RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11678
(165 letters)
>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 436
Score = 57.2 bits (137), Expect = 7e-11
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 91 DVISAKSMKTEYGSLECAIEVVGDLQEAVDHIHTYGSSHTDVIVTEN 137
D + E+ SL+ A + V + A+ HI+T+ S HTD IVTEN
Sbjct: 319 DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTEN 365
Score = 52.5 bits (125), Expect = 3e-09
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 49 TFGPPPAKSMKTEYGSLECAIEVVGDLQEAVDHIHTYGSSHTDVISAKSMKT 100
T + E+ SL+ A + V + A+ HI+T+ S HTD I ++
Sbjct: 317 TVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKAN 368
>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase
{Thermotoga maritima [TaxId: 2336]}
Length = 414
Score = 43.9 bits (102), Expect = 2e-06
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 80 DHIHTYGSSHTDVISAKSMKTEYGSLECAIEVVGDLQEAVDHIHTYGSSHTDVIVTEN 137
+ TEY L AI+VV ++ EA++HI Y + H++ I+TEN
Sbjct: 288 CEKTREIVPDVVPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTEN 345
Score = 39.6 bits (91), Expect = 7e-05
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 52 PPPAKSMKTEYGSLECAIEVVGDLQEAVDHIHTYGSSHTDVISAKSMKT 100
P TEY L AI+VV ++ EA++HI Y + H++ I ++
Sbjct: 300 PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSN 348
>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Length = 494
Score = 33.5 bits (76), Expect = 0.008
Identities = 6/44 (13%), Positives = 12/44 (27%)
Query: 94 SAKSMKTEYGSLECAIEVVGDLQEAVDHIHTYGSSHTDVIVTEN 137
K E I ++E V + + T++
Sbjct: 386 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKD 429
Score = 31.5 bits (71), Expect = 0.043
Identities = 6/49 (12%), Positives = 11/49 (22%)
Query: 52 PPPAKSMKTEYGSLECAIEVVGDLQEAVDHIHTYGSSHTDVISAKSMKT 100
K E I ++E V + + K +
Sbjct: 384 QDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 432
>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Sheep (Ovis aries) [TaxId: 9940]}
Length = 494
Score = 33.5 bits (76), Expect = 0.009
Identities = 6/44 (13%), Positives = 12/44 (27%)
Query: 94 SAKSMKTEYGSLECAIEVVGDLQEAVDHIHTYGSSHTDVIVTEN 137
+ K E I L + + + + I T +
Sbjct: 386 DMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTND 429
Score = 31.5 bits (71), Expect = 0.035
Identities = 5/53 (9%), Positives = 12/53 (22%)
Query: 48 LTFGPPPAKSMKTEYGSLECAIEVVGDLQEAVDHIHTYGSSHTDVISAKSMKT 100
+ + K E I L + + + + I +
Sbjct: 380 FSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK 432
>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Streptococcus mutans [TaxId: 1309]}
Length = 474
Score = 28.7 bits (63), Expect = 0.37
Identities = 7/44 (15%), Positives = 14/44 (31%)
Query: 94 SAKSMKTEYGSLECAIEVVGDLQEAVDHIHTYGSSHTDVIVTEN 137
+ E I V ++EA++ + I T +
Sbjct: 369 DMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTND 412
>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Baltic cod (Gadus callarias) [TaxId: 8053]}
Length = 503
Score = 27.4 bits (60), Expect = 0.97
Identities = 4/44 (9%), Positives = 12/44 (27%)
Query: 94 SAKSMKTEYGSLECAIEVVGDLQEAVDHIHTYGSSHTDVIVTEN 137
+K E ++ +E + + + T +
Sbjct: 393 DMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRD 436
>d1tg7a1 b.149.1.1 (A:570-666) Beta-galactosidase LacA, domain 3
{Penicillium sp. [TaxId: 5081]}
Length = 97
Score = 24.8 bits (54), Expect = 2.6
Identities = 5/30 (16%), Positives = 11/30 (36%)
Query: 36 VKVYAGPNLTKKLTFGPPPAKSMKTEYGSL 65
++V P+ K L ++ + G
Sbjct: 61 IEVVGAPSGAKNLVINGKKTQTKVDKNGIW 90
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 262
Score = 25.4 bits (55), Expect = 3.5
Identities = 7/45 (15%), Positives = 21/45 (46%)
Query: 64 SLECAIEVVGDLQEAVDHIHTYGSSHTDVISAKSMKTEYGSLECA 108
+C ++ D+ EA++++ H D+ + + +E + +
Sbjct: 101 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS 145
>d1bg7a_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana)
[TaxId: 8400]}
Length = 173
Score = 25.4 bits (55), Expect = 3.6
Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 53 PPAKSMKTEYGSLECAIEVVGDLQEAVDHIHTYGSSHTDVISAKSMKTEYGSLECAIEVV 112
P +++ A+++ + +A+ +H GS D ++TEY E ++ +
Sbjct: 84 PERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLETEY--PEEQVKSI 141
Query: 113 GDLQEAVDHIHTYGSSH 129
L + + ++ G
Sbjct: 142 KQLGDYITNLKRLGLPQ 158
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2
{Cow (Bos taurus) [TaxId: 9913]}
Length = 364
Score = 25.5 bits (55), Expect = 4.1
Identities = 15/94 (15%), Positives = 36/94 (38%), Gaps = 3/94 (3%)
Query: 66 ECAIEVVGDLQEAVDHIHTYGSSHTDVISAKSMKTEYGSLECA---IEVVGDLQEAVDHI 122
++ ++H+H + D+ A + E+G + + + ++ +
Sbjct: 107 ADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV 166
Query: 123 HTYGSSHTDVIVTENARDSKCDYPAACNAMETLL 156
T+G +V+ A DS D+ + + LL
Sbjct: 167 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 200
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 24.2 bits (52), Expect = 8.4
Identities = 9/42 (21%), Positives = 15/42 (35%)
Query: 64 SLECAIEVVGDLQEAVDHIHTYGSSHTDVISAKSMKTEYGSL 105
A L V ++H G +H D+ + E +L
Sbjct: 101 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNL 142
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 24.4 bits (52), Expect = 9.2
Identities = 7/40 (17%), Positives = 16/40 (40%)
Query: 64 SLECAIEVVGDLQEAVDHIHTYGSSHTDVISAKSMKTEYG 103
SL+ + + + +++IH+ H DV +
Sbjct: 101 SLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK 140
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.313 0.128 0.373
Gapped
Lambda K H
0.267 0.0481 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 586,178
Number of extensions: 24849
Number of successful extensions: 79
Number of sequences better than 10.0: 1
Number of HSP's gapped: 79
Number of HSP's successfully gapped: 17
Length of query: 165
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 86
Effective length of database: 1,322,926
Effective search space: 113771636
Effective search space used: 113771636
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 49 (23.3 bits)