RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11681
(181 letters)
>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Length = 494
Score = 123 bits (309), Expect = 4e-34
Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 6/186 (3%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT-E 59
P I S +++ AV + + N GQ A + + + ++ A S
Sbjct: 268 PNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 327
Query: 60 QVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD-RFISPTILVDVKPTD 114
V + F+++ +++ + GG + A FI PT+ DV+
Sbjct: 328 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGM 387
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCI 174
I EEIFGP++ I+ ++ E + N L +F+ + +G++ +
Sbjct: 388 TIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWV 447
Query: 175 NDTVMH 180
N +
Sbjct: 448 NCYDVF 453
>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Baltic cod (Gadus callarias) [TaxId: 8053]}
Length = 503
Score = 121 bits (304), Expect = 3e-33
Identities = 36/192 (18%), Positives = 70/192 (36%), Gaps = 12/192 (6%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT-E 59
PL I +E AVR L + GQ C + R++ Q L + + +
Sbjct: 269 PLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGD 328
Query: 60 QVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR-------FISPTILV 108
+ ++S ++ V + + GG+ F+SP +L
Sbjct: 329 PLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLD 388
Query: 109 DVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTH 168
+ + + EEIFGP++ ++ ++ E +Q N L +F+ +
Sbjct: 389 NCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLE 448
Query: 169 SGSMCINDTVMH 180
+G+ IN +
Sbjct: 449 AGTCYINTYSIS 460
>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase
{Thermus thermophilus [TaxId: 274]}
Length = 516
Score = 118 bits (296), Expect = 3e-32
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Query: 3 YIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ 62
+D + + +LA + GQ C A ++ ++ +L + + +
Sbjct: 296 IVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAE 355
Query: 63 GSKHYCRIVSDKHFQRLKSLVH---SSGTIALGGD-MDASDRFISPTILVDVKPTDPIMG 118
+ +VS + +++ S + + G + LGG ++ FI+PT+ +V P I
Sbjct: 356 ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQ 415
Query: 119 EEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTV 178
EEIFGP+L +I V+ EA++ N P LT ++S + E + H G++ N +
Sbjct: 416 EEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKI 475
Query: 179 MHY 181
Sbjct: 476 TGA 478
>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Sheep (Ovis aries) [TaxId: 9940]}
Length = 494
Score = 118 bits (296), Expect = 3e-32
Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSW-YTE 59
P + + +++ AV G + GQ CIA + + + + ++ +
Sbjct: 268 PCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN 327
Query: 60 QVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD-RFISPTILVDVKPTD 114
+ + + ++++ L+ S + GG + FI PT+ DV
Sbjct: 328 PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDM 387
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCI 174
I EEIFGP+ I+ +S + I+ N L+ +F+++ SG++ +
Sbjct: 388 RIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWV 447
Query: 175 NDTVMH 180
N +
Sbjct: 448 NCYSVV 453
>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 446
Score = 109 bits (273), Expect = 3e-29
Identities = 89/181 (49%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D ++++A RR WGK +N+GQTC+APDYILC +Q QI+ + K L +Y E
Sbjct: 214 PCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGED 273
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S+ Y RI++D+HFQR+K + + +A GG D S R+I+PTILVDV P P+M EE
Sbjct: 274 AKQSRDYGRIINDRHFQRVKG-LIDNQKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEE 332
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP++PI+ V S EAIQFIN R KPL LY+FS+N +V + I +T SG + ND ++H
Sbjct: 333 IFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVH 392
Query: 181 Y 181
Sbjct: 393 I 393
>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Streptococcus mutans [TaxId: 1309]}
Length = 474
Score = 103 bits (257), Expect = 8e-27
Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 2/182 (1%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
+ ++EL + + G +GQ C A +L V +++ + + + +
Sbjct: 255 SAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 314
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGT--IALGGDMDASDRFISPTILVDVKPTDPIMG 118
+ ++ K ++ L++ + ++ I P + V +
Sbjct: 315 PEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAW 374
Query: 119 EEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTV 178
EE FGP+LPII V S EAI+ N L +F+++ Q G++ IN+
Sbjct: 375 EEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKT 434
Query: 179 MH 180
Sbjct: 435 QR 436
>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW
{Escherichia coli [TaxId: 562]}
Length = 474
Score = 87.6 bits (216), Expect = 3e-21
Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 7/187 (3%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-----AKAVLDS 55
P+ + +IE V NAGQ C A I + + ++ + A +
Sbjct: 252 PVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGA 311
Query: 56 WYTEQVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDM--DASDRFISPTILVDVKPT 113
E + ++ + ++ + + G + + +PT+L
Sbjct: 312 PDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQD 371
Query: 114 DPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMC 173
D I+ +E+FGP++ + ++ + + + N L +++ + + G
Sbjct: 372 DAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTW 431
Query: 174 INDTVMH 180
+N M
Sbjct: 432 VNTHFML 438
>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating
glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon
Thermoproteus tenax [TaxId: 2271]}
Length = 499
Score = 87.7 bits (216), Expect = 3e-21
Identities = 38/189 (20%), Positives = 72/189 (38%), Gaps = 11/189 (5%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT-E 59
P + +++LA + G AGQ C A +L R V +++ + L S +
Sbjct: 267 PAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGD 326
Query: 60 QVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTIL--------VDVK 111
+ ++S + + + + + GG + A R + PT + D
Sbjct: 327 PRDPTVDVGPLISPSAVDEMMAAIEDA--VEKGGRVLAGGRRLGPTYVQPTLVEAPADRV 384
Query: 112 PTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGS 171
+ E+F P+ + V+ +AI+ N RP L +F + + G+
Sbjct: 385 KDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGA 444
Query: 172 MCINDTVMH 180
+ IND H
Sbjct: 445 IYINDMPRH 453
>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase
{Thermotoga maritima [TaxId: 2336]}
Length = 414
Score = 57.0 bits (136), Expect = 1e-10
Identities = 19/164 (11%), Positives = 45/164 (27%), Gaps = 6/164 (3%)
Query: 23 INAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLKSL 82
+ + A +L + I A L + + +
Sbjct: 206 LISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEK 265
Query: 83 VHSSGTIALG------GDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFE 136
+ + G + V T+ E I+ I V++ E
Sbjct: 266 IAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPTEYLDLIIAIKVVKNVDE 325
Query: 137 AIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
AI+ I + + + N + F+ + + ++ +N +
Sbjct: 326 AIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRF 369
>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Vibrio harveyi [TaxId: 669]}
Length = 504
Score = 53.6 bits (127), Expect = 2e-09
Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 7/165 (4%)
Query: 16 RFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKH 75
+F+ + GQ C P + + Q + L + + +
Sbjct: 272 QFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQV 331
Query: 76 FQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAF 135
R + + P EEIFGP I+ E+
Sbjct: 332 VSRGS---DDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVA 388
Query: 136 EAIQFINARPKPLTLYLFSSNAQVQELF----IHQTHSGSMCIND 176
+ + LT + ++ ++ + +G + N
Sbjct: 389 DMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNG 433
>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 436
Score = 34.0 bits (77), Expect = 0.006
Identities = 22/157 (14%), Positives = 38/157 (24%), Gaps = 10/157 (6%)
Query: 19 WGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQR 78
I A + + + + L W + + I + K +
Sbjct: 238 DADLIKAKRISLDAKTNYPAGCNAMETLLINPKFSKWWEVLENLTLEGGVTIHATKDLK- 296
Query: 79 LKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAI 138
T + + + +E L V S AI
Sbjct: 297 ---------TAYFDKLNELGKLTEAIQCKTVDADEEQDFDKEFLSLDLAAKFVTSTESAI 347
Query: 139 QFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
Q IN T + + N E F+ S + N
Sbjct: 348 QHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWN 384
>d1mjta_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase
domain {Staphylococcus aureus [TaxId: 1280]}
Length = 346
Score = 26.2 bits (58), Expect = 2.5
Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 11/48 (22%)
Query: 44 QILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLKSL---VHSSGT 88
+ +A+A +++ Y E C + +RL + + +GT
Sbjct: 1 HLFKEAQAFIENMYKE--------CHYETQIINKRLHDIELEIKETGT 40
>d1vl4a_ d.283.1.1 (A:) PmbA-related protein TM0727 {Thermotoga
maritima [TaxId: 2336]}
Length = 433
Score = 24.5 bits (52), Expect = 8.6
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 89 IALGGDMDASDRFISPTILVD 109
+ +G D+ S I+P++LV+
Sbjct: 408 VLVGNDVKVSQHTIAPSVLVE 428
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.137 0.414
Gapped
Lambda K H
0.267 0.0539 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 654,073
Number of extensions: 27489
Number of successful extensions: 72
Number of sequences better than 10.0: 1
Number of HSP's gapped: 69
Number of HSP's successfully gapped: 16
Length of query: 181
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 101
Effective length of database: 1,309,196
Effective search space: 132228796
Effective search space used: 132228796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.5 bits)