Query psy11680
Match_columns 135
No_of_seqs 110 out of 715
Neff 3.0
Searched_HMMs 46136
Date Fri Aug 16 16:08:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11680.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11680hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4165|consensus 100.0 2.1E-47 4.5E-52 330.7 8.3 101 35-135 329-429 (433)
2 COG0014 ProA Gamma-glutamyl ph 100.0 9.7E-45 2.1E-49 315.7 7.6 83 35-117 335-417 (417)
3 PLN02418 delta-1-pyrroline-5-c 99.8 3E-19 6.6E-24 162.0 7.8 96 37-135 622-717 (718)
4 TIGR02518 EutH_ACDH acetaldehy 99.8 1.8E-19 4E-24 156.4 5.9 75 36-115 365-448 (488)
5 TIGR00407 proA gamma-glutamyl 99.8 3.2E-19 6.9E-24 151.8 5.9 71 36-106 328-398 (398)
6 TIGR01092 P5CS delta l-pyrroli 99.7 4.5E-18 9.7E-23 154.0 8.5 97 36-135 615-711 (715)
7 PRK00197 proA gamma-glutamyl p 99.4 1.5E-12 3.2E-17 110.6 7.6 81 37-117 337-417 (417)
8 PRK13805 bifunctional acetalde 99.3 2E-12 4.3E-17 118.7 5.2 75 36-115 370-454 (862)
9 cd07079 ALDH_F18-19_ProA-GPR G 99.1 4.5E-10 9.8E-15 95.2 7.9 76 37-112 331-406 (406)
10 cd07077 ALDH-like NAD(P)+-depe 99.0 6.9E-10 1.5E-14 92.9 6.9 74 37-110 323-397 (397)
11 PRK15398 aldehyde dehydrogenas 98.9 7.1E-10 1.5E-14 96.3 4.2 67 34-108 384-450 (465)
12 cd06534 ALDH-SF NAD(P)+-depend 98.5 1.4E-07 3.1E-12 76.8 5.0 70 36-109 296-366 (367)
13 cd07150 ALDH_VaniDH_like Pseud 98.4 4E-07 8.6E-12 76.9 5.3 69 37-109 381-450 (451)
14 cd07152 ALDH_BenzADH NAD-depen 98.3 7.5E-07 1.6E-11 75.5 5.2 71 37-109 372-442 (443)
15 cd07099 ALDH_DDALDH Methylomon 98.3 8.7E-07 1.9E-11 74.9 5.1 72 37-110 382-453 (453)
16 cd07104 ALDH_BenzADH-like ALDH 98.3 1E-06 2.2E-11 73.7 4.9 72 35-109 359-430 (431)
17 cd07120 ALDH_PsfA-ACA09737 Pse 98.2 2E-06 4.3E-11 74.0 4.9 69 37-109 386-454 (455)
18 cd07078 ALDH NAD(P)+ dependent 98.0 6E-06 1.3E-10 68.7 4.8 70 36-109 361-431 (432)
19 cd07103 ALDH_F5_SSADH_GabD Mit 97.9 1.2E-05 2.6E-10 67.8 4.3 70 36-109 381-450 (451)
20 cd07151 ALDH_HBenzADH NADP+-de 97.9 1.7E-05 3.7E-10 68.0 5.1 71 37-110 393-463 (465)
21 cd07082 ALDH_F11_NP-GAPDH NADP 97.8 3.2E-05 6.8E-10 66.2 4.8 70 37-110 402-472 (473)
22 cd07110 ALDH_F10_BADH Arabidop 97.7 3.2E-05 7E-10 65.9 4.3 71 36-110 386-456 (456)
23 cd07114 ALDH_DhaS Uncharacteri 97.7 3.8E-05 8.2E-10 65.4 4.5 71 35-109 386-456 (457)
24 cd07121 ALDH_EutE Ethanolamine 97.7 3.7E-05 7.9E-10 66.4 4.1 65 36-108 356-420 (429)
25 cd07091 ALDH_F1-2_Ald2-like AL 97.7 4.4E-05 9.5E-10 65.5 4.5 71 35-109 405-475 (476)
26 PLN02278 succinic semialdehyde 97.7 6.7E-05 1.4E-09 65.5 5.2 73 36-112 424-496 (498)
27 cd07115 ALDH_HMSADH_HapE Pseud 97.6 8.4E-05 1.8E-09 63.3 5.0 71 36-110 381-451 (453)
28 cd07105 ALDH_SaliADH Salicylal 97.6 0.0001 2.2E-09 62.6 5.1 71 36-109 361-431 (432)
29 cd07106 ALDH_AldA-AAD23400 Str 97.6 9.1E-05 2E-09 63.0 4.7 69 37-109 377-445 (446)
30 cd07088 ALDH_LactADH-AldA Esch 97.5 0.00011 2.4E-09 62.6 4.6 69 37-109 399-467 (468)
31 cd07089 ALDH_CddD-AldA-like Rh 97.5 0.00012 2.7E-09 62.8 4.8 70 36-109 389-458 (459)
32 cd07143 ALDH_AldA_AN0554 Asper 97.5 0.00013 2.9E-09 63.3 4.8 70 37-110 410-479 (481)
33 cd07119 ALDH_BADH-GbsA Bacillu 97.4 0.00018 3.9E-09 61.9 4.7 72 37-112 403-474 (482)
34 PLN00412 NADP-dependent glycer 97.4 0.00027 6E-09 61.7 5.2 72 36-111 415-487 (496)
35 cd07147 ALDH_F21_RNP123 Aldehy 97.4 0.00027 5.8E-09 60.1 4.9 70 36-109 381-451 (452)
36 cd07116 ALDH_ACDHII-AcoD Ralst 97.4 0.00024 5.2E-09 61.3 4.6 70 37-110 408-477 (479)
37 cd07090 ALDH_F9_TMBADH NAD+-de 97.4 0.00028 6E-09 60.2 4.8 75 35-113 383-457 (457)
38 cd07145 ALDH_LactADH_F420-Bios 97.3 0.00043 9.4E-09 59.0 5.1 70 36-109 385-455 (456)
39 cd07100 ALDH_SSADH1_GabD1 Myco 97.2 0.00045 9.7E-09 58.8 4.9 69 37-109 360-428 (429)
40 cd07144 ALDH_ALD2-YMR170C Sacc 97.2 0.00047 1E-08 59.5 5.0 70 37-110 413-482 (484)
41 cd07148 ALDH_RL0313 Uncharacte 97.2 0.00045 9.8E-09 59.3 4.7 70 36-109 384-454 (455)
42 cd07094 ALDH_F21_LactADH-like 97.2 0.00048 1E-08 58.6 4.7 70 36-109 382-452 (453)
43 cd07102 ALDH_EDX86601 Uncharac 97.2 0.00058 1.3E-08 57.9 4.9 70 36-109 382-451 (452)
44 TIGR01722 MMSDH methylmalonic 97.2 0.0007 1.5E-08 58.5 5.4 74 36-111 402-476 (477)
45 cd07131 ALDH_AldH-CAJ73105 Unc 97.2 0.00072 1.6E-08 58.0 5.3 71 37-110 404-475 (478)
46 cd07107 ALDH_PhdK-like Nocardi 97.1 0.00071 1.5E-08 57.9 5.1 71 36-110 384-454 (456)
47 cd07125 ALDH_PutA-P5CDH Delta( 97.1 0.0009 1.9E-08 58.7 5.8 72 36-110 433-506 (518)
48 cd07559 ALDH_ACDHII_AcoD-like 97.1 0.00062 1.3E-08 59.1 4.6 70 37-110 409-478 (480)
49 PLN02467 betaine aldehyde dehy 97.1 0.00073 1.6E-08 59.4 4.8 71 37-111 418-488 (503)
50 cd07142 ALDH_F2BC Arabidosis a 97.0 0.00077 1.7E-08 58.2 4.4 69 37-109 407-475 (476)
51 PRK09847 gamma-glutamyl-gamma- 97.0 0.0011 2.3E-08 58.0 5.0 71 36-110 421-491 (494)
52 PLN02466 aldehyde dehydrogenas 97.0 0.001 2.2E-08 59.3 4.8 72 36-111 460-531 (538)
53 cd07092 ALDH_ABALDH-YdcW Esche 97.0 0.0012 2.6E-08 56.0 4.8 71 35-109 379-449 (450)
54 cd07149 ALDH_y4uC Uncharacteri 96.9 0.0013 2.7E-08 55.7 4.8 70 36-109 382-452 (453)
55 cd07139 ALDH_AldA-Rv0768 Mycob 96.9 0.0011 2.5E-08 56.7 4.5 69 36-109 402-470 (471)
56 TIGR02299 HpaE 5-carboxymethyl 96.9 0.0015 3.3E-08 56.5 5.2 74 35-112 405-478 (488)
57 cd07085 ALDH_F6_MMSDH Methylma 96.9 0.0016 3.4E-08 56.2 5.3 71 38-110 405-476 (478)
58 cd07135 ALDH_F14-YMR110C Sacch 96.9 0.0009 1.9E-08 57.7 3.8 70 36-109 364-435 (436)
59 cd07132 ALDH_F3AB Aldehyde deh 96.9 0.0018 3.8E-08 55.9 5.2 72 37-112 355-428 (443)
60 PRK13473 gamma-aminobutyraldeh 96.8 0.0018 3.9E-08 55.7 5.0 72 36-111 402-473 (475)
61 cd07117 ALDH_StaphAldA1 Unchar 96.8 0.0015 3.3E-08 56.7 4.5 70 37-110 404-473 (475)
62 PRK13252 betaine aldehyde dehy 96.8 0.0022 4.8E-08 55.6 5.3 72 36-111 409-480 (488)
63 cd07097 ALDH_KGSADH-YcbD Bacil 96.8 0.002 4.4E-08 55.5 4.8 70 37-109 402-472 (473)
64 cd07113 ALDH_PADH_NahF Escheri 96.8 0.0021 4.6E-08 55.5 4.9 70 37-110 406-475 (477)
65 cd07122 ALDH_F20_ACDH Coenzyme 96.8 0.003 6.6E-08 55.1 5.7 38 37-74 357-394 (436)
66 PRK13968 putative succinate se 96.7 0.0025 5.5E-08 55.2 5.0 71 36-110 389-459 (462)
67 cd07109 ALDH_AAS00426 Uncharac 96.7 0.0024 5.3E-08 54.5 4.9 70 36-109 383-453 (454)
68 cd07146 ALDH_PhpJ Streptomyces 96.7 0.0022 4.8E-08 55.1 4.6 72 35-109 378-450 (451)
69 cd07108 ALDH_MGR_2402 Magnetos 96.7 0.0028 6.1E-08 54.1 5.1 70 36-109 386-456 (457)
70 TIGR03216 OH_muco_semi_DH 2-hy 96.7 0.0026 5.7E-08 55.0 4.9 70 37-110 410-479 (481)
71 cd07118 ALDH_SNDH Gluconobacte 96.7 0.0026 5.5E-08 54.7 4.8 70 36-109 384-453 (454)
72 cd07124 ALDH_PutA-P5CDH-RocA D 96.7 0.0032 7E-08 55.1 5.5 69 37-109 438-509 (512)
73 cd07083 ALDH_P5CDH ALDH subfam 96.6 0.0043 9.3E-08 54.2 5.7 71 37-110 426-498 (500)
74 TIGR03240 arg_catab_astD succi 96.6 0.0061 1.3E-07 52.9 6.6 71 36-111 397-468 (484)
75 PRK09406 gabD1 succinic semial 96.6 0.0035 7.7E-08 54.2 5.0 71 37-111 387-457 (457)
76 TIGR01238 D1pyr5carbox3 delta- 96.5 0.0025 5.4E-08 56.2 3.9 68 36-107 430-500 (500)
77 cd07112 ALDH_GABALDH-PuuC Esch 96.5 0.0034 7.5E-08 54.0 4.6 69 37-109 393-461 (462)
78 PRK11905 bifunctional proline 96.5 0.0026 5.7E-08 62.4 4.3 73 36-109 944-1016(1208)
79 PRK10090 aldehyde dehydrogenas 96.5 0.004 8.6E-08 53.5 4.9 70 37-110 337-406 (409)
80 cd07086 ALDH_F7_AASADH-like NA 96.5 0.0043 9.3E-08 53.7 5.1 71 36-110 402-475 (478)
81 cd07141 ALDH_F1AB_F2_RALDH1 NA 96.5 0.0037 8.1E-08 54.1 4.8 70 36-109 410-479 (481)
82 cd07093 ALDH_F8_HMSADH Human a 96.5 0.0039 8.3E-08 53.0 4.6 70 36-109 385-454 (455)
83 TIGR01237 D1pyr5carbox2 delta- 96.5 0.006 1.3E-07 53.5 5.7 69 37-109 437-508 (511)
84 cd07138 ALDH_CddD_SSP0762 Rhod 96.4 0.0055 1.2E-07 52.7 4.8 68 37-109 398-465 (466)
85 PRK11809 putA trifunctional tr 96.3 0.0038 8.2E-08 62.0 4.0 71 36-107 1041-1111(1318)
86 cd07101 ALDH_SSADH2_GabD2 Myco 96.3 0.0075 1.6E-07 51.7 5.0 69 37-109 382-453 (454)
87 TIGR01804 BADH glycine betaine 96.2 0.0042 9E-08 53.4 3.2 66 36-105 401-466 (467)
88 cd07111 ALDH_F16 Aldehyde dehy 96.2 0.0048 1E-07 53.9 3.6 66 37-106 411-476 (480)
89 cd07130 ALDH_F7_AASADH NAD+-de 96.2 0.0079 1.7E-07 52.1 4.8 71 36-110 398-471 (474)
90 cd07087 ALDH_F3-13-14_CALDH-li 96.2 0.0065 1.4E-07 51.8 4.1 70 36-109 354-425 (426)
91 cd07137 ALDH_F3FHI Plant aldeh 96.1 0.0062 1.3E-07 52.5 3.8 69 37-109 361-431 (432)
92 cd07134 ALDH_AlkH-like Pseudom 96.1 0.0074 1.6E-07 51.8 4.1 70 36-109 361-432 (433)
93 PRK09407 gabD2 succinic semial 96.0 0.011 2.4E-07 52.1 5.2 73 37-113 418-493 (524)
94 cd07136 ALDH_YwdH-P39616 Bacil 96.0 0.012 2.6E-07 51.4 5.0 76 36-115 354-431 (449)
95 cd07098 ALDH_F15-22 Aldehyde d 95.9 0.016 3.4E-07 49.8 5.5 70 37-110 392-463 (465)
96 PRK03137 1-pyrroline-5-carboxy 95.8 0.02 4.4E-07 50.3 5.6 69 37-109 440-511 (514)
97 cd07133 ALDH_CALDH_CalB Conife 95.7 0.014 3.1E-07 50.1 4.1 70 36-109 362-433 (434)
98 PLN02203 aldehyde dehydrogenas 95.6 0.025 5.3E-07 50.1 5.4 72 38-113 372-445 (484)
99 PRK09457 astD succinylglutamic 95.6 0.04 8.7E-07 48.1 6.6 71 36-111 399-470 (487)
100 PLN02174 aldehyde dehydrogenas 95.2 0.028 6E-07 50.0 4.6 72 37-112 372-445 (484)
101 PF00171 Aldedh: Aldehyde dehy 95.2 0.022 4.9E-07 48.8 3.7 69 36-108 393-462 (462)
102 PTZ00381 aldehyde dehydrogenas 95.1 0.038 8.2E-07 48.8 5.0 73 36-112 365-439 (493)
103 cd07081 ALDH_F20_ACDH_EutE-lik 94.9 0.038 8.3E-07 48.3 4.6 37 37-73 356-395 (439)
104 PLN02315 aldehyde dehydrogenas 94.8 0.044 9.6E-07 48.6 4.7 71 37-111 421-494 (508)
105 PRK11904 bifunctional proline 94.7 0.051 1.1E-06 52.8 5.2 73 36-111 952-1026(1038)
106 cd07095 ALDH_SGSD_AstD N-succi 94.7 0.027 6E-07 48.3 3.0 68 36-108 361-429 (431)
107 PRK11241 gabD succinate-semial 94.6 0.054 1.2E-06 47.6 4.7 70 38-111 412-481 (482)
108 TIGR03374 ABALDH 1-pyrroline d 94.6 0.06 1.3E-06 47.0 4.8 69 37-109 402-470 (472)
109 PLN02766 coniferyl-aldehyde de 94.5 0.06 1.3E-06 47.5 4.8 70 37-110 424-493 (501)
110 TIGR03250 PhnAcAld_DH putative 94.3 0.077 1.7E-06 46.1 5.0 72 36-110 398-470 (472)
111 PLN02419 methylmalonate-semial 93.5 0.12 2.7E-06 47.5 5.0 74 38-113 517-591 (604)
112 cd07140 ALDH_F1L_FTFDH 10-form 93.4 0.15 3.2E-06 44.9 5.1 69 38-110 416-484 (486)
113 TIGR01236 D1pyr5carbox1 delta- 92.5 0.28 6E-06 43.9 5.5 71 38-111 446-520 (533)
114 COG1012 PutA NAD-dependent ald 91.7 0.25 5.4E-06 43.8 4.3 70 38-111 397-468 (472)
115 TIGR01780 SSADH succinate-semi 90.4 0.27 5.9E-06 42.3 3.2 65 38-106 384-448 (448)
116 cd07123 ALDH_F4-17_P5CDH Delta 89.6 0.65 1.4E-05 41.3 5.0 70 38-110 445-518 (522)
117 TIGR02288 PaaN_2 phenylacetic 86.0 1.1 2.5E-05 40.8 4.4 42 39-80 473-524 (551)
118 cd07129 ALDH_KGSADH Alpha-Keto 83.1 1.3 2.8E-05 38.5 3.3 66 37-104 375-448 (454)
119 COG3688 Predicted RNA-binding 82.9 1.9 4E-05 35.2 3.9 64 20-83 51-121 (173)
120 cd07084 ALDH_KGSADH-like ALDH 82.8 2.1 4.5E-05 37.2 4.5 69 36-107 367-439 (442)
121 PRK11563 bifunctional aldehyde 82.7 2.1 4.6E-05 39.4 4.7 69 38-111 427-508 (675)
122 PRK11903 aldehyde dehydrogenas 79.9 1.7 3.7E-05 38.9 3.0 69 37-109 425-505 (521)
123 TIGR02278 PaaN-DH phenylacetic 77.8 4.3 9.4E-05 37.6 5.0 69 38-111 415-496 (663)
124 cd07128 ALDH_MaoC-N N-terminal 73.8 4.9 0.00011 36.0 4.2 68 38-109 423-502 (513)
125 cd07126 ALDH_F12_P5CDH Delta(1 68.8 8.4 0.00018 34.5 4.5 39 37-75 413-453 (489)
126 smart00070 GLUCA Glucagon like 67.4 3.1 6.8E-05 24.4 1.0 19 40-58 1-25 (27)
127 PF00123 Hormone_2: Peptide ho 56.5 2 4.3E-05 25.4 -1.1 20 40-59 1-26 (28)
128 PF10290 DUF2403: Glycine-rich 53.9 5.1 0.00011 27.9 0.4 26 75-105 37-62 (65)
129 KOG2450|consensus 50.9 34 0.00074 31.9 5.3 72 35-110 423-494 (501)
130 KOG1506|consensus 42.3 29 0.00063 31.1 3.3 60 36-114 193-261 (383)
131 KOG2449|consensus 35.7 29 0.00063 28.1 2.1 31 39-69 111-141 (157)
132 PRK14741 spoVM stage V sporula 34.1 21 0.00045 21.2 0.8 8 3-10 2-9 (26)
133 TIGR01034 metK S-adenosylmethi 33.8 79 0.0017 28.6 4.7 59 36-116 182-252 (377)
134 PF08183 SpoV: Stage V sporula 33.0 21 0.00045 21.3 0.7 7 3-9 2-8 (26)
135 PRK05250 S-adenosylmethionine 29.2 97 0.0021 28.1 4.5 60 36-117 185-256 (384)
136 COG1648 CysG Siroheme synthase 28.8 75 0.0016 25.7 3.4 47 43-89 77-129 (210)
137 PLN02243 S-adenosylmethionine 28.5 97 0.0021 28.2 4.4 60 36-117 193-264 (386)
138 PF12419 DUF3670: SNF2 Helicas 27.0 1E+02 0.0022 23.1 3.6 68 48-115 12-84 (141)
139 KOG2453|consensus 25.6 41 0.00088 31.1 1.5 35 36-70 419-455 (507)
140 KOG3858|consensus 25.0 83 0.0018 26.6 3.2 47 60-110 25-74 (233)
141 PHA02642 C-type lectin-like pr 23.2 28 0.00061 28.9 0.1 84 6-89 47-151 (216)
142 cd08696 C2_Dock-C C2 domains f 22.2 39 0.00084 27.0 0.7 31 54-84 51-81 (179)
143 PRK05562 precorrin-2 dehydroge 22.1 1E+02 0.0023 25.3 3.2 61 25-89 75-142 (223)
144 PRK11625 Rho-binding antitermi 20.4 41 0.00089 24.2 0.4 12 25-36 2-13 (84)
No 1
>KOG4165|consensus
Probab=100.00 E-value=2.1e-47 Score=330.70 Aligned_cols=101 Identities=64% Similarity=1.053 Sum_probs=98.2
Q ss_pred CCCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeCCce
Q psy11680 35 FMNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGDGH 114 (135)
Q Consensus 35 ~~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~Gq 114 (135)
-++|.|||||||||.++|+.|+++||||+|||||||||+||||||+||||||||+|+|||||||||+|+||||+++|+||
T Consensus 329 ~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~gq 408 (433)
T KOG4165|consen 329 THGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGKGQ 408 (433)
T ss_pred hcCCcccceEEecCHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEecCCc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCCCceeeeccCCCC
Q psy11680 115 VASEFAEGGPCTFVHEHLPIN 135 (135)
Q Consensus 115 ~r~~y~~~~~~~~~h~~l~~~ 135 (135)
++.+|.++|.++|+|++||++
T Consensus 409 vvsd~~~~G~~~y~H~~l~i~ 429 (433)
T KOG4165|consen 409 VVSDFNEGGKRAYLHEDLPID 429 (433)
T ss_pred eeccccCCCceeeeecCCChh
Confidence 999999889999999999874
No 2
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.7e-45 Score=315.66 Aligned_cols=83 Identities=45% Similarity=0.728 Sum_probs=81.2
Q ss_pred CCCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeCCce
Q psy11680 35 FMNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGDGH 114 (135)
Q Consensus 35 ~~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~Gq 114 (135)
.++|+|||+|||+|+++|++|+++||||+|||||||||+||+|||+||||||||||+|||||||||+||||||+|+|+||
T Consensus 335 ~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~Gq 414 (417)
T COG0014 335 TYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGDGQ 414 (417)
T ss_pred HhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCCce
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eec
Q psy11680 115 VAS 117 (135)
Q Consensus 115 ~r~ 117 (135)
+|+
T Consensus 415 vr~ 417 (417)
T COG0014 415 VRP 417 (417)
T ss_pred ecC
Confidence 985
No 3
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=99.78 E-value=3e-19 Score=162.00 Aligned_cols=96 Identities=56% Similarity=0.907 Sum_probs=91.3
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeCCceee
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGDGHVA 116 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~Gq~r 116 (135)
..||+.+|.|+|.+.|++|.+++|++.|+||+++++.++..||..-+.||||+|.|+|||.||++++++|+|..|+||+|
T Consensus 622 ~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g~~~ 701 (718)
T PLN02418 622 GSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNGQVV 701 (718)
T ss_pred CCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCCeec
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCceeeeccCCCC
Q psy11680 117 SEFAEGGPCTFVHEHLPIN 135 (135)
Q Consensus 117 ~~y~~~~~~~~~h~~l~~~ 135 (135)
+ ++..+.|+|++||++
T Consensus 702 ~---~~~~~~~~~~~~~~~ 717 (718)
T PLN02418 702 D---GDKGVVYTHKDLPLQ 717 (718)
T ss_pred C---CCCCcccccccccCC
Confidence 6 456789999999985
No 4
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=99.78 E-value=1.8e-19 Score=156.39 Aligned_cols=75 Identities=20% Similarity=0.219 Sum_probs=71.3
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeec---------ccccccCCccccCceEEEeecCCcccccccccccceEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHN---------ASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTK 106 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vN---------ASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~K 106 (135)
.+.|||++|.|+|.+.+++|.+++|++.|||| |||||.||++||+|+|+||||+ | |||+++|+++|
T Consensus 365 ~~~Glta~I~T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~--~---~v~~~~l~~~k 439 (488)
T TIGR02518 365 EGAGHTLIIHSENKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS--D---NITPENLINIR 439 (488)
T ss_pred CCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC--C---CCCHHHhheee
Confidence 57899999999999999999999999999999 9999999999999999999999 5 99999999999
Q ss_pred EEEeCCcee
Q psy11680 107 WVLNGDGHV 115 (135)
Q Consensus 107 yvv~G~Gq~ 115 (135)
||++|-=+.
T Consensus 440 ~v~~~~~~~ 448 (488)
T TIGR02518 440 RVAYGVREL 448 (488)
T ss_pred EEEeccccc
Confidence 999998333
No 5
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=99.77 E-value=3.2e-19 Score=151.76 Aligned_cols=71 Identities=52% Similarity=0.857 Sum_probs=69.1
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTK 106 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~K 106 (135)
.+.+|+.+|.|+|.+.+++|.+++|++.|+||.++++.++..||+|.|+||||||+|+|||+|||.|||+|
T Consensus 328 ~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 328 YGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred hCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999987
No 6
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=99.74 E-value=4.5e-18 Score=154.00 Aligned_cols=97 Identities=58% Similarity=0.906 Sum_probs=91.7
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeCCcee
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGDGHV 115 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~Gq~ 115 (135)
...+|+.+|.|+|.+.+++|.+++||+.|+||.++++.++..||.+.+-|++++++|.+||.||+++++.|+|..|+||+
T Consensus 615 ~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g~~ 694 (715)
T TIGR01092 615 HGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKGQV 694 (715)
T ss_pred CCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCCee
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCCCceeeeccCCCC
Q psy11680 116 ASEFAEGGPCTFVHEHLPIN 135 (135)
Q Consensus 116 r~~y~~~~~~~~~h~~l~~~ 135 (135)
|+ ++..+.|+|++||+|
T Consensus 695 ~~---~~~~~~~~~~~~~~~ 711 (715)
T TIGR01092 695 VS---GDHGLVYTHKDLPIP 711 (715)
T ss_pred cC---CCCCcceecccCCcc
Confidence 97 445688999999986
No 7
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=99.36 E-value=1.5e-12 Score=110.58 Aligned_cols=81 Identities=47% Similarity=0.742 Sum_probs=78.4
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeCCceee
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGDGHVA 116 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~Gq~r 116 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++++.++..||.|-|-|+.++|++.+||.||++++..|++..|+||+|
T Consensus 337 ~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~~~~~ 416 (417)
T PRK00197 337 GSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGDGQIR 416 (417)
T ss_pred CCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECCCeeC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred c
Q psy11680 117 S 117 (135)
Q Consensus 117 ~ 117 (135)
.
T Consensus 417 ~ 417 (417)
T PRK00197 417 A 417 (417)
T ss_pred c
Confidence 4
No 8
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=99.30 E-value=2e-12 Score=118.70 Aligned_cols=75 Identities=20% Similarity=0.234 Sum_probs=69.9
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccc----------cccCCccccCceEEEeecCCcccccccccccceEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASS----------RFADGYRFGLGAEVGISTARIHARGPVGVEGLLTT 105 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNAST----------RFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~ 105 (135)
.+.+|+.+|.|+|.+.+++|.+++|++.|+||+|+ ||+++..||.|.+.|+|++ ||+|++.|+++
T Consensus 370 ~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~G~~g~~~~~-----g~~g~~~~~~~ 444 (862)
T PRK13805 370 GGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGCGSWGGNSVS-----ENVGAKHLLNI 444 (862)
T ss_pred CCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccccCCCCCcCC-----CCCCHHHhhee
Confidence 35799999999999999999999999999999999 9999999999999999997 99999999999
Q ss_pred EEEEeCCcee
Q psy11680 106 KWVLNGDGHV 115 (135)
Q Consensus 106 Kyvv~G~Gq~ 115 (135)
|||++..-..
T Consensus 445 k~v~~~~~~~ 454 (862)
T PRK13805 445 KTVAKRRENM 454 (862)
T ss_pred eeeeeccccc
Confidence 9999765433
No 9
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=99.07 E-value=4.5e-10 Score=95.24 Aligned_cols=76 Identities=51% Similarity=0.780 Sum_probs=72.7
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeCC
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGD 112 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~ 112 (135)
..+|+-+|.|+|.+.+++|.+++++..|+||.++.+.++..||.+-|.|+|+++++.+|+-||++++..|.+.+||
T Consensus 331 ~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~~ 406 (406)
T cd07079 331 GSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRGD 406 (406)
T ss_pred CCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeCC
Confidence 4689999999999999999999999999999999998888899888999999999999999999999999999996
No 10
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=99.01 E-value=6.9e-10 Score=92.92 Aligned_cols=74 Identities=24% Similarity=0.285 Sum_probs=70.9
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCccccc-ccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARG-PVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRG-PvGLe~Ltt~Kyvv~ 110 (135)
..+|+.+|.|.|.+.+++|.+++|+..|+||.++++.++..+|+|..-+|++++++.+| +.|+++++..|++++
T Consensus 323 ~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~~ 397 (397)
T cd07077 323 GGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLVR 397 (397)
T ss_pred CCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEeeC
Confidence 34899999999999999999999999999999999998999999999999999999999 999999999999984
No 11
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=98.93 E-value=7.1e-10 Score=96.34 Aligned_cols=67 Identities=21% Similarity=0.316 Sum_probs=59.1
Q ss_pred CCCCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEE
Q psy11680 34 PFMNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWV 108 (135)
Q Consensus 34 ~~~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyv 108 (135)
--.+.+||.+|.|+|.+.+++|.+++|++.|+||.++ + .+.|+|-+ |.|| +|.|||+| ++||+.|-+
T Consensus 384 ~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~-~---~~~p~gg~-~~s~--~~~~~~~g-~~~~~~~~~ 450 (465)
T PRK15398 384 LEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPS-Y---AGLGLGGE-GFTT--FTIATPTG-EGVTSARTF 450 (465)
T ss_pred cccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCC-c---cccCcCCC-CCce--eeecccCC-CCccchhhh
Confidence 3457799999999999999999999999999999887 3 45788877 8888 89999999 999998854
No 12
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=98.51 E-value=1.4e-07 Score=76.85 Aligned_cols=70 Identities=26% Similarity=0.248 Sum_probs=63.6
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccc-cCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRF-ADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRF-sDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.+++|.++++++.|+||.++++ .++..||..-+-|+.+ .+||.++++++..|+++
T Consensus 296 ~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~----~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 296 TEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGR----EGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCC----CChHHHHHHhceEEEEe
Confidence 3568999999999999999999999999999999999 7777899888888765 39999999999999986
No 13
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=98.40 E-value=4e-07 Score=76.95 Aligned_cols=69 Identities=16% Similarity=0.275 Sum_probs=60.8
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccc-cccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHAR-GPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaR-GPvGLe~Ltt~Kyvv 109 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++-. +..+..+| |+..+.++.+ ||-||++++..|.+.
T Consensus 381 ~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~pfg---G~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 381 EYGLSAAILTNDLQRAFKLAERLESGMVHINDPTIL-DEAHVPFG---GVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred CCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCC-CCCCCCcC---CccccccCcCCcHHHHHHhheeeEEe
Confidence 458999999999999999999999999999999844 44556666 8888899877 999999999999885
No 14
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=98.33 E-value=7.5e-07 Score=75.46 Aligned_cols=71 Identities=14% Similarity=0.153 Sum_probs=62.8
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+||-+|.|+|.+.+++|.+++++..|+||.+++.. ..+..+|- +|.|....+.+||.||++++..|++.
T Consensus 372 ~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~~pfGG-~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 372 EYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVND-EPHNPFGG-MGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred CccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCC-cccccCCCccCcHHHHHHhhceeEEe
Confidence 5689999999999999999999999999999998854 34566766 89998776899999999999999875
No 15
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=98.31 E-value=8.7e-07 Score=74.94 Aligned_cols=72 Identities=15% Similarity=0.080 Sum_probs=64.9
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++.+....+..+|.. |.|- ..+..|+.||++++..|++.+
T Consensus 382 ~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~-~~SG-~g~~~g~~~~~~~t~~k~v~~ 453 (453)
T cd07099 382 RYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGV-KDSG-GGRRHGAEGLREFCRPKAIAR 453 (453)
T ss_pred CCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCc-cccc-CCccChHHHHHHhcceEEEeC
Confidence 45799999999999999999999999999999998887777777774 8887 788999999999999999864
No 16
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=98.28 E-value=1e-06 Score=73.70 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=60.6
Q ss_pred CCCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 35 FMNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 35 ~~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
....+||.+|.|+|.+.+++|.+++++..|+||.++.. +..+.+||-. +.|. -...+||.||++++..|++.
T Consensus 359 ~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~-~~SG-~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 359 DTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVN-DEPHVPFGGV-KASG-GGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCCCCCc-cccc-CCccchHHHHHHhhceeEEe
Confidence 34678999999999999999999999999999999854 4456667664 7776 34468999999999999975
No 17
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=98.19 E-value=2e-06 Score=74.04 Aligned_cols=69 Identities=16% Similarity=0.230 Sum_probs=62.9
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++++.+...||.--+-|+ ++.| ||.||++++..|++.
T Consensus 386 ~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~--G~~~--g~~~l~~ft~~k~v~ 454 (455)
T cd07120 386 DYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGL--GRLH--GVAALEDFIEYKHIY 454 (455)
T ss_pred CCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccccc--Cccc--hHHHHHHHhceeEEe
Confidence 46799999999999999999999999999999999988888998888888 4555 999999999999985
No 18
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=98.04 E-value=6e-06 Score=68.67 Aligned_cols=70 Identities=21% Similarity=0.188 Sum_probs=62.4
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccc-cCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRF-ADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRF-sDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.++++.+++++..|+||.++.. .++..||..-+-|+ .+.+||.|++.++..|.+.
T Consensus 361 ~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~----g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 361 TEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGI----GREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCcCcC----CccchHHHHHHhhceEEEE
Confidence 3568999999999999999999999999999999999 66777887777665 4789999999999999885
No 19
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=97.91 E-value=1.2e-05 Score=67.85 Aligned_cols=70 Identities=21% Similarity=0.137 Sum_probs=56.8
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.+++|.+++++..|+||.++.......||..-+=|+ ....||.||++++..|.+.
T Consensus 381 ~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~----G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 381 TPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGL----GREGGKEGLEEYLETKYVS 450 (451)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcC----CccchHHHHHHHhceeEEe
Confidence 457899999999999999999999999999999986654545654333333 3456999999999999874
No 20
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=97.90 E-value=1.7e-05 Score=68.00 Aligned_cols=71 Identities=20% Similarity=0.286 Sum_probs=57.9
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+|+.+|.|+|.+.+++|.++++++.|+||.++- .+.....+|..-....+| .+||-||++++..|++..
T Consensus 393 ~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~~PfGG~k~SG~G~--~~g~~~l~~~t~~k~~~~ 463 (465)
T cd07151 393 EYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPV-NDEPHVPFGGEKNSGLGR--FNGEWALEEFTTDKWISV 463 (465)
T ss_pred CccceEEEECCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCCCCCcccccCCc--CChHHHHHHhhceEEEEe
Confidence 56799999999999999999999999999999874 344455666554444455 479999999999999864
No 21
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=97.78 E-value=3.2e-05 Score=66.20 Aligned_cols=70 Identities=16% Similarity=0.106 Sum_probs=60.3
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeeccccc-ccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSR-FADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTR-FsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+||.+|.|+|.+.+++|.+++++..|+||.++. +.++..||..-+-||... .|+-||++++..|++..
T Consensus 402 ~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~----~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 402 NYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQ----GIGDALRSMTRRKGIVI 472 (473)
T ss_pred CCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCC----ChHHHHHHhhceeEEEE
Confidence 45799999999999999999999999999999874 456678998888888754 47789999999999853
No 22
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=97.74 E-value=3.2e-05 Score=65.86 Aligned_cols=71 Identities=14% Similarity=0.120 Sum_probs=53.8
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
...+|+.+|.|+|.+.+++|.+++++..|+||.++.......||.==+=|+ ....||.||++++..|++.+
T Consensus 386 ~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~~~~k~i~~ 456 (456)
T cd07110 386 SEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGI----GRELGEWGLDNYLEVKQITR 456 (456)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccC----CccchHHHHHHhcceeEEeC
Confidence 367899999999999999999999999999998875443333432112222 22348999999999999863
No 23
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=97.73 E-value=3.8e-05 Score=65.45 Aligned_cols=71 Identities=17% Similarity=0.133 Sum_probs=58.2
Q ss_pred CCCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 35 FMNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 35 ~~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
....+|+.+|.|+|.+.+++|.+++|+..|+||.++++..+..||.--+=|+ ....|+-|+++.+..|.+.
T Consensus 386 ~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~----G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 386 DSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGI----GRENGIEAIREYTQTKSVW 456 (457)
T ss_pred CCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcC----CccchHHHHHHHhceeEEe
Confidence 3467899999999999999999999999999999999888877864333332 2345899999999998874
No 24
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=97.70 E-value=3.7e-05 Score=66.38 Aligned_cols=65 Identities=20% Similarity=0.295 Sum_probs=49.8
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWV 108 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyv 108 (135)
.+.+||.+|.|+|.+.+++|.+++|++.|+||+++- . ..++| |.--++..--||=| |+|++.|-+
T Consensus 356 ~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~~--~--~~p~g---G~k~s~~~~~~~~~-~~~~~~~~~ 420 (429)
T cd07121 356 HGNRHTAIIHSKNVENLTKMARAMQTTIFVKNGPSY--A--GLGVG---GEGYTTFTIAGPTG-EGLTSARTF 420 (429)
T ss_pred cCCCceEEEecCCHHHHHHHHhhCCceEEEEcCCCc--C--ccccC---CCccceEEecCCcC-cCccChhhh
Confidence 477999999999999999999999999999998874 2 34444 44445555566777 777766543
No 25
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=97.70 E-value=4.4e-05 Score=65.52 Aligned_cols=71 Identities=20% Similarity=0.138 Sum_probs=56.9
Q ss_pred CCCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 35 FMNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 35 ~~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
....+||.+|.|+|.+.+++|.++++++.|+||.++++.+...||.--+=| -..--|+-|+++.+..|-+.
T Consensus 405 ~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG----~G~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 405 DTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSG----FGRELGEEGLEEYTQVKAVT 475 (476)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCc----CCccchHHHHHHhhceeEEe
Confidence 345789999999999999999999999999999999988877775422222 23345788899999988764
No 26
>PLN02278 succinic semialdehyde dehydrogenase
Probab=97.67 E-value=6.7e-05 Score=65.55 Aligned_cols=73 Identities=16% Similarity=0.124 Sum_probs=58.6
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeCC
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGD 112 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~ 112 (135)
...+++.+|.|+|.+.+++|.+++|+..|+||..+-..+...||.--+=|+ ...+||-||++++..|.+..++
T Consensus 424 ~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~G~~~l~~ft~~k~i~~~~ 496 (498)
T PLN02278 424 TEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGL----GREGSKYGIDEYLEIKYVCLGN 496 (498)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcC----CccchHHHHHHhheeEEEEEec
Confidence 346799999999999999999999999999998665444445654434443 3457999999999999998754
No 27
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=97.62 E-value=8.4e-05 Score=63.28 Aligned_cols=71 Identities=17% Similarity=0.154 Sum_probs=60.5
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
...+||.+|.|+|.+.+++|.+++++..|+||.++++.++..||.--+=|+ ....|+-|+++.+..|-+..
T Consensus 381 ~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~----G~~~g~~~~~~f~~~k~~~~ 451 (453)
T cd07115 381 TEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGF----GREMGREALDEYTEVKSVWV 451 (453)
T ss_pred CCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccC----CcCchHHHHHHhhceEEEEE
Confidence 356899999999999999999999999999999999998888876444443 23578999999999998754
No 28
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=97.59 E-value=0.0001 Score=62.62 Aligned_cols=71 Identities=17% Similarity=0.238 Sum_probs=55.4
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.+++|.+++++..|+||.++-.. .+...+|-.=.-..++ ..|+-||++++..|.+.
T Consensus 361 ~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~~-~~~~PfgG~~~SG~G~--~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 361 SEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHD-EPTLPHGGVKSSGYGR--FNGKWGIDEFTETKWIT 431 (432)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCCcccccccc--cChHHHHHHhhceEEEe
Confidence 35689999999999999999999999999999987443 3344455432222333 57999999999999875
No 29
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=97.58 E-value=9.1e-05 Score=62.97 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=58.6
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++++.++..||.--+=|+ ....|+-|+++++..|.+.
T Consensus 377 ~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~----G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 377 EYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGI----GVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred CCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccc----CccchHHHHHHhhceeEEe
Confidence 55899999999999999999999999999999999988888875333343 3456899999999999874
No 30
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=97.53 E-value=0.00011 Score=62.64 Aligned_cols=69 Identities=20% Similarity=0.063 Sum_probs=53.2
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+|+.+|.|+|.+.+++|.+++|+..|+||.++.-.....||.--+=|+ ...+||.||+++|..|-+.
T Consensus 399 ~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~----G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 399 EYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGL----GGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred CCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccC----CcCchHHHHHHHhceeEEe
Confidence 34899999999999999999999999999999875443434442112222 2357999999999999874
No 31
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=97.53 E-value=0.00012 Score=62.77 Aligned_cols=70 Identities=19% Similarity=0.205 Sum_probs=56.4
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
-..+++.+|.|+|.+.+++|.+++++..|+||.++.+.....||.=-+=|+ .-..||-||++++..|.+.
T Consensus 389 ~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~----G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 389 SDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGL----GRENGIEGLEEFLETKSIA 458 (459)
T ss_pred CCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccC----CCCchHHHHHHhhceeEEe
Confidence 356899999999999999999999999999999998776666763112222 2236899999999999885
No 32
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=97.51 E-value=0.00013 Score=63.34 Aligned_cols=70 Identities=17% Similarity=0.119 Sum_probs=58.9
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+|+.+|.|+|.+.+++|.++++++.|+||.++++.++..||.=-+=|+ ....|+-||++++..|.+..
T Consensus 410 ~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~G~~~l~~~t~~k~i~~ 479 (481)
T cd07143 410 TYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGI----GRELGEYALENYTQIKAVHI 479 (481)
T ss_pred CCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccccc----CcccHHHHHHHHhCeEEEEE
Confidence 46799999999999999999999999999999999988877764323333 35678999999999998864
No 33
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=97.44 E-value=0.00018 Score=61.86 Aligned_cols=72 Identities=18% Similarity=0.168 Sum_probs=55.4
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeCC
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGD 112 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~ 112 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.+.......-||.--+=|+ ...-||.||++++..|.+....
T Consensus 403 ~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 403 PYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGI----GRELGPTGLEEYQETKHININL 474 (482)
T ss_pred CCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcC----CccchHHHHHHHhceEEEEEec
Confidence 57899999999999999999999999999998754443334543222232 2234899999999999998754
No 34
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=97.38 E-value=0.00027 Score=61.72 Aligned_cols=72 Identities=15% Similarity=0.077 Sum_probs=59.2
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccc-cccCCccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASS-RFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNAST-RFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
...+|+.+|.|+|.+.+++|.+++|++.|+||.++ .+.++..||.-=.-||.. --|+-|+++.+..|.+...
T Consensus 415 ~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~i~~~ 487 (496)
T PLN00412 415 SNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGS----QGITNSINMMTKVKSTVIN 487 (496)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCC----CChHHHHHHhcceEEEEEe
Confidence 35679999999999999999999999999999986 566777785433477754 3578999999999988764
No 35
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=97.37 E-value=0.00027 Score=60.09 Aligned_cols=70 Identities=14% Similarity=0.116 Sum_probs=57.0
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeeccccccc-CCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFA-DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFs-DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.+++|.+++|+..|+||.++++. ++..||.==+=|+ ...-|+-||++.+..|.+.
T Consensus 381 ~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~----G~~~g~~~~~~~~~~k~i~ 451 (452)
T cd07147 381 SKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGI----GREGVRYAIEEMTEPRLLV 451 (452)
T ss_pred CCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCcccccc----CCCChHHHHHHhcceeEEe
Confidence 34789999999999999999999999999999998874 6667774333333 3456889999999998774
No 36
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=97.36 E-value=0.00024 Score=61.35 Aligned_cols=70 Identities=17% Similarity=0.110 Sum_probs=59.0
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++++.++..||.--+=|+ ...-|+-||++.+..|.+..
T Consensus 408 ~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~~~~k~~~~ 477 (479)
T cd07116 408 LYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGI----GRENHKMMLDHYQQTKNLLV 477 (479)
T ss_pred cccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcC----CccChHHHHHHhhceEEEEE
Confidence 36799999999999999999999999999999999988877875444443 23458899999999999865
No 37
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=97.36 E-value=0.00028 Score=60.24 Aligned_cols=75 Identities=15% Similarity=0.048 Sum_probs=57.4
Q ss_pred CCCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeCCc
Q psy11680 35 FMNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGDG 113 (135)
Q Consensus 35 ~~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~G 113 (135)
....+|+.+|.|+|.+.+++|.+++|+..|+||.........-||.==+=|+ ....|+-|+++.+..|.+....|
T Consensus 383 ~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~----G~~~g~~~~~~f~~~k~~~~~~~ 457 (457)
T cd07090 383 DTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGF----GRENGTAALEHYTQLKTVYVEMG 457 (457)
T ss_pred CCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcC----CccchHHHHHHHhCeEEEEEeCC
Confidence 4566999999999999999999999999999998665554444543223343 23458999999999999876443
No 38
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=97.27 E-value=0.00043 Score=59.04 Aligned_cols=70 Identities=19% Similarity=0.139 Sum_probs=56.5
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccC-CccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFAD-GYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsD-G~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.+++|.+++++..|+||.++++.. +.-||.=-+=|+ ....|+-||++.+..|.+.
T Consensus 385 ~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~----G~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 385 TEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGI----GREGVRYTMLEMTEEKTIV 455 (456)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccC----CcCchHHHHHHhhceeEEe
Confidence 356899999999999999999999999999999988763 344554334443 3466899999999999874
No 39
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=97.24 E-value=0.00045 Score=58.78 Aligned_cols=69 Identities=20% Similarity=0.244 Sum_probs=54.4
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+++.+|.|+|.+.+++|.+++++..|+||.+++.....-||.=-+=|+ ++ --||-||++++..|.+.
T Consensus 360 ~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~--G~--~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 360 PFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGY--GR--ELGRFGIREFVNIKTVW 428 (429)
T ss_pred CcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccccc--CC--cchHHHHHHhcceeEEe
Confidence 55799999999999999999999999999999997654444543113332 22 33899999999999875
No 40
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=97.24 E-value=0.00047 Score=59.48 Aligned_cols=70 Identities=24% Similarity=0.189 Sum_probs=57.4
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+|+.+|.|+|.+.+++|.++++++.|+||.+++...+.-||.--+=|+ ....|+-||++.+..|.+..
T Consensus 413 ~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~t~~k~v~~ 482 (484)
T cd07144 413 TYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGI----GRELGEYGLETYTQTKAVHI 482 (484)
T ss_pred CCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcC----CCCchHHHHHHhhceEEEEE
Confidence 56799999999999999999999999999999998776666664334343 23558899999999998754
No 41
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=97.22 E-value=0.00045 Score=59.30 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=55.7
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccC-CccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFAD-GYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsD-G~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.+++|.++++++.|+||.++++.. +..||.-=+=|+ ...-|+-||++++..|.+.
T Consensus 384 ~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~----G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 384 LPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGY----GTGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred CCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhccc----CCCchHHHHHHhhceeEEe
Confidence 445899999999999999999999999999999998764 345654323332 2466789999999999874
No 42
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=97.21 E-value=0.00048 Score=58.58 Aligned_cols=70 Identities=24% Similarity=0.217 Sum_probs=57.2
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccc-cCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRF-ADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRF-sDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.+++|.+++++..|+||.++++ .++..||.==+=|+ ...-|+-||++++..|.+.
T Consensus 382 ~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~----G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 382 TDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGV----GREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCcccccc----CcCChHHHHHHHhceeEEe
Confidence 3578999999999999999999999999999999887 45666764333343 3567899999999999874
No 43
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=97.17 E-value=0.00058 Score=57.94 Aligned_cols=70 Identities=14% Similarity=0.121 Sum_probs=55.3
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+||.+|.|+|.+.+++|.+++++..|+||.++....+..||.==+=| ...--|+-|+++.+..|.+.
T Consensus 382 ~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG----~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 382 SEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSG----RGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred CCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccc----cCccchHHHHHHHhceeEEe
Confidence 34689999999999999999999999999999998766565565311222 34455889999999988764
No 44
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=97.17 E-value=0.0007 Score=58.48 Aligned_cols=74 Identities=16% Similarity=0.025 Sum_probs=54.4
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCC-ccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADG-YRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG-~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
-..+|+.+|.|+|.+.+++|.+++|++.|+||..+...+. ..||.-=+=|+ ++-+.-|+-||++.+..|.+...
T Consensus 402 ~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~--G~~~~~g~~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 402 SPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFF--GDHHIYGKQGTHFYTRGKTVTTR 476 (477)
T ss_pred CCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccC--CCCccChHHHHHHhcCeeEEEEe
Confidence 3468999999999999999999999999999987655543 23442222222 11123489999999999988654
No 45
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=97.15 E-value=0.00072 Score=58.02 Aligned_cols=71 Identities=14% Similarity=0.117 Sum_probs=55.2
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccc-cCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRF-ADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRF-sDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+|+.+|.|+|.+.+++|.+++|++.|+||.++-. ..+..||.=-+=|+.. ..-|+-||++.+..|.|..
T Consensus 404 ~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~---~~~g~~~~~~f~~~k~i~~ 475 (478)
T cd07131 404 EYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH---REAGTTALDAFTEWKAVYV 475 (478)
T ss_pred CCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCC---cCCcHHHHHHhhheEEEEE
Confidence 578999999999999999999999999999998754 3455565433444321 2237999999999998864
No 46
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=97.14 E-value=0.00071 Score=57.88 Aligned_cols=71 Identities=24% Similarity=0.139 Sum_probs=58.9
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
...+|+-+|.|+|.+.+++|.+++++..|+||.+++..++..||.==+=|+ ....|+-|+++.+..|.+..
T Consensus 384 ~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~----G~~~g~~~~~~~~~~k~v~~ 454 (456)
T cd07107 384 VEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGI----GREECLEELLSYTQEKNVNV 454 (456)
T ss_pred CCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccC----CcCchHHHHHHhhceEEEEE
Confidence 467899999999999999999999999999999999888877764323332 33568999999999998864
No 47
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=97.14 E-value=0.0009 Score=58.74 Aligned_cols=72 Identities=18% Similarity=0.075 Sum_probs=54.8
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeeccccccc--CCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFA--DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFs--DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
...+||.+|.|+|.+.+++|.+++++..|+||.++... ...-||.--.=|+. + ..-|+-|+++.+..|-+..
T Consensus 433 ~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G--~-~~gg~~~~~~ft~~k~i~~ 506 (518)
T cd07125 433 TGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTG--P-KAGGPNYLLRFGNEKTVSL 506 (518)
T ss_pred CCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCC--c-ccccHHHHHHhcceEEEEE
Confidence 36789999999999999999999999999999987543 22345543233331 0 2346999999999998876
No 48
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=97.12 E-value=0.00062 Score=59.10 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=57.6
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++++.++..||.=-+=|+. ..-|+-||++.+..|.+..
T Consensus 409 ~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~~~~k~v~~ 478 (480)
T cd07559 409 EYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIG----RETHKMMLDHYQQTKNILV 478 (480)
T ss_pred CCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCC----ccChHHHHHHhhceEEEEE
Confidence 457999999999999999999999999999999998888777743333332 2347899999999998764
No 49
>PLN02467 betaine aldehyde dehydrogenase
Probab=97.10 E-value=0.00073 Score=59.44 Aligned_cols=71 Identities=15% Similarity=0.049 Sum_probs=54.5
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++......-||.==.=| -...-|+.||++++..|++...
T Consensus 418 ~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG----~G~~~G~~~l~~ft~~k~i~~~ 488 (503)
T PLN02467 418 HYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSG----FGRELGEWGLENYLSVKQVTKY 488 (503)
T ss_pred CCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCc----CCCcchHHHHHHhhCeEEEEEe
Confidence 4689999999999999999999999999999877433333344211112 2235579999999999999983
No 50
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=97.04 E-value=0.00077 Score=58.22 Aligned_cols=69 Identities=22% Similarity=0.231 Sum_probs=56.9
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||..+++.+..-||.--+=|+ ....|+-||++.|..|.++
T Consensus 407 ~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 407 KYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGI----GREKGIYALNNYLQVKAVV 475 (476)
T ss_pred CCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcC----CccchHHHHHHhhheeEEe
Confidence 45799999999999999999999999999999988887766764333343 3356899999999999774
No 51
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=97.00 E-value=0.0011 Score=58.03 Aligned_cols=71 Identities=15% Similarity=0.074 Sum_probs=56.3
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
...+||.+|.|+|.+.+++|.+++|++.|+||..+......-||.--+=| -....|+-||++.+..|.|..
T Consensus 421 ~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG----~G~~~g~~~l~~ft~~k~v~~ 491 (494)
T PRK09847 421 SQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSG----NGRDKSLHALEKFTELKTIWI 491 (494)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccc----cCccchHHHHHHhhceEEEEE
Confidence 35689999999999999999999999999999977666555555322223 234568899999999998864
No 52
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=96.99 E-value=0.001 Score=59.29 Aligned_cols=72 Identities=21% Similarity=0.200 Sum_probs=58.9
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
...+|+.+|.|+|.+.+++|.+++|+..|+||..+++....-||.--+=|+ ....|+-||++.+..|.++..
T Consensus 460 ~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~----G~~~G~~gl~~ft~~k~v~~~ 531 (538)
T PLN02466 460 TRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGI----GREKGIYSLNNYLQVKAVVTP 531 (538)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCcc----CcccHHHHHHHhcceEEEEEe
Confidence 467899999999999999999999999999998887765555664333343 235689999999999998774
No 53
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=96.96 E-value=0.0012 Score=55.99 Aligned_cols=71 Identities=14% Similarity=0.076 Sum_probs=56.4
Q ss_pred CCCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 35 FMNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 35 ~~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
....+|+.+|.|+|.+.+++|.+++|+..|+||.++.+.....||.--+=|+ ....|+-|+++.+..|.+.
T Consensus 379 ~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~----G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 379 DVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGY----GKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcC----CCCChHHHHHHHheeeEEe
Confidence 3467899999999999999999999999999999988765555653222232 3356889999999998874
No 54
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=96.95 E-value=0.0013 Score=55.69 Aligned_cols=70 Identities=21% Similarity=0.162 Sum_probs=55.8
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeeccccccc-CCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFA-DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFs-DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+||.+|.|+|.+.+++|.++++++.|+||.++.+. ++..||.-=+=|+ ....|+-||++.+..|.+.
T Consensus 382 ~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~----G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 382 SPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGT----GREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred CCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCcccccc----CCCChHHHHHHhhceeEEe
Confidence 44679999999999999999999999999999998764 5556664333343 3457888999999988774
No 55
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=96.93 E-value=0.0011 Score=56.71 Aligned_cols=69 Identities=19% Similarity=0.191 Sum_probs=53.6
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.+++|.+++|+..|+||.++ .....-||. ++-| +-....|+-||+++|..|.+.
T Consensus 402 ~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG---~k~S-G~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 402 SDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGG---FKQS-GIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCC---cccc-cCCccchHHHHHHHhceeEEe
Confidence 35689999999999999999999999999999987 332334442 1222 234577899999999999875
No 56
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=96.93 E-value=0.0015 Score=56.47 Aligned_cols=74 Identities=14% Similarity=-0.014 Sum_probs=57.5
Q ss_pred CCCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeCC
Q psy11680 35 FMNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGD 112 (135)
Q Consensus 35 ~~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~ 112 (135)
....+||.+|.|+|.+.+++|.+++|+..|+||.........-||.--+=|+ ...-|+-|+++.+..|.+....
T Consensus 405 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~~~~~~~~k~i~~~~ 478 (488)
T TIGR02299 405 DTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGI----GREGGTYSFDFYTETKNVALAL 478 (488)
T ss_pred CCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcC----CccchHHHHHHHhceEEEEEec
Confidence 3467899999999999999999999999999997765443445553223332 3456899999999999998744
No 57
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=96.93 E-value=0.0016 Score=56.20 Aligned_cols=71 Identities=27% Similarity=0.172 Sum_probs=53.4
Q ss_pred CCCceeEEeCCHHHHHHHHhhccceeEeecccccccCC-ccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 38 TLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADG-YRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG-~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
.+|+.+|.|+|.+.+++|.+++|+..|+||.++...++ ..||.--.=|+. +-+.-|+-||++.+..|-+..
T Consensus 405 ~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~~~g~~~~~~~~~~k~v~~ 476 (478)
T cd07085 405 YGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFG--DLHFYGKDGVRFYTQTKTVTS 476 (478)
T ss_pred CCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCC--CCcCChHHHHHHhcceEEEEE
Confidence 47999999999999999999999999999998655433 345532222321 112348999999999998764
No 58
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=96.92 E-value=0.0009 Score=57.66 Aligned_cols=70 Identities=19% Similarity=0.166 Sum_probs=53.0
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeeccccccc--CCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFA--DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFs--DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+++.+|.|+|.+.+++|.+++|++.|+||.++... ...-||.=-+=|+ .-..|+=||++.+..|.++
T Consensus 364 ~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 364 RDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGY----GAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred CCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCccccccCCCCCcCCcCcccC----CccccHhHHHHhccccccc
Confidence 45689999999999999999999999999999887543 3344553222232 2346889999999988764
No 59
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=96.88 E-value=0.0018 Score=55.89 Aligned_cols=72 Identities=14% Similarity=0.100 Sum_probs=54.9
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeeccccccc--CCccccCceEEEeecCCcccccccccccceEEEEEEeCC
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFA--DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGD 112 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFs--DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~ 112 (135)
..+|+.+|.|+|.+.+++|.++++++.|+||..+... +..-||.=-+=|+ ...-|+-||++.+..|.+....
T Consensus 355 ~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 355 EKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGM----GAYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred CCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCcccC----CCcccHHHHHHhccccEEEEcc
Confidence 3589999999999999999999999999999876332 3334553323332 2345889999999999998663
No 60
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=96.84 E-value=0.0018 Score=55.71 Aligned_cols=72 Identities=11% Similarity=0.128 Sum_probs=56.6
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
...+||.+|.|+|.+.+++|.+++|+..|+||.++.......||.--+=|+ ...-|+-||++.+..|.++..
T Consensus 402 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~~~~~t~~k~i~~~ 473 (475)
T PRK13473 402 SDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGY----GKDMSLYGLEDYTVVRHVMVK 473 (475)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccc----CccchHHHHHHHhceEEEEEe
Confidence 357899999999999999999999999999999887654445654333343 234478899999999988753
No 61
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=96.83 E-value=0.0015 Score=56.75 Aligned_cols=70 Identities=17% Similarity=0.133 Sum_probs=56.6
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+|+.+|.|+|.+.+.+|.+++++..|+||.+++..++..||.=-+=|+ ..--|+-|+++.+..|.+..
T Consensus 404 ~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~~~~ft~~k~v~~ 473 (475)
T cd07117 404 EYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGI----GRETHKSMLDAYTQMKNIYI 473 (475)
T ss_pred CcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcC----CCCchHHHHHHHhCeEEEEE
Confidence 45799999999999999999999999999999988887767764222222 34568899999999998753
No 62
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=96.81 E-value=0.0022 Score=55.59 Aligned_cols=72 Identities=15% Similarity=0.059 Sum_probs=55.8
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
...+||.+|.|+|.+.+++|.+++|+..|+||.-.......-||.=-+=|+ ....|+=|+++.+..|-|...
T Consensus 409 ~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~~~~ft~~k~i~~~ 480 (488)
T PRK13252 409 TEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGI----GRENGIATLEHYTQIKSVQVE 480 (488)
T ss_pred CCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcC----CcCChHHHHHHhcceEEEEEe
Confidence 356899999999999999999999999999998666554445553222232 234589999999999988764
No 63
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=96.77 E-value=0.002 Score=55.47 Aligned_cols=70 Identities=21% Similarity=0.197 Sum_probs=54.1
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccC-CccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFAD-GYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsD-G~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++...+ ..-||.=-.=|+.- ...|+-||++.+..|.+.
T Consensus 402 ~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~---~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 402 EFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGP---REQGEAALEFYTTIKTVY 472 (473)
T ss_pred CCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcc---cCCcHHHHHHhhceeEEe
Confidence 45799999999999999999999999999999987665 33455322222210 345899999999999875
No 64
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=96.77 E-value=0.0021 Score=55.51 Aligned_cols=70 Identities=17% Similarity=0.155 Sum_probs=54.7
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++......-||.--.=|+ ....|+-||++.+..|-+..
T Consensus 406 ~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~t~~k~v~~ 475 (477)
T cd07113 406 PFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGI----GREFGSAFIDDYTELKSVMI 475 (477)
T ss_pred CCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccC----CccchHHHHHHhhceEEEEE
Confidence 45799999999999999999999999999998876554445653322232 34558999999999998764
No 65
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=96.75 E-value=0.003 Score=55.15 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=35.2
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccC
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFAD 74 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsD 74 (135)
..+|+.+|.|+|.+.+++|.+++|+..|+||.++||.-
T Consensus 357 ~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~~~~ 394 (436)
T cd07122 357 GAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSSLGG 394 (436)
T ss_pred CCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCccccc
Confidence 46899999999999999999999999999999998643
No 66
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=96.72 E-value=0.0025 Score=55.20 Aligned_cols=71 Identities=15% Similarity=0.166 Sum_probs=54.3
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
-..+||.+|.|+|.+.+++|.+++++..|+||.++......-||.--+=|+ ....|+=||++.+..|-+..
T Consensus 389 ~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~G~~~l~~ft~~k~v~~ 459 (462)
T PRK13968 389 SEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGF----GRELSHFGLHEFCNIQTVWK 459 (462)
T ss_pred CCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccc----CcCchHHHHHHhcceeEEEE
Confidence 456799999999999999999999999999999865443334443222232 24557899999999998764
No 67
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=96.72 E-value=0.0024 Score=54.48 Aligned_cols=70 Identities=17% Similarity=0.083 Sum_probs=52.8
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccc-cccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASS-RFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNAST-RFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
-..+|+.+|.|+|.+.+++|.+++++..|+||..+ ....+.-||.=-.=|+ ....|+-|+++.+..|-+.
T Consensus 383 ~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~----G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 383 TDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGH----GREKGLEALYNYTQTKTVA 453 (454)
T ss_pred CCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcC----CccchHHHHHHHhceeEEe
Confidence 35689999999999999999999999999999877 3332334543223332 3355899999999998764
No 68
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=96.71 E-value=0.0022 Score=55.14 Aligned_cols=72 Identities=13% Similarity=0.023 Sum_probs=55.2
Q ss_pred CCCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCC-ccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 35 FMNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADG-YRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 35 ~~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG-~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
....+|+.+|.|+|.+.+++|.+++++..|+||.++++.+. .-||.--+=|+ -...-||-||++++..|.+.
T Consensus 378 ~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~---~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 378 STAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGL---GGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCC---CcccChHHHHHHHhceeEEe
Confidence 34578999999999999999999999999999999887643 34553222221 12345689999999998764
No 69
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=96.70 E-value=0.0028 Score=54.14 Aligned_cols=70 Identities=16% Similarity=0.103 Sum_probs=51.3
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccc-cccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVG-VEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvG-Le~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.+++|.++++++.|+||.++......-||.==+=|+. + --|+-+ +++.+..|.+.
T Consensus 386 ~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G--~--~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 386 SHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLG--R--EASLEGMLEHFTQKKTVN 456 (457)
T ss_pred CCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC--C--CccchhHHHHhhceEEEe
Confidence 4567999999999999999999999999999999865444456532222221 1 235545 68888888764
No 70
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=96.69 E-value=0.0026 Score=55.03 Aligned_cols=70 Identities=17% Similarity=0.005 Sum_probs=54.9
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+++.+|.|+|.+.+++|.++++++.|+||..........||.-=+=|+ ....|+=||++.+..|-+..
T Consensus 410 ~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~f~~~k~v~~ 479 (481)
T TIGR03216 410 PYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGI----GREGGVHSLEFYTELTNVCI 479 (481)
T ss_pred CccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcC----CcCchHHHHHHhhceEEEEE
Confidence 57899999999999999999999999999998665443445654334443 23568999999999998754
No 71
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=96.69 E-value=0.0026 Score=54.71 Aligned_cols=70 Identities=20% Similarity=0.097 Sum_probs=54.8
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.+++|.++++++.|+||..+......-||.-=+=| -....|+-||++++..|.+.
T Consensus 384 ~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG----~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 384 TVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSG----IGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred CCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCccccc----CCcCchHHHHHHHhceeEEe
Confidence 35689999999999999999999999999999988755444454322333 23456899999999998764
No 72
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=96.69 E-value=0.0032 Score=55.09 Aligned_cols=69 Identities=20% Similarity=0.074 Sum_probs=51.7
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCC--ccccCceEEEeecCCc-ccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADG--YRFGLGAEVGISTARI-HARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG--~~fGlGaEvGIST~Kl-HaRGPvGLe~Ltt~Kyvv 109 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++..... .-||.--+=|+ . ..-|+-|+++.+..|-+.
T Consensus 438 ~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~----G~~~~g~~~~~~~t~~k~v~ 509 (512)
T cd07124 438 EYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGT----GSKAGGPDYLLQFMQPKTVT 509 (512)
T ss_pred CCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccC----CCccCcHHHHHHhccEEEEE
Confidence 568999999999999999999999999999987643322 34443222222 2 234799999999998775
No 73
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=96.61 E-value=0.0043 Score=54.19 Aligned_cols=71 Identities=18% Similarity=0.128 Sum_probs=52.8
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccC-C-ccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFAD-G-YRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsD-G-~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+|+.+|.|+|.+.+++|.+++|+..|+||..+.... + ..||.=-.=|+. + ..-|+-+|++++..|.+..
T Consensus 426 ~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G--~-~~~g~~~l~~~~~~k~~~~ 498 (500)
T cd07083 426 PYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTN--A-KTGGPHYLRRFLEMKAVAE 498 (500)
T ss_pred CCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCC--C-cccCHHHHHHhhheeEEEE
Confidence 56899999999999999999999999999998765442 2 345431122221 0 2357999999999998753
No 74
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=96.60 E-value=0.0061 Score=52.94 Aligned_cols=71 Identities=10% Similarity=-0.077 Sum_probs=50.2
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccC-CccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFAD-GYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsD-G~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
...+|+.+|.|+|.+.+++|.+++++..|+||.+....+ ...||.--.=|+ ...-|.- ..+.+.+|++..=
T Consensus 397 ~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~----g~~~g~~-~~~~~~~~~~~~~ 468 (484)
T TIGR03240 397 TRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGN----HRPSAYY-AADYCAYPVASLE 468 (484)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccC----CCCCchH-HHhheeeeEEEEe
Confidence 356899999999999999999999999999998764433 334553222232 2334433 4448888888764
No 75
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=96.58 E-value=0.0035 Score=54.24 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=55.5
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
..+++.+|.|+|.+.+++|.+++++..|+||.++......-||.-=+=|+ ..--|+-||++.+..|.+..|
T Consensus 387 ~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~t~~k~v~~~ 457 (457)
T PRK09406 387 TFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGY----GRELSAHGIREFCNIKTVWIG 457 (457)
T ss_pred CCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccc----CccchHHHHHHhhceEEEEeC
Confidence 45799999999999999999999999999999886654444553222232 233478899999999999765
No 76
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=96.54 E-value=0.0025 Score=56.18 Aligned_cols=68 Identities=19% Similarity=0.088 Sum_probs=50.9
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccC-C-ccccCceEEEeecCCc-ccccccccccceEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFAD-G-YRFGLGAEVGISTARI-HARGPVGVEGLLTTKW 107 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsD-G-~~fGlGaEvGIST~Kl-HaRGPvGLe~Ltt~Ky 107 (135)
...+|+.+|.|+|.+.+++|.++++++.|+||..+.... + .-||.--+=|+ . ..-|+-+|++.+..||
T Consensus 430 ~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~----G~~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 430 TGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGT----GPKAGGPHYLYRLTQVQY 500 (500)
T ss_pred CCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccC----CCccCCHHHHHHHHhhcC
Confidence 456899999999999999999999999999998664432 2 24553323332 2 3667888888888776
No 77
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=96.54 E-value=0.0034 Score=54.04 Aligned_cols=69 Identities=13% Similarity=0.006 Sum_probs=54.9
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||..+.......||.-=+=|+ ...-|+-|+++.+..|-+.
T Consensus 393 ~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~----G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 393 VYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGN----GRDKSLHALDKYTELKTTW 461 (462)
T ss_pred CccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccC----CccchHHHHHHHhceeEEE
Confidence 45799999999999999999999999999999887765555654323332 2356899999999998764
No 78
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=96.54 E-value=0.0026 Score=62.36 Aligned_cols=73 Identities=18% Similarity=0.088 Sum_probs=57.5
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
.+.++|-+|.|+|.+.+++|.+++++..||||.++--.--+...||-+ |.|-..-++.||-+|+.+++.|.+-
T Consensus 944 t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~-~~SG~G~kaGGp~~L~~f~~~k~v~ 1016 (1208)
T PRK11905 944 TGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGE-GLSGTGPKAGGPLYLGRLVREAPTP 1016 (1208)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCC-CCCCCCCcCCCHHHHHHHhhcceee
Confidence 456899999999999999999999999999998653322112224443 7776555799999999999999774
No 79
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=96.54 E-value=0.004 Score=53.53 Aligned_cols=70 Identities=17% Similarity=0.025 Sum_probs=55.0
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+++.+|.|+|.+.+++|.++++++.|+||..+.......||.=-+=|+ ....|+-||++.+..|.+..
T Consensus 337 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~----G~~~g~~gl~~f~~~k~v~~ 406 (409)
T PRK10090 337 DYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGI----GGADGKHGLHEYLQTQVVYL 406 (409)
T ss_pred CCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccC----CccchHHHHHHhcceEEEEE
Confidence 45799999999999999999999999999998776554444553223343 34778999999999998753
No 80
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=96.53 E-value=0.0043 Score=53.68 Aligned_cols=71 Identities=15% Similarity=0.059 Sum_probs=54.5
Q ss_pred CCCCCceeEEeCCHHHHHHHHhh--ccceeEeecccc-cccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRK--VDSACVFHNASS-RFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~--VDSA~V~vNAST-RFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
...+|+.+|.|+|.+.+++|.++ ++++.|+||.++ ++..+.-||.--.=|+. .-.|+-|+++++..|.+..
T Consensus 402 ~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G----~~~g~~~~~~f~~~k~i~~ 475 (478)
T cd07086 402 VPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG----RESGSDAWKQYMRRSTCTI 475 (478)
T ss_pred CCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceEEEEE
Confidence 35689999999999999999999 999999999875 33345556543233432 2347789999999998865
No 81
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=96.53 E-value=0.0037 Score=54.09 Aligned_cols=70 Identities=17% Similarity=0.116 Sum_probs=56.0
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
-..+|+-+|.|+|.+.+++|.+++++..|+||.+.+......||.-=+=|+ ...-|+-|+++.+..|.+.
T Consensus 410 ~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~~~~ft~~k~v~ 479 (481)
T cd07141 410 TTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGN----GRELGEYGLQEYTEVKTVT 479 (481)
T ss_pred CCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcC----CccchHHHHHHHhheEEEE
Confidence 346899999999999999999999999999999888776666764333333 2245788999999998775
No 82
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=96.50 E-value=0.0039 Score=53.05 Aligned_cols=70 Identities=16% Similarity=0.010 Sum_probs=52.7
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+||.+|.|+|.+.+++|.+++++..|+||..+.-....-||.--+=| -....|+-|+++.+..|-+.
T Consensus 385 ~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG----~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 385 TPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASG----IGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCc----CCCCchHHHHHHHhceeEEe
Confidence 47789999999999999999999999999999887544333344321222 22345888999988888764
No 83
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=96.46 E-value=0.006 Score=53.53 Aligned_cols=69 Identities=16% Similarity=0.101 Sum_probs=52.5
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeeccccc-ccCC-ccccCceEEEeecCCc-ccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSR-FADG-YRFGLGAEVGISTARI-HARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTR-FsDG-~~fGlGaEvGIST~Kl-HaRGPvGLe~Ltt~Kyvv 109 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||..+- ..++ .-||.--.=|+ . +.-||-+|++.+..|.+.
T Consensus 437 ~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~----G~~~~g~~~l~~~~~~k~v~ 508 (511)
T TIGR01237 437 EYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGT----DSKAGGPDYLLQFMQPKTVT 508 (511)
T ss_pred CCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccC----CCcCCCHHHHHHhcceEEEE
Confidence 46899999999999999999999999999997654 3333 34553222232 2 245899999999999875
No 84
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=96.36 E-value=0.0055 Score=52.65 Aligned_cols=68 Identities=21% Similarity=0.207 Sum_probs=50.9
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||... ......||. ++-|- -...-|+-|+++.+..|.++
T Consensus 398 ~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG---~k~SG-~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 398 PYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGG---YKQSG-NGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred CCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCC---ccccc-CCccchHHHHHHhcceeEEe
Confidence 5689999999999999999999999999999752 322333443 23332 23355899999999888764
No 85
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=96.32 E-value=0.0038 Score=61.99 Aligned_cols=71 Identities=21% Similarity=0.096 Sum_probs=57.8
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKW 107 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Ky 107 (135)
-+.|+|-+|.|.|.+.+++|.+++++..||||...--..-+...||-+ |.|-..-++.||.+|..+++.+-
T Consensus 1041 t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~-g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1041 SGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGE-GLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred CCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCc-CcCCCCCCCCCHHHHHHHhccCC
Confidence 357899999999999999999999999999997664433223235554 88887778999999999998873
No 86
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=96.25 E-value=0.0075 Score=51.66 Aligned_cols=69 Identities=13% Similarity=0.089 Sum_probs=52.5
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccc--cC-CccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRF--AD-GYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRF--sD-G~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+|+.+|.|+|.+.+++|.+++|+..|+||.+.-. .+ ..-||.=-+=|+ ....|+-|+++.+..|.+.
T Consensus 382 ~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~----G~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 382 DYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGL----GRRHGAEGLLKYTETQTVA 453 (454)
T ss_pred CCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCccccccc----CccchHHHHHHhcceEEEe
Confidence 578999999999999999999999999999986532 22 334543223333 3345899999999999875
No 87
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=96.20 E-value=0.0042 Score=53.37 Aligned_cols=66 Identities=14% Similarity=0.131 Sum_probs=46.5
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTT 105 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~ 105 (135)
...+||.+|.|+|.+.+++|.+++++..|+||..+......-||.--+=|+ ..--|+=||++.+..
T Consensus 401 ~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~----G~~~g~~~~~~~~~~ 466 (467)
T TIGR01804 401 TIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGI----GRENGKAGLAEYTEV 466 (467)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcc----CCCChHHHHHHHhcc
Confidence 356899999999999999999999999999999876654545553212222 112355566655543
No 88
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=96.19 E-value=0.0048 Score=53.94 Aligned_cols=66 Identities=18% Similarity=0.159 Sum_probs=51.0
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTK 106 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~K 106 (135)
..+|+.+|.|+|.+.+++|.+++++..|+||.++++....-||.-=+=|+ ...-|+-|+++.+..|
T Consensus 411 ~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~~~~~~~~k 476 (480)
T cd07111 411 PYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGF----GREGGKEGLYEYLRPS 476 (480)
T ss_pred CCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccC----CccchHHHHHHHhhcc
Confidence 46799999999999999999999999999999988765545553222233 3345788888887766
No 89
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=96.18 E-value=0.0079 Score=52.13 Aligned_cols=71 Identities=17% Similarity=0.048 Sum_probs=55.3
Q ss_pred CCCCCceeEEeCCHHHHHHHHhh--ccceeEeeccccccc-CCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRK--VDSACVFHNASSRFA-DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~--VDSA~V~vNASTRFs-DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
...+|+.+|.|+|.+.+++|.++ +++..|++|.++... .+.-||.-=+=|+ ....|+-|+++.+..|.+..
T Consensus 398 ~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~----G~~~g~~~~~~f~~~k~~~~ 471 (474)
T cd07130 398 VPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGG----GRESGSDAWKQYMRRSTCTI 471 (474)
T ss_pred CCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccC----CccchHHHHHHHhheEEEEE
Confidence 35689999999999999999987 999999999987554 4555654333343 24678899999999887654
No 90
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=96.15 E-value=0.0065 Score=51.84 Aligned_cols=70 Identities=17% Similarity=0.082 Sum_probs=53.2
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeeccccc--ccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSR--FADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTR--FsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+++.+|.|+|.+.+++|.+++++..|+||.++- ......||.=-+=| -....|+=||++.+..|.+.
T Consensus 354 ~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG----~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 354 RPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSG----MGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCccc----CCCccCHHHHHHhccceeec
Confidence 467899999999999999999999999999999852 22334455322222 23356888999999999875
No 91
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=96.11 E-value=0.0062 Score=52.50 Aligned_cols=69 Identities=19% Similarity=0.141 Sum_probs=53.0
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeeccccc--ccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSR--FADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTR--FsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+++.+|.|+|.+.+++|.+++++..|+||..+- ...+..||.--+=|+ ....|+-+|++.+..|.+.
T Consensus 361 ~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 361 PKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGF----GAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred CCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCcCcC----CccccHHHHHHhccCceee
Confidence 46899999999999999999999999999998654 224445654333333 2346788999999888774
No 92
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=96.07 E-value=0.0074 Score=51.83 Aligned_cols=70 Identities=17% Similarity=0.138 Sum_probs=53.8
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeeccccccc-C-CccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFA-D-GYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFs-D-G~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+|+.+|.|+|.+.+++|.+++++..|+||.++... + ..-||.-=+=|+ .-.-||=||++.|..|.++
T Consensus 361 ~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 361 KPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGI----GSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred CCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccC----CCcCcHHHHHHhcccceee
Confidence 45789999999999999999999999999999987532 3 334553222232 2346889999999999875
No 93
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=96.04 E-value=0.011 Score=52.14 Aligned_cols=73 Identities=8% Similarity=0.059 Sum_probs=54.9
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeeccccc-c-cC-CccccCceEEEeecCCcccccccccccceEEEEEEeCCc
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSR-F-AD-GYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGDG 113 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTR-F-sD-G~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~G 113 (135)
..+|+.+|.|+|.+.+++|.+++|++.|+||.++- . .+ ..-||.==+=|+. ...|+-||++.+..|-|.....
T Consensus 418 ~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ft~~k~v~~~~~ 493 (524)
T PRK09407 418 PYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLG----RRHGAEGLLKYTESQTIATQRV 493 (524)
T ss_pred CCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccC----ccchHHHHHHhCCeEEEEEccc
Confidence 56799999999999999999999999999998653 2 22 2234422222332 2358999999999999987643
No 94
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=95.97 E-value=0.012 Score=51.36 Aligned_cols=76 Identities=11% Similarity=0.043 Sum_probs=57.9
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeeccccccc--CCccccCceEEEeecCCcccccccccccceEEEEEEeCCc
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFA--DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGDG 113 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFs--DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~G 113 (135)
...++|.+|.|+|.+.+++|.+++++..|+||..+... ....||.--.=|+. ...|+=||++.+..|.+....+
T Consensus 354 ~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~v~~~~~ 429 (449)
T cd07136 354 RPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMG----SYHGKYSFDTFSHKKSILKKST 429 (449)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCccCcCcccCC----cccCHHHHHHhccceEEEEcCC
Confidence 34789999999999999999999999999999766432 23345543333432 3568999999999999987644
Q ss_pred ee
Q psy11680 114 HV 115 (135)
Q Consensus 114 q~ 115 (135)
.+
T Consensus 430 ~~ 431 (449)
T cd07136 430 WF 431 (449)
T ss_pred cC
Confidence 33
No 95
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=95.94 E-value=0.016 Score=49.77 Aligned_cols=70 Identities=19% Similarity=0.098 Sum_probs=53.5
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccc-ccc-CCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASS-RFA-DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNAST-RFs-DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+||.+|.|+|.+.+++|.+++|+..|+||... -.. .+.-||.= +-|= -....||=||++.+..|.+..
T Consensus 392 ~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~---k~SG-~G~~~g~~~~~~~~~~k~~~~ 463 (465)
T cd07098 392 EYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGV---KGSG-FGRFAGEEGLRGLCNPKSVTE 463 (465)
T ss_pred CCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCcc---cccc-CCccChHHHHHHhheeEEEEE
Confidence 5789999999999999999999999999999743 333 34456542 2222 345678899999999998753
No 96
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=95.77 E-value=0.02 Score=50.31 Aligned_cols=69 Identities=19% Similarity=0.091 Sum_probs=52.2
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccc-cccCC-ccccCceEEEeecCCc-ccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASS-RFADG-YRFGLGAEVGISTARI-HARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNAST-RFsDG-~~fGlGaEvGIST~Kl-HaRGPvGLe~Ltt~Kyvv 109 (135)
..+|+-+|.|+|.+.+++|.+++++..|+||..+ ...++ .-||.--+=|+ . +.-|+-+|++.+..|-|.
T Consensus 440 ~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~----G~~~gg~~~l~~ft~~k~v~ 511 (514)
T PRK03137 440 EYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGT----DSKAGGPDYLLLFLQAKTVS 511 (514)
T ss_pred CCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccC----CcccCCHHHHHHhceEEEEE
Confidence 4589999999999999999999999999999753 44333 34553223332 2 355788999999999774
No 97
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=95.66 E-value=0.014 Score=50.14 Aligned_cols=70 Identities=20% Similarity=0.140 Sum_probs=51.9
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccc--cccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASS--RFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNAST--RFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
...+++.+|.|+|.+.+++|.+++++..|+||.++ ......-||.=-+=|+ ....|+=|+++.+..|.+.
T Consensus 362 ~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~----G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 362 RPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGM----GAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCcCCCCcccC----CCcCCHHHHHHhcccceec
Confidence 35689999999999999999999999999999886 2222334543222232 3445888999999888774
No 98
>PLN02203 aldehyde dehydrogenase
Probab=95.58 E-value=0.025 Score=50.08 Aligned_cols=72 Identities=19% Similarity=0.126 Sum_probs=55.9
Q ss_pred CCCceeEEeCCHHHHHHHHhhccceeEeeccccc--ccCCccccCceEEEeecCCcccccccccccceEEEEEEeCCc
Q psy11680 38 TLMTRKYFLFSESTAADFQRKVDSACVFHNASSR--FADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGDG 113 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTR--FsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~G 113 (135)
.+.+-+|.|+|.+.+++|.+++++..|+||.++. ..+..-||.=-+=|+ ....|+-||++.+..|.+....-
T Consensus 372 ~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~----Gr~~g~~~l~~ft~~k~v~~~~~ 445 (484)
T PLN02203 372 KPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGF----GRYHGKYSFDTFSHEKAVLRRSL 445 (484)
T ss_pred CCceEEEEcCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccC----CccccHHHHHHhcceeEEEEcCc
Confidence 4788999999999999999999999999998753 224445653333343 23468999999999999998753
No 99
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=95.56 E-value=0.04 Score=48.07 Aligned_cols=71 Identities=11% Similarity=-0.027 Sum_probs=49.7
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCC-ccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADG-YRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG-~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
...+++.+|.|+|.+.+++|.+++++..|+||.++-..+. .-||.--.=|+ ...+-...++.|.+|.+..=
T Consensus 399 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~-----G~~~g~~~~~~~~~k~~~~~ 470 (487)
T PRK09457 399 TRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGN-----HRPSAYYAADYCAYPMASLE 470 (487)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccC-----CCCCchhHhhheeeeEEEEe
Confidence 3468999999999999999999999999999977654443 34553223232 22222444558888877654
No 100
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=95.23 E-value=0.028 Score=50.00 Aligned_cols=72 Identities=17% Similarity=0.178 Sum_probs=56.7
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeeccccccc--CCccccCceEEEeecCCcccccccccccceEEEEEEeCC
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFA--DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGD 112 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFs--DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~ 112 (135)
..+++-+|.|+|.+.+++|.+++++..|+||.++... ....||.--+=|+ ....|+-||++.+..|.|....
T Consensus 372 ~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~----Gr~~G~~gl~~ft~~K~v~~~~ 445 (484)
T PLN02174 372 PKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGM----GAYHGKFSFDAFSHKKAVLYRS 445 (484)
T ss_pred CCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCCcCcccc----CccchHHHHHHhcceEEEEECC
Confidence 4579999999999999999999999999999876432 3445665434443 2356889999999999998763
No 101
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=95.16 E-value=0.022 Score=48.77 Aligned_cols=69 Identities=23% Similarity=0.230 Sum_probs=54.3
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCc-cccCceEEEeecCCcccccccccccceEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGY-RFGLGAEVGISTARIHARGPVGVEGLLTTKWV 108 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~-~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyv 108 (135)
...+++-+|.|+|.+.++++.+++++..|+||.++...-.. -||.-=+=| .....|+-||++.+..|-|
T Consensus 393 ~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG----~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 393 SEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSG----IGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp SSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGE----ESEBSHHHHHHGTEEEEEE
T ss_pred cCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCccccc----CCcchHHHHHHHhCCccCC
Confidence 34579999999999999999999999999999997766655 455311222 2367789999999998865
No 102
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=95.09 E-value=0.038 Score=48.85 Aligned_cols=73 Identities=19% Similarity=0.150 Sum_probs=57.7
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeeccccc-c-cCCccccCceEEEeecCCcccccccccccceEEEEEEeCC
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSR-F-ADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGD 112 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTR-F-sDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~ 112 (135)
...+++.+|.|+|.+.+++|.++++|..|+||.++- . .+..-||.--+=|+ ..-.|.-|+++++..|.|+...
T Consensus 365 ~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG~----G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 365 RPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGM----GAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCCCCcCcccc----cccchHHHHHhccceeEEEEcc
Confidence 356899999999999999999999999999998862 2 34455664333333 3456899999999999998775
No 103
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=94.95 E-value=0.038 Score=48.34 Aligned_cols=37 Identities=8% Similarity=0.054 Sum_probs=33.7
Q ss_pred CCCCceeEEeCC---HHHHHHHHhhccceeEeeccccccc
Q psy11680 37 NTLMTRKYFLFS---ESTAADFQRKVDSACVFHNASSRFA 73 (135)
Q Consensus 37 ~s~HTd~IVTed---~~~a~~F~~~VDSA~V~vNASTRFs 73 (135)
..||+.+|.|+| .+.+++|.+++|+..|+||.++-+.
T Consensus 356 ~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~~~~ 395 (439)
T cd07081 356 GCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCSQG 395 (439)
T ss_pred CCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCcccc
Confidence 579999999999 9999999999999999999877443
No 104
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=94.80 E-value=0.044 Score=48.61 Aligned_cols=71 Identities=15% Similarity=0.053 Sum_probs=54.9
Q ss_pred CCCCceeEEeCCHHHHHHHHh--hccceeEeeccccccc-CCccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 37 NTLMTRKYFLFSESTAADFQR--KVDSACVFHNASSRFA-DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~--~VDSA~V~vNASTRFs-DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
..+++.+|.|+|.+.+++|.+ ++++..|++|.++-.. .+.-||.-=+=|+. .-.|+-||++.+..|.+...
T Consensus 421 ~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v~~~ 494 (508)
T PLN02315 421 PQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGG----REAGSDSWKQYMRRSTCTIN 494 (508)
T ss_pred CCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCC----ccchHHHHHHHhhEEEEEEe
Confidence 458999999999999999995 7999999999976554 34556643333432 34588999999999987663
No 105
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=94.72 E-value=0.051 Score=52.77 Aligned_cols=73 Identities=25% Similarity=0.126 Sum_probs=56.1
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccC-Cc-cccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFAD-GY-RFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsD-G~-~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
-+.++|-+|.|+|.+.+++|.+++++..||||.++--+- |. -||.--.-|+ + -.+-||-+|+.++..|-|...
T Consensus 952 t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~--G-~kaGG~~~L~~f~~~ktv~~~ 1026 (1038)
T PRK11904 952 TGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGT--G-PKAGGPHYLLRFATEKTVTVN 1026 (1038)
T ss_pred CCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCC--C-CccchHHHHHHHhceEEEEEc
Confidence 456899999999999999999999999999998765443 43 3554323332 1 137789999999999998763
No 106
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=94.68 E-value=0.027 Score=48.35 Aligned_cols=68 Identities=12% Similarity=0.008 Sum_probs=48.1
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCC-ccccCceEEEeecCCcccccccccccceEEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADG-YRFGLGAEVGISTARIHARGPVGVEGLLTTKWV 108 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG-~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyv 108 (135)
...+++-+|.|+|.+.+++|.+++++..|+||.++...+. ..||.-=+-|+ ...-|+-|++ .++.|++
T Consensus 361 ~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~----G~~~g~~~~~-~~~~~~~ 429 (431)
T cd07095 361 TRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGN----HRPSAYYAAD-YCAYPVA 429 (431)
T ss_pred CCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccC----CCCChHHHHH-HHhhhhc
Confidence 3458999999999999999999999999999988776553 23554333332 2334566666 5555543
No 107
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=94.62 E-value=0.054 Score=47.61 Aligned_cols=70 Identities=16% Similarity=0.109 Sum_probs=54.8
Q ss_pred CCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 38 TLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
.+-+-+|-|+|.+.++++.+++++..|+||..+...+..-||.-=+=|+ ...-|+-||++.|..|.+..|
T Consensus 412 ~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 412 FGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGL----GREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred CCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCcccccc----CcccHHHHHHHhhcceEEEEe
Confidence 4578999999999999999999999999997765554445654333343 234588999999999998765
No 108
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=94.56 E-value=0.06 Score=47.03 Aligned_cols=69 Identities=10% Similarity=0.134 Sum_probs=53.3
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVL 109 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv 109 (135)
..+.+-+|.|+|.+.+++|.+++++..|+||.........-||.--.=|+ ...-|+-||++.+..|.+.
T Consensus 402 ~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~t~~k~i~ 470 (472)
T TIGR03374 402 QYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGY----GKDMSLYGLEDYTVVRHIM 470 (472)
T ss_pred CCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcc----CccchHHHHHHhhceEEEE
Confidence 45789999999999999999999999999998776554444553222232 2356888999999999875
No 109
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=94.51 E-value=0.06 Score=47.45 Aligned_cols=70 Identities=16% Similarity=0.146 Sum_probs=54.8
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
..+++-+|.|+|.+.+++|.+++++..|+||..........||.--.=|+ ....|+-||++.+..|.+..
T Consensus 424 ~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~G~~~l~~ft~~k~v~~ 493 (501)
T PLN02766 424 KYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGF----GRDQGMDALDKYLQVKSVVT 493 (501)
T ss_pred CCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcC----CccchHHHHHHHhceEEEEE
Confidence 45799999999999999999999999999997654443444553223332 34678999999999998876
No 110
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=94.34 E-value=0.077 Score=46.15 Aligned_cols=72 Identities=8% Similarity=-0.056 Sum_probs=53.2
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCC-ccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADG-YRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG-~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
-..+++-+|.|+|.+.+++|.+++++..|+||..+-+... ..||.--+=|+.. ..-|+-||++.+..|-+..
T Consensus 398 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~---~~g~~~~l~~ft~~k~i~~ 470 (472)
T TIGR03250 398 TAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGY---KEGVQEAMKSFTNLKTYSL 470 (472)
T ss_pred CCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCC---CCChHHHHHHhhceEEEEE
Confidence 3568999999999999999999999999999977644432 3455322333321 2234889999999998764
No 111
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=93.54 E-value=0.12 Score=47.54 Aligned_cols=74 Identities=16% Similarity=0.090 Sum_probs=54.9
Q ss_pred CCCceeEEeCCHHHHHHHHhhccceeEeeccccccc-CCccccCceEEEeecCCcccccccccccceEEEEEEeCCc
Q psy11680 38 TLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFA-DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNGDG 113 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFs-DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G~G 113 (135)
-|.+-+|.|+|.+.|++|.+++++..|+||..+... .+.-||.=-+=|+ ++...-|+-|+++.+..|.|....-
T Consensus 517 yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~--G~~~~~G~~gl~~ft~~K~v~~~~~ 591 (604)
T PLN02419 517 YGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFA--GDLNFYGKAGVDFFTQIKLVTQKQK 591 (604)
T ss_pred CCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCC--CCCcccHHHHHHHhhCeEEEEEccC
Confidence 478999999999999999999999999999865333 3444553222222 1113458999999999999987653
No 112
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=93.43 E-value=0.15 Score=44.90 Aligned_cols=69 Identities=20% Similarity=0.134 Sum_probs=54.4
Q ss_pred CCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 38 TLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
-+-+-+|.|+|.+.+++|.+++++..|+||..+......-||.--+=|+ ....|+-||++.+..|.+..
T Consensus 416 ~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~----G~~~G~~~l~~ft~~k~v~~ 484 (486)
T cd07140 416 YGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGF----GKDLGEEALNEYLKTKTVTI 484 (486)
T ss_pred cCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcC----CCcchHHHHHHhhcEEEEEE
Confidence 3679999999999999999999999999998666554445654333343 23568999999999998864
No 113
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=92.48 E-value=0.28 Score=43.89 Aligned_cols=71 Identities=14% Similarity=0.163 Sum_probs=52.5
Q ss_pred CCCceeEEeCCHHHHHHHHhhcc--ceeEeeccccccc--CCccccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 38 TLMTRKYFLFSESTAADFQRKVD--SACVFHNASSRFA--DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~VD--SA~V~vNASTRFs--DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
.+++-+|.|+|.+.+.+|.++++ +..|+||..+-.. ...-||.=-+=|+. .+.-||-||++.+..|.+..-
T Consensus 446 ~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G---~~~~g~~~l~~f~~~k~v~~~ 520 (533)
T TIGR01236 446 YGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTN---DKAGGPLNLLRWTSARSIKET 520 (533)
T ss_pred cCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCC---cccCCHHHHHHhcceEEEEEE
Confidence 38999999999999999999977 9999999654322 23345532233321 156789999999999988653
No 114
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=91.74 E-value=0.25 Score=43.80 Aligned_cols=70 Identities=21% Similarity=0.152 Sum_probs=54.1
Q ss_pred CCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCc--cccCceEEEeecCCcccccccccccceEEEEEEeC
Q psy11680 38 TLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGY--RFGLGAEVGISTARIHARGPVGVEGLLTTKWVLNG 111 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~--~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~G 111 (135)
-|++-+|.|+|...+.+..+++++..|+||......+.. .||.=-.-|+- ...|+-++++.+..|++...
T Consensus 397 yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G----~~~g~~~~~~~~~~k~v~~~ 468 (472)
T COG1012 397 YGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLG----REGGKYGLEEFTEVKTVTIK 468 (472)
T ss_pred CCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhcceEEEEe
Confidence 479999999999999999999999999999875433333 34433333332 46689999999999999864
No 115
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=90.41 E-value=0.27 Score=42.25 Aligned_cols=65 Identities=18% Similarity=0.090 Sum_probs=46.5
Q ss_pred CCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEE
Q psy11680 38 TLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTK 106 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~K 106 (135)
.+-+-+|.|+|.+.++++.+++++..|+||.++......-||.-=+=|+ ....|+-|+++.+..|
T Consensus 384 ~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~----G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 384 VGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGL----GREGSKYGIEEYLETK 448 (448)
T ss_pred cCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccC----CccchHHHHHHHhccC
Confidence 3678999999999999999999999999999876554545553222232 2234666777665543
No 116
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=89.60 E-value=0.65 Score=41.27 Aligned_cols=70 Identities=13% Similarity=0.146 Sum_probs=52.7
Q ss_pred CCCceeEEeCCHHHHHHHHhhc--cceeEeeccccccc--CCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 38 TLMTRKYFLFSESTAADFQRKV--DSACVFHNASSRFA--DGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~V--DSA~V~vNASTRFs--DG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
-+.+-+|.|+|.+.+++|.+++ ++..|+||..+... ....||.--+=|+. .+.-||-+|++.+..|.+..
T Consensus 445 ~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~g---g~~~g~~~l~~~~~~k~~~~ 518 (522)
T cd07123 445 YALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTN---DKAGSPLNLLRWVSPRTIKE 518 (522)
T ss_pred cCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCC---cccCCHHHHHHhcceEEEEE
Confidence 5789999999999999999996 59999999765443 23456543333331 14568999999999998753
No 117
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=85.96 E-value=1.1 Score=40.83 Aligned_cols=42 Identities=24% Similarity=0.158 Sum_probs=38.0
Q ss_pred CCceeEEeCCHHHHHHHHhhc----------cceeEeecccccccCCccccC
Q psy11680 39 LMTRKYFLFSESTAADFQRKV----------DSACVFHNASSRFADGYRFGL 80 (135)
Q Consensus 39 ~HTd~IVTed~~~a~~F~~~V----------DSA~V~vNASTRFsDG~~fGl 80 (135)
++|-+|.|+|.+.+++|.+.+ ++..|+||-|+-|+|.--.|.
T Consensus 473 ~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~~~~~sg~ 524 (551)
T TIGR02288 473 AMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFSDFHGTGG 524 (551)
T ss_pred CceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCCCCCCCCC
Confidence 399999999999999999999 999999999999998755553
No 118
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=83.11 E-value=1.3 Score=38.48 Aligned_cols=66 Identities=11% Similarity=0.027 Sum_probs=45.3
Q ss_pred CCCCceeEEeCC--HHHHHHHHhhc--cceeEeeccc-ccccC--CccccC-ceEEEeecCCcccccccccccceE
Q psy11680 37 NTLMTRKYFLFS--ESTAADFQRKV--DSACVFHNAS-SRFAD--GYRFGL-GAEVGISTARIHARGPVGVEGLLT 104 (135)
Q Consensus 37 ~s~HTd~IVTed--~~~a~~F~~~V--DSA~V~vNAS-TRFsD--G~~fGl-GaEvGIST~KlHaRGPvGLe~Ltt 104 (135)
..+-+-+|.|+| .+.++++.+++ ++..|+||.. ++... +..||. --.-|++-. -+-|+-++++.|.
T Consensus 375 ~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~--~~~g~~~~~~~~~ 448 (454)
T cd07129 375 EGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRF--TSVGTAAIERFLR 448 (454)
T ss_pred CCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCcc--ccccHHHHHHhcc
Confidence 456789999999 79999999999 7999999965 44433 444555 334454422 1127777776653
No 119
>COG3688 Predicted RNA-binding protein containing a PIN domain [General function prediction only]
Probab=82.87 E-value=1.9 Score=35.24 Aligned_cols=64 Identities=23% Similarity=0.255 Sum_probs=50.0
Q ss_pred EEEEeecccCCCCCCCCCCCCceeEEeCCHHHHHHHHhh-------ccceeEeecccccccCCccccCceE
Q psy11680 20 FMVVLDSQYRPSNCPFMNTLMTRKYFLFSESTAADFQRK-------VDSACVFHNASSRFADGYRFGLGAE 83 (135)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~s~HTd~IVTed~~~a~~F~~~-------VDSA~V~vNASTRFsDG~~fGlGaE 83 (135)
..||.|.||-|.-=.-+...|-+.|-|+-.++|+.|+.+ ..+.-|.|=+|-|-.--.-||-||+
T Consensus 51 iivVFDA~~v~g~~~~~~~~~vsvvyT~~~ETADs~IEr~~~el~~~~t~~V~VaTSD~~EQ~~Ifg~GA~ 121 (173)
T COG3688 51 IIVVFDAHYVPGVGREYKNHRVSVVYTKEGETADSFIERYVAELRNAATHQVIVATSDRAEQWTIFGQGAL 121 (173)
T ss_pred EEEEEEccccccccccccccceEEEEecCCccHHHHHHHHHHHHhccccceEEEEeCchhhhhhhhccchH
Confidence 568999999999888888899999999999999999865 3444677777766555555666653
No 120
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=82.83 E-value=2.1 Score=37.16 Aligned_cols=69 Identities=9% Similarity=0.015 Sum_probs=46.8
Q ss_pred CCCCCceeEEeCCHHHHHHHHhhc-cceeEeeccc-ccccCC-ccccCce-EEEeecCCcccccccccccceEEEE
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRKV-DSACVFHNAS-SRFADG-YRFGLGA-EVGISTARIHARGPVGVEGLLTTKW 107 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~V-DSA~V~vNAS-TRFsDG-~~fGlGa-EvGIST~KlHaRGPvGLe~Ltt~Ky 107 (135)
-..+.+-+|.|+|.+.+++|.+++ ++..|+||.. +.+.+- ..||.|. +=|+.. ..-|+-+++..|...+
T Consensus 367 ~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~---~~~g~~~~~~~~~~~~ 439 (442)
T cd07084 367 MHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGA---GIGGPEAIKLVWRCHA 439 (442)
T ss_pred CCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCc---cccchHHhhheeeeee
Confidence 345789999999999999999999 9999999965 555553 3454432 333321 1115666676665444
No 121
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=82.67 E-value=2.1 Score=39.41 Aligned_cols=69 Identities=10% Similarity=0.025 Sum_probs=46.5
Q ss_pred CCCceeEEeCCHHHHHHHHhhcc--ceeEeecccccc------c---CCccccCceEEEeecCCcccc--cccccccceE
Q psy11680 38 TLMTRKYFLFSESTAADFQRKVD--SACVFHNASSRF------A---DGYRFGLGAEVGISTARIHAR--GPVGVEGLLT 104 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~VD--SA~V~vNASTRF------s---DG~~fGlGaEvGIST~KlHaR--GPvGLe~Ltt 104 (135)
-+-+-+|.|+|.+.++++.++++ +..|+||..+-. . ....||.==.=| +... |+-|+++.+.
T Consensus 427 ~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG-----~G~~~~g~~~~~~f~~ 501 (675)
T PRK11563 427 GSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAG-----GGEELGGLRGVKHYMQ 501 (675)
T ss_pred CCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCC-----CCccccchhHHHHhhe
Confidence 46788999999999999999998 999999964211 1 122333111112 1122 4778899998
Q ss_pred EEEEEeC
Q psy11680 105 TKWVLNG 111 (135)
Q Consensus 105 ~Kyvv~G 111 (135)
.|.+..-
T Consensus 502 ~k~~~~~ 508 (675)
T PRK11563 502 RTAVQGS 508 (675)
T ss_pred eeeeecC
Confidence 8887543
No 122
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=79.92 E-value=1.7 Score=38.92 Aligned_cols=69 Identities=9% Similarity=-0.092 Sum_probs=46.1
Q ss_pred CCCCceeEEeCCHHHHHHHHhhc--cceeEeeccccc---------ccCCccccCceEEEeecCCccc-ccccccccceE
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKV--DSACVFHNASSR---------FADGYRFGLGAEVGISTARIHA-RGPVGVEGLLT 104 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~V--DSA~V~vNASTR---------FsDG~~fGlGaEvGIST~KlHa-RGPvGLe~Ltt 104 (135)
.-+-+-+|.|+|.+.+++|.+++ ++..|+||..+. ...+.-||.==+=|+ .+- -|+-+|++.|.
T Consensus 425 ~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~----Gr~~g~~~~l~~~t~ 500 (521)
T PRK11903 425 QGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGG----GEELGGLRALAFYHR 500 (521)
T ss_pred CCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcC----CcccccHHHHHHHhc
Confidence 35678899999999999999999 999999997643 222334442111121 112 23678888888
Q ss_pred EEEEE
Q psy11680 105 TKWVL 109 (135)
Q Consensus 105 ~Kyvv 109 (135)
.|.+.
T Consensus 501 ~~~~~ 505 (521)
T PRK11903 501 RSAVQ 505 (521)
T ss_pred cceee
Confidence 65554
No 123
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=77.79 E-value=4.3 Score=37.61 Aligned_cols=69 Identities=10% Similarity=0.024 Sum_probs=47.7
Q ss_pred CCCceeEEeCCHHHHHHHHhhc--cceeEee-ccc-----cccc---CCccccCceEEEeecCCcccc--cccccccceE
Q psy11680 38 TLMTRKYFLFSESTAADFQRKV--DSACVFH-NAS-----SRFA---DGYRFGLGAEVGISTARIHAR--GPVGVEGLLT 104 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~V--DSA~V~v-NAS-----TRFs---DG~~fGlGaEvGIST~KlHaR--GPvGLe~Ltt 104 (135)
-+-+-+|.|+|.+.+++|.+++ ++..|+| |.. +... ....||.-=+=| +-.. |+-+|++.+.
T Consensus 415 ~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG-----~G~~~g~~~~l~~f~~ 489 (663)
T TIGR02278 415 GSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAG-----GGEELGGLRSVKHYMQ 489 (663)
T ss_pred CCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCc-----CCCccchHHHHHHhce
Confidence 4788999999999999999999 8999999 741 2121 122343211112 2223 3678999999
Q ss_pred EEEEEeC
Q psy11680 105 TKWVLNG 111 (135)
Q Consensus 105 ~Kyvv~G 111 (135)
.|.+..-
T Consensus 490 ~k~v~~~ 496 (663)
T TIGR02278 490 RTAIQGS 496 (663)
T ss_pred eEEEEcC
Confidence 9998765
No 124
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=73.76 E-value=4.9 Score=36.04 Aligned_cols=68 Identities=10% Similarity=-0.029 Sum_probs=46.8
Q ss_pred CCCceeEEeCCHHHHHHHHhhcc--ceeEeeccccc---------ccCCccccCceEEEeecCCccc-ccccccccceEE
Q psy11680 38 TLMTRKYFLFSESTAADFQRKVD--SACVFHNASSR---------FADGYRFGLGAEVGISTARIHA-RGPVGVEGLLTT 105 (135)
Q Consensus 38 s~HTd~IVTed~~~a~~F~~~VD--SA~V~vNASTR---------FsDG~~fGlGaEvGIST~KlHa-RGPvGLe~Ltt~ 105 (135)
-+-+-+|.|+|.+.+++|.++++ +..|+||..+. ...+.-||.==.=|+ ... -|+=||++.+..
T Consensus 423 ~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~----G~~~gg~~~l~~~~~~ 498 (513)
T cd07128 423 GSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGG----GEELGGLRGVKHYMQR 498 (513)
T ss_pred CCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCC----CcccccHHHHHHhhee
Confidence 46789999999999999999996 99999997531 122233432111121 122 157889999999
Q ss_pred EEEE
Q psy11680 106 KWVL 109 (135)
Q Consensus 106 Kyvv 109 (135)
|.+-
T Consensus 499 k~v~ 502 (513)
T cd07128 499 TAVQ 502 (513)
T ss_pred eeee
Confidence 9874
No 125
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=68.81 E-value=8.4 Score=34.54 Aligned_cols=39 Identities=8% Similarity=-0.052 Sum_probs=33.5
Q ss_pred CCCCceeEEeCCHHHHHHHHhhccceeEe--ecccccccCC
Q psy11680 37 NTLMTRKYFLFSESTAADFQRKVDSACVF--HNASSRFADG 75 (135)
Q Consensus 37 ~s~HTd~IVTed~~~a~~F~~~VDSA~V~--vNASTRFsDG 75 (135)
..+-+-+|.|+|.+.+++|.+++++..|| ||..+-...+
T Consensus 413 ~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~ 453 (489)
T cd07126 413 HAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQ 453 (489)
T ss_pred CCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCc
Confidence 35788899999999999999999999955 8877776666
No 126
>smart00070 GLUCA Glucagon like hormones.
Probab=67.39 E-value=3.1 Score=24.41 Aligned_cols=19 Identities=21% Similarity=0.097 Sum_probs=15.0
Q ss_pred CceeEEeCCHH------HHHHHHhh
Q psy11680 40 MTRKYFLFSES------TAADFQRK 58 (135)
Q Consensus 40 HTd~IVTed~~------~a~~F~~~ 58 (135)
|+|+|.|+|+. .|++|++-
T Consensus 1 Hadg~ftsdysk~L~~~~ar~fl~~ 25 (27)
T smart00070 1 HADGTFTSDYSKYLDQLAAKKFLQW 25 (27)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHH
Confidence 89999999984 57777754
No 127
>PF00123 Hormone_2: Peptide hormone; InterPro: IPR000532 A number of polypeptidic hormones, mainly expressed in the intestine or the pancreas, belong to a group of structurally related peptides [, ]. Once such hormone, glucagon is widely distributed and produced in the alpha-cells of pancreatic islets []. It affects glucose metabolism in the liver [] by inhibiting glycogen synthesis, stimulating glycogenolysis and enchancing gluconeogenesis. It also increases mobilisation of glucose, free fatty acids and ketone bodies, which are metabolites produced in excess in diabetes mellitus. Glucagon is produced, like other peptide hormones, as part of a larger precursor (preproglucagon), which is cleaved to produce glucagon, glucagon-like protein I and glucagon-like protein II []. The structure of glucagon itself is fully conserved in all known mammalian species []. Other members of the structurally similar group include glicentin precursor, secretin, gastric inhibitory protein, vasoactive intestinal peptide (VIP), prealbumin, peptide HI-27 and growth hormone releasing factor.; GO: 0005179 hormone activity, 0005576 extracellular region; PDB: 1T5Q_A 2OBU_A 2QKH_B 2L70_A 2L71_A 2B4N_A 1GCN_A 1D0R_A 3IOL_B 2RRI_A ....
Probab=56.46 E-value=2 Score=25.43 Aligned_cols=20 Identities=20% Similarity=0.122 Sum_probs=14.6
Q ss_pred CceeEEeCCHH------HHHHHHhhc
Q psy11680 40 MTRKYFLFSES------TAADFQRKV 59 (135)
Q Consensus 40 HTd~IVTed~~------~a~~F~~~V 59 (135)
|+|+|.|+|+. .|++|++-+
T Consensus 1 Hadg~ftsdys~~L~~~aak~fl~~L 26 (28)
T PF00123_consen 1 HADGTFTSDYSKYLDQLAAKKFLQWL 26 (28)
T ss_dssp -BTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHH
Confidence 88999999875 677777643
No 128
>PF10290 DUF2403: Glycine-rich protein domain (DUF2403); InterPro: IPR018807 This domain is found N-terminal to IPR018805 from INTERPRO. The function of this glycine-rich domain is unknown.
Probab=53.91 E-value=5.1 Score=27.87 Aligned_cols=26 Identities=27% Similarity=0.460 Sum_probs=18.1
Q ss_pred CccccCceEEEeecCCcccccccccccceEE
Q psy11680 75 GYRFGLGAEVGISTARIHARGPVGVEGLLTT 105 (135)
Q Consensus 75 G~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~ 105 (135)
|.-=-|.-|| -+|-||||-|.++--|
T Consensus 37 G~laPl~Eel-----SvhFRGPl~L~qfavY 62 (65)
T PF10290_consen 37 GPLAPLNEEL-----SVHFRGPLNLKQFAVY 62 (65)
T ss_pred CCCCCCCCcE-----EEEEeCCcEEEEEEEE
Confidence 3333455666 5699999999887654
No 129
>KOG2450|consensus
Probab=50.93 E-value=34 Score=31.93 Aligned_cols=72 Identities=19% Similarity=0.150 Sum_probs=50.9
Q ss_pred CCCCCCceeEEeCCHHHHHHHHhhccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe
Q psy11680 35 FMNTLMTRKYFLFSESTAADFQRKVDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN 110 (135)
Q Consensus 35 ~~~s~HTd~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~ 110 (135)
...-|-..++.|+|.+.|.++.+.+++..|++|++..+.-.-.||.=.+=||- -.-|--+|+.-|..|-|..
T Consensus 423 ~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~G----RE~g~~~l~~ytevKtv~v 494 (501)
T KOG2450|consen 423 NTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIG----RELGEYGLEAYTEVKTVTV 494 (501)
T ss_pred CCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCC----ccccHHHHhhcceeeEEEE
Confidence 34557889999999999999999999999999999999888888721111111 1223345555566665543
No 130
>KOG1506|consensus
Probab=42.32 E-value=29 Score=31.14 Aligned_cols=60 Identities=25% Similarity=0.331 Sum_probs=41.7
Q ss_pred CCCCCceeEEeCCHHHH--HHHHhh------cc-ceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEE
Q psy11680 36 MNTLMTRKYFLFSESTA--ADFQRK------VD-SACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTK 106 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a--~~F~~~------VD-SA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~K 106 (135)
+++.|+|.|-+++.... +.-+.. +| .....+|-|-||--| ||+|=.+||-+|
T Consensus 193 iS~QH~~~is~~~lr~~l~e~vik~viPa~~lDe~Tiyhl~PsGrFviG-------------------GP~GDAGlTGRK 253 (383)
T KOG1506|consen 193 ISTQHSEDITLDDLRAELKEKVIKPVIPAKYLDEKTIYHLNPSGRFVIG-------------------GPQGDAGLTGRK 253 (383)
T ss_pred EecccCccccHHHHHHHHHHhhhhhcCcHhhcCccceEEecCCccEEec-------------------CCCcccccccce
Confidence 56789999988875432 233322 23 455667888888765 789999999999
Q ss_pred EEEeCCce
Q psy11680 107 WVLNGDGH 114 (135)
Q Consensus 107 yvv~G~Gq 114 (135)
-+|.--|-
T Consensus 254 IIvDtYGG 261 (383)
T KOG1506|consen 254 IIVDTYGG 261 (383)
T ss_pred EEEeccCc
Confidence 98875443
No 131
>KOG2449|consensus
Probab=35.72 E-value=29 Score=28.08 Aligned_cols=31 Identities=19% Similarity=0.108 Sum_probs=26.9
Q ss_pred CCceeEEeCCHHHHHHHHhhccceeEeeccc
Q psy11680 39 LMTRKYFLFSESTAADFQRKVDSACVFHNAS 69 (135)
Q Consensus 39 ~HTd~IVTed~~~a~~F~~~VDSA~V~vNAS 69 (135)
+---.|+|.|-+.+++|.+++|...+=+|..
T Consensus 111 gn~t~i~Tsn~atark~~~e~~a~qig~~~~ 141 (157)
T KOG2449|consen 111 GNGTAIFTSNGATARKFCHEPDAGQIGANVP 141 (157)
T ss_pred CceeEEEecCcHHhhhhhcCCCccceecccc
Confidence 4567899999999999999999988877754
No 132
>PRK14741 spoVM stage V sporulation protein M; Provisional
Probab=34.09 E-value=21 Score=21.21 Aligned_cols=8 Identities=75% Similarity=1.148 Sum_probs=6.4
Q ss_pred ceeeEeeE
Q psy11680 3 KFYSIKLY 10 (135)
Q Consensus 3 ~~~~~~~~ 10 (135)
|||.|||-
T Consensus 2 kfytiklp 9 (26)
T PRK14741 2 KFYTIKLP 9 (26)
T ss_pred ceEEEecc
Confidence 78999873
No 133
>TIGR01034 metK S-adenosylmethionine synthetase. Tandem isozymes of this S-adenosylmethionine synthetase in E. coli are designated MetK and MetX.
Probab=33.80 E-value=79 Score=28.64 Aligned_cols=59 Identities=27% Similarity=0.389 Sum_probs=39.7
Q ss_pred CCCCCceeEEeCCHHHHHHHHhh-----------cc-ceeEeecccccccCCccccCceEEEeecCCcccccccccccce
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRK-----------VD-SACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLL 103 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~-----------VD-SA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Lt 103 (135)
+++.|.+.| +.+..++++.+ +| ..-.++|-|-||.-| ||+|=.+||
T Consensus 182 vS~QH~~~v---~~~~l~~~i~~~vi~~v~~~~~~~~~t~~~INPtGrFviG-------------------GP~gDtGLT 239 (377)
T TIGR01034 182 LSTQHDPDI---SQKDLREAIIEEIIKPVLPAEYLDEKTKFFINPTGRFVIG-------------------GPMGDTGLT 239 (377)
T ss_pred EecCCCCCC---CHHHHHHHHHHHHhHHhcCcccCCCCcEEEECCCCCeEeC-------------------CCccccccc
Confidence 566777765 34444444422 22 346888888777665 788889999
Q ss_pred EEEEEEeCCceee
Q psy11680 104 TTKWVLNGDGHVA 116 (135)
Q Consensus 104 t~Kyvv~G~Gq~r 116 (135)
-+|-+|..=|-..
T Consensus 240 GRKIiVDTYGG~~ 252 (377)
T TIGR01034 240 GRKIIVDTYGGWA 252 (377)
T ss_pred cceEEEeccCccc
Confidence 9999998765443
No 134
>PF08183 SpoV: Stage V sporulation protein family; InterPro: IPR012609 This family consists of the stage V sporulation (SpoV) proteins of Bacillus subtilis which includes SpoVM. SpoVM is an small, 26 residue-long protein that is produced in the mother cell chamber of the sporangium during the process of sporulation in B. subtilis. SpoVM forms an amphipathic alpha-helix and is recruited to the polar septum shortly after the sporangium undergoes asymmetric division. The function of SpoVM depends on proper subcellular localisation [].
Probab=32.97 E-value=21 Score=21.26 Aligned_cols=7 Identities=86% Similarity=1.459 Sum_probs=5.9
Q ss_pred ceeeEee
Q psy11680 3 KFYSIKL 9 (135)
Q Consensus 3 ~~~~~~~ 9 (135)
|||.|||
T Consensus 2 KfYtIKL 8 (26)
T PF08183_consen 2 KFYTIKL 8 (26)
T ss_pred Cceeeec
Confidence 7888887
No 135
>PRK05250 S-adenosylmethionine synthetase; Validated
Probab=29.20 E-value=97 Score=28.13 Aligned_cols=60 Identities=23% Similarity=0.299 Sum_probs=40.0
Q ss_pred CCCCCceeEEeCCHHHHHHHH-----------hhcc-ceeEeecccccccCCccccCceEEEeecCCcccccccccccce
Q psy11680 36 MNTLMTRKYFLFSESTAADFQ-----------RKVD-SACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLL 103 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~-----------~~VD-SA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Lt 103 (135)
+++.|.+.|- .+..++.+ ..+| -.-.++|-|-||.-| ||+|=.+||
T Consensus 185 iS~QH~~~~~---~~~l~~~i~e~vi~~v~~~~~~~~~t~~~INPtG~FviG-------------------GP~gDtGLT 242 (384)
T PRK05250 185 VSTQHDPDVS---QEQLREDVIEEVIKPVLPAELLDEDTKFLINPTGRFVIG-------------------GPQGDAGLT 242 (384)
T ss_pred EeccCCCCCC---HHHHHHHHHHHHhHHhcccccCCCCeEEEECCCCCeEeC-------------------CCccccccc
Confidence 5677877653 33333333 1233 356888888887665 889999999
Q ss_pred EEEEEEeCCceeec
Q psy11680 104 TTKWVLNGDGHVAS 117 (135)
Q Consensus 104 t~Kyvv~G~Gq~r~ 117 (135)
-+|-+|..=|-..+
T Consensus 243 GRKIiVDTYGG~a~ 256 (384)
T PRK05250 243 GRKIIVDTYGGYAR 256 (384)
T ss_pred CceEEEEcCCcccc
Confidence 99999987664443
No 136
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=28.80 E-value=75 Score=25.68 Aligned_cols=47 Identities=13% Similarity=0.017 Sum_probs=34.8
Q ss_pred eEEeCCHHHHHHHHhhccceeEeecccccccCC-cccc-----CceEEEeecC
Q psy11680 43 KYFLFSESTAADFQRKVDSACVFHNASSRFADG-YRFG-----LGAEVGISTA 89 (135)
Q Consensus 43 ~IVTed~~~a~~F~~~VDSA~V~vNASTRFsDG-~~fG-----lGaEvGIST~ 89 (135)
-+.|+|.+..+++.+......++||...+=..+ +.|+ -+.-|+|||+
T Consensus 77 iaAt~d~~ln~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~ 129 (210)
T COG1648 77 IAATDDEELNERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTG 129 (210)
T ss_pred EEeCCCHHHHHHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEEEECC
Confidence 355888999999999999999999998765432 1122 2467888885
No 137
>PLN02243 S-adenosylmethionine synthase
Probab=28.53 E-value=97 Score=28.19 Aligned_cols=60 Identities=27% Similarity=0.363 Sum_probs=39.6
Q ss_pred CCCCCceeEEeCCHHHHHHHHhh-c----------c-ceeEeecccccccCCccccCceEEEeecCCcccccccccccce
Q psy11680 36 MNTLMTRKYFLFSESTAADFQRK-V----------D-SACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLL 103 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~~-V----------D-SA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Lt 103 (135)
+++.|.+.| +.+..++++.+ | | ..-.++|-|-||--| ||+|=.+||
T Consensus 193 vS~QH~~~v---~~~~l~~~i~e~vi~~v~~~~~~~~~t~~~INPtGrFviG-------------------GP~~D~GLT 250 (386)
T PLN02243 193 ISTQHDETV---TNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIG-------------------GPHGDAGLT 250 (386)
T ss_pred EeeccCCCC---CHHHHHHHHHHHHhHHhcCcccCCCCcEEEECCCCCeEeC-------------------CCccccccc
Confidence 567787766 33444444422 2 2 236777777776554 899999999
Q ss_pred EEEEEEeCCceeec
Q psy11680 104 TTKWVLNGDGHVAS 117 (135)
Q Consensus 104 t~Kyvv~G~Gq~r~ 117 (135)
-+|-+|..=|-..+
T Consensus 251 GRKIiVDTYGG~~~ 264 (386)
T PLN02243 251 GRKIIIDTYGGWGA 264 (386)
T ss_pred CceEEEEcCCCccC
Confidence 99999987664443
No 138
>PF12419 DUF3670: SNF2 Helicase protein ; InterPro: IPR022138 This domain family is found in bacteria, archaea and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF00271 from PFAM, PF00176 from PFAM. Most of the proteins in this family are annotated as SNF2 helicases but there is little accompanying literature to confirm this.
Probab=26.99 E-value=1e+02 Score=23.11 Aligned_cols=68 Identities=21% Similarity=0.252 Sum_probs=51.1
Q ss_pred CHHHHHHHHhh----ccceeEeecccccccCCccccCceEEEeecCCcccccccccccceEEEEEEe-CCcee
Q psy11680 48 SESTAADFQRK----VDSACVFHNASSRFADGYRFGLGAEVGISTARIHARGPVGVEGLLTTKWVLN-GDGHV 115 (135)
Q Consensus 48 d~~~a~~F~~~----VDSA~V~vNASTRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Ltt~Kyvv~-G~Gq~ 115 (135)
+.++|..|+.+ +..+.|=|=-+....+..+--+++.+-+........+-+|+++|..+.|-+. |+-.+
T Consensus 12 ~~~ea~~FL~~~~~~L~~~Gi~V~lP~~w~~~~~~~l~l~~~~~~~~~~~~~~lgl~~l~~f~W~lalGd~~L 84 (141)
T PF12419_consen 12 TTEEAYDFLTEAAPRLRAAGIGVLLPSWWKKVRRPRLRLRAKATSPGGSSQSFLGLDQLLDFDWELALGDEEL 84 (141)
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEcCHHHhhccCCCcEEEEEeccCCCCCCCccChHHHhcceEEEEECCEEC
Confidence 56778888766 5677777777777777766667777777555667889999999999999765 44433
No 139
>KOG2453|consensus
Probab=25.57 E-value=41 Score=31.10 Aligned_cols=35 Identities=11% Similarity=0.086 Sum_probs=29.7
Q ss_pred CCCCCceeEEeCCHHHHHHHHh--hccceeEeecccc
Q psy11680 36 MNTLMTRKYFLFSESTAADFQR--KVDSACVFHNASS 70 (135)
Q Consensus 36 ~~s~HTd~IVTed~~~a~~F~~--~VDSA~V~vNAST 70 (135)
..-+.+.+|.|.|.++..+++- +-|...|-||-+|
T Consensus 419 v~qglsssift~n~~nifrw~gpkgsdcgivnvnipt 455 (507)
T KOG2453|consen 419 VDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPT 455 (507)
T ss_pred cccccchhhhhcCHHHHHhhhCCCCCccceEEecCCC
Confidence 3457889999999999999984 6678889999888
No 140
>KOG3858|consensus
Probab=25.05 E-value=83 Score=26.65 Aligned_cols=47 Identities=26% Similarity=0.220 Sum_probs=32.7
Q ss_pred cceeEeeccc-ccccCCccccCceEEEeecCCcccccccccccce--EEEEEEe
Q psy11680 60 DSACVFHNAS-SRFADGYRFGLGAEVGISTARIHARGPVGVEGLL--TTKWVLN 110 (135)
Q Consensus 60 DSA~V~vNAS-TRFsDG~~fGlGaEvGIST~KlHaRGPvGLe~Lt--t~Kyvv~ 110 (135)
+--.||||.| +||-.|. .-.++.|. ++++-+-|--=+.-- +.+|+|.
T Consensus 25 ~~~~VyWNSSNp~F~~~d---~vI~v~ig-D~ldIiCP~~e~~~~~~~E~yilY 74 (233)
T KOG3858|consen 25 NLHPVYWNSSNPRFRRGD---YVIYVQIG-DYLDIICPHYEEGGPEGYEYYILY 74 (233)
T ss_pred cccceEecCCCcceecCC---ceEEeccC-CEEEEECCCCCCCCCCcceEEEEE
Confidence 4567999998 6888854 66777776 799888877544444 5555543
No 141
>PHA02642 C-type lectin-like protein; Provisional
Probab=23.21 E-value=28 Score=28.87 Aligned_cols=84 Identities=17% Similarity=0.209 Sum_probs=46.5
Q ss_pred eEeeEEEEeeeeeE-----------EEEEee---cccCCCCCCCCCCCCce-eE----EeCCHHHHHHHHhhccceeEee
Q psy11680 6 SIKLYCCITLWSFT-----------FMVVLD---SQYRPSNCPFMNTLMTR-KY----FLFSESTAADFQRKVDSACVFH 66 (135)
Q Consensus 6 ~~~~~~~~~~~~~~-----------~~~~~~---~~~~~~~~~~~~s~HTd-~I----VTed~~~a~~F~~~VDSA~V~v 66 (135)
..|||||..+-.+. +.+.-+ ++-|...|+.==..|-+ |. ...+...|+++.+...+..+.+
T Consensus 47 ~~~~~~c~~~i~~l~~~~~~~l~~~~~~~~~~~~~~~k~~~CP~gW~~~~~kCYyfs~~~ksW~eA~~~C~s~ga~La~I 126 (216)
T PHA02642 47 PEKLYCCIITICILITINLVPIIILMAFKSDTQEPTIKYVTCPKGWIGFGYKCFYFSEDSKNWTFGNTFCTSLGATLVKV 126 (216)
T ss_pred ccceeeeeehHHHHHHHHHHHHHHHHHhcccccCCCcccCCCCCcCEEECCEEEEEeCcccCHHHHHHHHhhCCCeEeeE
Confidence 36999998754421 111112 23355677653222221 11 2677899999999999888887
Q ss_pred cccc--cccCCccccCceEEEeecC
Q psy11680 67 NASS--RFADGYRFGLGAEVGISTA 89 (135)
Q Consensus 67 NAST--RFsDG~~fGlGaEvGIST~ 89 (135)
+... .|-....-....=||++-.
T Consensus 127 ~seeE~~FL~~~~~~~~yWIGLsd~ 151 (216)
T PHA02642 127 ETEEELNFLKRYKDSSDHWIGLNRE 151 (216)
T ss_pred CCHHHHHHHHHhhcCCeEEEEeEeC
Confidence 7643 2222111123456777543
No 142
>cd08696 C2_Dock-C C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-C is one of 4 classes of Dock family proteins. The members here include: Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3. Dock-C members are GEFs for both Rac and Cdc42. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-C members contain a functionally uncharacterized domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strand
Probab=22.22 E-value=39 Score=27.02 Aligned_cols=31 Identities=29% Similarity=0.506 Sum_probs=25.6
Q ss_pred HHHhhccceeEeecccccccCCccccCceEE
Q psy11680 54 DFQRKVDSACVFHNASSRFADGYRFGLGAEV 84 (135)
Q Consensus 54 ~F~~~VDSA~V~vNASTRFsDG~~fGlGaEv 84 (135)
.|..+.-|+..|+|-+++|.|=..--+=+++
T Consensus 51 ~~~~~~~S~V~yHnk~P~f~DEiKi~LP~~l 81 (179)
T cd08696 51 EFLTEAYTAVTYHNKSPDFYDEIKIKLPADL 81 (179)
T ss_pred ccceeEEEEEEEeCCCCcccceEEEEcCCCC
Confidence 7999999999999999999987665554443
No 143
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=22.07 E-value=1e+02 Score=25.34 Aligned_cols=61 Identities=10% Similarity=0.031 Sum_probs=36.0
Q ss_pred ecccCCCCCCCCCCCCceeEE-eCCHHHHHHHHhhccceeEeecccccccCC-cccc-----CceEEEeecC
Q psy11680 25 DSQYRPSNCPFMNTLMTRKYF-LFSESTAADFQRKVDSACVFHNASSRFADG-YRFG-----LGAEVGISTA 89 (135)
Q Consensus 25 ~~~~~~~~~~~~~s~HTd~IV-Ted~~~a~~F~~~VDSA~V~vNASTRFsDG-~~fG-----lGaEvGIST~ 89 (135)
...|.|+..+ +.-=.|+ |+|++.-++-.+......+++|....-..+ +-++ .+.-|+|||+
T Consensus 75 ~r~~~~~dl~----g~~LViaATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~ 142 (223)
T PRK05562 75 KGNYDKEFIK----DKHLIVIATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTK 142 (223)
T ss_pred eCCCChHHhC----CCcEEEECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECC
Confidence 3445555442 2333444 467777788888888888888876542211 1111 2578899985
No 144
>PRK11625 Rho-binding antiterminator; Provisional
Probab=20.43 E-value=41 Score=24.22 Aligned_cols=12 Identities=33% Similarity=0.769 Sum_probs=10.1
Q ss_pred ecccCCCCCCCC
Q psy11680 25 DSQYRPSNCPFM 36 (135)
Q Consensus 25 ~~~~~~~~~~~~ 36 (135)
+++|+|-||+.+
T Consensus 2 ~~~YqpI~Cd~y 13 (84)
T PRK11625 2 NDTYQPINCDDY 13 (84)
T ss_pred CCCcccccccch
Confidence 678999999865
Done!