----~~~~~PlGVi~ 217 (462)
.+++.|+++.++|..+...|.-+ +..+++.++ ..+. .+. ...+.|+||++
T Consensus 80 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~---~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 156 (503)
T 3iwj_A 80 AIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFE---YYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVG 156 (503)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHHhcCCccccccccCCCccceEEEcCCceEE
Confidence 38888999988888877665422 222222222 1111 110 12488999999
Q ss_pred EEEeCCCCcc----------------c-c-cccccccchHHHHHhhcCCC----CeEEeecC-HHHHHHHhcCCCCccEE
Q psy11677 218 EIWKNETLNT----------------T-V-PKKHAKTSQCKYFTKMLPRY----PLHSQVST-REEISDLLSMEKHIDLI 274 (462)
Q Consensus 218 ~IyEsr~~Pn----------------v-~-~~~ea~~sn~~~l~~al~~~----~~v~~v~~-r~~~~~ll~~~~~iDli 274 (462)
+|-..- .|- | + +...+-.|+ ..|++.+.++ +++++|+. ...+.+.|-.+..||.|
T Consensus 157 ~I~PwN-~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~-~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I 234 (503)
T 3iwj_A 157 LITPWN-YPMLMATWKVAPALAAGCAAILKPSELASLTC-LELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKV 234 (503)
T ss_dssp EECCSS-SHHHHHHHHHHHHHHTTCEEEEECCTTSCHHH-HHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEE
T ss_pred EECCCc-hHHHHHHHHHHHHHhcCCeEEEECCCcchHHH-HHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEE
Confidence 995221 131 1 1 116677777 7777777665 89999994 44555555455679999
Q ss_pred eecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCC
Q psy11677 275 IPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 275 IPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~ 330 (462)
..+||...-+.|.+.+. .+||+....|+|++||++|||+++|++.++.+|..+.|-
T Consensus 235 ~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ 292 (503)
T 3iwj_A 235 AFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQ 292 (503)
T ss_dssp EEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGC
T ss_pred EEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999998777776652 379999999999999999999999999999999998875
No 88
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=98.93 E-value=8.2e-10 Score=117.45 Aligned_cols=176 Identities=8% Similarity=0.064 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH----------------HHHHHhhcccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA----------------IKQIVAGRKIGTF 200 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~i~t~ 200 (462)
+......|+.|...... +++.|+++.++|......|.-+ ++.++..++ .
T Consensus 64 v~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~---~ 140 (498)
T 4f3x_A 64 IDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVR---N 140 (498)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTT---C
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHH---H
Confidence 55555666666543221 8888988888888766554321 333333333 2
Q ss_pred ccccC------C---CCCCCCceeeEEEEeCCCCcc----------------c-c-cccccccchHHHHHhhcCCC---C
Q psy11677 201 FTDAS------A---QSGGTPVEVLAEIWKNETLNT----------------T-V-PKKHAKTSQCKYFTKMLPRY---P 250 (462)
Q Consensus 201 ~a~~~------d---~~~~~PlGVi~~IyEsr~~Pn----------------v-~-~~~ea~~sn~~~l~~al~~~---~ 250 (462)
+.... . ...+.|+||+++|-..- .|- | + +...+-.|+ ..|++.+.++ +
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~-~~l~~l~~ealP~g 218 (498)
T 4f3x_A 141 LHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWN-YPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTA-LKLARLIADILPEG 218 (498)
T ss_dssp CEEECBEEEETTEEEEEEEEECCEEEEECCSS-SHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH-HHHHHHHHTTSCTT
T ss_pred hcCccccCCcccccceEEEcCcceEEEECCCc-hHHHHHHHHHHHHHHcCCeEEEECCcccHHHH-HHHHHHHHHhCCcC
Confidence 21111 0 12489999999995321 131 1 1 116667777 7777666665 9
Q ss_pred eEEeecC-H-HHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCC
Q psy11677 251 LHSQVST-R-EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRV 326 (462)
Q Consensus 251 ~v~~v~~-r-~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~ 326 (462)
++++|+. . +....|++ +..||.|..+||...-+.|.+.+. .+||.....|+|++||++|||+++|++.++.+|..
T Consensus 219 v~nvv~g~~~~~g~~L~~-~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~ 297 (498)
T 4f3x_A 219 VVNVITGRGETVGNALIN-HPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYY 297 (498)
T ss_dssp SEEECCCCTTTHHHHHHT-CTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTG
T ss_pred eEEEEeCCchHHHHHHHh-CCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHh
Confidence 9999993 4 44455555 556999999999988888776542 48999999999999999999999999999999999
Q ss_pred CCCC
Q psy11677 327 LQGL 330 (462)
Q Consensus 327 ~~~~ 330 (462)
+.|-
T Consensus 298 n~GQ 301 (498)
T 4f3x_A 298 NAGQ 301 (498)
T ss_dssp GGGC
T ss_pred cCCC
Confidence 8876
No 89
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=98.90 E-value=2.3e-10 Score=121.51 Aligned_cols=191 Identities=12% Similarity=0.105 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH---------HHHHHhhccccccccccCC-
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA---------IKQIVAGRKIGTFFTDASA- 206 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~---------~~~~~~~~~i~t~~a~~~d- 206 (462)
+..-...|++|.+.+.. +|+.|+++.++|......|.-+ +...++.++ ..+.+.+
T Consensus 46 v~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~---~~a~~~~~ 122 (490)
T 2wme_A 46 VERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLE---YYAGLVPA 122 (490)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHH---HHHHHGGG
T ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH---HHHhcccc
Confidence 44444556665544333 8888888888887665444211 222233333 2222111
Q ss_pred --------------CCCCCCceeeEEEEeCCCCc-cc---------------c--cccccccchHHHHHhhcCCC----C
Q psy11677 207 --------------QSGGTPVEVLAEIWKNETLN-TT---------------V--PKKHAKTSQCKYFTKMLPRY----P 250 (462)
Q Consensus 207 --------------~~~~~PlGVi~~IyEsr~~P-nv---------------~--~~~ea~~sn~~~l~~al~~~----~ 250 (462)
...+.|+||+++|-.-- .| +. + +.+.+-.|+ ..|++.+.++ +
T Consensus 123 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN-fP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta-~~l~~l~~eaGlP~g 200 (490)
T 2wme_A 123 IEGEQIPLRETSFVYTRREPLGVVAGIGAWN-YPVQIALWKSAPALAAGNAMIFKPSEVTPLTA-LKLAEIYTEAGVPDG 200 (490)
T ss_dssp CCEEEEEEETTEEEEEEEEECSEEEEECCSS-SHHHHHHHHHHHHHHTTCEEEEECCTTSCHHH-HHHHHHHHHHTCCTT
T ss_pred ccCccccccCCcceeEEecceeEEEEecccc-CcchhhhhhHHHHHHcCCeEEEECCcCCHHHH-HHHHHHHHHhCCCCC
Confidence 12478999999993211 13 21 1 116677787 7777666665 8
Q ss_pred eEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhC---CCcceeeeccceeEEEEccCCCHHHHHHHHHcccCC
Q psy11677 251 LHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS---QHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRV 326 (462)
Q Consensus 251 ~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s---~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~ 326 (462)
++++|+ +..++.+.|-.+..||.|.-.||...-+.+.+.+ .-.||..-..|+|++||++|||+++|++.++.+|+.
T Consensus 201 v~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~ 280 (490)
T 2wme_A 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFF 280 (490)
T ss_dssp SEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHG
T ss_pred cEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhc
Confidence 999999 4455666666677799999999987766654311 137997777799999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHhhhcccc
Q psy11677 327 LQGLNPEDRAKAIYNLADQGEM 348 (462)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~ 348 (462)
+.|= .|.+...+..|..|
T Consensus 281 n~GQ----~C~a~~rv~V~~~i 298 (490)
T 2wme_A 281 SSGQ----VCTNGTRVFIHRSQ 298 (490)
T ss_dssp GGGC----CTTCCCEEEEEGGG
T ss_pred cCCC----cCCCceeeccchhH
Confidence 8775 34444444444443
No 90
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=98.87 E-value=5.7e-10 Score=118.68 Aligned_cols=175 Identities=15% Similarity=0.085 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH----------------HHHHHhhcccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA----------------IKQIVAGRKIGTF 200 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~i~t~ 200 (462)
+......|+.|.+.+.. +++.|+++.++|......|.-+ ++.+++.++ .
T Consensus 65 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~---~ 141 (497)
T 3i44_A 65 ADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYK---E 141 (497)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhh---c
Confidence 55556666666553222 8888998888888766655321 233333222 1
Q ss_pred cc---ccC----CCCC-CCCceeeEEEEeCCCCc-cc----------------c-cccccccchHHHHHhhcCCC----C
Q psy11677 201 FT---DAS----AQSG-GTPVEVLAEIWKNETLN-TT----------------V-PKKHAKTSQCKYFTKMLPRY----P 250 (462)
Q Consensus 201 ~a---~~~----d~~~-~~PlGVi~~IyEsr~~P-nv----------------~-~~~ea~~sn~~~l~~al~~~----~ 250 (462)
.. ..+ .... +.|+||+++|-..- .| .. + +.+.+-.|+ ..|++.+.++ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN-~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~-~~l~~l~~eaGlP~g 219 (497)
T 3i44_A 142 FSFQEALIEGNEQAILHYDAIGVVGLITPWN-WPMNQVTLKVIPALLAGCTMVLKPSEIAPLSA-MLFAEILDEAALPSG 219 (497)
T ss_dssp CCSEEESSTTCSSCEEEEEECCEEEEECCSS-SHHHHHHHHHHHHHHHTCEEEEECCTTSCHHH-HHHHHHHHHTTCCTT
T ss_pred ccccccccCCceeEEEeecCceEEEEECCCc-chHHHHHHHHHHHHHcCCEEEEECCcccHHHH-HHHHHHHHHhCcCCC
Confidence 11 010 1234 88999999994221 13 11 1 116667777 7777777776 8
Q ss_pred eEEeecC-H-HHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCC
Q psy11677 251 LHSQVST-R-EEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRV 326 (462)
Q Consensus 251 ~v~~v~~-r-~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~ 326 (462)
++++|+. . +....|++ +..||.|..+||...-+.|.+.+. .+||+....|+|++||++||| ++|++.++.+|..
T Consensus 220 vvnvv~g~~~~~g~~L~~-hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~ 297 (497)
T 3i44_A 220 VFNLINGDGANVGSYLSA-HPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFY 297 (497)
T ss_dssp SEEECCCCTTTHHHHHHH-CTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHG
T ss_pred eEEEEeCCChHHHHHHHh-CCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHh
Confidence 9999993 4 44455555 566999999999988888877652 489999999999999999999 9999999999999
Q ss_pred CCCC
Q psy11677 327 LQGL 330 (462)
Q Consensus 327 ~~~~ 330 (462)
+.|-
T Consensus 298 n~GQ 301 (497)
T 3i44_A 298 NSGQ 301 (497)
T ss_dssp GGGC
T ss_pred cCCC
Confidence 8887
No 91
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=98.84 E-value=2.7e-10 Score=121.85 Aligned_cols=160 Identities=15% Similarity=0.146 Sum_probs=116.7
Q ss_pred HHHHHHhCCchhhcCchhcHHH--------HHHHHhhccccccccccCC----------------CCCCCCceeeEEEEe
Q psy11677 166 SATWALDRGVSVVICNGMQKEA--------IKQIVAGRKIGTFFTDASA----------------QSGGTPVEVLAEIWK 221 (462)
Q Consensus 166 iA~aL~~~~~~IL~AN~~D~~~--------~~~~~~~~~i~t~~a~~~d----------------~~~~~PlGVi~~IyE 221 (462)
+++.|+++.++|......|.-+ +..+++.++ ..+...+ ..++.|+||+++|-.
T Consensus 103 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~---~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~P 179 (520)
T 3ed6_A 103 IADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFM---YFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITP 179 (520)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHHhcCeecccCCCCCcccccccCccEEEEECC
Confidence 8899999999988877766432 333344433 2222211 124899999999942
Q ss_pred CCCCcc----------------c-c-cccccccchHHHHHhhcCCC----CeEEeecC-HHHHHHHhcCCCCccEEeecC
Q psy11677 222 NETLNT----------------T-V-PKKHAKTSQCKYFTKMLPRY----PLHSQVST-REEISDLLSMEKHIDLIIPRG 278 (462)
Q Consensus 222 sr~~Pn----------------v-~-~~~ea~~sn~~~l~~al~~~----~~v~~v~~-r~~~~~ll~~~~~iDliIPrG 278 (462)
.- .|- | + +.+.+-.|+ ..|++.+.++ +++++|+. ...+.+.|-.+..||.|..+|
T Consensus 180 wN-~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~-~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTG 257 (520)
T 3ed6_A 180 WN-YPLLQASWKIAPALATGCSLVMKPSEITPLTT-IRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTG 257 (520)
T ss_dssp SS-SHHHHHHHHHHHHHHHTCEEEEECCTTCCHHH-HHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEES
T ss_pred Cc-cHHHHHHHHHHHHHHcCCEEEEEcCCcchHHH-HHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEEC
Confidence 21 131 1 1 116777788 7777777665 89999994 455666565677799999999
Q ss_pred ChhHHHHHHhhCC--CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCC
Q psy11677 279 SSDLVRSIQQKSQ--HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 279 ~~~lv~~v~~~s~--~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~ 330 (462)
|...-+.|.+.+. -+||.-...|+++++|++|||+++|++.++.+|..+.|-
T Consensus 258 S~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ 311 (520)
T 3ed6_A 258 GIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQ 311 (520)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGT
T ss_pred CHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999888877652 378877777999999999999999999999999998885
No 92
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=98.83 E-value=1.2e-09 Score=117.09 Aligned_cols=175 Identities=11% Similarity=-0.010 Sum_probs=122.1
Q ss_pred cHHHHHHHHHHHH-HHHHH------------HHHHHHhCCchhhcCchhcHHH---------------HHHHHhhccccc
Q psy11677 148 PVEVLAENVNLKM-EILVN------------SATWALDRGVSVVICNGMQKEA---------------IKQIVAGRKIGT 199 (462)
Q Consensus 148 ~~~~ia~~AK~As-~~L~~------------iA~aL~~~~~~IL~AN~~D~~~---------------~~~~~~~~~i~t 199 (462)
.+......|+.|. +.+.. +++.|+++.++|.+....|.-+ ++.++...+
T Consensus 44 dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~--- 120 (534)
T 2y53_A 44 DLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGA--- 120 (534)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 4666666777764 43322 8899999999998887765432 333333322
Q ss_pred ccccc-------------CC----CCCCCCc-eeeEEEEeCCCCcc-ccc-----------------ccccccchHHHHH
Q psy11677 200 FFTDA-------------SA----QSGGTPV-EVLAEIWKNETLNT-TVP-----------------KKHAKTSQCKYFT 243 (462)
Q Consensus 200 ~~a~~-------------~d----~~~~~Pl-GVi~~IyEsr~~Pn-v~~-----------------~~ea~~sn~~~l~ 243 (462)
.+..+ ++ ..++.|+ ||+++|+..- .|- .+. .+.+-.|+ ..|+
T Consensus 121 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN-~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~-~~l~ 198 (534)
T 2y53_A 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN-FPSWGLWEKAAPALLSGVPVIVKPATATAWLT-QRMV 198 (534)
T ss_dssp TTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT-CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHH-HHHH
T ss_pred hccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc-hHHHHHHHHHHHHHHcCCEEEEECCCcchHHH-HHHH
Confidence 22211 11 1247897 9999998643 242 111 16667777 7777
Q ss_pred hhcCC-----CCeEEeecC-HHHHHHHhcCCCCccEEeecCChhHHHHHHhhC----CCcceeeeccceeEEEEccCC--
Q psy11677 244 KMLPR-----YPLHSQVST-REEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS----QHIPVLGHAEGICHVYVDKDA-- 311 (462)
Q Consensus 244 ~al~~-----~~~v~~v~~-r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s----~~iPvi~~~~G~ch~yvd~~a-- 311 (462)
+.+.+ .+++++|+. .+ ++++.-..+|.|..+||....+.|++.+ +.+||+....|+|++||++||
T Consensus 199 ~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~ 275 (534)
T 2y53_A 199 ADVVDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATP 275 (534)
T ss_dssp HHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCT
T ss_pred HHHHHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccc
Confidence 55544 288999983 22 2444323599999999999999998753 259999999999999999999
Q ss_pred ---CHHHHHHHHHcccCCCCCC
Q psy11677 312 ---DIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 312 ---d~~~a~~i~~nak~~~~~~ 330 (462)
|+++|++.++.+|+.+.|-
T Consensus 276 ~~~Dl~~Aa~~i~~~~~~n~GQ 297 (534)
T 2y53_A 276 DTPAFDLFIKEVVREMTVKSGQ 297 (534)
T ss_dssp TSHHHHHHHHHHHHHHHGGGGC
T ss_pred cccCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999998885
No 93
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=98.81 E-value=1.1e-09 Score=117.10 Aligned_cols=163 Identities=13% Similarity=0.101 Sum_probs=113.5
Q ss_pred HHHHHHhCCchhhcCchhcHHH----------------HHHHHhhcc--cccccccc---CC----CCCCCCceeeEEEE
Q psy11677 166 SATWALDRGVSVVICNGMQKEA----------------IKQIVAGRK--IGTFFTDA---SA----QSGGTPVEVLAEIW 220 (462)
Q Consensus 166 iA~aL~~~~~~IL~AN~~D~~~----------------~~~~~~~~~--i~t~~a~~---~d----~~~~~PlGVi~~Iy 220 (462)
+++.|.++.++|......|.-+ ++..+...+ .|..+..- +. ..++.|+||+++|.
T Consensus 107 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 186 (517)
T 2o2p_A 107 LADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVI 186 (517)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEEC
Confidence 8888888888887766554322 333333222 11111110 11 12478999999998
Q ss_pred eCCCCccc-----------------c-cccccccchHHHHHhhcCCC----CeEEeecC-HHHHHHHhcCCCCccEEeec
Q psy11677 221 KNETLNTT-----------------V-PKKHAKTSQCKYFTKMLPRY----PLHSQVST-REEISDLLSMEKHIDLIIPR 277 (462)
Q Consensus 221 Esr~~Pnv-----------------~-~~~ea~~sn~~~l~~al~~~----~~v~~v~~-r~~~~~ll~~~~~iDliIPr 277 (462)
..- .|-. + +.+.+-.|+ ..|++.+.++ +++++|+. ...+.+.|-.+..||.|...
T Consensus 187 PwN-~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta-~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FT 264 (517)
T 2o2p_A 187 PWN-YPLMMLSWKTAACLAAGNTVVIKPAQVTPLTA-LKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFT 264 (517)
T ss_dssp CSS-SHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH-HHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEE
T ss_pred CCc-chHHHHHHHHHHHHHcCCEEEEECCCccHHHH-HHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEE
Confidence 543 2321 1 116666777 7777777766 99999984 33444444445679999999
Q ss_pred CChhHHHHHHhhCC---CcceeeeccceeEEEEccCCCHHHHHHHHHcccCCCCCC
Q psy11677 278 GSSDLVRSIQQKSQ---HIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVLQGL 330 (462)
Q Consensus 278 G~~~lv~~v~~~s~---~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~~~~ 330 (462)
||...-+.|.+.+. .+||.....|++++||++|||+++|++.++.+|..+.|=
T Consensus 265 GS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ 320 (517)
T 2o2p_A 265 GSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGE 320 (517)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGC
T ss_pred CCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999888877542 499999999999999999999999999999999987765
No 94
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=98.67 E-value=4.8e-08 Score=105.42 Aligned_cols=177 Identities=11% Similarity=0.014 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhC-CchhhcCchhcHHH----------------HHHHHhhccccc
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDR-GVSVVICNGMQKEA----------------IKQIVAGRKIGT 199 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~-~~~IL~AN~~D~~~----------------~~~~~~~~~i~t 199 (462)
+......|+.|.+.... +|+.|..+ ++++.++...|.-+ ++..+...+
T Consensus 102 v~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~--- 178 (563)
T 4e3x_A 102 LNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAV--- 178 (563)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHH---
Confidence 55555666666654333 88888888 78877765544321 222222222
Q ss_pred ccccc-C--C------CCCCCCceeeEEEEeCCCCcc----------------cc-cccccccchHHHHHhhcCCC----
Q psy11677 200 FFTDA-S--A------QSGGTPVEVLAEIWKNETLNT----------------TV-PKKHAKTSQCKYFTKMLPRY---- 249 (462)
Q Consensus 200 ~~a~~-~--d------~~~~~PlGVi~~IyEsr~~Pn----------------v~-~~~ea~~sn~~~l~~al~~~---- 249 (462)
++..- + . ...+.|+||+++|..-- .|- |+ +.+.+-.|+ ..|++.+.++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwN-fP~~~~~~~~apALaGNtVVlKPs~~tp~sa-~~l~~ll~eAGlP~ 256 (563)
T 4e3x_A 179 ELEGEQPISVPPSTNHTVYRGLEGFVAAISPFN-FTAIGGNLAGAPALMGNVVLWKPSDTAMLAS-YAVYRILREAGLPP 256 (563)
T ss_dssp HHTTCCCCCCTTEEEEEECCBCSSEEEEECCSS-CHHHHHHHHHHHHHTTCCEEEECCGGGHHHH-HHHHHHHHHTTCCT
T ss_pred HhhCCCccCCCCCcceEEEecCceEEEEECCch-HHHHHHHHHHHHhhcCCEEEEECCCCChHHH-HHHHHHHHHhCCCC
Confidence 22110 0 0 12478899999995211 121 11 116667777 7777877776
Q ss_pred CeEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhCC--Cc------ceeeeccceeEEEEccCCCHHHHHHHH
Q psy11677 250 PLHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKSQ--HI------PVLGHAEGICHVYVDKDADIRKAIKIA 320 (462)
Q Consensus 250 ~~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s~--~i------Pvi~~~~G~ch~yvd~~ad~~~a~~i~ 320 (462)
+++++|+ +...+.+.|-.+..||.|...||...-+.|.+.+. .. ||+....|+++++|++|||+++|++.+
T Consensus 257 Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~i 336 (563)
T 4e3x_A 257 NIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGT 336 (563)
T ss_dssp TSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred CeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHH
Confidence 8999999 56667676666778999999999998777665431 12 599999999999999999999999999
Q ss_pred HcccCCCCCC
Q psy11677 321 RSGSRVLQGL 330 (462)
Q Consensus 321 ~nak~~~~~~ 330 (462)
+.++..+.|-
T Consensus 337 v~~~f~~~GQ 346 (563)
T 4e3x_A 337 LRSAFEYGGQ 346 (563)
T ss_dssp HHHHHGGGGC
T ss_pred HHHHHhcCCC
Confidence 9999998885
No 95
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=98.62 E-value=4.8e-08 Score=103.09 Aligned_cols=174 Identities=16% Similarity=0.073 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHHHHH------------HHHHHHhCCchhhcCchhcHHH-------HHHHHhhccccccccccC----
Q psy11677 149 VEVLAENVNLKMEILVN------------SATWALDRGVSVVICNGMQKEA-------IKQIVAGRKIGTFFTDAS---- 205 (462)
Q Consensus 149 ~~~ia~~AK~As~~L~~------------iA~aL~~~~~~IL~AN~~D~~~-------~~~~~~~~~i~t~~a~~~---- 205 (462)
+......|++|.+.... +++.|+++.++|.+.-..|.-+ ++.+++.++ ..+.+.
T Consensus 30 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~ev~~~~~~~~---~~~~~~~~~~ 106 (474)
T 4h7n_A 30 LAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITVLEIDSFLASID---RWCGLAPELL 106 (474)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH---HHHhhhhhcc
Confidence 55555666666554333 8888888888887665544311 344444443 222211
Q ss_pred --------CC-----CCCCCceeeEEEEeCCCCccc----------------ccc--cccccchHHHHHhhcCCC----C
Q psy11677 206 --------AQ-----SGGTPVEVLAEIWKNETLNTT----------------VPK--KHAKTSQCKYFTKMLPRY----P 250 (462)
Q Consensus 206 --------d~-----~~~~PlGVi~~IyEsr~~Pnv----------------~~~--~ea~~sn~~~l~~al~~~----~ 250 (462)
.+ ..++|+||+|+|-..- .|-. +.. ..+-.|. ..|.+.+.++ +
T Consensus 107 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN-fP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~-~~l~~~~~~ag~p~g 184 (474)
T 4h7n_A 107 QTSAKNTSIPFIALQQSLVPYPLVGVISPWN-FPLTLSMIDTIPALLAGCAVVVKPSEIAPRFV-APLLMALNTVPELRD 184 (474)
T ss_dssp CCEEEECSSTTEEEEEEEEECSEEEEEECSS-SHHHHHHTTHHHHHHHTCEEEEEECTTSCTTH-HHHHHHHTTCTTTTT
T ss_pred cccccCCCCCCccceEEEEeccEEEEECCCC-cHHHHHhcccCcchhcCCceeecccccCchHH-HHHHhhhhhhccccc
Confidence 01 2367999999994211 1421 111 5566677 7777777776 8
Q ss_pred eEEeec-CHHHHHHHhcCCCCccEEeecCChhHHHHHHhhC--CCcceeeeccceeEEEEccCCCHHHHHHHHHcccCCC
Q psy11677 251 LHSQVS-TREEISDLLSMEKHIDLIIPRGSSDLVRSIQQKS--QHIPVLGHAEGICHVYVDKDADIRKAIKIARSGSRVL 327 (462)
Q Consensus 251 ~v~~v~-~r~~~~~ll~~~~~iDliIPrG~~~lv~~v~~~s--~~iPvi~~~~G~ch~yvd~~ad~~~a~~i~~nak~~~ 327 (462)
++++|+ +.+....|+. ++|.|.=.||..--+.|.+.+ +.+||.....|+++++|++|||+++|++-++.+|...
T Consensus 185 v~~~v~g~~~~~~~l~~---~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n 261 (474)
T 4h7n_A 185 VLIFVEGGGETGANLIN---YVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVN 261 (474)
T ss_dssp TEEECCCCHHHHHHHHT---TCSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGG
T ss_pred ceeeccccchhhhhhhh---ccceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHHHHHHHHhhhccC
Confidence 999999 6888888874 399999999998877766543 1589999999999999999999999999999999998
Q ss_pred CCC
Q psy11677 328 QGL 330 (462)
Q Consensus 328 ~~~ 330 (462)
.|-
T Consensus 262 ~GQ 264 (474)
T 4h7n_A 262 TGQ 264 (474)
T ss_dssp GGC
T ss_pred CCC
Confidence 777
No 96
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=97.77 E-value=0.00012 Score=77.28 Aligned_cols=91 Identities=30% Similarity=0.485 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCC-CHHHHHHHHHHHHH
Q psy11677 365 LFISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSL-TPSKLKSLSTGLKQ 443 (462)
Q Consensus 365 ~~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L-~~~ri~~m~~~l~~ 443 (462)
...+.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-+..+.|+.+++.+++.+ +...++.+++.+++
T Consensus 18 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~ 97 (468)
T 1vlu_A 18 QIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKD 97 (468)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999998888999999899999 99999999999999
Q ss_pred HHhCCCCCcccch
Q psy11677 444 IAESSHTNVGKFV 456 (462)
Q Consensus 444 ia~l~dDPvg~v~ 456 (462)
+..++ +|+|++.
T Consensus 98 ~~~~~-~~~g~~~ 109 (468)
T 1vlu_A 98 VAELE-DPVGKVK 109 (468)
T ss_dssp HHHSC-CSSSCEE
T ss_pred HhhcC-CCCCeec
Confidence 99999 7998864
No 97
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=97.75 E-value=0.00016 Score=75.31 Aligned_cols=90 Identities=23% Similarity=0.401 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
..+.|++|....+.++.++|.++|+++++.|++++++|.+++.+|+.+.+..|+.+++.+|+.+....++.+++.++..+
T Consensus 19 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a 98 (427)
T 1o20_A 19 KAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVI 98 (427)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 34578889999999999999999999999999999999999999999888889999999999999999999999999999
Q ss_pred hCCCCCcccch
Q psy11677 446 ESSHTNVGKFV 456 (462)
Q Consensus 446 ~l~dDPvg~v~ 456 (462)
+.+ ++.|+.+
T Consensus 99 ~~~-~~~g~~~ 108 (427)
T 1o20_A 99 GLK-DPVGEVI 108 (427)
T ss_dssp HSC-CCTTCEE
T ss_pred hcc-cccCccc
Confidence 998 6877654
No 98
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=97.53 E-value=0.0002 Score=74.90 Aligned_cols=93 Identities=23% Similarity=0.371 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHH
Q psy11677 364 SLFISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQ 443 (462)
Q Consensus 364 ~~~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ 443 (462)
...++.|++|....+.++.++|.++|+++++.|++++++|.+++.+|+.+.+..|++++..+|+.+....+..+++.++.
T Consensus 29 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~ 108 (444)
T 4ghk_A 29 TDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQ 108 (444)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHH
Confidence 34567789999999999999999999999999999999999999999987776678899999999999999999999999
Q ss_pred HHhCCCCCcccchh
Q psy11677 444 IAESSHTNVGKFVK 457 (462)
Q Consensus 444 ia~l~dDPvg~v~~ 457 (462)
.+.+. +|.|+.+.
T Consensus 109 ~a~~~-~~~g~~~~ 121 (444)
T 4ghk_A 109 VATLP-DPIGEMSN 121 (444)
T ss_dssp HHHSC-CCTTCEEE
T ss_pred HHhhc-cccCccCC
Confidence 99999 68887653
No 99
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=97.38 E-value=0.00084 Score=70.60 Aligned_cols=89 Identities=49% Similarity=0.689 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|...++ .|+..++.+||......+..+++.++..+
T Consensus 34 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~-~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a 112 (463)
T 2h5g_A 34 QGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAE-GRLAAPLLKRLSLSTSKLNSLAIGLRQIA 112 (463)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT-TTSCHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccc-ccCCCchhhhhhhhHHHHHHHHHHHHHHH
Confidence 35578889899999999999999999999999999999999999997766 66778898999888899999999999999
Q ss_pred -hCCCCCcccch
Q psy11677 446 -ESSHTNVGKFV 456 (462)
Q Consensus 446 -~l~dDPvg~v~ 456 (462)
.++ ++.|+++
T Consensus 113 ~~~~-~~~g~~~ 123 (463)
T 2h5g_A 113 ASSQ-DSVGRVL 123 (463)
T ss_dssp HHCT-TSTTCEE
T ss_pred HhhH-hhcCccc
Confidence 556 6888764
No 100
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=93.68 E-value=0.072 Score=55.61 Aligned_cols=78 Identities=13% Similarity=0.110 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHH
Q psy11677 365 LFISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQI 444 (462)
Q Consensus 365 ~~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~i 444 (462)
..++.|++|....+.++.++|.++|+++|+.|++++++|.+++.+|.-+. +.++....+....+.++.+++.++++
T Consensus 32 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~~~ev~~~~~~~~~~a~~~~~~ 107 (457)
T 3lns_A 32 SLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKP----KDVVDLAEIGAVLHEIDFALAHLDEW 107 (457)
T ss_dssp HHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCC----HHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34567899999999999999999999999999999999999999986532 34555567777788899999988887
Q ss_pred Hh
Q psy11677 445 AE 446 (462)
Q Consensus 445 a~ 446 (462)
..
T Consensus 108 ~~ 109 (457)
T 3lns_A 108 VA 109 (457)
T ss_dssp TS
T ss_pred hc
Confidence 64
No 101
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=92.80 E-value=0.12 Score=54.81 Aligned_cols=79 Identities=10% Similarity=0.062 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHH
Q psy11677 365 LFISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQI 444 (462)
Q Consensus 365 ~~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~i 444 (462)
..++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-+.. ..+. ..+......++.++..++++
T Consensus 67 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a~-~ev~~~~~~l~~~a~~~~~~ 141 (528)
T 3v4c_A 67 RACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPE----ARLN-GERGRTTGQLRLFADHIEKG 141 (528)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH----HHHH-HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHH-HHHHHHHHHHHHHHHHHhhc
Confidence 345678999999999999999999999999999999999999998864321 1222 23445667888888888875
Q ss_pred HhCC
Q psy11677 445 AESS 448 (462)
Q Consensus 445 a~l~ 448 (462)
..+.
T Consensus 142 ~~~~ 145 (528)
T 3v4c_A 142 DYLD 145 (528)
T ss_dssp GGGC
T ss_pred cccc
Confidence 4444
No 102
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=92.04 E-value=0.19 Score=52.68 Aligned_cols=78 Identities=13% Similarity=0.112 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHH
Q psy11677 365 LFISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQI 444 (462)
Q Consensus 365 ~~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~i 444 (462)
..++.|++|.+..+.++.++|.++|+++++.|++++++|.+++.+|.-+. +.++....+......++.+++.+++.
T Consensus 22 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~~~ev~~~~~~~~~~~~~~~~~ 97 (469)
T 3sza_A 22 EAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKN----EWNAYYEEVVYVLEEIEYMIQKLPEW 97 (469)
T ss_dssp HHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34567899999999999999999999999999999999999999886432 23344455555667788888888777
Q ss_pred Hh
Q psy11677 445 AE 446 (462)
Q Consensus 445 a~ 446 (462)
+.
T Consensus 98 ~~ 99 (469)
T 3sza_A 98 AA 99 (469)
T ss_dssp HS
T ss_pred hc
Confidence 64
No 103
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=91.98 E-value=0.14 Score=54.17 Aligned_cols=77 Identities=13% Similarity=0.142 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-+.. ..+..+ +...-+.++.++..++++.
T Consensus 35 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a~~E-v~~~~~~~~~~a~~~~~~~ 109 (510)
T 1ez0_A 35 AATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPE----VRLTGE-IARTANQLRLFADVVNSGS 109 (510)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH----HHHHHH-HHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHHHH-HHHHHHHHHHHHHHHHhCc
Confidence 45578889899999999999999999999999999999999999863322 223323 3345567777777777633
Q ss_pred hC
Q psy11677 446 ES 447 (462)
Q Consensus 446 ~l 447 (462)
-+
T Consensus 110 ~~ 111 (510)
T 1ez0_A 110 YH 111 (510)
T ss_dssp GG
T ss_pred cc
Confidence 33
No 104
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=91.57 E-value=0.16 Score=53.43 Aligned_cols=77 Identities=12% Similarity=0.143 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-+- +.++. ..+...-..++.++..++++.
T Consensus 31 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~-~ev~~~~~~~~~~a~~~~~~~ 105 (484)
T 3ros_A 31 AINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKL----LSESK-EEVELCVSICNYYADHGPEML 105 (484)
T ss_dssp HHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----HHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 4567899999999999999999999999999999999999999986432 23333 345556677888888887775
Q ss_pred hC
Q psy11677 446 ES 447 (462)
Q Consensus 446 ~l 447 (462)
..
T Consensus 106 ~~ 107 (484)
T 3ros_A 106 KP 107 (484)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 105
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=91.38 E-value=1.1 Score=47.01 Aligned_cols=78 Identities=10% Similarity=0.112 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|....+.++.++|.++|+++++.|++++++|.+++.+|.- .+..- .+ ..+..+++.++..+
T Consensus 49 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G------k~~~e-a~-----~ev~~~~~~l~~~a 116 (479)
T 2imp_A 49 AIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGG------KIQQL-AE-----VEVAFTADYIDYMA 116 (479)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHC------CCHHH-HH-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCHHH-HH-----HHHHHHHHHHHHHH
Confidence 34578888889999999999999999999999999999999888862 22111 11 45788899999988
Q ss_pred hCCCCCcccc
Q psy11677 446 ESSHTNVGKF 455 (462)
Q Consensus 446 ~l~dDPvg~v 455 (462)
...+...|+.
T Consensus 117 ~~~~~~~~~~ 126 (479)
T 2imp_A 117 EWARRYEGEI 126 (479)
T ss_dssp TTTTTCCCEE
T ss_pred HHHHHhhCCc
Confidence 7763445544
No 106
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=91.16 E-value=0.28 Score=51.43 Aligned_cols=75 Identities=12% Similarity=0.132 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|.+..+.++.++|.++|+++++.|++++++|.++..+|. |.+.. .....+..+++.++..+
T Consensus 49 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~------Gk~~~------~a~~ev~~~~~~~~~~a 116 (485)
T 4dng_A 49 AFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARET------GGTII------KSTIELEQTIAILDEAM 116 (485)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH------CCCHH------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCHH------HHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999997776664 32211 11235788888888888
Q ss_pred hCCCCCcc
Q psy11677 446 ESSHTNVG 453 (462)
Q Consensus 446 ~l~dDPvg 453 (462)
... ++++
T Consensus 117 ~~~-~~~~ 123 (485)
T 4dng_A 117 TYT-GELG 123 (485)
T ss_dssp HHG-GGCS
T ss_pred HHH-HHhC
Confidence 776 4543
No 107
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=91.15 E-value=0.19 Score=53.52 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=57.7
Q ss_pred HHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGS-RVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQI 444 (462)
Q Consensus 366 ~~~~Ar~As-~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~i 444 (462)
..+.|++|+ +..+.++.++|.++|+++|+.|++++++|.+++.+|.-+. +.++.. ++...-..++.++...+++
T Consensus 48 Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~~-ev~~~~~~~~~~a~~~~~~ 122 (534)
T 2y53_A 48 AFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTT----RNDSAV-DIDGGIFTLSYYAKLGASL 122 (534)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHHH-HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----HHHHHH-HHHHHHHHHHHHHHHHHhc
Confidence 345678885 8899999999999999999999999999999988886322 223332 4444556677777766666
Q ss_pred HhCC
Q psy11677 445 AESS 448 (462)
Q Consensus 445 a~l~ 448 (462)
..++
T Consensus 123 ~~~~ 126 (534)
T 2y53_A 123 GEVH 126 (534)
T ss_dssp CSCS
T ss_pred cccc
Confidence 5544
No 108
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=90.40 E-value=0.41 Score=49.91 Aligned_cols=49 Identities=10% Similarity=0.167 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHH
Q psy11677 364 SLFISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLS 412 (462)
Q Consensus 364 ~~~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~ 412 (462)
-..++.||+|.+..+.++.++|.++|+++++.|.+++++|.+++.+|.-
T Consensus 15 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 63 (464)
T 3k9d_A 15 RNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETG 63 (464)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 3456789999999999999999999999999999999999999888754
No 109
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=90.35 E-value=0.46 Score=50.18 Aligned_cols=76 Identities=14% Similarity=0.141 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|.+..+.++.++|.++|+++++.|++++++|.+++.+|.-+. +.++. ..+..+++.++..+
T Consensus 55 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~~a~--------~Ev~~~~~~~~~~a 122 (508)
T 3r64_A 55 AYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGST----RSKAN--------LEITLAGNITKESA 122 (508)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCC----HHHHH--------HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----HHHHH--------HHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999998888775321 11111 14788889999999
Q ss_pred hCCCCCccc
Q psy11677 446 ESSHTNVGK 454 (462)
Q Consensus 446 ~l~dDPvg~ 454 (462)
... +++..
T Consensus 123 ~~~-~~~~~ 130 (508)
T 3r64_A 123 SFP-GRVHG 130 (508)
T ss_dssp TST-TTCCE
T ss_pred HHh-hhhcC
Confidence 888 55543
No 110
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=89.89 E-value=0.48 Score=49.82 Aligned_cols=71 Identities=10% Similarity=0.108 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-+. +.++..+ +...++.++..+
T Consensus 53 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~~e--------v~~~~~~~~~~a 120 (487)
T 2w8n_A 53 AVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKP----LKEAHGE--------ILYSAFFLEWFS 120 (487)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHHHH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----HHHHHHH--------HHHHHHHHHHHH
Confidence 3557899999999999999999999999999999999999999886322 1222222 556666666666
Q ss_pred hCC
Q psy11677 446 ESS 448 (462)
Q Consensus 446 ~l~ 448 (462)
+..
T Consensus 121 ~~~ 123 (487)
T 2w8n_A 121 EEA 123 (487)
T ss_dssp HHG
T ss_pred HHH
Confidence 443
No 111
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=89.86 E-value=0.47 Score=49.80 Aligned_cols=47 Identities=15% Similarity=0.311 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLS 412 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~ 412 (462)
.++.|++|.+..+.++.++|.++|+++++.|++++++|.+++.+|.-
T Consensus 49 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G 95 (490)
T 2ve5_A 49 AVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTG 95 (490)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45678999999999999999999999999999999999999998864
No 112
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=89.45 E-value=0.55 Score=49.13 Aligned_cols=47 Identities=9% Similarity=0.159 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLS 412 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~ 412 (462)
.++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-
T Consensus 50 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G 96 (478)
T 3ty7_A 50 AVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELG 96 (478)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 45678999999999999999999999999999999999999888864
No 113
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=89.35 E-value=0.54 Score=49.91 Aligned_cols=69 Identities=12% Similarity=0.230 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-+. +.++ .+..+++.++..+
T Consensus 57 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea----------ev~~~~~~~~~~a 122 (517)
T 3r31_A 57 AIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKP----IQET----------IVADPTSGADAFE 122 (517)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHH----------HHHSHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----HHHH----------HHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999886432 1111 4555666666666
Q ss_pred hCC
Q psy11677 446 ESS 448 (462)
Q Consensus 446 ~l~ 448 (462)
...
T Consensus 123 ~~~ 125 (517)
T 3r31_A 123 FFG 125 (517)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 114
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=89.19 E-value=0.57 Score=49.36 Aligned_cols=47 Identities=9% Similarity=0.106 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLS 412 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~ 412 (462)
.++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-
T Consensus 55 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G 101 (497)
T 3k2w_A 55 ALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQG 101 (497)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45678999999999999999999999999999999999998888754
No 115
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=89.10 E-value=0.59 Score=49.27 Aligned_cols=46 Identities=15% Similarity=0.228 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDL 411 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl 411 (462)
.++.|++|....+.++.++|.++|+++|+.|++++++|.+++.+|.
T Consensus 65 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 110 (495)
T 1wnd_A 65 AVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNC 110 (495)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3457888999999999999999999999999999999999998886
No 116
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=88.77 E-value=0.63 Score=48.89 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHH
Q psy11677 365 LFISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLS 412 (462)
Q Consensus 365 ~~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~ 412 (462)
..++.|++|....+.++.++|.++|+++++.|++++++|.+++.+|.-
T Consensus 46 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 93 (490)
T 3ju8_A 46 AAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETG 93 (490)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 345678999999999999999999999999999999999999988863
No 117
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=88.75 E-value=0.25 Score=52.21 Aligned_cols=75 Identities=15% Similarity=0.175 Sum_probs=54.9
Q ss_pred HHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSR---VLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLK 442 (462)
Q Consensus 366 ~~~~Ar~As~---~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~ 442 (462)
..+.|++|.+ ..+.++.++|.++|+++++.|++++++|.+++.+|.-+. +.+++...+...-+.++.++..++
T Consensus 63 av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~e~~~~ev~~~~~~~~~~a~~~~ 138 (501)
T 1bxs_A 63 AVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKL----FSNAYLMDLGGCIKTLRYCAGWAD 138 (501)
T ss_dssp HHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCC----HHHHHHTHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456888887 799999999999999999999999999999998886322 222334444444556666665555
Q ss_pred HH
Q psy11677 443 QI 444 (462)
Q Consensus 443 ~i 444 (462)
++
T Consensus 139 ~~ 140 (501)
T 1bxs_A 139 KI 140 (501)
T ss_dssp GC
T ss_pred Hh
Confidence 43
No 118
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=88.73 E-value=0.16 Score=54.08 Aligned_cols=75 Identities=12% Similarity=0.271 Sum_probs=55.3
Q ss_pred HHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGS--RVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQ 443 (462)
Q Consensus 366 ~~~~Ar~As--~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ 443 (462)
.++.|++|. ...+.++.++|.++|+++|+.|++++++|.+++.+|.-+ .+.++ ...+...-+.++.++..+++
T Consensus 66 av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk----~~~ea-~~ev~~~~~~l~~~a~~~~~ 140 (528)
T 3u4j_A 66 AVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGK----PIAQA-RGEIGFCADLWSYAAGQARA 140 (528)
T ss_dssp HHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC----CHHHH-HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 345688888 678999999999999999999999999999999888642 12233 33444455566666666655
Q ss_pred HH
Q psy11677 444 IA 445 (462)
Q Consensus 444 ia 445 (462)
+.
T Consensus 141 ~~ 142 (528)
T 3u4j_A 141 LE 142 (528)
T ss_dssp CC
T ss_pred hc
Confidence 44
No 119
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=88.60 E-value=0.67 Score=48.99 Aligned_cols=48 Identities=17% Similarity=0.290 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSD 413 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~ 413 (462)
.++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-+
T Consensus 54 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 101 (505)
T 3prl_A 54 AIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAK 101 (505)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 456788999999999999999999999999999999999999988643
No 120
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=88.54 E-value=0.67 Score=49.03 Aligned_cols=75 Identities=8% Similarity=0.104 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-+. +.++..+ +...-+.++.++..++++.
T Consensus 79 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~~e-v~~~~~~~~~~a~~~~~~~ 153 (516)
T 1uzb_A 79 ALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKN----WVEASAD-VAEAIDFIEYYARAALRYR 153 (516)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHHHH-HHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----HHHHHHH-HHHHHHHHHHHHHHHHHhc
Confidence 3457888999999999999999999999999999999999998886322 2233322 3334455555665555544
No 121
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=88.27 E-value=0.29 Score=51.70 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=52.8
Q ss_pred HHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSR---VLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLK 442 (462)
Q Consensus 366 ~~~~Ar~As~---~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~ 442 (462)
.++.|++|.. ..+.++.++|.++|+++|+.|++++++|.+++.+|.-+. +.+++...+...-+.++.++..++
T Consensus 62 av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~~~ev~~~~~~~~~~a~~~~ 137 (500)
T 1o04_A 62 AVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKP----YVISYLVDLDMVLKCLRYYAGWAD 137 (500)
T ss_dssp HHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456888888 899999999999999999999999999999998886321 122333334444445555555444
Q ss_pred H
Q psy11677 443 Q 443 (462)
Q Consensus 443 ~ 443 (462)
+
T Consensus 138 ~ 138 (500)
T 1o04_A 138 K 138 (500)
T ss_dssp T
T ss_pred H
Confidence 3
No 122
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=88.12 E-value=0.74 Score=48.20 Aligned_cols=77 Identities=17% Similarity=0.230 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|.+..+.++.++|.++|+++++.|++++++|.+++.+|.-+.. .++ ...+..+++.++..+
T Consensus 52 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a--------~~ev~~~~~~~~~~a 119 (481)
T 3jz4_A 52 AIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPL----AEA--------KGEISYAASFIEWFA 119 (481)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH----HHH--------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH----HHH--------HHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999998888754321 111 135666777777777
Q ss_pred hCCCCCccc
Q psy11677 446 ESSHTNVGK 454 (462)
Q Consensus 446 ~l~dDPvg~ 454 (462)
...+++.|+
T Consensus 120 ~~~~~~~~~ 128 (481)
T 3jz4_A 120 EEGKRIYGD 128 (481)
T ss_dssp HHGGGCCEE
T ss_pred HHHHHhcCc
Confidence 653234443
No 123
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=88.12 E-value=0.74 Score=48.11 Aligned_cols=78 Identities=15% Similarity=0.194 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
..+.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-+. +.++ ...+..+++.++..+
T Consensus 45 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea--------~~ev~~~~~~~~~~a 112 (475)
T 1euh_A 45 VYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKG----YKSA--------VSEVVRTAEIINYAA 112 (475)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCC----HHHH--------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----HHHH--------HHHHHHHHHHHHHHH
Confidence 4557888889999999999999999999999999999999988886321 1111 246788888888888
Q ss_pred hCCCCCcccc
Q psy11677 446 ESSHTNVGKF 455 (462)
Q Consensus 446 ~l~dDPvg~v 455 (462)
+..+...|+.
T Consensus 113 ~~~~~~~~~~ 122 (475)
T 1euh_A 113 EEGLRMEGEV 122 (475)
T ss_dssp HHHTTCCEEE
T ss_pred HHHHHhcCCc
Confidence 7552334553
No 124
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=88.07 E-value=0.77 Score=47.72 Aligned_cols=46 Identities=13% Similarity=0.237 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDL 411 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl 411 (462)
.++.|++|.+..+.++.++|.++|+++++.|++++++|.++..+|.
T Consensus 34 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 79 (462)
T 3etf_A 34 ALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREM 79 (462)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999999999988875
No 125
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=88.06 E-value=0.75 Score=48.26 Aligned_cols=71 Identities=11% Similarity=0.149 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-+. +.++. ..+...++.++..+
T Consensus 48 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~~a~--------~ev~~~~~~~~~~a 115 (486)
T 1t90_A 48 AAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKN----TKEAL--------GEVGRGIENVEFAA 115 (486)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCC----HHHHH--------HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----HHHHH--------HHHHHHHHHHHHHH
Confidence 4557888999999999999999999999999999999999998886321 11111 24666667777655
Q ss_pred hCC
Q psy11677 446 ESS 448 (462)
Q Consensus 446 ~l~ 448 (462)
.+.
T Consensus 116 ~~~ 118 (486)
T 1t90_A 116 GAP 118 (486)
T ss_dssp THH
T ss_pred HHH
Confidence 443
No 126
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=87.96 E-value=0.72 Score=48.98 Aligned_cols=71 Identities=11% Similarity=0.158 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|....+.++.++|.++|+++|+.|++++++|.+++.+|.-+.. .++. ..+...++.++..+
T Consensus 69 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~ea~--------~Ev~~~~~~l~~~a 136 (521)
T 4e4g_A 69 AVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTI----DDAK--------GDIVRGLEVCEFVI 136 (521)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCH----HHHH--------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH----HHHH--------HHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999988864221 1121 24777778888777
Q ss_pred hCC
Q psy11677 446 ESS 448 (462)
Q Consensus 446 ~l~ 448 (462)
.+.
T Consensus 137 ~~~ 139 (521)
T 4e4g_A 137 GIP 139 (521)
T ss_dssp THH
T ss_pred HHH
Confidence 655
No 127
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=87.73 E-value=0.8 Score=48.49 Aligned_cols=71 Identities=10% Similarity=0.128 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|....+.++.++|.++|+++++.|++++++|.+++.+|.-+. +.++. ..+..+++.++..+
T Consensus 69 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~--------~ev~~~~~~l~~~a 136 (515)
T 2d4e_A 69 AAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQV----LRIVR--------AQVARAAENFAFYA 136 (515)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHH--------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----HHHHH--------HHHHHHHHHHHHHH
Confidence 3457888989999999999999999999999999999999988886221 11122 24777888899888
Q ss_pred hCC
Q psy11677 446 ESS 448 (462)
Q Consensus 446 ~l~ 448 (462)
+..
T Consensus 137 ~~~ 139 (515)
T 2d4e_A 137 EYA 139 (515)
T ss_dssp TTG
T ss_pred HHH
Confidence 876
No 128
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=87.49 E-value=0.86 Score=48.08 Aligned_cols=71 Identities=6% Similarity=0.080 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|....+.++.++|.++|+++++.|++++++|.+++.+|. |.+..-- ...+..+++.++..+
T Consensus 63 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~------Gk~~~ea------~~ev~~~~~~~~~~a 130 (503)
T 1a4s_A 63 AVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINN------GKTITEA------EYDIDAAWQCIEYYA 130 (503)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH------CCCHHHH------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCHHHH------HHHHHHHHHHHHHHH
Confidence 3457888889999999999999999999999999999999988884 2221111 135778888888888
Q ss_pred hCC
Q psy11677 446 ESS 448 (462)
Q Consensus 446 ~l~ 448 (462)
+..
T Consensus 131 ~~~ 133 (503)
T 1a4s_A 131 GLA 133 (503)
T ss_dssp HHG
T ss_pred HHH
Confidence 766
No 129
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=86.79 E-value=0.86 Score=48.06 Aligned_cols=71 Identities=8% Similarity=0.065 Sum_probs=54.8
Q ss_pred HHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSR-VLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQI 444 (462)
Q Consensus 366 ~~~~Ar~As~-~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~i 444 (462)
.++.|++|.+ ..+.++.++|.++|+++++.|++++++|.+++.+|.-+ .+.++. ..+..+++.++..
T Consensus 59 av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk----~~~ea~--------~Ev~~~~~~l~~~ 126 (501)
T 1uxt_A 59 TLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGK----PKSAAV--------GEVKAAVDRLRLA 126 (501)
T ss_dssp HHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC----CHHHHH--------HHHHHHHHHHHTG
T ss_pred HHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC----CHHHHH--------HHHHHHHHHHHHH
Confidence 3456888888 89999999999999999999999999999998888622 111221 1267777888777
Q ss_pred HhCC
Q psy11677 445 AESS 448 (462)
Q Consensus 445 a~l~ 448 (462)
+...
T Consensus 127 a~~~ 130 (501)
T 1uxt_A 127 ELDL 130 (501)
T ss_dssp GGGG
T ss_pred HHHH
Confidence 7666
No 130
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=86.73 E-value=1 Score=47.26 Aligned_cols=71 Identities=15% Similarity=0.160 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|....+.++.++|.++|+++|+.|++++++|.++..+|.-+- +.++. ..+...++.++..+
T Consensus 55 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~~a~--------~ev~~~~~~l~~~a 122 (484)
T 3ifg_A 55 AIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKP----LAEAK--------GEIAYAASFIEWFA 122 (484)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHH--------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----HHHHH--------HHHHHHHHHHHHHH
Confidence 4567888999999999999999999999999999999998888775321 11111 45677778888777
Q ss_pred hCC
Q psy11677 446 ESS 448 (462)
Q Consensus 446 ~l~ 448 (462)
...
T Consensus 123 ~~~ 125 (484)
T 3ifg_A 123 EEG 125 (484)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 131
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=86.58 E-value=0.79 Score=48.27 Aligned_cols=46 Identities=13% Similarity=0.185 Sum_probs=41.8
Q ss_pred HHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHH
Q psy11677 366 FISGTRSGSR--VLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDL 411 (462)
Q Consensus 366 ~~~~Ar~As~--~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl 411 (462)
.++.|++|.+ ..+.++.++|.++|+++|+.|++++++|.+++.+|.
T Consensus 51 av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 98 (495)
T 3b4w_A 51 AVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAET 98 (495)
T ss_dssp HHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3457888888 799999999999999999999999999999998886
No 132
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=86.49 E-value=0.47 Score=50.18 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLS 412 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~ 412 (462)
.++.|++|.+..+.++.++|.++|+++|+.|++++++|.+++.+|.-
T Consensus 54 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 100 (506)
T 3rh9_A 54 AVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHG 100 (506)
T ss_dssp HHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 45578888888999999999999999999999999999999999864
No 133
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=86.17 E-value=1.2 Score=47.76 Aligned_cols=77 Identities=13% Similarity=0.079 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc-hHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISK-QADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQI 444 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~-~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~i 444 (462)
.++.|++|....+.++.++|.++|+++|+.|+++ ++++.++...|.- ..+.++..+++...-+.+...+..++++
T Consensus 105 Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~G----k~~~ea~~e~v~~~~~~~~~~a~~~~~~ 180 (563)
T 4e3x_A 105 AIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQG----KTVIQAEIDAAAELIDFFRFNAKFAVEL 180 (563)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHC----CCHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcC----CCHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 4557888889999999999999999999999999 9999999887642 2334455554544556667777777776
Q ss_pred Hh
Q psy11677 445 AE 446 (462)
Q Consensus 445 a~ 446 (462)
..
T Consensus 181 ~~ 182 (563)
T 4e3x_A 181 EG 182 (563)
T ss_dssp TT
T ss_pred hC
Confidence 65
No 134
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=86.02 E-value=1.1 Score=47.25 Aligned_cols=71 Identities=14% Similarity=0.160 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQIA 445 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ia 445 (462)
.++.|++|....+.++.++|.++|+++|+.|++++++|.+++..|.-+- +.++. ..+...++.++..+
T Consensus 75 Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~--------~ev~~~~~~~~~~a 142 (504)
T 3ek1_A 75 AIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKP----LAEAR--------GEVLYAASFIEWFA 142 (504)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHH--------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----HHHHH--------HHHHHHHHHHHHHH
Confidence 4557888999999999999999999999999999999998888875321 11111 24666677777777
Q ss_pred hCC
Q psy11677 446 ESS 448 (462)
Q Consensus 446 ~l~ 448 (462)
.+.
T Consensus 143 ~~~ 145 (504)
T 3ek1_A 143 EEA 145 (504)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 135
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=85.81 E-value=1.2 Score=46.92 Aligned_cols=46 Identities=11% Similarity=0.265 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDL 411 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl 411 (462)
.++.|++|....+.++.++|.++|+++|+.|++++++|.++...|.
T Consensus 68 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 113 (497)
T 3i44_A 68 AINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEM 113 (497)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3457888999999999999999999999999999999998888875
No 136
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=85.59 E-value=1.3 Score=46.98 Aligned_cols=74 Identities=15% Similarity=0.191 Sum_probs=56.6
Q ss_pred HHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHHH
Q psy11677 367 ISGTRSGS--RVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQI 444 (462)
Q Consensus 367 ~~~Ar~As--~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~i 444 (462)
.+.|++|. ...+.++.++|.++|+++|+.|++++++|.+++.+|.-+. +.++. .-+...++.++..
T Consensus 76 v~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~--------~ev~~~~~~~~~~ 143 (520)
T 3ed6_A 76 ILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKT----LEESY--------ADMDDIHNVFMYF 143 (520)
T ss_dssp HHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHH--------HHHHHHHHHHHHH
T ss_pred HHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----HHHHH--------HHHHHHHHHHHHH
Confidence 34677777 7789999999999999999999999999998888875321 11121 1377888888888
Q ss_pred HhCCCCCcc
Q psy11677 445 AESSHTNVG 453 (462)
Q Consensus 445 a~l~dDPvg 453 (462)
+... +++.
T Consensus 144 a~~~-~~~~ 151 (520)
T 3ed6_A 144 AGLA-DKDG 151 (520)
T ss_dssp HHHT-TSCC
T ss_pred HHHH-HHhc
Confidence 8877 4543
No 137
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=85.32 E-value=1.3 Score=46.67 Aligned_cols=45 Identities=16% Similarity=0.339 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHH
Q psy11677 367 ISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDL 411 (462)
Q Consensus 367 ~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl 411 (462)
.+.|++|....+.++.++|.++|+++|+.|++++++|.++...|.
T Consensus 50 v~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 94 (490)
T 2wme_A 50 VQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDT 94 (490)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 356888999999999999999999999999999999988777664
No 138
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=84.96 E-value=1.4 Score=46.39 Aligned_cols=46 Identities=11% Similarity=0.203 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDL 411 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl 411 (462)
..+.|++|....+.++.++|.++|+++|+.|++++++|.++..+|.
T Consensus 67 Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 112 (498)
T 4f3x_A 67 AVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNC 112 (498)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 3457888999999999999999999999999999999998877774
No 139
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=84.09 E-value=1.5 Score=46.68 Aligned_cols=46 Identities=15% Similarity=0.265 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDL 411 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl 411 (462)
.++.|++|....+.++.++|.++|+++|+.|++++++|.++..+|.
T Consensus 79 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 124 (538)
T 3qan_A 79 AIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEA 124 (538)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3457889999999999999999999999999999999998887774
No 140
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=83.97 E-value=1.4 Score=46.18 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLS 412 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~ 412 (462)
.++.|++|....+.++.++|.++|+++++.|++++++|.++..+|.-
T Consensus 39 av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 85 (486)
T 3pqa_A 39 AIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAG 85 (486)
T ss_dssp HHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45678888899999999999999999999999999999988887753
No 141
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=83.79 E-value=1.3 Score=46.19 Aligned_cols=46 Identities=20% Similarity=0.242 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDL 411 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl 411 (462)
..+.|++|.+..+.++.++|.++|+++|+.|++++++|.++...|.
T Consensus 33 av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 78 (474)
T 4h7n_A 33 QCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDT 78 (474)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3457899999999999999999999999999999999987776663
No 142
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=82.82 E-value=1.7 Score=45.99 Aligned_cols=72 Identities=17% Similarity=0.260 Sum_probs=52.8
Q ss_pred HHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHH
Q psy11677 366 FISGTRSGSR--VLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQ 443 (462)
Q Consensus 366 ~~~~Ar~As~--~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ 443 (462)
.++.|++|.. ..+.++.++|.++|+++|+.|++++++|.++..+|.-+- +.++.. ..+...++.++.
T Consensus 79 av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea~~-------~Ev~~~~~~~~~ 147 (517)
T 2o2p_A 79 AVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAV----YTLALK-------THVGMSIQTFRY 147 (517)
T ss_dssp HHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHHHH-------TTTHHHHHHHHH
T ss_pred HHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----HHHHHH-------HHHHHHHHHHHH
Confidence 3457888888 899999999999999999999999999998888875221 111211 125556667776
Q ss_pred HHhCC
Q psy11677 444 IAESS 448 (462)
Q Consensus 444 ia~l~ 448 (462)
.+...
T Consensus 148 ~a~~~ 152 (517)
T 2o2p_A 148 FAGWC 152 (517)
T ss_dssp HHHHG
T ss_pred HHHHH
Confidence 66554
No 143
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=82.25 E-value=1.7 Score=45.83 Aligned_cols=46 Identities=15% Similarity=0.163 Sum_probs=40.9
Q ss_pred HHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHH
Q psy11677 366 FISGTRSGSR-----VLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDL 411 (462)
Q Consensus 366 ~~~~Ar~As~-----~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl 411 (462)
.++.|++|.. ..+.++.++|.++|+++++.|++++++|.++..+|.
T Consensus 50 av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 100 (503)
T 3iwj_A 50 AVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDC 100 (503)
T ss_dssp HHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456788877 788999999999999999999999999999988886
No 144
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=80.64 E-value=2.7 Score=43.53 Aligned_cols=46 Identities=9% Similarity=0.060 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHH
Q psy11677 365 LFISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKD 410 (462)
Q Consensus 365 ~~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~D 410 (462)
..++.|++|.+..+.++.++|.++|+++|+.|+++++++.+.-.+|
T Consensus 11 ~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e 56 (452)
T 3my7_A 11 AMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEE 56 (452)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999987665444
No 145
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=80.49 E-value=2.5 Score=44.44 Aligned_cols=45 Identities=16% Similarity=0.177 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHH
Q psy11677 366 FISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKD 410 (462)
Q Consensus 366 ~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~D 410 (462)
.++.|++|....+.++.++|.++|+++|+.|++++++|.++-.+|
T Consensus 64 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e 108 (500)
T 2j6l_A 64 TVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLE 108 (500)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345788898999999999999999999999999999996444333
No 146
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=74.79 E-value=3.6 Score=47.20 Aligned_cols=72 Identities=18% Similarity=0.157 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHHHHHHHCCCChhhhhhcCCCHHHHHHHHHHHHH
Q psy11677 364 SLFISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDLSDATKNGVAKPLLSRLSLTPSKLKSLSTGLKQ 443 (462)
Q Consensus 364 ~~~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl~~a~~~gl~~~l~dRL~L~~~ri~~m~~~l~~ 443 (462)
...++.|++|....+.++.++|.++|+++|+.|++++++|.+++.+|.-+. +.++ ...+..+++.++.
T Consensus 553 ~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~----~~ea--------~~Ev~~ai~~lr~ 620 (1001)
T 3haz_A 553 HAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKT----LDDA--------LSELREAADFCRY 620 (1001)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCC----HHHH--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----hhHH--------HHHHHHHHHHHHH
Confidence 445677899999999999999999999999999999999998887774321 1122 1456666666666
Q ss_pred HHhC
Q psy11677 444 IAES 447 (462)
Q Consensus 444 ia~l 447 (462)
.+..
T Consensus 621 ~a~~ 624 (1001)
T 3haz_A 621 YAAQ 624 (1001)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 147
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=73.60 E-value=4.6 Score=46.43 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhchHHHHHhcHHHH
Q psy11677 364 SLFISGTRSGSRVLQGLNPEDRAKAIYNLADLLISKQADLLDANSKDL 411 (462)
Q Consensus 364 ~~~~~~Ar~As~~L~~ls~~~rn~aL~~iA~~L~~~~~~Il~AN~~Dl 411 (462)
...+..|++|....+.++.++|.++|+++|+.|++++++|.+++.+|.
T Consensus 571 ~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~ 618 (1026)
T 4f9i_A 571 GDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEI 618 (1026)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345667889999999999999999999999999999999998888774
No 148
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=38.88 E-value=40 Score=28.34 Aligned_cols=34 Identities=9% Similarity=0.236 Sum_probs=23.2
Q ss_pred HHHHcCCeEEEEeCCChhHHHHHHcCCccccccc
Q psy11677 105 WALDRGVSVVICNGMQKEAIKQIVAGRKIGTFFT 138 (462)
Q Consensus 105 ~a~~~Gv~v~I~sG~~~~~L~~~l~g~~~GT~I~ 138 (462)
...+.|+++.|++++....+..++..-+...+|.
T Consensus 47 ~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~ 80 (162)
T 2p9j_A 47 LLQKMGITLAVISGRDSAPLITRLKELGVEEIYT 80 (162)
T ss_dssp HHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhcc
Confidence 3345689999999988777777776544444553
No 149
>2hqh_E Restin; beta/BETA structure, zinc finger motif, structural protein, binding; 1.80A {Homo sapiens}
Probab=38.37 E-value=6.5 Score=24.90 Aligned_cols=11 Identities=45% Similarity=0.942 Sum_probs=9.5
Q ss_pred CCccccchhhh
Q psy11677 1 MFGHTTRLCEQ 11 (462)
Q Consensus 1 ~~~~~~~~~~~ 11 (462)
+|||+++-|.+
T Consensus 11 ~FGH~t~~C~d 21 (26)
T 2hqh_E 11 MFGHWATNCND 21 (26)
T ss_dssp EESSCGGGCCT
T ss_pred HhCcccccCCc
Confidence 59999999965
No 150
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=35.98 E-value=58 Score=28.62 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=34.4
Q ss_pred EEEecCcccccCCCC--CCCCcccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHH
Q psy11677 51 ILMSDVNGIYTKAPW--EEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIV 128 (462)
Q Consensus 51 IiLTDVdGVY~~dP~--~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l 128 (462)
++++|+||++++.-. .++++.+..++..+.. +...+.+.|+++.|++|. .....++
T Consensus 11 liv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~--------------------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l 68 (168)
T 3ewi_A 11 LLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAI--------------------GISLLKKSGIEVRLISER--ACSKQTL 68 (168)
T ss_dssp EEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHH--------------------HHHHHHHTTCEEEEECSS--CCCHHHH
T ss_pred EEEEeCccceECCcEEEcCCCCEEEEEecCcHH--------------------HHHHHHHCCCEEEEEeCc--HHHHHHH
Confidence 577899999886421 2344444444433221 233445679999999988 3455555
Q ss_pred c
Q psy11677 129 A 129 (462)
Q Consensus 129 ~ 129 (462)
.
T Consensus 69 ~ 69 (168)
T 3ewi_A 69 S 69 (168)
T ss_dssp H
T ss_pred H
Confidence 5
No 151
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=35.84 E-value=37 Score=29.49 Aligned_cols=67 Identities=18% Similarity=0.367 Sum_probs=38.8
Q ss_pred EEEecCcccccCCC-C-CCCCcccccccHHhHHhhhhcCCCCCCCCcchHHHHHHHHHHHcCCeEEEEeCCChhHHHHHH
Q psy11677 51 ILMSDVNGIYTKAP-W-EEGAKMIWTYTSEMRDTVQFGQKSKVGTGGMDSKVNSATWALDRGVSVVICNGMQKEAIKQIV 128 (462)
Q Consensus 51 IiLTDVdGVY~~dP-~-~p~AklI~~I~~~e~~~l~~~~~s~~gtGGM~~Kl~AA~~a~~~Gv~v~I~sG~~~~~L~~~l 128 (462)
++++|.||.+.... . .++.+.+..+..... .+...+.+.|++++|++|+....+..++
T Consensus 10 ~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~--------------------~~l~~L~~~G~~~~i~Tg~~~~~~~~~~ 69 (180)
T 1k1e_A 10 FVITDVDGVLTDGQLHYDANGEAIKSFHVRDG--------------------LGIKMLMDADIQVAVLSGRDSPILRRRI 69 (180)
T ss_dssp EEEEECTTTTSCSEEEEETTEEEEEEEEHHHH--------------------HHHHHHHHTTCEEEEEESCCCHHHHHHH
T ss_pred EEEEeCCCCcCCCCeeeccCcceeeeeccchH--------------------HHHHHHHHCCCeEEEEeCCCcHHHHHHH
Confidence 46789999776421 1 223344444443222 1233345679999999998877776666
Q ss_pred cCCcccccc
Q psy11677 129 AGRKIGTFF 137 (462)
Q Consensus 129 ~g~~~GT~I 137 (462)
..-+...+|
T Consensus 70 ~~lgl~~~~ 78 (180)
T 1k1e_A 70 ADLGIKLFF 78 (180)
T ss_dssp HHHTCCEEE
T ss_pred HHcCCceee
Confidence 543344455
No 152
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=28.33 E-value=32 Score=34.25 Aligned_cols=46 Identities=17% Similarity=0.468 Sum_probs=33.4
Q ss_pred HHHHHHHhc-CCCCccEEeecCC-hhHHHHHHhhCCCcceeeeccceeE
Q psy11677 258 REEISDLLS-MEKHIDLIIPRGS-SDLVRSIQQKSQHIPVLGHAEGICH 304 (462)
Q Consensus 258 r~~~~~ll~-~~~~iDliIPrG~-~~lv~~v~~~s~~iPvi~~~~G~ch 304 (462)
.|.+.+-.+ +..|+|.|+-|+. .+-++...++++ ||||--++|.-|
T Consensus 87 gEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~-vPVINag~~~~H 134 (328)
T 3grf_A 87 KETVQDTAEVFSRMVDICTARLATKEMMREMAQHAS-VPCINALDDFGH 134 (328)
T ss_dssp --CHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCS-SCEEESSCSSCC
T ss_pred CCCHHHHHHHHHhhCCEEEEecCChhHHHHHHHhCC-CCEEeCCCCCCC
Confidence 455555443 5678999999997 467888889995 999988887433
No 153
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=26.69 E-value=61 Score=29.92 Aligned_cols=28 Identities=18% Similarity=0.214 Sum_probs=20.8
Q ss_pred HHHHHHHcCCeEEEEeCCChhHHHHHHc
Q psy11677 102 SATWALDRGVSVVICNGMQKEAIKQIVA 129 (462)
Q Consensus 102 AA~~a~~~Gv~v~I~sG~~~~~L~~~l~ 129 (462)
+...+.+.|++++|++|+....+..++.
T Consensus 29 al~~l~~~G~~~~iaTGR~~~~~~~~~~ 56 (271)
T 1rlm_A 29 QYQELKKRGIKFVVASGNQYYQLISFFP 56 (271)
T ss_dssp HHHHHHHHTCEEEEECSSCHHHHGGGCT
T ss_pred HHHHHHHCCCEEEEEeCCcHHHHHHHHH
Confidence 3344556799999999999877766554
No 154
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=22.81 E-value=42 Score=33.88 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=29.1
Q ss_pred CCCCccEEeecCC-----------hhHHHHHHhhCCCcceeeeccce
Q psy11677 267 MEKHIDLIIPRGS-----------SDLVRSIQQKSQHIPVLGHAEGI 302 (462)
Q Consensus 267 ~~~~iDliIPrG~-----------~~lv~~v~~~s~~iPvi~~~~G~ 302 (462)
+..|+|+|+-|.. .+.++...+.++ ||||--++|.
T Consensus 122 Ls~y~D~IviR~~~~~~~~~~~~~~~~~~~lA~~~~-vPVINag~g~ 167 (359)
T 1zq6_A 122 LGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSP-VPVINMETIT 167 (359)
T ss_dssp HHHHCSEEEEECCCCSSCHHHHTTCHHHHHHHHHCS-SCEEESSSSC
T ss_pred HHHhCcEEEEeccccccccccccchHHHHHHHHhCC-CCEEeCCCCC
Confidence 3467999999988 456888888885 9999999987
No 155
>2pzo_E CAP-Gly domain-containing linker protein 1; structural protein microtubule binding, dynactin, cytoskeleton associated protein, P150glued; 2.60A {Homo sapiens} PDB: 3e2u_E
Probab=21.65 E-value=19 Score=25.25 Aligned_cols=11 Identities=45% Similarity=0.942 Sum_probs=9.6
Q ss_pred CCccccchhhh
Q psy11677 1 MFGHTTRLCEQ 11 (462)
Q Consensus 1 ~~~~~~~~~~~ 11 (462)
||||.+..|..
T Consensus 28 vFGH~t~~Cnd 38 (42)
T 2pzo_E 28 MFGHWATNCND 38 (42)
T ss_dssp EESSCGGGCCT
T ss_pred ccCcccccCCc
Confidence 69999999965
No 156
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=21.49 E-value=1.4e+02 Score=25.16 Aligned_cols=49 Identities=14% Similarity=0.194 Sum_probs=31.3
Q ss_pred CeEEeec-CHHHHH-HHhcCCCCccEEeecC---ChhHHHHHHhhCCCcceeeecc
Q psy11677 250 PLHSQVS-TREEIS-DLLSMEKHIDLIIPRG---SSDLVRSIQQKSQHIPVLGHAE 300 (462)
Q Consensus 250 ~~v~~v~-~r~~~~-~ll~~~~~iDliIPrG---~~~lv~~v~~~s~~iPvi~~~~ 300 (462)
+.+++++ +|+.+. ..+...+--=+|+.|| ++.+++...++ +||||.+..
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~--~ipvl~t~~ 106 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEER--GVPVILTGH 106 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHH--TCCEEECSS
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHC--CCeEEEECC
Confidence 5899995 787654 3333134334455555 36777777766 699997654
No 157
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=21.05 E-value=54 Score=32.45 Aligned_cols=46 Identities=22% Similarity=0.377 Sum_probs=32.8
Q ss_pred HHHHHHHhc-CCCCccEEeecCC-hhHHHHHHhhCCCcceeeeccceeE
Q psy11677 258 REEISDLLS-MEKHIDLIIPRGS-SDLVRSIQQKSQHIPVLGHAEGICH 304 (462)
Q Consensus 258 r~~~~~ll~-~~~~iDliIPrG~-~~lv~~v~~~s~~iPvi~~~~G~ch 304 (462)
.|.+.+-.+ +..|.|.|+-|+. .+-++...+.++ ||||--++|.-|
T Consensus 88 gEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~-vPVINa~~~~~H 135 (315)
T 1pvv_A 88 GETIADTARVLSRYVDAIMARVYDHKDVEDLAKYAT-VPVINGLSDFSH 135 (315)
T ss_dssp TCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCS-SCEEEEECSSCC
T ss_pred CcCHHHHHHHHHHhCcEEEEecCchHHHHHHHHhCC-CCEEcCCCCCCC
Confidence 344444442 5678999999984 567888888985 999986665433
No 158
>3e2u_E CAP-Gly domain-containing linker protein 1; structural protein microtubule binding, dynactin, cytoskelet associated protein, P150glued; 2.60A {Homo sapiens}
Probab=20.63 E-value=21 Score=25.14 Aligned_cols=11 Identities=45% Similarity=0.942 Sum_probs=9.7
Q ss_pred CCccccchhhh
Q psy11677 1 MFGHTTRLCEQ 11 (462)
Q Consensus 1 ~~~~~~~~~~~ 11 (462)
+|||.++-|..
T Consensus 28 VFGH~t~eC~d 38 (42)
T 3e2u_E 28 MFGHWATNCND 38 (42)
T ss_dssp EESSCGGGCCT
T ss_pred ecccccccCCc
Confidence 69999999975
No 159
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=20.30 E-value=1.5e+02 Score=27.28 Aligned_cols=23 Identities=22% Similarity=0.222 Sum_probs=18.2
Q ss_pred HHcCCeEEEEeCCChhHHHHHHc
Q psy11677 107 LDRGVSVVICNGMQKEAIKQIVA 129 (462)
Q Consensus 107 ~~~Gv~v~I~sG~~~~~L~~~l~ 129 (462)
.+.|++++|++|+....+..++.
T Consensus 31 ~~~Gi~v~iaTGR~~~~~~~~~~ 53 (268)
T 1nf2_A 31 LSRKCYVVFASGRMLVSTLNVEK 53 (268)
T ss_dssp HTTTSEEEEECSSCHHHHHHHHH
T ss_pred HhCCCEEEEECCCChHHHHHHHH
Confidence 56799999999998877666653
Done!