Query psy11679
Match_columns 78
No_of_seqs 103 out of 637
Neff 3.8
Searched_HMMs 46136
Date Fri Aug 16 16:05:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11679.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11679hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4165|consensus 100.0 1.1E-32 2.5E-37 218.2 6.4 77 2-78 342-429 (433)
2 COG0014 ProA Gamma-glutamyl ph 100.0 5.9E-29 1.3E-33 197.9 5.4 59 2-60 348-417 (417)
3 TIGR00407 proA gamma-glutamyl 99.4 2.2E-13 4.8E-18 106.0 2.9 48 2-49 340-398 (398)
4 PLN02418 delta-1-pyrroline-5-c 99.4 5.7E-13 1.2E-17 110.5 4.7 73 2-77 633-716 (718)
5 TIGR01092 P5CS delta l-pyrroli 99.3 4E-12 8.6E-17 105.2 5.6 74 2-78 627-711 (715)
6 TIGR02518 EutH_ACDH acetaldehy 99.0 2.4E-10 5.3E-15 90.9 3.1 51 2-57 377-447 (488)
7 PRK00197 proA gamma-glutamyl p 98.5 2.2E-07 4.8E-12 72.2 4.7 59 2-60 348-417 (417)
8 PRK13805 bifunctional acetalde 97.8 1.5E-05 3.2E-10 67.3 2.6 51 2-57 382-453 (862)
9 cd07079 ALDH_F18-19_ProA-GPR G 97.7 6E-05 1.3E-09 58.6 5.2 54 2-55 342-406 (406)
10 PRK15398 aldehyde dehydrogenas 97.4 7.2E-05 1.6E-09 59.6 2.1 47 2-52 398-451 (465)
11 cd07077 ALDH-like NAD(P)+-depe 97.3 0.00029 6.3E-09 54.1 4.0 52 2-53 334-397 (397)
12 cd07150 ALDH_VaniDH_like Pseud 95.0 0.017 3.6E-07 44.8 2.3 48 2-52 392-450 (451)
13 cd07152 ALDH_BenzADH NAD-depen 94.8 0.022 4.7E-07 44.3 2.5 50 2-52 383-442 (443)
14 cd07104 ALDH_BenzADH-like ALDH 93.5 0.052 1.1E-06 41.7 2.2 49 2-52 372-430 (431)
15 cd07099 ALDH_DDALDH Methylomon 93.3 0.065 1.4E-06 41.6 2.4 50 2-53 393-453 (453)
16 cd06534 ALDH-SF NAD(P)+-depend 92.0 0.13 2.8E-06 38.5 2.4 47 2-52 308-366 (367)
17 cd07120 ALDH_PsfA-ACA09737 Pse 89.3 0.27 5.8E-06 38.9 2.1 47 2-52 397-454 (455)
18 cd07151 ALDH_HBenzADH NADP+-de 86.1 0.67 1.5E-05 36.4 2.6 50 2-53 404-463 (465)
19 PLN02278 succinic semialdehyde 85.1 0.73 1.6E-05 36.9 2.4 50 2-55 436-496 (498)
20 cd07110 ALDH_F10_BADH Arabidop 84.4 0.61 1.3E-05 36.4 1.7 48 2-53 398-456 (456)
21 cd07078 ALDH NAD(P)+ dependent 83.7 0.8 1.7E-05 34.9 2.0 47 2-52 373-431 (432)
22 cd07105 ALDH_SaliADH Salicylal 81.3 1.2 2.6E-05 34.6 2.3 49 2-52 373-431 (432)
23 cd07082 ALDH_F11_NP-GAPDH NADP 81.0 1.3 2.9E-05 34.7 2.4 48 2-53 413-472 (473)
24 cd07119 ALDH_BADH-GbsA Bacillu 80.6 1.2 2.6E-05 35.1 2.0 52 2-55 414-474 (482)
25 cd07088 ALDH_LactADH-AldA Esch 75.0 2 4.3E-05 33.6 1.8 51 2-52 410-467 (468)
26 PLN02467 betaine aldehyde dehy 73.5 2.2 4.9E-05 34.4 1.8 51 2-54 429-488 (503)
27 cd07103 ALDH_F5_SSADH_GabD Mit 71.7 2.5 5.5E-05 32.7 1.6 47 2-52 393-450 (451)
28 cd07090 ALDH_F9_TMBADH NAD+-de 70.6 3.2 6.9E-05 32.5 2.0 51 2-56 396-457 (457)
29 PRK11905 bifunctional proline 65.2 3.7 8E-05 37.2 1.5 51 2-53 956-1017(1208)
30 cd07089 ALDH_CddD-AldA-like Rh 63.0 4.9 0.00011 31.6 1.7 49 2-52 401-458 (459)
31 cd07100 ALDH_SSADH1_GabD1 Myco 62.5 5.4 0.00012 31.1 1.8 47 2-52 371-428 (429)
32 PF10290 DUF2403: Glycine-rich 61.6 3.5 7.6E-05 26.0 0.6 16 33-48 47-62 (65)
33 cd07121 ALDH_EutE Ethanolamine 61.1 6.7 0.00015 31.1 2.2 45 2-50 368-419 (429)
34 cd07114 ALDH_DhaS Uncharacteri 57.8 6.9 0.00015 30.6 1.7 47 2-52 399-456 (457)
35 PRK11809 putA trifunctional tr 57.1 5.5 0.00012 36.7 1.2 48 2-50 1053-1111(1318)
36 cd07091 ALDH_F1-2_Ald2-like AL 56.6 7.8 0.00017 30.6 1.8 49 2-52 418-475 (476)
37 TIGR01722 MMSDH methylmalonic 54.4 13 0.00028 29.5 2.7 53 2-54 414-476 (477)
38 cd07143 ALDH_AldA_AN0554 Asper 51.7 10 0.00022 30.3 1.8 50 2-53 421-479 (481)
39 cd07118 ALDH_SNDH Gluconobacte 48.7 11 0.00025 29.6 1.6 49 2-52 396-453 (454)
40 PLN02203 aldehyde dehydrogenas 46.2 19 0.0004 29.2 2.5 53 2-56 382-445 (484)
41 cd07122 ALDH_F20_ACDH Coenzyme 45.5 20 0.00043 28.7 2.6 32 2-33 368-401 (436)
42 PRK09406 gabD1 succinic semial 45.4 16 0.00035 28.9 2.0 51 2-54 398-457 (457)
43 TIGR02299 HpaE 5-carboxymethyl 43.0 21 0.00047 28.3 2.4 52 2-55 418-478 (488)
44 cd07139 ALDH_AldA-Rv0768 Mycob 42.9 19 0.0004 28.3 2.0 49 2-52 414-470 (471)
45 cd07106 ALDH_AldA-AAD23400 Str 42.8 20 0.00043 28.0 2.2 49 2-52 388-445 (446)
46 PRK11241 gabD succinate-semial 40.2 19 0.00042 28.9 1.7 49 2-54 422-481 (482)
47 cd07116 ALDH_ACDHII-AcoD Ralst 39.9 22 0.00047 28.2 2.0 48 2-53 419-477 (479)
48 cd07094 ALDH_F21_LactADH-like 39.4 25 0.00054 27.4 2.2 49 2-52 394-452 (453)
49 cd07142 ALDH_F2BC Arabidosis a 39.3 23 0.00049 28.1 2.0 49 2-52 418-475 (476)
50 TIGR03216 OH_muco_semi_DH 2-hy 38.8 23 0.0005 28.1 2.0 48 2-53 421-479 (481)
51 cd07132 ALDH_F3AB Aldehyde deh 38.4 26 0.00057 27.7 2.2 54 2-55 366-428 (443)
52 cd07138 ALDH_CddD_SSP0762 Rhod 38.1 28 0.0006 27.4 2.3 49 2-52 409-465 (466)
53 cd07131 ALDH_AldH-CAJ73105 Unc 37.7 33 0.00071 27.0 2.7 49 2-53 415-475 (478)
54 PRK09847 gamma-glutamyl-gamma- 37.3 28 0.00061 27.9 2.3 50 2-53 433-491 (494)
55 cd07144 ALDH_ALD2-YMR170C Sacc 36.4 26 0.00056 27.8 1.9 48 2-53 424-482 (484)
56 cd07092 ALDH_ABALDH-YdcW Esche 35.5 36 0.00077 26.5 2.5 49 2-52 392-449 (450)
57 PLN00412 NADP-dependent glycer 35.5 38 0.00082 27.3 2.7 49 2-54 427-487 (496)
58 cd07083 ALDH_P5CDH ALDH subfam 35.4 39 0.00085 27.1 2.8 50 2-53 437-498 (500)
59 PLN02174 aldehyde dehydrogenas 34.9 33 0.00072 27.9 2.4 52 2-55 383-445 (484)
60 cd07125 ALDH_PutA-P5CDH Delta( 34.9 41 0.00089 27.1 2.9 50 2-53 445-506 (518)
61 cd07087 ALDH_F3-13-14_CALDH-li 34.9 24 0.00052 27.6 1.5 51 2-52 366-425 (426)
62 PRK13968 putative succinate se 34.5 30 0.00065 27.5 2.0 48 2-53 401-459 (462)
63 cd07135 ALDH_F14-YMR110C Sacch 33.6 22 0.00049 28.0 1.2 49 2-52 376-435 (436)
64 PRK09407 gabD2 succinic semial 32.0 45 0.00098 27.0 2.7 53 2-56 429-493 (524)
65 PRK13252 betaine aldehyde dehy 31.2 45 0.00097 26.6 2.5 51 2-54 421-480 (488)
66 cd07107 ALDH_PhdK-like Nocardi 29.9 39 0.00084 26.5 1.9 50 2-53 396-454 (456)
67 cd07101 ALDH_SSADH2_GabD2 Myco 29.7 38 0.00082 26.6 1.9 51 2-52 393-453 (454)
68 cd07134 ALDH_AlkH-like Pseudom 29.7 29 0.00062 27.3 1.2 51 2-52 373-432 (433)
69 cd07559 ALDH_ACDHII_AcoD-like 29.7 38 0.00083 27.0 1.9 49 2-53 420-478 (480)
70 cd07097 ALDH_KGSADH-YcbD Bacil 29.6 47 0.001 26.3 2.4 49 2-52 413-472 (473)
71 TIGR01237 D1pyr5carbox2 delta- 29.6 61 0.0013 26.1 3.0 51 2-52 448-508 (511)
72 cd07093 ALDH_F8_HMSADH Human a 27.4 48 0.001 25.8 2.0 49 2-52 397-454 (455)
73 cd07145 ALDH_LactADH_F420-Bios 27.2 52 0.0011 25.7 2.2 49 2-52 397-455 (456)
74 cd07115 ALDH_HMSADH_HapE Pseud 27.1 56 0.0012 25.6 2.4 48 2-53 393-451 (453)
75 PRK10090 aldehyde dehydrogenas 26.5 60 0.0013 25.5 2.5 48 2-53 348-406 (409)
76 TIGR01238 D1pyr5carbox3 delta- 26.3 31 0.00068 27.9 0.9 49 2-50 442-500 (500)
77 cd07108 ALDH_MGR_2402 Magnetos 26.2 55 0.0012 25.6 2.2 18 2-19 398-415 (457)
78 cd07109 ALDH_AAS00426 Uncharac 26.1 51 0.0011 25.8 2.0 51 2-52 395-453 (454)
79 cd07098 ALDH_F15-22 Aldehyde d 26.0 76 0.0016 24.9 2.9 49 2-52 403-462 (465)
80 cd07137 ALDH_F3FHI Plant aldeh 26.0 46 0.001 26.3 1.7 51 2-52 372-431 (432)
81 PLN02419 methylmalonate-semial 25.6 70 0.0015 27.1 2.8 61 2-62 527-597 (604)
82 cd07102 ALDH_EDX86601 Uncharac 25.6 54 0.0012 25.5 2.0 49 2-52 394-451 (452)
83 cd07112 ALDH_GABALDH-PuuC Esch 25.5 45 0.00097 26.3 1.6 48 2-52 404-461 (462)
84 cd07117 ALDH_StaphAldA1 Unchar 25.4 49 0.0011 26.4 1.8 49 2-52 415-472 (475)
85 PRK03137 1-pyrroline-5-carboxy 25.3 79 0.0017 25.5 2.9 49 2-52 451-511 (514)
86 cd07085 ALDH_F6_MMSDH Methylma 24.8 75 0.0016 25.2 2.7 49 2-53 415-476 (478)
87 cd07141 ALDH_F1AB_F2_RALDH1 NA 24.3 57 0.0012 25.9 2.0 47 2-52 422-479 (481)
88 PLN02466 aldehyde dehydrogenas 24.1 63 0.0014 26.6 2.2 48 2-53 472-530 (538)
89 PF13061 DUF3923: Protein of u 24.0 23 0.00051 22.0 -0.2 12 8-19 22-33 (66)
90 PRK13473 gamma-aminobutyraldeh 23.7 65 0.0014 25.4 2.2 49 2-54 414-473 (475)
91 cd07147 ALDH_F21_RNP123 Aldehy 22.8 68 0.0015 25.0 2.1 49 2-52 393-451 (452)
92 cd07086 ALDH_F7_AASADH-like NA 22.0 83 0.0018 25.0 2.5 50 2-53 414-475 (478)
93 cd07124 ALDH_PutA-P5CDH-RocA D 21.9 99 0.0022 24.9 2.9 48 2-52 449-509 (512)
94 cd07148 ALDH_RL0313 Uncharacte 21.3 72 0.0016 25.1 2.0 51 2-52 396-454 (455)
95 PRK11904 bifunctional proline 20.7 78 0.0017 28.5 2.3 52 2-54 964-1026(1038)
No 1
>KOG4165|consensus
Probab=99.97 E-value=1.1e-32 Score=218.22 Aligned_cols=77 Identities=56% Similarity=0.934 Sum_probs=74.6
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEEcCceeeccccCCCccee
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGDGHVASEFAEGGPCTF 70 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~G~~~~~~~~~~~~~~ 70 (78)
|+..|+.|+++||||||| |||+||||||||+|||||||||||+|+||||+++|+||++.+|.++|.+.|
T Consensus 342 ~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~gqvvsd~~~~G~~~y 421 (433)
T KOG4165|consen 342 NEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGKGQVVSDFNEGGKRAY 421 (433)
T ss_pred CHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEecCCceeccccCCCceee
Confidence 788999999999999999 999999999999999999999999999999999999999999998889999
Q ss_pred eeccCCCC
Q psy11679 71 VHEHLPIN 78 (78)
Q Consensus 71 ~h~~l~~~ 78 (78)
+|++||++
T Consensus 422 ~H~~l~i~ 429 (433)
T KOG4165|consen 422 LHEDLPID 429 (433)
T ss_pred eecCCChh
Confidence 99999974
No 2
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=99.95 E-value=5.9e-29 Score=197.90 Aligned_cols=59 Identities=36% Similarity=0.625 Sum_probs=57.0
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEEcCceeec
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGDGHVAS 60 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~G~~~~ 60 (78)
|...+++|+++||||+|| +||+|+||||||||+|||||||||+||||||+|+|+||+|+
T Consensus 348 ~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~Gqvr~ 417 (417)
T COG0014 348 DYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGDGQVRP 417 (417)
T ss_pred CHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCCceecC
Confidence 567899999999999999 99999999999999999999999999999999999999985
No 3
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=99.37 E-value=2.2e-13 Score=105.97 Aligned_cols=48 Identities=40% Similarity=0.535 Sum_probs=45.7
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTK 49 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K 49 (78)
|.+.+++|.+++|+..|+ .||+|.|+||||||+|+|||++||.|||+|
T Consensus 340 d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 340 NKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred CHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 567899999999999998 799999999999999999999999999987
No 4
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=99.36 E-value=5.7e-13 Score=110.49 Aligned_cols=73 Identities=45% Similarity=0.775 Sum_probs=67.5
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEEcCceeeccccCCCccee
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGDGHVASEFAEGGPCTF 70 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~G~~~~~~~~~~~~~~ 70 (78)
|.+.|.+|.+++|+..|+ .||..-+.||||+|.|+|||.||++++++|||+.|+||+|+ + ...+.|
T Consensus 633 d~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g~~~~--~-~~~~~~ 709 (718)
T PLN02418 633 DSEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNGQVVD--G-DKGVVY 709 (718)
T ss_pred CHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCCeecC--C-CCCccc
Confidence 567899999999999998 69999999999999999999999999999999999999996 3 456789
Q ss_pred eeccCCC
Q psy11679 71 VHEHLPI 77 (78)
Q Consensus 71 ~h~~l~~ 77 (78)
+|.+||+
T Consensus 710 ~~~~~~~ 716 (718)
T PLN02418 710 THKDLPL 716 (718)
T ss_pred ccccccC
Confidence 9999997
No 5
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=99.29 E-value=4e-12 Score=105.22 Aligned_cols=74 Identities=47% Similarity=0.758 Sum_probs=67.9
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEEcCceeeccccCCCccee
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGDGHVASEFAEGGPCTF 70 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~G~~~~~~~~~~~~~~ 70 (78)
|.+.+++|.+++||..|+ .||.+.+-||+++++|.+||.+|+++++.|+|+.|+||+|+ ++ -.+.|
T Consensus 627 d~~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g~~~~--~~-~~~~~ 703 (715)
T TIGR01092 627 DENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKGQVVS--GD-HGLVY 703 (715)
T ss_pred CHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCCeecC--CC-CCcce
Confidence 678899999999999998 68999999999999999999999999999999999999997 43 45789
Q ss_pred eeccCCCC
Q psy11679 71 VHEHLPIN 78 (78)
Q Consensus 71 ~h~~l~~~ 78 (78)
+|.+||++
T Consensus 704 ~~~~~~~~ 711 (715)
T TIGR01092 704 THKDLPIP 711 (715)
T ss_pred ecccCCcc
Confidence 99999975
No 6
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=98.99 E-value=2.4e-10 Score=90.91 Aligned_cols=51 Identities=20% Similarity=0.119 Sum_probs=47.3
Q ss_pred ChHHHHHHhcCCCceeee--------------------cCCCeeeEEeecCCcccccccccccceEEEEEEEcCce
Q psy11679 2 NTHYQVDLIGTPDQACLA--------------------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGDGH 57 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--------------------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~G~ 57 (78)
|.+.+++|.+++|++.|| +||+|+|+||||+ | |||++.|+++|||++|--+
T Consensus 377 d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~--~---~v~~~~l~~~k~v~~~~~~ 447 (488)
T TIGR02518 377 NKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS--D---NITPENLINIRRVAYGVRE 447 (488)
T ss_pred CHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC--C---CCCHHHhheeeEEEecccc
Confidence 567899999999999998 8999999999999 4 9999999999999999833
No 7
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=98.46 E-value=2.2e-07 Score=72.23 Aligned_cols=59 Identities=36% Similarity=0.602 Sum_probs=55.7
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEEcCceeec
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGDGHVAS 60 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~G~~~~ 60 (78)
|.+.+++|.+++++..|+ .||++-+-|++++|++.+||.||++++..|++..|+||+|.
T Consensus 348 d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~~~~~~ 417 (417)
T PRK00197 348 DYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGDGQIRA 417 (417)
T ss_pred CHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECCCeeCc
Confidence 677899999999999998 68999999999999999999999999999999999999983
No 8
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=97.77 E-value=1.5e-05 Score=67.28 Aligned_cols=51 Identities=18% Similarity=0.056 Sum_probs=46.2
Q ss_pred ChHHHHHHhcCCCceeee---------------------cCCCeeeEEeecCCcccccccccccceEEEEEEEcCce
Q psy11679 2 NTHYQVDLIGTPDQACLA---------------------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGDGH 57 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------------------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~G~ 57 (78)
|.+.+++|.+++|+++|+ .||+|.+.|+||+ ||+|++.|+++|||++..-.
T Consensus 382 d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~G~~g~~~~~-----g~~g~~~~~~~k~v~~~~~~ 453 (862)
T PRK13805 382 DDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGCGSWGGNSVS-----ENVGAKHLLNIKTVAKRREN 453 (862)
T ss_pred CHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccccCCCCCcCC-----CCCCHHHhheeeeeeecccc
Confidence 678899999999999998 6999999999997 99999999999999976533
No 9
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=97.73 E-value=6e-05 Score=58.57 Aligned_cols=54 Identities=39% Similarity=0.618 Sum_probs=50.0
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEEcC
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGD 55 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~ 55 (78)
|.+.+++|.+++++..|+ .||.+-+.|+|+++.+.+|+-+|++++..|.+++||
T Consensus 342 d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~~ 406 (406)
T cd07079 342 NYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRGD 406 (406)
T ss_pred CHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeCC
Confidence 678899999999999998 477778999999999999999999999999999996
No 10
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=97.43 E-value=7.2e-05 Score=59.55 Aligned_cols=47 Identities=21% Similarity=0.325 Sum_probs=41.3
Q ss_pred ChHHHHHHhcCCCceeee-------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|++.|+ .+|+|.+ +.|| +|.|||+| ++||+.|-+-
T Consensus 398 d~~~a~~~a~~l~~G~V~iN~~~~~~~p~gg~-~~s~--~~~~~~~g-~~~~~~~~~~ 451 (465)
T PRK15398 398 NVDNLNKMARAIQTSIFVKNGPSYAGLGLGGE-GFTT--FTIATPTG-EGVTSARTFT 451 (465)
T ss_pred CHHHHHHHHHhCCceEEEECCCCccccCcCCC-CCce--eeecccCC-CCccchhhhh
Confidence 678899999999999999 5788887 8888 99999999 9999988553
No 11
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=97.31 E-value=0.00029 Score=54.10 Aligned_cols=52 Identities=17% Similarity=0.112 Sum_probs=47.6
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCccccc-ccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARG-PVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRG-PvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++|+..|+ .+++|..-+|++++++.+| +.|+++++..|++++
T Consensus 334 d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~~ 397 (397)
T cd07077 334 KINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLVR 397 (397)
T ss_pred CHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEeeC
Confidence 578899999999999998 4778888889999999999 999999999999974
No 12
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=95.02 E-value=0.017 Score=44.78 Aligned_cols=48 Identities=15% Similarity=0.306 Sum_probs=41.3
Q ss_pred ChHHHHHHhcCCCceeee----------cCCCeeeEEeecCCcccc-cccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA----------GLPERAEVGISTARIHAR-GPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~----------~~G~GaEvGIST~K~HaR-GPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ +++|| |+..+.++.+ ||-||++++..|+|.
T Consensus 392 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfg---G~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 392 DLQRAFKLAERLESGMVHINDPTILDEAHVPFG---GVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcC---CccccccCcCCcHHHHHHhheeeEEe
Confidence 567799999999999998 34555 8888888877 999999999999985
No 13
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=94.82 E-value=0.022 Score=44.25 Aligned_cols=50 Identities=20% Similarity=0.234 Sum_probs=43.5
Q ss_pred ChHHHHHHhcCCCceeee----------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|...+.+|.+++++..|+ +++||. +|.|....+..||.||++++..|++.
T Consensus 383 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG-~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 383 DVGRAMALADRLRTGMLHINDQTVNDEPHNPFGG-MGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCC-cccccCCCccCcHHHHHHhhceeEEe
Confidence 567899999999999998 466777 89998776889999999999999985
No 14
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=93.52 E-value=0.052 Score=41.65 Aligned_cols=49 Identities=12% Similarity=0.195 Sum_probs=39.8
Q ss_pred ChHHHHHHhcCCCceeee----------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ .++||.. +.|. -...+||.||++++..|++.
T Consensus 372 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~-~~SG-~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 372 DLERAMAFAERLETGMVHINDQTVNDEPHVPFGGV-KASG-GGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCCc-cccc-CCccchHHHHHHhhceeEEe
Confidence 568899999999999998 4556654 7776 33468999999999999985
No 15
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=93.30 E-value=0.065 Score=41.56 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=41.9
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|...+++|.+++++..|+ .++||.. |.|- ..+..|+.+|++++..|++.+
T Consensus 393 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~-~~SG-~g~~~g~~~~~~~t~~k~v~~ 453 (453)
T cd07099 393 DLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGV-KDSG-GGRRHGAEGLREFCRPKAIAR 453 (453)
T ss_pred CHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCc-cccc-CCccChHHHHHHhcceEEEeC
Confidence 567899999999999998 4556663 7777 778999999999999999864
No 16
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=91.96 E-value=0.13 Score=38.49 Aligned_cols=47 Identities=19% Similarity=0.242 Sum_probs=39.7
Q ss_pred ChHHHHHHhcCCCceeee------------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA------------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~------------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|...+++|.+++|++.|| .||..-+-|+.+ .+||.+++.++..|+++
T Consensus 308 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~----~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 308 DLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGR----EGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCC----CChHHHHHHhceEEEEe
Confidence 567899999999999999 466666777654 38999999999999986
No 17
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=89.26 E-value=0.27 Score=38.90 Aligned_cols=47 Identities=13% Similarity=0.215 Sum_probs=39.1
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ .||.--+-|+ ++.| ||.+|++++..|+|.
T Consensus 397 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~--G~~~--g~~~l~~ft~~k~v~ 454 (455)
T cd07120 397 DLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGL--GRLH--GVAALEDFIEYKHIY 454 (455)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccccc--Cccc--hHHHHHHHhceeEEe
Confidence 567899999999999998 5666667776 4545 999999999999985
No 18
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=86.06 E-value=0.67 Score=36.45 Aligned_cols=50 Identities=20% Similarity=0.246 Sum_probs=38.8
Q ss_pred ChHHHHHHhcCCCceeee----------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++++..|+ .++||..-...++| ..||-+|++++..|++..
T Consensus 404 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~--~~g~~~l~~~t~~k~~~~ 463 (465)
T cd07151 404 DLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGR--FNGEWALEEFTTDKWISV 463 (465)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCc--CChHHHHHHhhceEEEEe
Confidence 567789999999999998 34555544444455 469999999999999864
No 19
>PLN02278 succinic semialdehyde dehydrogenase
Probab=85.08 E-value=0.73 Score=36.93 Aligned_cols=50 Identities=12% Similarity=0.181 Sum_probs=38.0
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEEcC
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGD 55 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~ 55 (78)
|.+.+++|.+++|+..|+ .||.--+=|+ ....||-||++++..|.|..++
T Consensus 436 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~G~~~l~~ft~~k~i~~~~ 496 (498)
T PLN02278 436 DLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGL----GREGSKYGIDEYLEIKYVCLGN 496 (498)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcC----CccchHHHHHHhheeEEEEEec
Confidence 567899999999999999 2332222333 3457999999999999998764
No 20
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=84.41 E-value=0.61 Score=36.42 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=35.0
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCee--eEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERA--EVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~Ga--EvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++|+..|+ ++.||. .=|+ ....||-||+.++..|++.+
T Consensus 398 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~~~~k~i~~ 456 (456)
T cd07110 398 DAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGI----GRELGEWGLDNYLEVKQITR 456 (456)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccC----CccchHHHHHHhcceeEEeC
Confidence 567899999999999998 222332 2222 22448999999999999863
No 21
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=83.73 E-value=0.8 Score=34.95 Aligned_cols=47 Identities=17% Similarity=0.186 Sum_probs=37.9
Q ss_pred ChHHHHHHhcCCCceeee------------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA------------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~------------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|...+++|.+++++..|+ .||...+-|+ .+.+||.|++.++..|.|.
T Consensus 373 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~----g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 373 DLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGI----GREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCcCcC----CccchHHHHHHhhceEEEE
Confidence 456789999999999998 4555555554 4689999999999999885
No 22
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=81.33 E-value=1.2 Score=34.62 Aligned_cols=49 Identities=16% Similarity=0.314 Sum_probs=36.6
Q ss_pred ChHHHHHHhcCCCceeee----------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|++.+++|++++++..|+ .++||..=...+++ ..|+-||++++..|.|.
T Consensus 373 d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~--~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 373 DLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGR--FNGKWGIDEFTETKWIT 431 (432)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccccc--cChHHHHHHhhceEEEe
Confidence 567799999999999998 34444433223333 57999999999999885
No 23
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=80.99 E-value=1.3 Score=34.70 Aligned_cols=48 Identities=13% Similarity=0.109 Sum_probs=39.2
Q ss_pred ChHHHHHHhcCCCceeee------------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA------------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~------------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++++..|+ .||.--+-||... .|+-||+.++..|++..
T Consensus 413 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~----~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 413 DINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQ----GIGDALRSMTRRKGIVI 472 (473)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCC----ChHHHHHHhhceeEEEE
Confidence 677899999999999998 4666667777654 47789999999999853
No 24
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=80.57 E-value=1.2 Score=35.11 Aligned_cols=52 Identities=13% Similarity=0.028 Sum_probs=36.0
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEEEcC
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGD 55 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~ 55 (78)
|.+.+++|.+++++..|+ ...||. ++. +.-...-||.||++++..|++....
T Consensus 414 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG-~k~-SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 414 DIARANRVARRLRAGTVWINDYHPYFAEAPWGG-YKQ-SGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCcCC-ccc-CcCCccchHHHHHHHhceEEEEEec
Confidence 567899999999999998 222221 011 1112234999999999999998753
No 25
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=74.99 E-value=2 Score=33.62 Aligned_cols=51 Identities=20% Similarity=0.048 Sum_probs=34.3
Q ss_pred ChHHHHHHhcCCCceeee--cCCC----eeeEEeec-CCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--GLPE----RAEVGIST-ARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~G~----GaEvGIST-~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ .... +..=|+.. .-....||.||+.++..|.|.
T Consensus 410 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 410 NLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 567899999999999999 1100 01112222 222357999999999999874
No 26
>PLN02467 betaine aldehyde dehydrogenase
Probab=73.51 E-value=2.2 Score=34.36 Aligned_cols=51 Identities=16% Similarity=0.026 Sum_probs=36.4
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEEEc
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNG 54 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G 54 (78)
|.+.+++|.+++++..|+ ...||- ++-| .-...-|+.||++++..|++..-
T Consensus 429 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG-~k~S-G~G~~~G~~~l~~ft~~k~i~~~ 488 (503)
T PLN02467 429 DLERCERVSEAFQAGIVWINCSQPCFCQAPWGG-IKRS-GFGRELGEWGLENYLSVKQVTKY 488 (503)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCC-cccC-cCCCcchHHHHHHhhCeEEEEEe
Confidence 567889999999999998 222222 1111 12334589999999999999984
No 27
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=71.66 E-value=2.5 Score=32.73 Aligned_cols=47 Identities=19% Similarity=0.187 Sum_probs=35.0
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ .||.--+=| -....||.+|+.++..|.+.
T Consensus 393 d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG----~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 393 DLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESG----LGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCc----CCccchHHHHHHHhceeEEe
Confidence 567799999999999998 233222223 23456999999999999885
No 28
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=70.58 E-value=3.2 Score=32.45 Aligned_cols=51 Identities=16% Similarity=0.124 Sum_probs=36.6
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCee--eEEeecCCcccccccccccceEEEEEEEcCc
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERA--EVGISTARIHARGPVGVEGLLTTKWVLNGDG 56 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~Ga--EvGIST~K~HaRGPvGLe~L~t~K~vv~G~G 56 (78)
|.+.+++|.+++|+..|+ .+.||- .=|+ ....|+-|+++++..|.+....|
T Consensus 396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~----G~~~g~~~~~~f~~~k~~~~~~~ 457 (457)
T cd07090 396 DLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGF----GRENGTAALEHYTQLKTVYVEMG 457 (457)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcC----CccchHHHHHHHhCeEEEEEeCC
Confidence 577899999999999999 222322 3332 22458899999999998876443
No 29
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=65.19 E-value=3.7 Score=37.25 Aligned_cols=51 Identities=16% Similarity=0.070 Sum_probs=40.8
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
+.+.+++|.+++++..|| ...||.+ |.|-..-++.||-+|..+++.|.+-.
T Consensus 956 d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~-~~SG~G~kaGGp~~L~~f~~~k~v~~ 1017 (1208)
T PRK11905 956 IDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGE-GLSGTGPKAGGPLYLGRLVREAPTPI 1017 (1208)
T ss_pred CHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCC-CCCCCCCcCCCHHHHHHHhhcceeec
Confidence 567899999999999999 2235554 67865557999999999999998753
No 30
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=63.02 E-value=4.9 Score=31.64 Aligned_cols=49 Identities=16% Similarity=0.120 Sum_probs=33.5
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ ...||- ++-| .-.-..||-||+.++..|+|.
T Consensus 401 d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG-~k~S-G~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 401 DVDRAYRVARRIRTGSVGINGGGGYGPDAPFGG-YKQS-GLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCC-cccc-cCCCCchHHHHHHhhceeEEe
Confidence 567899999999999998 122221 1111 112235899999999999886
No 31
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=62.51 E-value=5.4 Score=31.10 Aligned_cols=47 Identities=15% Similarity=0.164 Sum_probs=34.5
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCee--eEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERA--EVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~Ga--EvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ .+.||. .=|+ ..--||-+|++++..|.|.
T Consensus 371 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~----G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 371 DLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGY----GRELGRFGIREFVNIKTVW 428 (429)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccccc----CCcchHHHHHHhcceeEEe
Confidence 567889999999999998 234443 2232 2234899999999999875
No 32
>PF10290 DUF2403: Glycine-rich protein domain (DUF2403); InterPro: IPR018807 This domain is found N-terminal to IPR018805 from INTERPRO. The function of this glycine-rich domain is unknown.
Probab=61.60 E-value=3.5 Score=25.98 Aligned_cols=16 Identities=25% Similarity=0.596 Sum_probs=12.3
Q ss_pred CcccccccccccceEE
Q psy11679 33 RIHARGPVGVEGLLTT 48 (78)
Q Consensus 33 K~HaRGPvGLe~L~t~ 48 (78)
-+|-||||-|.++--|
T Consensus 47 SvhFRGPl~L~qfavY 62 (65)
T PF10290_consen 47 SVHFRGPLNLKQFAVY 62 (65)
T ss_pred EEEEeCCcEEEEEEEE
Confidence 4699999999876543
No 33
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=61.09 E-value=6.7 Score=31.08 Aligned_cols=45 Identities=22% Similarity=0.347 Sum_probs=30.3
Q ss_pred ChHHHHHHhcCCCceeee-------cCCCeeeEEeecCCcccccccccccceEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-------GLPERAEVGISTARIHARGPVGVEGLLTTKW 50 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~ 50 (78)
|.+.+++|.+++|++.|+ .+++| |.--+++.--||=| ++|++.|-
T Consensus 368 d~~~a~~~a~~l~aG~v~iN~~~~~~~p~g---G~k~s~~~~~~~~~-~~~~~~~~ 419 (429)
T cd07121 368 NVENLTKMARAMQTTIFVKNGPSYAGLGVG---GEGYTTFTIAGPTG-EGLTSART 419 (429)
T ss_pred CHHHHHHHHhhCCceEEEEcCCCcCccccC---CCccceEEecCCcC-cCccChhh
Confidence 678899999999999999 22222 44444444566666 67766553
No 34
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=57.76 E-value=6.9 Score=30.63 Aligned_cols=47 Identities=11% Similarity=0.005 Sum_probs=32.7
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ .||.--+=| -....|+-+++..+..|.+.
T Consensus 399 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG----~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 399 DLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSG----IGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCc----CCccchHHHHHHHhceeEEe
Confidence 677899999999999998 232211212 22245888898888888774
No 35
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=57.13 E-value=5.5 Score=36.68 Aligned_cols=48 Identities=25% Similarity=0.239 Sum_probs=39.9
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKW 50 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~ 50 (78)
|++.+++|.+++++..|| ...||-+ |.|-.--++.||.+|..+++.+-
T Consensus 1053 d~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~-g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1053 IDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGE-GLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred CHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCc-CcCCCCCCCCCHHHHHHHhccCC
Confidence 678899999999999999 2246665 88887778999999999998873
No 36
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=56.61 E-value=7.8 Score=30.56 Aligned_cols=49 Identities=14% Similarity=0.068 Sum_probs=31.8
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ ...||- ++-| .-..--|+-|+++++..|.+.
T Consensus 418 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG-~k~S-G~G~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 418 DINKALRVSRALKAGTVWVNTYNVFDAAVPFGG-FKQS-GFGRELGEEGLEEYTQVKAVT 475 (476)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCcCC-cccC-cCCccchHHHHHHhhceeEEe
Confidence 567899999999999998 222221 1111 122335778888888888764
No 37
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=54.45 E-value=13 Score=29.49 Aligned_cols=53 Identities=9% Similarity=-0.079 Sum_probs=35.0
Q ss_pred ChHHHHHHhcCCCceeee--c-C-C---CeeeEEeecCCcc---cccccccccceEEEEEEEc
Q psy11679 2 NTHYQVDLIGTPDQACLA--G-L-P---ERAEVGISTARIH---ARGPVGVEGLLTTKWVLNG 54 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~-~-G---~GaEvGIST~K~H---aRGPvGLe~L~t~K~vv~G 54 (78)
|.+.+++|.+++|++.|+ . . + .-+.=|+-.+-+. .-|+-+|+..+..|.+...
T Consensus 414 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 414 DGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476 (477)
T ss_pred CHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence 567789999999999999 1 1 0 0011233222233 2389999999999988653
No 38
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=51.72 E-value=10 Score=30.28 Aligned_cols=50 Identities=14% Similarity=0.040 Sum_probs=34.3
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+.+|.+++++..|+ ...||. ++-| .-....|+-+|+.++..|.|..
T Consensus 421 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG-~k~S-G~G~~~G~~~l~~~t~~k~i~~ 479 (481)
T cd07143 421 NINNAIRVANALKAGTVWVNCYNLLHHQVPFGG-YKQS-GIGRELGEYALENYTQIKAVHI 479 (481)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCC-cccc-ccCcccHHHHHHHHhCeEEEEE
Confidence 566789999999999998 222222 1111 2234568889999999998864
No 39
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=48.73 E-value=11 Score=29.59 Aligned_cols=49 Identities=16% Similarity=0.054 Sum_probs=32.6
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|...+++|.+++++..|+ .+.||.. + .+.-....|+-+|++++..|.+.
T Consensus 396 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~-~-~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 396 DIDTALTVARRIRAGTVWVNTFLDGSPELPFGGF-K-QSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCc-c-cccCCcCchHHHHHHHhceeEEe
Confidence 567889999999999998 1222210 0 11223355888999999888764
No 40
>PLN02203 aldehyde dehydrogenase
Probab=46.23 E-value=19 Score=29.23 Aligned_cols=53 Identities=15% Similarity=0.176 Sum_probs=37.2
Q ss_pred ChHHHHHHhcCCCceeee--c---------CCCeeeEEeecCCcccccccccccceEEEEEEEcCc
Q psy11679 2 NTHYQVDLIGTPDQACLA--G---------LPERAEVGISTARIHARGPVGVEGLLTTKWVLNGDG 56 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~---------~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~G 56 (78)
|.+.+++|++++++..|+ . +.||.. + .+.-....|+-+|++++..|.|....-
T Consensus 382 d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~-k-~SG~Gr~~g~~~l~~ft~~k~v~~~~~ 445 (484)
T PLN02203 382 NEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGV-G-ESGFGRYHGKYSFDTFSHEKAVLRRSL 445 (484)
T ss_pred CHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCc-C-cccCCccccHHHHHHhcceeEEEEcCc
Confidence 567889999999999998 1 122211 1 112233468999999999999998753
No 41
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=45.49 E-value=20 Score=28.72 Aligned_cols=32 Identities=3% Similarity=-0.084 Sum_probs=25.9
Q ss_pred ChHHHHHHhcCCCceeee--cCCCeeeEEeecCC
Q psy11679 2 NTHYQVDLIGTPDQACLA--GLPERAEVGISTAR 33 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~G~GaEvGIST~K 33 (78)
|.+.+++|.+++|+.+|+ ..-..++||+++.-
T Consensus 368 d~~~a~~~~~~l~aG~V~IN~~~~~~~~g~~~~~ 401 (436)
T cd07122 368 DEEVIEEFALRMPVSRILVNTPSSLGGIGDTYNG 401 (436)
T ss_pred CHHHHHHHHhhCCceEEEEeCCccccccCccCCC
Confidence 567899999999999999 33345789998863
No 42
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=45.42 E-value=16 Score=28.95 Aligned_cols=51 Identities=20% Similarity=0.124 Sum_probs=34.3
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEEEc
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNG 54 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G 54 (78)
|.+.+++|++++++..|+ .+.||. ++-| .-..--|+-+|++++..|.|..|
T Consensus 398 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG-~k~S-G~G~~~g~~~l~~~t~~k~v~~~ 457 (457)
T PRK09406 398 DEAEQERFIDDLEAGQVFINGMTVSYPELPFGG-VKRS-GYGRELSAHGIREFCNIKTVWIG 457 (457)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCC-cccc-ccCccchHHHHHHhhceEEEEeC
Confidence 456789999999999998 222222 1111 11223478899999999998765
No 43
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=42.95 E-value=21 Score=28.26 Aligned_cols=52 Identities=13% Similarity=-0.062 Sum_probs=36.3
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEEEcC
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGD 55 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~ 55 (78)
|.+.+++|.+++|+..|+ ...||- ++-| .-...-|+-|+++++..|.+..-.
T Consensus 418 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG-~k~S-G~G~~~g~~~~~~~~~~k~i~~~~ 478 (488)
T TIGR02299 418 DVGRAHRVALALEAGMIWVNSQNVRHLPTPFGG-VKAS-GIGREGGTYSFDFYTETKNVALAL 478 (488)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCC-CccC-cCCccchHHHHHHHhceEEEEEec
Confidence 567899999999999999 222221 1111 123356899999999999987743
No 44
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=42.87 E-value=19 Score=28.34 Aligned_cols=49 Identities=18% Similarity=0.239 Sum_probs=34.1
Q ss_pred ChHHHHHHhcCCCceeee--------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ .+.||- ++-| .-....|+-||+.++..|.|.
T Consensus 414 d~~~~~~~~~~l~~G~v~iN~~~~~~~~PfgG-~k~S-G~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 414 DVERGLAVARRIRTGTVGVNGFRLDFGAPFGG-FKQS-GIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCC-cccc-cCCccchHHHHHHHhceeEEe
Confidence 567899999999999998 233332 1112 223466888898888888775
No 45
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=42.83 E-value=20 Score=27.97 Aligned_cols=49 Identities=10% Similarity=-0.037 Sum_probs=33.9
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ .+.||- ++-| +-....|+-|+++++..|.|.
T Consensus 388 d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG-~~~S-G~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 388 DLERAEAVARRLEAGTVWINTHGALDPDAPFGG-HKQS-GIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred CHHHHHHHHHhCCccEEEECCCCCCCCCCCCCC-cccc-ccCccchHHHHHHhhceeEEe
Confidence 567899999999999998 222222 1212 223356899999999988774
No 46
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=40.15 E-value=19 Score=28.91 Aligned_cols=49 Identities=12% Similarity=0.138 Sum_probs=34.9
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEEc
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNG 54 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G 54 (78)
|.+.+++|.+++|+..|+ -||.--+=|+ ..--|+-||++++..|.|..|
T Consensus 422 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 422 DLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGL----GREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred CHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCcccccc----CcccHHHHHHHhhcceEEEEe
Confidence 577899999999999998 1222112222 234588899999999998765
No 47
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=39.92 E-value=22 Score=28.21 Aligned_cols=48 Identities=10% Similarity=-0.008 Sum_probs=33.8
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++|+..|+ .||.=-+=|+ ...-|+-+|++.+..|.+..
T Consensus 419 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~~~~k~~~~ 477 (479)
T cd07116 419 DGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGI----GRENHKMMLDHYQQTKNLLV 477 (479)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcC----CccChHHHHHHhhceEEEEE
Confidence 567789999999999998 2322112222 23357889999999998865
No 48
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=39.38 E-value=25 Score=27.41 Aligned_cols=49 Identities=14% Similarity=0.052 Sum_probs=33.2
Q ss_pred ChHHHHHHhcCCCceeee----------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ ...||. ++-|= -...-|+-||+.++..|.|.
T Consensus 394 d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG-~~~SG-~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 394 DLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGG-VKESG-VGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCC-ccccc-cCcCChHHHHHHHhceeEEe
Confidence 567889999999999998 112222 22221 23456888898888888774
No 49
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=39.26 E-value=23 Score=28.11 Aligned_cols=49 Identities=16% Similarity=0.127 Sum_probs=32.4
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ .+.||. ++-| .-....|+-||+.++..|.++
T Consensus 418 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG-~k~S-G~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 418 NIDTANTLSRALKAGTVWVNCYDVFDASIPFGG-YKMS-GIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCC-CccC-cCCccchHHHHHHhhheeEEe
Confidence 567789999999999998 222322 1111 122345788888888888764
No 50
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=38.78 E-value=23 Score=28.08 Aligned_cols=48 Identities=10% Similarity=-0.078 Sum_probs=33.4
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++|+..|+ -||.--+=|+ ....|+-||++++..|-|..
T Consensus 421 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~f~~~k~v~~ 479 (481)
T TIGR03216 421 DLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGI----GREGGVHSLEFYTELTNVCI 479 (481)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcC----CcCchHHHHHHhhceEEEEE
Confidence 567899999999999999 2322122222 23458888999988887753
No 51
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=38.36 E-value=26 Score=27.66 Aligned_cols=54 Identities=7% Similarity=0.043 Sum_probs=36.0
Q ss_pred ChHHHHHHhcCCCceeee--cCCCe------eeEEee-cCCcccccccccccceEEEEEEEcC
Q psy11679 2 NTHYQVDLIGTPDQACLA--GLPER------AEVGIS-TARIHARGPVGVEGLLTTKWVLNGD 55 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~G~G------aEvGIS-T~K~HaRGPvGLe~L~t~K~vv~G~ 55 (78)
|.+.+++|.+++++..|+ ....+ +.=|+- +.-..--|+-||++++..|.+....
T Consensus 366 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 366 NKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred CHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEcc
Confidence 567899999999999999 11111 111221 1222345888999999999998764
No 52
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=38.15 E-value=28 Score=27.43 Aligned_cols=49 Identities=16% Similarity=0.125 Sum_probs=31.7
Q ss_pred ChHHHHHHhcCCCceeee--------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ .+.||. ++.|- -...-|+-+++..+..|.|+
T Consensus 409 d~~~a~~~~~~l~~G~v~iN~~~~~~~~PfgG-~k~SG-~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 409 DPERARAVARRLRAGQVHINGAAFNPGAPFGG-YKQSG-NGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCcCC-ccccc-CCccchHHHHHHhcceeEEe
Confidence 567899999999999998 222332 22222 12234777788887777654
No 53
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=37.67 E-value=33 Score=27.04 Aligned_cols=49 Identities=12% Similarity=0.087 Sum_probs=32.7
Q ss_pred ChHHHHHHhcCCCceeee----------cCCCee--eEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA----------GLPERA--EVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~----------~~G~Ga--EvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++|+..|+ .+.||. +=|+.. ..-|+-||++.+..|.|..
T Consensus 415 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~---~~~g~~~~~~f~~~k~i~~ 475 (478)
T cd07131 415 DVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH---REAGTTALDAFTEWKAVYV 475 (478)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCC---cCCcHHHHHHhhheEEEEE
Confidence 567899999999999999 112221 112110 2237888999998888754
No 54
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=37.33 E-value=28 Score=27.94 Aligned_cols=50 Identities=8% Similarity=-0.030 Sum_probs=33.9
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++|+..|+ .+.||. ++-| .-....|+-||+.++..|.|..
T Consensus 433 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG-~k~S-G~G~~~g~~~l~~ft~~k~v~~ 491 (494)
T PRK09847 433 DLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGG-YKQS-GNGRDKSLHALEKFTELKTIWI 491 (494)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCC-Cccc-ccCccchHHHHHHhhceEEEEE
Confidence 567899999999999998 222221 1222 1233467888999999888764
No 55
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=36.43 E-value=26 Score=27.77 Aligned_cols=48 Identities=17% Similarity=0.052 Sum_probs=33.3
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++++..|+ -||.--+=|+ ..--|+-||++.+..|.|..
T Consensus 424 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~t~~k~v~~ 482 (484)
T cd07144 424 DIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGI----GRELGEYGLETYTQTKAVHI 482 (484)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcC----CCCchHHHHHHhhceEEEEE
Confidence 567899999999999998 1221112222 23457888999998888754
No 56
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=35.52 E-value=36 Score=26.49 Aligned_cols=49 Identities=12% Similarity=0.059 Sum_probs=32.1
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ .+.||.. + .+.-...-|+-+++..+..|.+.
T Consensus 392 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~-~-~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 392 DVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGF-K-QSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCc-c-cCcCCCCChHHHHHHHheeeEEe
Confidence 566789999999999998 2223221 1 11122345788888888888764
No 57
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=35.51 E-value=38 Score=27.26 Aligned_cols=49 Identities=6% Similarity=0.058 Sum_probs=36.4
Q ss_pred ChHHHHHHhcCCCceeee------------cCCCeeeEEeecCCcccccccccccceEEEEEEEc
Q psy11679 2 NTHYQVDLIGTPDQACLA------------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNG 54 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~------------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G 54 (78)
|.+.+++|.+++|+..|+ .||.=-.-||.. --|+-|+++.+..|.+..-
T Consensus 427 d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~i~~~ 487 (496)
T PLN00412 427 DINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGS----QGITNSINMMTKVKSTVIN 487 (496)
T ss_pred CHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCC----CChHHHHHHhcceEEEEEe
Confidence 567899999999999998 242222355543 2578999999999988763
No 58
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=35.45 E-value=39 Score=27.07 Aligned_cols=50 Identities=16% Similarity=0.046 Sum_probs=33.2
Q ss_pred ChHHHHHHhcCCCceeee--cC---------CCeeeEEeecCCc-ccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--GL---------PERAEVGISTARI-HARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~---------G~GaEvGIST~K~-HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++|+..|+ .. .||- ++-|- -. ..-|+-+|+.++..|.+..
T Consensus 437 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG-~k~SG-~G~~~~g~~~l~~~~~~k~~~~ 498 (500)
T cd07083 437 KREHLEEARREFHVGNLYINRKITGALVGVQPFGG-FKLSG-TNAKTGGPHYLRRFLEMKAVAE 498 (500)
T ss_pred CHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCc-ccccc-CCCcccCHHHHHHhhheeEEEE
Confidence 567899999999999998 11 2221 12221 11 2347889999999888753
No 59
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=34.92 E-value=33 Score=27.95 Aligned_cols=52 Identities=19% Similarity=0.208 Sum_probs=36.1
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEEcC
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNGD 55 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~ 55 (78)
|.+.+++|.+++++..|+ ...||- ++ ...-..-.|+-||++.+..|.|....
T Consensus 383 d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG-~k-~SG~Gr~~G~~gl~~ft~~K~v~~~~ 445 (484)
T PLN02174 383 NKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGG-VG-ESGMGAYHGKFSFDAFSHKKAVLYRS 445 (484)
T ss_pred CHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCC-cC-ccccCccchHHHHHHhcceEEEEECC
Confidence 567789999999999998 112221 11 11223346899999999999998763
No 60
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=34.92 E-value=41 Score=27.15 Aligned_cols=50 Identities=18% Similarity=-0.009 Sum_probs=34.3
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCc-ccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARI-HARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~-HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++|+..|+ ...||. ++-|- -. ..-|+-+++.++..|.+..
T Consensus 445 d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG-~~~SG-~G~~~gg~~~~~~ft~~k~i~~ 506 (518)
T cd07125 445 DEREIEYWRERVEAGNLYINRNITGAIVGRQPFGG-WGLSG-TGPKAGGPNYLLRFGNEKTVSL 506 (518)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCC-ccccc-CCcccccHHHHHHhcceEEEEE
Confidence 567799999999999998 112222 12222 11 2346999999999998876
No 61
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=34.89 E-value=24 Score=27.57 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=32.3
Q ss_pred ChHHHHHHhcCCCceeee--cC------CCeeeEEeec-CCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--GL------PERAEVGIST-ARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~------G~GaEvGIST-~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ .. +..+.=|+-. .-....|+=+|++.+..|.++
T Consensus 366 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 366 DKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 566789999999999998 11 1111112211 222345788888888888775
No 62
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=34.46 E-value=30 Score=27.51 Aligned_cols=48 Identities=6% Similarity=0.036 Sum_probs=33.4
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCee--eEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERA--EVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~Ga--EvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++++..|+ ++.||. +=|+ ..-.|+=||++.+..|-|..
T Consensus 401 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~G~~~l~~ft~~k~v~~ 459 (462)
T PRK13968 401 DETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGF----GRELSHFGLHEFCNIQTVWK 459 (462)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccc----CcCchHHHHHHhcceeEEEE
Confidence 567899999999999998 222222 1122 23458888999988887754
No 63
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=33.60 E-value=22 Score=28.05 Aligned_cols=49 Identities=14% Similarity=0.140 Sum_probs=31.8
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ .+.||. ++-| .-.-..|+=||+.++..|.|+
T Consensus 376 d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG-~k~S-G~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 376 DKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGG-VGDS-GYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred CHHHHHHHHhcCCcCeEEECCccccccCCCCCcCC-cCcc-cCCccccHhHHHHhccccccc
Confidence 577899999999999998 112221 1111 222245788888888888764
No 64
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=32.01 E-value=45 Score=27.01 Aligned_cols=53 Identities=9% Similarity=0.011 Sum_probs=36.8
Q ss_pred ChHHHHHHhcCCCceeee--c----------CCCeeeEEeecCCcccccccccccceEEEEEEEcCc
Q psy11679 2 NTHYQVDLIGTPDQACLA--G----------LPERAEVGISTARIHARGPVGVEGLLTTKWVLNGDG 56 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~----------~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G~G 56 (78)
|.+.+++|.+++|+..|+ . ..||. ++-| +-....|+-||+.++..|-|.....
T Consensus 429 d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG-~k~S-G~G~~~g~~~l~~ft~~k~v~~~~~ 493 (524)
T PRK09407 429 DTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGG-MKDS-GLGRRHGAEGLLKYTESQTIATQRV 493 (524)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCC-cccc-ccCccchHHHHHHhCCeEEEEEccc
Confidence 578899999999999998 1 12222 1111 1122358999999999999987643
No 65
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=31.18 E-value=45 Score=26.55 Aligned_cols=51 Identities=14% Similarity=-0.005 Sum_probs=35.2
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEEEc
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLNG 54 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~G 54 (78)
|.+.+++|.+++|+..|+ .+.||- ++-| +-....|+=|+++++..|-|...
T Consensus 421 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG-~k~S-G~G~~~g~~~~~~ft~~k~i~~~ 480 (488)
T PRK13252 421 DLSRAHRVIHQLEAGICWINTWGESPAEMPVGG-YKQS-GIGRENGIATLEHYTQIKSVQVE 480 (488)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCCCCCCCCC-CccC-cCCcCChHHHHHHhcceEEEEEe
Confidence 567899999999999999 222221 1111 12234588999999999988764
No 66
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=29.92 E-value=39 Score=26.52 Aligned_cols=50 Identities=12% Similarity=-0.087 Sum_probs=33.9
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++++..|+ .+.||- ++=| .-....|+-|+++++..|.|..
T Consensus 396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG-~k~S-G~G~~~g~~~~~~~~~~k~v~~ 454 (456)
T cd07107 396 DISQAHRTARRVEAGYVWINGSSRHFLGAPFGG-VKNS-GIGREECLEELLSYTQEKNVNV 454 (456)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCC-cccc-cCCcCchHHHHHHhhceEEEEE
Confidence 567789999999999998 222221 1111 1223468889999999998764
No 67
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=29.73 E-value=38 Score=26.55 Aligned_cols=51 Identities=10% Similarity=-0.009 Sum_probs=32.6
Q ss_pred ChHHHHHHhcCCCceeee--cCCCe-------eeEEee-cCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--GLPER-------AEVGIS-TARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~G~G-------aEvGIS-T~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ ....+ +.=|+- +.-....|+-|+++++..|.+.
T Consensus 393 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 393 DGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA 453 (454)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence 567889999999999998 11111 111221 1223345888888888888774
No 68
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=29.72 E-value=29 Score=27.31 Aligned_cols=51 Identities=10% Similarity=0.107 Sum_probs=32.0
Q ss_pred ChHHHHHHhcCCCceeee--cCCCe------eeEEee-cCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--GLPER------AEVGIS-TARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~G~G------aEvGIS-T~K~HaRGPvGLe~L~t~K~vv 52 (78)
|++.+++|.+++++..|+ ....+ +.=|+- ++-.-.-||=+|++.+..|.++
T Consensus 373 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 373 DKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred CHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 567889999999999998 11111 111221 1112245788888888888775
No 69
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=29.69 E-value=38 Score=26.98 Aligned_cols=49 Identities=10% Similarity=0.022 Sum_probs=32.9
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCC-cccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTAR-IHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K-~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++++..|+ .+.|| |+-.+- ..--|+-||++.+..|.+..
T Consensus 420 d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfG---G~k~SG~G~~~g~~~~~~~~~~k~v~~ 478 (480)
T cd07559 420 DINRALRVARGIQTGRVWVNCYHQYPAHAPFG---GYKKSGIGRETHKMMLDHYQQTKNILV 478 (480)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCcC---CCccCcCCccChHHHHHHhhceEEEEE
Confidence 567899999999999998 22222 111111 12347889999999888764
No 70
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=29.64 E-value=47 Score=26.25 Aligned_cols=49 Identities=14% Similarity=0.036 Sum_probs=31.7
Q ss_pred ChHHHHHHhcCCCceeee----------cCCCeeeEEeecCCc-ccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA----------GLPERAEVGISTARI-HARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~----------~~G~GaEvGIST~K~-HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ .+.||- ++-| .-. ..-|+-||++.+..|.|.
T Consensus 413 d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG-~~~S-G~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 413 SLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGG-RKGS-SYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCC-cccc-cCcccCCcHHHHHHhhceeEEe
Confidence 567889999999999998 112221 1111 112 234788888888888764
No 71
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=29.62 E-value=61 Score=26.14 Aligned_cols=51 Identities=14% Similarity=-0.009 Sum_probs=34.0
Q ss_pred ChHHHHHHhcCCCceeee--cCCCe------eeEEeecCCcc--cccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--GLPER------AEVGISTARIH--ARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~G~G------aEvGIST~K~H--aRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ ....+ +.=|+-.+-+. .-||-+|++++..|.|.
T Consensus 448 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~ 508 (511)
T TIGR01237 448 TRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVT 508 (511)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEE
Confidence 677899999999999998 11111 11122222222 35899999999999875
No 72
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=27.37 E-value=48 Score=25.80 Aligned_cols=49 Identities=14% Similarity=-0.029 Sum_probs=31.1
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|++++++..|+ ...||. ++-| .-....|+-|++..+..|-+.
T Consensus 397 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG-~~~S-G~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 397 DLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGG-VKAS-GIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCC-CccC-cCCCCchHHHHHHHhceeEEe
Confidence 567789999999999998 223332 1221 112235777777777777653
No 73
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=27.24 E-value=52 Score=25.74 Aligned_cols=49 Identities=6% Similarity=-0.008 Sum_probs=32.5
Q ss_pred ChHHHHHHhcCCCceeee----------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ ...||.. + .++-....|+-||++++..|.|.
T Consensus 397 d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~-~-~SG~G~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 397 DINRALKVARELEAGGVVINDSTRFRWDNLPFGGF-K-KSGIGREGVRYTMLEMTEEKTIV 455 (456)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCc-c-cccCCcCchHHHHHHhhceeEEe
Confidence 567889999999999998 1112210 0 11223456888888888888774
No 74
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=27.06 E-value=56 Score=25.55 Aligned_cols=48 Identities=8% Similarity=-0.004 Sum_probs=33.5
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++++..|+ .||.--+=|+ ....|+-|+++++..|-+..
T Consensus 393 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~----G~~~g~~~~~~f~~~k~~~~ 451 (453)
T cd07115 393 DLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGF----GREMGREALDEYTEVKSVWV 451 (453)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccC----CcCchHHHHHHhhceEEEEE
Confidence 567899999999999998 2322222222 23468888888888888754
No 75
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=26.47 E-value=60 Score=25.54 Aligned_cols=48 Identities=21% Similarity=0.070 Sum_probs=33.3
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++++..|+ -||.=-+=|+ ....|+-||++++..|.+..
T Consensus 348 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~----G~~~g~~gl~~f~~~k~v~~ 406 (409)
T PRK10090 348 NLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGI----GGADGKHGLHEYLQTQVVYL 406 (409)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccC----CccchHHHHHHhcceEEEEE
Confidence 567899999999999998 1222112222 23568888888888887743
No 76
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=26.30 E-value=31 Score=27.91 Aligned_cols=49 Identities=10% Similarity=-0.126 Sum_probs=29.0
Q ss_pred ChHHHHHHhcCCCceeee--cCCCe------eeEEeecC-Cc-ccccccccccceEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--GLPER------AEVGISTA-RI-HARGPVGVEGLLTTKW 50 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~G~G------aEvGIST~-K~-HaRGPvGLe~L~t~K~ 50 (78)
|.+.+++|.+++|+..|+ ....+ +.=|+..+ -. ..-|+-+|++.+..||
T Consensus 442 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 442 IETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQY 500 (500)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhcC
Confidence 567899999999999998 11111 11122221 12 2456667777766665
No 77
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=26.21 E-value=55 Score=25.61 Aligned_cols=18 Identities=0% Similarity=-0.044 Sum_probs=16.1
Q ss_pred ChHHHHHHhcCCCceeee
Q psy11679 2 NTHYQVDLIGTPDQACLA 19 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~ 19 (78)
|.+.+++|.+++|+..|+
T Consensus 398 d~~~a~~~~~~l~~g~v~ 415 (457)
T cd07108 398 DLGRALRAAHALEAGWVQ 415 (457)
T ss_pred CHHHHHHHHHhcCcceEE
Confidence 567899999999999998
No 78
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=26.12 E-value=51 Score=25.77 Aligned_cols=51 Identities=10% Similarity=0.006 Sum_probs=31.3
Q ss_pred ChHHHHHHhcCCCceeee--cCC--Cee---eEEeecC-CcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--GLP--ERA---EVGISTA-RIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~G--~Ga---EvGIST~-K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ ... .+. .=|+-.+ -....|+-++++++..|.|.
T Consensus 395 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 395 DGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 567899999999999998 221 111 0111111 12244778888888887664
No 79
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=26.00 E-value=76 Score=24.91 Aligned_cols=49 Identities=22% Similarity=0.186 Sum_probs=33.1
Q ss_pred ChHHHHHHhcCCCceeee--c---------CCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--G---------LPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~---------~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ . ..||. ++-| .-...-||=+|++++..|.+.
T Consensus 403 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG-~k~S-G~G~~~g~~~~~~~~~~k~~~ 462 (465)
T cd07098 403 DIKRARRIASQLETGMVAINDFGVNYYVQQLPFGG-VKGS-GFGRFAGEEGLRGLCNPKSVT 462 (465)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCc-cccc-cCCccChHHHHHHhheeEEEE
Confidence 567889999999999998 1 11221 1222 223456788899998888774
No 80
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=25.99 E-value=46 Score=26.26 Aligned_cols=51 Identities=12% Similarity=0.130 Sum_probs=30.2
Q ss_pred ChHHHHHHhcCCCceeee--cCCCe------eeEEe-ecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--GLPER------AEVGI-STARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~G~G------aEvGI-ST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ ....+ +.=|+ .+.-....|+-++++.+..|.|.
T Consensus 372 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 372 NKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred CHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 567889999999999998 11110 11111 11122245677777777777664
No 81
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=25.61 E-value=70 Score=27.12 Aligned_cols=61 Identities=13% Similarity=0.022 Sum_probs=39.3
Q ss_pred ChHHHHHHhcCCCceeee--cC--C---CeeeEEeecCCc---ccccccccccceEEEEEEEcCceeeccc
Q psy11679 2 NTHYQVDLIGTPDQACLA--GL--P---ERAEVGISTARI---HARGPVGVEGLLTTKWVLNGDGHVASEF 62 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~--G---~GaEvGIST~K~---HaRGPvGLe~L~t~K~vv~G~G~~~~~~ 62 (78)
|.+.+++|.+++++..|+ .. + ..+.-|+-.+-+ ..-|+-|+++++..|.|....-.+-+.|
T Consensus 527 d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~~~~~~~~ 597 (604)
T PLN02419 527 SGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQKDIHSPF 597 (604)
T ss_pred CHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEccCCccCCC
Confidence 567889999999999998 11 0 011122222222 2458999999999999987754443443
No 82
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=25.56 E-value=54 Score=25.50 Aligned_cols=49 Identities=14% Similarity=0.039 Sum_probs=30.9
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ ...||. ++ ++....--|+-++++++..|.+.
T Consensus 394 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG-~k-~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 394 DIARAEALGEQLETGTVFMNRCDYLDPALAWTG-VK-DSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred CHHHHHHHHHHcCcceEEECCCCCCCCCCCCCC-cc-ccccCccchHHHHHHHhceeEEe
Confidence 567889999999999998 112221 11 12233344777777777777664
No 83
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=25.49 E-value=45 Score=26.34 Aligned_cols=48 Identities=6% Similarity=-0.035 Sum_probs=32.0
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCC-cccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTAR-IHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K-~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ .+.|| |+-.+- ...-|+-|+++++..|-+.
T Consensus 404 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~Pfg---G~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 404 DLSRAHRVARRLRAGTVWVNCFDEGDITTPFG---GFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCCC---CcccccCCccchHHHHHHHhceeEEE
Confidence 567899999999999998 22222 111111 2245788888888888764
No 84
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=25.37 E-value=49 Score=26.39 Aligned_cols=49 Identities=8% Similarity=0.003 Sum_probs=32.0
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+.+|.+++|+..|+ .+.||- ++-| .-..--|+-|+++++..|.+.
T Consensus 415 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG-~k~S-G~G~~~g~~~~~~ft~~k~v~ 472 (475)
T cd07117 415 DINRALRVARAVETGRVWVNTYNQIPAGAPFGG-YKKS-GIGRETHKSMLDAYTQMKNIY 472 (475)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCC-CccC-cCCCCchHHHHHHHhCeEEEE
Confidence 457789999999999998 222221 1111 122345788888888888775
No 85
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=25.26 E-value=79 Score=25.52 Aligned_cols=49 Identities=20% Similarity=0.024 Sum_probs=32.7
Q ss_pred ChHHHHHHhcCCCceeee--c---------CCCeeeEEeecCCc-ccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--G---------LPERAEVGISTARI-HARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~---------~G~GaEvGIST~K~-HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ + +.||. ++-| .-. +.-|+-+|+..+..|.|.
T Consensus 451 d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG-~k~S-G~G~~~gg~~~l~~ft~~k~v~ 511 (514)
T PRK03137 451 NREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGG-FNMS-GTDSKAGGPDYLLLFLQAKTVS 511 (514)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCC-cccc-cCCcccCCHHHHHHhceEEEEE
Confidence 567899999999999998 1 22221 1211 122 345788889999888774
No 86
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=24.76 E-value=75 Score=25.15 Aligned_cols=49 Identities=16% Similarity=0.005 Sum_probs=33.9
Q ss_pred ChHHHHHHhcCCCceeee----------cCCCeeeEEeecCCcc---cccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA----------GLPERAEVGISTARIH---ARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~----------~~G~GaEvGIST~K~H---aRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++|+..|+ .+.|| |+-.+=+- .-|+-||++.+..|.|..
T Consensus 415 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~Pfg---G~k~SG~G~~~~~g~~~~~~~~~~k~v~~ 476 (478)
T cd07085 415 SGAAARKFQREVDAGMVGINVPIPVPLAFFSFG---GWKGSFFGDLHFYGKDGVRFYTQTKTVTS 476 (478)
T ss_pred CHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCC---CcccccCCCCcCChHHHHHHhcceEEEEE
Confidence 567899999999999999 12222 22222222 338899999999998754
No 87
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=24.25 E-value=57 Score=25.90 Aligned_cols=47 Identities=13% Similarity=0.072 Sum_probs=31.3
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCee--eEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERA--EVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~Ga--EvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ ...||- +=|+ ..--|+-++++.+..|.+.
T Consensus 422 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~~~~ft~~k~v~ 479 (481)
T cd07141 422 DIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGN----GRELGEYGLQEYTEVKTVT 479 (481)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcC----CccchHHHHHHHhheEEEE
Confidence 567899999999999998 222221 1122 2234778888888888764
No 88
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=24.07 E-value=63 Score=26.55 Aligned_cols=48 Identities=17% Similarity=0.088 Sum_probs=35.1
Q ss_pred ChHHHHHHhcCCCceeee-----------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA-----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~-----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.+++|+..|+ -||.--+=|+ ....|+-||+..+..|.|+.
T Consensus 472 d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~----G~~~G~~gl~~ft~~k~v~~ 530 (538)
T PLN02466 472 NLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGI----GREKGIYSLNNYLQVKAVVT 530 (538)
T ss_pred CHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCcc----CcccHHHHHHHhcceEEEEE
Confidence 567899999999999998 2322122232 23468999999999998876
No 89
>PF13061 DUF3923: Protein of unknown function (DUF3923)
Probab=24.02 E-value=23 Score=22.02 Aligned_cols=12 Identities=17% Similarity=0.047 Sum_probs=10.3
Q ss_pred HHhcCCCceeee
Q psy11679 8 DLIGTPDQACLA 19 (78)
Q Consensus 8 ~F~~~VDSA~V~ 19 (78)
-|+|.||+|+|+
T Consensus 22 I~~R~vDgaGv~ 33 (66)
T PF13061_consen 22 IWLRKVDGAGVV 33 (66)
T ss_pred heeeeccccccc
Confidence 478999999987
No 90
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=23.73 E-value=65 Score=25.43 Aligned_cols=49 Identities=12% Similarity=0.163 Sum_probs=33.6
Q ss_pred ChHHHHHHhcCCCceeee---------cCCCee--eEEeecCCcccccccccccceEEEEEEEc
Q psy11679 2 NTHYQVDLIGTPDQACLA---------GLPERA--EVGISTARIHARGPVGVEGLLTTKWVLNG 54 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~---------~~G~Ga--EvGIST~K~HaRGPvGLe~L~t~K~vv~G 54 (78)
|.+.+++|.+++|+..|+ .+.||. +=|+ ..--|+-||++++..|.++..
T Consensus 414 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~~~~~t~~k~i~~~ 473 (475)
T PRK13473 414 DVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGY----GKDMSLYGLEDYTVVRHVMVK 473 (475)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccc----CccchHHHHHHHhceEEEEEe
Confidence 567799999999999998 222222 2222 223478889999988887653
No 91
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=22.77 E-value=68 Score=25.04 Aligned_cols=49 Identities=6% Similarity=0.040 Sum_probs=31.4
Q ss_pred ChHHHHHHhcCCCceeee--c--------CCCeeeEEeecCCcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--G--------LPERAEVGISTARIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~--------~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++|+..|+ . ..||- ++- +.-..--|+-||++.+..|.|.
T Consensus 393 d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG-~~~-SG~G~~~g~~~~~~~~~~k~i~ 451 (452)
T cd07147 393 DLEKALRAWDELEVGGVVINDVPTFRVDHMPYGG-VKD-SGIGREGVRYAIEEMTEPRLLV 451 (452)
T ss_pred CHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCC-ccc-cccCCCChHHHHHHhcceeEEe
Confidence 567899999999999998 1 11111 111 1122345778888888888764
No 92
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=21.97 E-value=83 Score=24.97 Aligned_cols=50 Identities=8% Similarity=-0.016 Sum_probs=32.8
Q ss_pred ChHHHHHHhcC--CCceeee----------cCCCeeeEEeecCCcccccccccccceEEEEEEE
Q psy11679 2 NTHYQVDLIGT--PDQACLA----------GLPERAEVGISTARIHARGPVGVEGLLTTKWVLN 53 (78)
Q Consensus 2 ~~~~s~~F~~~--VDSA~V~----------~~G~GaEvGIST~K~HaRGPvGLe~L~t~K~vv~ 53 (78)
|.+.+++|.++ +++..|+ .+.||- ++-| .-..-.|+-+++.++..|.|+.
T Consensus 414 d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG-~~~S-G~G~~~g~~~~~~f~~~k~i~~ 475 (478)
T cd07086 414 DLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGG-EKET-GGGRESGSDAWKQYMRRSTCTI 475 (478)
T ss_pred CHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCC-cccc-cCCccchHHHHHHhhceEEEEE
Confidence 56789999999 9999998 112221 1111 1122346778999998888764
No 93
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=21.92 E-value=99 Score=24.88 Aligned_cols=48 Identities=17% Similarity=0.053 Sum_probs=32.6
Q ss_pred ChHHHHHHhcCCCceeee--c---------CCCeeeEEeecCCcc--cccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--G---------LPERAEVGISTARIH--ARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~---------~G~GaEvGIST~K~H--aRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ . ..|| |+-.+-+- .-|+-|+++.+..|-|.
T Consensus 449 d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfG---G~k~SG~G~~~~g~~~~~~~t~~k~v~ 509 (512)
T cd07124 449 SPEHLERARREFEVGNLYANRKITGALVGRQPFG---GFKMSGTGSKAGGPDYLLQFMQPKTVT 509 (512)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCC---ccccccCCCccCcHHHHHHhccEEEEE
Confidence 567789999999999998 1 2232 22222222 34688999999888775
No 94
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=21.33 E-value=72 Score=25.13 Aligned_cols=51 Identities=8% Similarity=0.055 Sum_probs=32.2
Q ss_pred ChHHHHHHhcCCCceeee--c---CCC--eeeEEeecC-CcccccccccccceEEEEEE
Q psy11679 2 NTHYQVDLIGTPDQACLA--G---LPE--RAEVGISTA-RIHARGPVGVEGLLTTKWVL 52 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~---~G~--GaEvGIST~-K~HaRGPvGLe~L~t~K~vv 52 (78)
|.+.+++|.+++++..|+ . +.. .+.=|+-.+ -...-|+-||++++..|++.
T Consensus 396 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 396 DLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred CHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence 567899999999999998 1 110 011122111 12355788888888888774
No 95
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=20.72 E-value=78 Score=28.54 Aligned_cols=52 Identities=19% Similarity=0.015 Sum_probs=37.0
Q ss_pred ChHHHHHHhcCCCceeee--cCCCeeeE--------EeecCCc-ccccccccccceEEEEEEEc
Q psy11679 2 NTHYQVDLIGTPDQACLA--GLPERAEV--------GISTARI-HARGPVGVEGLLTTKWVLNG 54 (78)
Q Consensus 2 ~~~~s~~F~~~VDSA~V~--~~G~GaEv--------GIST~K~-HaRGPvGLe~L~t~K~vv~G 54 (78)
|.+.+++|.+++++..|| +.-.|+.+ |.|= -. .+-||-+|..++..|.|...
T Consensus 964 d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG-~G~kaGG~~~L~~f~~~ktv~~~ 1026 (1038)
T PRK11904 964 IEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSG-TGPKAGGPHYLLRFATEKTVTVN 1026 (1038)
T ss_pred CHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCC-CCCccchHHHHHHHhceEEEEEc
Confidence 567899999999999999 22223322 2222 22 36789999999999998763
Done!