BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11686
(939 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328779971|ref|XP_395316.3| PREDICTED: probable sulfite oxidase, mitochondrial-like [Apis
mellifera]
Length = 552
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/472 (37%), Positives = 252/472 (53%), Gaps = 81/472 (17%)
Query: 5 VKALSK--LRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI- 61
+ AL+K + GE L Y+L ++ H + ++ IWV F+QGVYDIT+F++ HPGG
Sbjct: 70 IYALNKKFISCGEFRVDLKTYNLEEVGKHDNKENRIWVTFKQGVYDITDFIEKHPGGSSK 129
Query: 62 IMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRS 121
I+ AAG SIEPFWA++ H E++ELLES RIGNIS+ED+ + +DPY EP+R
Sbjct: 130 ILMAAGSSIEPFWAIFANHNTQEIYELLESMRIGNISKEDAIFNIIN-DNDPYSKEPIRH 188
Query: 122 PLLKATSLKPYNAEPPPSMLVENFLTPSLL---------SQVGSSTITLDQAI--VSKQL 170
+LK KP+ AEPP S+L+E+F+TP L ++ T TL+ AI V+K++
Sbjct: 189 KVLKINGEKPFCAEPPSSLLIESFITPMELFYVRNHLPVPEIDLKTYTLELAIEEVTKKI 248
Query: 171 SSF----KHSDEKLKLVKVMAGNISQE--------------------------------D 194
F K+ + + AGN E D
Sbjct: 249 LKFEDIKKYPKYTITSAIMCAGNRRSEMTKEKQLKGLNWGVGAVGNATWTGTRLCDILKD 308
Query: 195 SKLAAKD---IASDPYVMEPVRSPL-----------LKATSLKPY--NAEPPPS------ 232
K+ D I + Y ++P +P +A + Y N +P P
Sbjct: 309 LKIKEDDYNHIQFEGYDLDPSGTPYGASIPISKAMDSRADIILAYEMNEQPIPRDHGFPI 368
Query: 233 -MLYSSLLRIPFCSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPV 291
++ ++ K+I+S ES S WQQNDYK FSP+TDWD VDF+K+PAIQE+PV
Sbjct: 369 RVIVPGVVGARNVKWLAKIIVSKKESQSQWQQNDYKVFSPNTDWDNVDFSKAPAIQEMPV 428
Query: 292 ISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAP 351
ISAIC P +K+ N ++ V+GYAWSGGG+ I+RVDVT DQG TW+ AN +D+ A
Sbjct: 429 ISAICKPEQSEIIKVINGKINVKGYAWSGGGRKIIRVDVTNDQGETWYTANLDAEDNNAK 488
Query: 352 LTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ R+W WTLW +PV + KE+ I +D + N P+ +K ++
Sbjct: 489 VGRYWSWTLWSIDLPVKKELKEMEIW-------TKAVDASYNVQPENIKNIW 533
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 35/40 (87%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW+KAVD+SYN QPE+ NIWNLRG L NAYH+++V++
Sbjct: 511 MEIWTKAVDASYNVQPENIKNIWNLRGFLCNAYHKIKVKL 550
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 394 ATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTG 453
A + K + E ++ + + +CA E + K +KGL WG AVGNATWTG
Sbjct: 240 AIEEVTKKILKFEDIKKYPKYTITSAIMCAGNRRSEMTKEKQLKGLNWGVGAVGNATWTG 299
Query: 454 ARLVDVLKAAGISPDQSLDSADVQHVHVE 482
RL D+LK I D D H+ E
Sbjct: 300 TRLCDILKDLKIKED------DYNHIQFE 322
>gi|391332152|ref|XP_003740501.1| PREDICTED: probable sulfite oxidase, mitochondrial-like
[Metaseiulus occidentalis]
Length = 553
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 240/455 (52%), Gaps = 84/455 (18%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQ 82
Y +++ H + IWV +RQGVYDIT+FV+ HPGGE I+ AGGSIEPFW +YGVH +
Sbjct: 90 YDATEVSKHDTKEKRIWVTYRQGVYDITDFVEKHPGGENILLGAGGSIEPFWQIYGVHKK 149
Query: 83 DEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLV 142
E+ ++LE YRIGN++ DS A K+ DPY +PVR P LK SLKP+NAEPP +L
Sbjct: 150 PEILDMLEEYRIGNLA--DSGDALKN-TEDPYANDPVRHPALKPASLKPFNAEPPLKILA 206
Query: 143 ENFLTPSLLSQV------------------------GSSTITLDQ---------AIVSKQ 169
E FLTP+ L V G+ T+TL+ + Q
Sbjct: 207 ERFLTPNSLFYVRHHLPVPDPSPAEYALEVEGIGIEGTKTLTLEDLKTKFPKVTITAALQ 266
Query: 170 LSSFKHSDE-KLKLVKVM------AGNISQEDSKLA-----AKDIASDPYVMEPVRSPLL 217
+ + S++ K+K VK + GN + ++L + +DP + + L
Sbjct: 267 CAGNRRSEQNKIKKVKGLDWGAAAIGNATWSGARLTDVLAYLRVDCNDPRIQHVIFDGLD 326
Query: 218 KATSLKPYNAEP-----------------------------PPSMLYSSLLRIPFCSHTG 248
+ KPY A P + ++ G
Sbjct: 327 LDPTGKPYGASVTARRALNPGNDVILAYEMNGETLPRDHGYPVRAIVPGVVGARNVKWLG 386
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+++LS+ ES SHWQQNDYKGF PS DWDTVDF K+PAI+ELPV+S+IC P +++ + +
Sbjct: 387 RIVLSEIESDSHWQQNDYKGFCPSVDWDTVDFKKAPAIEELPVVSSICDPADGSEVPIVD 446
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ ++GYAWSGGG+ IVRVDV+ D G+TW A Q+ R W WT+W+A +PV
Sbjct: 447 GKVFLRGYAWSGGGRKIVRVDVSADGGKTWCEAELVEQEKNTHHFRTWSWTIWQARVPVK 506
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P KEV ++ +D + N+ PD ++ ++
Sbjct: 507 PGQKEVELVSKA-------VDASYNSQPDTVEPLW 534
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 34/40 (85%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
VE+ SKAVD+SYN+QP++ +WNLRGVL+N++ RV+V +
Sbjct: 512 VELVSKAVDASYNSQPDTVEPLWNLRGVLNNSWSRVKVTL 551
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVL 460
CA E ++K VKGL WG AA+GNATW+GARL DVL
Sbjct: 267 CAGNRRSEQNKIKKVKGLDWGAAAIGNATWSGARLTDVL 305
>gi|322790654|gb|EFZ15438.1| hypothetical protein SINV_10299 [Solenopsis invicta]
Length = 557
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 238/472 (50%), Gaps = 82/472 (17%)
Query: 4 GVKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EI 61
+ A + G+ + Y+L ++ H ++ IWV FRQGVYDITEFV HPGG +I
Sbjct: 77 ALSATPNVECGQLRKDMKTYTLEEVGRHDRKENRIWVTFRQGVYDITEFVDKHPGGPSKI 136
Query: 62 IMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRS 121
+M AAGGSIEPFW ++ H E+ LLES RIGNIS+ED++ D+ DPY EP R
Sbjct: 137 VM-AAGGSIEPFWTIFANHNTPEIHSLLESMRIGNISEEDAESNKSDLF-DPYANEPTRH 194
Query: 122 PLLKATSLKPYNAEPPPSML------------VENFL-TPSL--------LSQVGSSTIT 160
L KP+ AEP P +L V N L P + L+ G++ T
Sbjct: 195 KALMINGSKPFCAEPSPPLLVESFLTPVDFFYVRNHLPVPQIDINDYTLELAVEGTTKKT 254
Query: 161 LD---------QAIVSKQLSSFKHSDE--KLKLVKVM------AGNISQEDSKLA--AKD 201
LD Q I + + E K+K +K + GN S ++L KD
Sbjct: 255 LDFKAITKYERQTITAAVMCGGNRRSEMSKVKQLKGINWNVGAVGNASWTGARLCDVLKD 314
Query: 202 IASDP----------YVMEPVRSPLLKATSLKP-------------YNAEP-------PP 231
+ + Y ++P +P + + N +P P
Sbjct: 315 LGINEEKFDHVQFEGYDLDPSGTPYAASIPISKAMDPRSDVILAYEMNGQPLSKDHGFPV 374
Query: 232 SMLYSSLLRIPFCSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPV 291
++ ++ K+ +S ES S WQQ DYKGFSPST+WD VDF+KSPAIQE+PV
Sbjct: 375 RVIVPGVVGARNVKWLSKISVSKEESQSQWQQGDYKGFSPSTNWDNVDFSKSPAIQEMPV 434
Query: 292 ISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAP 351
ISAIC P ++++N +++V+GYAWSGGG+ I+R+D+T D+G+TWH A+ +D +A
Sbjct: 435 ISAICEPQNSDVVEVKNGKIQVKGYAWSGGGRKIIRIDITNDKGKTWHTADLI-EDLKAK 493
Query: 352 LTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
R+W WTLW +PVD EV I +D A N P+ ++
Sbjct: 494 QGRYWSWTLWNVELPVDKNVNEVQIW-------AKAVDSAYNVQPENFSHIY 538
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 169/401 (42%), Gaps = 82/401 (20%)
Query: 188 GNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLLRIPFCSHT 247
GNIS+ED++ D+ DPY EP R L KP+ AEP P +L S F +
Sbjct: 169 GNISEEDAESNKSDLF-DPYANEPTRHKALMINGSKPFCAEPSPPLLVES-----FLTPV 222
Query: 248 GKVILSDHESTSHWQQNDY--KGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAK-- 303
+ +H NDY + T T+DF K+ E I+A + + +
Sbjct: 223 DFFYVRNHLPVPQIDINDYTLELAVEGTTKKTLDF-KAITKYERQTITAAVMCGGNRRSE 281
Query: 304 ------LKLENHQMEVQGYA-WSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHW 356
LK N + G A W+G V D+ I++ + HV F G D
Sbjct: 282 MSKVKQLKGINWNVGAVGNASWTGARLCDVLKDLGINEEKFDHV-QFEGYDLDP------ 334
Query: 357 GWTLWRATIPV----DPKTKEVSIMDMLMGKKPHDIDFATNATPDQM----------KAM 402
T + A+IP+ DP++ + +M D F + K
Sbjct: 335 SGTPYAASIPISKAMDPRSDVILAYEMNGQPLSKDHGFPVRVIVPGVVGARNVKWLSKIS 394
Query: 403 FAEEKVRTFNEKGEKHGTVCARMNDKENFEVKP--------------------------- 435
++E+ ++ ++G+ G + D +F P
Sbjct: 395 VSKEESQSQWQQGDYKGFSPSTNWDNVDFSKSPAIQEMPVISAICEPQNSDVVEVKNGKI 454
Query: 436 -VKGLTWGHAA-------VGN---ATWTGARLVDVLKA-AGISPDQSLDSADV---QHVH 480
VKG W + N TW A L++ LKA G +L + ++ ++V+
Sbjct: 455 QVKGYAWSGGGRKIIRIDITNDKGKTWHTADLIEDLKAKQGRYWSWTLWNVELPVDKNVN 514
Query: 481 -VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
V+IW+KAVDS+YN QPE+F++I+N+RG+L NAYH+++V++
Sbjct: 515 EVQIWAKAVDSAYNVQPENFSHIYNIRGLLCNAYHKIKVQL 555
>gi|332024429|gb|EGI64627.1| Putative sulfite oxidase, mitochondrial [Acromyrmex echinatior]
Length = 555
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 225/444 (50%), Gaps = 79/444 (17%)
Query: 7 ALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKA 65
A ++ G+ + Y+L +++NH K IWV F QGVYDIT+FV HPGG IM A
Sbjct: 78 ATQNVKCGQFRKDMKTYTLEEVRNHDSEKKGIWVTFGQGVYDITKFVDKHPGGPSKIMMA 137
Query: 66 AGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLK 125
AGGSI+PFW ++ H E+ LLES RIGNIS+ED+K D+ DPY +PVR LK
Sbjct: 138 AGGSIDPFWMIFANHNTPEIHSLLESMRIGNISEEDAKFNKSDLY-DPYANDPVRHKALK 196
Query: 126 ATSLKPYNAEP-PPSML-----------VENFL-TPSL--------LSQVGSSTITLDQA 164
KP+ AEP PP ++ V N L P + L+ G++ TLD
Sbjct: 197 VKRNKPFCAEPSPPLLVESFFTPVPFFYVRNHLPVPEIELKDYTLELAIEGTTKKTLDFK 256
Query: 165 IVSK------------------QLSSFKHSD--------------EKLKLVKVMAGNISQ 192
+ K ++S KH + ++L V+
Sbjct: 257 ALQKYEKRTVTATMMCGGNRRSEMSKVKHLEGVQWDVGAVGNATWTGVRLCDVLKDLGVN 316
Query: 193 EDSKLAAKDIASDPYVMEPVRSPL-----------LKATSLKPY--NAEP-------PPS 232
ED A + D + ++P P KA + Y N EP P
Sbjct: 317 ED---AFNHVQFDGHDLDPSGMPYGGSIPISKAMDPKADVILAYEMNGEPLTQDHGFPVR 373
Query: 233 MLYSSLLRIPFCSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVI 292
+ +L K+ +S ES S WQQ DYKG PST WD VDF KSPAIQE+PV+
Sbjct: 374 VFVPGVLGARSVKWLSKINVSKEESQSQWQQGDYKGLPPSTTWDNVDFNKSPAIQEMPVM 433
Query: 293 SAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL 352
SAIC P K++++N +++V+GYAWSGGG+ I RVDVT D G+TWH A+ +D Q
Sbjct: 434 SAICDPQDTDKVEIKNGKIKVKGYAWSGGGRKIFRVDVTNDNGKTWHTADLM-EDLQTNE 492
Query: 353 TRHWGWTLWRATIPVDPKTKEVSI 376
RHW WTLW +PVD K+KEV I
Sbjct: 493 GRHWSWTLWNVELPVDNKSKEVEI 516
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 39/47 (82%)
Query: 474 ADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
D + VEIW+KAVDSSYN QPESF +I+N+RG+L NAYH+++V++
Sbjct: 507 VDNKSKEVEIWAKAVDSSYNVQPESFNHIYNIRGLLCNAYHKIKVQL 553
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPD 468
+C E +VK ++G+ W AVGNATWTG RL DVLK G++ D
Sbjct: 271 MCGGNRRSEMSKVKHLEGVQWDVGAVGNATWTGVRLCDVLKDLGVNED 318
>gi|307213225|gb|EFN88720.1| Probable sulfite oxidase, mitochondrial [Harpegnathos saltator]
Length = 466
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 222/452 (49%), Gaps = 79/452 (17%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYGVHL 81
Y++ ++ H + + IW+ FRQGVYDITEF+ HPGG I+ AAGGSI+PFW+++ H
Sbjct: 4 YTMEEVGKHDNKEKRIWITFRQGVYDITEFIDKHPGGSSKILMAAGGSIDPFWSIFANHN 63
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKD----IASDP-------------YVMEPVRSPLL 124
E++ LLES RIGNIS+ED+K D A+DP + EP P+L
Sbjct: 64 TPEIYSLLESMRIGNISEEDAKSNKNDSHDAYANDPSRHKTLTINNQKPFCAEP-PPPIL 122
Query: 125 KATSLKP------YNAEPPPSMLVENFLTPSLLSQVGSSTITLDQ-------AIVSKQLS 171
+ L P N P P + ++++ + D AI + +
Sbjct: 123 VDSFLTPNELFYIRNHLPVPEIDLKDYTLELTIEGETKKVFDFDALKKYKKYAITAAVMC 182
Query: 172 SFKHSDEKLKLVKV--------MAGNISQEDSKL------------AAKDIASDPYVMEP 211
E K+ K+ GN +L A + + Y ++P
Sbjct: 183 GGNRRSEMAKVKKLRGLSWNVGAVGNAKWAGVRLCDILRDLGINENAFSHVQFEGYDLDP 242
Query: 212 VRSP----LLKATSLKP---------YNAEP-------PPSMLYSSLLRIPFCSHTGKVI 251
+P + A ++ P N +P P ++ ++ K+
Sbjct: 243 SGTPYGASIPIAKAMDPRADVILAYEMNGQPLSRDHGFPLRVIVPGVVGARNVKWVNKIT 302
Query: 252 LSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQM 311
+S ES S WQQ DYKGFSPST WD VDF+KSPAIQE+PVISAIC P ++++N ++
Sbjct: 303 VSKEESPSQWQQGDYKGFSPSTTWDNVDFSKSPAIQEMPVISAICSPQDADTVEVKNGKI 362
Query: 312 EVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVDPKT 371
EV+GYAWSGGG+ I+RVDVT +QG WH AN + QD QA R+W WTLW +PVD +
Sbjct: 363 EVKGYAWSGGGRKIIRVDVTNNQGANWHTANLSEQDFQAKEGRYWSWTLWNVELPVDKNS 422
Query: 372 KEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE I +D A N P+ ++
Sbjct: 423 KETEIW-------AKAVDSAYNVQPESFANIY 447
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 36/44 (81%)
Query: 475 DVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
D EIW+KAVDS+YN QPESFANI+NLRG+L NAYHR+++
Sbjct: 419 DKNSKETEIWAKAVDSAYNVQPESFANIYNLRGLLCNAYHRIKI 462
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 398 QMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLV 457
+ K +F + ++ + + +C E +VK ++GL+W AVGNA W G RL
Sbjct: 158 ETKKVFDFDALKKYKKYAITAAVMCGGNRRSEMAKVKKLRGLSWNVGAVGNAKWAGVRLC 217
Query: 458 DVLKAAGIS 466
D+L+ GI+
Sbjct: 218 DILRDLGIN 226
>gi|380024418|ref|XP_003695994.1| PREDICTED: probable sulfite oxidase, mitochondrial-like [Apis
florea]
Length = 552
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 239/471 (50%), Gaps = 79/471 (16%)
Query: 5 VKALSK--LRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI- 61
+ AL+K + GE L Y+L ++ H + ++ IWV F+QGVYDIT+F++ HPGG
Sbjct: 70 IYALNKKFIACGEFRVDLKTYNLEEVGKHDNKENRIWVTFKQGVYDITDFIEKHPGGSSK 129
Query: 62 IMKAAGGSIEPFWAMYGVHLQDEVFELLESYR---------IGNISQEDSKLAAKDI--- 109
I+ AAG SIEPFWA++ H E++ELLES R I N ++ + + I
Sbjct: 130 ILMAAGSSIEPFWAIFANHNTQEIYELLESMRIGNISKEDAIFNTINDNDPYSKEPIRHK 189
Query: 110 -----ASDPYVMEPVRSPLLKA--TSLKPY---NAEPPPSMLVENFLTPSLLSQVGSSTI 159
P+ EP S L+++ T ++ + N P P + ++ + ++ +V + +
Sbjct: 190 VLKINGEKPFCAEPPPSLLIESFITPMELFYVRNHLPVPEIDLKTYTLELVIEEVTNKIL 249
Query: 160 -----------TLDQAIVSKQLSSFKHSDEK-LKLVKVMAGNISQ------------EDS 195
T+ AI+ + S EK LK + G + +D
Sbjct: 250 KFEDIKKYPKYTITSAIMCAGNRRSEMSKEKQLKGLNWGIGAVGNATWTGTRLCDILKDL 309
Query: 196 KLAAKD---IASDPYVMEPVRSPL-----------LKATSLKPY--NAEPPPS------- 232
K+ D I + Y ++P +P +A + Y N +P P
Sbjct: 310 KIKEDDYNHIQFEGYDLDPSGTPYGASIPISKAMDSRADIILAYEMNEQPIPRDHGFPIR 369
Query: 233 MLYSSLLRIPFCSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVI 292
++ ++ K+I+S ES S WQQNDYK FSP+TDWD VDF+K+PAIQE+PVI
Sbjct: 370 VIVPGVVGARNVKWLAKIIVSKKESQSQWQQNDYKVFSPNTDWDNVDFSKAPAIQEMPVI 429
Query: 293 SAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL 352
SAIC P +K+ N ++ V+GYAWSGGG+ I+RVDVT DQG TWH AN +D+ A +
Sbjct: 430 SAICKPEQSEIIKVINGKINVKGYAWSGGGRKIIRVDVTNDQGETWHTANLDAEDNNAKI 489
Query: 353 TRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
R+W WTLW +PV + KE+ I +D + N P+ +K ++
Sbjct: 490 GRYWSWTLWSVDLPVKKELKEMEIW-------TKAVDASYNVQPESIKNIW 533
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 35/40 (87%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW+KAVD+SYN QPES NIWNLRG L NAYH+++V++
Sbjct: 511 MEIWTKAVDASYNVQPESIKNIWNLRGFLCNAYHKIKVKL 550
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 406 EKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
E ++ + + +CA E + K +KGL WG AVGNATWTG RL D+LK I
Sbjct: 252 EDIKKYPKYTITSAIMCAGNRRSEMSKEKQLKGLNWGIGAVGNATWTGTRLCDILKDLKI 311
Query: 466 SPDQSLDSADVQHVHVE 482
D D H+ E
Sbjct: 312 KED------DYNHIQFE 322
>gi|443709493|gb|ELU04165.1| hypothetical protein CAPTEDRAFT_17949 [Capitella teleta]
Length = 465
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/440 (33%), Positives = 213/440 (48%), Gaps = 78/440 (17%)
Query: 31 HKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQDEVFELLE 90
H ++ IWV ++ G+YDIT+F+ HPGG+ I+ AAG S+EPFW +Y +H EV+E+LE
Sbjct: 16 HNSKEAGIWVTYKDGIYDITDFMIGHPGGDKILLAAGSSVEPFWDLYAIHRSPEVYEILE 75
Query: 91 SYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSL 150
S RIGN+ ED +DPY +P R P LK S KP+NAE P S+L +NF+TP+
Sbjct: 76 SLRIGNLHPEDKVARPAVNPNDPYKHDPARHPALKVNSAKPFNAEAPGSLLADNFITPND 135
Query: 151 LS------------------QVGSSTITLD---------QAIVSKQLSSFKHSD-EKLKL 182
L QVG L+ I + Q + + S+ KLK
Sbjct: 136 LFFVRNHLPVPKVDPKKFRLQVGGKQFALEDLKQKFKQHSVIATVQCAGNRRSELSKLKA 195
Query: 183 VK----------------------VMAGNISQEDSKLAA-----KDIASDPY----VMEP 211
V + + I+ ED K D +PY ME
Sbjct: 196 VNGLSWSHAAISNAEWTGVLLSDLLTSAGINGEDYKHCILQGLDTDGEGNPYEASIPMET 255
Query: 212 VRSPLLKATSLKPYNAEPPPSMLYSSLLRIPFCSHTGK--------VILSDHESTSHWQQ 263
P +A N + P + + LR+ G + S ES SHWQ+
Sbjct: 256 ASDPKKEAIVAFEMNGQELP-LDHGFPLRVIVPGTVGARQVKWVKMISASQEESYSHWQR 314
Query: 264 NDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGK 323
DY FSPST DT D+ K+ AIQE P SAIC P A +E ++ ++GYAWSGGG+
Sbjct: 315 KDYMLFSPSTGHDTADYDKAVAIQEYPTQSAICEPRNGA--TIEGSEVTLRGYAWSGGGR 372
Query: 324 AIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGK 383
I+RV+VT D G+TW+ A+ G D Q + W W LW +PV ++SI
Sbjct: 373 GIMRVEVTPDGGKTWYEADMHG-DEQQKRHQQWAWVLWEVAVPVPDGASDMSIACRA--- 428
Query: 384 KPHDIDFATNATPDQMKAMF 403
ID + N+ P+++++++
Sbjct: 429 ----IDSSHNSQPEKLESVW 444
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 32/40 (80%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I +A+DSS+N+QPE ++WN+RG+++NA+H + +++
Sbjct: 422 MSIACRAIDSSHNSQPEKLESVWNIRGLINNAWHHINLKV 461
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 403 FAEEKVRTFNEKGEKHGTV----CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVD 458
FA E ++ +K ++H + CA E ++K V GL+W HAA+ NA WTG L D
Sbjct: 162 FALEDLK---QKFKQHSVIATVQCAGNRRSELSKLKAVNGLSWSHAAISNAEWTGVLLSD 218
Query: 459 VLKAAGIS 466
+L +AGI+
Sbjct: 219 LLTSAGIN 226
>gi|444518223|gb|ELV12034.1| Sulfite oxidase, mitochondrial [Tupaia chinensis]
Length = 544
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 225/454 (49%), Gaps = 85/454 (18%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 84 YTKEEVSSHNTPETRIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 143
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE------ 135
Q V ELL Y+IG + ED K A SDPY +P+R P LK S +P+NAE
Sbjct: 144 QSHVRELLAQYKIGELDPED-KAAPTLETSDPYADDPMRHPALKVNSQRPFNAEPPAELL 202
Query: 136 ------PPPSMLVENFL-TPSL------LSQVGSS--------------------TITLD 162
P P N L P+L L VG+S T+TL
Sbjct: 203 TENYITPNPIFFTRNHLPVPNLDPDTYRLHVVGASVSQSLCLSLDDLYKFPKHEITVTLQ 262
Query: 163 QAIVSKQ-----------------LSSFKHSDEKLKLVKVMAGN-ISQEDSKLAAKDIAS 204
A + +S+ + + +L V AG+ +S+ D+ + + + S
Sbjct: 263 CAGNRRSEMTRVKEVKGLEWRIGAISTARWAGARLCDVLAQAGHQLSETDAHVCFEGLDS 322
Query: 205 DPYVMEPVRS-PLLKATS-----LKPY--NAEPPP-------SMLYSSLLRIPFCSHTGK 249
DP S PL +A L Y N +P P ++ ++ G+
Sbjct: 323 DPTGTAYGASIPLARAMDPEAEVLLAYEMNGQPLPRDHGFPVRVVVPGVVGGRHVKWLGR 382
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENH 309
V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E+
Sbjct: 383 VSVEPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-QDGE-TVESG 440
Query: 310 QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVDP 369
++ V+GYAWSGGG+A++RVDV++D G TW A G D Q P + W W LW+ PV
Sbjct: 441 EVTVKGYAWSGGGRAVIRVDVSLDGGLTWQAAELHG-DEQRP-RKAWAWRLWQLQAPVPA 498
Query: 370 KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 499 GQKELNIVCKA-------VDDSYNVQPDTVAPIW 525
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 503 LNIVCKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVYV 542
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 23/43 (53%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E VK VKGL W A+ A W GARL DVL AG
Sbjct: 263 CAGNRRSEMTRVKEVKGLEWRIGAISTARWAGARLCDVLAQAG 305
>gi|157104247|ref|XP_001648320.1| sulfite reductase [Aedes aegypti]
gi|108869249|gb|EAT33474.1| AAEL014252-PA [Aedes aegypti]
Length = 515
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 209/443 (47%), Gaps = 78/443 (17%)
Query: 2 EDGVKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI 61
+D KA ++LR LP YS+ + H K+ IWV + GVYDIT FV HPG +
Sbjct: 38 QDISKAHTELR-----KDLPVYSMDQVGEHNSPKTGIWVTYGIGVYDITSFVPKHPGSDK 92
Query: 62 IMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQ--------EDSKLAA------- 106
+M AAG +I+PFW ++ H EV LLE++RIGN+ + +D+ AA
Sbjct: 93 VMLAAGSAIDPFWHIFQQHNTKEVLTLLETFRIGNLREDDVISTQDQDNPWAAEPKRHAI 152
Query: 107 -KDIASDPYVMEPVRSPLLKATSLKP------YNAEPPPSMLVENF---LTPSLLSQVGS 156
K A P+ EP S L+ A L P N P P + ++ + + L + S
Sbjct: 153 LKPTAQRPFNAEPPASILVDAF-LTPNEFFYVRNHLPVPEVDIKEYELEIDVELSDKTKS 211
Query: 157 STITLD-------QAIVSKQLSSFKHSDEKLKLVKVMA---------------------- 187
+ D +V+ + E +++ +
Sbjct: 212 KKLKYDDLRKLPKHKVVATIMCGGNRRGEMMEIKPIKGLSWGPSAVGNAEWAGPRLSDVL 271
Query: 188 ---GNISQEDSKLAAKDIASDPYVMEPVRS-PLLKATSLK-------PYNAEP------- 229
G +S E S + + + DP S PL KA + N EP
Sbjct: 272 KAMGVVSDETSHVHFEGLDVDPTSTPYAASIPLSKAMDPRGDVILAYEMNGEPLSRDHGY 331
Query: 230 PPSMLYSSLLRIPFCSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQEL 289
P ++ ++ G++++S ES SHWQQNDYK FSPSTDWDTVDF +PAIQ +
Sbjct: 332 PVRVIVPGVVGSRNVKWVGRIVVSKEESGSHWQQNDYKSFSPSTDWDTVDFKSAPAIQYM 391
Query: 290 PVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQ 349
PV SAIC P +LK +N + V+GYAWSGGG+ ++RVD+T D G TW VA+ +
Sbjct: 392 PVTSAICSPANGDQLKADNGFITVKGYAWSGGGQEVIRVDLTADGGNTWIVADLDQVEKG 451
Query: 350 APLTRHWGWTLWRATIPVDPKTK 372
RHW W+LW A IP P K
Sbjct: 452 TGRGRHWSWSLWTAKIPAKPGQK 474
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 54/100 (54%), Gaps = 15/100 (15%)
Query: 436 VKGLTWGHA----------AVGNATWTGARLVDVLKAAGISP--DQSLDSADVQH---VH 480
VKG W A G TW A L V K G SL +A +
Sbjct: 415 VKGYAWSGGGQEVIRVDLTADGGNTWIVADLDQVEKGTGRGRHWSWSLWTAKIPAKPGQK 474
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIWS+AVD +YN+QPE+F NIWNLRGV+ NAY R++VE+
Sbjct: 475 LEIWSRAVDDNYNSQPETFKNIWNLRGVVGNAYSRIKVEV 514
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
+C E E+KP+KGL+WG +AVGNA W G RL DVLKA G+ D++ HVH
Sbjct: 232 MCGGNRRGEMMEIKPIKGLSWGPSAVGNAEWAGPRLSDVLKAMGVVSDET------SHVH 285
Query: 481 VE 482
E
Sbjct: 286 FE 287
>gi|18859905|ref|NP_573331.1| CG7280 [Drosophila melanogaster]
gi|25091335|sp|Q9VWP4.1|SUOX_DROME RecName: Full=Probable sulfite oxidase, mitochondrial; Flags:
Precursor
gi|7293520|gb|AAF48894.1| CG7280 [Drosophila melanogaster]
gi|17862040|gb|AAL39497.1| LD05920p [Drosophila melanogaster]
gi|220942938|gb|ACL84012.1| CG7280-PA [synthetic construct]
gi|220953096|gb|ACL89091.1| CG7280-PA [synthetic construct]
Length = 573
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 222/456 (48%), Gaps = 80/456 (17%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP Y +++ H ++ IWV + GVYD+T+FV+ HPGG+ I+ AAG +I+PFW +Y
Sbjct: 108 LPTYRAEEVEQHNSVEKRIWVTYGLGVYDVTDFVENHPGGDKILMAAGSAIDPFWGIYQQ 167
Query: 80 HLQDEVFEL--------LESYRIGNI--------SQEDSKLAAKDIASD-PYVMEPVRSP 122
H EV EL LE + N+ SQE + A AS P+ EP
Sbjct: 168 HNTLEVLELLEGFRIGNLEGLVVTNVDDELGSPWSQEPQRHALLKPASKRPFNAEPPIG- 226
Query: 123 LLKATSLKP------YNAEPPPSMLVENFLTPSLLSQVGSSTITLD-------QAIVSKQ 169
LL P N P P + E++ + T+TLD ++ +
Sbjct: 227 LLAEQFYTPNELFYVRNHLPVPVINPEDYEL-EIEGGAKDKTLTLDGIKALPKHSVTAAI 285
Query: 170 LSSFKHSDE--KLKLVKVMA------GNISQEDSKLA------------AKDIASDPYVM 209
+ E K+K VK ++ GN ++L K + + +
Sbjct: 286 MCGGNRRSEMTKVKAVKGLSWGAGAVGNAKWSGARLCDILREQGVQPDETKHVIFEGADL 345
Query: 210 EPVRSP----LLKATSLKP---------YNAEP-------PPSMLYSSLLRIPFCSHTGK 249
+P P + A +L P N EP P ++ + +
Sbjct: 346 DPTSHPYGASIPLAKALDPRGDVILAYEMNDEPLSRDHGFPIRVIVPGTVGARNVKWLTR 405
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENH 309
++++D ES SHWQQNDYKGFSPSTDWDTVDF+KS AIQ +PV SAIC P A++K+++
Sbjct: 406 IVVADKESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSAICTPQPGARVKVDDD 465
Query: 310 Q--MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ + V+GYAWSGGG+ IVRVD+T D+G +WHVA + + P RH+GW+LW A +PV
Sbjct: 466 EGHITVRGYAWSGGGRKIVRVDLTNDEGVSWHVAEL--EQEEMPDGRHYGWSLWTARLPV 523
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ +++ +D A N P++ + ++
Sbjct: 524 SEAQRRAGDVEIWAKA----VDSAYNVQPEKFEHIW 555
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 37/40 (92%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
VEIW+KAVDS+YN QPE F +IWNLRGVL+NAYH+V+V+I
Sbjct: 533 VEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVKVKI 572
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS 470
+C E +VK VKGL+WG AVGNA W+GARL D+L+ G+ PD++
Sbjct: 286 MCGGNRRSEMTKVKAVKGLSWGAGAVGNAKWSGARLCDILREQGVQPDET 335
>gi|189234936|ref|XP_971620.2| PREDICTED: similar to CG7280 CG7280-PA [Tribolium castaneum]
gi|270001403|gb|EEZ97850.1| hypothetical protein TcasGA2_TC000220 [Tribolium castaneum]
Length = 547
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 107/156 (68%), Gaps = 8/156 (5%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
++I+S+ ES SHWQQNDYKGFSPSTDWDTVDF KSPAIQELPVISAIC P ++ +
Sbjct: 382 ARIIVSEKESDSHWQQNDYKGFSPSTDWDTVDFTKSPAIQELPVISAICQPSEGQTVQTD 441
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ + V+GYAWSGGG+ IVRVDVT+D+G TWHVAN QD+ P +HW WTLW A IPV
Sbjct: 442 DGHILVKGYAWSGGGQKIVRVDVTLDEGDTWHVANLDHQDTAEP-PQHWSWTLWSARIPV 500
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P TK V I +D N P+ K ++
Sbjct: 501 KPGTKTVQIW-------AKAVDSCYNTQPESFKNIW 529
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
Query: 9 SKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGG 68
S +AG LP+YSL D+ H + + IWV +++GVYDIT+FV+ HPGG+ I+ AAG
Sbjct: 72 SDTKAGVAREGLPYYSLQDVSQHCNKDTRIWVTYKEGVYDITDFVEGHPGGDQILLAAGS 131
Query: 69 SIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATS 128
S+EPFW +Y VH V+E+LE+ RIGN+++ED+ +++ SDPY +P R P+L S
Sbjct: 132 SVEPFWMLYAVHNNPHVWEILETLRIGNVTKEDAGKLTENM-SDPYSTDPKRHPVLHPAS 190
Query: 129 LKPYNAEPPPSMLVENFLTPSLLSQV 154
+KP+NAE PP +LV+ F+TP+ L V
Sbjct: 191 VKPFNAETPPFLLVQQFITPNELFYV 216
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 37/40 (92%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
V+IW+KAVDS YNTQPESF NIWNLRGVLSNAYHRV V++
Sbjct: 507 VQIWAKAVDSCYNTQPESFKNIWNLRGVLSNAYHRVTVKL 546
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
+CA E +VKPVKGL+WG AAVGNATWTG RL DVL AG+ D A +HV
Sbjct: 263 MCAGNRRSEMTKVKPVKGLSWGAAAVGNATWTGVRLRDVLALAGVDED-----AAFKHVQ 317
Query: 481 VE 482
E
Sbjct: 318 FE 319
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L+ +++ GN+++ED+ +++ SDPY +P R P+L S+KP+NAE PP +L
Sbjct: 147 HVWEILETLRI--GNVTKEDAGKLTENM-SDPYSTDPKRHPVLHPASVKPFNAETPPFLL 203
Query: 235 YSSLL 239
+
Sbjct: 204 VQQFI 208
>gi|242010807|ref|XP_002426150.1| predicted protein [Pediculus humanus corporis]
gi|212510197|gb|EEB13412.1| predicted protein [Pediculus humanus corporis]
Length = 476
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 107/155 (69%), Gaps = 9/155 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++ILS+ ES SHWQQNDYKGFSPSTDWDTVDF +PAIQELP+ISAIC+P D K++L +
Sbjct: 309 RIILSEKESDSHWQQNDYKGFSPSTDWDTVDFKSAPAIQELPIISAICIPAEDEKVELID 368
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
+ V+GYAWSGGGK IVRVDVT DQG+TWHVA+ + + +RHW WTLW +PV
Sbjct: 369 GCIVVKGYAWSGGGKRIVRVDVTSDQGKTWHVADLEQINEKN--SRHWSWTLWTILLPVP 426
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ V I +D A N P+ ++ ++
Sbjct: 427 EGEETVEIW-------AKAVDSAYNTQPEGIENIW 454
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
Query: 14 GEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPF 73
G+ I LP Y+ SD+ HK ++ IWV+F+ GVYD+T+FV+ HPGG I+ AAG SIEPF
Sbjct: 4 GKFIDNLPVYTESDVAQHKTPETRIWVIFKNGVYDVTDFVEQHPGGTKILLAAGSSIEPF 63
Query: 74 WAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYN 133
WA+Y H EV+ +LE RIGNI ++ KL D + DPY +P R P+LKA S+KP+N
Sbjct: 64 WALYAQHHTAEVYGMLEQLRIGNIKIDEKKL--DDSSLDPYGKDPKRHPVLKAASIKPFN 121
Query: 134 AEPPPSMLVENFLTPS 149
AEPP S+LV+ F TPS
Sbjct: 122 AEPPSSLLVDKFYTPS 137
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
VEIW+KAVDS+YNTQPE NIWNLRGVL+NAYHR++V I
Sbjct: 432 VEIWAKAVDSAYNTQPEGIENIWNLRGVLNNAYHRIKVRI 471
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 398 QMKAMFAEEKVRTFNE--KGEKHGTV----CARMNDKENFEVKPVKGLTWGHAAVGNATW 451
++K + E+K T +E K K+ CA E ++K VKGLTW HAA+GNATW
Sbjct: 159 EIKGIGIEDKSFTLDEIKKFPKYTIAVTIQCAGNRRSEMSKIKQVKGLTWDHAAIGNATW 218
Query: 452 TGARLVDVLKAAGISPDQSLDSADVQHVHVE 482
+GARLVDVLK+ G+ + D++HV E
Sbjct: 219 SGARLVDVLKSCGL----DFNRTDIEHVQFE 245
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
L ++ GNI ++ KL D + DPY +P R P+LKA S+KP+NAEPP S+L
Sbjct: 79 LEQLRIGNIKIDEKKL--DDSSLDPYGKDPKRHPVLKAASIKPFNAEPPSSLL 129
>gi|340725906|ref|XP_003401305.1| PREDICTED: probable sulfite oxidase, mitochondrial-like [Bombus
terrestris]
Length = 559
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 103/156 (66%), Gaps = 7/156 (4%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
++I+S ES S WQQ DYKGFSPSTDWD VDF+K+PAIQE+PVISAIC P +K+
Sbjct: 392 ARIIVSKDESPSQWQQGDYKGFSPSTDWDNVDFSKAPAIQEMPVISAICKPEHAETIKVV 451
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
N ++ V+GYAWSGGG+ I+RVD+T +QG+TW+ AN +D A R+W WTLW +PV
Sbjct: 452 NGKINVKGYAWSGGGRKIIRVDITNNQGKTWYTANLNAEDKNAKEGRYWSWTLWSIDLPV 511
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+KE+ I +D + N P+ K ++
Sbjct: 512 KEGSKEIEIW-------AKAVDASYNVQPESFKNIW 540
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 99/138 (71%), Gaps = 4/138 (2%)
Query: 13 AGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSI 70
GE + L Y+L ++ H + ++ IWV F+QGVYDIT+F++ HPGG +IIM AAG SI
Sbjct: 87 CGEFRADLKTYNLEEVGKHDNKQNRIWVTFKQGVYDITDFIEKHPGGPSKIIM-AAGSSI 145
Query: 71 EPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLK 130
EPFW ++ H +E++ELLES RIGNIS++D+ A + +DPY EP+R +LK K
Sbjct: 146 EPFWVIFANHNTEEIYELLESMRIGNISKDDAASNAIN-ENDPYSKEPIRHKVLKINGQK 204
Query: 131 PYNAEPPPSMLVENFLTP 148
P+ AEPPPS+L+E+F+TP
Sbjct: 205 PFCAEPPPSLLIESFITP 222
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 36/40 (90%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW+KAVD+SYN QPESF NIWNLRG L NAYH+V+V++
Sbjct: 518 IEIWAKAVDASYNVQPESFKNIWNLRGFLCNAYHKVKVKL 557
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 394 ATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTG 453
A + +K E ++ + + +C E + + ++GL+WG AVGNATWTG
Sbjct: 247 AIEEVIKKTLKFEDIKKYPKYTITSAIMCGGNRRSEMAQERQLRGLSWGVGAVGNATWTG 306
Query: 454 ARLVDVLKAAGISPD 468
RL DVLK GI+ D
Sbjct: 307 TRLCDVLKDLGINED 321
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 175 HSDEKLKLVKVM-AGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSM 233
+++E +L++ M GNIS++D+ A + +DPY EP+R +LK KP+ AEPPPS+
Sbjct: 156 NTEEIYELLESMRIGNISKDDAASNAIN-ENDPYSKEPIRHKVLKINGQKPFCAEPPPSL 214
Query: 234 LYSSLL 239
L S +
Sbjct: 215 LIESFI 220
>gi|429851987|gb|ELA27143.1| sulfite oxidase [Colletotrichum gloeosporioides Nara gc5]
Length = 621
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 195/413 (47%), Gaps = 77/413 (18%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYG 78
+LP + L++++ H S WV VYDITE+V HPGGE+I++AAGGSI+P+W ++
Sbjct: 149 SLPRFRLNEVRKHDAKSGSPWVTQGDKVYDITEWVGAHPGGEVILRAAGGSIDPYWDIFT 208
Query: 79 VHLQDEVFELLESYRIGNISQE---DSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
+H V+E+L Y IG I D K AA+ I DP+ +P R P L + KP NAE
Sbjct: 209 IHKSPHVYEILNQYLIGFIDNADLIDGKPAAQSI-EDPFQHDPSRDPRLITLTPKPRNAE 267
Query: 136 PPPSMLVENFLTPSLLSQV----------GSSTITLDQAIVSKQLSSFKHSDEKLK---- 181
P L +++LTP+ L V +S TL ++ + + D K K
Sbjct: 268 TPLEGLADSYLTPNELFYVRNHMWVPEVDDTSDYTLKIELLDGTIKEYTLDDLKTKFKPS 327
Query: 182 -LVKVM--AGNISQEDSKLAAK----------------------DIASDPYVMEPVRSPL 216
+V V+ +GN + ++ A K D+ +D V P+ +
Sbjct: 328 TIVAVLQCSGNRRSDMTRNAKKTNGLQWNVGAISCAEWQGVKLSDVLADAGV--PILETM 385
Query: 217 LKAT--------SLKPYNAE-PPPSMLYSSLLRIPFCSHTGKVILSDHE-------STSH 260
T +L+ Y A P S L + S GK + DH TS
Sbjct: 386 AGDTEAKHVQFMALEAYGASIPIESALDPRGDVLLAYSMNGKPLPRDHGYPLRALMRTSQ 445
Query: 261 WQQNDYKGFSPS---TDWDTVDFAKSPAIQELPVISAI-CLPVADAK-----LKLENHQM 311
WQ+ DYK F P+ DWD+ + IQE+P+ SAI + + D K + +
Sbjct: 446 WQRKDYKCFGPNETKPDWDS-----AAPIQEMPITSAITTVRLGDWKSGTNDAETTGREA 500
Query: 312 EVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH--WGWTLWR 362
++GYA+SGGG+ IVRVDV++D G+TW A + AP H W W WR
Sbjct: 501 SLKGYAYSGGGRRIVRVDVSLDNGKTWDQAELLDEPETAPKAGHKSWAWKRWR 553
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 27/33 (81%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D SYN QPES+A I+N RG L+NA+HR+RV
Sbjct: 576 KATDESYNCQPESYAAIYNQRGNLANAWHRLRV 608
>gi|350397364|ref|XP_003484857.1| PREDICTED: probable sulfite oxidase, mitochondrial-like [Bombus
impatiens]
Length = 559
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 103/156 (66%), Gaps = 7/156 (4%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
++I+S ES S WQQ DYKGFSPSTDWD VDF+K+PAIQE+PVISAIC P +K+
Sbjct: 392 ARIIVSKEESPSQWQQGDYKGFSPSTDWDNVDFSKAPAIQEMPVISAICKPEHAETIKVV 451
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
N ++ V+GYAWSGGG+ I+RVD+T +QG+TW+ A+ +D A R+W WTLW +PV
Sbjct: 452 NGKINVKGYAWSGGGRKIIRVDITNNQGKTWYTADLNAEDKNAKEGRYWSWTLWSIDLPV 511
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+KE+ I +D + N P+ K ++
Sbjct: 512 KEGSKEIEIW-------AKAVDASYNVQPESFKNIW 540
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 100/138 (72%), Gaps = 4/138 (2%)
Query: 13 AGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSI 70
GE + L Y+L ++ H + ++ IWV F+QGVYDIT+F++ HPGG +IIM AAG SI
Sbjct: 87 CGEFRADLKTYNLEEVGKHDNKQNGIWVTFKQGVYDITDFIEKHPGGPSKIIM-AAGSSI 145
Query: 71 EPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLK 130
EPFWA++ H +E++ELLES RIGNIS++D+ A + +DPY EP+R +LK K
Sbjct: 146 EPFWAIFANHNTEEIYELLESMRIGNISKDDAASNAIN-ENDPYSKEPIRHKVLKINGQK 204
Query: 131 PYNAEPPPSMLVENFLTP 148
P+ AEPPPS+L+E+F+TP
Sbjct: 205 PFCAEPPPSLLIESFITP 222
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 36/40 (90%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW+KAVD+SYN QPESF NIWNLRG + NAYHRV+V++
Sbjct: 518 IEIWAKAVDASYNVQPESFKNIWNLRGFVCNAYHRVKVKL 557
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 394 ATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTG 453
A + +K F E +R + + +C E + + ++GL+WG AVGNATWTG
Sbjct: 247 AIEEVIKKTFKFEDIRKYPKYTITSAIMCGGNRRSEMAQERQLRGLSWGVGAVGNATWTG 306
Query: 454 ARLVDVLKAAGISPD 468
RL DVLK GI+ D
Sbjct: 307 TRLCDVLKDLGINED 321
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 148 PSLLSQVGSSTITLDQAIVSKQLSSFKHSDEKLKLVKVM-AGNISQEDSKLAAKDIASDP 206
PS + S+I AI + +++E +L++ M GNIS++D+ A + +DP
Sbjct: 134 PSKIIMAAGSSIEPFWAIFANH-----NTEEIYELLESMRIGNISKDDAASNAIN-ENDP 187
Query: 207 YVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
Y EP+R +LK KP+ AEPPPS+L S +
Sbjct: 188 YSKEPIRHKVLKINGQKPFCAEPPPSLLIESFI 220
>gi|346469145|gb|AEO34417.1| hypothetical protein [Amblyomma maculatum]
Length = 456
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 126/231 (54%), Gaps = 57/231 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG---------------EGTVTAKVLSY 616
MKLDSP+F + FTPE+K L IF++HG++LRIAG + TA +
Sbjct: 40 MKLDSPQFRALFTPEVKELVDIFKRHGHELRIAGGAVRDLLMHKQPHDLDFATTATPIEM 99
Query: 617 RNRREKED----------------RIGENQPFRKLTLSVQ------------------DK 642
+ E E RI + F TL V D
Sbjct: 100 KEMFENEGVRMINSKGEKHGTITARINDKTNFEVTTLRVDVVTDGRHAEVEFTTDWQTDA 159
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R LDGTVYDYF+G EDL+K FVGDPV RIQEDYLRILRYFRF+ RI
Sbjct: 160 NRRDLTVNALFLGLDGTVYDYFHGVEDLEKRRVVFVGDPVQRIQEDYLRILRYFRFYGRI 219
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
P++H+ E+L+AI+ N+ GL ISGERIWTEL KIL G+F+KE++ +++
Sbjct: 220 AVEPDSHEPEILTAIRENVGGLARISGERIWTELKKILVGNFNKELVCRIV 270
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM K+PHD+DFAT ATP +MK MF E VR N KGEKHGT+ AR+NDK NFEV
Sbjct: 75 AVRDLLMHKQPHDLDFATTATPIEMKEMFENEGVRMINSKGEKHGTITARINDKTNFEVT 134
Query: 435 PVK 437
++
Sbjct: 135 TLR 137
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 51/66 (77%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P++H+ E+L+AI++N+ GL ISGERIWTEL KIL G+F+KE++ +++++
Sbjct: 214 RFYGRIAVEPDSHEPEILTAIRENVGGLARISGERIWTELKKILVGNFNKELVCRIVDVG 273
Query: 857 MFPHLG 862
P LG
Sbjct: 274 AAPFLG 279
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 38/41 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHAEV+FT DW+ DANRRDLTVN++FLG+
Sbjct: 133 VTTLRVDVVTDGRHAEVEFTTDWQTDANRRDLTVNALFLGL 173
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNII 795
YQ LL +K K ++E+I E++KY+ +++L+ F W +P FP+NGN++
Sbjct: 354 YQALLFTTKGKIGDVQEWICEVLKYRAEADLLDRFRCWDVPKFPVNGNML 403
>gi|307179781|gb|EFN67971.1| Probable sulfite oxidase, mitochondrial [Camponotus floridanus]
Length = 465
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 104/155 (67%), Gaps = 8/155 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
K+ +S ES S WQQ DYKGFSPST+WD VDF+KSPAIQE+PVISAIC P ++++N
Sbjct: 300 KICVSKQESQSQWQQGDYKGFSPSTNWDNVDFSKSPAIQEMPVISAICDPQDSDVVEIKN 359
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
+++V+GYAWSGGG+ I+RVDVT D+G+TW+ A+ +D QA R+W W+LWR +PV+
Sbjct: 360 GKIQVKGYAWSGGGRKIIRVDVTNDKGKTWYTADLV-EDLQAKQGRYWSWSLWRVELPVE 418
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
E+ I +D A N P+ ++
Sbjct: 419 KNINEIEIW-------AKAVDSAYNVQPESFANIY 446
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 87/127 (68%), Gaps = 2/127 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYGVHL 81
Y++ +I H + ++ IWV FRQGVYDITEFV HPGG I+ AAGGSI+PFW+++ H
Sbjct: 4 YTMEEIGKHDNKENGIWVTFRQGVYDITEFVGKHPGGSSKILMAAGGSIDPFWSIFANHN 63
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
E++ LLES RIGNIS+ED+K D+ D Y EP R L KP+ AEPP SML
Sbjct: 64 TPEIYSLLESMRIGNISEEDAKSNKNDL-YDAYANEPTRHKALIINGHKPFCAEPPSSML 122
Query: 142 VENFLTP 148
VE+F+TP
Sbjct: 123 VESFITP 129
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 37/41 (90%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW+KAVDS+YN QPESFANI+N+RG+L NAY +V++++
Sbjct: 423 EIEIWAKAVDSAYNVQPESFANIYNIRGLLCNAYQKVKIQL 463
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 394 ATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTG 453
A ++K E ++ +++ +C E +VK +KG+ W AVGNATW+G
Sbjct: 154 AIEGEIKKTLDFEAIKKYDKHTITAAVMCGGNRRSEMSKVKKLKGINWNVGAVGNATWSG 213
Query: 454 ARLVDVLKAAGISPD 468
ARL DVL+ GI+ D
Sbjct: 214 ARLCDVLRDLGINED 228
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 188 GNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
GNIS+ED+K D+ D Y EP R L KP+ AEPP SML S +
Sbjct: 77 GNISEEDAKSNKNDLY-DAYANEPTRHKALIINGHKPFCAEPPSSMLVESFI 127
>gi|195392650|ref|XP_002054970.1| GJ19049 [Drosophila virilis]
gi|194149480|gb|EDW65171.1| GJ19049 [Drosophila virilis]
Length = 578
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 107/155 (69%), Gaps = 6/155 (3%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+++++DHES SHWQQNDYKGFSPSTDWDTVDF+K+ AIQ +PV SAIC P+ + ++K++
Sbjct: 412 RIVVTDHESDSHWQQNDYKGFSPSTDWDTVDFSKAQAIQAMPVTSAICTPIPEERVKVDK 471
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
+ V+GYAWSGGG+ I RVD+T D G++WHVA + P RH+GW+LW A +PV
Sbjct: 472 GYITVRGYAWSGGGRRIERVDLTTDGGKSWHVAQL--EQENVPDGRHYGWSLWTARLPVS 529
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ ++ +++ +D A N P+ + ++
Sbjct: 530 DEQQKQPDLEIWAKA----VDSAYNVQPEAFEHIW 560
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 90/134 (67%), Gaps = 6/134 (4%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
S LP YS+ D+ H ++ IWV + GVYD+TEF HPGG+ I+ AAG +I+PFWA+Y
Sbjct: 110 SDLPTYSVEDVLRHDKPENGIWVTYGLGVYDVTEFAPNHPGGDKILMAAGNAIDPFWAIY 169
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDI--ASDPYVMEPVRSPLLKATSLKPYNAE 135
H +EV +LLES+RIGN+ +K+AA D P+ EP R LLK TS +P+NAE
Sbjct: 170 QQHNTEEVLQLLESFRIGNL----NKVAADDDDELGSPWAQEPKRHDLLKPTSKRPFNAE 225
Query: 136 PPPSMLVENFLTPS 149
PP S+L E+F TP+
Sbjct: 226 PPISLLGEHFYTPN 239
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 37/40 (92%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW+KAVDS+YN QPE+F +IWNLRGVL+NAYH+V+V +
Sbjct: 538 LEIWAKAVDSAYNVQPEAFEHIWNLRGVLANAYHKVKVRL 577
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 386 HDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAA 445
++++ + Q+ ++++ + +C E +KPVKGL+WG A
Sbjct: 258 YELELEVESGAGQLSRTLNLDEIKKLPKHTVTAAIMCGGNRRSEMTRIKPVKGLSWGAGA 317
Query: 446 VGNATWTGARLVDVLKAAGISPDQSL 471
VGNA W+GARL DVL+A G+ PD+ L
Sbjct: 318 VGNAKWSGARLCDVLRAQGVKPDERL 343
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 175 HSDEKLKLVKVM-AGNISQEDSKLAAKDI--ASDPYVMEPVRSPLLKATSLKPYNAEPPP 231
+++E L+L++ GN++ K+AA D P+ EP R LLK TS +P+NAEPP
Sbjct: 173 NTEEVLQLLESFRIGNLN----KVAADDDDELGSPWAQEPKRHDLLKPTSKRPFNAEPPI 228
Query: 232 SML 234
S+L
Sbjct: 229 SLL 231
>gi|383848056|ref|XP_003699668.1| PREDICTED: probable sulfite oxidase, mitochondrial-like [Megachile
rotundata]
Length = 548
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 108/156 (69%), Gaps = 7/156 (4%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
K+I+S ES S WQ+ DYKGFSPSTDW+ VDF+K+PAIQE+PV+SAIC+P + +K+
Sbjct: 381 AKIIVSKEESQSQWQRRDYKGFSPSTDWNNVDFSKAPAIQEMPVVSAICVPESSETVKVV 440
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
N ++ V+GYAWSGGG+ I+RVDVT D G+TW+ ANF +DS A R+W WTLW +PV
Sbjct: 441 NGKVNVKGYAWSGGGRKIIRVDVTNDHGKTWYTANFHAEDSNAKEGRYWSWTLWNVDLPV 500
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ ++KE+ I +D + N P+ K ++
Sbjct: 501 NKESKEMEIW-------AKAVDASYNVQPESFKNIW 529
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 115/187 (61%), Gaps = 13/187 (6%)
Query: 5 VKALSK--LRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EI 61
V AL+K ++ GE + L YSL ++ H + K +WV F+QGVYD+T F++ HPGG
Sbjct: 66 VYALNKKDVQCGEFQANLKTYSLEEVGKHDNKKDGVWVTFKQGVYDVTNFIEKHPGGPSK 125
Query: 62 IMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRS 121
++ AAGGSIEPFWA++ H E++ELLE+ RIGNIS+ED+ ++ K SDPY EP+R
Sbjct: 126 LLMAAGGSIEPFWAIFANHNSSEIYELLETMRIGNISEEDT-ISNKLNDSDPYSNEPIRH 184
Query: 122 PLLKATSLKPYNAEPPPSMLVENFLTPSLLSQVGS---------STITLDQAIVSKQLSS 172
LK KP+ AEPP ++L+E+F+TP L V + T TL+ A+ +
Sbjct: 185 KALKINGHKPFCAEPPSALLIESFITPVELFYVRNHLPVPHIDIKTYTLELAVEETTKKT 244
Query: 173 FKHSDEK 179
K D K
Sbjct: 245 LKFEDIK 251
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 36/40 (90%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW+KAVD+SYN QPESF NIWNLRG L NAYH+V++++
Sbjct: 507 MEIWAKAVDASYNVQPESFKNIWNLRGFLCNAYHKVQIKL 546
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 385 PHDIDFATN----ATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLT 440
PH ID T A + K E ++ + + +C E + K +KGL+
Sbjct: 224 PH-IDIKTYTLELAVEETTKKTLKFEDIKRYPKYTITSAIMCGGNRRSEMAKEKELKGLS 282
Query: 441 WGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVE 482
WG AVGNATWTGARL DVLK GI D D H+ E
Sbjct: 283 WGVGAVGNATWTGARLYDVLKDLGIKED------DYNHIQFE 318
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 142 VENFLT-----PSLLSQVGSSTITLDQAIVSKQLSSFKHSDEKLKLVKVM-AGNISQEDS 195
V NF+ PS L +I AI + SS E +L++ M GNIS+ED+
Sbjct: 112 VTNFIEKHPGGPSKLLMAAGGSIEPFWAIFANHNSS-----EIYELLETMRIGNISEEDT 166
Query: 196 KLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
++ K SDPY EP+R LK KP+ AEPP ++L S +
Sbjct: 167 -ISNKLNDSDPYSNEPIRHKALKINGHKPFCAEPPSALLIESFI 209
>gi|170036378|ref|XP_001846041.1| sulfite reductase [Culex quinquefasciatus]
gi|167879013|gb|EDS42396.1| sulfite reductase [Culex quinquefasciatus]
Length = 568
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 89/125 (71%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G++I+S ES SHWQQNDYK FSPSTDWDTVDF +PAIQ +PV SAIC P + K+K E
Sbjct: 403 GRIIVSKQESGSHWQQNDYKSFSPSTDWDTVDFKSAPAIQNMPVTSAICSPASGEKIKAE 462
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
N + V+GYAWSGGG+ ++RVD+++D G +W VA+ + RHW W+LW A IPV
Sbjct: 463 NGFVTVKGYAWSGGGQEVIRVDLSVDGGNSWIVADLDQVEKNTGRGRHWSWSLWTAKIPV 522
Query: 368 DPKTK 372
P K
Sbjct: 523 KPGQK 527
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 92/132 (69%), Gaps = 2/132 (1%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP Y++ DIQ H S IWV + GVYDI+ FV HPG + +M AAG +I+PFW +Y
Sbjct: 106 LPVYAMEDIQKHNSPASGIWVTYGIGVYDISSFVPKHPGSDKVMLAAGSAIDPFWHIYQQ 165
Query: 80 HLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPS 139
H EV LLES+RIGN+ +ED ++ KD +P+ EP R P+L+A + +P+NAEPPPS
Sbjct: 166 HNTKEVLTLLESFRIGNL-KEDDVISTKD-QDNPWAGEPKRHPILRAATERPFNAEPPPS 223
Query: 140 MLVENFLTPSLL 151
MLV++FLTP+ L
Sbjct: 224 MLVDSFLTPNEL 235
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 35/40 (87%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIWS+AVD +YN QPE+F NIWNLRGV+ NAY RV+VE+
Sbjct: 528 LEIWSRAVDDNYNGQPETFKNIWNLRGVVGNAYSRVKVEV 567
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 403 FAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKA 462
F E ++ F + +C E EVKP+KGL WG AAVGNA W+G RLVDVLKA
Sbjct: 267 FKYEDLKKFPKVTVTAAIMCGGNRRGEMMEVKPIKGLPWGPAAVGNAQWSGVRLVDVLKA 326
Query: 463 AGISPDQSLDSADVQHVHVE 482
G+ D+ V HV E
Sbjct: 327 MGVESDE------VSHVQFE 340
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 188 GNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
GN+ +ED ++ KD +P+ EP R P+L+A + +P+NAEPPPSML S L
Sbjct: 181 GNL-KEDDVISTKD-QDNPWAGEPKRHPILRAATERPFNAEPPPSMLVDSFL 230
>gi|427789507|gb|JAA60205.1| Putative trna nucleotidyltransferase/polya polymerase
[Rhipicephalus pulchellus]
Length = 460
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 123/231 (53%), Gaps = 57/231 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRI-------------------AGEGTVTAK 612
MKLDSP+F + FTPE+K L IF++HG++LRI A T T
Sbjct: 43 MKLDSPQFRALFTPEVKELVDIFKRHGHELRIAGGAVRDLLMHKQPHDLDFATTATPTEM 102
Query: 613 VLSYRN--------RREKED----RIGENQPFRKLTLSVQ------------------DK 642
+ N R EK RI + F TL V D
Sbjct: 103 KEMFENEGVRMINTRGEKHGTITARINDKTNFEVTTLRVDVVTDGRHAEVEFTTDWHTDA 162
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R LDGTVYDYF G EDL+K AFVGDP RIQEDYLRILRYFRF+ RI
Sbjct: 163 NRRDLTVNALFLGLDGTVYDYFRGVEDLEKRRVAFVGDPAQRIQEDYLRILRYFRFYGRI 222
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
P++H+ E L+AI+ N+ GL ISGER+WTEL KIL G+F+KE+M +++
Sbjct: 223 AVEPDSHEPETLTAIRENVGGLARISGERLWTELKKILVGNFNKELMCRIV 273
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 48/63 (76%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM K+PHD+DFAT ATP +MK MF E VR N +GEKHGT+ AR+NDK NFEV
Sbjct: 78 AVRDLLMHKQPHDLDFATTATPTEMKEMFENEGVRMINTRGEKHGTITARINDKTNFEVT 137
Query: 435 PVK 437
++
Sbjct: 138 TLR 140
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 52/70 (74%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P++H+ E L+AI++N+ GL ISGER+WTEL KIL G+F+KE+M +++++
Sbjct: 217 RFYGRIAVEPDSHEPETLTAIRENVGGLARISGERLWTELKKILVGNFNKELMCRIVDVG 276
Query: 857 MFPHLGTDET 866
P LG E+
Sbjct: 277 AAPFLGLPES 286
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHAEV+FT DW DANRRDLTVN++FLG+
Sbjct: 136 VTTLRVDVVTDGRHAEVEFTTDWHTDANRRDLTVNALFLGL 176
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNII 795
+Q LL +K K ++E+I E++KY+ +EL++ F W +P FP+NGN++
Sbjct: 357 FQALLFTTKGKVGDVQEWICEVLKYRADAELLERFRCWDVPKFPVNGNML 406
>gi|156553494|ref|XP_001600634.1| PREDICTED: probable sulfite oxidase, mitochondrial-like [Nasonia
vitripennis]
Length = 565
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 97/158 (61%), Gaps = 8/158 (5%)
Query: 247 TGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKL 306
K+I S ES S +QQNDYKGFSPS DWD VDF +PAIQELPV SAIC+P ++ +
Sbjct: 397 CNKIIFSKDESPSQFQQNDYKGFSPSIDWDNVDFKTAPAIQELPVTSAICIPQRGERITV 456
Query: 307 E-NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATI 365
+ N + V+GYAWSG GK I+RVDVT+DQG TWH+A QD A RH+ WTLW +
Sbjct: 457 DKNGTIPVKGYAWSGSGKKIIRVDVTVDQGETWHIAKLVAQDPDAKEGRHYAWTLWSLDL 516
Query: 366 PVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
PVD V I +D A N P+ K ++
Sbjct: 517 PVDKTKGSVEIW-------VKAVDSAYNTQPESFKNIW 547
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 96/151 (63%), Gaps = 8/151 (5%)
Query: 5 VKALSKLRAGEPIST------LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPG 58
V+AL K E IS LP YS ++ H + + IWV +++GVY+IT+FV HPG
Sbjct: 79 VQALRKEAVQEEISCGIRRKDLPTYSSEEVSQHDNPNNGIWVSYKEGVYNITDFVTKHPG 138
Query: 59 GE-IIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVME 117
G+ IM AAGGSI+PFW ++ H + E+ ELLES RIGN+ ED D DPY +E
Sbjct: 139 GQNKIMMAAGGSIDPFWMVFANHNKSEILELLESMRIGNLRSEDVYKKTAD-TFDPYALE 197
Query: 118 PVRSPLLKATSLKPYNAEPPPSMLVENFLTP 148
PVRS +LK +P+ AEPPP +LV+NF TP
Sbjct: 198 PVRSKILKVNGKQPFCAEPPPPLLVKNFKTP 228
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 36/40 (90%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
VEIW KAVDS+YNTQPESF NIWNLRG L NAYHRV+V++
Sbjct: 525 VEIWVKAVDSAYNTQPESFKNIWNLRGFLCNAYHRVKVDL 564
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 394 ATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTG 453
A D E ++ + + +C E + KP++GL+W A+GNA+W+G
Sbjct: 253 AVEDDTIKTLTLEDIKKYPKYTVTSAIMCGGNRRSEMADAKPLRGLSWSVGAIGNASWSG 312
Query: 454 ARLVDVLKAAGISPDQSLDSADVQHVHVE 482
ARL DVL G+ + D HV E
Sbjct: 313 ARLCDVLNGLGVKEE------DYNHVQFE 335
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 178 EKLKLVKVM-AGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
E L+L++ M GN+ ED D DPY +EPVRS +LK +P+ AEPPP +L
Sbjct: 165 EILELLESMRIGNLRSEDVYKKTAD-TFDPYALEPVRSKILKVNGKQPFCAEPPPPLL 221
>gi|332029561|gb|EGI69450.1| tRNA-nucleotidyltransferase 1, mitochondrial [Acromyrmex
echinatior]
Length = 463
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 122/231 (52%), Gaps = 57/231 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIA--------------------------- 604
MKLDSPEFHS FTPEL++LA +F+K+ Y+LRIA
Sbjct: 35 MKLDSPEFHSIFTPELEKLASLFKKYSYKLRIAGGAVRDILMGKQPKDLDFATDATPQQM 94
Query: 605 ---------------GE--GTVTAKVLSYRNRREKEDRI--------GENQPFRKLTLSV 639
GE GT+TA++ N RI + + + L
Sbjct: 95 KDMFTSEEIRMINEKGEKHGTITARINDMENFEVTTLRIDVLTNGRHAQVEFTKDWKLDA 154
Query: 640 QDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+D + LDG VYDYF G++DLKK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 155 NRRDLTINSMFLDLDGRVYDYFYGYDDLKKKRVVFVGKASIRIQEDYLRILRYFRFYGRI 214
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
++PN H E + A+K N+ GL ISGERIW+E NKIL G+F+ E+ LK+L
Sbjct: 215 MDSPNQHDEATIIALKENIGGLEQISGERIWSEWNKILSGTFALELTLKLL 265
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMGK+P D+DFAT+ATP QMK MF E++R NEKGEKHGT+ AR+ND ENFEV
Sbjct: 70 AVRDILMGKQPKDLDFATDATPQQMKDMFTSEEIRMINEKGEKHGTITARINDMENFEVT 129
Query: 435 PVK--GLTWG-HAAV 446
++ LT G HA V
Sbjct: 130 TLRIDVLTNGRHAQV 144
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 39/41 (95%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV T+GRHA+V+FT+DWKLDANRRDLT+NSMFL +
Sbjct: 128 VTTLRIDVLTNGRHAQVEFTKDWKLDANRRDLTINSMFLDL 168
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI ++PN H E + A+K+N+ GL ISGERIW+E NKIL G+F+ E+ LK+LE
Sbjct: 209 RFYGRIMDSPNQHDEATIIALKENIGGLEQISGERIWSEWNKILSGTFALELTLKLLECG 268
Query: 857 MFPHLGTDETFATLDFEGLF 876
++G E +F ++
Sbjct: 269 SSRYIGLPEEPDVENFRKIY 288
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 746 YQNLLLFSKLKA-TTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQF 798
YQ L+L ++K ++E + EL++Y+ +L+ +F +W +P FP+NGN++ ++
Sbjct: 350 YQQLVLLQQIKRYDVLKEDVKELLRYRGAIQLLDEFEQWVIPKFPINGNMLIKY 403
>gi|195132715|ref|XP_002010788.1| GI21511 [Drosophila mojavensis]
gi|193907576|gb|EDW06443.1| GI21511 [Drosophila mojavensis]
Length = 573
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 105/155 (67%), Gaps = 6/155 (3%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+++++DHES SHWQQNDYKGFSPSTDWDTVDF K+ AIQ +PV SAIC P+ + ++K++
Sbjct: 407 RIVVADHESDSHWQQNDYKGFSPSTDWDTVDFGKAQAIQAMPVTSAICSPMPEERVKVDK 466
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
+ V GYAWSGGG+ I RVD+T D G+TWHVA + P RH+GW+LW +PV
Sbjct: 467 GHITVYGYAWSGGGRRIERVDLTNDGGKTWHVAKL--EQENEPDGRHYGWSLWSIRLPVT 524
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ ++ S +++ +D A N P+ + ++
Sbjct: 525 DEQQKQSELEIWAKA----VDSAYNVQPESFENIW 555
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 86/137 (62%), Gaps = 2/137 (1%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
+ LP YS D+ H + IWV + GVYD+TEF HPGG+ IM AAG +I+PFWA+Y
Sbjct: 104 TDLPTYSTEDVLKHDKPDTGIWVTYGIGVYDVTEFAPNHPGGDKIMMAAGNAIDPFWAIY 163
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
H +V ELLES+RIGN+ + ++ D P+ EP R LLK S +P+NAEPP
Sbjct: 164 QQHNTLDVLELLESFRIGNLYKVEA--IENDELGSPWAQEPKRHELLKPASKRPFNAEPP 221
Query: 138 PSMLVENFLTPSLLSQV 154
SML E+F TP+ L V
Sbjct: 222 ISMLGEHFYTPNELFYV 238
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 38/40 (95%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW+KAVDS+YN QPESF NIWNLRGVL+NAYH+V+V++
Sbjct: 533 LEIWAKAVDSAYNVQPESFENIWNLRGVLANAYHKVKVKL 572
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 400 KAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDV 459
K F ++++ + +C E +KPVKGL+WG AVGNA W GARL DV
Sbjct: 267 KCTFNLDEIKKLPKHTVTAAIMCGGNRRSEMTRIKPVKGLSWGAGAVGNAKWAGARLCDV 326
Query: 460 LKAAGISPDQSL 471
L+A G+ PD+ L
Sbjct: 327 LRAQGVEPDEHL 338
>gi|194892723|ref|XP_001977715.1| GG18090 [Drosophila erecta]
gi|190649364|gb|EDV46642.1| GG18090 [Drosophila erecta]
Length = 571
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 110/157 (70%), Gaps = 8/157 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+++++D ES SHWQQNDYKGFSPSTDWDTVDF+KS AIQ +PV SAIC P A++K+++
Sbjct: 403 RIVVADKESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSAICTPQPGARVKVDD 462
Query: 309 HQ--MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
++ + V+GYAWSGGG+ IVRVD+T D+G +WHVA + + P RH+GW+LW A +P
Sbjct: 463 NEGHITVRGYAWSGGGRKIVRVDLTNDEGVSWHVAEL--EQEEMPDGRHYGWSLWTARLP 520
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
V ++ +++ +D A N P++ + ++
Sbjct: 521 VSEAQRKAGDVEIWAKA----VDSAYNVQPEKFEHIW 553
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Query: 2 EDGVKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI 61
E+ ++A ++L LP Y ++ H + +WV + GVYD+T+F + HPGG+
Sbjct: 88 EEELEATARLWHVTTRKELPTYRADQVEQHNCAEKRVWVTYGLGVYDVTDFAENHPGGDK 147
Query: 62 IMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRS 121
I+ AAG +I+PFWA+Y H EV ELLE +RIGN+ + A ++ S P+ EP R
Sbjct: 148 ILMAAGSAIDPFWAIYQQHNTLEVLELLEGFRIGNLEGQVVTNAEDELGS-PWSQEPQRH 206
Query: 122 PLLKATSLKPYNAEPPPSMLVENFLTPSLL 151
LLK S +P+NAEPP +L + F TP+ L
Sbjct: 207 ALLKPASKRPFNAEPPIGLLADQFYTPNDL 236
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 37/40 (92%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
VEIW+KAVDS+YN QPE F +IWNLRGVL+NAYH+V+V+I
Sbjct: 531 VEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVKVKI 570
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 406 EKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
E+V+ + +C E ++K VKGL+WG AVGNA W+GARL DVL+ G+
Sbjct: 269 EEVKALPKHSVTAAIMCGGNRRSEMTKIKAVKGLSWGAGAVGNAKWSGARLCDVLREQGV 328
Query: 466 SPDQS 470
PD++
Sbjct: 329 QPDET 333
>gi|195174698|ref|XP_002028109.1| GL21319 [Drosophila persimilis]
gi|194115849|gb|EDW37892.1| GL21319 [Drosophila persimilis]
Length = 524
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 95/121 (78%), Gaps = 4/121 (3%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKL-- 306
+++++DHES SHWQQNDYKGFSPSTDWDTVDF+K+ AIQ +PV SAIC P+ ++K+
Sbjct: 350 RIMVADHESDSHWQQNDYKGFSPSTDWDTVDFSKAEAIQAMPVTSAICTPLPGERVKVDP 409
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+ + V+GYAWSGGG+ I+RVD+T D+G+TWHVA +DS P RH+GW+LW A +P
Sbjct: 410 QGGYITVRGYAWSGGGRKILRVDLTGDEGKTWHVAELEQEDS--PDGRHYGWSLWTARLP 467
Query: 367 V 367
+
Sbjct: 468 I 468
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 68/112 (60%), Gaps = 4/112 (3%)
Query: 38 IWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNI 97
W+ R Y T + HPGG+ IM AAG +I+PFWA+Y H EV ELLES+RIGN+
Sbjct: 69 FWLTQR---YSSTPDEENHPGGDKIMMAAGSAIDPFWAIYQQHNTLEVLELLESFRIGNL 125
Query: 98 SQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPS 149
A ++ S P+ EPVR LLK S +P+NAEPP +L E F TP+
Sbjct: 126 EGLTVPNAEDELGS-PWAQEPVRHALLKPASKRPFNAEPPIGLLAEKFYTPN 176
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 37/40 (92%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW+KAVDS+YN QPE F +IWNLRGVL+NAYH+V+V++
Sbjct: 484 LEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVKVKL 523
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSL 471
+C E +K VKGL+WG AVGNA W+GARL DVL+ G+ P++S+
Sbjct: 231 MCGGNRRSEMTHIKAVKGLSWGAGAVGNAKWSGARLCDVLREQGVQPNESM 281
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 199 AKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
A+D P+ EPVR LLK S +P+NAEPP +L
Sbjct: 133 AEDELGSPWAQEPVRHALLKPASKRPFNAEPPIGLL 168
>gi|195432567|ref|XP_002064288.1| GK20089 [Drosophila willistoni]
gi|194160373|gb|EDW75274.1| GK20089 [Drosophila willistoni]
Length = 564
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 108/156 (69%), Gaps = 8/156 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++++SD ES SHWQQNDYKGFSPSTDWDTVDF+K+ AIQ +PV SAIC P+ D +K+ +
Sbjct: 396 RIVVSDSESDSHWQQNDYKGFSPSTDWDTVDFSKADAIQAMPVTSAICSPLPDEHIKVND 455
Query: 309 H-QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+++V GYAWSGGG+ IVRVD+TID G+TWHVA + P RH+GW+LW +PV
Sbjct: 456 KGEIKVHGYAWSGGGRKIVRVDITIDHGQTWHVAEL--EQENIPDGRHYGWSLWTVHLPV 513
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
K + ++ + K +D A N P++ + ++
Sbjct: 514 ---AKSQTGQNVEIWAKA--VDSAYNVQPERFENIW 544
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 94/168 (55%), Gaps = 18/168 (10%)
Query: 5 VKALSKLRAGEPI------------------STLPWYSLSDIQNHKDLKSSIWVVFRQGV 46
K+ SK+ A EPI + LP Y +Q H ++ +W+ + GV
Sbjct: 63 TKSNSKVVAAEPIKLDIVTEESARLWHKTQRTDLPTYKPEQVQQHNTHETGVWITYGLGV 122
Query: 47 YDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAA 106
YD++EF HPGG+ I+ AAG +I+PFWA+Y H E+ +LLES+RIGN+ + +
Sbjct: 123 YDVSEFAPNHPGGDKILMAAGSAIDPFWAIYQQHNSLEILQLLESFRIGNLERPEGSNID 182
Query: 107 KDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSLLSQV 154
+ S P+ EP R LLKA S +P+NAEPP ML E F TP+ L V
Sbjct: 183 DEEESSPWSEEPQRHALLKAASQRPFNAEPPIGMLGEQFYTPNKLFYV 230
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 38/42 (90%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEIW 521
+VEIW+KAVDS+YN QPE F NIWNLRGVL+NAYH+V++ IW
Sbjct: 521 NVEIWAKAVDSAYNVQPERFENIWNLRGVLANAYHKVKIRIW 562
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 385 PHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHA 444
P D + + E ++ + +C E + KPVKGL+WG
Sbjct: 241 PDDYELEIEMEGSSKQLTLKLEDIKALPKHTVTAAIMCGGNRRSEMTKFKPVKGLSWGAG 300
Query: 445 AVGNATWTGARLVDVLKAAGISPDQ 469
AVGNA W+GARL D+L+A G+ P++
Sbjct: 301 AVGNAKWSGARLCDLLQAQGVQPNE 325
>gi|198469725|ref|XP_001355104.2| GA20233 [Drosophila pseudoobscura pseudoobscura]
gi|198147005|gb|EAL32160.2| GA20233 [Drosophila pseudoobscura pseudoobscura]
Length = 584
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 95/121 (78%), Gaps = 4/121 (3%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKL-- 306
+++++DHES SHWQQNDYKGFSPSTDWDTVDF+K+ AIQ +PV SAIC P+ ++K+
Sbjct: 410 RIMVADHESDSHWQQNDYKGFSPSTDWDTVDFSKAEAIQAMPVTSAICTPLPGERVKVDP 469
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+ + V+GYAWSGGG+ I+RVD+T D+G+TWHVA +DS P RH+GW+LW A +P
Sbjct: 470 QGGYITVRGYAWSGGGRKILRVDLTGDEGKTWHVAELEQEDS--PDGRHYGWSLWTARLP 527
Query: 367 V 367
+
Sbjct: 528 I 528
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 87/144 (60%), Gaps = 1/144 (0%)
Query: 6 KALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKA 65
+A+++L P LP Y ++ H IW+ + GVYD+TEF + HPGG+ IM A
Sbjct: 94 EAVARLWHVTPRKDLPTYKAEQVEQHNAPDKGIWITYGLGVYDVTEFAENHPGGDKIMMA 153
Query: 66 AGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLK 125
AG +I+PFWA+Y H EV ELLES+RIGN+ A ++ S P+ EP R LLK
Sbjct: 154 AGSAIDPFWAIYQQHNTLEVLELLESFRIGNLEGLTVPNAEDELGS-PWAKEPERHALLK 212
Query: 126 ATSLKPYNAEPPPSMLVENFLTPS 149
S +P+NAEPP +L E F TP+
Sbjct: 213 PASKRPFNAEPPIGLLAEKFYTPN 236
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 37/40 (92%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW+KAVDS+YN QPE F +IWNLRGVL+NAYH+V+V++
Sbjct: 544 LEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVKVKL 583
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSL 471
+C E +K VKGL+WG AVGNA W+GARL DVL+ G+ P++S+
Sbjct: 291 MCGGNRRSEMTHIKAVKGLSWGAGAVGNAKWSGARLCDVLREQGVQPNESM 341
>gi|195567605|ref|XP_002105726.1| GD15611 [Drosophila simulans]
gi|194204756|gb|EDX18332.1| GD15611 [Drosophila simulans]
Length = 903
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 109/157 (69%), Gaps = 8/157 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+++++D ES SHWQQNDYKGFSPSTDWDTVDF+KS AIQ +PV SAIC P A++K+++
Sbjct: 405 RIVVADKESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSAICTPQPGARVKVDD 464
Query: 309 HQ--MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+ + V+GYAWSGGG+ IVRVD+T D+G +WHVA + + P RH+GW+LW A +P
Sbjct: 465 DEGHITVRGYAWSGGGRKIVRVDLTNDEGVSWHVAEL--EQEEMPDGRHYGWSLWTARLP 522
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
V ++ +++ +D A N P++ + ++
Sbjct: 523 VSEAQRKAGDVEIWAKA----VDSAYNVQPEKFEHIW 555
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 92/158 (58%), Gaps = 11/158 (6%)
Query: 2 EDGVKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI 61
E+ ++A ++L LP Y +++ H + IWV + GVYD+T+F + HPGG+
Sbjct: 90 EEELEATARLWHVTNRKELPTYRADEVEQHNCAEKRIWVTYGLGVYDVTDFAENHPGGDK 149
Query: 62 IMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGN-----ISQEDSKLAAKDIASDPYVM 116
I+ AAG +I+PFWA+Y H EV ELLE +RIGN ++ D +L + P+
Sbjct: 150 ILMAAGSAIDPFWAIYQQHNTLEVLELLEGFRIGNLEGLVVTNVDDELGS------PWSQ 203
Query: 117 EPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSLLSQV 154
EP R LLK S +P+NAEPP +L E F TP+ L V
Sbjct: 204 EPQRHALLKPASKRPFNAEPPIGLLAEQFYTPNELFYV 241
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRV 516
VEIW+KAVDS+YN QPE F +IWNLRGVL+NAYH+V
Sbjct: 533 VEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKV 568
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 406 EKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
E ++ + +C E +VK VKGL+WG AVGNA W+GARL DVL+ G+
Sbjct: 271 EGIKALPKHSVTAAIMCGGNRRSEMTKVKAVKGLSWGAGAVGNAKWSGARLCDVLREQGV 330
Query: 466 SPDQS 470
PD++
Sbjct: 331 QPDET 335
>gi|410919421|ref|XP_003973183.1| PREDICTED: sulfite oxidase, mitochondrial-like [Takifugu rubripes]
Length = 567
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 95/134 (70%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
S LP ++ D+ H+ L+ +WV ++ GVYDITEFV MHPGG+ I+ AAGG++EPFW++Y
Sbjct: 89 SALPIFTQEDVTGHRTLEDGVWVTYKGGVYDITEFVAMHPGGDKILLAAGGALEPFWSLY 148
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
VH Q+ V E+L Y++G +S ED K SDPY +PVR P L+ SLKP+NAEPP
Sbjct: 149 AVHNQEHVLEILSEYKVGELSAEDLKKQQSVTTSDPYSSDPVRHPALRVNSLKPFNAEPP 208
Query: 138 PSMLVENFLTPSLL 151
P +L ++++TPS +
Sbjct: 209 PEILSDSYITPSAI 222
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 100/158 (63%), Gaps = 9/158 (5%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV +S ES SHWQQNDYKGFSP TDWDTVDF +PAIQELP+ SAI P ++
Sbjct: 393 GKVTVSAEESGSHWQQNDYKGFSPGTDWDTVDFKSAPAIQELPIQSAITAPADGGVVERS 452
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLT--RHWGWTLWRATI 365
+ ++ V+GYAWSGGG+ +VRVDV++D G+TW VA +++AP R W W LW
Sbjct: 453 SEEVTVKGYAWSGGGREVVRVDVSLDGGKTWQVAQLKDGENEAPPPPGRAWAWKLWEVQA 512
Query: 366 PVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P+ P+ +E+ I+ +D + N PD + ++
Sbjct: 513 PLPPEAQELEIICKA-------VDNSYNMQPDSVPPIW 543
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 34/40 (85%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EI KAVD+SYN QP+S IWNLRGVLSNA+HRV+V+I
Sbjct: 521 LEIICKAVDNSYNMQPDSVPPIWNLRGVLSNAWHRVKVKI 560
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 36/56 (64%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQ 477
CA E +VK VKGL WG AA+ NATW+GA+L DVL AAG PD + + VQ
Sbjct: 273 CAGNRRSEMNKVKQVKGLNWGIAAISNATWSGAKLRDVLLAAGYGPDVAKWARHVQ 328
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 174 KHSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSM 233
+H E L KV G +S ED K SDPY +PVR P L+ SLKP+NAEPPP +
Sbjct: 154 EHVLEILSEYKV--GELSAEDLKKQQSVTTSDPYSSDPVRHPALRVNSLKPFNAEPPPEI 211
Query: 234 LYSSLL 239
L S +
Sbjct: 212 LSDSYI 217
>gi|195481504|ref|XP_002101672.1| GE15486 [Drosophila yakuba]
gi|194189196|gb|EDX02780.1| GE15486 [Drosophila yakuba]
Length = 571
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 109/157 (69%), Gaps = 8/157 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+++++D ES SHWQQNDYKGFSPSTDWDTVDF+KS AIQ +PV SAIC P A++K+++
Sbjct: 403 RIVVADKESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSAICTPQPGARVKVDD 462
Query: 309 HQ--MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+ + V+GYAWSGGG+ IVRVD+T D+G +WHVA + + P RH+GW+LW A +P
Sbjct: 463 DEGHITVRGYAWSGGGRKIVRVDLTNDEGVSWHVAEL--EQEEIPDGRHYGWSLWTARLP 520
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
V ++ +++ +D A N P++ + ++
Sbjct: 521 VTEAQRKAGDVEIWAKA----VDSAYNVQPEKFEHIW 553
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP Y ++ H + IWV + GVYD+T+F HPGG+ I+ AAG +I+PFWA+Y
Sbjct: 106 LPNYRAEQVEQHNCAEKRIWVTYGLGVYDVTDFADNHPGGDKILMAAGSAIDPFWAIYQQ 165
Query: 80 HLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPS 139
H EV ELLE +RIGN+ + A +++ S P+ EP R LLK S +P+NAEPP
Sbjct: 166 HNTLEVLELLEGFRIGNLEGQVVTNADEELGS-PWSQEPQRHALLKPASKRPFNAEPPIG 224
Query: 140 MLVENFLTPSLL 151
+L + F TP+ L
Sbjct: 225 LLADQFYTPNDL 236
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 37/40 (92%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
VEIW+KAVDS+YN QPE F +IWNLRGVL+NAYH+V+V+I
Sbjct: 531 VEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVKVKI 570
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 406 EKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
E ++ + +C E +VK VKGL+WG AVGNA W+GARL DVL+ G+
Sbjct: 269 EGIKALPKHSVTAAIMCGGNRRSEMTKVKAVKGLSWGAGAVGNAKWSGARLCDVLREQGV 328
Query: 466 SPDQS 470
PD+S
Sbjct: 329 QPDES 333
>gi|195373257|ref|XP_002046005.1| GM10077 [Drosophila sechellia]
gi|194122910|gb|EDW44953.1| GM10077 [Drosophila sechellia]
Length = 200
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 109/157 (69%), Gaps = 8/157 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+++++D ES SHWQQNDYKGFSPSTDWDTVDF+KS AIQ +PV SAIC P A++K+++
Sbjct: 32 RIVVADKESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSAICTPQPGARVKVDD 91
Query: 309 HQ--MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+ + V+GYAWSGGG+ IVRVD+T D+G +WHVA + + P RH+GW+LW A +P
Sbjct: 92 DEGHITVRGYAWSGGGRKIVRVDLTNDEGVSWHVAEL--EQEEIPDGRHYGWSLWTARLP 149
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
V ++ +++ +D A N P++ + ++
Sbjct: 150 VSEAQRKAGDVEIWAKA----VDSAYNVQPEKFEHIW 182
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 37/40 (92%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
VEIW+KAVDS+YN QPE F +IWNLRGVL+NAYH+V+V+I
Sbjct: 160 VEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVKVKI 199
>gi|194769544|ref|XP_001966864.1| GF19247 [Drosophila ananassae]
gi|190618385|gb|EDV33909.1| GF19247 [Drosophila ananassae]
Length = 574
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 109/159 (68%), Gaps = 10/159 (6%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+++++D ES SHWQQNDYKGFSPSTDWDTVDF+KS AIQ +PV SAIC P ++++++
Sbjct: 404 RIVVADQESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSAICTPQPGSRVRVDE 463
Query: 309 HQ----MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRAT 364
+ + V+GYAWSGGG+ IVRVD+T D+G++WHVA +D P RH+GW+LW A
Sbjct: 464 DKDGGHVTVRGYAWSGGGRKIVRVDLTNDEGQSWHVAELEQEDQ--PDGRHYGWSLWTAR 521
Query: 365 IPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+PV ++ +++ +D A N P++ + ++
Sbjct: 522 LPVTEAQRKGGDLEIWAKA----VDSAYNVQPEKFEHIW 556
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 88/137 (64%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
S LP Y + +++H ++ IWV + GVYD+T+F + HPGG+ IM AAG +I+PFWA+Y
Sbjct: 102 SDLPTYKQAQVESHNSAEARIWVTYGLGVYDVTDFAENHPGGDKIMMAAGSAIDPFWAIY 161
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
H EV ELLE +RIGN+ ++ + + P+ EP R LLK S +P+NAEPP
Sbjct: 162 QQHNTLEVLELLEGFRIGNLEGGLAETSVETELGSPWAQEPQRHALLKPASKRPFNAEPP 221
Query: 138 PSMLVENFLTPSLLSQV 154
ML ENFLTP+ L V
Sbjct: 222 IGMLAENFLTPNELFYV 238
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 37/40 (92%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW+KAVDS+YN QPE F +IWNLRGVL+NAYH+VRV++
Sbjct: 534 LEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVRVKL 573
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 408 VRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISP 467
+R + +C E + K VKGL+WG AVGNA W+GARL DVL G+ P
Sbjct: 272 IRALPKHSVTAAIMCGGNRRSEMTKFKAVKGLSWGAGAVGNAKWSGARLCDVLAQQGVKP 331
Query: 468 DQS 470
D++
Sbjct: 332 DET 334
>gi|156395513|ref|XP_001637155.1| predicted protein [Nematostella vectensis]
gi|156224265|gb|EDO45092.1| predicted protein [Nematostella vectensis]
Length = 472
Score = 155 bits (393), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 98/155 (63%), Gaps = 9/155 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
KVI S ES SHWQQNDYKGF+P TDWDTVDF SPAIQ+LPV SAIC P+ + +
Sbjct: 305 KVISSKEESPSHWQQNDYKGFAPCTDWDTVDFKSSPAIQDLPVTSAICQPLPGTLISRDE 364
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ + GYAWSGGG+ +VRVDV++D G+ W +A G+D P R W W+LW T+P+
Sbjct: 365 EEITLSGYAWSGGGRRVVRVDVSLDGGKNWSIATLDGKDQ--PPGRAWAWSLWSTTLPIP 422
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P ++ ++ +D + N PD + ++
Sbjct: 423 PDANKLDVVCKA-------VDESFNVQPDSVAPIW 450
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 103/160 (64%), Gaps = 6/160 (3%)
Query: 27 DIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHLQDEV 85
++ H + KS IWV ++ GVYDIT+F+ HPGG I+ AAG ++EP+WAMY VH ++EV
Sbjct: 8 EVSKHNNRKSRIWVTYKGGVYDITDFIDGHPGGTSKIILAAGAALEPYWAMYAVHKKEEV 67
Query: 86 FELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENF 145
E+LE YRIG+++ ED + K+ DP+ +P R P LK S KP+NAEPP +L +++
Sbjct: 68 LEILEEYRIGDLAHEDQVIEFKE--DDPFKEDPERHPALKKNSEKPFNAEPPLQLLGDSY 125
Query: 146 LTPSLLSQVGSSTITLDQAIVSKQLSSFKHSDEKLKLVKV 185
+TP+ L V + L ++ +L + + E ++ +K+
Sbjct: 126 ITPNELFFVRNH---LPVPVIDPKLYRIEVTGEGVRTIKL 162
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHR 515
+++ KAVD S+N QP+S A IWNLRGVLSNA+HR
Sbjct: 428 LDVVCKAVDESFNVQPDSVAPIWNLRGVLSNAWHR 462
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 414 KGEKHGTV----CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQ 469
K +KH V CA + VK VKGL W A+ A W GA L DVLK AG+S D
Sbjct: 170 KFKKHNIVSTIQCAGNRRSDMNRVKKVKGLDWSEGAISTAEWGGALLKDVLKYAGLSEDD 229
Query: 470 SLDSADVQHVHVE 482
++ ++ HV E
Sbjct: 230 -VERLEINHVQFE 241
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 188 GNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
G+++ ED + K+ DP+ +P R P LK S KP+NAEPP +L S +
Sbjct: 77 GDLAHEDQVIEFKE--DDPFKEDPERHPALKKNSEKPFNAEPPLQLLGDSYI 126
>gi|241236739|ref|XP_002400930.1| sulfite-dehydrogenase, putative [Ixodes scapularis]
gi|215496109|gb|EEC05750.1| sulfite-dehydrogenase, putative [Ixodes scapularis]
Length = 485
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 101/156 (64%), Gaps = 9/156 (5%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G + LS ES+S WQQNDYKGF PSTDWDTVDF +PAIQELP+ S +C P + +KL+
Sbjct: 320 GSIRLSAEESSSFWQQNDYKGFCPSTDWDTVDFKSAPAIQELPITSVVCSPTEGSTVKLK 379
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+++ V+GYAWSGGG+ +VRVDV+ D G+TW A +D L + WGWTLWR + V
Sbjct: 380 GNKLPVKGYAWSGGGRRVVRVDVSADGGQTWVPAQLHSEDDT--LHKAWGWTLWRVDLEV 437
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P T E+ ++ +D + NA P+ + ++
Sbjct: 438 PPGTAELQVVCKA-------VDSSYNAQPENAEGVW 466
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 71/120 (59%)
Query: 7 ALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAA 66
A K RA +P+ LP YS D+ H + IWV ++ GVYD+T+FV +HPGG+ I+ A
Sbjct: 2 AEPKSRADDPVPGLPEYSADDVARHATKEDRIWVSYKSGVYDVTDFVDVHPGGDNILLGA 61
Query: 67 GGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKA 126
GG I+PFW +Y VH E+ +LE +RIGN+ D + + I++ P R P +A
Sbjct: 62 GGGIDPFWNLYAVHKTPEILGMLEGFRIGNLKASDVRRGGRGISTTRTQPTPGRHPRAQA 121
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 22/104 (21%)
Query: 435 PVKGLTWGH----------AAVGNATWTGARL---VDVL-KAAGISPDQSLDSADVQ--- 477
PVKG W +A G TW A+L D L KA G +L D++
Sbjct: 384 PVKGYAWSGGGRRVVRVDVSADGGQTWVPAQLHSEDDTLHKAWG----WTLWRVDLEVPP 439
Query: 478 -HVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+++ KAVDSSYN QPE+ +WNLRGVL+NA+HRVRV++
Sbjct: 440 GTAELQVVCKAVDSSYNAQPENAEGVWNLRGVLNNAWHRVRVKV 483
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 397 DQMKAMFAEEKVRTFNEKGEKHGTV-CARMNDKENFEVKPVKGLTWGHAAVGNATWTGAR 455
D + E ++T EK V CA E +VK VKGL WG A+GNATW+GAR
Sbjct: 175 DGESQVLTLEDIKTKFEKVTITSVVQCAGNRRSELNKVKKVKGLEWGPCAIGNATWSGAR 234
Query: 456 LVDVLKAAGISPD 468
L+DVL G+ D
Sbjct: 235 LIDVLHHLGMDTD 247
>gi|157103593|ref|XP_001648047.1| sulfite reductase [Aedes aegypti]
gi|108869391|gb|EAT33616.1| AAEL014110-PA [Aedes aegypti]
Length = 575
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 86/126 (68%)
Query: 247 TGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKL 306
G++++S ES SHWQQNDYK FSPSTDWDTVDF +PAIQ +PV SAIC P +LK
Sbjct: 409 VGRIVVSKEESGSHWQQNDYKSFSPSTDWDTVDFKSAPAIQYMPVTSAICSPANGDQLKA 468
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+N + V+GYAWSGGG+ ++RVD+T D G TW VA+ + RHW W+LW A IP
Sbjct: 469 DNGFITVKGYAWSGGGQEVIRVDLTADGGNTWIVADLDQMEKGTGRGRHWSWSLWTAKIP 528
Query: 367 VDPKTK 372
P K
Sbjct: 529 AKPGQK 534
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 95/148 (64%), Gaps = 7/148 (4%)
Query: 2 EDGVKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI 61
+D KA ++LR LP YS+ + H K+ IWV + GVYDIT FV HPG +
Sbjct: 98 QDISKAHTELR-----KDLPVYSMDQVGEHNSPKTGIWVTYGIGVYDITTFVPKHPGSDK 152
Query: 62 IMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRS 121
+M AAG +I+PFW ++ H EV LLE++RIGN+ +ED ++ +D +P+ EP R
Sbjct: 153 VMLAAGSAIDPFWHIFQQHNTKEVLTLLETFRIGNL-REDDVISTQD-QDNPWAAEPKRH 210
Query: 122 PLLKATSLKPYNAEPPPSMLVENFLTPS 149
+LK T+ +P+NAEPP S+LV+ FLTP+
Sbjct: 211 AILKPTAQRPFNAEPPASILVDAFLTPN 238
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 36/40 (90%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIWS+AVD +YN+QPE+F NIWNLRGV+ NAY R++VE+
Sbjct: 535 LEIWSRAVDDNYNSQPETFKNIWNLRGVVGNAYSRIKVEV 574
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
+C E E+KP+KGL+WG +AVGNA W G RL DVLKA G+ D++ HVH
Sbjct: 292 MCGGNRRGEMMEIKPIKGLSWGPSAVGNAEWAGPRLSDVLKAMGVESDET------SHVH 345
Query: 481 VE 482
E
Sbjct: 346 FE 347
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 188 GNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
GN+ +ED ++ +D +P+ EP R +LK T+ +P+NAEPP S+L + L
Sbjct: 186 GNL-REDDVISTQD-QDNPWAAEPKRHAILKPTAQRPFNAEPPASILVDAFL 235
>gi|345490794|ref|XP_003426461.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
isoform 2 [Nasonia vitripennis]
gi|345490796|ref|XP_003426462.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
isoform 3 [Nasonia vitripennis]
Length = 451
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 151/312 (48%), Gaps = 81/312 (25%)
Query: 574 LDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG---------------EGTVTAKVLSYRN 618
LDSPEF S FTPEL L+ IF++H Y+LR+AG + TA + +
Sbjct: 18 LDSPEFKSIFTPELNTLSDIFKRHNYELRVAGGAVRDILMGKHPKDLDFATTATPVEMKE 77
Query: 619 RREKED----------------RIGENQPFRKLTLSVQ------------------DKDR 644
KE+ RI + + F TL V D R
Sbjct: 78 MFTKEEVRMINCNGEKHGTITSRINDKENFEVTTLRVDVVTDGRHADVVFTTDWLLDASR 137
Query: 645 S--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
LDG VYDYF G++DL K AFVG+P RI ED+LRI RYFRF+ RI +
Sbjct: 138 RDLTINSMFLDLDGKVYDYFYGYDDLMKRRVAFVGEPAQRICEDFLRIFRYFRFYGRIAD 197
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM----------LY 746
P+NH E+ ++AIK N+ GL ISGERIW+E +KIL G+F +E+ LK+ L
Sbjct: 198 VPDNHDEKTITAIKENVKGLEIISGERIWSEWSKILAGNFHRELTLKLIECGCSKYMGLP 257
Query: 747 QNLLL--FSKLKATTMRE--------YIVELMKYKEKSELIKDFHKWRLPTFPMNGN--I 794
+NL L F+K+ + I L+ +E E+++ F + R P F N I
Sbjct: 258 ENLNLEHFNKICLNAQKNNVKLRPISLIAALLHTEE--EVLQLFMRLRFPNFDRNLALFI 315
Query: 795 IRQFFARICNNP 806
++ ++C NP
Sbjct: 316 VQHREEKLCENP 327
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMGK P D+DFAT ATP +MK MF +E+VR N GEKHGT+ +R+NDKENFEV
Sbjct: 51 AVRDILMGKHPKDLDFATTATPVEMKEMFTKEEVRMINCNGEKHGTITSRINDKENFEVT 110
Query: 435 PVK 437
++
Sbjct: 111 TLR 113
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P+NH E+ ++AIK+N+ GL ISGERIW+E +KIL G+F +E+ LK++E
Sbjct: 190 RFYGRIADVPDNHDEKTITAIKENVKGLEIISGERIWSEWSKILAGNFHRELTLKLIECG 249
Query: 857 MFPHLGTDETF 867
++G E
Sbjct: 250 CSKYMGLPENL 260
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHA+V FT DW LDA+RRDLT+NSMFL +
Sbjct: 109 VTTLRVDVVTDGRHADVVFTTDWLLDASRRDLTINSMFLDL 149
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQF 798
YQ ++L + K + +RE++ EL++YK +L+++F KW FP+NG +++ +
Sbjct: 331 YQRVVLKTIGKVSDVREFVSELLRYKGSLDLLEEFEKWD-SRFPINGGMVKPY 382
>gi|47220688|emb|CAG11757.1| unnamed protein product [Tetraodon nigroviridis]
Length = 439
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 99/159 (62%), Gaps = 9/159 (5%)
Query: 247 TGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKL 306
G++ +S ES SHWQQNDYKGFSP TDWDTVD+ +PAIQELPV SAI P A ++
Sbjct: 270 VGRITVSAEESGSHWQQNDYKGFSPGTDWDTVDYKSAPAIQELPVQSAITSPADGAAVEG 329
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQA--PLTRHWGWTLWRAT 364
+ ++ V+GYAWSGGG+ +VRVDV++D G+TW VA G QA P R W W LW
Sbjct: 330 SSQEVTVRGYAWSGGGREVVRVDVSLDGGKTWQVARLEGGQDQAPPPPGRAWAWKLWELQ 389
Query: 365 IPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P+ P +E+ I+ +D + N PD + ++
Sbjct: 390 APLPPGAQELEIVCKA-------VDSSYNVQPDSVLPIW 421
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 92/129 (71%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQ 82
++ ++ +H+ L+ +WV +R GVYDITEFV +HPGG+ I+ AAGG++EPFW++Y VH Q
Sbjct: 2 FTQEEVTSHRSLEDGVWVTYRGGVYDITEFVAVHPGGDKILLAAGGALEPFWSLYAVHNQ 61
Query: 83 DEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLV 142
+ V E+L Y++G +S ED K +DPY +PVR P L+ SLKP+NAEPP +L
Sbjct: 62 EHVLEILSEYKVGELSAEDLKKQRSVQTADPYSSDPVRHPGLRVNSLKPFNAEPPSEILS 121
Query: 143 ENFLTPSLL 151
++++TPS +
Sbjct: 122 DSYITPSAI 130
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 34/40 (85%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EI KAVDSSYN QP+S IWNLRGVLSNA+HRVRV++
Sbjct: 399 LEIVCKAVDSSYNVQPDSVLPIWNLRGVLSNAWHRVRVKV 438
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 34/55 (61%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADV 476
CA E EVK VKGL WG AA+ NATW GA+L DVL AAG P+ + DV
Sbjct: 181 CAGNRRSEMNEVKQVKGLNWGIAAISNATWGGAKLRDVLLAAGYRPEAVSEDGDV 235
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 174 KHSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSM 233
+H E L KV G +S ED K +DPY +PVR P L+ SLKP+NAEPP +
Sbjct: 62 EHVLEILSEYKV--GELSAEDLKKQRSVQTADPYSSDPVRHPGLRVNSLKPFNAEPPSEI 119
Query: 234 LYSSLL 239
L S +
Sbjct: 120 LSDSYI 125
>gi|289742043|gb|ADD19769.1| sulfite oxidase [Glossina morsitans morsitans]
Length = 596
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 105/158 (66%), Gaps = 12/158 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V +++ ES+SHWQQNDYKGFSPSTDWDTVDF KSPAIQ +PV SAIC P K+K+
Sbjct: 430 RVTVANKESSSHWQQNDYKGFSPSTDWDTVDFTKSPAIQAMPVTSAICSPNVGEKVKISP 489
Query: 309 HQ-MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ V+GYAWSGGG+ IVRVD+T ++G++W+VA+ +D P RH+GW+LW IPV
Sbjct: 490 KGFITVRGYAWSGGGRRIVRVDITANKGKSWYVADLEQED--LPDGRHYGWSLWTVHIPV 547
Query: 368 DP--KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
D + +E+ I +D A N P+ ++
Sbjct: 548 DKSLRGQEIEIWSKA-------VDSAYNVQPESFHNIW 578
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP Y + D+ H L++ +WV + GVYDIT+F+ HPG + IM AG +I+PFWA+Y
Sbjct: 127 LPTYEIDDVHKHNSLENRVWVTYGIGVYDITDFIPKHPGSDKIMLGAGNAIDPFWAIYQQ 186
Query: 80 HLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPS 139
H E+ LLE +RIGNI ED+ + D+ S P+ EP R PLLK TS +P+NAEPP +
Sbjct: 187 HNTKEILTLLEQFRIGNIRLEDN-VGTDDMGS-PWAYEPKRHPLLKPTSERPFNAEPPIN 244
Query: 140 MLVENFLTPS 149
+L E+F TP+
Sbjct: 245 LLAESFYTPN 254
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/38 (86%), Positives = 36/38 (94%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
+EIWSKAVDS+YN QPESF NIWNLRGVLSNAYHRV+V
Sbjct: 556 IEIWSKAVDSAYNVQPESFHNIWNLRGVLSNAYHRVKV 593
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSL 471
+C E EVK VKGL+W AVGNA W+G L DVL A G+ D+SL
Sbjct: 311 MCGGNRRSEMTEVKAVKGLSWNAGAVGNARWSGVLLRDVLIAMGVKSDESL 361
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 188 GNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSL 238
GNI ED+ + D+ S P+ EP R PLLK TS +P+NAEPP ++L S
Sbjct: 202 GNIRLEDN-VGTDDMGS-PWAYEPKRHPLLKPTSERPFNAEPPINLLAESF 250
>gi|345490792|ref|XP_003426460.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
isoform 1 [Nasonia vitripennis]
Length = 487
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 151/312 (48%), Gaps = 81/312 (25%)
Query: 574 LDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG---------------EGTVTAKVLSYRN 618
LDSPEF S FTPEL L+ IF++H Y+LR+AG + TA + +
Sbjct: 54 LDSPEFKSIFTPELNTLSDIFKRHNYELRVAGGAVRDILMGKHPKDLDFATTATPVEMKE 113
Query: 619 RREKED----------------RIGENQPFRKLTLSVQ------------------DKDR 644
KE+ RI + + F TL V D R
Sbjct: 114 MFTKEEVRMINCNGEKHGTITSRINDKENFEVTTLRVDVVTDGRHADVVFTTDWLLDASR 173
Query: 645 S--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
LDG VYDYF G++DL K AFVG+P RI ED+LRI RYFRF+ RI +
Sbjct: 174 RDLTINSMFLDLDGKVYDYFYGYDDLMKRRVAFVGEPAQRICEDFLRIFRYFRFYGRIAD 233
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM----------LY 746
P+NH E+ ++AIK N+ GL ISGERIW+E +KIL G+F +E+ LK+ L
Sbjct: 234 VPDNHDEKTITAIKENVKGLEIISGERIWSEWSKILAGNFHRELTLKLIECGCSKYMGLP 293
Query: 747 QNLLL--FSKLKATTMRE--------YIVELMKYKEKSELIKDFHKWRLPTFPMNGN--I 794
+NL L F+K+ + I L+ +E E+++ F + R P F N I
Sbjct: 294 ENLNLEHFNKICLNAQKNNVKLRPISLIAALLHTEE--EVLQLFMRLRFPNFDRNLALFI 351
Query: 795 IRQFFARICNNP 806
++ ++C NP
Sbjct: 352 VQHREEKLCENP 363
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMGK P D+DFAT ATP +MK MF +E+VR N GEKHGT+ +R+NDKENFEV
Sbjct: 87 AVRDILMGKHPKDLDFATTATPVEMKEMFTKEEVRMINCNGEKHGTITSRINDKENFEVT 146
Query: 435 PVK 437
++
Sbjct: 147 TLR 149
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P+NH E+ ++AIK+N+ GL ISGERIW+E +KIL G+F +E+ LK++E
Sbjct: 226 RFYGRIADVPDNHDEKTITAIKENVKGLEIISGERIWSEWSKILAGNFHRELTLKLIECG 285
Query: 857 MFPHLGTDETF 867
++G E
Sbjct: 286 CSKYMGLPENL 296
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHA+V FT DW LDA+RRDLT+NSMFL +
Sbjct: 145 VTTLRVDVVTDGRHADVVFTTDWLLDASRRDLTINSMFLDL 185
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQF 798
YQ ++L + K + +RE++ EL++YK +L+++F KW FP+NG +++ +
Sbjct: 367 YQRVVLKTIGKVSDVREFVSELLRYKGSLDLLEEFEKWD-SRFPINGGMVKPY 418
>gi|312381951|gb|EFR27559.1| hypothetical protein AND_05670 [Anopheles darlingi]
Length = 350
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 118/230 (51%), Gaps = 46/230 (20%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV----------TAKVLSYRNRR- 620
MK+DSPEFHS FT ELK L +F+++ Y++RIAG V + + N R
Sbjct: 48 MKIDSPEFHSIFTQELKDLIALFKRYNYEIRIAGGADVDIATTATPTQMKDIFTTENIRM 107
Query: 621 -----EKED----RIGENQPFRKLTLSVQ------------------DKDRS-------- 645
EK RI + + F TL + D +R
Sbjct: 108 VNMNGEKHGTITPRINDKECFEITTLRLDVVTDGRHAEVVHTTDWLLDANRRDLTINSMF 167
Query: 646 FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEV 705
DGT+YDYF G+EDL+K AFVGDP +RI+EDYLRILRYFRF+ RI N H E
Sbjct: 168 LGFDGTLYDYFYGYEDLQKRRVAFVGDPDTRIKEDYLRILRYFRFYGRIAECANRHDAET 227
Query: 706 LSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKL 755
L I NN GL ISGERIW E KIL G+F E+ +M+ NL + L
Sbjct: 228 LRIITNNATGLAKISGERIWQEWKKILTGNFGTELTTEMIKCNLAVHCGL 277
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 35/41 (85%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR+DV TDGRHAEV T DW LDANRRDLT+NSMFLG
Sbjct: 130 ITTLRLDVVTDGRHAEVVHTTDWLLDANRRDLTINSMFLGF 170
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 387 DIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVK 437
D+D AT ATP QMK +F E +R N GEKHGT+ R+NDKE FE+ ++
Sbjct: 84 DVDIATTATPTQMKDIFTTENIRMVNMNGEKHGTITPRINDKECFEITTLR 134
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI N H E L I N GL ISGERIW E KIL G+F E+ +M++ N
Sbjct: 211 RFYGRIAECANRHDAETLRIITNNATGLAKISGERIWQEWKKILTGNFGTELTTEMIKCN 270
Query: 857 MFPHLGTDET 866
+ H G E+
Sbjct: 271 LAVHCGLPES 280
>gi|187608330|ref|NP_001120571.1| sulfite oxidase [Xenopus (Silurana) tropicalis]
gi|171847138|gb|AAI61540.1| LOC100145725 protein [Xenopus (Silurana) tropicalis]
Length = 568
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 93/134 (69%), Gaps = 2/134 (1%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
ST P YS D+ H ++S +WV + V+DITEF+++HPGG IM AAGG++EPFWA+Y
Sbjct: 96 STFPLYSKKDVSKHASMESRVWVTYEGEVFDITEFIELHPGGSRIMLAAGGALEPFWALY 155
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
GVH + V E+L+ Y++G ++ + + SDPY EP R P+LK S+KP+NAEPP
Sbjct: 156 GVHKNEHVLEILKEYKVGELNSAEKDEPVDE--SDPYSQEPSRHPVLKVNSMKPFNAEPP 213
Query: 138 PSMLVENFLTPSLL 151
P ML ENF+TP+ L
Sbjct: 214 PYMLTENFITPTDL 227
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 96/157 (61%), Gaps = 10/157 (6%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GK+I+S ES SHWQQNDYKGF+P DWD VDFA SP+IQ+LPV SAI P K+
Sbjct: 401 GKIIVSKEESGSHWQQNDYKGFNPCVDWDNVDFASSPSIQDLPVQSAITEPHPGQKVTPN 460
Query: 308 -NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
++ V+GYAWSGGG+ IVRVDV++D G+TW VA TG+ + + W W LW+ +P
Sbjct: 461 FEGELTVKGYAWSGGGREIVRVDVSVDGGKTWKVAELTGEKQKT--GQAWAWKLWQLNVP 518
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ +I+ +D + N PD + ++
Sbjct: 519 FPSNISDFTIICKA-------VDSSYNVQPDTVAPIW 548
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%)
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
I KAVDSSYN QP++ A IWNLRGVL+NA+HRV V +
Sbjct: 528 IICKAVDSSYNVQPDTVAPIWNLRGVLNNAWHRVHVTV 565
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 174 KHSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSM 233
+H E LK KV N +++D + SDPY EP R P+LK S+KP+NAEPPP M
Sbjct: 161 EHVLEILKEYKVGELNSAEKDEPVDE----SDPYSQEPSRHPVLKVNSMKPFNAEPPPYM 216
Query: 234 LYSSLLRIPFCSHTGKVILSDHESTSHWQQNDYK 267
L + F + T +H NDYK
Sbjct: 217 LTEN-----FITPTDLFFKRNHLPVPRINPNDYK 245
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA E VKPVKGL W A+ A W GARL DVL AG + D S QHVH
Sbjct: 282 CAGNRRSEMSAVKPVKGLDWNSGAISTAHWAGARLRDVLLEAGYTEDCS----QAQHVHF 337
Query: 482 E 482
E
Sbjct: 338 E 338
>gi|432859902|ref|XP_004069293.1| PREDICTED: sulfite oxidase, mitochondrial-like [Oryzias latipes]
Length = 567
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 91/130 (70%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP + ++ H+ L +WV FR GVYDIT+FV MHPGGE I+ AAGG++EPFWA+Y V
Sbjct: 93 LPVFGQEEVSKHRSLSEGVWVTFRGGVYDITDFVAMHPGGEKILLAAGGALEPFWALYAV 152
Query: 80 HLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPS 139
H Q+ V E+L Y++G + ED K +SDPY +P R P+L+ SLKP+NAEPPP
Sbjct: 153 HNQEHVLEILSEYKVGELCAEDLKKQEPAESSDPYSTDPDRHPVLRVNSLKPFNAEPPPE 212
Query: 140 MLVENFLTPS 149
+L ++++TPS
Sbjct: 213 ILTDSYITPS 222
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 4/135 (2%)
Query: 247 TGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKL 306
GK+ +S ES+SHWQQ DYKGF P TDW+TVD+ +PAIQELPV SAI P A +
Sbjct: 394 VGKIAVSAEESSSHWQQYDYKGFPPGTDWNTVDYKSAPAIQELPVQSAITSPADGALIDS 453
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQD----SQAPLTRHWGWTLWR 362
+ + V+GYAWSGGG+ +VRVDV++D G+TW VA D + P R W W LW
Sbjct: 454 SDGFLTVKGYAWSGGGREVVRVDVSLDGGQTWQVAKLRSSDEAHEAPPPPGRAWAWKLWE 513
Query: 363 ATIPVDPKTKEVSIM 377
T P+ P +E+ I+
Sbjct: 514 LTAPLPPPAQELEII 528
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 34/40 (85%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EI KAVDSSYN QPE+F IWNLRG+LSNA+HRV V+I
Sbjct: 525 LEIICKAVDSSYNVQPETFPPIWNLRGLLSNAWHRVTVKI 564
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 403 FAEEKVRTFNEKGEKHGTV-CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLK 461
F+ E ++T K + TV CA E K VKGL+WG +A+ NA W+GARL DVL
Sbjct: 255 FSLEDLKTRFPKHDVTATVQCAGNRRSEMDREKQVKGLSWGISAISNAKWSGARLRDVLL 314
Query: 462 AAGISPDQSLDSADVQHVHVE 482
AAG PD + + +HVH E
Sbjct: 315 AAGFGPDVAQWA---RHVHFE 332
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 174 KHSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSM 233
+H E L KV G + ED K +SDPY +P R P+L+ SLKP+NAEPPP +
Sbjct: 156 EHVLEILSEYKV--GELCAEDLKKQEPAESSDPYSTDPDRHPVLRVNSLKPFNAEPPPEI 213
Query: 234 LYSSLL 239
L S +
Sbjct: 214 LTDSYI 219
>gi|348507691|ref|XP_003441389.1| PREDICTED: sulfite oxidase, mitochondrial-like [Oreochromis
niloticus]
Length = 579
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 7 ALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAA 66
L +A E S LP S ++ H+ LK +WV ++ GVYDITEFV MHPGGE IM AA
Sbjct: 87 GLHHHKAIEKSSPLPIISQEEVTRHRSLKDGVWVTYKGGVYDITEFVSMHPGGEKIMMAA 146
Query: 67 GGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKA 126
GG+IEPFW++Y VH Q+ V ++L Y++G + ED K +SDPY +P R P+L A
Sbjct: 147 GGAIEPFWSLYAVHNQEHVLDILSGYKVGELDAEDLKKQYTFKSSDPYSSDPERHPVLHA 206
Query: 127 TSLKPYNAEPPPSMLVENFLTPS 149
SLKP+ AEPPP +L ++++TP+
Sbjct: 207 NSLKPFTAEPPPEILSDSYITPT 229
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 12/161 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GK+++S ES+SHWQQ DYKGFSP DWDTVD+ +PAIQELPV SAI P + +
Sbjct: 402 GKIVVSAEESSSHWQQKDYKGFSPGIDWDTVDYKSAPAIQELPVQSAITTPREGSVIDRS 461
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQA-----PLTRHWGWTLWR 362
+ V+GYAWSGGG+ ++RVDV++D G+TW+VA D + PL R W W LW
Sbjct: 462 EEMLTVKGYAWSGGGREVIRVDVSLDGGKTWNVAKLKSSDKEGDQTSPPLGRAWAWKLWE 521
Query: 363 ATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T+P+ P+ +E+ ++ +D + N PD ++
Sbjct: 522 ITVPLPPEAQELELICKA-------VDNSYNTQPDTFGPIW 555
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 35/40 (87%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+E+ KAVD+SYNTQP++F IWN+RG+L NA+HRV+V+I
Sbjct: 533 LELICKAVDNSYNTQPDTFGPIWNVRGLLGNAWHRVKVKI 572
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 35/56 (62%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQ 477
CA E + K VKGL WG A+GNATW+GA+L DVL AAG PD + + VQ
Sbjct: 282 CAGNRRSEMNKAKQVKGLNWGVGAIGNATWSGAKLRDVLLAAGYGPDVAQWARHVQ 337
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 188 GNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
G + ED K +SDPY +P R P+L A SLKP+ AEPPP +L S +
Sbjct: 175 GELDAEDLKKQYTFKSSDPYSSDPERHPVLHANSLKPFTAEPPPEILSDSYI 226
>gi|241674815|ref|XP_002400153.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215504191|gb|EEC13685.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 455
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 149/307 (48%), Gaps = 70/307 (22%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIA--------------------------- 604
MKLDSP+F + FTPE+K L IF +HG++LRIA
Sbjct: 39 MKLDSPQFRALFTPEVKELVDIFRRHGHELRIAGGAVRDLLMHKAPQDLDFATTATPNQM 98
Query: 605 ---------------GE--GTVTAKVLSYRNRREKEDRI-----GENQPFRKLTLSVQDK 642
GE GTVTA++ N RI G + T D
Sbjct: 99 KSMFEDEGVRMINTKGEKHGTVTARINDKTNFEVTTLRIDVVTDGRHAEVEFTTDWETDA 158
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R LDGTVYD+F+G EDL+K AFVGD RI+EDYLRILRYFRF+ RI
Sbjct: 159 NRRDLTVNALFLGLDGTVYDFFHGIEDLEKRRVAFVGDAAQRIREDYLRILRYFRFYGRI 218
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSK 754
P++H+ EVL+AI+ N+ GL ISGER+W EL KIL G+F++E++ +++ + F
Sbjct: 219 AVEPDSHEPEVLTAIRENVGGLGGISGERLWVELKKILVGNFNRELVCRLVDLGVSPFLG 278
Query: 755 LKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVL 814
L + +VE K E+S+ + FP ++ N H L
Sbjct: 279 LPESP---DLVEFEKVCERSKHL----------FPQPTTLLAALLQTEAEVLNMHARLKL 325
Query: 815 SAIKKNL 821
SA +++L
Sbjct: 326 SAYERDL 332
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 49/63 (77%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM K P D+DFAT ATP+QMK+MF +E VR N KGEKHGTV AR+NDK NFEV
Sbjct: 74 AVRDLLMHKAPQDLDFATTATPNQMKSMFEDEGVRMINTKGEKHGTVTARINDKTNFEVT 133
Query: 435 PVK 437
++
Sbjct: 134 TLR 136
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 4/94 (4%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P++H+ EVL+AI++N+ GL ISGER+W EL KIL G+F++E++ +++++
Sbjct: 213 RFYGRIAVEPDSHEPEVLTAIRENVGGLGGISGERLWVELKKILVGNFNRELVCRLVDLG 272
Query: 857 MFPHLGTDETFATLDFEGLFRS----MPIPFTLL 886
+ P LG E+ ++FE + P P TLL
Sbjct: 273 VSPFLGLPESPDLVEFEKVCERSKHLFPQPTTLL 306
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV TDGRHAEV+FT DW+ DANRRDLTVN++FLG+
Sbjct: 132 VTTLRIDVVTDGRHAEVEFTTDWETDANRRDLTVNALFLGL 172
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNII 795
YQ LL +K K ++E+I E++KY+ +EL++ F W +P FP+NGN++
Sbjct: 353 YQALLFTTKGKVGDVQEWICEVLKYRADAELLERFRCWDVPRFPVNGNML 402
>gi|194745490|ref|XP_001955221.1| GF18651 [Drosophila ananassae]
gi|190628258|gb|EDV43782.1| GF18651 [Drosophila ananassae]
Length = 487
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 153/344 (44%), Gaps = 76/344 (22%)
Query: 506 RGVLSNAYHRVRVEIWSKAVDSSYNTQPENGHPSGYQPRATLQGARLLTRPPNPHSVRFK 565
R V S A + + W K S P +P P A Q L +PP + +
Sbjct: 13 RAVTSLALNLRQSSRWIKTAGS---MGPSPSNPRDASPEAVAQ----LGKPP-----KMR 60
Query: 566 SGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGT---------------VT 610
P K K+DSPEF S FTPEL+ L +F+K+ Y+LRIAG T
Sbjct: 61 KDPAFK-KVDSPEFKSIFTPELESLVSLFKKYDYELRIAGGAVRDILMNMEPKDIDLATT 119
Query: 611 AKVLSYRNRREKED----------------RIGENQPFRKLTLSVQ-------------- 640
A + EKE+ RI + + F TL +
Sbjct: 120 ATPSQMKEMFEKEEVRMINANGEKHGTITPRINDKENFEVTTLRIDIRTDGRHAEVVYTT 179
Query: 641 ----DKDRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYF 688
D +R LDGTVYDYF G++DL++ FVGD RI+EDYLRILRYF
Sbjct: 180 DWQLDANRRDLTINSMFLGLDGTVYDYFYGYDDLQERRVVFVGDADIRIKEDYLRILRYF 239
Query: 689 RFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQN 748
RF+ RI + H E L A+K+N GL ISGERIWTEL KI+ G+F +++L+M +
Sbjct: 240 RFYGRIAKDAKRHDEATLVAVKDNAAGLSRISGERIWTELQKIVVGNFGSDLLLEMNRCH 299
Query: 749 LLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNG 792
L L E L K EK F K P M+G
Sbjct: 300 LFEHIGLPGKPNLEEFDRLCKALEK------FEKPHYPILYMSG 337
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM +P DID AT ATP QMK MF +E+VR N GEKHGT+ R+NDKENFEV
Sbjct: 101 AVRDILMNMEPKDIDLATTATPSQMKEMFEKEEVRMINANGEKHGTITPRINDKENFEVT 160
Query: 435 PVK 437
++
Sbjct: 161 TLR 163
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRID+ TDGRHAEV +T DW+LDANRRDLT+NSMFLG+
Sbjct: 159 VTTLRIDIRTDGRHAEVVYTTDWQLDANRRDLTINSMFLGL 199
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + H E L A+K N GL ISGERIWTEL KI+ G+F +++L+M +
Sbjct: 240 RFYGRIAKDAKRHDEATLVAVKDNAAGLSRISGERIWTELQKIVVGNFGSDLLLEMNRCH 299
Query: 857 MFPHLG 862
+F H+G
Sbjct: 300 LFEHIG 305
>gi|158287947|ref|XP_309824.4| AGAP010877-PA [Anopheles gambiae str. PEST]
gi|157019433|gb|EAA05527.4| AGAP010877-PA [Anopheles gambiae str. PEST]
Length = 533
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G++++S ES+SHWQQNDYK FSPSTDWDTVDF +PAIQ +PV SAIC P + +++E
Sbjct: 364 GRIVVSRAESSSHWQQNDYKSFSPSTDWDTVDFKSAPAIQNMPVTSAICTPASGETVQVE 423
Query: 308 -NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+ + V+GYAWSGGG IVRVD+T D G+TW VA + RHW W+LW A IP
Sbjct: 424 KDGYVTVRGYAWSGGGSEIVRVDLTADGGKTWTVAKLDESEKGTGPGRHWSWSLWTAKIP 483
Query: 367 VDPKTKEVSIMDML 380
V PK + + ++++
Sbjct: 484 V-PKGQRGASLEIV 496
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 89/130 (68%), Gaps = 2/130 (1%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP Y++ +I H + IWV + GVYDIT FV HPG + +M AAGG+I+PFW ++
Sbjct: 66 LPEYTMDEIVKHNGPSAGIWVTYGVGVYDITSFVPKHPGSDKVMLAAGGAIDPFWHIFQQ 125
Query: 80 HLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPS 139
H EV LLESYRIGN+ +D ++ KD+ DP+ EP R P+LK + KP+NAEPP S
Sbjct: 126 HNTKEVLTLLESYRIGNLRADDV-VSTKDL-HDPWSAEPKRHPILKPATQKPFNAEPPAS 183
Query: 140 MLVENFLTPS 149
+LV++FLTP+
Sbjct: 184 VLVDSFLTPN 193
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 12/86 (13%)
Query: 445 AVGNATWTGARLVDVLKAAGISPDQ----SLDSADV------QHVHVEIWSKAVDSSYNT 494
A G TWT A+L + K G P + SL +A + + +EI SKAVDS+YNT
Sbjct: 449 ADGGKTWTVAKLDESEKGTG--PGRHWSWSLWTAKIPVPKGQRGASLEIVSKAVDSNYNT 506
Query: 495 QPESFANIWNLRGVLSNAYHRVRVEI 520
QPESFANIWNLRGV+ NAY RV+V +
Sbjct: 507 QPESFANIWNLRGVVGNAYSRVKVNV 532
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
+C E EVKP+KGL WG +AVGNA WTGARL DVL+ G+
Sbjct: 245 MCGGNRRSEMMEVKPIKGLPWGASAVGNAQWTGARLCDVLRDMGV 289
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 188 GNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
GN+ +D ++ KD+ DP+ EP R P+LK + KP+NAEPP S+L S L
Sbjct: 141 GNLRADDV-VSTKDL-HDPWSAEPKRHPILKPATQKPFNAEPPASVLVDSFL 190
>gi|195452400|ref|XP_002073337.1| GK14077 [Drosophila willistoni]
gi|194169422|gb|EDW84323.1| GK14077 [Drosophila willistoni]
Length = 477
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 127/241 (52%), Gaps = 59/241 (24%)
Query: 573 KLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTAKVLSYRNRR------------ 620
K+DSPEFHS FTPEL++L +F+K+ ++LRIAG G V ++S + +
Sbjct: 63 KVDSPEFHSIFTPELEQLVSLFKKYNFELRIAG-GAVRDILMSIKPKDIDLATTATPDQM 121
Query: 621 ----EKED----------------RIGENQPFRKLTLSVQ------------------DK 642
KED RI + F TL + D
Sbjct: 122 KEMFTKEDVRMINAKGEKHGTITPRINNKENFEVTTLRIDVRTDGRHADVVFTTDWQLDA 181
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R DGTVYDYF G+EDL++ FVGD RI+EDYLR+LRYFRF+ RI
Sbjct: 182 NRRDLTINSMFLGFDGTVYDYFYGYEDLQERRIRFVGDANIRIKEDYLRVLRYFRFYGRI 241
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSK 754
N+ N+H E L A+K+N GL ISGERIW+EL KI+ G++ +E++L+M LL +
Sbjct: 242 ANDANSHDTETLLAVKDNAAGLGRISGERIWSELQKIVVGNYGRELLLEMNRCQLLEYCG 301
Query: 755 L 755
L
Sbjct: 302 L 302
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM KP DID AT ATPDQMK MF +E VR N KGEKHGT+ R+N+KENFEV
Sbjct: 97 AVRDILMSIKPKDIDLATTATPDQMKEMFTKEDVRMINAKGEKHGTITPRINNKENFEVT 156
Query: 435 PVK 437
++
Sbjct: 157 TLR 159
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 37/40 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLRIDV TDGRHA+V FT DW+LDANRRDLT+NSMFLG
Sbjct: 155 VTTLRIDVRTDGRHADVVFTTDWQLDANRRDLTINSMFLG 194
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI N+ N+H E L A+K N GL ISGERIW+EL KI+ G++ +E++L+M
Sbjct: 236 RFYGRIANDANSHDTETLLAVKDNAAGLGRISGERIWSELQKIVVGNYGRELLLEMNRCQ 295
Query: 857 MFPHLGTDETFATLDFEGL 875
+ + G +FE L
Sbjct: 296 LLEYCGLPSHPELQEFERL 314
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIR 796
YQ L L + R+Y+ +L+KY K EL + W P+FP+NGN ++
Sbjct: 378 YQKLCL----QPYAKRDYVEQLLKYSNKLELHRQLKSWATPSFPINGNTLK 424
>gi|312380992|gb|EFR26848.1| hypothetical protein AND_06793 [Anopheles darlingi]
Length = 352
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 84/127 (66%), Gaps = 2/127 (1%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G++++S ES SHWQQNDYK FSPSTDWDTVDF +PAIQ +P+ SAIC+P L
Sbjct: 183 GRIVVSRDESGSHWQQNDYKSFSPSTDWDTVDFKSAPAIQNMPITSAICVPANGETLAAA 242
Query: 308 NHQ--MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATI 365
+ V+GYAWSGGG I+RVD+T D G+TW VAN + RHW WTLW A I
Sbjct: 243 TKDGFVTVKGYAWSGGGSEIIRVDLTADGGKTWIVANLDESEQGTGPGRHWSWTLWTAQI 302
Query: 366 PVDPKTK 372
PV P K
Sbjct: 303 PVRPGQK 309
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 477 QHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
Q +EIWSKAVDS+YNTQPE+F+NIWNLRGV+ NAY RV+V +
Sbjct: 308 QKGPIEIWSKAVDSNYNTQPETFSNIWNLRGVVGNAYSRVKVTL 351
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
+C E E+KP+KGL WG +AVGNA W+GARL DVL AAG+ D + HV
Sbjct: 64 MCGGNRRSEMMEIKPIKGLPWGASAVGNAEWSGARLRDVLLAAGVR-----DGEEEGHVQ 118
Query: 481 VE 482
E
Sbjct: 119 FE 120
>gi|147900973|ref|NP_001089975.1| sulfite oxidase [Xenopus laevis]
gi|50415570|gb|AAH77584.1| MGC83835 protein [Xenopus laevis]
Length = 568
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 96/134 (71%), Gaps = 2/134 (1%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
S+ P YS D++ H L+ +WV + V+DITEFV++HPGG I+ AAGG++EPFWA+Y
Sbjct: 96 SSFPLYSKQDVRKHASLEDRVWVTYAGEVFDITEFVELHPGGSRILLAAGGALEPFWALY 155
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
GVH + V E+L+ Y++G ++ + K D+ SDPY EP+R P+LK S+KP+NAEPP
Sbjct: 156 GVHKNEHVLEILKEYKVGELNSAE-KDEPVDV-SDPYSQEPIRHPVLKVNSMKPFNAEPP 213
Query: 138 PSMLVENFLTPSLL 151
P ML E+F+TP+ L
Sbjct: 214 PYMLTESFITPTEL 227
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 103/160 (64%), Gaps = 16/160 (10%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GK+++S ES+SHWQQNDYKGF+P DWD VDFA SPAIQ+LPV SAI P ++
Sbjct: 401 GKIVVSKEESSSHWQQNDYKGFNPCVDWDNVDFASSPAIQDLPVQSAITEPHPGQEVTPN 460
Query: 308 -NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQ---DSQAPLTRHWGWTLWRA 363
+ ++ V+GYAWSGGG+ IVRVDV++D G+TW VA TG+ D QA W W LW+
Sbjct: 461 IDGELTVKGYAWSGGGREIVRVDVSVDGGKTWKVAELTGEQQKDGQA-----WAWKLWQL 515
Query: 364 TIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+P+ PK+ + +I+ +D + N PD + ++
Sbjct: 516 NVPLPPKSCDFTIICKA-------VDSSYNVQPDTVAPIW 548
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%)
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
I KAVDSSYN QP++ A IWNLRGVL+NA+HRV V +
Sbjct: 528 IICKAVDSSYNVQPDTVAPIWNLRGVLNNAWHRVHVTV 565
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 174 KHSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSM 233
+H E LK KV N +++D + D+ SDPY EP+R P+LK S+KP+NAEPPP M
Sbjct: 161 EHVLEILKEYKVGELNSAEKDEPV---DV-SDPYSQEPIRHPVLKVNSMKPFNAEPPPYM 216
Query: 234 LYSSLL 239
L S +
Sbjct: 217 LTESFI 222
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA E VKPVKGL W A+ A W GARL DVL AG + DS HVH
Sbjct: 282 CAGNRRSEMSAVKPVKGLEWTTGAISTAHWAGARLRDVLLEAGYTE----DSTQTLHVHF 337
Query: 482 E 482
E
Sbjct: 338 E 338
>gi|307166915|gb|EFN60819.1| tRNA-nucleotidyltransferase 1, mitochondrial [Camponotus
floridanus]
Length = 478
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 122/231 (52%), Gaps = 57/231 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQ------------------------------- 600
MKLD PEFHS FTPEL+ LA +F+K+ Y+
Sbjct: 55 MKLDCPEFHSVFTPELQTLANLFKKYNYELRIAGGAVRDILMSKQPKDLDFATDATPQQM 114
Query: 601 --------LRIAGE-----GTVTAKVLSYRNRREKEDRI--------GENQPFRKLTLSV 639
+R+ E GT+TA++ N RI + + + L
Sbjct: 115 KEMFTKEEIRMINEKGEKHGTITARINDKENFEITTLRIDVLTNGRHAQVEFTKDWKLDA 174
Query: 640 QDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+D + LDGT+YDYF G++DL++ FVGD +RI+EDYLRILRYFRF+ RI
Sbjct: 175 NRRDLTINSMFLDLDGTLYDYFYGYDDLQRKRVVFVGDADTRIREDYLRILRYFRFYGRI 234
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
++P+ H E + A+K N+DGL ISGERIW+E NKIL G+F+ E+ LK+L
Sbjct: 235 MDSPDKHDEATIKALKENIDGLSQISGERIWSEWNKILMGNFALELTLKLL 285
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM K+P D+DFAT+ATP QMK MF +E++R NEKGEKHGT+ AR+NDKENFE+
Sbjct: 90 AVRDILMSKQPKDLDFATDATPQQMKEMFTKEEIRMINEKGEKHGTITARINDKENFEIT 149
Query: 435 PVK--GLTWG-HAAV 446
++ LT G HA V
Sbjct: 150 TLRIDVLTNGRHAQV 164
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI ++P+ H E + A+K+N+DGL ISGERIW+E NKIL G+F+ E+ LK+LE
Sbjct: 229 RFYGRIMDSPDKHDEATIKALKENIDGLSQISGERIWSEWNKILMGNFALELTLKLLECG 288
Query: 857 MFPHLGTDETFATLDFEGLFR 877
H+G E +F +++
Sbjct: 289 ASKHIGLPEEPVVENFRIVYQ 309
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 39/41 (95%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV T+GRHA+V+FT+DWKLDANRRDLT+NSMFL +
Sbjct: 148 ITTLRIDVLTNGRHAQVEFTKDWKLDANRRDLTINSMFLDL 188
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 746 YQNLLLF-SKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ L+L S + REY+ E+++Y+ EL+ + +W++P FP+NGN++++
Sbjct: 370 YQQLILIQSTGRYEIYREYVKEVLRYRGAMELLDEVEQWKIPKFPINGNMMKE 422
>gi|328793093|ref|XP_397254.4| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like,
partial [Apis mellifera]
Length = 400
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 120/234 (51%), Gaps = 57/234 (24%)
Query: 573 KLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGT------------------------ 608
KLD+P FHS FTPEL LA +F+K+ Y+L+IAG
Sbjct: 17 KLDNPLFHSIFTPELNILAELFKKYNYELKIAGGAVRDILMDIKPLDLDFATDATPEEMK 76
Query: 609 ---VTAKVLSYRNRREKED----RIGENQPFRKLTLSVQDKD----------RSFRLD-- 649
V V NR E+ RI + Q F TL + + ++LD
Sbjct: 77 TMFVKENVRMINNRGERHGTITARINDKQNFEITTLRIDTHTDGRYAKIKFTKDWKLDAL 136
Query: 650 --------------GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
G +YDYF G++DL+K FVG+P RI+EDYLRILRYFRF+ RI
Sbjct: 137 RRDLTINSMFLDFEGKIYDYFFGYDDLQKRRVVFVGNPSHRIKEDYLRILRYFRFYGRIA 196
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL 749
P+ H E + AIK N+ GL ISGERIW+E +KIL G+++KE+ LKML N+
Sbjct: 197 EQPDVHDESTIIAIKENIHGLQRISGERIWSEWSKILSGNYAKELTLKMLKCNI 250
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM KP D+DFAT+ATP++MK MF +E VR N +GE+HGT+ AR+NDK+NFE+
Sbjct: 51 AVRDILMDIKPLDLDFATDATPEEMKTMFVKENVRMINNRGERHGTITARINDKQNFEIT 110
Query: 435 PVKGLTWGHAAVGNATWTGARLVDVLK 461
++ T +T +D L+
Sbjct: 111 TLRIDTHTDGRYAKIKFTKDWKLDALR 137
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 49/70 (70%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P+ H E + AIK+N+ GL ISGERIW+E +KIL G+++KE+ LKML+ N
Sbjct: 190 RFYGRIAEQPDVHDESTIIAIKENIHGLQRISGERIWSEWSKILSGNYAKELTLKMLKCN 249
Query: 857 MFPHLGTDET 866
+ ++G E
Sbjct: 250 IARYVGLPEN 259
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLRID TDGR+A+++FT+DWKLDA RRDLT+NSMFL
Sbjct: 109 ITTLRIDTHTDGRYAKIKFTKDWKLDALRRDLTINSMFL 147
>gi|195059417|ref|XP_001995633.1| GH17659 [Drosophila grimshawi]
gi|193896419|gb|EDV95285.1| GH17659 [Drosophila grimshawi]
Length = 592
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 105/156 (67%), Gaps = 7/156 (4%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE- 307
+++++D ES SHWQQNDYKGFSPSTDWDTVDF+ + AIQ +PV SAIC P+ + ++K++
Sbjct: 424 RIVVTDSESDSHWQQNDYKGFSPSTDWDTVDFSLAQAIQAMPVTSAICTPMPEERVKVDK 483
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ + V+GYAWSGGG+ I RVD+T D G+TWHVA + P RH+GW+LW A +P+
Sbjct: 484 DGCITVRGYAWSGGGRRIERVDLTSDAGKTWHVAQL--EQENLPDGRHYGWSLWTARLPI 541
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
++ M++ +D + N P+ + ++
Sbjct: 542 SADQQKEQHMEIWAKA----VDSSYNVQPEAFENIW 573
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 6/136 (4%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP YS+ D+ H +S IW+ + GVYD+TEF HPGG+ I+ AAG +I+PFWA+Y
Sbjct: 120 LPTYSVEDVLRHNTPESRIWITYGLGVYDVTEFAPNHPGGDKILMAAGNAIDPFWAIYQQ 179
Query: 80 HLQDEVFELLESYRIGNISQ----EDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
H +V +LLE++RIGN+++ D + D P+ EP R LLK S +P+NAE
Sbjct: 180 HNTLQVLQLLETFRIGNLNKIGAINDDDVG--DELGSPWAQEPKRHALLKPASKRPFNAE 237
Query: 136 PPPSMLVENFLTPSLL 151
PP ML + F TP+ L
Sbjct: 238 PPIGMLADKFYTPNEL 253
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Query: 473 SADVQ-HVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
SAD Q H+EIW+KAVDSSYN QPE+F NIWNLRGVL+NAYH+V+V++
Sbjct: 542 SADQQKEQHMEIWAKAVDSSYNVQPEAFENIWNLRGVLANAYHKVKVKL 590
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 409 RTFN----EKGEKH----GTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVL 460
RTFN +K KH +C E +KPVKGL+WG AVGNA W+GARL DVL
Sbjct: 285 RTFNLDDIQKMPKHTVTAAIMCGGNRRSEMTRIKPVKGLSWGPGAVGNAKWSGARLCDVL 344
Query: 461 KAAGISPDQSL 471
+A G+ PD+ L
Sbjct: 345 QAQGVQPDERL 355
>gi|148238096|ref|NP_001089198.1| uncharacterized protein LOC734244 [Xenopus laevis]
gi|50417559|gb|AAH77573.1| MGC83566 protein [Xenopus laevis]
Length = 568
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 104/157 (66%), Gaps = 10/157 (6%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GK+++S ES+SHWQ+NDYKGF+P DWD VDFA SP+IQ+LPV SAI P K+ +
Sbjct: 401 GKIVVSKEESSSHWQKNDYKGFNPCVDWDNVDFASSPSIQDLPVQSAITEPHPGQKITPD 460
Query: 308 -NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+ ++ V+GYAWSGGG+ IVRVDV++D G+TW VA TG+ +A + W W LW+ +P
Sbjct: 461 IDGELTVKGYAWSGGGREIVRVDVSVDGGKTWKVAELTGEKQKA--GQAWAWKLWQLNVP 518
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ K+ +V+I+ +D + N PD + ++
Sbjct: 519 LPTKSSDVTII-------CKAVDSSYNVQPDTVAPIW 548
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 91/134 (67%), Gaps = 2/134 (1%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
S+ P YS D++ H ++ +WV + V+DITEF+++HPGG I+ AAGG++EPFWA+Y
Sbjct: 96 SSSPLYSKEDVRKHASIEDRVWVTYAGEVFDITEFIELHPGGSRILLAAGGALEPFWALY 155
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
GVH + V E+L+ Y++G ++ + + SDPY +P R P+LK SLKP+NAEPP
Sbjct: 156 GVHKNEHVLEILKEYKVGELNSAEKDEPVDE--SDPYSQDPSRHPVLKVNSLKPFNAEPP 213
Query: 138 PSMLVENFLTPSLL 151
P ML EN +T + L
Sbjct: 214 PYMLTENSITQTEL 227
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 447 GNATWTGARLVDVLKAAGISPDQSLDSADV----QHVHVEIWSKAVDSSYNTQPESFANI 502
G TW A L + AG + L +V + V I KAVDSSYN QP++ A I
Sbjct: 488 GGKTWKVAELTGEKQKAGQAWAWKLWQLNVPLPTKSSDVTIICKAVDSSYNVQPDTVAPI 547
Query: 503 WNLRGVLSNAYHRVRVEI 520
WNLRGVL+NA+HRV V +
Sbjct: 548 WNLRGVLNNAWHRVCVTV 565
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 174 KHSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSM 233
+H E LK KV N +++D + SDPY +P R P+LK SLKP+NAEPPP M
Sbjct: 161 EHVLEILKEYKVGELNSAEKDEPVDE----SDPYSQDPSRHPVLKVNSLKPFNAEPPPYM 216
Query: 234 L 234
L
Sbjct: 217 L 217
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 389 DFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGN 448
D N T +KA F + ++ + CA E EVK VKGL W A+
Sbjct: 257 DKPLNLTLSDLKAKFPKHEITATLQ--------CAGNRRSEMSEVKLVKGLDWNIGAIST 308
Query: 449 ATWTGARLVDVLKAAGISPDQSLDSADVQHVHVE 482
A W GARL DVL AG + S+ QHVH E
Sbjct: 309 ARWAGARLRDVLLEAGYAE----GSSQTQHVHFE 338
>gi|390365238|ref|XP_787015.3| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 477
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 119/238 (50%), Gaps = 57/238 (23%)
Query: 564 FKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG------------------ 605
F+ KMK+DSPEF FTPELK+LA +FEK+ Y+LRIAG
Sbjct: 59 FRYYSSAKMKIDSPEFRGLFTPELKQLAELFEKYQYELRIAGGAVRDLLTKKQPQDVDFA 118
Query: 606 --------------------------EGTVTAKV--------LSYRNRREKEDRIGENQP 631
GT+TA++ + R R + R E +
Sbjct: 119 TIATPDQMKEMFTKEGIRMINAKGEKHGTITARINDKENFEITTLRIDRVTDGRHAEVEF 178
Query: 632 FRKLTLSVQDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILR 686
+ +D + LDGT+YD+FNG E L++ AFVG+ +RIQEDYLRILR
Sbjct: 179 TTDWRTDAERRDLTINSMFLGLDGTLYDFFNGKEALERCHVAFVGNAATRIQEDYLRILR 238
Query: 687 YFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
YFRF+ RI N H E L AI+ N GL ISGERIW E+ KIL G+F+ +++ M
Sbjct: 239 YFRFYGRIARESNKHTPETLQAIRENGHGLAGISGERIWMEVRKILTGNFAADLIHCM 296
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L K+P D+DFAT ATPDQMK MF +E +R N KGEKHGT+ AR+NDKENFE+
Sbjct: 102 AVRDLLTKKQPQDVDFATIATPDQMKEMFTKEGIRMINAKGEKHGTITARINDKENFEIT 161
Query: 435 PVK 437
++
Sbjct: 162 TLR 164
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID TDGRHAEV+FT DW+ DA RRDLT+NSMFLG+
Sbjct: 160 ITTLRIDRVTDGRHAEVEFTTDWRTDAERRDLTINSMFLGL 200
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI N H E L AI++N GL ISGERIW E+ KIL G+F+ +++ M +++
Sbjct: 241 RFYGRIARESNKHTPETLQAIRENGHGLAGISGERIWMEVRKILTGNFAADLIHCMYDLD 300
Query: 857 MFPHLG 862
+ H+G
Sbjct: 301 LARHIG 306
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNG 792
YQ++++ SK K + +Y+ E++KY+ +S+++ DF W + FP++G
Sbjct: 380 YQDIVVCSKEK--NIIKYVSEVLKYRGESQMLVDFRSWDVAKFPLSG 424
>gi|390365242|ref|XP_784774.3| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 395
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 121/243 (49%), Gaps = 57/243 (23%)
Query: 559 PHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG------------- 605
P S F+ KMK+DSPEF FTPELK+LA +FE++ Y+LRIAG
Sbjct: 54 PVSTCFRYFSSAKMKIDSPEFRGLFTPELKQLAELFERYQYELRIAGGAVRDLLTKKQPQ 113
Query: 606 -------------------------------EGTVTAKV--------LSYRNRREKEDRI 626
GT+TA++ + R R + R
Sbjct: 114 DVDFATIATPDQMKEMFTKEGIRMINAKGEKHGTITARINDKENFEITTLRIDRVTDGRH 173
Query: 627 GENQPFRKLTLSVQDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDY 681
E + + +D + LDGT+YD+FNG E L++ AFVG+ +RIQEDY
Sbjct: 174 AEVEFTTDWRTDAERRDLTINSMFLGLDGTLYDFFNGKEALERCHIAFVGNAATRIQEDY 233
Query: 682 LRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMM 741
LRILRYFRF+ RI N H E L +I+ N GL ISGERIW E+ KIL G+F+ +++
Sbjct: 234 LRILRYFRFYGRIARESNKHTPETLQSIRENGHGLAGISGERIWMEVRKILTGNFAADLI 293
Query: 742 LKM 744
M
Sbjct: 294 HCM 296
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L K+P D+DFAT ATPDQMK MF +E +R N KGEKHGT+ AR+NDKENFE+
Sbjct: 102 AVRDLLTKKQPQDVDFATIATPDQMKEMFTKEGIRMINAKGEKHGTITARINDKENFEIT 161
Query: 435 PVK 437
++
Sbjct: 162 TLR 164
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID TDGRHAEV+FT DW+ DA RRDLT+NSMFLG+
Sbjct: 160 ITTLRIDRVTDGRHAEVEFTTDWRTDAERRDLTINSMFLGL 200
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI N H E L +I++N GL ISGERIW E+ KIL G+F+ +++ M +++
Sbjct: 241 RFYGRIARESNKHTPETLQSIRENGHGLAGISGERIWMEVRKILTGNFAADLIHCMYDLD 300
Query: 857 MFPHLG 862
+ H+G
Sbjct: 301 LARHIG 306
>gi|321473953|gb|EFX84919.1| hypothetical protein DAPPUDRAFT_46334 [Daphnia pulex]
Length = 515
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 102/155 (65%), Gaps = 12/155 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++ ++ +ES SHWQQNDYK F+PS+DWD VDF+ +PAIQE+PV S +C P ++L++
Sbjct: 353 RIEVARNESQSHWQQNDYKSFNPSSDWDKVDFSTAPAIQEMPVTSVVCDPQDGETVELKD 412
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
+++++GYAWSGGG+ +VRVD+++D G+TWHVA L+R W WT W+A +PV
Sbjct: 413 GKLKLKGYAWSGGGRGVVRVDISLDSGKTWHVAELL---DPVKLSRQWAWTRWQANLPVT 469
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
K EV + +D + N P+ M+ ++
Sbjct: 470 AKETEVWV---------RAVDASYNTQPEGMEHIW 495
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 95/151 (62%), Gaps = 3/151 (1%)
Query: 1 MEDGVK--ALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPG 58
+E+ VK S+ G + LP YS D+ H D + +WV ++ GVYDIT F++ HPG
Sbjct: 27 LENKVKEGTASEREPGSYVDGLPVYSSGDLAKHADESTGVWVSYKSGVYDITHFIKSHPG 86
Query: 59 GEIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEP 118
G I+ AG S+EPFW +Y +H Q LLE YRIGN+++ + A ++ SDPY +P
Sbjct: 87 GNKILLGAGVSVEPFWNLYAIHKQPNTLALLEEYRIGNLTKGEEADAMINM-SDPYANDP 145
Query: 119 VRSPLLKATSLKPYNAEPPPSMLVENFLTPS 149
R P+L + KP+NAE P S+LVENF+TP+
Sbjct: 146 QRHPVLTIRTKKPFNAETPTSLLVENFITPT 176
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 420 TVCARMNDKENFEVK----PVKGLTWGHAAVG----------NATWTGARLVDVLKAA-G 464
+V D E E+K +KG W G TW A L+D +K +
Sbjct: 397 SVVCDPQDGETVELKDGKLKLKGYAWSGGGRGVVRVDISLDSGKTWHVAELLDPVKLSRQ 456
Query: 465 ISPDQSLDSADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ + + V E+W +AVD+SYNTQPE +IWN+RGVL+ YH+++V +
Sbjct: 457 WAWTRWQANLPVTAKETEVWVRAVDASYNTQPEGMEHIWNMRGVLAVGYHKIKVSL 512
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 397 DQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARL 456
DQ+K +A V + C+ E KP KGL W A+GNA W G RL
Sbjct: 215 DQLKTAYASHSVTASLQ--------CSGNRRSEMNRTKPTKGLEWAQGAMGNAVWKGVRL 266
Query: 457 VDVLKAAGISPDQSLDSADVQHVHVEI 483
DVL GI DS + +H HVE
Sbjct: 267 RDVLLDLGIK-----DSDENEHWHVEF 288
>gi|380011481|ref|XP_003689831.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Apis florea]
Length = 373
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 121/242 (50%), Gaps = 58/242 (23%)
Query: 565 KSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGT---------------- 608
+S P K KLD+ FHS FTPEL LA +F+K+ Y+L+IAG
Sbjct: 10 RSNPVIK-KLDNTLFHSIFTPELNILAQLFKKYNYELKIAGGAVRDILMDIKPLDLDFAT 68
Query: 609 -----------VTAKVLSYRNRREKED----RIGENQPFRKLTLSVQD------------ 641
V V NR EK RI + Q F TL +
Sbjct: 69 DATPEEMKTMFVKENVRMINNRGEKHGTITARINDKQNFEITTLRIDMHTDGRYAKVKFT 128
Query: 642 ---KDRSFRLD-----------GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
K + R D G +YDYF G++DL+K FVG+P RI+EDYLRILRY
Sbjct: 129 KDWKSDALRRDLTINSMFLDFEGKIYDYFFGYDDLQKRRVVFVGNPACRIKEDYLRILRY 188
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF+ RI P+ H E + IK N+ GL ISGERIW+E +KIL G+++KE+ LKML
Sbjct: 189 FRFYGRIAEQPDAHDESTIIVIKENIHGLQRISGERIWSEWSKILSGNYAKELTLKMLEC 248
Query: 748 NL 749
N+
Sbjct: 249 NI 250
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 50/63 (79%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM KP D+DFAT+ATP++MK MF +E VR N +GEKHGT+ AR+NDK+NFE+
Sbjct: 51 AVRDILMDIKPLDLDFATDATPEEMKTMFVKENVRMINNRGEKHGTITARINDKQNFEIT 110
Query: 435 PVK 437
++
Sbjct: 111 TLR 113
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P+ H E + IK+N+ GL ISGERIW+E +KIL G+++KE+ LKMLE N
Sbjct: 190 RFYGRIAEQPDAHDESTIIVIKENIHGLQRISGERIWSEWSKILSGNYAKELTLKMLECN 249
Query: 857 MFPHLGTDE 865
+ ++G E
Sbjct: 250 IARYVGFPE 258
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLRID+ TDGR+A+V+FT+DWK DA RRDLT+NSMFL
Sbjct: 109 ITTLRIDMHTDGRYAKVKFTKDWKSDALRRDLTINSMFL 147
>gi|383849531|ref|XP_003700398.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Megachile rotundata]
Length = 433
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 123/238 (51%), Gaps = 58/238 (24%)
Query: 566 SGPDGKMK-LDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG------------------- 605
S PD +K LD+P FHS FTPEL LA +F+K Y+LRIAG
Sbjct: 9 SRPDPVIKKLDNPIFHSLFTPELNILAELFKKRNYELRIAGGAVRDILMGIKPADLDFAT 68
Query: 606 -------------------------EGTVTAKV--------LSYRNRREKEDRIGENQPF 632
GT+T+++ + R +E R + +
Sbjct: 69 DATPQEMKRMFEEESVRVLNTNGEKHGTITSRINDKENFEITTLRIDKETNGRHAQVEFT 128
Query: 633 RKLTLSVQDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
+ L +D + L+G +YDYF G++DL+K FVG+ RI+EDY+RILRY
Sbjct: 129 KNWKLDALRRDLTINSMFLDLEGKIYDYFFGYDDLQKRKIVFVGNASQRIKEDYVRILRY 188
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
FRF+ RI P+ H EE ++AIK N+ GL +ISGERIW E +KIL G++ KE+ LKML
Sbjct: 189 FRFYGRIAEQPDLHDEETITAIKENIHGLQDISGERIWNEWSKILTGNYVKELTLKML 246
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG KP D+DFAT+ATP +MK MF EE VR N GEKHGT+ +R+NDKENFE+
Sbjct: 51 AVRDILMGIKPADLDFATDATPQEMKRMFEEESVRVLNTNGEKHGTITSRINDKENFEIT 110
Query: 435 PVK 437
++
Sbjct: 111 TLR 113
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P+ H EE ++AIK+N+ GL +ISGERIW E +KIL G++ KE+ LKMLE
Sbjct: 190 RFYGRIAEQPDLHDEETITAIKENIHGLQDISGERIWNEWSKILTGNYVKELTLKMLECG 249
Query: 857 MFPHLGTDETFATLDFEGLFRSMPIPFTLLFSANFFRNLARITTLRIDVTTDGRHAEVQF 916
+ ++G E +FE + + +L F + R ++ +Q
Sbjct: 250 IARYVGLPEDPNIKNFEDVCEASKKNNIVLRPITFLAMMLR-----------NQNEVIQL 298
Query: 917 TEDWKLDANRRDLT 930
KL A RDL
Sbjct: 299 HNRLKLSAFERDLA 312
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 38/42 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
ITTLRID T+GRHA+V+FT++WKLDA RRDLT+NSMFL ++
Sbjct: 109 ITTLRIDKETNGRHAQVEFTKNWKLDALRRDLTINSMFLDLE 150
>gi|350409365|ref|XP_003488709.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Bombus impatiens]
Length = 401
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 123/241 (51%), Gaps = 60/241 (24%)
Query: 563 RFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTAKVLSYR----- 617
R +S P K KLD+P FHS FTPEL LA +F K+ YQL++AG G V ++ +
Sbjct: 8 RSRSDPVVK-KLDNPLFHSIFTPELNTLAQLFRKYNYQLKLAG-GAVRDILMDIKPADLD 65
Query: 618 -----------------------NRREKE----DRIGENQPFRKLTLSVQDKD------- 643
N+ EK RI + + F TL +
Sbjct: 66 FATDATPEEMKIMFEKENIRMINNKGEKHGTITSRINDKENFEVTTLRIDTHTDGRHAKV 125
Query: 644 ---RSFRLD----------------GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRI 684
+ ++LD G +YDYF G++DL+K FVG+P RI+EDYLRI
Sbjct: 126 KFTKDWKLDALRRDLTINSMFLDFEGRIYDYFFGYDDLQKRRVVFVGNPTCRIKEDYLRI 185
Query: 685 LRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
RYFRF+ RI P+ H E + AIK N+ GL ISGERIW E +KIL G+++KE+ LK+
Sbjct: 186 FRYFRFYGRIAEQPDIHDESTIIAIKENIHGLEGISGERIWNEWSKILSGNYAKELTLKL 245
Query: 745 L 745
L
Sbjct: 246 L 246
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM KP D+DFAT+ATP++MK MF +E +R N KGEKHGT+ +R+NDKENFEV
Sbjct: 51 AVRDILMDIKPADLDFATDATPEEMKIMFEKENIRMINNKGEKHGTITSRINDKENFEVT 110
Query: 435 PVKGLTWGHAAVGNATWTGARLVDVLK 461
++ T +T +D L+
Sbjct: 111 TLRIDTHTDGRHAKVKFTKDWKLDALR 137
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P+ H E + AIK+N+ GL ISGERIW E +KIL G+++KE+ LK+LE
Sbjct: 190 RFYGRIAEQPDIHDESTIIAIKENIHGLEGISGERIWNEWSKILSGNYAKELTLKLLECG 249
Query: 857 MFPHLGTDETFATLDFEGLF 876
+ ++G E +FE ++
Sbjct: 250 ITRYVGLSENPNIKNFEIVY 269
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLRID TDGRHA+V+FT+DWKLDA RRDLT+NSMFL
Sbjct: 109 VTTLRIDTHTDGRHAKVKFTKDWKLDALRRDLTINSMFL 147
>gi|427789195|gb|JAA60049.1| Putative sulfite oxidase molybdopterin-binding component
[Rhipicephalus pulchellus]
Length = 559
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 98/155 (63%), Gaps = 9/155 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++ LS ES SHWQQNDYKGF PSTDWDTVDF +PAIQELP+ S +C P+ + +
Sbjct: 394 RIQLSPTESESHWQQNDYKGFCPSTDWDTVDFKSAPAIQELPITSVVCRPLEGDAVTPVD 453
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
+++V+GYAWSGGG+ +VRVDV+ D G+ W A +D+ L R W WTLW+ +PV
Sbjct: 454 GKIQVKGYAWSGGGRKVVRVDVSADGGKNWVPAQLESEDTS--LHRAWAWTLWKIDLPVP 511
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T ++ I+ +D + N+ P+ + ++
Sbjct: 512 KDTDKLEIVCKA-------VDSSYNSQPEGVAGVW 539
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Query: 5 VKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMK 64
V A + +A EP+ LP Y+ ++ H ++ IW+ F+ GVYD+T+FV HPGG+ I+
Sbjct: 78 VLAKQETKADEPVDNLPVYTAEEVAKHDRKETRIWISFKCGVYDVTDFVDEHPGGDKILL 137
Query: 65 AAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLL 124
AGG I+PFW +Y VH E+ LLE++RIGN++ +D A+ I DPY+++P R L
Sbjct: 138 GAGGGIDPFWNLYAVHKTPEILALLETFRIGNLAADDVGAASAGI-EDPYLLDPKRHRDL 196
Query: 125 KATSLKPYNAEPPPSMLVENFLTPSLLSQV 154
K S+KP+NAEPP + L +N+ TP+ L V
Sbjct: 197 KPASVKPFNAEPPLATLADNYRTPNELFYV 226
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 34/40 (85%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EI KAVDSSYN+QPE A +WNLRGVL+NA++RV VE+
Sbjct: 517 LEIVCKAVDSSYNSQPEGVAGVWNLRGVLNNAWYRVHVEV 556
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 20/116 (17%)
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMN 426
VDPK + I D K H++ T D++KA F + V + + CA
Sbjct: 235 VDPKHYVLEIEDP--DGKCHEL------TLDEIKAKFPKVSVTSVIQ--------CAGNR 278
Query: 427 DKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVE 482
E ++K VKGL WG A+GNATW+GARL+DVL+ G+ L +QH+ +E
Sbjct: 279 RSEQNKIKKVKGLDWGPCAIGNATWSGARLLDVLRYLGV----DLSDERIQHIVME 330
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 169 QLSSFKHSDEKLKLVKVM-AGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNA 227
L + + E L L++ GN++ +D A+ I DPY+++P R LK S+KP+NA
Sbjct: 148 NLYAVHKTPEILALLETFRIGNLAADDVGAASAGI-EDPYLLDPKRHRDLKPASVKPFNA 206
Query: 228 EPPPSML 234
EPP + L
Sbjct: 207 EPPLATL 213
>gi|294662392|pdb|3HBG|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant C185s
gi|294662393|pdb|3HBP|A Chain A, The Crystal Structure Of C185s Mutant Of Recombinant
Sulfite Oxidase With Bound Substrate, Sulfite, At The
Active Site
Length = 466
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 97/155 (62%), Gaps = 12/155 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V +S ES SHWQQNDYKGFSP DWDTVD+ +PAIQELPV SA+ P A +
Sbjct: 305 RVAVSPDESPSHWQQNDYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVP--P 362
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYAWSGGG+ +VRVDV++D GRTW VA G +AP R W W LW T+PV+
Sbjct: 363 GELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD--KAPPGRAWAWALWELTVPVE 420
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T E+ I+ +D + N PD + ++
Sbjct: 421 AGT-ELEIVCKA-------VDSSYNVQPDSVAPIW 447
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 90/134 (67%), Gaps = 3/134 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMY 77
+ P Y+ ++ H+ + +WV V+D+T+FV++HPGG + I+ AAGG++EPFWA+Y
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALY 62
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
VH + V ELL+ Y++G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP
Sbjct: 63 AVHGEPHVLELLQQYKVGELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPP 120
Query: 138 PSMLVENFLTPSLL 151
+L E FLTP+ L
Sbjct: 121 AELLAERFLTPNEL 134
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 436 VKGLTW---GHAAV-------GNATWTGARLVDVLKAAGISPDQSLDSADV---QHVHVE 482
VKG W G V G TW ARL+ G + +L V +E
Sbjct: 367 VKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELE 426
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
I KAVDSSYN QP+S A IWNLRGVLS A+HRVRV +
Sbjct: 427 IVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSV 464
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L+ KV G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP +L
Sbjct: 69 HVLELLQQYKV--GELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPPAELL 124
Query: 235 YSSLL 239
L
Sbjct: 125 AERFL 129
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 407 KVRTFNEKGEKHGTVCARMNDK-ENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
++R+ K E T+ + N + E V+PVKGL W A+ A W GARL DVL AG
Sbjct: 169 ELRSRFPKHEVTATLQSAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGF 228
>gi|289741975|gb|ADD19735.1| tRNA nucleotidyltransferase/poly polymerase A [Glossina morsitans
morsitans]
Length = 474
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 134/275 (48%), Gaps = 63/275 (22%)
Query: 573 KLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGT------VTAKVLSYRNRREKED-- 624
KL++PEF S FT ELK L IF K+ Y+LR+AG +T K + + E
Sbjct: 53 KLNTPEFRSIFTDELKTLVSIFSKYNYELRVAGGAVRDILMEITPKDVDFATTATPEQMK 112
Query: 625 -----------------------RIGENQPFRKLTLSVQ------------------DKD 643
RIG+ + F TL + D +
Sbjct: 113 EMFTLEKIRMINPKGEKHGTITVRIGDKENFEVTTLRIDVVTDGRHAEVQFTTDWQLDAN 172
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT+YDYF G+EDL++ FVGD +RI+ED+LRILRYFRF+ RI
Sbjct: 173 RRDLTINSMFLGFDGTLYDYFYGYEDLQQRRVKFVGDANTRIKEDFLRILRYFRFYGRIA 232
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKL 755
+ H E L AI+ N GL ISGERIW EL K+L G++S+E+ML+M+ L+++ L
Sbjct: 233 PEADRHDELTLKAIRANAHGLAKISGERIWGELQKMLLGNYSEEIMLEMINSGLVVYCGL 292
Query: 756 KATTMREYIVELMKYKEKSELIKDFHKWRLPTFPM 790
+R ++E +K +KDF K P M
Sbjct: 293 ---PLRPNVLE---FKRLCLALKDFEKPHKPILFM 321
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM P D+DFAT ATP+QMK MF EK+R N KGEKHGT+ R+ DKENFEV
Sbjct: 87 AVRDILMEITPKDVDFATTATPEQMKEMFTLEKIRMINPKGEKHGTITVRIGDKENFEVT 146
Query: 435 PVK 437
++
Sbjct: 147 TLR 149
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV TDGRHAEVQFT DW+LDANRRDLT+NSMFLG
Sbjct: 145 VTTLRIDVVTDGRHAEVQFTTDWQLDANRRDLTINSMFLGF 185
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + H E L AI+ N GL ISGERIW EL K+L G++S+E+ML+M+
Sbjct: 226 RFYGRIAPEADRHDELTLKAIRANAHGLAKISGERIWGELQKMLLGNYSEEIMLEMINSG 285
Query: 857 MFPHLGTDETFATLDFEGL 875
+ + G L+F+ L
Sbjct: 286 LVVYCGLPLRPNVLEFKRL 304
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIR 796
YQ L L +A R+++ EL+KYK K EL + W +P FP+NGNI++
Sbjct: 368 YQKLCL----QAYIRRDFVEELLKYKHKRELYDNLRSWEVPPFPVNGNILK 414
>gi|3212610|pdb|1SOX|A Chain A, Sulfite Oxidase From Chicken Liver
gi|3212611|pdb|1SOX|B Chain B, Sulfite Oxidase From Chicken Liver
Length = 466
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 97/155 (62%), Gaps = 12/155 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V +S ES SHWQQNDYKGFSP DWDTVD+ +PAIQELPV SA+ P A +
Sbjct: 305 RVAVSPDESPSHWQQNDYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVP--P 362
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYAWSGGG+ +VRVDV++D GRTW VA G +AP R W W LW T+PV+
Sbjct: 363 GELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD--KAPPGRAWAWALWELTVPVE 420
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T E+ I+ +D + N PD + ++
Sbjct: 421 AGT-ELEIVCKA-------VDSSYNVQPDSVAPIW 447
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 90/134 (67%), Gaps = 3/134 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMY 77
+ P Y+ ++ H+ + +WV V+D+T+FV++HPGG + I+ AAGG++EPFWA+Y
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALY 62
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
VH + V ELL+ Y++G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP
Sbjct: 63 AVHGEPHVLELLQQYKVGELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPP 120
Query: 138 PSMLVENFLTPSLL 151
+L E FLTP+ L
Sbjct: 121 AELLAERFLTPNEL 134
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 436 VKGLTW---GHAAV-------GNATWTGARLVDVLKAAGISPDQSLDSADV---QHVHVE 482
VKG W G V G TW ARL+ G + +L V +E
Sbjct: 367 VKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELE 426
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
I KAVDSSYN QP+S A IWNLRGVLS A+HRVRV +
Sbjct: 427 IVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSV 464
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 24/44 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
CA E V+PVKGL W A+ A W GARL DVL AG
Sbjct: 185 CAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGF 228
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L+ KV G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP +L
Sbjct: 69 HVLELLQQYKV--GELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPPAELL 124
Query: 235 YSSLL 239
L
Sbjct: 125 AERFL 129
>gi|73536180|pdb|2A9D|A Chain A, Crystal Structure Of Recombinant Chicken Sulfite Oxidase
With Arg At Residue 161
gi|73536181|pdb|2A9D|B Chain B, Crystal Structure Of Recombinant Chicken Sulfite Oxidase
With Arg At Residue 161
Length = 372
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 97/155 (62%), Gaps = 12/155 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V +S ES SHWQQNDYKGFSP DWDTVD+ +PAIQELPV SA+ P A +
Sbjct: 211 RVAVSPDESPSHWQQNDYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVP--P 268
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYAWSGGG+ +VRVDV++D GRTW VA G +AP R W W LW T+PV+
Sbjct: 269 GELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD--KAPPGRAWAWALWELTVPVE 326
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T E+ I+ +D + N PD + ++
Sbjct: 327 AGT-ELEIVCKA-------VDSSYNVQPDSVAPIW 353
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 436 VKGLTW---GHAAV-------GNATWTGARLVDVLKAAGISPDQSLDSADV---QHVHVE 482
VKG W G V G TW ARL+ G + +L V +E
Sbjct: 273 VKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELE 332
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
I KAVDSSYN QP+S A IWNLRGVLS A+HRVRV +
Sbjct: 333 IVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSV 370
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 112 DPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSLL 151
DP+ +P R P L+ S KP+NAEPP +L E FLTP+ L
Sbjct: 1 DPFAGDPPRHPGLRVNSQKPFNAEPPAELLAERFLTPNEL 40
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 24/44 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
CA E V+PVKGL W A+ A W GARL DVL AG
Sbjct: 91 CAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGF 134
>gi|294662394|pdb|3HBQ|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant Cys 185 Ala
Length = 466
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 97/155 (62%), Gaps = 12/155 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V +S ES SHWQQNDYKGFSP DWDTVD+ +PAIQELPV SA+ P A +
Sbjct: 305 RVAVSPDESPSHWQQNDYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVP--P 362
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYAWSGGG+ +VRVDV++D GRTW VA G +AP R W W LW T+PV+
Sbjct: 363 GELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD--KAPPGRAWAWALWELTVPVE 420
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T E+ I+ +D + N PD + ++
Sbjct: 421 AGT-ELEIVCKA-------VDSSYNVQPDSVAPIW 447
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 90/134 (67%), Gaps = 3/134 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMY 77
+ P Y+ ++ H+ + +WV V+D+T+FV++HPGG + I+ AAGG++EPFWA+Y
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALY 62
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
VH + V ELL+ Y++G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP
Sbjct: 63 AVHGEPHVLELLQQYKVGELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPP 120
Query: 138 PSMLVENFLTPSLL 151
+L E FLTP+ L
Sbjct: 121 AELLAERFLTPNEL 134
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 436 VKGLTW---GHAAV-------GNATWTGARLVDVLKAAGISPDQSLDSADV---QHVHVE 482
VKG W G V G TW ARL+ G + +L V +E
Sbjct: 367 VKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELE 426
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
I KAVDSSYN QP+S A IWNLRGVLS A+HRVRV +
Sbjct: 427 IVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSV 464
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 407 KVRTFNEKGEKHGTVCARMNDK-ENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
++R+ K E T+ A N + E V+PVKGL W A+ A W GARL DVL AG
Sbjct: 169 ELRSRFPKHEVTATLQAAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGF 228
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L+ KV G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP +L
Sbjct: 69 HVLELLQQYKV--GELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPPAELL 124
Query: 235 YSSLL 239
L
Sbjct: 125 AERFL 129
>gi|73536174|pdb|2A99|A Chain A, Crystal Structure Of Recombinant Chicken Sulfite Oxidase
At Resting State
gi|73536175|pdb|2A9A|A Chain A, Crystal Structure Of Recombinant Chicken Sulfite Oxidase
With The Bound Product, Sulfate, At The Active Site
gi|73536176|pdb|2A9A|B Chain B, Crystal Structure Of Recombinant Chicken Sulfite Oxidase
With The Bound Product, Sulfate, At The Active Site
Length = 372
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 97/155 (62%), Gaps = 12/155 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V +S ES SHWQQNDYKGFSP DWDTVD+ +PAIQELPV SA+ P A +
Sbjct: 211 RVAVSPDESPSHWQQNDYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVP--P 268
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYAWSGGG+ +VRVDV++D GRTW VA G +AP R W W LW T+PV+
Sbjct: 269 GELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD--KAPPGRAWAWALWELTVPVE 326
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T E+ I+ +D + N PD + ++
Sbjct: 327 AGT-ELEIVCKA-------VDSSYNVQPDSVAPIW 353
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 436 VKGLTW---GHAAV-------GNATWTGARLVDVLKAAGISPDQSLDSADV---QHVHVE 482
VKG W G V G TW ARL+ G + +L V +E
Sbjct: 273 VKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELE 332
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
I KAVDSSYN QP+S A IWNLRGVLS A+HRVRV +
Sbjct: 333 IVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSV 370
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 112 DPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSLL 151
DP+ +P R P L+ S KP+NAEPP +L E FLTP+ L
Sbjct: 1 DPFAGDPPRHPGLRVNSQKPFNAEPPAELLAERFLTPNEL 40
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 24/44 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
CA E V+PVKGL W A+ A W GARL DVL AG
Sbjct: 91 CAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGF 134
>gi|73536177|pdb|2A9B|A Chain A, Crystal Structure Of R138q Mutant Of Recombinant Sulfite
Oxidase At Resting State
gi|73536178|pdb|2A9C|A Chain A, Crystal Structure Of R138q Mutant Of Recombinant Chicken
Sulfite Oxidase With The Bound Product, Sulfate, At The
Active Site
gi|73536179|pdb|2A9C|B Chain B, Crystal Structure Of R138q Mutant Of Recombinant Chicken
Sulfite Oxidase With The Bound Product, Sulfate, At The
Active Site
Length = 372
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 97/155 (62%), Gaps = 12/155 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V +S ES SHWQQNDYKGFSP DWDTVD+ +PAIQELPV SA+ P A +
Sbjct: 211 RVAVSPDESPSHWQQNDYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVP--P 268
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYAWSGGG+ +VRVDV++D GRTW VA G +AP R W W LW T+PV+
Sbjct: 269 GELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD--KAPPGRAWAWALWELTVPVE 326
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T E+ I+ +D + N PD + ++
Sbjct: 327 AGT-ELEIVCKA-------VDSSYNVQPDSVAPIW 353
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 447 GNATWTGARLVDVLKAAGISPDQSLDSADV---QHVHVEIWSKAVDSSYNTQPESFANIW 503
G TW ARL+ G + +L V +EI KAVDSSYN QP+S A IW
Sbjct: 294 GGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYNVQPDSVAPIW 353
Query: 504 NLRGVLSNAYHRVRVEI 520
NLRGVLS A+HRVRV +
Sbjct: 354 NLRGVLSTAWHRVRVSV 370
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 112 DPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSLL 151
DP+ +P R P L+ S KP+NAEPP +L E FLTP+ L
Sbjct: 1 DPFAGDPPRHPGLRVNSQKPFNAEPPAELLAERFLTPNEL 40
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 24/44 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
CA E V+PVKGL W A+ A W GARL DVL AG
Sbjct: 91 CAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGF 134
>gi|270009743|gb|EFA06191.1| hypothetical protein TcasGA2_TC009040 [Tribolium castaneum]
Length = 425
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 121/231 (52%), Gaps = 57/231 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG---------------EGTVTAKVLSY 616
KLDSP+FHS FT ELK LA +F+++GY++RIAG + TA +
Sbjct: 13 FKLDSPDFHSLFTDELKTLASMFKRYGYEIRIAGGAVRDLLSGLRPTDLDFATTATPVQM 72
Query: 617 RNRREKED----------------RIGENQPFRKLTLS---VQDKDR------------S 645
+ E+ RI + + F TL V D R +
Sbjct: 73 KEMFTAENVRMINMNGEKHGTITPRINDKENFEVTTLRIDVVTDGRRAEVQFTTDWLLDA 132
Query: 646 FRLDGT-----------VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
R D T VYDYF G+EDLK FVGD +RI+EDYLRILRYFRF+ RI
Sbjct: 133 LRRDLTINSMFLDFEGAVYDYFYGYEDLKVHKVQFVGDAATRIKEDYLRILRYFRFYGRI 192
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
+ H+E L+AI+ N +GL NISGERIW EL KIL G+F+ ++++K++
Sbjct: 193 AKEADKHEEGTLNAIRENKEGLGNISGERIWMELRKILEGNFAGDLLIKII 243
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G +P D+DFAT ATP QMK MF E VR N GEKHGT+ R+NDKENFEV
Sbjct: 48 AVRDLLSGLRPTDLDFATTATPVQMKEMFTAENVRMINMNGEKHGTITPRINDKENFEVT 107
Query: 435 PVKGLTWGHAAVGNATWTGARLVDVLK 461
++ +T L+D L+
Sbjct: 108 TLRIDVVTDGRRAEVQFTTDWLLDALR 134
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/39 (82%), Positives = 34/39 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLRIDV TDGR AEVQFT DW LDA RRDLT+NSMFL
Sbjct: 106 VTTLRIDVVTDGRRAEVQFTTDWLLDALRRDLTINSMFL 144
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 49/69 (71%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + H+E L+AI++N +GL NISGERIW EL KIL G+F+ ++++K+++
Sbjct: 187 RFYGRIAKEADKHEEGTLNAIRENKEGLGNISGERIWMELRKILEGNFAGDLLIKIIDCG 246
Query: 857 MFPHLGTDE 865
+ ++G E
Sbjct: 247 LSSYIGLPE 255
Score = 40.4 bits (93), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 744 MLYQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
M YQ L+L K+ + +Y+VE++KY L ++F W +P FP+ GN++++
Sbjct: 324 MPYQQLVL--KINNKNVFQYVVEVLKYINSPHL-EEFQNWTIPKFPVTGNMLKE 374
>gi|260805881|ref|XP_002597814.1| hypothetical protein BRAFLDRAFT_243026 [Branchiostoma floridae]
gi|229283082|gb|EEN53826.1| hypothetical protein BRAFLDRAFT_243026 [Branchiostoma floridae]
Length = 481
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 96/157 (61%), Gaps = 11/157 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
KV S ES SHWQQNDYKGF+P DWD+VDF KSPAIQE PV SAIC P D + +
Sbjct: 309 KVWASPDESPSHWQQNDYKGFAPQVDWDSVDFKKSPAIQEYPVQSAICEP-KDGTVWDDE 367
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV- 367
++ V+GYA+SGGG+ I+RVDV+ D G+TWH + +Q R W WTLW A++P+
Sbjct: 368 EEVTVKGYAYSGGGREIIRVDVSADGGKTWHPTELVAKPNQG-YNRTWAWTLWEASVPLP 426
Query: 368 -DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
D K K+V + +D A N P+ K +
Sbjct: 427 KDAKGKKVELCAKA-------VDSAYNTQPESFKPYW 456
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 95/136 (69%), Gaps = 5/136 (3%)
Query: 21 PWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGV 79
P +SLS++ HK +W+ ++ GVYDITEF++ HPGG IM AAGGS+EPFWAMY V
Sbjct: 1 PEFSLSEVAKHKTKNERVWITYKSGVYDITEFLESHPGGASKIMLAAGGSVEPFWAMYAV 60
Query: 80 HLQD-EVFELLESYRIGNISQED---SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
H ++ EVFELLE RIGNIS++D + K +DP+ EP R P L +S KP+NAE
Sbjct: 61 HKENPEVFELLEPLRIGNISKKDLIEMQQTKKADPNDPFASEPGRHPALAPSSKKPFNAE 120
Query: 136 PPPSMLVENFLTPSLL 151
PP +LV+N++TP+ L
Sbjct: 121 PPQELLVDNYITPNEL 136
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 475 DVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
D + VE+ +KAVDS+YNTQPESF WNLRGV++NA+HRV + +
Sbjct: 428 DAKGKKVELCAKAVDSAYNTQPESFKPYWNLRGVVANAWHRVHITV 473
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA EVK +KGL+WG AA+ NA WTG L D+L G+S + + +++HV
Sbjct: 187 CAGNRRSNMMEVKKIKGLSWGIAAISNAEWTGVYLSDILAHVGLSDPE--NRGELKHVQF 244
Query: 482 E 482
E
Sbjct: 245 E 245
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 188 GNISQED---SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
GNIS++D + K +DP+ EP R P L +S KP+NAEPP +L + +
Sbjct: 77 GNISKKDLIEMQQTKKADPNDPFASEPGRHPALAPSSKKPFNAEPPQELLVDNYI 131
>gi|298508305|pdb|3HC2|A Chain A, Crystal Structure Of Chicken Sulfite Oxidase Mutant Tyr
322 Phe
Length = 466
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 97/155 (62%), Gaps = 12/155 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V +S ES SHWQQND+KGFSP DWDTVD+ +PAIQELPV SA+ P A +
Sbjct: 305 RVAVSPDESPSHWQQNDFKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVP--P 362
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYAWSGGG+ +VRVDV++D GRTW VA G +AP R W W LW T+PV+
Sbjct: 363 GELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD--KAPPGRAWAWALWELTVPVE 420
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T E+ I+ +D + N PD + ++
Sbjct: 421 AGT-ELEIVCKA-------VDSSYNVQPDSVAPIW 447
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 90/134 (67%), Gaps = 3/134 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMY 77
+ P Y+ ++ H+ + +WV V+D+T+FV++HPGG + I+ AAGG++EPFWA+Y
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALY 62
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
VH + V ELL+ Y++G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP
Sbjct: 63 AVHGEPHVLELLQQYKVGELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPP 120
Query: 138 PSMLVENFLTPSLL 151
+L E FLTP+ L
Sbjct: 121 AELLAERFLTPNEL 134
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 436 VKGLTW---GHAAV-------GNATWTGARLVDVLKAAGISPDQSLDSADV---QHVHVE 482
VKG W G V G TW ARL+ G + +L V +E
Sbjct: 367 VKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELE 426
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
I KAVDSSYN QP+S A IWNLRGVLS A+HRVRV +
Sbjct: 427 IVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSV 464
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 24/44 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
CA E V+PVKGL W A+ A W GARL DVL AG
Sbjct: 185 CAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGF 228
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L+ KV G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP +L
Sbjct: 69 HVLELLQQYKV--GELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPPAELL 124
Query: 235 YSSLL 239
L
Sbjct: 125 AERFL 129
>gi|194212242|ref|XP_001491902.2| PREDICTED: sulfite oxidase, mitochondrial [Equus caballus]
Length = 547
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 99/156 (63%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV ++ ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P A +E
Sbjct: 382 GKVSVASEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEPKDGA--TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ Q P + W W LW PV
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEE-QCP-RKAWAWRLWELQAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ ID + N PD M ++
Sbjct: 498 PAGQKELNIVCKA-------IDDSYNVQPDTMAPIW 526
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++++H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTREEVRSHSSPETRIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V E+L Y+IG +S ED K + SDPY +P+R P LK S +P+NAEPPP +L
Sbjct: 145 QSHVREILAQYKIGELSPED-KAPSTLKTSDPYADDPIRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KA+D SYN QP++ A IWNLRGVLSNA+HR+ V +
Sbjct: 504 LNIVCKAIDDSYNVQPDTMAPIWNLRGVLSNAWHRIHVHV 543
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
L + G +S ED K + SDPY +P+R P LK S +P+NAEPPP +L
Sbjct: 152 LAQYKIGELSPED-KAPSTLKTSDPYADDPIRHPALKVNSQRPFNAEPPPELL 203
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK V+GL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVRGLEWSIGAISTARWAGARLCDVLAQAG 306
>gi|427793311|gb|JAA62107.1| Putative sulfite oxidase molybdopterin-binding component, partial
[Rhipicephalus pulchellus]
Length = 501
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Query: 5 VKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMK 64
V A + +A EP+ LP Y+ ++ H ++ IW+ F+ GVYD+T+FV HPGG+ I+
Sbjct: 36 VLAKQETKADEPVDNLPVYTAEEVAKHDRKETRIWISFKCGVYDVTDFVDEHPGGDKILL 95
Query: 65 AAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLL 124
AGG I+PFW +Y VH E+ LLE++RIGN++ +D A+ I DPY+++P R L
Sbjct: 96 GAGGGIDPFWNLYAVHKTPEILALLETFRIGNLAADDVGAASAGI-EDPYLLDPKRHRDL 154
Query: 125 KATSLKPYNAEPPPSMLVENFLTPSLLSQV 154
K S+KP+NAEPP + L +N+ TP+ L V
Sbjct: 155 KPASVKPFNAEPPLATLADNYRTPNELFYV 184
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 77/111 (69%), Gaps = 2/111 (1%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++ LS ES SHWQQNDYKGF PSTDWDTVDF +PAIQELP+ S +C P+ + +
Sbjct: 354 RIQLSPTESESHWQQNDYKGFCPSTDWDTVDFKSAPAIQELPITSVVCRPLEGDAVTPVD 413
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
+++V+GYAWSGGG+ +VRVDV+ D G+ W A +D+ L R W WT
Sbjct: 414 GKIQVKGYAWSGGGRKVVRVDVSADGGKNWVPAQLESEDTS--LHRAWAWT 462
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 429 ENFEVKPVKGLTWGHAAVGNATWTGARL----VDVLKAAGIS--PDQSLDSADVQHVHVE 482
E V PV G V W+G VDV G + P Q L+S D
Sbjct: 405 EGDAVTPVDG----KIQVKGYAWSGGGRKVVRVDVSADGGKNWVPAQ-LESEDTSLHRAW 459
Query: 483 IWS-KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
W+ KAVDSSYN+QPE A +WNLRGVL+NA++RV VE+
Sbjct: 460 AWTXKAVDSSYNSQPEGVAGVWNLRGVLNNAWYRVHVEV 498
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 20/116 (17%)
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMN 426
VDPK + I D K H++ T D++KA F + V + + CA
Sbjct: 193 VDPKHYVLEIEDP--DGKCHEL------TLDEIKAKFPKVSVTSVIQ--------CAGNR 236
Query: 427 DKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVE 482
E ++K VKGL WG A+GNATW+GARL+DVL+ G+ L +QH+ +E
Sbjct: 237 RSEQNKIKKVKGLDWGPCAIGNATWSGARLLDVLRYLGV----DLSDERIQHIVME 288
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 169 QLSSFKHSDEKLKLVKVM-AGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNA 227
L + + E L L++ GN++ +D A+ I DPY+++P R LK S+KP+NA
Sbjct: 106 NLYAVHKTPEILALLETFRIGNLAADDVGAASAGI-EDPYLLDPKRHRDLKPASVKPFNA 164
Query: 228 EPPPSML 234
EPP + L
Sbjct: 165 EPPLATL 171
>gi|405978194|gb|EKC42604.1| Putative sulfite oxidase, mitochondrial [Crassostrea gigas]
Length = 1766
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 99/148 (66%), Gaps = 3/148 (2%)
Query: 4 GVKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIM 63
G+ A S+ AG LP YSL ++ H ++ IWV ++ GVYDIT++V HPGG I+
Sbjct: 47 GITAQSE-SAGSLKKGLPTYSLEEVAKHNKKENRIWVTYKNGVYDITDYVSNHPGGSRIL 105
Query: 64 KAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPL 123
AAG SIEP+W MY H Q+E++E+LE RIGNI+ E SK KD +SDPY +P R
Sbjct: 106 LAAGSSIEPYWEMYAAHKQEEIYEMLEELRIGNIT-EKSKDEQKD-SSDPYANDPKRHVA 163
Query: 124 LKATSLKPYNAEPPPSMLVENFLTPSLL 151
LK +S KP+NAEPP S+L ++LTP+ L
Sbjct: 164 LKPSSSKPFNAEPPLSLLRHSYLTPNDL 191
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 94/155 (60%), Gaps = 9/155 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
K+ LSD EST HWQQ DYKGF S DW VDF P I ELPV S IC P A + L+ ++
Sbjct: 363 KITLSDKESTCHWQQKDYKGFHSSIDWHNVDFTSVPPIYELPVQSVICEPEAGSILE-DD 421
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYAWSGGG+ IVRVD++ D G+TWH A + ++ PL + + WT W TIP+
Sbjct: 422 EEVTVKGYAWSGGGRGIVRVDLSADGGKTWHSAELS--PTEQPLYKTYAWTFWEGTIPL- 478
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
PK + + + D A N PD ++ ++
Sbjct: 479 PKDHKGDVEIVCKAA-----DTAYNVQPDNVEGIW 508
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 405 EEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
E+ R FN+K CA E +KPVKGL WG AA+ NA+W GA L DVLK AG
Sbjct: 226 EDLKRKFNKKSVVSIVQCAGNRRSEMVTIKPVKGLNWGAAAISNASWAGACLDDVLKRAG 285
Query: 465 ISPDQSLDSADVQHV 479
I +++ D +H+
Sbjct: 286 I----DIETVDAKHI 296
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 175 HSDEKL--KLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPS 232
H E++ L ++ GNI+ E SK KD +SDPY +P R LK +S KP+NAEPP S
Sbjct: 122 HKQEEIYEMLEELRIGNIT-EKSKDEQKD-SSDPYANDPKRHVALKPSSSKPFNAEPPLS 179
Query: 233 MLYSSLL 239
+L S L
Sbjct: 180 LLRHSYL 186
>gi|195055207|ref|XP_001994511.1| GH15807 [Drosophila grimshawi]
gi|193892274|gb|EDV91140.1| GH15807 [Drosophila grimshawi]
Length = 457
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 120/242 (49%), Gaps = 57/242 (23%)
Query: 573 KLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG---------------EGTVTAKVLSYR 617
K+DS EF S FTPEL+ L +F+K+ Y+LRIAG + TA +
Sbjct: 35 KVDSDEFRSIFTPELETLVALFKKYNYELRIAGGAVRDILMKIKPKDVDFATTATPEQMK 94
Query: 618 NRREKED----------------RIGENQPFRKLTLSVQ------------------DKD 643
KED RI + + F TL + D +
Sbjct: 95 EMFTKEDVRMINAKGEKHGTITPRINDMENFEVTTLRIDVRTDGRHADVVFTTNWQLDAN 154
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R LDGTVYDYF G++D+++ FVGD RI+EDYLRILRYFRF+ RI
Sbjct: 155 RRDLTINSMFLGLDGTVYDYFYGYDDVQRRRIIFVGDADVRIKEDYLRILRYFRFYGRIA 214
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKL 755
+PN+H L+AIK N GL IS ER+W EL KI+ G+F +E++L+M LL L
Sbjct: 215 ADPNSHDPATLAAIKANGAGLARISSERVWAELRKIIAGNFGRELVLEMYNCGLLEHCGL 274
Query: 756 KA 757
A
Sbjct: 275 PA 276
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM KP D+DFAT ATP+QMK MF +E VR N KGEKHGT+ R+ND ENFEV
Sbjct: 69 AVRDILMKIKPKDVDFATTATPEQMKEMFTKEDVRMINAKGEKHGTITPRINDMENFEVT 128
Query: 435 PVK 437
++
Sbjct: 129 TLR 131
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV TDGRHA+V FT +W+LDANRRDLT+NSMFLG+
Sbjct: 127 VTTLRIDVRTDGRHADVVFTTNWQLDANRRDLTINSMFLGL 167
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI +PN+H L+AIK N GL IS ER+W EL KI+ G+F +E++L+M
Sbjct: 208 RFYGRIAADPNSHDPATLAAIKANGAGLARISSERVWAELRKIIAGNFGRELVLEMYNCG 267
Query: 857 MFPHLGTDETFATLDFEGLFRSM 879
+ H G +FE L S
Sbjct: 268 LLEHCGLPAQPNISEFERLCNSF 290
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 691 FARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML----- 745
F R+CN+ +EE I LH E K+ ++ +++ L +
Sbjct: 283 FERLCNSFKRFEEESHHPILYMCGLLHTTEQAMQLHERLKL--SAYERDLALFITQQRHR 340
Query: 746 ----YQNLLLFSKL--KATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQF 798
Y++L KL + R+Y+ L+KY K EL + W++P FP+ GN++ +
Sbjct: 341 IDNEYKSLRDCQKLCLQPYAKRDYVEHLLKYANKLELYQQLKAWQIPNFPIKGNMLSSY 399
>gi|28558813|sp|P07850.3|SUOX_CHICK RecName: Full=Sulfite oxidase
Length = 459
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 96/155 (61%), Gaps = 12/155 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V +S ES S WQQNDYKGFSP DWDTVD+ +PAIQELPV SA+ P A +
Sbjct: 305 RVAVSPDESPSRWQQNDYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVP--P 362
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYAWSGGG+ +VRVDV++D GRTW VA G +AP R W W LW T+PV+
Sbjct: 363 GELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD--KAPPGRAWAWALWELTVPVE 420
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T E+ I+ +D + N PD + ++
Sbjct: 421 AGT-ELEIVCKA-------VDSSYNVQPDSVAPIW 447
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 90/134 (67%), Gaps = 3/134 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMY 77
+ P Y+ ++ H+ + +WV V+D+T+FV++HPGG + I+ AAGG++EPFWA+Y
Sbjct: 3 SYPRYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALY 62
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
VH + V ELL+ Y++G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP
Sbjct: 63 AVHGEPHVLELLQQYKVGELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPP 120
Query: 138 PSMLVENFLTPSLL 151
+L E FLTP+ L
Sbjct: 121 AELLAERFLTPNEL 134
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 436 VKGLTW---GHAAV-------GNATWTGARLVDVLKAAGISPDQSLDSADV---QHVHVE 482
VKG W G V G TW ARL+ G + +L V +E
Sbjct: 367 VKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELE 426
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHR 515
I KAVDSSYN QP+S A IWNLRGVLS A+HR
Sbjct: 427 IVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHR 459
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L+ KV G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP +L
Sbjct: 69 HVLELLQQYKV--GELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPPAELL 124
Query: 235 YSSLL 239
L
Sbjct: 125 AERFL 129
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 23/44 (52%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
CA E V+PVKGL W A+ A W GA L DVL AG
Sbjct: 185 CAGNRRSEMSRVRPVKGLPWDIGAISTARWGGASLRDVLLHAGF 228
>gi|395540569|ref|XP_003772225.1| PREDICTED: sulfite oxidase, mitochondrial, partial [Sarcophilus
harrisii]
Length = 490
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 96/156 (61%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV +S ES SHWQ+ DYKGFSPS DWDTVDF +PAIQELPV S I P +E
Sbjct: 327 GKVSISSEESPSHWQRRDYKGFSPSVDWDTVDFDSAPAIQELPVQSVITEPREGQ--TIE 384
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
++ V+GYAWSGGG+AI+RVDV++D G TW VA G+ +QAP R W W LW T V
Sbjct: 385 PGEVTVKGYAWSGGGRAIIRVDVSLDGGLTWQVATLEGE-AQAP-RRAWAWRLWHLTASV 442
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P K ++I+ +D N PD + ++
Sbjct: 443 PPGKKGLNIICKA-------VDDGYNVQPDTVAPIW 471
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 91/134 (67%), Gaps = 2/134 (1%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMY 77
+LP Y+ +++ H+ L+ +WV V+D+T+FV +HPGG +M AAGG +EPFWA+Y
Sbjct: 26 SLPMYTKAEVSYHRSLEKRVWVTLGNEVFDVTDFVAIHPGGPSKLMLAAGGPLEPFWALY 85
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
VH Q V ELL Y+IG +S ++ K ++ +++DP+ +P R P L+ S KP+NAEPP
Sbjct: 86 AVHNQPHVRELLAQYKIGELSPDEEK-SSDLVSTDPFANDPPRHPALQINSQKPFNAEPP 144
Query: 138 PSMLVENFLTPSLL 151
+L E+++TP+ L
Sbjct: 145 LELLGESYITPNPL 158
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V++
Sbjct: 449 LNIICKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVQV 488
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISP 467
CA E ++K VKGL WG A+ A W GARL DVL AG SP
Sbjct: 209 CAGNRRSEMAQIKSVKGLNWGAGAISTAQWGGARLRDVLIQAGHSP 254
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G +S ++ K ++ +++DP+ +P R P L+ S KP+NAEPP +L
Sbjct: 92 HVRELLAQYKI--GELSPDEEK-SSDLVSTDPFANDPPRHPALQINSQKPFNAEPPLELL 148
Query: 235 YSSLL 239
S +
Sbjct: 149 GESYI 153
>gi|374977589|pdb|3R19|A Chain A, Chicken Sulfite Oxidase Triple Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 96/155 (61%), Gaps = 12/155 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V +S ES SHWQQND KGFSP DWDTVD+ +PAIQELPV SA+ P A +
Sbjct: 305 RVAVSPDESPSHWQQNDNKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVP--P 362
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYAWSGGG+ +VRVDV++D GRTW VA G +AP R W W LW T+PV+
Sbjct: 363 GELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD--KAPPGRAWAWALWELTVPVE 420
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T E+ I+ +D + N PD + ++
Sbjct: 421 AGT-ELEIVCKA-------VDSSYNVQPDSVAPIW 447
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 90/134 (67%), Gaps = 3/134 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMY 77
+ P Y+ ++ H+ + +WV V+D+T+FV++HPGG + I+ AAGG++EPFWA+Y
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALY 62
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
VH + V ELL+ Y++G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP
Sbjct: 63 AVHGEPHVLELLQQYKVGELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPP 120
Query: 138 PSMLVENFLTPSLL 151
+L E FLTP+ L
Sbjct: 121 AELLAERFLTPNEL 134
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 436 VKGLTW---GHAAV-------GNATWTGARLVDVLKAAGISPDQSLDSADV---QHVHVE 482
VKG W G V G TW ARL+ G + +L V +E
Sbjct: 367 VKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELE 426
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
I KAVDSSYN QP+S A IWNL G+LS A+HRVRV +
Sbjct: 427 IVCKAVDSSYNVQPDSVAPIWNLMGMLSTAWHRVRVSV 464
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 24/44 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
CA E V+PVKGL W A+ A W GARL DVL AG
Sbjct: 185 CAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGF 228
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L+ KV G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP +L
Sbjct: 69 HVLELLQQYKV--GELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPPAELL 124
Query: 235 YSSLL 239
L
Sbjct: 125 AERFL 129
>gi|374977588|pdb|3R18|A Chain A, Chicken Sulfite Oxidase Double Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 96/155 (61%), Gaps = 12/155 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V +S ES SHWQQND KGFSP DWDTVD+ +PAIQELPV SA+ P A +
Sbjct: 305 RVAVSPDESPSHWQQNDNKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVP--P 362
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYAWSGGG+ +VRVDV++D GRTW VA G +AP R W W LW T+PV+
Sbjct: 363 GELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD--KAPPGRAWAWALWELTVPVE 420
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T E+ I+ +D + N PD + ++
Sbjct: 421 AGT-ELEIVCKA-------VDSSYNVQPDSVAPIW 447
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 90/134 (67%), Gaps = 3/134 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMY 77
+ P Y+ ++ H+ + +WV V+D+T+FV++HPGG + I+ AAGG++EPFWA+Y
Sbjct: 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALY 62
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
VH + V ELL+ Y++G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP
Sbjct: 63 AVHGEPHVLELLQQYKVGELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPP 120
Query: 138 PSMLVENFLTPSLL 151
+L E FLTP+ L
Sbjct: 121 AELLAERFLTPNEL 134
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 436 VKGLTW---GHAAV-------GNATWTGARLVDVLKAAGISPDQSLDSADV---QHVHVE 482
VKG W G V G TW ARL+ G + +L V +E
Sbjct: 367 VKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELE 426
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
I KAVDSSYN QP+S A IWNL GVLS A+HRVRV +
Sbjct: 427 IVCKAVDSSYNVQPDSVAPIWNLMGVLSTAWHRVRVSV 464
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 24/44 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
CA E V+PVKGL W A+ A W GARL DVL AG
Sbjct: 185 CAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGF 228
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L+ KV G +S +++ AA D A DP+ +P R P L+ S KP+NAEPP +L
Sbjct: 69 HVLELLQQYKV--GELSPDEAP-AAPD-AQDPFAGDPPRHPGLRVNSQKPFNAEPPAELL 124
Query: 235 YSSLL 239
L
Sbjct: 125 AERFL 129
>gi|347968155|ref|XP_312336.5| AGAP002600-PA [Anopheles gambiae str. PEST]
gi|333468137|gb|EAA08067.5| AGAP002600-PA [Anopheles gambiae str. PEST]
Length = 428
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 117/241 (48%), Gaps = 58/241 (24%)
Query: 563 RFKSGPDGKMK-LDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEG-------------- 607
R S PD +K +DSPEF S FT ELK L +FE++ +++R+AG
Sbjct: 4 RAISRPDPVVKKIDSPEFRSIFTQELKDLIALFERYNFEIRVAGGAVRDILMNMNPKDVD 63
Query: 608 -------TVTAKVLSYRNRR------EKED----RIGENQPFRKLTLSVQ---------- 640
T ++ + N R EK RI + + F TL +
Sbjct: 64 IATTATPTEMKEIFTKENIRMVNMNGEKHGTITPRINDRENFEITTLRIDAITDGRHAEV 123
Query: 641 --------DKDRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRI 684
D +R DGT+YDYF G+EDL+K AFVGDP RI+EDYLRI
Sbjct: 124 IHTTDWLLDANRRDLTINSMFLGFDGTLYDYFYGYEDLQKRRVAFVGDPDMRIKEDYLRI 183
Query: 685 LRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
LRYFRF+ RI N H EE L I N +GL ISGERIW E KIL G+F E+ M
Sbjct: 184 LRYFRFYGRIAEESNRHDEETLRIITKNAEGLARISGERIWQEWKKILSGNFGIELTEAM 243
Query: 745 L 745
+
Sbjct: 244 I 244
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM P D+D AT ATP +MK +F +E +R N GEKHGT+ R+ND+ENFE+
Sbjct: 49 AVRDILMNMNPKDVDIATTATPTEMKEIFTKENIRMVNMNGEKHGTITPRINDRENFEIT 108
Query: 435 PVK--GLTWG-HAAVGNAT 450
++ +T G HA V + T
Sbjct: 109 TLRIDAITDGRHAEVIHTT 127
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 34/40 (85%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
ITTLRID TDGRHAEV T DW LDANRRDLT+NSMFLG
Sbjct: 107 ITTLRIDAITDGRHAEVIHTTDWLLDANRRDLTINSMFLG 146
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI N H EE L I KN +GL ISGERIW E KIL G+F E+ M+
Sbjct: 188 RFYGRIAEESNRHDEETLRIITKNAEGLARISGERIWQEWKKILSGNFGIELTEAMINCQ 247
Query: 857 MFPHLG 862
+ PH+G
Sbjct: 248 LAPHMG 253
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 680 DYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKE 739
++LR+ + R F +P VLSA+ N + N++ +T + L ++
Sbjct: 262 EFLRVAKQVRSF-----DPKLQPITVLSALLNTPEDAVNLNMRLKFTVYERELCYFITQN 316
Query: 740 MMLKMLYQNLLLFSKLKATTM------REYIVELMKYKEKSELIKDFHKWRLPTFPMNGN 793
LL F +L T+ +EY++EL+KY K EL + W +P FP+ GN
Sbjct: 317 REETATIDELLPFQQLCLQTISSVKLKKEYVLELLKYHGKRELYQQLLDWPIPQFPIKGN 376
Query: 794 II 795
++
Sbjct: 377 VL 378
>gi|198425189|ref|XP_002125613.1| PREDICTED: similar to Sulfite oxidase, mitochondrial [Ciona
intestinalis]
Length = 552
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 93/143 (65%), Gaps = 4/143 (2%)
Query: 235 YSSLLRIPFCSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISA 294
Y + + SH V + ESTSHWQ NDYKGFSP+T ++T D+ +P+IQE+PVISA
Sbjct: 373 YVGARNVKWLSH---VTVGAEESTSHWQMNDYKGFSPNTTFETADYKNTPSIQEMPVISA 429
Query: 295 ICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTR 354
I +P A+ + E+ +EV+GYAWSGGG+ I+RVDV+ D G+TW A T + A +
Sbjct: 430 ISVPKANTIVDPEDGMVEVKGYAWSGGGRDIIRVDVSPDGGKTWKEATLTKDEPNADDSS 489
Query: 355 H-WGWTLWRATIPVDPKTKEVSI 376
H W WTLWRA +PV E++
Sbjct: 490 HCWSWTLWRAEVPVKTGQTEITC 512
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYG 78
+ P YS +I H + IWV ++ GVYDITEFV HPGGE I+ A+GG I+PFW MY
Sbjct: 83 SFPVYSSQEIMKHTTKDNGIWVSYKDGVYDITEFVDSHPGGEKILLASGGPIDPFWNMYA 142
Query: 79 VHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPP 138
VH +EV E+LE Y+IG +S ED D+ +DP+ EP R P+ + S KP+NAEPP
Sbjct: 143 VHKSEEVLEILEQYKIGILSPEDQVQKPIDL-NDPFAKEPARLPVFRINSKKPFNAEPPL 201
Query: 139 SMLVENFLTPSLLSQV 154
+L ++++TP+ L V
Sbjct: 202 ELLTDSYITPNDLFYV 217
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 476 VQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
V+ EI KA+DSSYN QPE IWNLRG L+NA+HRV+V +
Sbjct: 503 VKTGQTEITCKAIDSSYNCQPEWIGPIWNLRGFLTNAWHRVKVTV 547
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA +E E K VKGL+WG A+G A WTG R+ D+L AG ++ ++H+H
Sbjct: 264 CAGNRREEMSEFKTVKGLSWGPCAIGTARWTGVRVRDILLHAGY----DVEDKAIKHIH 318
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 176 SDEKLKLV-KVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
S+E L+++ + G +S ED D+ +DP+ EP R P+ + S KP+NAEPP +L
Sbjct: 146 SEEVLEILEQYKIGILSPEDQVQKPIDL-NDPFAKEPARLPVFRINSKKPFNAEPPLELL 204
Query: 235 YSSLL 239
S +
Sbjct: 205 TDSYI 209
>gi|324511430|gb|ADY44759.1| tRNA-nucleotidyltransferase 1 [Ascaris suum]
Length = 494
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 114/232 (49%), Gaps = 59/232 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTAKVLSYR-------------- 617
MKLDS EF S FTPELK+L +F + +QLR+AG G V ++ R
Sbjct: 42 MKLDSEEFRSLFTPELKKLNDLFIANKFQLRMAG-GAVRDLLMGLRPADIDFASDATPSQ 100
Query: 618 -------------NRREKED-----RIGENQPFRKLTLSVQ------------------D 641
N+ +E RI + + F TL + D
Sbjct: 101 MKELFTREGIRMLNKNGEEHGTITCRIDDKENFEITTLRIDVVCDGRRAKVEFTTDWQLD 160
Query: 642 KDRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFAR 693
+R LDGTV DYF G EDL+ AFVGD RIQEDYLRILRYFRFF R
Sbjct: 161 ANRRDLTINSLFLELDGTVIDYFGGIEDLRARRVAFVGDATQRIQEDYLRILRYFRFFGR 220
Query: 694 ICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
I + + H++ L AI NN GL NISGERIW+EL KI G F +++ M+
Sbjct: 221 IAKSGDAHEQTTLDAIINNKQGLMNISGERIWSELKKICVGRFGGDVLTTMV 272
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG +P DIDFA++ATP QMK +F E +R N+ GE+HGT+ R++DKENFE+
Sbjct: 77 AVRDLLMGLRPADIDFASDATPSQMKELFTREGIRMLNKNGEEHGTITCRIDDKENFEIT 136
Query: 435 PVK 437
++
Sbjct: 137 TLR 139
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV DGR A+V+FT DW+LDANRRDLT+NS+FL +
Sbjct: 135 ITTLRIDVVCDGRRAKVEFTTDWQLDANRRDLTINSLFLEL 175
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 853
+FF RI + + H++ L AI N GL NISGERIW+EL KI G F +++ M+
Sbjct: 216 RFFGRIAKSGDAHEQTTLDAIINNKQGLMNISGERIWSELKKICVGRFGGDVLTTMV 272
>gi|195568543|ref|XP_002102273.1| GD19587 [Drosophila simulans]
gi|194198200|gb|EDX11776.1| GD19587 [Drosophila simulans]
Length = 476
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 126/260 (48%), Gaps = 63/260 (24%)
Query: 553 LTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGT---- 608
L +PP R ++ P + K+ +PEF S FTPEL L +F+K+ Y+LRIAG
Sbjct: 47 LGKPP-----RMRTNPAFR-KVATPEFQSIFTPELNDLLALFKKYDYELRIAGGAVRDIL 100
Query: 609 -----------VTAKVLSYRNRREKED----------------RIGENQPFRKLTLSVQ- 640
TA + EKE+ RI + + F TL +
Sbjct: 101 MGIPPKDIDLATTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVTTLRIDI 160
Query: 641 -----------------DKDRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVS 675
D +R DGTVYDYF G++DL++ FVG+
Sbjct: 161 RTDGRHAEVMYTTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYDDLQERRVVFVGEADI 220
Query: 676 RIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
RI+ED+LRILRYFRF+ RI + NNH + L+AIK N GL ISGERIW+EL KI+ G+
Sbjct: 221 RIKEDFLRILRYFRFYGRIASEENNHDKATLAAIKENAKGLARISGERIWSELQKIVAGN 280
Query: 736 FSKEMMLKMLYQNLLLFSKL 755
F + L+M NL + L
Sbjct: 281 FGPALFLEMHCCNLFEYIGL 300
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG P DID AT ATPDQMK MF +E+VR N GEKHGT+ R+NDKENFEV
Sbjct: 95 AVRDILMGIPPKDIDLATTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVT 154
Query: 435 PVK 437
++
Sbjct: 155 TLR 157
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRID+ TDGRHAEV +T DW+LDANRRDLT+NSMFLG
Sbjct: 153 VTTLRIDIRTDGRHAEVMYTTDWQLDANRRDLTINSMFLGF 193
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + NNH + L+AIK+N GL ISGERIW+EL KI+ G+F + L+M N
Sbjct: 234 RFYGRIASEENNHDKATLAAIKENAKGLARISGERIWSELQKIVAGNFGPALFLEMHCCN 293
Query: 857 MFPHLGTDETFATLDFEGLFRSM 879
+F ++G + +F+ L +++
Sbjct: 294 LFEYIGLPKEPNLDEFDRLCKAL 316
>gi|114644306|ref|XP_509129.2| PREDICTED: sulfite oxidase, mitochondrial isoform 4 [Pan
troglodytes]
gi|114644308|ref|XP_001169705.1| PREDICTED: sulfite oxidase, mitochondrial isoform 3 [Pan
troglodytes]
gi|114644310|ref|XP_001169687.1| PREDICTED: sulfite oxidase, mitochondrial isoform 2 [Pan
troglodytes]
gi|332839008|ref|XP_003313650.1| PREDICTED: sulfite oxidase, mitochondrial [Pan troglodytes]
gi|332839010|ref|XP_003313651.1| PREDICTED: sulfite oxidase, mitochondrial [Pan troglodytes]
gi|397509144|ref|XP_003824996.1| PREDICTED: sulfite oxidase, mitochondrial isoform 1 [Pan paniscus]
gi|397509146|ref|XP_003824997.1| PREDICTED: sulfite oxidase, mitochondrial isoform 2 [Pan paniscus]
gi|397509148|ref|XP_003824998.1| PREDICTED: sulfite oxidase, mitochondrial isoform 3 [Pan paniscus]
gi|410220778|gb|JAA07608.1| sulfite oxidase [Pan troglodytes]
gi|410247034|gb|JAA11484.1| sulfite oxidase [Pan troglodytes]
gi|410303556|gb|JAA30378.1| sulfite oxidase [Pan troglodytes]
gi|410330301|gb|JAA34097.1| sulfite oxidase [Pan troglodytes]
gi|410330303|gb|JAA34098.1| sulfite oxidase [Pan troglodytes]
Length = 545
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 99/156 (63%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWCLWQLKAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P KE++I+ +D N PD + ++
Sbjct: 498 PPGQKELNIVCKA-------VDDGYNVQPDTVAPIW 526
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 504 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVYV 543
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 306
>gi|344267490|ref|XP_003405599.1| PREDICTED: sulfite oxidase, mitochondrial-like [Loxodonta africana]
Length = 728
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 99/156 (63%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELP+ SAI P D + +E
Sbjct: 565 GKVSVEPEESYSHWQRRDYKGFSPSVDWDTVDFDLAPSIQELPIQSAITEP-RDGE-TIE 622
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ V+GYAWSGGG+A+VRVDV++D G TW VA G++ + + W W LWR PV
Sbjct: 623 SGEVTVKGYAWSGGGRAVVRVDVSLDGGLTWQVAELDGEEQRP--RKAWAWRLWRLQAPV 680
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 681 PAGQKELNIICKA-------VDDSYNVQPDTVAPIW 709
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H K+ IWV F V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 268 YTREEVSSHCSPKTGIWVTFGHEVFDVTEFVDLHPGGPAKLMLAAGGPLEPFWALYAVHN 327
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V E+L Y+IG ++ D K SDPY +P R P LK S +P+NAEPP +L
Sbjct: 328 QPHVREILAQYKIGELNPND-KAPPTLETSDPYAGDPPRHPALKVNSQRPFNAEPPTELL 386
Query: 142 VENFLTPSLL 151
EN++TP+ L
Sbjct: 387 TENYITPNPL 396
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVL+NA+HRV V +
Sbjct: 687 LNIICKAVDDSYNVQPDTVAPIWNLRGVLNNAWHRVHVYV 726
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 447 CAGNRRSEMTKVKEVKGLEWRAGAISTARWAGARLCDVLAQAG 489
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 204 SDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
SDPY +P R P LK S +P+NAEPP +L
Sbjct: 356 SDPYAGDPPRHPALKVNSQRPFNAEPPTELL 386
>gi|410964761|ref|XP_003988921.1| PREDICTED: sulfite oxidase, mitochondrial [Felis catus]
Length = 544
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 100/156 (64%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + ++
Sbjct: 381 GKVSVEPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-KDGE-TVQ 438
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A+VRVDV++D G TWHVA G++ + + W W LW+ PV
Sbjct: 439 SGEVTIKGYAWSGGGRAVVRVDVSLDGGLTWHVAELDGEEQRP--RKAWAWRLWQLQAPV 496
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 497 PAGRKELNIVCKA-------VDDSYNVQPDTVAPIW 525
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 87/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++++H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 84 YTREEVRSHSSPETRIWVTLGCEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 143
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V E+L Y+IG +S ED K + SDPY+ +PVR P LK S +P+NAEPPP +L
Sbjct: 144 QPHVREMLAQYKIGELSPED-KAPSTLKTSDPYIDDPVRHPALKVNSQRPFNAEPPPELL 202
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 203 TENYITPN 210
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+H V V +
Sbjct: 503 LNIVCKAVDDSYNVQPDTVAPIWNLRGVLSNAWHHVHVHV 542
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G +S ED K + SDPY+ +PVR P LK S +P+NAEPPP +L
Sbjct: 146 HVREMLAQYKI--GELSPED-KAPSTLKTSDPYIDDPVRHPALKVNSQRPFNAEPPPELL 202
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E + K V+GL W A+ A W GARL DVL AG
Sbjct: 263 CAGNRRSEMTQFKEVRGLEWNIGAISTARWAGARLCDVLAKAG 305
>gi|21357337|ref|NP_649578.1| CG2100, isoform A [Drosophila melanogaster]
gi|281360112|ref|NP_001163512.1| CG2100, isoform B [Drosophila melanogaster]
gi|7296685|gb|AAF51964.1| CG2100, isoform A [Drosophila melanogaster]
gi|16183624|gb|AAL13714.1| GM13341p [Drosophila melanogaster]
gi|220944702|gb|ACL84894.1| CG2100-PA [synthetic construct]
gi|220954638|gb|ACL89862.1| CG2100-PA [synthetic construct]
gi|272476817|gb|ACZ94811.1| CG2100, isoform B [Drosophila melanogaster]
Length = 477
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 126/260 (48%), Gaps = 63/260 (24%)
Query: 553 LTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGT---- 608
L +PP R ++ P + K+ +PEF S FTPEL L +F+K+ Y+LRIAG
Sbjct: 48 LGKPP-----RMRTNPAFR-KVATPEFKSIFTPELNDLVALFKKYDYELRIAGGAVRDIL 101
Query: 609 -----------VTAKVLSYRNRREKED----------------RIGENQPFRKLTLSVQ- 640
TA + EKE+ RI + + F TL +
Sbjct: 102 MGIPPKDIDLATTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVTTLRIDI 161
Query: 641 -----------------DKDRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVS 675
D +R DGTVYDYF G++DL++ FVG+
Sbjct: 162 RTDGRHAEVMYTTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYDDLQERRVVFVGEADI 221
Query: 676 RIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
RI+ED+LRILRYFRF+ RI + NNH + L+AIK N GL ISGERIW+EL KI+ G+
Sbjct: 222 RIKEDFLRILRYFRFYGRIASEENNHDKATLAAIKENAKGLARISGERIWSELQKIVPGN 281
Query: 736 FSKEMMLKMLYQNLLLFSKL 755
F + L+M NL + L
Sbjct: 282 FGAALFLEMHRCNLFEYIGL 301
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG P DID AT ATPDQMK MF +E+VR N GEKHGT+ R+NDKENFEV
Sbjct: 96 AVRDILMGIPPKDIDLATTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVT 155
Query: 435 PVK 437
++
Sbjct: 156 TLR 158
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 37/40 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLRID+ TDGRHAEV +T DW+LDANRRDLT+NSMFLG
Sbjct: 154 VTTLRIDIRTDGRHAEVMYTTDWQLDANRRDLTINSMFLG 193
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + NNH + L+AIK+N GL ISGERIW+EL KI+ G+F + L+M N
Sbjct: 235 RFYGRIASEENNHDKATLAAIKENAKGLARISGERIWSELQKIVPGNFGAALFLEMHRCN 294
Query: 857 MFPHLGTDETFATLDFEGLFRSM 879
+F ++G + +F+ L +++
Sbjct: 295 LFEYIGLPKEPYLDEFDRLCKAL 317
>gi|312380993|gb|EFR26849.1| hypothetical protein AND_06794 [Anopheles darlingi]
Length = 228
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 94/146 (64%), Gaps = 6/146 (4%)
Query: 3 DGVKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEII 62
D V+ L R + LP Y++ +I H S IWV + GVYDIT FV HPG + +
Sbjct: 88 DQVRKLHDTRRPD----LPEYTMDEIGKHNSASSGIWVTYGIGVYDITTFVPKHPGSDKV 143
Query: 63 MKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSP 122
M AAGG+I+PFW ++ H EV LLE+YRIGN+ + D + KD+ DP+ EP R P
Sbjct: 144 MLAAGGAIDPFWHIFQQHNTQEVLTLLETYRIGNL-RPDEAIGTKDL-HDPWSAEPKRHP 201
Query: 123 LLKATSLKPYNAEPPPSMLVENFLTP 148
+LKA + KP+NAEPP S+LV++FLTP
Sbjct: 202 ILKAATAKPFNAEPPASVLVDSFLTP 227
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 188 GNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
GN+ + D + KD+ DP+ EP R P+LKA + KP+NAEPP S+L S L
Sbjct: 176 GNL-RPDEAIGTKDL-HDPWSAEPKRHPILKAATAKPFNAEPPASVLVDSFL 225
>gi|195502087|ref|XP_002098069.1| GE24143 [Drosophila yakuba]
gi|194184170|gb|EDW97781.1| GE24143 [Drosophila yakuba]
Length = 477
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 136/297 (45%), Gaps = 77/297 (25%)
Query: 506 RGVLS-NAYHRVRVEIWSKAVDSSYNTQPENGHPSGYQPRATLQGARLLTRPPNPHSVRF 564
R +LS NA H R W K + SS G P Q L +PP R
Sbjct: 13 RAILSFNARHHNR---WIKTMTSSMACS------RGASPELIAQ----LGKPP-----RM 54
Query: 565 KSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGT---------------V 609
++ P + K+ +PEF S FTPEL L +F+K+ Y+LRIAG
Sbjct: 55 RTNPAFR-KIATPEFQSIFTPELNELVALFKKYDYELRIAGGAVRDILMGIAPKDIDLAT 113
Query: 610 TAKVLSYRNRREKED----------------RIGENQPFRKLTLSVQ------------- 640
TA + EKE+ RI + + F TL +
Sbjct: 114 TATPEQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVTTLRIDIRTDGRHAEVMYT 173
Query: 641 -----DKDRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
D +R DGTVYDYF ++DL++ FVG+ RI+ED+LRILRY
Sbjct: 174 TDWQLDANRRDLTINSMFLGFDGTVYDYFYAYDDLQERRVVFVGEADIRIKEDFLRILRY 233
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
FRF+ RI + +NH + L AIK N GL ISGERIW+EL KI+ G+F + L+M
Sbjct: 234 FRFYGRIASEESNHDKATLEAIKENAKGLTRISGERIWSELQKIVVGNFGPALFLQM 290
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG P DID AT ATP+QMK MF +E+VR N GEKHGT+ R+NDKENFEV
Sbjct: 96 AVRDILMGIAPKDIDLATTATPEQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVT 155
Query: 435 PVK 437
++
Sbjct: 156 TLR 158
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 37/40 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLRID+ TDGRHAEV +T DW+LDANRRDLT+NSMFLG
Sbjct: 154 VTTLRIDIRTDGRHAEVMYTTDWQLDANRRDLTINSMFLG 193
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + +NH + L AIK+N GL ISGERIW+EL KI+ G+F + L+M
Sbjct: 235 RFYGRIASEESNHDKATLEAIKENAKGLTRISGERIWSELQKIVVGNFGPALFLQMHRCE 294
Query: 857 MFPHLGTDETFATLDFEGLFRSM 879
+F ++G + +F+ L +++
Sbjct: 295 LFEYIGLPKEPYLNEFDRLCKAL 317
>gi|367048303|ref|XP_003654531.1| hypothetical protein THITE_52821 [Thielavia terrestris NRRL 8126]
gi|347001794|gb|AEO68195.1| hypothetical protein THITE_52821 [Thielavia terrestris NRRL 8126]
Length = 575
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 157/361 (43%), Gaps = 52/361 (14%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYG 78
+LP + L++I+ H S WV F VYDIT++V HPGG++I++AAG +IEP+W ++
Sbjct: 111 SLPRFRLAEIRKHDSSSSQPWVTFEDKVYDITDWVPAHPGGDVILRAAGAAIEPYWNIFT 170
Query: 79 VHLQDEVFELLESYRIGNISQED---SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
+H V ++LE Y IG I + D L A + DP+V +PVR P L + KP NAE
Sbjct: 171 IHKSQHVRDILEQYLIGYIDKADLGPDGLPAAETIEDPFVDDPVRDPRLITHTAKPRNAE 230
Query: 136 PPPSMLVENFLTPSLLSQVGSS--TITLDQAIVSKQLSSFKHSDEKLKLVKVMAGNISQE 193
PP L F TP+ L + +D++ + + +++ D K G
Sbjct: 231 PPNEELDRTFRTPNELFYIRHHMWVPVVDESKADEHVLTWQRRD--YKSFGPNEGANPDW 288
Query: 194 DSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLLRIPFCSHTGKVILS 253
D L+ +++ PV S + + + + C G+V
Sbjct: 289 DRALSIQEM--------PVTSAI--------------------TGVWVGDCVRRGRVPWM 320
Query: 254 DHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQ--- 310
+ +H P +D A P S +P + A +
Sbjct: 321 GSKEIAHATSQ-----QPDQSSRILDMAAVPKKVGFTPESRTSIPPSSADTPCPSETPAE 375
Query: 311 -MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL--------TRHWGWTLW 361
+ +QGYA+SGGG+AI RVDV++D G+TW A + W W W
Sbjct: 376 PIALQGYAYSGGGRAIARVDVSLDGGKTWDQAELVDDCGSGDGSGGGGCFGNKTWTWKRW 435
Query: 362 R 362
R
Sbjct: 436 R 436
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D +YNTQPES I+N+RG L+ A+HRV++
Sbjct: 489 KATDDAYNTQPESHRGIYNVRGNLATAWHRVKI 521
>gi|431914003|gb|ELK15265.1| Sulfite oxidase, mitochondrial [Pteropus alecto]
Length = 545
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 100/156 (64%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D ++ ++
Sbjct: 382 GKVSVEPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-KDGEM-ID 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ V+GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 440 SREVTVKGYAWSGGGRAVIRVDVSLDGGLTWQVAQLDGKEQRP--GKAWAWRLWQLQAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 498 PAGEKELNIVCKA-------VDDSYNVQPDTVAPIW 526
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 87/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++++H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+YG+H
Sbjct: 85 YTREEVKSHSSPETRIWVTLGSEVFDVTEFVGLHPGGPSKLMLAAGGPLEPFWALYGIHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V E+L Y+IG +S E+ K ++ SDPY +P+R P LK S P+NAEPPP +L
Sbjct: 145 QSHVREILAQYKIGELSPEE-KASSTLKTSDPYADDPIRHPALKVNSQCPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 504 LNIVCKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVWV 543
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
L + G +S E+ K ++ SDPY +P+R P LK S P+NAEPPP +L
Sbjct: 152 LAQYKIGELSPEE-KASSTLKTSDPYADDPIRHPALKVNSQCPFNAEPPPELL 203
Score = 44.7 bits (104), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E ++K VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMSQLKEVKGLEWSTGAISTARWAGARLCDVLAQAG 306
>gi|198453059|ref|XP_001359047.2| GA15240 [Drosophila pseudoobscura pseudoobscura]
gi|198132197|gb|EAL28190.2| GA15240 [Drosophila pseudoobscura pseudoobscura]
Length = 450
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 136/297 (45%), Gaps = 69/297 (23%)
Query: 553 LTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG------- 605
L +PP R ++ P K+D+PEFH FTPE+ L +F+K+ Y++RIAG
Sbjct: 18 LGKPP-----RMRADP-AFTKVDTPEFHGIFTPEVDSLVSLFKKYDYEIRIAGGAVRDII 71
Query: 606 --------EGTVTAKVLSYRNRREKED----------------RIGENQPFRKLTLSV-- 639
+ TA ++ KE+ RI + F TL +
Sbjct: 72 MGIKPKDIDFATTATPDQMKDMFTKENVRMINSKGEKHGTITPRINGKENFEVTTLRIDV 131
Query: 640 ----QDKDRSFRLD--------------------GTVYDYFNGHEDLKKGVCAFVGDPVS 675
+ D F D GTVYDYF G++DL++ FVGD
Sbjct: 132 RTNGRHADVVFTTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYDDLQQRRVVFVGDADI 191
Query: 676 RIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
RI EDYLRILRYFRF+ RI + +H L+AIK N +GL ISGERIW+EL KI+ G+
Sbjct: 192 RINEDYLRILRYFRFYGRIAKDAESHDPSTLAAIKKNAEGLARISGERIWSELQKIIVGN 251
Query: 736 FSKEMMLKMLYQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNG 792
+ E++L+M NL L L +++ E + F K P M G
Sbjct: 252 YGNELVLEMHRCNLFQHCGLPVKP------NLNEFQILCETLDIFEKPHYPILYMTG 302
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D++MG KP DIDFAT ATPDQMK MF +E VR N KGEKHGT+ R+N KENFEV
Sbjct: 66 AVRDIIMGIKPKDIDFATTATPDQMKDMFTKENVRMINSKGEKHGTITPRINGKENFEVT 125
Query: 435 PVK 437
++
Sbjct: 126 TLR 128
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV T+GRHA+V FT DW+LDANRRDLT+NSMFLG
Sbjct: 124 VTTLRIDVRTNGRHADVVFTTDWQLDANRRDLTINSMFLGF 164
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + +H L+AIKKN +GL ISGERIW+EL KI+ G++ E++L+M N
Sbjct: 205 RFYGRIAKDAESHDPSTLAAIKKNAEGLARISGERIWSELQKIIVGNYGNELVLEMHRCN 264
Query: 857 MFPHLG 862
+F H G
Sbjct: 265 LFQHCG 270
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIR 796
YQ L L + R+Y+ +L+KY K +L W P+FP+NGNI++
Sbjct: 347 YQKLCL----QPYAKRDYVEQLLKYTRKVDLYNQLKAWSNPSFPLNGNILK 393
>gi|307199467|gb|EFN80080.1| tRNA-nucleotidyltransferase 1, mitochondrial [Harpegnathos
saltator]
Length = 433
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 118/230 (51%), Gaps = 57/230 (24%)
Query: 573 KLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG---------------EGTVTAKVLSYR 617
KLDSPEF S FT EL L +F+K+ Y+LRIAG + TA +
Sbjct: 17 KLDSPEFFSLFTSELNILVNLFQKYDYELRIAGGAVRDILMNKYPKDLDFATTATPDQMK 76
Query: 618 NRREKED----------------RIGENQPFRKLTLSVQDKD----------RSFRLD-- 649
EKE+ RI + + F TL + + + ++LD
Sbjct: 77 EMFEKEEIRILNVKGEKHGTITARINDKENFEVTTLRIDNITDGRHAEVEFTKDWKLDAC 136
Query: 650 --------------GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
G +YDYF G++DLK FVG+ +RI EDYLRILRYFRF+ +I
Sbjct: 137 RRDLTINSMFLDFNGKLYDYFYGYDDLKNKKVIFVGNVNTRICEDYLRILRYFRFYGKIM 196
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
++P+ H E + AIK+N++GL ISGERIW+E KIL G F+ E+ LKML
Sbjct: 197 DSPDQHDEATIKAIKDNVNGLQLISGERIWSEWYKILTGKFALELTLKML 246
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 56/75 (74%), Gaps = 3/75 (4%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM K P D+DFAT ATPDQMK MF +E++R N KGEKHGT+ AR+NDKENFEV
Sbjct: 51 AVRDILMNKYPKDLDFATTATPDQMKEMFEKEEIRILNVKGEKHGTITARINDKENFEVT 110
Query: 435 PVK--GLTWG-HAAV 446
++ +T G HA V
Sbjct: 111 TLRIDNITDGRHAEV 125
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/39 (82%), Positives = 36/39 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLRID TDGRHAEV+FT+DWKLDA RRDLT+NSMFL
Sbjct: 109 VTTLRIDNITDGRHAEVEFTKDWKLDACRRDLTINSMFL 147
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ +I ++P+ H E + AIK N++GL ISGERIW+E KIL G F+ E+ LKMLE
Sbjct: 190 RFYGKIMDSPDQHDEATIKAIKDNVNGLQLISGERIWSEWYKILTGKFALELTLKMLECG 249
Query: 857 MFPHLGTDETFATLDFEGLFR 877
++G E +F+ + R
Sbjct: 250 CGKYMGLPENPNIENFQIVCR 270
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 746 YQNLLLFSKL-KATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQF 798
YQ L+ + + REY+ E++KY+ EL+ +F KW +P FP+NG +++
Sbjct: 333 YQQLVFTQQTNRYDVYREYVKEILKYQGAMELLDEFEKWVIPKFPINGIMLKDL 386
>gi|221130100|ref|XP_002159185.1| PREDICTED: sulfite oxidase, mitochondrial-like [Hydra
magnipapillata]
Length = 560
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 82/119 (68%), Gaps = 2/119 (1%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++ILSD E HWQQNDYK FSP+ DW VDF K+ AIQELPV SAICLP+ D+ +
Sbjct: 394 RIILSDKEYNGHWQQNDYKPFSPNIDWHNVDFKKAMAIQELPVTSAICLPLNDSTVHENE 453
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
++ ++GYA+SGGG I+RVDV++D G+TW A+ D +T + WTLW ++P+
Sbjct: 454 KEVTIKGYAYSGGGCGIIRVDVSVDGGKTWVTADLVQADQN--ITDMYSWTLWECSVPI 510
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 86/146 (58%), Gaps = 6/146 (4%)
Query: 9 SKLRAGEPISTLPW--YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKA 65
SK E ++LP Y+ ++ ++ IWV++ V+DIT FV+ HPGG IM A
Sbjct: 81 SKASCNEKSTSLPTSTYTREEVSKKTSKETGIWVIYNNKVFDITAFVENHPGGSSKIMLA 140
Query: 66 AGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLK 125
AG ++EPFW +Y +H +DE+FE+L + IG++ + D +S P+ +P R P L
Sbjct: 141 AGKNLEPFWDIYAIHKKDEIFEMLNEFYIGDLEKND---WIDQKSSGPFANDPPRHPGLL 197
Query: 126 ATSLKPYNAEPPPSMLVENFLTPSLL 151
S +P+NAE P +L EN LTP+ L
Sbjct: 198 VCSKEPFNAETPSILLNENLLTPNEL 223
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 66/153 (43%), Gaps = 34/153 (22%)
Query: 386 HDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDK---ENFEVKPVKGLTWG 442
H++DF KAM +E T +C +ND EN + +KG +
Sbjct: 421 HNVDFK--------KAMAIQELPVT--------SAICLPLNDSTVHENEKEVTIKGYAYS 464
Query: 443 HAAVG----------NATWTGARLVDVLKAAGISPDQSLDSADV-----QHVHVEIWSKA 487
G TW A LV + +L V H +EI KA
Sbjct: 465 GGGCGIIRVDVSVDGGKTWVTADLVQADQNITDMYSWTLWECSVPIPIDHHGKMEIICKA 524
Query: 488 VDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
DSS NTQPE+ +WNLRGVL+NA+HRV+V +
Sbjct: 525 QDSSCNTQPETVGPVWNLRGVLNNAWHRVQVNV 557
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA E +K VKGLTW H+A+ NA W G L D+L +AG+ P+ S +++H+H
Sbjct: 274 CAGNRRNEMNAIKSVKGLTWNHSAISNAEWGGVLLYDILISAGVDPNNS----NIKHIHF 329
Query: 482 E 482
E
Sbjct: 330 E 330
>gi|390460652|ref|XP_002745658.2| PREDICTED: sulfite oxidase, mitochondrial [Callithrix jacchus]
Length = 545
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 99/156 (63%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-QDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ +PV
Sbjct: 440 SGEVTIRGYAWSGGGRAVIRVDVSLDGGLTWQVAELDGEEQRP--RKAWAWRLWQLQVPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 498 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 526
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 87/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ +++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKAEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHD 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYANDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 504 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVHV 543
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELNPED-KVAPTVETSDPYANDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTAHWGGARLCDVLAQAG 306
>gi|417402566|gb|JAA48128.1| Putative sulfite oxidase molybdopterin-binding component [Desmodus
rotundus]
Length = 545
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 100/156 (64%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWD+VDF +P+IQELPV SAI P D ++ +E
Sbjct: 382 GKVSVEPEESYSHWQRRDYKGFSPSVDWDSVDFDSAPSIQELPVQSAITEP-KDGEV-VE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ V+GYAWSGGG+A+VRVDV++D G TW VA G+ Q P + W W LW+ V
Sbjct: 440 SGEVTVKGYAWSGGGRAVVRVDVSLDGGLTWQVAELDGE-KQCP-QKAWAWRLWQLQATV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P KE++I+ +D + N PD + ++
Sbjct: 498 PPGKKELNIVCKA-------VDDSYNVQPDTVAPIW 526
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++++H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y +H
Sbjct: 85 YTREEVKSHSSPETRIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAIHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V E+L Y+IG +S ED K + SDPY +P+R P LK S +P+NAEPPP +L
Sbjct: 145 QSHVREILAQYKIGELSPED-KAPSTLKTSDPYADDPIRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 504 LNIVCKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVHV 543
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
L + G +S ED K + SDPY +P+R P LK S +P+NAEPPP +L
Sbjct: 152 LAQYKIGELSPED-KAPSTLKTSDPYADDPIRHPALKVNSQRPFNAEPPPELL 203
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E ++K VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMNQIKEVKGLEWSTGAISTARWAGARLCDVLAKAG 306
>gi|355722667|gb|AES07647.1| sulfite oxidase [Mustela putorius furo]
Length = 529
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 99/156 (63%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + ++
Sbjct: 366 GKVSVEPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-KDGE-TVQ 423
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A+VRVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 424 SGEVTIKGYAWSGGGRAVVRVDVSLDGGLTWQVAELNGEEQRP--RKAWAWRLWQLQAPV 481
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 482 PAGKKELNIVCKA-------VDDSYNVQPDSVAPIW 510
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 93/141 (65%), Gaps = 4/141 (2%)
Query: 10 KLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGG 68
+ RA E S + Y+ ++++H L++ IWV V+D+TEFV +HPGG +M AAGG
Sbjct: 58 RCRAAEKSSRI--YTREEVKSHSSLETRIWVTLGCEVFDVTEFVDLHPGGPSKLMLAAGG 115
Query: 69 SIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATS 128
+EPFWA+Y VH Q V E+L Y++G +S ED K + SDPY +PVR P LK S
Sbjct: 116 PLEPFWALYAVHDQAHVREILAQYKVGELSSED-KAPSTLKTSDPYADDPVRHPALKVNS 174
Query: 129 LKPYNAEPPPSMLVENFLTPS 149
+P+NAEPPP +L EN++TP+
Sbjct: 175 QRPFNAEPPPELLTENYITPN 195
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP+S A IWNLRGVLSNA+HRV V +
Sbjct: 488 LNIVCKAVDDSYNVQPDSVAPIWNLRGVLSNAWHRVHVRV 527
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 162 DQAIVSKQLSSFKHSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATS 221
DQA V + L+ +K G +S ED K + SDPY +PVR P LK S
Sbjct: 128 DQAHVREILAQYK------------VGELSSED-KAPSTLKTSDPYADDPVRHPALKVNS 174
Query: 222 LKPYNAEPPPSML 234
+P+NAEPPP +L
Sbjct: 175 QRPFNAEPPPELL 187
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 23/43 (53%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E + K VKGL W A+ A W GARL DVL AG
Sbjct: 248 CAGNRRSEMTQFKEVKGLEWNAGAISTARWAGARLCDVLAKAG 290
>gi|298714841|emb|CBJ25740.1| similar to MGC83835 protein [Ectocarpus siliculosus]
Length = 610
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 86/124 (69%), Gaps = 3/124 (2%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
KVI S ES +HWQQ DYKGF+ STDWDT DF+KSPAIQ+LP+ SAI P + + +
Sbjct: 445 KVIASKEESKNHWQQKDYKGFNSSTDWDTADFSKSPAIQQLPINSAILSPADGSSVSQYD 504
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
++ V+GYA +GGG+A+VRVDV+ D G TW A + + PL R W WTLW A++PV
Sbjct: 505 DEVTVKGYAVAGGGRAVVRVDVSADGGETWTSAEL--KPTSQPLYRTWAWTLWEASLPV- 561
Query: 369 PKTK 372
PK K
Sbjct: 562 PKGK 565
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 94/149 (63%), Gaps = 6/149 (4%)
Query: 12 RAGEPISTLPWYSLSDIQNHKDLKSS-IWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGS 69
+AG P S +++ HK ++ +WV + GVYDITEF+ HPGG I AAGG+
Sbjct: 125 KAGGKRDGFPIISKAEVAKHKSAEAGGVWVTYDGGVYDITEFIASHPGGASRISMAAGGA 184
Query: 70 IEPFWAMYGVHLQDEVFELLESYRIGNISQED---SKLAAKDIASDPYVMEPVRSPLLKA 126
+EPFW +Y +H++DEV ++L++ RIG++S ED +K A + DPY +P R P
Sbjct: 185 LEPFWKLYALHMKDEVLDILKTLRIGSLSLEDMAENKSNADKNSDDPYAKDPARHPFFIV 244
Query: 127 TSLKPYNAEPPPSMLVE-NFLTPSLLSQV 154
+ +P+NAEPPP +L++ F+TP+ L V
Sbjct: 245 NNPRPFNAEPPPELLLDAGFITPNDLYYV 273
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 29/35 (82%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
KAVD+ YN+QPE IWN+RGVLSN++HRV +++
Sbjct: 573 KAVDAGYNSQPERPEPIWNIRGVLSNSWHRVGLKV 607
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA ++ VKPVKGL W A+ N+ WTG L DVL+ AG++ + +S+ ++HV
Sbjct: 323 CAGNRREDMTNVKPVKGLGWSCGAISNSEWTGVLLRDVLEHAGVNVNDP-ESSGIEHVQF 381
Query: 482 EIWSKAVDSSYNT 494
E + + + Y +
Sbjct: 382 EGLDRDLTTCYGS 394
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 169 QLSSFKHSDEKLKLVKVM-AGNISQED---SKLAAKDIASDPYVMEPVRSPLLKATSLKP 224
+L + DE L ++K + G++S ED +K A + DPY +P R P + +P
Sbjct: 190 KLYALHMKDEVLDILKTLRIGSLSLEDMAENKSNADKNSDDPYAKDPARHPFFIVNNPRP 249
Query: 225 YNAEPPPSMLYSSLLRIP 242
+NAEPPP +L + P
Sbjct: 250 FNAEPPPELLLDAGFITP 267
>gi|159486451|ref|XP_001701253.1| sulfite oxidase [Chlamydomonas reinhardtii]
gi|158271835|gb|EDO97646.1| sulfite oxidase [Chlamydomonas reinhardtii]
Length = 605
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 95/160 (59%), Gaps = 9/160 (5%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+++ S ES+SHWQQ DYK F PS DWD+VD+ +PAIQE PV SAIC P L
Sbjct: 432 GRIVASPSESSSHWQQRDYKAFCPSVDWDSVDWGSAPAIQEPPVTSAICEPAPGTVLSAA 491
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN----FTGQDSQAPLTRHWGWTLWRA 363
+ ++ ++GYAWSGGG+ IVRVDV+ D G+TW A G +Q T W WTLW A
Sbjct: 492 DGEVTLRGYAWSGGGRGIVRVDVSSDGGKTWSAARLLPPPPGAPAQGSYTGAWAWTLWEA 551
Query: 364 TIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T+P+ + S+ ++ +D + N PD + ++
Sbjct: 552 TLPLPAAGSDSSVTLVVKA-----VDSSYNNQPDSVAGIW 586
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 88/146 (60%), Gaps = 7/146 (4%)
Query: 6 KALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMK 64
K +K G PI Y+ ++ HK K +WV +++GVYDITEF++MHPGG IM
Sbjct: 119 KGPAKDEKGRPI-----YTREEVAKHKTPKDRVWVTYKEGVYDITEFIEMHPGGAAKIML 173
Query: 65 AAGGSIEPFWAMYGVHLQDEVFELLESYRIGNI-SQEDSKLAAKDIASDPYVMEPVRSPL 123
AAGGS+EPFW +Y H + EVF +LE YRIG + + AA DPY +P R P+
Sbjct: 174 AAGGSVEPFWGLYQQHKKPEVFAILEPYRIGTLEGGAAAAAAASAALKDPYAGDPARHPV 233
Query: 124 LKATSLKPYNAEPPPSMLVENFLTPS 149
L + KP+N E P S+L + +TP+
Sbjct: 234 LIPRTQKPFNGETPGSLLAASPVTPT 259
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
C+ E +VKPVKGL W A+G A W G RL DVLKAAG+S D D A V+H+H
Sbjct: 312 CSGNRRNEMSQVKPVKGLEWDQGAIGTAVWGGVRLRDVLKAAGLSED---DPA-VRHIHF 367
Query: 482 E 482
E
Sbjct: 368 E 368
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
KAVDSSYN QP+S A IWNLRGV++NA+HRV + +
Sbjct: 569 KAVDSSYNNQPDSVAGIWNLRGVVNNAWHRVTLPL 603
>gi|348580962|ref|XP_003476247.1| PREDICTED: sulfite oxidase, mitochondrial-like [Cavia porcellus]
Length = 546
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 101/156 (64%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G++ + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 383 GRISVEAEESHSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-QDGE-TIE 440
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ V+GYAWSGGG+A++RVDV++D G TW VA G++ Q+P + W W LW+ PV
Sbjct: 441 SGEVTVKGYAWSGGGRAVIRVDVSLDGGLTWQVAELDGEE-QSP-RKAWAWRLWQLQAPV 498
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 499 PSGKKELNIICKA-------VDDSYNVQPDTVAPIW 527
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 86 YTKEEVSSHSSPETGIWVTLGCEVFDVTEFVNIHPGGPSKLMLAAGGPLEPFWALYAVHN 145
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED+ DI SDPY +P R P L+ S +P+NAEPPP +L
Sbjct: 146 QPHVCELLAEYKIGELNPEDNVSPTLDI-SDPYANDPKRHPALRVNSQRPFNAEPPPELL 204
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 205 TENYVTPN 212
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 505 LNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVHV 544
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
L + G ++ ED+ DI SDPY +P R P L+ S +P+NAEPPP +L
Sbjct: 153 LAEYKIGELNPEDNVSPTLDI-SDPYANDPKRHPALRVNSQRPFNAEPPPELL 204
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E ++K VKGL W A+ A W GARL DVL AG
Sbjct: 265 CAGNRRSEMTQIKEVKGLEWRIGAISTACWAGARLCDVLAQAG 307
>gi|347300237|ref|NP_001231427.1| sulfite oxidase, mitochondrial [Sus scrofa]
Length = 545
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GKVSVEPEESHSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITQP-KDGE-TIE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A+VRVDV++D G TW A G++ + + W W LW+ PV
Sbjct: 440 SREVTIKGYAWSGGGRAVVRVDVSLDGGLTWQAAELDGEEQRP--RKAWAWRLWQLQAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 498 PAGKKELNIICKA-------VDDSYNVQPDTVAPIW 526
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++++H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTREEVRSHSSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHD 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V E+L Y+IG +S ED K + SDPY +P+ P LK S +P+NAEPPP +L
Sbjct: 145 QPHVREILAQYKIGELSPED-KAPSTLKTSDPYANDPICHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HR+ V +
Sbjct: 504 LNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRIHVHV 543
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
L + G +S ED K + SDPY +P+ P LK S +P+NAEPPP +L
Sbjct: 152 LAQYKIGELSPED-KAPSTLKTSDPYANDPICHPALKVNSQRPFNAEPPPELL 203
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 22/43 (51%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E K V+GL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTRFKEVRGLEWNTGAISTARWAGARLCDVLAQAG 306
>gi|301760476|ref|XP_002916105.1| PREDICTED: sulfite oxidase, mitochondrial-like [Ailuropoda
melanoleuca]
gi|281353252|gb|EFB28836.1| hypothetical protein PANDA_004071 [Ailuropoda melanoleuca]
Length = 544
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 100/156 (64%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + ++
Sbjct: 381 GKVSVEPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-KDGE-TVQ 438
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A+VRVDV++D G TW VA G++ Q P + W W LW+ PV
Sbjct: 439 SGEVTIKGYAWSGGGRAVVRVDVSLDGGLTWQVAELDGEE-QCP-RKAWAWRLWQLQAPV 496
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 497 PAGKKELNIVCKA-------VDDSYNVQPDTVAPIW 525
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++++H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 84 YTREEVRSHSSRETRIWVTLGCEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHD 143
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V E+L Y++G +S ED K + SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 144 QSHVREILAQYKVGELSPED-KAPSTVKTSDPYADDPVRHPALKVNSQRPFNAEPPPELL 202
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 203 TENYITPN 210
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV + +
Sbjct: 503 LNIVCKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHIHV 542
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
L + G +S ED K + SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 151 LAQYKVGELSPED-KAPSTVKTSDPYADDPVRHPALKVNSQRPFNAEPPPELL 202
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 23/43 (53%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +K VKGL W A+ A W GARL DVL AG
Sbjct: 263 CAGNRRSEMTRIKEVKGLEWNTGAISTARWAGARLCDVLAKAG 305
>gi|395835172|ref|XP_003790556.1| PREDICTED: sulfite oxidase, mitochondrial [Otolemur garnettii]
Length = 546
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQQ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 383 GRVSVEPEESFSHWQQRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-QDGE-TIE 440
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW A G++ + + W W LW+ PV
Sbjct: 441 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQAAELNGEEQRP--RKAWAWRLWQMQAPV 498
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 499 PAGQKELNIVCKA-------VDDSYNVQPDTVAPIW 527
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 92/141 (65%), Gaps = 4/141 (2%)
Query: 10 KLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGG 68
+ RA + + P Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG
Sbjct: 75 RCRAAQ--KSTPTYTKEEVSSHTTPETGIWVTLGSEVFDVTEFVGLHPGGPSKLMLAAGG 132
Query: 69 SIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATS 128
+EPFWA+Y +H Q V ELL Y+IG ++ E+ ++ D ASDPY +PVR P LK S
Sbjct: 133 PLEPFWALYAIHNQSHVRELLAQYKIGELNPENKVISTWD-ASDPYADDPVRHPALKVNS 191
Query: 129 LKPYNAEPPPSMLVENFLTPS 149
P+NAEPPP +L EN++TP+
Sbjct: 192 QHPFNAEPPPELLTENYITPN 212
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEIWS 522
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V I S
Sbjct: 505 LNIVCKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVHIAS 546
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ E+ ++ D ASDPY +PVR P LK S P+NAEPPP +L
Sbjct: 148 HVRELLAQYKI--GELNPENKVISTWD-ASDPYADDPVRHPALKVNSQHPFNAEPPPELL 204
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 265 CAGNRRSEMTQVKKVKGLEWRTGAISTARWGGARLCDVLAQAG 307
>gi|395516499|ref|XP_003762425.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial
[Sarcophilus harrisii]
Length = 434
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 108/226 (47%), Gaps = 56/226 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MK++SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKVESPEFQSLFTEGLKNLTELFSKEKFELRIAGGAVRDLLNGTKPQDVDFATTATPAQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E + A + N+ EK I EN L + V +D +
Sbjct: 90 KEMFLAAGIRLINNKGEKHGTITARLHEENFEITTLRIDVITDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT+YDYFNG+EDLK FVG+P RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLYDYFNGYEDLKNKKVRFVGNPNERIQEDYLRILRYFRFYGRIA 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMM 741
+ P H + L AIK N GL ISGERIW EL KIL G+ + ++
Sbjct: 210 DRPGTHDSKTLEAIKKNAKGLAGISGERIWVELKKILVGNHANHLV 255
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGTKPQDVDFATTATPAQMKEMFLAAGIRLINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVITDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P H + L AIKKN GL ISGERIW EL KIL G+ + ++ M +++
Sbjct: 203 RFYGRIADRPGTHDSKTLEAIKKNAKGLAGISGERIWVELKKILVGNHANHLVHLMYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTLRIDVTTDGRH 911
+ ++G + +F + +++ P P TLL S ++ + LR+ + + ++
Sbjct: 263 VAHYIGLPAVASLEEFNKISKNVETLSPKPMTLLASLFKVQDDVKNLDLRLKIAKEEKN 321
>gi|449274453|gb|EMC83605.1| tRNA-nucleotidyltransferase 1, mitochondrial, partial [Columba
livia]
Length = 397
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 105/220 (47%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SP+F + FTP L+ LA +FEK Y+LRIAG
Sbjct: 2 MKLQSPQFQALFTPGLRSLAELFEKKNYELRIAGGAVRDLLSGMTPQDIDFATTATPAEM 61
Query: 606 -EGTVTAKVLSYRNRREKEDRIG---ENQPFRKLTLSVQ----------------DKDRS 645
E +A + N+ EK I Q F TL + +KD
Sbjct: 62 KEMFTSAGIRLINNKGEKHGTITARLHEQNFEITTLRIDVVTDGRHAEVEFTTDWEKDAE 121
Query: 646 FR----------LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R LDG +YD+FNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 122 RRDLTVNSMFLGLDGMLYDFFNGYEDLKNKKIRFVGKASERIQEDYLRILRYFRFYGRIA 181
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
P +H+ L A+K N GL ISGERIW EL KIL G+
Sbjct: 182 EKPGDHEPNTLQAVKENAKGLAGISGERIWMELKKILLGN 221
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLTVNSMFLG+
Sbjct: 94 ITTLRIDVVTDGRHAEVEFTTDWEKDAERRDLTVNSMFLGL 134
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G P DIDFAT ATP +MK MF +R N KGEKHGT+ AR+++ +NFE+
Sbjct: 37 AVRDLLSGMTPQDIDFATTATPAEMKEMFTSAGIRLINNKGEKHGTITARLHE-QNFEIT 95
Query: 435 PVK 437
++
Sbjct: 96 TLR 98
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P +H+ L A+K+N GL ISGERIW EL KIL G+ ++ E++
Sbjct: 175 RFYGRIAEKPGDHEPNTLQAVKENAKGLAGISGERIWMELKKILLGNHVNHLVRLTYELD 234
Query: 857 MFPHLGTDETFATLDFEGLFRSMPIPFTLLFS 888
+ ++ E F + + + P P T+L S
Sbjct: 235 IAQYI---EEFDRVS-KNIQNLCPKPMTVLTS 262
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQF 798
YQ+ ++ S+ T R I EL+KY+ + L+++ +W +PTFP++G+ +R+
Sbjct: 309 YQDFIMDSREANTNSR--ICELLKYQGEEHLLREMQQWTVPTFPVSGHDLRKM 359
>gi|355786202|gb|EHH66385.1| Sulfite oxidase, mitochondrial [Macaca fascicularis]
Length = 545
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLQAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 498 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 526
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V
Sbjct: 504 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHV 541
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAKAG 306
>gi|355564344|gb|EHH20844.1| Sulfite oxidase, mitochondrial [Macaca mulatta]
Length = 545
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLQAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 498 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 526
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V
Sbjct: 504 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHV 541
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 306
>gi|77735689|ref|NP_001029538.1| sulfite oxidase, mitochondrial [Bos taurus]
gi|75773753|gb|AAI04579.1| Sulfite oxidase [Bos taurus]
gi|440897249|gb|ELR48981.1| Sulfite oxidase, mitochondrial [Bos grunniens mutus]
Length = 547
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 96/156 (61%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELP+ SAI P +
Sbjct: 384 GKVSVEPEESFSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPIQSAITQPKEGETIG-- 441
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ V+GYAWSGGG+A+VRVDV++D G TW VA G++ +A + W W LW P+
Sbjct: 442 SGEVTVKGYAWSGGGRAVVRVDVSLDGGLTWQVAELEGEEQRA--RKAWAWRLWHLQAPL 499
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 500 PAGIKELNIVCKA-------VDESYNVQPDTVAPIW 528
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYGVHL 81
Y+ ++++H ++ +WV V+DITEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 87 YTREEVKSHSSPETGVWVTLGCEVFDITEFVDIHPGGASKLMLAAGGPLEPFWALYAVHN 146
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V E+L Y+IG +S +D K + SDPY +P+R LK + +P+NAEPPP +L
Sbjct: 147 QPHVREILAQYKIGELSPDD-KAPSILKTSDPYADDPIRHSALKVNTQRPFNAEPPPELL 205
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 206 TENYITPN 213
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVL+NA+HRV V +
Sbjct: 506 LNIVCKAVDESYNVQPDTVAPIWNLRGVLNNAWHRVHVHV 545
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E + K V+GL W A+ A W GARL DVL AG
Sbjct: 266 CAGNRRSEMTQFKEVRGLEWSLGAISTARWAGARLCDVLAQAG 308
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G +S +D K + SDPY +P+R LK + +P+NAEPPP +L
Sbjct: 149 HVREILAQYKI--GELSPDD-KAPSILKTSDPYADDPIRHSALKVNTQRPFNAEPPPELL 205
>gi|109097209|ref|XP_001113374.1| PREDICTED: sulfite oxidase, mitochondrial-like isoform 1 [Macaca
mulatta]
gi|109097211|ref|XP_001113406.1| PREDICTED: sulfite oxidase, mitochondrial-like isoform 2 [Macaca
mulatta]
gi|109097215|ref|XP_001113456.1| PREDICTED: sulfite oxidase, mitochondrial-like isoform 4 [Macaca
mulatta]
gi|297262646|ref|XP_002798665.1| PREDICTED: sulfite oxidase, mitochondrial-like [Macaca mulatta]
gi|297262648|ref|XP_002798666.1| PREDICTED: sulfite oxidase, mitochondrial-like [Macaca mulatta]
gi|297262650|ref|XP_002798667.1| PREDICTED: sulfite oxidase, mitochondrial-like [Macaca mulatta]
Length = 545
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLQAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 498 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 526
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V
Sbjct: 504 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHV 541
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 306
>gi|441631975|ref|XP_004089661.1| PREDICTED: LOW QUALITY PROTEIN: sulfite oxidase, mitochondrial
[Nomascus leucogenys]
Length = 544
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 381 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 438
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 439 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLKAPV 496
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 497 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 525
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 79/131 (60%), Gaps = 9/131 (6%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+YGVH
Sbjct: 85 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYGVHN 144
Query: 82 QDEVFELLESYRIGNIS---QEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPP 138
Q V ELL Y+IG ++ + + +A D PVR P +K S +P+NAEPP
Sbjct: 145 QSHVRELLAQYKIGEVNLRXKVTPTMRHLSLADD-----PVRHPAMKVNSQRPFNAEPPL 199
Query: 139 SMLVENFLTPS 149
S N++TP+
Sbjct: 200 SXADRNYITPN 210
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 503 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVYV 542
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 263 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 305
>gi|432857345|ref|XP_004068650.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Oryzias latipes]
Length = 423
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 117/233 (50%), Gaps = 59/233 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
M+L + EF S FT LK LAG+FEKH Y+LRIAG G V
Sbjct: 20 MRLKTTEFQSLFTEGLKGLAGLFEKHQYELRIAG-GAVRDLLSGKRPEDVDFATTATPEQ 78
Query: 610 ------TAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDK 642
A + N+ EK I N+ F TL V +D
Sbjct: 79 MKSLFQAAGIRMINNKGEKHGTITARLHNENFEVTTLRVDVQTDGRHAEVEFTMDWQKDA 138
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R LDGT+YDYF G+EDL+ FVG P RIQED+LRILRYFRF+ R+
Sbjct: 139 ERRDLTINSMFLGLDGTLYDYFKGYEDLQNHRVRFVGSPEQRIQEDFLRILRYFRFYGRV 198
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
P+ H+ E L+AIK + GL ISGERIW EL KI+ G+ + +L+++Y+
Sbjct: 199 ALKPDEHEPETLAAIKEHGQGLAFISGERIWVELKKIVVGNHAAH-LLELIYK 250
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+P D+DFAT ATP+QMK++F +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 55 AVRDLLSGKRPEDVDFATTATPEQMKSLFQAAGIRMINNKGEKHGTITARLHN-ENFEVT 113
Query: 435 PVK 437
++
Sbjct: 114 TLR 116
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG+
Sbjct: 112 VTTLRVDVQTDGRHAEVEFTMDWQKDAERRDLTINSMFLGL 152
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ P+ H+ E L+AIK++ GL ISGERIW EL KI+ G+ + ++ + ++
Sbjct: 193 RFYGRVALKPDEHEPETLAAIKEHGQGLAFISGERIWVELKKIVVGNHAAHLLELIYKME 252
Query: 857 MFPHLG 862
+ ++G
Sbjct: 253 LAQYIG 258
>gi|152031696|sp|Q60HD0.3|SUOX_MACFA RecName: Full=Sulfite oxidase, mitochondrial; Flags: Precursor
gi|52782277|dbj|BAD51985.1| sulfite oxidase [Macaca fascicularis]
Length = 545
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLQAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 498 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 526
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEF +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPETGIWVALGSEVFDVTEFADLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y++G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKVGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V
Sbjct: 504 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHV 541
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L KV G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKV--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAKAG 306
>gi|297262654|ref|XP_002798668.1| PREDICTED: sulfite oxidase, mitochondrial-like [Macaca mulatta]
Length = 552
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 389 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 446
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 447 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLQAPV 504
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 505 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 533
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 92 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 151
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 152 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 210
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 211 TENYITPN 218
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V
Sbjct: 511 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHV 548
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 154 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 210
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 271 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 313
>gi|296487646|tpg|DAA29759.1| TPA: sulfite oxidase, mitochondrial [Bos taurus]
Length = 547
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 96/156 (61%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELP+ SAI P +
Sbjct: 384 GKVSVEPEESFSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPIQSAITQPKEGETIG-- 441
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ V+GYAWSGGG+A+VRVDV++D G TW VA G++ +A + W W LW P+
Sbjct: 442 SGEVTVKGYAWSGGGRAVVRVDVSLDGGLTWQVAELEGEEQRA--RKAWAWRLWHLQAPL 499
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 500 PAGIKELNIVCKA-------VDESYNVQPDTVAPIW 528
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYGVHL 81
Y+ ++++H ++ +WV V+DITEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 87 YTREEVKSHSSPETGVWVTLGCEVFDITEFVDIHPGGASKLMLAAGGPLEPFWALYAVHN 146
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V E+L Y+IG +S +D K + SDPY +P+R LK + P+NAEPPP +L
Sbjct: 147 QPHVREILAQYKIGELSPDD-KAPSILKTSDPYADDPIRHSALKVNTQHPFNAEPPPELL 205
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 206 TENYITPN 213
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVL+NA+HRV V +
Sbjct: 506 LNIVCKAVDESYNVQPDTVAPIWNLRGVLNNAWHRVHVHV 545
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E + K V+GL W A+ A W GARL DVL AG
Sbjct: 266 CAGNRRSEMTQFKEVRGLEWSLGAISTARWAGARLCDVLAQAG 308
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G +S +D K + SDPY +P+R LK + P+NAEPPP +L
Sbjct: 149 HVREILAQYKI--GELSPDD-KAPSILKTSDPYADDPIRHSALKVNTQHPFNAEPPPELL 205
>gi|426372981|ref|XP_004053391.1| PREDICTED: sulfite oxidase, mitochondrial isoform 1 [Gorilla
gorilla gorilla]
gi|426372983|ref|XP_004053392.1| PREDICTED: sulfite oxidase, mitochondrial isoform 2 [Gorilla
gorilla gorilla]
Length = 545
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLKAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 498 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 526
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 504 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVYV 543
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 306
>gi|197098458|ref|NP_001124580.1| sulfite oxidase, mitochondrial [Pongo abelii]
gi|55725027|emb|CAH89381.1| hypothetical protein [Pongo abelii]
Length = 545
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLKAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 498 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 526
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 504 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVYV 543
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 306
>gi|291389413|ref|XP_002711112.1| PREDICTED: sulfite oxidase-like [Oryctolagus cuniculus]
Length = 545
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESGSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ V+GYAWSGGG+A++RVDV++D G TW A G++ Q P + W W LW+ PV
Sbjct: 440 SGEVTVKGYAWSGGGRAVIRVDVSLDGGLTWQAAELYGEE-QCP-RKAWAWRLWQLQAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE+ I+ +D + N PD + ++
Sbjct: 498 PAGQKELHIVCKA-------VDESYNVQPDTVAPIW 526
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYGVHL 81
YS ++++H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YSKEEVRSHSRPETGIWVTLGSEVFDVTEFVDLHPGGASKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG + ED+ + + S+PY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QPHVRELLAQYKIGELHPEDTTPSTLET-SNPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPSLL 151
EN++TP+ L
Sbjct: 204 TENYITPNPL 213
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 504 LHIVCKAVDESYNVQPDTVAPIWNLRGVLSNAWHRVHVRV 543
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G + ED+ + + S+PY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELHPEDTTPSTLET-SNPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMSQVKEVKGLEWNTGAISTARWAGARLCDVLVQAG 306
>gi|403296947|ref|XP_003939354.1| PREDICTED: sulfite oxidase, mitochondrial isoform 1 [Saimiri
boliviensis boliviensis]
gi|403296949|ref|XP_003939355.1| PREDICTED: sulfite oxidase, mitochondrial isoform 2 [Saimiri
boliviensis boliviensis]
gi|403296951|ref|XP_003939356.1| PREDICTED: sulfite oxidase, mitochondrial isoform 3 [Saimiri
boliviensis boliviensis]
Length = 545
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 99/156 (63%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTV+F +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVNFDSAPSIQELPVQSAITEP-QDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ +PV
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAELDGEEQRP--RKAWAWRLWQLQVPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 498 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 526
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H + IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPATGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG +S ED K+A SDPY +PVR P LK S P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKIGELSPED-KVAPTVETSDPYADDPVRHPALKVNSQCPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 504 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVHV 543
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G +S ED K+A SDPY +PVR P LK S P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELSPED-KVAPTVETSDPYADDPVRHPALKVNSQCPFNAEPPPELL 203
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTARWGGARLCDVLAQAG 306
>gi|426372985|ref|XP_004053393.1| PREDICTED: sulfite oxidase, mitochondrial isoform 3 [Gorilla
gorilla gorilla]
Length = 552
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 389 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 446
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 447 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLKAPV 504
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 505 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 533
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 92 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 151
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 152 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 210
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 211 TENYITPN 218
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 511 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVYV 550
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 154 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 210
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 271 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 313
>gi|152031698|sp|Q07116.2|SUOX_RAT RecName: Full=Sulfite oxidase, mitochondrial; Flags: Precursor
gi|211828197|gb|AAH61991.2| Sulfite oxidase [Rattus norvegicus]
Length = 546
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 91/128 (71%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYGVHL 81
YS D+++H +LK+ +WV V+D+T+FV +HPGG+ +M AAGG +EPFWA+Y VH
Sbjct: 86 YSKEDVRSHNNLKTGVWVTLGSEVFDVTKFVDLHPGGQSKLMLAAGGPLEPFWALYAVHN 145
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED +++ ASDPY +P+R P L+ S +P+NAEPPP +L
Sbjct: 146 QPHVRELLAEYKIGELNPED-RMSPPLEASDPYSNDPMRHPALRINSQRPFNAEPPPELL 204
Query: 142 VENFLTPS 149
E+++TP+
Sbjct: 205 TESYITPN 212
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELP+ SAI P +E
Sbjct: 383 GRVSVESEESYSHWQRRDYKGFSPSVDWDTVDFDLAPSIQELPIQSAITQP--QDGTTVE 440
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW A G++ Q P + W W +W+ V
Sbjct: 441 SGEVIIKGYAWSGGGRAVIRVDVSMDGGLTWQEAELEGEE-QHP-RKAWAWRIWQLKAHV 498
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ KE++I+ +D + N PD + ++
Sbjct: 499 PAEQKELNIICKA-------VDDSYNVQPDTVAPIW 527
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V++
Sbjct: 505 LNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVQV 544
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
L + G ++ ED +++ ASDPY +P+R P L+ S +P+NAEPPP +L S +
Sbjct: 153 LAEYKIGELNPED-RMSPPLEASDPYSNDPMRHPALRINSQRPFNAEPPPELLTESYI 209
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 265 CAGNRRSEMNKVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 307
>gi|291228308|ref|XP_002734128.1| PREDICTED: CG7280-like [Saccoglossus kowalevskii]
Length = 619
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 91/142 (64%), Gaps = 1/142 (0%)
Query: 13 AGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEP 72
AG+ I +P Y+ +++ H D IW+ ++ VYD+TEF+ HPGG+ IM AAGG +EP
Sbjct: 143 AGKAIPGIPEYTATEVARHDDPNRGIWMTYKDAVYDVTEFITAHPGGDRIMMAAGGGLEP 202
Query: 73 FWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPY 132
FW ++ +H +VFE LE YRIGN+++E K D ++P+ +P+R P + +S +P+
Sbjct: 203 FWEVFEIHQNAKVFEQLELYRIGNLAKEGRKEYTPD-PNNPFANDPLRHPAIIPSSKRPF 261
Query: 133 NAEPPPSMLVENFLTPSLLSQV 154
N EPP +L+E F TP L V
Sbjct: 262 NGEPPSDLLIEKFSTPQQLFYV 283
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 82/120 (68%), Gaps = 2/120 (1%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G++ +SD ES SHWQQNDYKGFSP +T D++K IQE PV SA+C+PV + + +
Sbjct: 454 GRITISDEESQSHWQQNDYKGFSPEVTLETADYSKQAPIQEYPVQSAVCVPVNGSTISSK 513
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ V+GYAWSGGG+ I RVDV++D G+TW A + + R+W WT+W T+P+
Sbjct: 514 DEEITVKGYAWSGGGRGIFRVDVSLDGGKTWFEALL--KQEKRTFNRNWAWTIWHVTLPI 571
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
++I KAVDS+YN QP +F WN RGVL+NA+ +V+I
Sbjct: 579 LDIVCKAVDSAYNVQPNTFHGHWNFRGVLANAWSHSQVKI 618
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 397 DQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARL 456
D+ F+ + ++ F + CA E E K VKGL+W +A+GNAT+TG +L
Sbjct: 307 DEGTVEFSLKDLKKFRKSSVTATLQCAGNRRSEMNEYKTVKGLSWKQSAIGNATFTGVKL 366
Query: 457 VDVLKAAGISPDQSLDSADVQHVHVE 482
DVL G +S S +HV E
Sbjct: 367 RDVLMFVGFK--ESDPSYKGKHVQFE 390
>gi|426224977|ref|XP_004006645.1| PREDICTED: sulfite oxidase, mitochondrial [Ovis aries]
Length = 545
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 96/156 (61%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELP+ SAI P +
Sbjct: 382 GKVSVEPEESFSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPIQSAITQPKEGEIIG-- 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ V+GYAWSGGG+A+VRVDV++D G TW VA G++ +A + W W LW P+
Sbjct: 440 SGEVTVKGYAWSGGGRAVVRVDVSLDGGLTWQVAELEGEEQRA--RKAWAWRLWHLQAPL 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 498 PAGIKELNIVCKA-------VDESYNVQPDTVAPIW 526
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYGVHL 81
Y+ ++++H ++ +WV V+DITEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTREEVKSHCSPETGVWVTLGSEVFDITEFVDIHPGGASKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V E+L Y+IG +S +D K + SDPY+ +P+R LK + P+NAEPPP +L
Sbjct: 145 QPHVREILAQYKIGELSPDD-KAPSILKTSDPYMDDPIRHSALKVNTQCPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVL+NA+HRV V +
Sbjct: 504 LNIVCKAVDESYNVQPDTVAPIWNLRGVLNNAWHRVHVHV 543
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E + K V+GL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQFKEVRGLEWSLGAISTARWAGARLCDVLAQAG 306
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G +S +D K + SDPY+ +P+R LK + P+NAEPPP +L
Sbjct: 147 HVREILAQYKI--GELSPDD-KAPSILKTSDPYMDDPIRHSALKVNTQCPFNAEPPPELL 203
>gi|402886379|ref|XP_003906607.1| PREDICTED: sulfite oxidase, mitochondrial isoform 1 [Papio anubis]
gi|402886381|ref|XP_003906608.1| PREDICTED: sulfite oxidase, mitochondrial isoform 2 [Papio anubis]
Length = 545
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLQAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+E++I+ +D N PD + ++
Sbjct: 498 PAGQRELNIVCKA-------VDDGYNVQPDTVAPIW 526
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V
Sbjct: 504 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHV 541
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS 470
CA E +VK VKGL W A+ A W GARL DVL AG P ++
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAGHQPCET 312
>gi|351706960|gb|EHB09879.1| tRNA-nucleotidyltransferase 1, mitochondrial [Heterocephalus
glaber]
Length = 384
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 96/172 (55%), Gaps = 12/172 (6%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTAKVLSYRNRREKEDRIGENQP 631
MKL SPEF S FT LK L +F K ++LRIAG G V + L + + D P
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFIKENHELRIAG-GAV--RDLLNGVKPQDVDFATTATP 86
Query: 632 FR-KLTLSVQDKDRSFR--------LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYL 682
+ K DK + + DGT+YDYFNG+ DLK FVG RIQEDYL
Sbjct: 87 TQMKEMFQAADKQQRRKAWNNYCQGFDGTLYDYFNGYADLKSKKVKFVGHAKQRIQEDYL 146
Query: 683 RILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
RILRYFRF+ RI + P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 147 RILRYFRFYGRIVDKPGDHDPETLEAIAENAKGLGGISGERIWVELKKILTG 198
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 14/140 (10%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G ++ + +++
Sbjct: 153 RFYGRIVDKPGDHDPETLEAIAENAKGLGGISGERIWVELKKILTGDHVNHLIHLIYDLD 212
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITT--LRIDVTTDGR 910
+ P++G + +F + +++ P P T+L A+ F+ +T LR+ ++ + +
Sbjct: 213 VAPYIGLPANASLEEFNKVSKNVDSFSPKPMTVL--ASLFKVQDDVTQLDLRLKISKEEK 270
Query: 911 HAEVQFTEDWKLDANRRDLT 930
+ + + NR+DL
Sbjct: 271 NLGLFIVK------NRKDLV 284
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFA----EEKVRTFNEKGEKH-GTVCARMNDKE 429
++ D+L G KP D+DFAT ATP QMK MF +++ + +N + GT+ N
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPTQMKEMFQAADKQQRRKAWNNYCQGFDGTLYDYFNGYA 124
Query: 430 NFEVKPVKGLTWGHA 444
+ + K VK + GHA
Sbjct: 125 DLKSKKVKFV--GHA 137
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 296 YQDFIIDSREPDMTGR--VCELLKYQGEHRLLKEMEQWSIPPFPVSGHDIRK 345
>gi|295849244|gb|ADG45310.1| truncated mitochondrial sulfite oxidase [Homo sapiens]
Length = 399
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 306
>gi|402886383|ref|XP_003906609.1| PREDICTED: sulfite oxidase, mitochondrial isoform 3 [Papio anubis]
Length = 552
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + +E
Sbjct: 389 GRVSVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-RDGE-TVE 446
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 447 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLQAPV 504
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+E++I+ +D N PD + ++
Sbjct: 505 PAGQRELNIVCKA-------VDDGYNVQPDTVAPIW 533
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 92 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 151
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 152 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 210
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 211 TENYITPN 218
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V
Sbjct: 511 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHV 548
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 154 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 210
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS 470
CA E +VK VKGL W A+ A W GARL DVL AG P ++
Sbjct: 271 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAGHQPCET 319
>gi|290999951|ref|XP_002682543.1| mitochondrial sulfite oxidase [Naegleria gruberi]
gi|284096170|gb|EFC49799.1| mitochondrial sulfite oxidase [Naegleria gruberi]
Length = 443
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 100/157 (63%), Gaps = 10/157 (6%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
K+ILS+ ES S WQQ DYK FSPSTDWD DF+KS A+ + PV SAIC+P D+++ ++
Sbjct: 273 KIILSEQESQSVWQQKDYKTFSPSTDWDNADFSKSSAVHDAPVQSAICVPSPDSRIASDS 332
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL--TRHWGWTLWRATIP 366
+ V+GYA +G G I RVD+T D G TWH T Q + PL R++GWTLW+ +P
Sbjct: 333 ETIVVKGYALAGSGNGIERVDITTDNGTTWH----TAQLEREPLKYNRNYGWTLWQVEVP 388
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ K+++ + + K +D A N P+ +K+++
Sbjct: 389 L--SEKDITEGKLKLCSKA--VDTAYNVQPEDVKSIW 421
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 63 MKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKL------AAKDIASDPYVM 116
M AAG SIEPFW +Y H EV+E+L Y+IG + ED+K K ++D Y
Sbjct: 1 MLAAGKSIEPFWEIYRQHHTKEVYEILSQYKIGELHPEDAKKLKEQFEQQKSNSNDIYAN 60
Query: 117 EPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSLL 151
+P R+P+L KP+NAE PP++L + ++TP+ L
Sbjct: 61 DPARNPILVVNMQKPFNAETPPTLLCDKYITPNEL 95
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHV 479
CA E K +GL W +AAVGNA WTG +LVD+L+A GI+ D+ L V+HV
Sbjct: 150 CAGNRRTEMSCYKAPRGLGWTNAAVGNAMWTGVKLVDILEAYGITEDKILQDGKVKHV 207
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 471 LDSADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEIWSK 523
L D+ +++ SKAVD++YN QPE +IWN+RG+L+N +H V V I +K
Sbjct: 389 LSEKDITEGKLKLCSKAVDTAYNVQPEDVKSIWNIRGILNNTWHCVNVSIENK 441
>gi|74099694|ref|NP_000447.2| sulfite oxidase, mitochondrial [Homo sapiens]
gi|74099702|ref|NP_001027558.1| sulfite oxidase, mitochondrial [Homo sapiens]
gi|74099704|ref|NP_001027559.1| sulfite oxidase, mitochondrial [Homo sapiens]
gi|152031695|sp|P51687.2|SUOX_HUMAN RecName: Full=Sulfite oxidase, mitochondrial; Flags: Precursor
gi|112180540|gb|AAH65193.2| Sulfite oxidase [Homo sapiens]
gi|119617273|gb|EAW96867.1| sulfite oxidase, isoform CRA_a [Homo sapiens]
gi|119617275|gb|EAW96869.1| sulfite oxidase, isoform CRA_a [Homo sapiens]
gi|119617276|gb|EAW96870.1| sulfite oxidase, isoform CRA_a [Homo sapiens]
gi|119617277|gb|EAW96871.1| sulfite oxidase, isoform CRA_a [Homo sapiens]
Length = 545
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 145 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 204 TENYITPN 211
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DW+TVDF +P+IQELPV SAI P D + +E
Sbjct: 382 GRVSVQPEESYSHWQRRDYKGFSPSVDWETVDFDSAPSIQELPVQSAITEP-RDGE-TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLKAPV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 498 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 526
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 504 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVYV 543
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 147 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 203
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 306
>gi|170055265|ref|XP_001863506.1| CCA-adding enzyme [Culex quinquefasciatus]
gi|167875250|gb|EDS38633.1| CCA-adding enzyme [Culex quinquefasciatus]
Length = 430
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 116/235 (49%), Gaps = 57/235 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEG---------------------TVT 610
MK+D+PEF S FT EL+ L +F ++ +++R+AG T
Sbjct: 14 MKVDTPEFRSIFTKELEDLIELFRRYDHEIRVAGGAVRDILMGLCPKDIDIATTATPTEM 73
Query: 611 AKVLSYRNRR------EKED----RIGENQPFRKLTLSVQ------------------DK 642
++ + N R EK RI + + F TL + D
Sbjct: 74 KEIFTKENIRMVNMNGEKHGTITPRINDRENFEITTLRIDAVTDGRHAEVIHTKDWLLDA 133
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R DG+VYDYF G++DL+K AFVGDP RI+EDYLRILRYFRF+ RI
Sbjct: 134 NRRDLTINSMFLGFDGSVYDYFYGYDDLQKRRVAFVGDPDLRIKEDYLRILRYFRFYGRI 193
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL 749
+NH +E L I N GL ISGERIW E KI+ G+F ++ +KM+ +L
Sbjct: 194 AERIDNHDKETLRIIAKNASGLAKISGERIWQEWKKIMAGNFGCDLTVKMINSDL 248
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG P DID AT ATP +MK +F +E +R N GEKHGT+ R+ND+ENFE+
Sbjct: 49 AVRDILMGLCPKDIDIATTATPTEMKEIFTKENIRMVNMNGEKHGTITPRINDRENFEIT 108
Query: 435 PVK 437
++
Sbjct: 109 TLR 111
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 35/41 (85%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID TDGRHAEV T+DW LDANRRDLT+NSMFLG
Sbjct: 107 ITTLRIDAVTDGRHAEVIHTKDWLLDANRRDLTINSMFLGF 147
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI +NH +E L I KN GL ISGERIW E KI+ G+F ++ +KM+ +
Sbjct: 188 RFYGRIAERIDNHDKETLRIIAKNASGLAKISGERIWQEWKKIMAGNFGCDLTVKMINSD 247
Query: 857 MFPHLGTDETFATLDFEGLFRSM 879
+ +G E +F +F+++
Sbjct: 248 LSASIGLPEKPNVEEFVRVFKNI 270
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNII 795
+Q L L + A +EY++EL++Y K EL +W++P FP+ GN++
Sbjct: 330 FQQLSLHTLGSAKLKKEYVLELLRYHGKRELYAQLKEWQIPAFPIKGNVL 379
>gi|449474240|ref|XP_002186976.2| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial
[Taeniopygia guttata]
Length = 404
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 111/232 (47%), Gaps = 57/232 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
M+L +P+F + FTP L+ +A +FEK Y+LRIAG
Sbjct: 1 MRLQAPQFQALFTPGLRSVAELFEKKNYELRIAGGAVRDLLSGVTPQDIDFATTATPAEM 60
Query: 606 -EGTVTAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDKD 643
E A V N+ EK I Q F TL + +D +
Sbjct: 61 KEMFTAAGVRLINNKGEKHGTITARLHEQNFEITTLRIDVVTDGRHAEVEFTTDWHKDAE 120
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R LDGT+YD+FNG+EDL FVG RIQEDYLRILRYFRF+ RI
Sbjct: 121 RRDLTVNSMFLGLDGTLYDFFNGYEDLINKKIRFVGKAAERIQEDYLRILRYFRFYGRIA 180
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
P +H+ L AIK N GL ISGERIW EL KIL G+ +++++Y+
Sbjct: 181 EKPGDHEPNTLQAIKENAKGLAGISGERIWVELKKILLGNHVNH-LIQLMYE 231
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW DA RRDLTVNSMFLG+
Sbjct: 93 ITTLRIDVVTDGRHAEVEFTTDWHKDAERRDLTVNSMFLGL 133
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G P DIDFAT ATP +MK MF VR N KGEKHGT+ AR+++ +NFE+
Sbjct: 36 AVRDLLSGVTPQDIDFATTATPAEMKEMFTAAGVRLINNKGEKHGTITARLHE-QNFEIT 94
Query: 435 PVK 437
++
Sbjct: 95 TLR 97
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P +H+ L AIK+N GL ISGERIW EL KIL G+ ++ M E++
Sbjct: 174 RFYGRIAEKPGDHEPNTLQAIKENAKGLAGISGERIWVELKKILLGNHVNHLIQLMYELD 233
Query: 857 M-----FPHLGTDETFATLDFEGLFRSMPIPFTLLFSANFFRNLARITTL 901
+ P G E FA + + + P P T+L S F+ +T L
Sbjct: 234 IAQYIGLPLDGNLEEFARVS-KNIQNLSPKPMTVLTS--LFKGKDDVTNL 280
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQF 798
YQ+ L+ S+ T + I EL+KY+ + +L+K+ +W +P+FP++G+ +R+
Sbjct: 316 YQDFLMDSREANTNSK--IFELLKYQGEEQLLKEMQEWTVPSFPVSGHDLRKM 366
>gi|74024923|ref|NP_112389.3| sulfite oxidase, mitochondrial precursor [Rattus norvegicus]
gi|149029656|gb|EDL84827.1| sulfite oxidase [Rattus norvegicus]
Length = 546
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 91/128 (71%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYGVHL 81
YS D+++H +L++ +WV V+D+T+FV +HPGG+ +M AAGG +EPFWA+Y VH
Sbjct: 86 YSKEDVRSHNNLQTGVWVTLGSEVFDVTKFVDLHPGGQSKLMLAAGGPLEPFWALYAVHN 145
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED +++ ASDPY +P+R P L+ S +P+NAEPPP +L
Sbjct: 146 QPHVRELLAEYKIGELNPED-RMSPPLEASDPYSNDPMRHPALRINSQRPFNAEPPPELL 204
Query: 142 VENFLTPS 149
E+++TP+
Sbjct: 205 TESYITPN 212
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELP+ SAI P +E
Sbjct: 383 GRVSVESEESYSHWQRRDYKGFSPSVDWDTVDFDLAPSIQELPIQSAITQP--QDGTTVE 440
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW A G++ Q P + W W +W+ V
Sbjct: 441 SGEVIIKGYAWSGGGRAVIRVDVSMDGGLTWQEAELEGEE-QHP-RKAWAWRIWQLKAHV 498
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ KE++I+ +D + N PD + ++
Sbjct: 499 PAEQKELNIICKA-------VDDSYNVQPDTVAPIW 527
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V++
Sbjct: 505 LNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVQV 544
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
L + G ++ ED +++ ASDPY +P+R P L+ S +P+NAEPPP +L S +
Sbjct: 153 LAEYKIGELNPED-RMSPPLEASDPYSNDPMRHPALRINSQRPFNAEPPPELLTESYI 209
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 265 CAGNRRSEMNKVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 307
>gi|508502|gb|AAA74886.1| sulfite oxidase [Homo sapiens]
gi|15858873|gb|AAL08048.1| sulfite oxidase [Homo sapiens]
gi|189053463|dbj|BAG35629.1| unnamed protein product [Homo sapiens]
gi|1098062|prf||2115221A sulfide oxidase
Length = 488
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 28 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 87
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 88 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 146
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 147 TENYITPN 154
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DW+TVDF +P+IQELPV SAI P D + +E
Sbjct: 325 GRVSVQPEESYSHWQRRDYKGFSPSVDWETVDFDSAPSIQELPVQSAITEP-RDGE-TVE 382
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW VA G++ + + W W LW+ PV
Sbjct: 383 SGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRP--RKAWAWRLWQLKAPV 440
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D N PD + ++
Sbjct: 441 PAGQKELNIVCKA-------VDDGYNVQPDTVAPIW 469
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD YN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 447 LNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVYV 486
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G ++ ED K+A SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 90 HVRELLAQYKI--GELNPED-KVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELL 146
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 207 CAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 249
>gi|30750040|pdb|1OU5|A Chain A, Crystal Structure Of Human Cca-Adding Enzyme
gi|30750041|pdb|1OU5|B Chain B, Crystal Structure Of Human Cca-Adding Enzyme
Length = 448
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 105/224 (46%), Gaps = 58/224 (25%)
Query: 569 DGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV------------------- 609
D KMKL SPEF S FT LK L +F K ++LRIAG G V
Sbjct: 41 DDKMKLQSPEFQSLFTEGLKSLTELFVKENHELRIAG-GAVRDLLNGVKPQDIDFATTAT 99
Query: 610 ---------TAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV---------------- 639
+A + NR EK I EN L + V
Sbjct: 100 PTQMKEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQ 159
Query: 640 QDKDRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFF 691
+D +R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+
Sbjct: 160 KDAERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFY 219
Query: 692 ARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
RI + P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 220 GRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 263
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 136 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 176
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 79 AVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 137
Query: 435 PVK 437
++
Sbjct: 138 TLR 140
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 217 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 276
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTLRI 903
+ P++G + +F+ + +++ P P TLL A+ F+ +T L +
Sbjct: 277 VAPYIGLPANASLEEFDKVSKNVDGFSPKPVTLL--ASLFKVQDDVTKLDL 325
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 360 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 409
>gi|294639|gb|AAA16618.1| sulfite oxidase [Rattus norvegicus]
Length = 488
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 91/128 (71%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYGVHL 81
YS D+++H +L++ +WV V+D+T+FV +HPGG+ +M AAGG +EPFWA+Y VH
Sbjct: 28 YSKEDVRSHNNLQTGVWVTLGSEVFDVTKFVDLHPGGQSKLMLAAGGPLEPFWALYAVHN 87
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED +++ ASDPY +P+R P L+ S +P+NAEPPP +L
Sbjct: 88 QPHVRELLAEYKIGELNPED-RMSPPLEASDPYSNDPMRHPALRINSQRPFNAEPPPELL 146
Query: 142 VENFLTPS 149
E+++TP+
Sbjct: 147 TESYITPN 154
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELP+ SAI P +E
Sbjct: 325 GRVSVESEESYSHWQRRDYKGFSPSVDWDTVDFDLAPSIQELPIQSAITQP--QDGTTVE 382
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW A G++ Q P + W W +W+ V
Sbjct: 383 SGEVIIKGYAWSGGGRAVIRVDVSMDGGLTWQEAELEGEE-QHP-RKAWAWRIWQLKAHV 440
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ KE++I+ +D + N PD + ++
Sbjct: 441 PAEQKELNIICKA-------VDDSYNVQPDTVAPIW 469
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V++
Sbjct: 447 LNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVQV 486
Score = 47.8 bits (112), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
L + G ++ ED +++ ASDPY +P+R P L+ S +P+NAEPPP +L S +
Sbjct: 95 LAEYKIGELNPED-RMSPPLEASDPYSNDPMRHPALRINSQRPFNAEPPPELLTESYI 151
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 207 CAGNRRSEMNKVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 249
>gi|74024924|ref|NP_776094.2| sulfite oxidase, mitochondrial precursor [Mus musculus]
gi|152031697|sp|Q8R086.2|SUOX_MOUSE RecName: Full=Sulfite oxidase, mitochondrial; Flags: Precursor
gi|148692648|gb|EDL24595.1| sulfite oxidase [Mus musculus]
gi|211827319|gb|AAH27197.2| Sulfite oxidase [Mus musculus]
Length = 546
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 88/128 (68%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
YS D+++H + K+ +WV V+D+T+FV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 86 YSKEDVRSHNNPKTGVWVTLGSEVFDVTKFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 145
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ EDS ++ ASDPY +P+R P L+ S +P+NAEPPP +L
Sbjct: 146 QPHVRELLAEYKIGELNPEDS-MSPSVEASDPYADDPIRHPALRINSQRPFNAEPPPELL 204
Query: 142 VENFLTPS 149
E ++TP+
Sbjct: 205 TEGYITPN 212
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTV+F +P+IQELP+ SAI P A +E
Sbjct: 383 GRVSVESEESYSHWQRRDYKGFSPSVDWDTVNFDLAPSIQELPIQSAITQPQDGA--IVE 440
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW A G++ Q P + W W +W+ V
Sbjct: 441 SGEVTIKGYAWSGGGRAVIRVDVSVDGGLTWQEAELEGEE-QCP-RKAWAWRIWQLKAQV 498
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ KE++I+ +D + N PD + ++
Sbjct: 499 PAEQKELNIICKA-------VDDSYNVQPDTVAPIW 527
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V++
Sbjct: 505 LNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVQV 544
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
L + G ++ EDS ++ ASDPY +P+R P L+ S +P+NAEPPP +L
Sbjct: 153 LAEYKIGELNPEDS-MSPSVEASDPYADDPIRHPALRINSQRPFNAEPPPELL 204
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 265 CAGNRRSEMSKVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 307
>gi|74143630|dbj|BAE28865.1| unnamed protein product [Mus musculus]
Length = 546
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 88/128 (68%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
YS D+++H + K+ +WV V+D+T+FV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 86 YSKEDVRSHNNPKTGVWVTLGSEVFDVTKFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 145
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ EDS ++ ASDPY +P+R P L+ S +P+NAEPPP +L
Sbjct: 146 QPHVRELLAEYKIGELNPEDS-MSPSVEASDPYADDPIRHPALRINSQRPFNAEPPPELL 204
Query: 142 VENFLTPS 149
E ++TP+
Sbjct: 205 TEGYITPN 212
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTV+F +P+IQELP+ SAI P A +E
Sbjct: 383 GRVSVESEESYSHWQRRDYKGFSPSVDWDTVNFDLAPSIQELPIQSAITQPQDGA--IVE 440
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGG +A++RVDV++D G TW A G++ Q P + W W +W+ V
Sbjct: 441 SGEVTIKGYAWSGGSRAVIRVDVSVDGGLTWQEAELEGEE-QCP-RKAWAWRIWQLKAQV 498
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ KE++I+ +D + N PD + ++
Sbjct: 499 PAEQKELNIICKA-------VDDSYNVQPDTVAPIW 527
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V++
Sbjct: 505 LNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVQV 544
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
L + G ++ EDS ++ ASDPY +P+R P L+ S +P+NAEPPP +L
Sbjct: 153 LAEYKIGELNPEDS-MSPSVEASDPYADDPIRHPALRINSQRPFNAEPPPELL 204
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 265 CAGNRRSEMSKVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 307
>gi|354488167|ref|XP_003506242.1| PREDICTED: sulfite oxidase, mitochondrial [Cricetulus griseus]
gi|344256417|gb|EGW12521.1| Sulfite oxidase, mitochondrial [Cricetulus griseus]
Length = 545
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELP+ SAI P A +E
Sbjct: 382 GRVSVESEESHSHWQRRDYKGFSPSVDWDTVDFDLAPSIQELPIQSAITEPHDGA--TVE 439
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV+ID G TW A G++ Q P + W W LW+ V
Sbjct: 440 SGEVTIKGYAWSGGGRAVIRVDVSIDGGLTWQEAELVGEE-QCP-RKAWAWRLWQLKAQV 497
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
K E++I+ ID + N PD + ++
Sbjct: 498 PAKLNELNIICKA-------IDDSYNVQPDTVAPIW 526
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 92/141 (65%), Gaps = 4/141 (2%)
Query: 10 KLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGG 68
+ RA + S + Y+ D++ H ++ +WV V+D+T+FVQ+HPGG +M AAGG
Sbjct: 74 RCRAAQESSRI--YTKEDVRAHNSPENGVWVTLGSEVFDVTKFVQLHPGGPSKLMLAAGG 131
Query: 69 SIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATS 128
+EPFWA+Y VH Q V ELL Y+IG ++ E ++ ASDPY +PVR P LK S
Sbjct: 132 PLEPFWALYAVHNQAHVRELLAEYKIGELNPE-VDISPTLEASDPYADDPVRHPALKINS 190
Query: 129 LKPYNAEPPPSMLVENFLTPS 149
+P+NAEPPP +L EN++TP+
Sbjct: 191 QRPFNAEPPPELLTENYITPN 211
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KA+D SYN QP++ A IWNLRGVLSNA+HRV V I
Sbjct: 504 LNIICKAIDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVHI 543
Score = 47.4 bits (111), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 203 ASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
ASDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 172 ASDPYADDPVRHPALKINSQRPFNAEPPPELL 203
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 264 CAGNRRSEMSKVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 306
>gi|74185642|dbj|BAE32710.1| unnamed protein product [Mus musculus]
Length = 488
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 88/128 (68%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
YS D+++H + K+ +WV V+D+T+FV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 28 YSKEDVRSHNNPKTGVWVTLGSEVFDVTKFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 87
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ EDS ++ ASDPY +P+R P L+ S +P+NAEPPP +L
Sbjct: 88 QPHVRELLAEYKIGELNPEDS-MSPSVEASDPYADDPIRHPALRINSQRPFNAEPPPELL 146
Query: 142 VENFLTPS 149
E ++TP+
Sbjct: 147 TEGYITPN 154
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGFSPS DWDTV+F +P+IQELP+ SAI P A +E
Sbjct: 325 GRVSVESEESYSHWQRRDYKGFSPSVDWDTVNFDLAPSIQELPIQSAITQPQDGA--IVE 382
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A++RVDV++D G TW A G++ Q P + W W +W+ V
Sbjct: 383 SGEVTIKGYAWSGGGRAVIRVDVSVDGGLTWQEAELEGEE-QCP-RKAWAWRIWQLKAQV 440
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ KE++I+ +D + N PD + ++
Sbjct: 441 PAEQKELNIICKA-------VDDSYNVQPDTVAPIW 469
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V++
Sbjct: 447 LNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVQV 486
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
L + G ++ EDS ++ ASDPY +P+R P L+ S +P+NAEPPP +L
Sbjct: 95 LAEYKIGELNPEDS-MSPSVEASDPYADDPIRHPALRINSQRPFNAEPPPELL 146
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E +VK VKGL W A+ A W GARL DVL AG
Sbjct: 207 CAGNRRSEMSKVKEVKGLEWRTGAISTARWAGARLCDVLAQAG 249
>gi|291236943|ref|XP_002738398.1| PREDICTED: tRNA-nucleotidyltransferase 1, mitochondrial-like
[Saccoglossus kowalevskii]
Length = 418
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 118/234 (50%), Gaps = 58/234 (24%)
Query: 571 KMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG------------------------- 605
K K D+ +F + FTP++ +LA IF+++ Y+LRIAG
Sbjct: 13 KPKFDNHQFRALFTPQMNKLADIFKRYNYELRIAGGAVRDLLGHIMPQDVDLATTATPEE 72
Query: 606 -------------------EGTVTAK--------VLSYRNRREKEDRIGENQPFRKLTLS 638
GT+TA+ V + R + + R E + + L
Sbjct: 73 MKVMFEKEGVRMLNTKGEKHGTITARINDKENFEVTTLRIDKVTDGRHAEVEFTKDWELD 132
Query: 639 VQDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFAR 693
+ +D + LDGT+YD+F G +DL + FVG+ VSRIQEDYLRILRYFRF+ R
Sbjct: 133 AERRDLTINSMFLGLDGTLYDFFGGQQDLAEKKVEFVGNAVSRIQEDYLRILRYFRFYGR 192
Query: 694 ICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
I ++ +NH L AI++N GL +ISGERIW EL KIL G + L+ +YQ
Sbjct: 193 ISDSDDNHNIHTLKAIEDNAAGLADISGERIWMELKKILIGRLAPS-TLRCMYQ 245
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L P D+D AT ATP++MK MF +E VR N KGEKHGT+ AR+NDKENFEV
Sbjct: 49 AVRDLLGHIMPQDVDLATTATPEEMKVMFEKEGVRMLNTKGEKHGTITARINDKENFEVT 108
Query: 435 PVK 437
++
Sbjct: 109 TLR 111
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRID TDGRHAEV+FT+DW+LDA RRDLT+NSMFLG+
Sbjct: 107 VTTLRIDKVTDGRHAEVEFTKDWELDAERRDLTINSMFLGL 147
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI ++ +NH L AI+ N GL +ISGERIW EL KIL G + + M ++
Sbjct: 188 RFYGRISDSDDNHNIHTLKAIEDNAAGLADISGERIWMELKKILIGRLAPSTLRCMYQLR 247
Query: 857 MFPHLG 862
+ ++G
Sbjct: 248 LPQYIG 253
>gi|192856370|gb|ACB58157.1| mitochondrial sulfite oxidase [Capra hircus]
Length = 488
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 95/156 (60%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELP+ SAI P +
Sbjct: 325 GKVSVEPEESFSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPIQSAITQPKEGEIIG-- 382
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ V+GYAWSGGG+A+VRVD ++D G TW VA G++ +A + W W LW P+
Sbjct: 383 SGEVTVKGYAWSGGGRAVVRVDASLDGGLTWQVAELEGEEQRA--RKAWAWRLWHLQAPL 440
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 441 PAGIKELNIVCKA-------VDESYNVQPDTVAPIW 469
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++++H ++ +WV V+DITEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 28 YTREEVKSHCSPETGVWVTLGCEVFDITEFVDIHPGGTSKLMLAAGGPLEPFWALYAVHN 87
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V E+L Y+IG +S +D K + SDPY+ +P+R LK + P+NAEPPP +L
Sbjct: 88 QPHVREILAQYKIGELSPDD-KAPSILKTSDPYMDDPIRHSALKVNTQCPFNAEPPPELL 146
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 147 TENYITPN 154
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVL+NA+HRV V +
Sbjct: 447 LNIVCKAVDESYNVQPDTVAPIWNLRGVLNNAWHRVHVHV 486
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E + K V+GL W A+ A W GARL DVL AG
Sbjct: 207 CAGNRRSEMTQFKEVRGLEWSLGAISTARWAGARLCDVLAQAG 249
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L K+ G +S +D K + SDPY+ +P+R LK + P+NAEPPP +L
Sbjct: 90 HVREILAQYKI--GELSPDD-KAPSILKTSDPYMDDPIRHSALKVNTQCPFNAEPPPELL 146
>gi|194898865|ref|XP_001978983.1| GG10877 [Drosophila erecta]
gi|190650686|gb|EDV47941.1| GG10877 [Drosophila erecta]
Length = 477
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 127/274 (46%), Gaps = 65/274 (23%)
Query: 546 TLQGARLLTRPPNPHSV-------RFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHG 598
T+ + + +R +P + R +S P + K+ +PEF S FTPEL L +F+K+
Sbjct: 29 TMASSMVCSRDASPELIAQMGKQPRTRSNPAFR-KVATPEFQSIFTPELNELVALFKKYD 87
Query: 599 YQLRIAGEGT---------------VTAKVLSYRNRREKED----------------RIG 627
Y+LRIAG TA + EKE+ RI
Sbjct: 88 YELRIAGGAVRDILMGIPPKDIDLATTATPEQMKQMFEKEEVRMINANGEKHGTITPRIN 147
Query: 628 ENQPFRKLTLSVQ------------------DKDRS--------FRLDGTVYDYFNGHED 661
+ + F TL + D +R DGTVYDYF G++D
Sbjct: 148 DKENFEVTTLRIDIRTDGRHAEVMYTTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYDD 207
Query: 662 LKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISG 721
L+ FVG+ RI+ED+LRILRYFRF+ RI + H LSAIK N GL ISG
Sbjct: 208 LQDRRVVFVGEADIRIKEDFLRILRYFRFYGRIASEEGKHDNATLSAIKENGKGLARISG 267
Query: 722 ERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKL 755
ERIW+EL KI+ G+F + L++ NL + L
Sbjct: 268 ERIWSELQKIVVGNFGSALFLELHRCNLFEYIGL 301
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG P DID AT ATP+QMK MF +E+VR N GEKHGT+ R+NDKENFEV
Sbjct: 96 AVRDILMGIPPKDIDLATTATPEQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVT 155
Query: 435 PVK 437
++
Sbjct: 156 TLR 158
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRID+ TDGRHAEV +T DW+LDANRRDLT+NSMFLG
Sbjct: 154 VTTLRIDIRTDGRHAEVMYTTDWQLDANRRDLTINSMFLGF 194
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + H LSAIK+N GL ISGERIW+EL KI+ G+F + L++ N
Sbjct: 235 RFYGRIASEEGKHDNATLSAIKENGKGLARISGERIWSELQKIVVGNFGSALFLELHRCN 294
Query: 857 MFPHLGTDETFATLDFEGLFRSM 879
+F ++G E +F+ L +++
Sbjct: 295 LFEYIGLPEEPYLNEFDRLCKAL 317
>gi|345776536|ref|XP_538224.3| PREDICTED: sulfite oxidase, mitochondrial [Canis lupus familiaris]
Length = 544
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GKV + ES SHWQ+ DYKGFSPS DWDTVDF +P+IQELPV SAI P D + ++
Sbjct: 381 GKVSVEPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEP-KDGE-TVQ 438
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ ++GYAWSGGG+A+VRVDV++D G TW VA G++ + W W LW+ V
Sbjct: 439 SGEVTIKGYAWSGGGRAVVRVDVSLDGGLTWQVAELDGEEPHP--RKAWAWRLWQLQASV 496
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 497 PAGKKELNIVCKA-------VDDSYNVQPDTVAPIW 525
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ +++ H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 84 YTREEVRAHSSPETRIWVTLGCEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 143
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y++G +S ED + SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 144 QPHVRELLAQYKVGELSPEDKEPFTLK-TSDPYSDDPVRHPALKVNSQRPFNAEPPPELL 202
Query: 142 VENFLTPS 149
EN++TP+
Sbjct: 203 TENYITPN 210
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 503 LNIVCKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVRV 542
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 175 HSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 234
H E L KV G +S ED + SDPY +PVR P LK S +P+NAEPPP +L
Sbjct: 146 HVRELLAQYKV--GELSPEDKEPFTLK-TSDPYSDDPVRHPALKVNSQRPFNAEPPPELL 202
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 22/43 (51%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E K VKGL W A+ A W GARL DVL AG
Sbjct: 263 CAGNRRSEMTRFKEVKGLEWNTGAISTARWAGARLCDVLAKAG 305
>gi|327277071|ref|XP_003223289.1| PREDICTED: sulfite oxidase, mitochondrial-like [Anolis
carolinensis]
Length = 567
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
++ +S ES SHWQQ DYKGFSP WDTVDF+K+PAIQ++PV SAI P + +
Sbjct: 403 ARITVSPEESPSHWQQKDYKGFSPGVTWDTVDFSKAPAIQDMPVQSAITEP--SPQTTIS 460
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
++ V+GYAWSGGG+ I+RVDV++D G++W A TG+ Q P R W W LW+ + V
Sbjct: 461 PGELTVKGYAWSGGGRRIIRVDVSLDGGKSWREAELTGE-RQLP-GRAWAWQLWQLNVSV 518
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T+E++++ +D + N PD + ++
Sbjct: 519 PAGTRELNVVCKA-------VDTSYNEQPDTVGPIW 547
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 95/151 (62%), Gaps = 6/151 (3%)
Query: 2 EDGVKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI 61
+ KA + A +P P ++ ++ H S +WV + V+DIT+F++ HPGG+
Sbjct: 91 QKAAKAETPESASDP--QFPTFTRQEVARHHSEASRVWVTYGSDVFDITDFIEQHPGGKS 148
Query: 62 -IMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVR 120
I+ AAGG++EPFWA+Y +H Q+ V E+L+ +++G +S E+ + DPY +P R
Sbjct: 149 KILLAAGGALEPFWALYAMHNQEHVLEILQGFKVGQLSPEEP---PQPTPGDPYADDPPR 205
Query: 121 SPLLKATSLKPYNAEPPPSMLVENFLTPSLL 151
P L+ +LKP+NAEPPP ++ EN+LTP+ L
Sbjct: 206 HPALQTNTLKPFNAEPPPELISENYLTPNQL 236
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 485 SKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
KAVD+SYN QP++ IWN+ GVL+NA+HRV + +
Sbjct: 529 CKAVDTSYNEQPDTVGPIWNILGVLNNAWHRVHLLV 564
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 174 KHSDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSM 233
+H E L+ KV G +S E+ + DPY +P R P L+ +LKP+NAEPPP +
Sbjct: 171 EHVLEILQGFKV--GQLSPEEP---PQPTPGDPYADDPPRHPALQTNTLKPFNAEPPPEL 225
Query: 234 LYSSLL 239
+ + L
Sbjct: 226 ISENYL 231
>gi|387192563|gb|AFJ68663.1| sulfite oxidase [Nannochloropsis gaditana CCMP526]
Length = 579
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 91/135 (67%), Gaps = 9/135 (6%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVH-- 80
Y+ +D+Q HK +++ +WV ++ GVYDIT+F + HPGG I+ AAGG++EP+W +Y VH
Sbjct: 103 YTKADVQAHKTIETGVWVTYKDGVYDITKFAENHPGGNKILMAAGGAVEPYWNLYAVHKD 162
Query: 81 --LQDEVFELLESYRIGNI--SQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEP 136
+Q+ + E+L RIG + S ED K D DPY EP R P K +LKP+NAEP
Sbjct: 163 PEVQETIKEILGELRIGTLKHSPEDEKEVDLD---DPYAHEPERHPAFKINTLKPFNAEP 219
Query: 137 PPSMLVENFLTPSLL 151
P ++LV++F+TP+ L
Sbjct: 220 PGALLVDSFVTPNAL 234
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 6/158 (3%)
Query: 247 TGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKL 306
GKV+ S ES WQQ DYK FSPSTDWD VDF +PAIQ++P+ SAI + +
Sbjct: 405 VGKVVASKSESQGFWQQRDYKNFSPSTDWDNVDFDSAPAIQDMPIQSAIATVEGGLEGEE 464
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFT-GQDSQAPLTRHWGWTLWRATI 365
E + ++GYA+SGGG+ + RVDV+ID G+TW A G +R W W LW +
Sbjct: 465 EGGPLTIKGYAYSGGGRGVARVDVSIDGGKTWEPATIKEGGWKHGDYSRSWTWALWEHFV 524
Query: 366 PVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P + K + ++ D+ + D + N P+ ++A +
Sbjct: 525 P-EEKLEGLTEADICVKA----TDTSYNVQPESIEAYW 557
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+I KA D+SYN QPES WNLRGVL+N + R +V +
Sbjct: 536 DICVKATDTSYNVQPESIEAYWNLRGVLANCWARQKVAL 574
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 418 HGTVCARMNDKEN-----FEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLD 472
H TV A M N EVK VKGL+W A+ NA WTG +L DVL AG+ + +
Sbjct: 276 HHTVTATMQCAGNRRTLIHEVKHVKGLSWTGFAISNAEWTGVKLRDVLLWAGVP--EEYE 333
Query: 473 SADVQHVH 480
+ HVH
Sbjct: 334 RLGLAHVH 341
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 191 SQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
S ED K D DPY EP R P K +LKP+NAEPP ++L S +
Sbjct: 184 SPEDEKEVDLD---DPYAHEPERHPAFKINTLKPFNAEPPGALLVDSFV 229
>gi|351703635|gb|EHB06554.1| Sulfite oxidase, mitochondrial, partial [Heterocephalus glaber]
Length = 544
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 95/156 (60%), Gaps = 11/156 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V + ES SHWQ+ DYKGF PS DWDTVDF +P+IQELPV SAI P A +E
Sbjct: 381 GRVSVEGEESYSHWQRRDYKGFCPSVDWDTVDFDSAPSIQELPVQSAITEP--QAGDTIE 438
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ + V+GYAWSGGG+A++RVDV++D G TW A ++ Q P + W W LW+ PV
Sbjct: 439 SGDVTVKGYAWSGGGRAVIRVDVSLDGGLTWQAAELD-EEEQRP-RKAWAWRLWQLQAPV 496
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
KE++I+ +D + N PD + ++
Sbjct: 497 PAGQKELNIICKA-------VDDSYNVQPDTVAPIW 525
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y H
Sbjct: 84 YTKEEVSSHNSPETGIWVTLGCEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAAHN 143
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
Q V ELL Y+IG ++ ED+ ++ SDPY +P R P LK S +P+NAEPPP +L
Sbjct: 144 QPHVCELLTKYKIGELNPEDN-VSPTLETSDPYAGDPKRHPALKVNSQRPFNAEPPPELL 202
Query: 142 VENFLTPS 149
E+++TP+
Sbjct: 203 TESYITPN 210
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ I KAVD SYN QP++ A IWNLRGVLSNA+HRV V +
Sbjct: 503 LNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVHV 542
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 182 LVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
L K G ++ ED+ ++ SDPY +P R P LK S +P+NAEPPP +L S +
Sbjct: 151 LTKYKIGELNPEDN-VSPTLETSDPYAGDPKRHPALKVNSQRPFNAEPPPELLTESYI 207
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
CA E ++K VKGL W A+ A W GARL +VL AG
Sbjct: 263 CAGNRRSEMTQIKEVKGLEWRTGAISTAHWAGARLCEVLAQAG 305
>gi|357630059|gb|EHJ78450.1| hypothetical protein KGM_16292 [Danaus plexippus]
Length = 421
Score = 132 bits (333), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 120/249 (48%), Gaps = 57/249 (22%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQ------------------------------- 600
+KLD+ EFH+ FTPE+ L +FEK+ Y+
Sbjct: 12 LKLDTAEFHNIFTPEVIDLKKLFEKYQYEIRIAGGAVRDLLLGQPAKDLDFATTATPQQM 71
Query: 601 -----------LRIAGE--GTVTAK--------VLSYRNRREKEDRIGENQPFRKLTLSV 639
+ ++GE GT+T + V + R + R E + + L
Sbjct: 72 KEMFTAENVRMINMSGEKHGTITPRINDKENFEVTTLRVDIVTDGRHAEVEFTKDWKLDA 131
Query: 640 QDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+D + DG+VYDYF G+EDL K AFVGDP RI+ED+LRI+RYFRF+ RI
Sbjct: 132 NRRDLTINSMFLGFDGSVYDYFYGYEDLMKRKVAFVGDPDIRIKEDFLRIMRYFRFYGRI 191
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSK 754
P+NH L IK N +GL +SGERIW EL K L G+F+ +++ ML ++ +
Sbjct: 192 SEKPDNHDRHTLDVIKQNAEGLQGVSGERIWMELKKTLQGNFAGDLLKTMLKLDIGKYIG 251
Query: 755 LKATTMREY 763
L + E+
Sbjct: 252 LPKPNLEEF 260
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 39/40 (97%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLR+D+ TDGRHAEV+FT+DWKLDANRRDLT+NSMFLG
Sbjct: 105 VTTLRVDIVTDGRHAEVEFTKDWKLDANRRDLTINSMFLG 144
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L+G+ D+DFAT ATP QMK MF E VR N GEKHGT+ R+NDKENFEV
Sbjct: 47 AVRDLLLGQPAKDLDFATTATPQQMKEMFTAENVRMINMSGEKHGTITPRINDKENFEVT 106
Query: 435 PVK 437
++
Sbjct: 107 TLR 109
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P+NH L IK+N +GL +SGERIW EL K L G+F+ +++ ML+++
Sbjct: 186 RFYGRISEKPDNHDRHTLDVIKQNAEGLQGVSGERIWMELKKTLQGNFAGDLLKTMLKLD 245
Query: 857 MFPHLGTDETFATLDFEGLFR 877
+ ++G + +FEGL +
Sbjct: 246 IGKYIGLPKPNLE-EFEGLLK 265
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 35/52 (67%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
Y+ L+L +K+K +Y+ E++KY+ +L+ F+KW +P FPM G ++++
Sbjct: 324 YEKLVLNTKIKQKDAVDYVREVLKYRGDEKLLDMFNKWEVPRFPMTGKLLKE 375
>gi|307109045|gb|EFN57284.1| hypothetical protein CHLNCDRAFT_30609 [Chlorella variabilis]
Length = 553
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 95/156 (60%), Gaps = 10/156 (6%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
GK++ SD ES S WQ+ DYK FSPS DW VD+ +PAIQ +PV S IC P++ A ++
Sbjct: 390 GKIVASDQESASFWQRKDYKAFSPSVDWHNVDWESAPAIQNMPVTSHICEPLSGA--AID 447
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ ++ V+GYAWSGGG+ I+RVDV+ D G TWH A + R W W LW AT+P+
Sbjct: 448 DDEVTVKGYAWSGGGQGIIRVDVSADGGATWHTAELNKVPQK--RGRGWAWALWEATVPL 505
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
PK + ++ L+ K D + N P+Q ++
Sbjct: 506 -PKGAKGAV--QLVAKA---TDESYNTQPEQAAPIW 535
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYGVHL 81
+ ++ H+ ++ IWV ++ GVYD+T+FV+ HPGG +M AAGG+I+PFWAMY H
Sbjct: 95 FDKEEVAKHRTKETGIWVTYKDGVYDVTKFVEQHPGGAARLMLAAGGAIDPFWAMYQQHN 154
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
D+V +LE YRIG + K A +DPY EP R P L S KP N+E P +L
Sbjct: 155 NDQVKGMLEEYRIGRL-----KGGAAAPVADPYANEPARLPALIVRSQKPMNSETPKELL 209
Query: 142 VENFLTPSLL 151
V + +TP+ L
Sbjct: 210 VGSLITPNEL 219
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 436 VKGLTWGH----------AAVGNATWTGARLVDVLKAAGISPDQSLDSADV-----QHVH 480
VKG W +A G ATW A L V + G +L A V
Sbjct: 453 VKGYAWSGGGQGIIRVDVSADGGATWHTAELNKVPQKRGRGWAWALWEATVPLPKGAKGA 512
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
V++ +KA D SYNTQPE A IWNLRGV N++HRV V +
Sbjct: 513 VQLVAKATDESYNTQPEQAAPIWNLRGVNCNSWHRVSVNV 552
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 424 RMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVE 482
R ND N +PVKGL W ++ A W+G RL DVL AAG+ D+ DV H+ E
Sbjct: 274 RRNDF-NLTQRPVKGLEWDGGSISTAVWSGVRLRDVLLAAGLED----DNPDVAHIQFE 327
>gi|4929563|gb|AAD34042.1|AF151805_1 CGI-47 protein [Homo sapiens]
gi|15214805|gb|AAH12537.1| TRNT1 protein [Homo sapiens]
Length = 405
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 102/220 (46%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 1 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 60
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 61 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 120
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 121 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 180
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 181 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 220
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 93 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 133
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 36 AVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 94
Query: 435 PVK 437
++
Sbjct: 95 TLR 97
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 174 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 233
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 234 VAPYIGLPANASLEEFDKVSKNVDGFSPKPVTLL--ASLFKVQDDVTKL 280
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 317 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 366
>gi|403270422|ref|XP_003927181.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial
[Saimiri boliviensis boliviensis]
Length = 434
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 102/220 (46%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPIQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGQAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDPETLEAIAENATGLAGISGERIWVELKKILVGN 249
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPIQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENATGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ PH+G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPHIGLPANASLEEFDKVSKNVEGFSPKPMTLL--ASLFKVQDDVTKL 309
>gi|296225724|ref|XP_002758621.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial
[Callithrix jacchus]
Length = 434
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 102/220 (46%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPIQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKIRFVGQAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPIQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ ++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VASYIGLPANASLEEFDKVSKNVEGFSPKPMTLL--ASLFKVQDDVTKL 309
>gi|296452848|sp|Q96Q11.2|TRNT1_HUMAN RecName: Full=CCA tRNA nucleotidyltransferase 1, mitochondrial;
AltName: Full=Mitochondrial tRNA nucleotidyl
transferase, CCA-adding; AltName: Full=mt CCA-adding
enzyme; AltName: Full=mt tRNA CCA-diphosphorylase;
AltName: Full=mt tRNA CCA-pyrophosphorylase; AltName:
Full=mt tRNA adenylyltransferase; Flags: Precursor
Length = 434
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 102/220 (46%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPYIGLPANASLEEFDKVSKNVDGFSPKPVTLL--ASLFKVQDDVTKL 309
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 395
>gi|155030240|ref|NP_886552.2| CCA tRNA nucleotidyltransferase 1, mitochondrial [Homo sapiens]
gi|16416451|dbj|BAB70662.1| tRNA-nucleotidyltransferase [Homo sapiens]
gi|119584290|gb|EAW63886.1| tRNA nucleotidyl transferase, CCA-adding, 1, isoform CRA_b [Homo
sapiens]
gi|119584293|gb|EAW63889.1| tRNA nucleotidyl transferase, CCA-adding, 1, isoform CRA_b [Homo
sapiens]
gi|158261845|dbj|BAF83100.1| unnamed protein product [Homo sapiens]
gi|168278132|dbj|BAG11044.1| tRNA-nucleotidyltransferase 1 [synthetic construct]
gi|190690285|gb|ACE86917.1| tRNA nucleotidyl transferase, CCA-adding, 1 protein [synthetic
construct]
gi|190691659|gb|ACE87604.1| tRNA nucleotidyl transferase, CCA-adding, 1 protein [synthetic
construct]
Length = 434
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 102/220 (46%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPYIGLPANASLEEFDKVSKNVDGFSPKPVTLL--ASLFKVQDDVTKL 309
Score = 40.0 bits (92), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 395
>gi|114585221|ref|XP_001140902.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform
3 [Pan troglodytes]
gi|410209856|gb|JAA02147.1| tRNA nucleotidyl transferase, CCA-adding, 1 [Pan troglodytes]
gi|410247990|gb|JAA11962.1| tRNA nucleotidyl transferase, CCA-adding, 1 [Pan troglodytes]
gi|410328855|gb|JAA33374.1| tRNA nucleotidyl transferase, CCA-adding, 1 [Pan troglodytes]
Length = 434
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 102/220 (46%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFASTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFA+ ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDIDFASTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPYIGLPANASLEEFDKVSKNVDGFSPKPMTLL--ASLFKVQDDVTKL 309
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 395
>gi|114585223|ref|XP_001140831.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform
2 [Pan troglodytes]
Length = 414
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 101/219 (46%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFASTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVG 248
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFA+ ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDIDFASTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGG 842
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVG 248
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 326 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 375
>gi|21740087|emb|CAD39059.1| hypothetical protein [Homo sapiens]
gi|117646864|emb|CAL37547.1| hypothetical protein [synthetic construct]
gi|119584291|gb|EAW63887.1| tRNA nucleotidyl transferase, CCA-adding, 1, isoform CRA_c [Homo
sapiens]
Length = 414
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 101/219 (46%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVG 248
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGG 842
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVG 248
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 326 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 375
>gi|297670812|ref|XP_002813549.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform
2 [Pongo abelii]
Length = 434
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 102/220 (46%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPYIGLPANASLEEFDKVSKNVEGFSPKPMTLL--ASLFKVQDDVTKL 309
>gi|332231563|ref|XP_003264964.1| PREDICTED: uncharacterized protein LOC100585151 [Nomascus
leucogenys]
Length = 434
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 102/220 (46%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPSQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPSQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPYIGLPANASLEEFDKVSKNVEGFSPKPMTLL--ASLFKVQDDVTKL 309
Score = 40.0 bits (92), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 395
>gi|397522443|ref|XP_003831276.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform
1 [Pan paniscus]
Length = 434
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 102/220 (46%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPYIGLPANASLEEFDKVSKNVDGFSPKPMTLL--ASLFKVQDDVTKL 309
>gi|426339236|ref|XP_004033564.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform
1 [Gorilla gorilla gorilla]
Length = 434
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 103/221 (46%), Gaps = 58/221 (26%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
MKL SPEF S FT LK L +F K ++LRIAG G V
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAG-GAVRDLLNGVKPQDIDFATTATPTQ 88
Query: 610 ------TAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDK 642
+A + NR EK I EN L + V +D
Sbjct: 89 MKDMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDA 148
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 149 ERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRI 208
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 209 VDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDIDFATTATPTQMKDMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPYIGLPANASLEEFDKVSKNVDGFSPKPMTLL--ASLFKVQDDVTKL 309
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 395
>gi|426339238|ref|XP_004033565.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform
2 [Gorilla gorilla gorilla]
Length = 414
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 102/220 (46%), Gaps = 58/220 (26%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
MKL SPEF S FT LK L +F K ++LRIAG G V
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAG-GAVRDLLNGVKPQDIDFATTATPTQ 88
Query: 610 ------TAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDK 642
+A + NR EK I EN L + V +D
Sbjct: 89 MKDMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDA 148
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 149 ERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRI 208
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 209 VDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVG 248
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDIDFATTATPTQMKDMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGG 842
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVG 248
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 326 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 375
>gi|397522445|ref|XP_003831277.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform
2 [Pan paniscus]
Length = 414
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 101/219 (46%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVG 248
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGG 842
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVG 248
>gi|301102364|ref|XP_002900269.1| sulfite oxidase, putative [Phytophthora infestans T30-4]
gi|262102010|gb|EEY60062.1| sulfite oxidase, putative [Phytophthora infestans T30-4]
Length = 592
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 14 GEPISTLPWYSLSDIQNHKDL-KSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEP 72
G+ S LP +S ++Q H K+ WVV++ GVYDIT+F+ HPGG I+ AAG SIEP
Sbjct: 76 GKVRSDLPTFSFDEVQQHTGAHKNGTWVVYKYGVYDITKFIASHPGGTKILLAAGSSIEP 135
Query: 73 FWAMYGVHLQDEVFELLESYRIGNISQED----SKLAAKDIASDPYVMEPVRSPLLKATS 128
FW +Y H +V ++LE RIGN+ +ED K+ + PY +P R P LK S
Sbjct: 136 FWQLYAAHNHADVHKILEKLRIGNLREEDVAMLEKVRKERYGDGPYGKDPTRHPALKVNS 195
Query: 129 LKPYNAEPPPSMLVENFLTPSLL 151
P+NAEPP +L+++F+TP+ L
Sbjct: 196 SMPFNAEPPAELLMQSFITPNDL 218
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 89/164 (54%), Gaps = 19/164 (11%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAK--SPAIQELPVISAICLP-------V 299
+V+LS ES S WQQ DYKGF P+ D+ D+ K +IQELPV SAI P V
Sbjct: 413 RVVLSSEESPSFWQQRDYKGFPPNVDYSRDDYWKFAGDSIQELPVQSAITEPKNGSIHLV 472
Query: 300 ADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
DA ++ + V+GYAWSGGG+ I+RVD+++D G+TW A + R W WT
Sbjct: 473 DDAS---DSSIVTVKGYAWSGGGRNIIRVDISVDGGKTWTPAELHESGKRQKYNRAWAWT 529
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
W + V P T+++ IM +D + N PD + ++
Sbjct: 530 PWELDVDVPPGTEKLDIMCKA-------VDASYNVQPDTIAPIW 566
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
++I KAVD+SYN QP++ A IWN+RGVL+NA+HRV V +
Sbjct: 544 LDIMCKAVDASYNVQPDTIAPIWNMRGVLNNAWHRVHVTV 583
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 171 SSFKHSDEKLKLVKVMAGNISQED----SKLAAKDIASDPYVMEPVRSPLLKATSLKPYN 226
++ H+D L K+ GN+ +ED K+ + PY +P R P LK S P+N
Sbjct: 141 AAHNHADVHKILEKLRIGNLREEDVAMLEKVRKERYGDGPYGKDPTRHPALKVNSSMPFN 200
Query: 227 AEPPPSMLYSSLL 239
AEPP +L S +
Sbjct: 201 AEPPAELLMQSFI 213
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMN 426
VD + I + +G++ H I+F T D +K+ F V T + CA
Sbjct: 230 VDIANYTLKISGLGIGREKH-IEF----TLDDLKSKFKHHTVTTTVQ--------CAGNR 276
Query: 427 DKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS 470
E VK V GL+W A+ A WTG L DVL + GI+ + S
Sbjct: 277 RAEMSGVKQVNGLSWDTTALSTANWTGVLLSDVLASIGITDEDS 320
>gi|417400843|gb|JAA47344.1| Putative trna nucleotidyltransferase/polya polymerase [Desmodus
rotundus]
Length = 432
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 102/221 (46%), Gaps = 58/221 (26%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
MKL SPEF S FT LK L +F K ++LRIAG G V
Sbjct: 28 MKLQSPEFQSLFTEGLKGLTELFVKENHELRIAG-GAVRDLLNGVKPQDVDFATTATPEQ 86
Query: 610 ------TAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDK 642
A + N+ EK I N+ F TL + +D
Sbjct: 87 MKGLFQAAGIRMVNNKGEKHGTITARLHNENFEITTLRIDVVTDGRHAEVEFTTDWQKDA 146
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R DGT+YDYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 147 ERRDLTINSMFLGFDGTLYDYFNGYEDLKNKKVRFVGHAKKRIQEDYLRILRYFRFYGRI 206
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P H E L AI N GL +SGERIW EL K+L G+
Sbjct: 207 VDTPGAHDPETLEAIAENAKGLAGVSGERIWVELKKVLVGN 247
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP+QMK +F +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 63 AVRDLLNGVKPQDVDFATTATPEQMKGLFQAAGIRMVNNKGEKHGTITARLHN-ENFEIT 121
Query: 435 PVK 437
++
Sbjct: 122 TLR 124
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 120 ITTLRIDVVTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 160
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P H E L AI +N GL +SGERIW EL K+L G+ ++ + +++
Sbjct: 201 RFYGRIVDTPGAHDPETLEAIAENAKGLAGVSGERIWVELKKVLVGNHVNHLIHLIYDLD 260
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 261 VAPYIGLPASASLGEFDKVSKNVEGFSPKPMTLL--ASLFKAQDDVTKL 307
>gi|50344974|ref|NP_001002159.1| tRNA-nucleotidyltransferase 1, mitochondrial [Danio rerio]
gi|47939337|gb|AAH71337.1| TRNA nucleotidyl transferase, CCA-adding, 1 [Danio rerio]
Length = 405
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 112/233 (48%), Gaps = 59/233 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
M+L + EF S FT L LA IF+K+ ++LRIAG G V
Sbjct: 1 MQLKTKEFESLFTDGLVGLAEIFQKNQFELRIAG-GAVRDLLSGKRPEDVDFATTATPEE 59
Query: 610 ------TAKVLSYRNRREKEDRIG-----ENQPFRKLTLSVQ--------------DKDR 644
TA V N+ EK I EN L + VQ KD
Sbjct: 60 MKTMFQTAGVRMINNKGEKHGTITARLHEENFEVTTLRVDVQTDGRHAEVEFTTDWQKDA 119
Query: 645 SFR----------LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
R LDGT+YDYF G+EDLK FVG RIQEDYLRILRYFRF+ R+
Sbjct: 120 ERRDLTINSMFLGLDGTLYDYFQGYEDLKNRKVRFVGSASLRIQEDYLRILRYFRFYGRV 179
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
P H+ E L AI+ N GL ISGERIW EL K+L G+ + +L+++Y+
Sbjct: 180 AAEPGQHEPETLEAIRENARGLAGISGERIWVELKKMLVGNHAGH-LLELVYE 231
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+P D+DFAT ATP++MK MF VR N KGEKHGT+ AR+++ ENFEV
Sbjct: 36 AVRDLLSGKRPEDVDFATTATPEEMKTMFQTAGVRMINNKGEKHGTITARLHE-ENFEVT 94
Query: 435 PVK 437
++
Sbjct: 95 TLR 97
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG+
Sbjct: 93 VTTLRVDVQTDGRHAEVEFTTDWQKDAERRDLTINSMFLGL 133
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ P H+ E L AI++N GL ISGERIW EL K+L G+ + ++ + E+
Sbjct: 174 RFYGRVAAEPGQHEPETLEAIRENARGLAGISGERIWVELKKMLVGNHAGHLLELVYELG 233
Query: 857 MFPHLGTDETFATLDFEGLFR----SMPIPFTLLFSANFFRNLARITTL 901
+ + G + + +++ S P P T+L A FR A + L
Sbjct: 234 LAQYTGLPADGDVEEMKQVWQRAHVSSPKPMTVL--AALFRKQADVEKL 280
>gi|49618903|gb|AAT68036.1| tRNA nucleotidyl transferase-like [Danio rerio]
Length = 405
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 112/233 (48%), Gaps = 59/233 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
M+L + EF S FT L LA IF+K+ ++LRIAG G V
Sbjct: 1 MQLKTKEFESLFTDGLVGLAEIFQKNQFELRIAG-GAVRDLLSGKRPEDVDFATTATPEE 59
Query: 610 ------TAKVLSYRNRREKEDRIG-----ENQPFRKLTLSVQ--------------DKDR 644
TA V N+ EK I EN L + VQ KD
Sbjct: 60 MKSMFQTAGVRMINNKGEKHGTITARLHEENFEVTTLRVDVQTDGRHAEVEFTTDWQKDA 119
Query: 645 SFR----------LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
R LDGT+YDYF G+EDLK FVG RIQEDYLRILRYFRF+ R+
Sbjct: 120 ERRDLTINSMFLGLDGTLYDYFQGYEDLKNRKVRFVGSASLRIQEDYLRILRYFRFYGRV 179
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
P H+ E L AI+ N GL ISGERIW EL K+L G+ + +L+++Y+
Sbjct: 180 AAEPGQHEPETLEAIRENARGLAGISGERIWVELKKMLVGNHAGH-LLELVYE 231
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+P D+DFAT ATP++MK+MF VR N KGEKHGT+ AR+++ ENFEV
Sbjct: 36 AVRDLLSGKRPEDVDFATTATPEEMKSMFQTAGVRMINNKGEKHGTITARLHE-ENFEVT 94
Query: 435 PVK 437
++
Sbjct: 95 TLR 97
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG+
Sbjct: 93 VTTLRVDVQTDGRHAEVEFTTDWQKDAERRDLTINSMFLGL 133
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ P H+ E L AI++N GL ISGERIW EL K+L G+ + ++ + E+
Sbjct: 174 RFYGRVAAEPGQHEPETLEAIRENARGLAGISGERIWVELKKMLVGNHAGHLLELVYELG 233
Query: 857 MFPHLGTDETFATLDFEGLFR----SMPIPFTLLFSANFFRNLARITTL 901
+ + G + + +++ S P P T+L A FR A + L
Sbjct: 234 LAQYTGLPADGDVEEMKQVWQRAHVSSPKPMTVL--AALFRKQADVENL 280
>gi|348510487|ref|XP_003442777.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Oreochromis niloticus]
Length = 427
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 115/232 (49%), Gaps = 59/232 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
M+L + EF S FT L LA +FEKH ++LRIAG G V
Sbjct: 24 MQLKTSEFQSLFTDGLNGLAEVFEKHQHELRIAG-GAVRDLLSGKRPEDVDFATTATPEE 82
Query: 610 ------TAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDK 642
TA + N+ EK I N+ F TL V +D
Sbjct: 83 MKHMFQTAGIRMINNKGEKHGTITARLHNENFEVTTLRVDVQTDGRHAEVEFTTDWQKDA 142
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R LDGT+YDY+ G+EDL+ FVG RI+EDYLRILRYFRF+ R+
Sbjct: 143 ERRDLTINSMFLALDGTLYDYYRGYEDLQNRKVRFVGSAEQRIKEDYLRILRYFRFYGRV 202
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
+ P +H+ E L+AI+ N GL ISGERIW EL K++ G+ + +L+++Y
Sbjct: 203 ASEPGDHEPETLTAIRENGHGLAAISGERIWVELKKLVVGNHAAH-LLELIY 253
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+P D+DFAT ATP++MK MF +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 59 AVRDLLSGKRPEDVDFATTATPEEMKHMFQTAGIRMINNKGEKHGTITARLHN-ENFEVT 117
Query: 435 PVK 437
++
Sbjct: 118 TLR 120
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHAEV+FT DW+ DA RRDLT+NSMFL +
Sbjct: 116 VTTLRVDVQTDGRHAEVEFTTDWQKDAERRDLTINSMFLAL 156
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ + P +H+ E L+AI++N GL ISGERIW EL K++ G+ + ++ + +
Sbjct: 197 RFYGRVASEPGDHEPETLTAIRENGHGLAAISGERIWVELKKLVVGNHAAHLLELIYSLE 256
Query: 857 MFPHLG 862
+ ++G
Sbjct: 257 LAQYIG 262
>gi|410920706|ref|XP_003973824.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Takifugu rubripes]
Length = 421
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 115/232 (49%), Gaps = 59/232 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
M+L + EF S FT L LA +F KH ++LRIAG G V
Sbjct: 18 MQLKTSEFQSLFTDGLNGLAELFGKHQHELRIAG-GAVRDLLSGKRPEDVDFATTATPEE 76
Query: 610 ------TAKVLSYRNRREKEDRI-----GENQPFRKLTLSVQ--------------DKDR 644
+A + N+ EK I EN L + VQ KD
Sbjct: 77 MKRMFQSAGIRMINNKGEKHGTITARLHDENFEVTTLRVDVQTDGRHAEVEFTTDWQKDA 136
Query: 645 SFR----------LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
R LDGT+YDYF G+EDL+K FVG V RIQEDYLRILRYFRF+ R+
Sbjct: 137 ERRDLTINSMFLALDGTLYDYFQGYEDLQKRKVRFVGSAVERIQEDYLRILRYFRFYGRV 196
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
+P +H+ E L AI+ N GL +ISGERIW EL K++ G+ + +L+++Y
Sbjct: 197 ALDPGDHEPETLKAIRENGCGLASISGERIWVELKKMVVGNHAAH-LLELMY 247
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+P D+DFAT ATP++MK MF +R N KGEKHGT+ AR++D ENFEV
Sbjct: 53 AVRDLLSGKRPEDVDFATTATPEEMKRMFQSAGIRMINNKGEKHGTITARLHD-ENFEVT 111
Query: 435 PVK 437
++
Sbjct: 112 TLR 114
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHAEV+FT DW+ DA RRDLT+NSMFL +
Sbjct: 110 VTTLRVDVQTDGRHAEVEFTTDWQKDAERRDLTINSMFLAL 150
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ +P +H+ E L AI++N GL +ISGERIW EL K++ G+ + ++ M +
Sbjct: 191 RFYGRVALDPGDHEPETLKAIRENGCGLASISGERIWVELKKMVVGNHAAHLLELMYSLE 250
Query: 857 MFPHLGTDETFATLDFEGLFRS----MPIPFTLLFS 888
+ ++G + + + ++R+ P P T+L S
Sbjct: 251 LAQYMGLPQDGDIEEMKRVWRNANEHAPKPMTILAS 286
>gi|109035906|ref|XP_001100764.1| PREDICTED: tRNA-nucleotidyltransferase 1, mitochondrial isoform 2
[Macaca mulatta]
gi|355559493|gb|EHH16221.1| tRNA-nucleotidyltransferase 1, mitochondrial [Macaca mulatta]
gi|355746561|gb|EHH51175.1| tRNA-nucleotidyltransferase 1, mitochondrial [Macaca fascicularis]
Length = 439
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 102/220 (46%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKNLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + N+ EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDAETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDAETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPYIGLPANASLEEFDKVSKNVEGFSPKPMTLL--ASLFKVQDDVTKL 309
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 395
>gi|166158076|ref|NP_001107446.1| uncharacterized protein LOC100135294 [Xenopus (Silurana)
tropicalis]
gi|156230028|gb|AAI52184.1| TRNA nucleotidyl transferase, CCA-adding, 1 [Danio rerio]
gi|163915741|gb|AAI57591.1| LOC100135294 protein [Xenopus (Silurana) tropicalis]
Length = 405
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 111/233 (47%), Gaps = 59/233 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
M+L + EF S FT L LA IF+K ++LRIAG G V
Sbjct: 1 MQLKTKEFESLFTDGLVGLAEIFQKSQFELRIAG-GAVRDLLSGKRPEDVDFATTATPEE 59
Query: 610 ------TAKVLSYRNRREKEDRIG-----ENQPFRKLTLSVQ--------------DKDR 644
TA V N+ EK I EN L + VQ KD
Sbjct: 60 MKSMFQTAGVRMINNKGEKHGTITARLHEENFEVTTLRVDVQTDGRHAEVEFTTDWQKDA 119
Query: 645 SFR----------LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
R LDGT+YDYF G+EDLK FVG RIQEDYLRILRYFRF+ R+
Sbjct: 120 ERRDLTINSMFLGLDGTLYDYFQGYEDLKNRKVRFVGSASLRIQEDYLRILRYFRFYGRV 179
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
P H+ E L AI+ N GL ISGERIW EL K+L G+ + +L+++Y+
Sbjct: 180 AAEPGQHEPETLEAIRENARGLAGISGERIWVELKKMLVGNHAGH-LLELVYE 231
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+P D+DFAT ATP++MK+MF VR N KGEKHGT+ AR+++ ENFEV
Sbjct: 36 AVRDLLSGKRPEDVDFATTATPEEMKSMFQTAGVRMINNKGEKHGTITARLHE-ENFEVT 94
Query: 435 PVK 437
++
Sbjct: 95 TLR 97
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG+
Sbjct: 93 VTTLRVDVQTDGRHAEVEFTTDWQKDAERRDLTINSMFLGL 133
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ P H+ E L AI++N GL ISGERIW EL K+L G+ + ++ + E+
Sbjct: 174 RFYGRVAAEPGQHEPETLEAIRENARGLAGISGERIWVELKKMLVGNHAGHLLELVYELG 233
Query: 857 MFPHLGTDETFATLDFEGLFR----SMPIPFTLLFSANFFRNLARITTL 901
+ + G + + +++ S P P T+L A FR A + L
Sbjct: 234 LAQYTGLPADGDVEEMKQVWQRAHVSSPKPMTVL--AALFRKQADVENL 280
>gi|354473092|ref|XP_003498770.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial
[Cricetulus griseus]
gi|344235924|gb|EGV92027.1| tRNA-nucleotidyltransferase 1, mitochondrial [Cricetulus griseus]
Length = 434
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 100/219 (45%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDKD 643
E +A V N+ EK I + F TL + +D +
Sbjct: 90 KEMFQSAGVRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+ DLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 210 DKPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTG 248
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 VTTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF VR N KGEKHGT+ AR+++ ENFEV
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGVRMINNKGEKHGTITARLHE-ENFEVT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ PH+G +F + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPHIGLPSNSNLEEFNKVSKNVEGFSPKPMTLL--ASLFKVQDDVTKL 309
>gi|348575439|ref|XP_003473496.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Cavia porcellus]
Length = 434
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 101/220 (45%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF + FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQALFTEGLKSLTELFVKQNHELRIAGGAVRDLLNGVKPQDVDFATTATPAQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E A + NR EK + EN L + V +D +
Sbjct: 90 KEMFQAAGIRMINNRGEKHGTVTARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+ DLK FVG+ RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYTDLKNKKVRFVGNAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDSETLEAIAQNAQGLGGISGERIWVELKKILTGN 249
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N +GEKHGTV AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPAQMKEMFQAAGIRMINNRGEKHGTVTARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDSETLEAIAQNAQGLGGISGERIWVELKKILTGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F + ++ P P TLL A+ F+ +T L
Sbjct: 263 VAPYIGLPANASLGEFNKVSKNADGFSPKPMTLL--ASLFKVQDDVTKL 309
>gi|33859692|ref|NP_081572.1| CCA tRNA nucleotidyltransferase 1, mitochondrial isoform a [Mus
musculus]
gi|334358907|ref|NP_001229287.1| CCA tRNA nucleotidyltransferase 1, mitochondrial isoform a [Mus
musculus]
gi|37537798|sp|Q8K1J6.1|TRNT1_MOUSE RecName: Full=CCA tRNA nucleotidyltransferase 1, mitochondrial;
AltName: Full=mitochondrial tRNA nucleotidyl
transferase, CCA-adding; Short=mt CCA-adding enzyme;
Short=mt tRNA CCA-diphosphorylase; Short=mt tRNA
CCA-pyrophosphorylase; Short=mt tRNA
adenylyltransferase; Flags: Precursor
gi|21619331|gb|AAH31764.1| TRNA nucleotidyl transferase, CCA-adding, 1 [Mus musculus]
gi|74177896|dbj|BAE39032.1| unnamed protein product [Mus musculus]
gi|74220479|dbj|BAE31459.1| unnamed protein product [Mus musculus]
gi|148666980|gb|EDK99396.1| tRNA nucleotidyl transferase, CCA-adding, 1, isoform CRA_a [Mus
musculus]
Length = 434
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 100/219 (45%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDKD 643
E +A + N+ EK I + F TL + +D +
Sbjct: 90 KEMFQSAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+ DLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 210 DRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTG 248
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 VTTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEVT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G ++ + ++
Sbjct: 203 RFYGRIVDRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLG 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ PH+G +F + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPHIGLPANANLEEFNKVSKNVEGFSPKPMTLL--ASLFKVQDDVTKL 309
Score = 39.7 bits (91), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFVIDSREPDATAR--VCELLKYQGEHGLLKEMQQWSVPPFPVSGHDIRK 395
>gi|344276484|ref|XP_003410038.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial
[Loxodonta africana]
Length = 434
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 101/220 (45%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPSQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + N+ EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVLTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTVNSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 EKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLTVNSMFLG
Sbjct: 122 ITTLRIDVLTDGRHAEVEFTTDWQKDAERRDLTVNSMFLGF 162
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPSQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P +H E L AI +N GL ISGERIW EL KIL G+ ++ M +++
Sbjct: 203 RFYGRIVEKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLMYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G +F+ + +++ P TLL A+ FR IT L
Sbjct: 263 VAPYIGLPANANLEEFKKVSKNVEGFSSKPMTLL--ASLFRVQDDITKL 309
Score = 39.7 bits (91), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 395
>gi|345786230|ref|XP_533758.3| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial [Canis
lupus familiaris]
Length = 436
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 104/221 (47%), Gaps = 58/221 (26%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
MKL SPEF S FT LK L +F K ++LRIAG G V
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAG-GAVRDLLNGVKPQDVDFATTATPAQ 88
Query: 610 ------TAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDK 642
+A + N+ EK I EN L + V +D
Sbjct: 89 MKDMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVVTDGRHAEVEFTTDWQKDA 148
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R DGT++DYFNG+EDLK FVG+ RIQEDYLRILRYFRF+ +I
Sbjct: 149 ERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGNAKQRIQEDYLRILRYFRFYGKI 208
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 209 IDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVVTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPAQMKDMFQSAGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ +I + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGKIIDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITT--LRIDVTTDGR 910
+ P++G + +F + +++ P P TLL A+ F+ +T LR+ ++ + +
Sbjct: 263 VAPYIGLPTNSSLEEFNKVSKNVDGFSPKPMTLL--ASLFKVQDDVTKLDLRLKISKEEK 320
Query: 911 HAEVQFTEDWKLDANRRDLT 930
+ + + NR+DL
Sbjct: 321 NLGIFIVK------NRKDLV 334
>gi|148666981|gb|EDK99397.1| tRNA nucleotidyl transferase, CCA-adding, 1, isoform CRA_b [Mus
musculus]
Length = 440
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 100/219 (45%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 36 MKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQM 95
Query: 606 -EGTVTAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDKD 643
E +A + N+ EK I + F TL + +D +
Sbjct: 96 KEMFQSAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGRHAEVEFTTDWQKDAE 155
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+ DLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 156 RRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 215
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 216 DRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTG 254
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 128 VTTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 168
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 71 AVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEVT 129
Query: 435 PVK 437
++
Sbjct: 130 TLR 132
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G ++ + ++
Sbjct: 209 RFYGRIVDRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLG 268
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ PH+G +F + +++ P P TLL A+ F+ +T L
Sbjct: 269 VAPHIGLPANANLEEFNKVSKNVEGFSPKPMTLL--ASLFKVQDDVTKL 315
Score = 39.7 bits (91), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 352 YQDFVIDSREPDATAR--VCELLKYQGEHGLLKEMQQWSVPPFPVSGHDIRK 401
>gi|117645344|emb|CAL38138.1| hypothetical protein [synthetic construct]
Length = 414
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 100/219 (45%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S F LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFAEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVG 248
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP DIDFAT ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGG 842
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVG 248
Score = 40.0 bits (92), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 326 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 375
>gi|321461613|gb|EFX72643.1| hypothetical protein DAPPUDRAFT_200873 [Daphnia pulex]
Length = 418
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 112/231 (48%), Gaps = 57/231 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG---------------EGTVTAKVLSY 616
MK++S +F S FT EL +L IFEKH Y++R AG + TA
Sbjct: 1 MKVESEDFKSIFTDELVQLQKIFEKHNYEIRFAGGPVRDLLMNIKPHDLDFATTATPQQM 60
Query: 617 RNRREKED----------------RIGENQPFRKLTLSVQ------------------DK 642
++ E+ RI E + F TL + D
Sbjct: 61 KDMFNSENIRMINLTGEKHGTITVRINEQENFEITTLRIDVVNHGRHAEVEFTQDWELDA 120
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R DGTVYDY G EDL+K AFVGD +R+QEDYLRILRYFRF ARI
Sbjct: 121 NRRDLTVNSMFLGFDGTVYDYCGGWEDLQKRRVAFVGDARTRMQEDYLRILRYFRFCARI 180
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
+PN H+ + +A++ N++GL ISGERIW EL +IL + ++ ML
Sbjct: 181 SPDPNLHEPDTEAALRENMEGLSRISGERIWLELKQILSNRHAGPLLETML 231
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 376 IMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKP 435
+ D+LM KPHD+DFAT ATP QMK MF E +R N GEKHGT+ R+N++ENFE+
Sbjct: 37 VRDLLMNIKPHDLDFATTATPQQMKDMFNSENIRMINLTGEKHGTITVRINEQENFEITT 96
Query: 436 VKGLTWGHAAVGNATWT 452
++ H +T
Sbjct: 97 LRIDVVNHGRHAEVEFT 113
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV GRHAEV+FT+DW+LDANRRDLTVNSMFLG
Sbjct: 94 ITTLRIDVVNHGRHAEVEFTQDWELDANRRDLTVNSMFLGF 134
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F ARI +PN H+ + +A+++N++GL ISGERIW EL +IL + ++ ML +
Sbjct: 175 RFCARISPDPNLHEPDTEAALRENMEGLSRISGERIWLELKQILSNRHAGPLLETMLRLG 234
Query: 857 MFPHLGTDETFATLDFEGLFRSMP------IPFTLL 886
+ P++G E +F+ ++ +P TLL
Sbjct: 235 IAPYIGLGEDPNVKEFKVIWERAKNNNVELLPITLL 270
>gi|341884419|gb|EGT40354.1| hypothetical protein CAEBREN_04765 [Caenorhabditis brenneri]
Length = 538
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 4/135 (2%)
Query: 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAM 76
+ LP Y D++ H IWV ++ GVYD+T+F+ MHPGG+ I+ AAG +++PFWA+
Sbjct: 73 LENLPMYKQEDVKKHGKDAERIWVTYKDGVYDVTDFIPMHPGGDKILLAAGAAVDPFWAL 132
Query: 77 YGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEP 136
Y H EV E+LE YRIG + +D A D S+ +P R P L + KP+NAE
Sbjct: 133 YSQHKTAEVLEILEGYRIGRLDVKDVPKAEPDAFSN----DPERHPALLVRNAKPFNAES 188
Query: 137 PPSMLVENFLTPSLL 151
PPS+L ++F TP+ L
Sbjct: 189 PPSLLTDHFYTPNEL 203
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 84/135 (62%), Gaps = 12/135 (8%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTD------WDTVDFAKSPAIQELPVISAICLPVADA 302
K+I+S+ ES SHWQQ DY+ FSP+ + WDTV P+IQE PV AIC P +
Sbjct: 372 KIIVSEKESDSHWQQKDYRAFSPAVNMGDKLKWDTV-----PSIQEYPVQCAICTPSPNT 426
Query: 303 KLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWR 362
K+ ++ +++ GYAWSGGG+ I+R+++++D G TW + +Q P + WTL+R
Sbjct: 427 KVDRDDGTVDISGYAWSGGGRGIIRIEISVDNGETWSSCEMEQEKNQDP-EHMYAWTLFR 485
Query: 363 ATIPVDPKTKEVSIM 377
A + + P KE +I+
Sbjct: 486 AEVKIPPGVKEFNII 500
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
I +KAVD SYNTQPE+ + IWN+RG++ NA+HRV +
Sbjct: 499 IIAKAVDRSYNTQPETASGIWNVRGLIHNAWHRVPI 534
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA + + K V+GL W A+ NA WTG RL D+L AGI + ++HVH
Sbjct: 254 CAGNRRADMNQYKKVQGLMWEGTAISNAEWTGVRLRDLLADAGI----DVFDEKIKHVHF 309
Query: 482 E 482
E
Sbjct: 310 E 310
>gi|343960647|dbj|BAK61913.1| tRNA-nucleotidyltransferase 1, mitochondrial precursor [Pan
troglodytes]
Length = 434
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 101/220 (45%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQGIDFASTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + NR EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNRGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDLK FVG RI EDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIHEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP IDFA+ ATP QMK MF +R N +GEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQGIDFASTATPTQMKEMFQSAGIRMINNRGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPYIGLPANASLEEFDKVSKNVDGFSPKPMTLL--ASLFKVQDDVTKL 309
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 395
>gi|156397420|ref|XP_001637889.1| predicted protein [Nematostella vectensis]
gi|156225005|gb|EDO45826.1| predicted protein [Nematostella vectensis]
Length = 414
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 116/234 (49%), Gaps = 57/234 (24%)
Query: 569 DGKMKL-DSPEFHSCFTPELKRLAGIFEKHGYQLRIAG---------------------- 605
+GK L D+ F + TPEL RL+ +F KHGY+LRI G
Sbjct: 2 EGKTILADTEGFKAIHTPELLRLSSVFTKHGYELRIVGGAVRDLLMGKLPKDIDLCTNAT 61
Query: 606 ---------------------EGTVTA-------KVLSYRNRREKEDRIGENQPFRKLTL 637
GT+TA +V + R E + R + + L
Sbjct: 62 PEQMIKMFKDEEIRCIETGLQHGTLTAHINKTDFEVTTLRIDVETDGRHAKVKFTNDWQL 121
Query: 638 SVQDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFA 692
+ +D +F L G +YDYFNG DL+KG FVGD RI+EDYLRILRYFRF+
Sbjct: 122 DAERRDLTFNAMSVDLTGNLYDYFNGEIDLRKGHVRFVGDARLRIKEDYLRILRYFRFYG 181
Query: 693 RICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
+I P+NH + L+ IK +GL IS ERIW E++KIL G+ ++ +L+MLY
Sbjct: 182 KIATEPDNHDPDTLAVIKELAEGLRIISVERIWLEVSKILIGNHAQH-LLQMLY 234
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 887 FSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+A+ + +TTLRIDV TDGRHA+V+FT DW+LDA RRDLT N+M
Sbjct: 86 LTAHINKTDFEVTTLRIDVETDGRHAKVKFTNDWQLDAERRDLTFNAM 133
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMGK P DID TNATP+QM MF +E++R E G +HGT+ A +N K +FEV
Sbjct: 41 AVRDLLMGKLPKDIDLCTNATPEQMIKMFKDEEIRCI-ETGLQHGTLTAHIN-KTDFEVT 98
Query: 435 PVK 437
++
Sbjct: 99 TLR 101
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 43/66 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ +I P+NH + L+ IK+ +GL IS ERIW E++KIL G+ ++ ++ + ++
Sbjct: 178 RFYGKIATEPDNHDPDTLAVIKELAEGLRIISVERIWLEVSKILIGNHAQHLLQMLYDLG 237
Query: 857 MFPHLG 862
+ ++G
Sbjct: 238 IASNIG 243
>gi|340375493|ref|XP_003386269.1| PREDICTED: probable sulfite oxidase, mitochondrial-like [Amphimedon
queenslandica]
Length = 575
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 8/155 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+++LS ES S WQ+ DYK F + D + VD+ S A+Q++PV SAICLP+ + + + +
Sbjct: 408 RIVLSTEESPSIWQRRDYKLFPSNVDINNVDYESSEAMQDMPVQSAICLPIPGSTVDISS 467
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
+ ++GYAWSGGG++I RVDV+I+ G+ W VA +SQ P R W W+LW AT+PV
Sbjct: 468 GFVTLRGYAWSGGGRSISRVDVSINGGKDWSVAKLHSNESQKP-NRVWAWSLWEATVPVS 526
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T ++ I+ M D + N P+ +++++
Sbjct: 527 ACTGQLDIVCKAM-------DSSCNTQPENVESIW 554
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 11 LRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSI 70
L AGE LP YS +++ H ++ +WV++ +GVYDIT F+ HPGGE+++ AG +I
Sbjct: 86 LTAGEWKDGLPLYSFDEVKKHDSSENGVWVIYNKGVYDITGFISKHPGGELLLVGAGRAI 145
Query: 71 EPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIAS----DPYVMEP-VRSPLLK 125
+P+W +Y VH E LLES RIGN + K + + EP R P L
Sbjct: 146 DPYWKIYSVHHSPETHALLESMRIGNYDTSSTPEEEKGEDDGELDNQWSNEPQSRHPALL 205
Query: 126 ATSLKPYNAEPPPSMLVENFLTPSLLSQV 154
KP+NAEPPP++L +F TP+ L V
Sbjct: 206 CNQEKPFNAEPPPAILTGDFHTPNDLFYV 234
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 434 KPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVE 482
KPV+GL+W A+GNA WTG RL DVLK G+S + ++HV E
Sbjct: 299 KPVRGLSWKGGAIGNARWTGVRLCDVLKHVGVS---GGNYGGIKHVQFE 344
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVE 519
++I KA+DSS NTQPE+ +IWN RG+ +NA+HRV V+
Sbjct: 531 QLDIVCKAMDSSCNTQPENVESIWNFRGLANNAWHRVSVK 570
>gi|74177543|dbj|BAB27827.3| unnamed protein product [Mus musculus]
Length = 290
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 102/226 (45%), Gaps = 56/226 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDKD 643
E +A + N+ EK I + F TL + +D +
Sbjct: 90 KEMFQSAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+ DLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMM 741
+ P +H E L AI N GL ISGERIW EL KIL G ++
Sbjct: 210 DRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLI 255
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 VTTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEVT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G ++ + ++
Sbjct: 203 RFYGRIVDRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLG 262
Query: 857 MFPHLG 862
+ PH+G
Sbjct: 263 VAPHIG 268
>gi|268581925|ref|XP_002645946.1| Hypothetical protein CBG07713 [Caenorhabditis briggsae]
Length = 541
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 85/135 (62%), Gaps = 4/135 (2%)
Query: 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAM 76
++ LP Y+ +++ H IWV ++ GVYD+T+F+ MHPGG+ I+ AAG +++PFWA+
Sbjct: 76 LANLPMYAQEEVKKHGKDADRIWVTYKDGVYDVTDFISMHPGGDKILLAAGAAVDPFWAL 135
Query: 77 YGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEP 136
Y H EV E+LE YRIG + +D + D + +P R P L + KP+NAE
Sbjct: 136 YSQHKTAEVLEILEGYRIGRLDVKD----VPKVKPDAFSNDPERHPALLVRNAKPFNAES 191
Query: 137 PPSMLVENFLTPSLL 151
PPS+L ++F TP+ L
Sbjct: 192 PPSLLTDHFYTPNEL 206
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 12/135 (8%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTD------WDTVDFAKSPAIQELPVISAICLPVADA 302
K+I+S+ ES SHWQQ DY+ FSP+ + WDTV P+IQE PV AIC P +
Sbjct: 375 KIIVSEKESDSHWQQKDYRAFSPAVNIGDELKWDTV-----PSIQEYPVQCAICTPAPNT 429
Query: 303 KLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWR 362
K+ ++ +++ GYAWSGGG+ I+R+++++D G TW Q+ + + WTL+R
Sbjct: 430 KVDRDDGTVDISGYAWSGGGRGIIRIEISVDGGETWSSCEME-QEEKQDKEHMYAWTLFR 488
Query: 363 ATIPVDPKTKEVSIM 377
+ + P KE +I+
Sbjct: 489 TEVKIPPGVKEFNII 503
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
I +KAVD SYNTQPE+ + IWN+RG++ NA+HRV +
Sbjct: 502 IIAKAVDRSYNTQPETASGIWNVRGLIHNAWHRVPI 537
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA + + K V+GL W A+ NA WTG RL D+L AGI + ++HVH
Sbjct: 257 CAGNRRADMNQYKKVQGLMWEGTAISNAEWTGVRLRDILADAGI----DVFDEKIKHVHF 312
Query: 482 E 482
E
Sbjct: 313 E 313
>gi|157423165|gb|AAI53772.1| LOC398421 protein [Xenopus laevis]
Length = 419
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 101/220 (45%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
M+L S EF++ FT LK LA +F K Y+LRIAG
Sbjct: 15 MRLQSDEFNALFTDGLKTLANLFAKDRYELRIAGGAVRDLLSGKQPHDVDFATTATPEQM 74
Query: 606 ------------------EGTVTAKV-------LSYRNRREKEDRIGENQPFRKLTLSVQ 640
GTVTA++ + R + R E + + +
Sbjct: 75 KDMFLKDGVRLINNKGETHGTVTARINDQNFEITTLRVDLHTDGRHAEVEFTTDWEIDAE 134
Query: 641 DKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
+D + DGT+YDYFNG+EDLK FVGDP RIQEDYLRILRY RF+ RI
Sbjct: 135 RRDLTINSMFLGFDGTLYDYFNGYEDLKNRCVRFVGDPSQRIQEDYLRILRYLRFYGRIS 194
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
H L A++ N GL ISGERIW EL KIL G+
Sbjct: 195 ERSGAHTSGTLDAVRENASGLRGISGERIWVELKKILEGN 234
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+PHD+DFAT ATP+QMK MF ++ VR N KGE HGTV AR+ND +NFE+
Sbjct: 50 AVRDLLSGKQPHDVDFATTATPEQMKDMFLKDGVRLINNKGETHGTVTARIND-QNFEIT 108
Query: 435 PVK 437
++
Sbjct: 109 TLR 111
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR+D+ TDGRHAEV+FT DW++DA RRDLT+NSMFLG
Sbjct: 107 ITTLRVDLHTDGRHAEVEFTTDWEIDAERRDLTINSMFLGF 147
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI H L A+++N GL ISGERIW EL KIL G+ ++ + ++
Sbjct: 188 RFYGRISERSGAHTSGTLDAVRENASGLRGISGERIWVELKKILEGNHVNHLIQIIYDLG 247
Query: 857 MFPHLGTDETFATLDF----EGLFRSMPIPFTLL 886
+ PH+G E +F E R P P TLL
Sbjct: 248 VAPHVGLPEDGNLEEFARVCERSRRMSPKPMTLL 281
>gi|195107325|ref|XP_001998264.1| GI23728 [Drosophila mojavensis]
gi|193914858|gb|EDW13725.1| GI23728 [Drosophila mojavensis]
Length = 450
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 128/264 (48%), Gaps = 60/264 (22%)
Query: 538 PSGYQPRATLQGARLLTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELK--------- 588
P+G + T + ++++ P +R P K K+DS EFHS FTPEL+
Sbjct: 4 PAGIANKTTKISSEIISQLGKPPKMR--ENPAIK-KVDSDEFHSIFTPELEALVAMFKKY 60
Query: 589 ----RLAG----------------------------IFEKHGYQLRIA-GE--GTVTAKV 613
R+AG +F K +L A GE GT+T ++
Sbjct: 61 DYELRIAGGAVRDILMNIKPKDIDFATTATPEQMKEMFGKEEVRLINAKGEKHGTITPRI 120
Query: 614 LSYRNRREKEDRIGENQPFRKL--------TLSVQDKDRSFR-----LDGTVYDYFNGHE 660
+ N RI R L +D + DGTVYDYF G+E
Sbjct: 121 HNKENFEVTTLRIDVRTDGRHADVVFTTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYE 180
Query: 661 DLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNIS 720
DL++ FVGD RI+EDYLRILRYFRF+ RI P+ H + L+AIK N GL IS
Sbjct: 181 DLQQRRVVFVGDADVRIKEDYLRILRYFRFYGRIAERPDCHDKATLAAIKANAVGLARIS 240
Query: 721 GERIWTELNKILGGSFSKEMMLKM 744
GERIW EL KI+ G+F++E++L+M
Sbjct: 241 GERIWAELQKIVVGNFNRELILEM 264
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM KP DIDFAT ATP+QMK MF +E+VR N KGEKHGT+ R+++KENFEV
Sbjct: 70 AVRDILMNIKPKDIDFATTATPEQMKEMFGKEEVRLINAKGEKHGTITPRIHNKENFEVT 129
Query: 435 PVK 437
++
Sbjct: 130 TLR 132
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV TDGRHA+V FT DW+LDANRRDLT+NSMFLG
Sbjct: 128 VTTLRIDVRTDGRHADVVFTTDWQLDANRRDLTINSMFLGF 168
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P+ H + L+AIK N GL ISGERIW EL KI+ G+F++E++L+M
Sbjct: 209 RFYGRIAERPDCHDKATLAAIKANAVGLARISGERIWAELQKIVVGNFNRELILEMNNCG 268
Query: 857 MFPHLG 862
+ G
Sbjct: 269 LLQQCG 274
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQF 798
YQ L L + R+Y+ +L+KY K EL +W++P+ P+NGN ++ +
Sbjct: 351 YQKLCL----QPYAKRDYVEQLLKYANKLELYAQLKEWQMPSLPINGNTLKPY 399
>gi|148666982|gb|EDK99398.1| tRNA nucleotidyl transferase, CCA-adding, 1, isoform CRA_c [Mus
musculus]
Length = 296
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 100/219 (45%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 36 MKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQM 95
Query: 606 -EGTVTAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDKD 643
E +A + N+ EK I + F TL + +D +
Sbjct: 96 KEMFQSAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGRHAEVEFTTDWQKDAE 155
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+ DLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 156 RRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 215
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 216 DRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTG 254
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 128 VTTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 168
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 71 AVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEVT 129
Query: 435 PVK 437
++
Sbjct: 130 TLR 132
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G ++ + ++
Sbjct: 209 RFYGRIVDRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLG 268
Query: 857 MFPHLG 862
+ PH+G
Sbjct: 269 VAPHIG 274
>gi|402859550|ref|XP_003894217.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform
1 [Papio anubis]
Length = 439
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 102/220 (46%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKNLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + N+ EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYF+G+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFDGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDAETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDAETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ P++G + +F+ + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPYIGLPANASLEEFDKVSKNVEGFSPKPMTLL--ASLFKVQDDVTKL 309
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 395
>gi|402859552|ref|XP_003894218.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform
2 [Papio anubis]
Length = 419
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 101/219 (46%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKNLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + N+ EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYF+G+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFDGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 210 DKPGDHDAETLEAIAENAKGLAGISGERIWVELKKILVG 248
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGG 842
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G
Sbjct: 203 RFYGRIVDKPGDHDAETLEAIAENAKGLAGISGERIWVELKKILVG 248
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 326 YQDFIIDSREPDATTR--VCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRK 375
>gi|308488231|ref|XP_003106310.1| hypothetical protein CRE_15364 [Caenorhabditis remanei]
gi|308254300|gb|EFO98252.1| hypothetical protein CRE_15364 [Caenorhabditis remanei]
Length = 541
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 4/135 (2%)
Query: 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAM 76
+ LP Y +++ H IWV ++ GVYD+T+F+ MHPGG+ I+ AAG +++PFWA+
Sbjct: 76 LENLPMYKQEEVKKHGKDADRIWVTYKDGVYDVTDFISMHPGGDKILLAAGAAVDPFWAL 135
Query: 77 YGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEP 136
Y H EV E+LE YRIG + +D A D S+ +P R P L + KP+NAE
Sbjct: 136 YSQHKTAEVLEILEGYRIGRLDVKDVPKAEPDAFSN----DPERHPALLVRNAKPFNAES 191
Query: 137 PPSMLVENFLTPSLL 151
PPS+L ++F TP+ L
Sbjct: 192 PPSLLTDHFYTPNEL 206
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 84/135 (62%), Gaps = 12/135 (8%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTD------WDTVDFAKSPAIQELPVISAICLPVADA 302
++I+S+ ES SHWQQ DY+ FSP+ + WDTV P+IQE PV AIC P +
Sbjct: 375 RIIVSEKESDSHWQQKDYRAFSPAVNMGDELKWDTV-----PSIQEYPVQCAICTPAPNT 429
Query: 303 KLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWR 362
K+ ++ +++ GYAWSGGG+ I+R+++++D G TW Q+ + + + WTL++
Sbjct: 430 KVDRDDGTVDISGYAWSGGGRGIIRIEISVDGGETWSSCEME-QEEKQDVEHMYAWTLFK 488
Query: 363 ATIPVDPKTKEVSIM 377
A + + P KE +I+
Sbjct: 489 AEVKIPPGVKEFNII 503
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
I +KAVD SYNTQPE+ + IWN+RG++ NA+HRV +
Sbjct: 502 IIAKAVDRSYNTQPETASGIWNVRGLIHNAWHRVPI 537
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA + + K V+GL W A+ NA WTG RL D+L AGI + ++HVH
Sbjct: 257 CAGNRRADMNQYKKVQGLMWEGTAISNAEWTGVRLRDILADAGI----DVFDEKIKHVHF 312
Query: 482 E 482
E
Sbjct: 313 E 313
>gi|281346452|gb|EFB22036.1| hypothetical protein PANDA_004022 [Ailuropoda melanoleuca]
Length = 434
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 103/221 (46%), Gaps = 58/221 (26%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
MKL SPEF S FT LK L +F K ++LRIAG G V
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAG-GAVRDLLNGIKPQDVDFATTATPAQ 88
Query: 610 ------TAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDK 642
+A + N+ EK I EN L + V +D
Sbjct: 89 MKDMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVVTDGRHAEVEFTTDWQKDA 148
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R DGT++DYF+G+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 149 ERRDLTINSMFLGFDGTLFDYFSGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRI 208
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 209 VDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVVTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGIKPQDVDFATTATPAQMKDMFQSAGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITT--LRIDVTTDGR 910
+ P+LG + +F + +++ P P TLL A+ F+ +T LR+ ++ + +
Sbjct: 263 VAPYLGLPTNASLEEFNKVSKNVDGFSPKPMTLL--ASLFKVQDDVTKLDLRLKISKEEK 320
Query: 911 HAEVQFTEDWKLDANRRDLT 930
+ + + NR+DL
Sbjct: 321 NLGIFIVK------NRKDLV 334
>gi|301760376|ref|XP_002915988.1| PREDICTED: tRNA-nucleotidyltransferase 1, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 436
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 103/221 (46%), Gaps = 58/221 (26%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
MKL SPEF S FT LK L +F K ++LRIAG G V
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAG-GAVRDLLNGIKPQDVDFATTATPAQ 88
Query: 610 ------TAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDK 642
+A + N+ EK I EN L + V +D
Sbjct: 89 MKDMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVVTDGRHAEVEFTTDWQKDA 148
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R DGT++DYF+G+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 149 ERRDLTINSMFLGFDGTLFDYFSGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRI 208
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 209 VDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGN 249
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVVTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGIKPQDVDFATTATPAQMKDMFQSAGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITT--LRIDVTTDGR 910
+ P+LG + +F + +++ P P TLL A+ F+ +T LR+ ++ + +
Sbjct: 263 VAPYLGLPTNASLEEFNKVSKNVDGFSPKPMTLL--ASLFKVQDDVTKLDLRLKISKEEK 320
Query: 911 HAEVQFTEDWKLDANRRDLT 930
+ + + NR+DL
Sbjct: 321 NLGIFIVK------NRKDLV 334
>gi|340380069|ref|XP_003388546.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like,
partial [Amphimedon queenslandica]
Length = 398
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 120/230 (52%), Gaps = 54/230 (23%)
Query: 569 DGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTAKVLSYRNRR-------- 620
+GK LD+P+F S TP+L R+ +F GY LR+ G G V +L RN +
Sbjct: 6 EGKTLLDTPQFKSLLTPDLLRIEELFRSEGYSLRLVG-GAVRDLLLG-RNAKDIDLATDC 63
Query: 621 ---------EKE------DRIGENQP--FRKLTLS------------------VQDKDR- 644
E+E +RI ++ + TL V+D +R
Sbjct: 64 TPDGMIKLFEREGISSIDERIHTDRSNDYEITTLRIDHVTDGRHALVQFTSDWVKDAERR 123
Query: 645 -------SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN 697
S DG +YDYF+G + L + FVGD VSRIQEDYLRILRYFRF+ RIC
Sbjct: 124 DLTINSMSLGFDGKLYDYFDGQKHLAERKLLFVGDAVSRIQEDYLRILRYFRFYGRICLL 183
Query: 698 PNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
PN H + L+AI++N GL IS ERIW+E+++IL G+ S ++ ++Y+
Sbjct: 184 PNAHDPDTLTAIRDNAVGLTKISVERIWSEMSRILVGNHSPHLV-SLMYE 232
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 32/41 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID TDGRHA VQFT DW DA RRDLT+NSM LG
Sbjct: 94 ITTLRIDHVTDGRHALVQFTSDWVKDAERRDLTINSMSLGF 134
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RIC PN H + L+AI+ N GL IS ERIW+E+++IL G+ S ++ M E+
Sbjct: 175 RFYGRICLLPNAHDPDTLTAIRDNAVGLTKISVERIWSEMSRILVGNHSPHLVSLMYELG 234
Query: 857 MFPHLGTDETFATLDFEGLFRSMPIPFTLLFSANFFRNLARITTLRIDVTTDGRHAEVQF 916
+ ++G + + ++ SM + L L + + G E +F
Sbjct: 235 VAANIGLPDDGNLNELTKVWESMHGRYQL-----------EPVCLLVSLLKSGEEVE-RF 282
Query: 917 TEDWKLDANRRDL 929
+ WKL R L
Sbjct: 283 SRQWKLSNLERKL 295
>gi|328774328|gb|EGF84365.1| hypothetical protein BATDEDRAFT_8334 [Batrachochytrium
dendrobatidis JAM81]
Length = 540
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 97/160 (60%), Gaps = 10/160 (6%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVA-DAKLKL 306
GK+ LSD ES SHWQQ+DYKGFSPS+ +T D++KS +IQELP+ SAI P A D
Sbjct: 367 GKITLSDEESQSHWQQHDYKGFSPSSTLETSDYSKSNSIQELPIQSAILYPRAGDEICAN 426
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
++ ++ V+GYA SGGG+ I RVDV+ D G+TW A D + P R W WT W A +P
Sbjct: 427 DDDEVIVKGYALSGGGRHIYRVDVSADDGKTWRDAELVQMDKK-PYGRQWAWTQWEAKLP 485
Query: 367 ---VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
V + +E + + ID + N+ P+ ++++
Sbjct: 486 AEWVSERAQEGKVTFVCKA-----IDSSYNSQPETFESIY 520
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
S P YS ++ H L++ IWV + GVYDI++FV +HPGGE I+ AAG +I+PFWA++
Sbjct: 57 SGRPIYSRGEVAQHNSLETGIWVTYVDGVYDISKFVTIHPGGERILLAAGHAIDPFWAVF 116
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDP------YVMEPVRSPLLKATSLKP 131
VH E ELLE+YRIG++ A+DI S ++ EP R P L+ S +P
Sbjct: 117 SVHATPETRELLENYRIGDLMPRAEDSTAQDIESHSKGIELLFINEPERHPSLQVRSARP 176
Query: 132 YNAEPPPSMLVENFLTPSLL 151
NAE P L F+TP+ L
Sbjct: 177 CNAEAHPDSLA-TFVTPNEL 195
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 396 PDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGAR 455
PD E K + F E CA KE +V+PVKGL W A+ N WTG R
Sbjct: 222 PDDYSLSIDELKTK-FTHVSETVTLQCAGNRRKEMHDVRPVKGLQWQGGAISNTVWTGVR 280
Query: 456 LVDVLKAAGIS-PDQSLD--SADVQHVHVE 482
L DVL AG PD +L + D+ HV +
Sbjct: 281 LRDVLADAGYQLPDFTLPNYAEDITHVQFD 310
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 473 SADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEIWSK 523
S Q V KA+DSSYN+QPE+F +I+N RGVL A+ RV+ SK
Sbjct: 490 SERAQEGKVTFVCKAIDSSYNSQPETFESIYNARGVLVGAWSRVQANFKSK 540
>gi|410951594|ref|XP_003982479.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial [Felis
catus]
Length = 436
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 101/220 (45%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTAGLKSLTDLFVKENHELRIAGGAVRDLLSGVKPQDVDFATTATPAQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + N+ EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVVTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYF+G EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFSGFEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILIGN 249
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVVTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLSGVKPQDVDFATTATPAQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILIGNHVNHLINLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITT--LRIDVTTDGR 910
+ P++G + +F + +++ P P T+L A+ F+ +T LR+ ++ + +
Sbjct: 263 VAPYIGLPTNASLEEFNKVSKNVEGFSPKPMTVL--ASLFKVQDDVTKLDLRLKISKEEK 320
Query: 911 HAEVQFTEDWKLDANRRDLT 930
+ + + NR+DL
Sbjct: 321 NLGIFVVK------NRKDLV 334
>gi|16416453|dbj|BAB70663.1| tRNA-nucleotidyltransferase [Mus musculus]
Length = 434
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 99/219 (45%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDKD 643
E +A + N+ EK I + F TL + +D +
Sbjct: 90 KEMFQSAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+ DLK FVG RIQEDYLRILRY RF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYIRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 210 DRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTG 248
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 VTTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEVT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G ++ + ++
Sbjct: 203 RFYGRIVDRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLG 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ PH+G +F + +++ P P TLL A+ F+ +T L
Sbjct: 263 VAPHIGLPANANLEEFNKVSKNVEGFSPKPMTLL--ASLFKVQDDVTKL 309
Score = 39.7 bits (91), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFVIDSREPDATAR--VCELLKYQGEHGLLKEMQQWSVPPFPVSGHDIRK 395
>gi|308472054|ref|XP_003098256.1| hypothetical protein CRE_08428 [Caenorhabditis remanei]
gi|308269242|gb|EFP13195.1| hypothetical protein CRE_08428 [Caenorhabditis remanei]
Length = 918
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 4/135 (2%)
Query: 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAM 76
+ LP Y+ +++ H IWV ++ GVYD+T+F+ MHPGGE I+ AAG +++PFWA+
Sbjct: 453 LKNLPIYTQEEVKKHGKEADRIWVTYKDGVYDVTDFISMHPGGEKILLAAGAAVDPFWAL 512
Query: 77 YGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEP 136
Y H EV ++LE YRIG + +D A D S+ +P R P L + KP+N E
Sbjct: 513 YSQHKTAEVLKILEGYRIGRLDVKDVPKAEPDAFSN----DPERHPALLVRNAKPFNGES 568
Query: 137 PPSMLVENFLTPSLL 151
PPS+L ++F TP+ L
Sbjct: 569 PPSLLTDHFYTPNEL 583
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 84/135 (62%), Gaps = 12/135 (8%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTD------WDTVDFAKSPAIQELPVISAICLPVADA 302
++I+S+ ES SHWQQ DY+ FSP+ + WDTV P+IQE PV AIC P +
Sbjct: 752 RIIVSEKESDSHWQQKDYRAFSPAVNMGDELKWDTV-----PSIQEYPVQCAICTPAPNT 806
Query: 303 KLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWR 362
K+ ++ +++ GYAWSGGG+ I+R+++++D G TW Q+ + L + WTL++
Sbjct: 807 KVNSDDGTVDISGYAWSGGGRGIIRIEISVDGGETWSSCEME-QEKKQDLDHMYAWTLFK 865
Query: 363 ATIPVDPKTKEVSIM 377
A + + P KE +I+
Sbjct: 866 AEVKIPPIVKEFNII 880
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
I +KAVD SYNTQPE+ + IWN+RG++ NA+HRV +
Sbjct: 879 IIAKAVDRSYNTQPETASGIWNVRGLIHNAWHRVPI 914
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 343 FTGQDSQAPLTRHW----GWTLWRATIPV-DPKTKEVSI-MDMLMGKKPHDIDFATNATP 396
F G+ + LT H+ R +PV D KT++ + ++ L GK ID +
Sbjct: 564 FNGESPPSLLTDHFYTPNELFFVRNHLPVPDIKTEDHCLTVETLNGKT---IDLSV---- 616
Query: 397 DQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARL 456
D++K F K T + G A MN + K V+GL W A+ NA WTG RL
Sbjct: 617 DELKKKF---KSYTIGSVIQCAGNRRADMN-----QYKKVQGLMWEGTAISNAEWTGVRL 668
Query: 457 VDVLKAAGISPDQSLDSADVQHVHVE 482
D+L AGI + ++HVH E
Sbjct: 669 RDILADAGI----DVFDEKIKHVHFE 690
>gi|47227381|emb|CAF96930.1| unnamed protein product [Tetraodon nigroviridis]
Length = 407
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 112/232 (48%), Gaps = 59/232 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
M+L + EF S FT L LA +F KH ++LRIAG G V
Sbjct: 4 MQLKTSEFQSLFTDGLNGLAELFVKHHHELRIAG-GAVRDLLSGRRPEDVDFATTATPEE 62
Query: 610 ------TAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDK 642
+A V + EK I N+ F TL V +D
Sbjct: 63 MKRMFQSAGVRMINTKGEKHGTITARLHNENFEVTTLRVDVQTDGRHAEVEFTTDWQKDA 122
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R LDGT+YDYF G+EDL+ FVG V RIQEDYLRILRYFRF+ R+
Sbjct: 123 ERRDLTINSMFLGLDGTLYDYFQGYEDLQNRKVRFVGSAVERIQEDYLRILRYFRFYGRV 182
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
P++H E L AI+ N GL +ISGERIW EL K++ G + +L+++Y
Sbjct: 183 ALEPDDHDPETLKAIRENGCGLASISGERIWVELKKMVVGDHAAH-LLELIY 233
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G++P D+DFAT ATP++MK MF VR N KGEKHGT+ AR+++ ENFEV
Sbjct: 39 AVRDLLSGRRPEDVDFATTATPEEMKRMFQSAGVRMINTKGEKHGTITARLHN-ENFEVT 97
Query: 435 PVK 437
++
Sbjct: 98 TLR 100
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG+
Sbjct: 96 VTTLRVDVQTDGRHAEVEFTTDWQKDAERRDLTINSMFLGL 136
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ P++H E L AI++N GL +ISGERIW EL K++ G + ++ + +
Sbjct: 177 RFYGRVALEPDDHDPETLKAIRENGCGLASISGERIWVELKKMVVGDHAAHLLELIYSLE 236
Query: 857 MFPHLG 862
+ ++G
Sbjct: 237 LAQYMG 242
>gi|328707317|ref|XP_003243360.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Acyrthosiphon pisum]
Length = 458
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 72/98 (73%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
+DGT+YDYF G+EDLKK FVGDP RI EDYLRILRYFRF+ R+ PN H E +L
Sbjct: 174 MDGTIYDYFGGYEDLKKRQIKFVGDPKLRITEDYLRILRYFRFYGRLATAPNLHDEYILE 233
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
AI+ GL NISGERIW+EL KIL G+++ +++ +L
Sbjct: 234 AIREKGSGLKNISGERIWSELYKILEGNYASDIIKTLL 271
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV TDGRHA+V++T+DW LDA RRDLTVNSMFLGM
Sbjct: 134 LTTLRIDVVTDGRHADVEYTKDWLLDAGRRDLTVNSMFLGM 174
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ PN H E +L AI++ GL NISGERIW+EL KIL G+++ +++ +L +
Sbjct: 215 RFYGRLATAPNLHDEYILEAIREKGSGLKNISGERIWSELYKILEGNYASDIIKTLLNLG 274
Query: 857 MFPHLG 862
+ P++G
Sbjct: 275 LGPYIG 280
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L+ K P D+DFAT ATPD+M M E +R N+ G KHGTV + D NFE+
Sbjct: 77 AVRDILLRKTPTDLDFATTATPDEMVEMMENENIRIVNKGGLKHGTVTTHV-DGVNFELT 135
Query: 435 PVK 437
++
Sbjct: 136 TLR 138
>gi|149412778|ref|XP_001506360.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial
[Ornithorhynchus anatinus]
Length = 433
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGT+YDYFNG+EDLK FVG P RIQEDYLRILRYFRFF +I NP++H + L
Sbjct: 162 FDGTLYDYFNGYEDLKNKKVRFVGLPNKRIQEDYLRILRYFRFFGKIAENPDDHDPDTLK 221
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
AIK N GL ISGERIW EL KIL G+ E +++++Y+
Sbjct: 222 AIKGNAKGLAGISGERIWVELKKILVGNHV-EHLVRLMYE 260
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G PHD+DFAT ATPDQMK MF VR N KGE HGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLSGTPPHDVDFATTATPDQMKMMFKAAGVRLINHKGENHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVMTDGRHAEVEFTTDWEKDAGRRDLTINSMFLGF 162
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+FF +I NP++H + L AIK N GL ISGERIW EL KIL G+ + ++ M E++
Sbjct: 203 RFFGKIAENPDDHDPDTLKAIKGNAKGLAGISGERIWVELKKILVGNHVEHLVRLMYELD 262
Query: 857 MFPHLG--TDETFATLD--FEGLFRSMPIPFTLLFSANFFRNLARITTL 901
+ ++G TD LD ++ P T L S FR+ +T L
Sbjct: 263 VAYYIGLPTDVNLEELDKVYKNTRNLSASPITFLTS--LFRDQDDVTKL 309
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
+Q+ +L S+ TT R Y EL+KY+ + L+K+ W +P FP+ G+ IR+
Sbjct: 346 FQDFILDSRDPGTTDRIY--ELLKYQGEGALLKEMQNWSIPLFPVTGHDIRK 395
>gi|195389791|ref|XP_002053557.1| GJ23286 [Drosophila virilis]
gi|194151643|gb|EDW67077.1| GJ23286 [Drosophila virilis]
Length = 454
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 122/255 (47%), Gaps = 63/255 (24%)
Query: 553 LTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELK-------------RLAG------- 592
L +PP R + P K K+DS EFHS FTPELK R+AG
Sbjct: 22 LGKPP-----RMRENPAFK-KVDSEEFHSIFTPELKALVALFKKYNYELRIAGGAVRDIL 75
Query: 593 ---------------------IFEKHGYQLRIA-GE--GTVTAKVLSYRNRREKEDRIGE 628
+F K ++ A GE GT+T ++ + N RI
Sbjct: 76 MNIKPKDIDFATTATPDQMKEMFTKEEVRMINAKGEKHGTITPRIHNKENFEVTTLRIDV 135
Query: 629 NQPFRKL--------TLSVQDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVS 675
R L +D + DGTVYDYF G++D+++ FVGD
Sbjct: 136 RTDGRHADVVFTTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYDDVQQRRVVFVGDADV 195
Query: 676 RIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
RI+EDYLRILRYFRF+ RI + +H + L+AIK N GL ISGERIW EL KI+ G+
Sbjct: 196 RIKEDYLRILRYFRFYGRISADAQSHDKPTLAAIKANAAGLSRISGERIWAELQKIVVGN 255
Query: 736 FSKEMMLKMLYQNLL 750
F E+ML+M +LL
Sbjct: 256 FGLELMLEMHNCDLL 270
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 49/63 (77%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM KP DIDFAT ATPDQMK MF +E+VR N KGEKHGT+ R+++KENFEV
Sbjct: 70 AVRDILMNIKPKDIDFATTATPDQMKEMFTKEEVRMINAKGEKHGTITPRIHNKENFEVT 129
Query: 435 PVK 437
++
Sbjct: 130 TLR 132
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV TDGRHA+V FT DW+LDANRRDLT+NSMFLG
Sbjct: 128 VTTLRIDVRTDGRHADVVFTTDWQLDANRRDLTINSMFLGF 168
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + +H + L+AIK N GL ISGERIW EL KI+ G+F E+ML+M +
Sbjct: 209 RFYGRISADAQSHDKPTLAAIKANAAGLSRISGERIWAELQKIVVGNFGLELMLEMHNCD 268
Query: 857 MFPHLG 862
+ G
Sbjct: 269 LLEQCG 274
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQF 798
YQ L L + R+Y+ +L+KY K EL W+ P P+NGN ++ +
Sbjct: 351 YQKLCL----QPYAKRDYVEQLLKYANKLELYNQLKAWQTPNLPINGNTLKGY 399
>gi|95007071|emb|CAJ20287.1| sulfite oxidase, putative [Toxoplasma gondii RH]
Length = 434
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 95/150 (63%), Gaps = 5/150 (3%)
Query: 5 VKALSKLRAGEPISTLPWYSLSDIQNHKDLKSS--IWVVFRQGVYDITEFVQMHPGG-EI 61
+ AL +LR GE LP+Y++SD++ H + +WV +R GVYD+T+F++ HPGG +
Sbjct: 24 LTALLELRPGELREDLPFYTVSDVKEHGAVGEGKRLWVAYRHGVYDVTDFLEKHPGGRDR 83
Query: 62 IMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRS 121
++ A G ++PFW +YG H V ELLES RIGNI++ + A+ D Y EPVR
Sbjct: 84 LLLAVGRDLDPFWRVYGQHNLASVHELLESMRIGNIAKLEE--ASDSPLGDAYGNEPVRH 141
Query: 122 PLLKATSLKPYNAEPPPSMLVENFLTPSLL 151
P L S KP+NAE P ++L ++F TP+ L
Sbjct: 142 PALVVRSEKPFNAETPLALLTDDFFTPNDL 171
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 362 RATIPVDPKTKEVSIMDMLMG-----KKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGE 416
R +PV P+ ++I+ +++ K+ ++++ P+ K FA + K
Sbjct: 175 RNHLPV-PQGSVLTILALILSVEYVDKEKYEVEIEIE-LPNGEKKRFASFTLSDLQTKFY 232
Query: 417 KHGTVCARM---NDKENFEVKP---VKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS 470
H C N +E+F K VKGL W A+GNA WTG L DVL+ G +++
Sbjct: 233 PHHLPCTLQCAGNRREDFNRKSGKRVKGLEWCGGAIGNALWTGCLLADVLRHCGFGEEEA 292
Query: 471 LDSADVQHVHVE 482
++H+H E
Sbjct: 293 -RRLGIRHIHFE 303
>gi|384249992|gb|EIE23472.1| molybdopterin binding oxidoreductase, partial [Coccomyxa
subellipsoidea C-169]
Length = 472
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 96/163 (58%), Gaps = 14/163 (8%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++I S ES SHWQQ DYK FSPS DWD VD++ +PA+QE V SAIC P L+
Sbjct: 298 RIIASKEESQSHWQQKDYKSFSPSVDWDNVDWSSAPAVQETNVQSAICEPRPGGVLEGPP 357
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN----FTGQDSQAPLTR----HWGWTL 360
++EV+GYA+SGGG AI+RVDV+ D G TW A + + A L+ +W WTL
Sbjct: 358 DEIEVRGYAYSGGGHAIIRVDVSADDGETWTTAELEPVYDRRYRLASLSSTFHWNWAWTL 417
Query: 361 WRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
WR ++P+ P++K+ I + +D N P+ A++
Sbjct: 418 WRTSVPL-PESKDGHIKLICRA-----VDSDYNTQPESPAAIW 454
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 81/133 (60%), Gaps = 5/133 (3%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
++ ++ H +WV ++ GVYD+T+F+ MHPGG + +M AAGG+++PFWAMY H
Sbjct: 1 FTGEEVAEHCTRDKRVWVTYKDGVYDVTDFLDMHPGGAQRLMLAAGGALDPFWAMYAQHN 60
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
DEV +LLE YRIG + AA +DPY EP R P L S +P+NAE P +L
Sbjct: 61 TDEVRQLLEDYRIGKL----VGAAATQQVADPYANEPKRHPALVVRSQQPFNAETPVDVL 116
Query: 142 VENFLTPSLLSQV 154
+ LTP+ L V
Sbjct: 117 GTSRLTPNELFYV 129
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
H+++ +AVDS YNTQPES A IWNLRGVL+NA+H V + +
Sbjct: 431 HIKLICRAVDSDYNTQPESPAAIWNLRGVLNNAWHEVVLSV 471
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 9/83 (10%)
Query: 405 EEKVRTFNEKGEKHGTVCARM----NDKENF-EVKPVKGLTWGHAAVGNATWTGARLVDV 459
E ++ K +KH TV A + N ++ F +VK VKGL WG A+G A ++GARL DV
Sbjct: 156 ELSLKDLTTKFKKH-TVTATLQCTGNRRDQFNDVKKVKGLEWGIGAIGTAEFSGARLSDV 214
Query: 460 LKAAGISPDQSLDSADVQHVHVE 482
L AG+ D ++D +++H+ E
Sbjct: 215 LAYAGLD-DDTID--EIEHIQFE 234
>gi|317418942|emb|CBN80980.1| tRNA-nucleotidyltransferase 1, mitochondrial [Dicentrarchus labrax]
Length = 427
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 114/232 (49%), Gaps = 59/232 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
M+L + EF S F L LA +FEKH ++LRIAG G V
Sbjct: 24 MRLKTSEFQSLFNDGLNGLAEVFEKHQHELRIAG-GAVRDLLSGKRPEDVDFATTATPEE 82
Query: 610 ------TAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDK 642
+A + N+ EK I N+ F TL V +D
Sbjct: 83 MKRMFQSAGIRMINNKGEKHGTITARLHNENFEVTTLRVDVQTDGRHAEVEFTTDWQKDA 142
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R LDGT+YDYF G++DL+ FVG RIQEDYLRILRYFRF+ R+
Sbjct: 143 ERRDLTINSMFLGLDGTLYDYFKGYDDLQNRKVRFVGSAEQRIQEDYLRILRYFRFYGRV 202
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
P++H+ E L+AI+ N GL ISGERIW E+ K++ G+ + +L+++Y
Sbjct: 203 ALEPDDHEPETLAAIRENGRGLAAISGERIWVEIKKMVVGNHAAH-LLELMY 253
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+P D+DFAT ATP++MK MF +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 59 AVRDLLSGKRPEDVDFATTATPEEMKRMFQSAGIRMINNKGEKHGTITARLHN-ENFEVT 117
Query: 435 PVK 437
++
Sbjct: 118 TLR 120
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG+
Sbjct: 116 VTTLRVDVQTDGRHAEVEFTTDWQKDAERRDLTINSMFLGL 156
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ P++H+ E L+AI++N GL ISGERIW E+ K++ G+ + ++ M +
Sbjct: 197 RFYGRVALEPDDHEPETLAAIRENGRGLAAISGERIWVEIKKMVVGNHAAHLLELMYSLE 256
Query: 857 MFPHLG 862
+ ++G
Sbjct: 257 LAQYIG 262
>gi|334335551|ref|XP_001374161.2| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Monodelphis domestica]
Length = 434
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 103/226 (45%), Gaps = 56/226 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MK++SPEF S FT LK LA +F K Y+LRIAG
Sbjct: 30 MKVESPEFQSLFTEGLKNLAELFSKEKYELRIAGGAVRDLLNGTKPQDVDFATTATPAQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSVQDKDR-------------SF 646
E A + N+ EK I EN L + V R +
Sbjct: 90 KEMFQAAGIRLINNKGEKHGTITARLHEENFEITTLRIDVITDGRHAEVEFTTDWQKDAE 149
Query: 647 RLDGTVYDYF-----------NGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R D T+ F NG+EDLK FVGDP RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDFFNGYEDLKNKKVRFVGDPKERIQEDYLRILRYFRFYGRIA 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMM 741
+ P H + L AIK N GL ISGERIW EL KIL G+ + ++
Sbjct: 210 DRPGTHDSKTLEAIKENAKGLAGISGERIWVELKKILVGNHANHLV 255
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGTKPQDVDFATTATPAQMKEMFQAAGIRLINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVITDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P H + L AIK+N GL ISGERIW EL KIL G+ + ++ M +++
Sbjct: 203 RFYGRIADRPGTHDSKTLEAIKENAKGLAGISGERIWVELKKILVGNHANHLVHLMYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTLRIDVTTDGRH 911
+ +LG + +F + +++ P P TLL S ++ + LR+ + + ++
Sbjct: 263 VAHYLGLPAAGSLEEFNTVSKNVETLSPKPMTLLASLFKVQDDVKNLDLRLKIAKEEKN 321
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ +L S+ T R I EL+KY+ + +L+K+ +W +P FP++G+ +R+
Sbjct: 346 YQDFVLDSREPDTLGR--ICELLKYQGEVDLLKEMQQWSIPPFPVSGHDVRK 395
>gi|157110831|ref|XP_001651265.1| poly(a) polymerase [Aedes aegypti]
gi|108883866|gb|EAT48091.1| AAEL000848-PA [Aedes aegypti]
Length = 267
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 69/98 (70%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DG VYDYF G+EDL+K AFVGDP RI+EDYLRILRYFRF+ RI N +NH EE L
Sbjct: 93 FDGKVYDYFYGYEDLQKRRVAFVGDPDLRIKEDYLRILRYFRFYGRIAENDDNHDEETLR 152
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
I N GL ISGERIW E KIL G+F ++ ++M+
Sbjct: 153 IIAKNAAGLAKISGERIWQEWKKILTGNFGCDLTIRMI 190
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI N +NH EE L I KN GL ISGERIW E KIL G+F ++ ++M+
Sbjct: 134 RFYGRIAENDDNHDEETLRIIAKNAAGLAKISGERIWQEWKKILTGNFGCDLTIRMINCG 193
Query: 857 MFPHLGTDETFATLDFEGLFRSM 879
+ PH+G + T +F+ +F+ +
Sbjct: 194 LAPHMGLPDQPNTDEFKAVFKRV 216
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 381 MGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVK--G 438
MGK P DID AT ATP +MK +F +E +R N GEKHGT+ R+NDKENFE+ ++
Sbjct: 1 MGKCPKDIDIATTATPTEMKEIFNKENIRMVNMNGEKHGTITPRINDKENFEITTLRIDA 60
Query: 439 LTWG-HAAVGNAT 450
+T G HA V + T
Sbjct: 61 VTDGRHAEVIHTT 73
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 34/41 (82%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID TDGRHAEV T DW LDANRRDLT+NSMFLG
Sbjct: 53 ITTLRIDAVTDGRHAEVIHTTDWLLDANRRDLTINSMFLGF 93
>gi|431913507|gb|ELK15182.1| tRNA-nucleotidyltransferase 1, mitochondrial [Pteropus alecto]
Length = 434
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 102/221 (46%), Gaps = 58/221 (26%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
MKL S EF S FT LK L +F + ++LRIAG G V
Sbjct: 30 MKLQSAEFQSLFTEGLKGLTELFVRENHELRIAG-GAVRDLLSGVKPQDVDFATTATPSQ 88
Query: 610 ------TAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDK 642
+A V N+ EK I EN L + V +D
Sbjct: 89 MKGMFQSAGVRMINNKGEKHGTITARLHEENFEITTLRIDVLTDGRHAEVEFTTDWQKDA 148
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 149 ERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRI 208
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ P +H E L AI N GL ISGERIW EL K+L G+
Sbjct: 209 VDKPGDHDAETLEAIAENAKGLAGISGERIWVELKKMLVGN 249
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF VR N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLSGVKPQDVDFATTATPSQMKGMFQSAGVRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVLTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL K+L G+ ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDAETLEAIAENAKGLAGISGERIWVELKKMLVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTLRI 903
+ P++G + +F+ + R++ P P TLL A+ FR +T L +
Sbjct: 263 VAPYIGLPANASLEEFDKVSRNVEGFSPKPMTLL--ASLFRVQDDVTKLDV 311
>gi|268554488|ref|XP_002635231.1| Hypothetical protein CBG11474 [Caenorhabditis briggsae]
Length = 462
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 115/234 (49%), Gaps = 60/234 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTAKVLSYR-------------- 617
MK+D+ +F + FTP+L +L +F K Y+LRIAG G V +++ R
Sbjct: 38 MKIDNEDFRALFTPQLLKLRDLFAKRNYELRIAG-GAVRDLLMNIRPADVDFASTATPTQ 96
Query: 618 -------------NRREKED-----RIGENQPFRKLTLSVQ------------------D 641
++R +E RI E + F TL + D
Sbjct: 97 MKEMFEQENIRMLHKRGEEHGTITCRIDEKENFEITTLRIDVVCDGRRAKVEYTTDWQLD 156
Query: 642 KDRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFAR 693
+R L G V DYF G D++ AFVGD RIQEDYLRILRYFRFF R
Sbjct: 157 ANRRDLTINSLFLDLHGNVVDYFGGIGDIETRRVAFVGDARQRIQEDYLRILRYFRFFGR 216
Query: 694 ICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
I N+P +H+ + + AI +N DG+ IS ERIWTEL KI+ G + +++ M+ Q
Sbjct: 217 ISNSP-DHEADTIQAIIDNKDGMSGISAERIWTELKKIVIGRMADDVVKAMIEQ 269
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM +P D+DFA+ ATP QMK MF +E +R +++GE+HGT+ R+++KENFE+
Sbjct: 73 AVRDLLMNIRPADVDFASTATPTQMKEMFEQENIRMLHKRGEEHGTITCRIDEKENFEIT 132
Query: 435 PVK 437
++
Sbjct: 133 TLR 135
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV DGR A+V++T DW+LDANRRDLT+NS+FL +
Sbjct: 131 ITTLRIDVVCDGRRAKVEYTTDWQLDANRRDLTINSLFLDL 171
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLE-I 855
+FF RI N+P+ H+ + + AI N DG+ IS ERIWTEL KI+ G + +++ M+E
Sbjct: 212 RFFGRISNSPD-HEADTIQAIIDNKDGMSGISAERIWTELKKIVIGRMADDVVKAMIEQC 270
Query: 856 NMFPHLGTDETFATLDFEGLFRSMPI---PFTLLFS 888
+ +LG E F +F+ P P T++ S
Sbjct: 271 ELQKYLGLPEECNITRFRQIFKRFPKSVEPMTMVAS 306
>gi|149728339|ref|XP_001496927.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform
1 [Equus caballus]
Length = 434
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 101/220 (45%), Gaps = 56/220 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPAQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSV----------------QDKD 643
E +A + N+ EK I EN L + V +D +
Sbjct: 90 KEMFQSAGIRMINNKGEKHGTITARLHEENFEITTLRIDVVTDGRHAEVEFTTDWQKDAE 149
Query: 644 RS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R DGT++DYFNG+EDL+ FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYEDLQNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
+ +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 210 DKLGDHDPETLEAIAENAKGLAAISGERIWVELKKILVGN 249
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVVTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPAQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 203 RFYGRIVDKLGDHDPETLEAIAENAKGLAAISGERIWVELKKILVGNHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITT--LRIDVTTDGR 910
+ P++G + +F+ + +++ P P TLL A+ F+ +T LR+ ++ + +
Sbjct: 263 VAPYIGLPANASLEEFDKVSKNVEGLSPKPMTLL--ASLFKVQDDVTKLDLRLKISKEEK 320
Query: 911 HAEVQFTEDWKLDANRRDL 929
+ + + NR+DL
Sbjct: 321 NLGLFIVK------NRKDL 333
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSRESDATTR--VCELLKYQGEQCLLKEMQQWSIPPFPVSGHDIRK 395
>gi|340713538|ref|XP_003395299.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Bombus terrestris]
Length = 381
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 72/98 (73%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
+G +YDYF G++DL+K FVG+P RI+EDYLRILRYFRF+ R+ P+ H E +
Sbjct: 93 FEGRIYDYFFGYDDLQKRRVVFVGNPTCRIKEDYLRILRYFRFYGRVAEQPDIHDESTII 152
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
AIK N+ GL ISGERIW E +KIL G+++KE+ LK+L
Sbjct: 153 AIKENVHGLEGISGERIWNEWSKILSGNYAKELTLKLL 190
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 46/57 (80%)
Query: 381 MGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVK 437
M KP D+DFAT+ATP++MK+MF +E +R N KGEKHGT+ +R+NDKENFEV ++
Sbjct: 1 MNIKPVDLDFATDATPEEMKSMFEKENIRMINNKGEKHGTITSRINDKENFEVTTLR 57
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 37/39 (94%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLRID+ TDGRHA+VQFT+DWK+DA RRDLT+NSMFL
Sbjct: 53 VTTLRIDIRTDGRHAKVQFTKDWKVDALRRDLTINSMFL 91
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ P+ H E + AIK+N+ GL ISGERIW E +KIL G+++KE+ LK+LE
Sbjct: 134 RFYGRVAEQPDIHDESTIIAIKENVHGLEGISGERIWNEWSKILSGNYAKELTLKLLECG 193
Query: 857 MFPHLGTDETFATLDFE 873
+ ++G E +FE
Sbjct: 194 ITRYVGLPENPNIKNFE 210
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 745 LYQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFAR 801
Y+ +L+ K R YI EL+ K+ L KD K +P FP++GN+++Q+ +
Sbjct: 273 FYKGILIHWKGNVVNARSYICELLNSKQYFSLAKDVEKLVIPRFPVSGNMLKQYVRK 329
>gi|327266138|ref|XP_003217863.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Anolis carolinensis]
Length = 499
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 111/233 (47%), Gaps = 64/233 (27%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
MKL+S EF S FTP LK +AG+ +RIAG G V
Sbjct: 100 MKLESAEFQSLFTPGLKSVAGM-----KTVRIAG-GAVRDLLSGMKPQDVDFATSATPTQ 153
Query: 610 ------TAKVLSYRNRREKEDRIG---ENQPFRKLTLSVQ----------------DKDR 644
V NR E+ I ++ F TL + +KD
Sbjct: 154 MKEMFQATGVRMINNRGERHGTITARLHDENFEITTLRIDLVTDGRHAEVEFTTDWEKDA 213
Query: 645 SFR----------LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
R LDGT+YD+FNG++DLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 214 ERRDLTINSMFLGLDGTLYDFFNGYDDLKNKKVRFVGQANQRIQEDYLRILRYFRFYGRI 273
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
P +H+ + L AIK N GL ISGERIW EL KIL G+ + +++++Y+
Sbjct: 274 AEKPGDHEPKTLEAIKANAKGLAGISGERIWMELKKILVGNHANH-LIRLMYE 325
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT+ATP QMK MF VR N +GE+HGT+ AR++D ENFE+
Sbjct: 130 AVRDLLSGMKPQDVDFATSATPTQMKEMFQATGVRMINNRGERHGTITARLHD-ENFEIT 188
Query: 435 PVK 437
++
Sbjct: 189 TLR 191
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID+ TDGRHAEV+FT DW+ DA RRDLT+NSMFLG+
Sbjct: 187 ITTLRIDLVTDGRHAEVEFTTDWEKDAERRDLTINSMFLGL 227
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P +H+ + L AIK N GL ISGERIW EL KIL G+ + ++ M E++
Sbjct: 268 RFYGRIAEKPGDHEPKTLEAIKANAKGLAGISGERIWMELKKILVGNHANHLIRLMYELD 327
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFS 888
+ ++G +F+ + +++ P P T+L S
Sbjct: 328 VANYIGLPVNGNLQEFDTVCKNVQNLFPKPMTVLTS 363
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R I EL+KY+ + L+ + +W +PTFP++G+ IR+
Sbjct: 411 YQDFIIDSREVDATSR--ICELLKYQGEEGLLHEMQQWSVPTFPVSGHDIRR 460
>gi|71992535|ref|NP_001024735.1| Protein SUOX-1, isoform a [Caenorhabditis elegans]
gi|3878058|emb|CAB17069.1| Protein SUOX-1, isoform a [Caenorhabditis elegans]
Length = 541
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 10/138 (7%)
Query: 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAM 76
+ L Y +++ H IWV ++ GVYD+T+F+ MHPGG+ I+ AAG +++PFWA+
Sbjct: 76 LENLQIYKQEEVKKHGKDADRIWVTYKDGVYDVTDFIAMHPGGDKILLAAGAAVDPFWAL 135
Query: 77 YGVHLQDEVFELLESYRIGNISQEDSKLAAKDI---ASDPYVMEPVRSPLLKATSLKPYN 133
Y H EV E+LE YRIG KL KD+ +D + +P R P L + KP+N
Sbjct: 136 YSQHKTKEVLEILEGYRIG-------KLDVKDVPKPVADAFSNDPERHPALLVRNSKPFN 188
Query: 134 AEPPPSMLVENFLTPSLL 151
AE PPS+L ++F TP+ L
Sbjct: 189 AETPPSLLTDHFYTPNEL 206
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 19/161 (11%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTD------WDTVDFAKSPAIQELPVISAICLPVADA 302
K+I+S+ ES SHWQQ DY+ FSP+ + W+TV P+IQE PV AIC P +
Sbjct: 375 KIIVSEKESDSHWQQKDYRAFSPAVNIGDELKWNTV-----PSIQEYPVQCAICSPAPNT 429
Query: 303 KLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWR 362
K+ + +++ GYAWSGGG+ I+R++V++D G TW+ Q+ + + WTL++
Sbjct: 430 KVDRGDETVDISGYAWSGGGRGIIRIEVSVDGGETWNSVEME-QEEKQDQEHMYAWTLFK 488
Query: 363 ATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
A + + P KE +I+ +D A N P+ ++
Sbjct: 489 AEVKIPPGVKEFNIIAKA-------VDRAYNTQPETASGIW 522
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 30/36 (83%)
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
I +KAVD +YNTQPE+ + IWN+RG++ NA+HRV +
Sbjct: 502 IIAKAVDRAYNTQPETASGIWNVRGLIHNAWHRVPI 537
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA + + K V+GL W A+ NA WTG RL D+L AGI + ++HVH
Sbjct: 257 CAGNRRADMNQYKKVQGLMWEGTAISNAEWTGVRLRDLLADAGI----DVFDDKIKHVHF 312
Query: 482 E 482
E
Sbjct: 313 E 313
>gi|209154746|gb|ACI33605.1| tRNA-nucleotidyltransferase 1, mitochondrial precursor
Mitochondrial [Salmo salar]
Length = 430
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 109/233 (46%), Gaps = 59/233 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
M+L + EF S F+ L +A IFEKH ++LRIAG G V
Sbjct: 26 MQLKTTEFKSLFSDGLNGIAEIFEKHKFELRIAG-GAVRDLLSGKRPEDVDFATTATPEE 84
Query: 610 ------TAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDK 642
A + N+ EK I N+ F TL V +D
Sbjct: 85 MKSMFQKAGIRMINNKGEKHGTITARLHNENFEVTTLRVDVETDGRHAEVEFTTDWQKDA 144
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R LDGT+YDYF G+EDLK FVG RIQEDYLRILRYFRF+ R+
Sbjct: 145 ERRDLTINSMFLGLDGTLYDYFQGYEDLKNRKVRFVGSAEQRIQEDYLRILRYFRFYGRV 204
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
H L AI+ N GL ISGERIW EL K++ G+ + +LK++Y+
Sbjct: 205 SVKAAEHDPATLEAIRENARGLAAISGERIWVELKKMVVGNHAAH-LLKVMYE 256
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+P D+DFAT ATP++MK+MF + +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 61 AVRDLLSGKRPEDVDFATTATPEEMKSMFQKAGIRMINNKGEKHGTITARLHN-ENFEVT 119
Query: 435 PVK 437
++
Sbjct: 120 TLR 122
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+DV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG+
Sbjct: 118 VTTLRVDVETDGRHAEVEFTTDWQKDAERRDLTINSMFLGL 158
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ H L AI++N GL ISGERIW EL K++ G+ + ++ M E+
Sbjct: 199 RFYGRVSVKAAEHDPATLEAIRENARGLAAISGERIWVELKKMVVGNHAAHLLKVMYELG 258
Query: 857 MFPHLG 862
+ ++G
Sbjct: 259 LAQYIG 264
>gi|66730382|ref|NP_001019432.1| tRNA-nucleotidyltransferase 1, mitochondrial [Rattus norvegicus]
gi|66267368|gb|AAH95841.1| TRNA nucleotidyl transferase, CCA-adding, 1 [Rattus norvegicus]
gi|111493965|gb|AAI05613.1| TRNA nucleotidyl transferase, CCA-adding, 1 [Rattus norvegicus]
Length = 434
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 96/219 (43%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTEM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSVQDKDRSFRLDGT-------- 651
E A + N+ EK I EN L + V R ++ T
Sbjct: 90 KEMFQAAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVSTDGRHAEVEFTTDWQKDAE 149
Query: 652 ----------------VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
++DYFNG+ DLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 210 DKPGDHDRETLEAIAENAKGLAGISGERIWVELKKILTG 248
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV+TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 VTTLRIDVSTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP +MK MF +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPTEMKEMFQAAGIRMINNKGEKHGTITARLHE-ENFEVT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDRETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ H+G +F + +++ P P T+L A+ F+ +T L
Sbjct: 263 VASHIGLPANANLEEFNKVSKNVEGFSPKPMTVL--ASLFKVQDDVTKL 309
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFVIDSREPDATAR--VCELLKYQGEHALLKEMQQWSVPPFPVSGHDIRK 395
>gi|357621447|gb|EHJ73276.1| hypothetical protein KGM_06992 [Danaus plexippus]
Length = 546
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Query: 12 RAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIE 71
+AG LP Y ++ H + + S WV ++QGVYD+T F+ HPGGE I AAG S+E
Sbjct: 77 QAGAKRPDLPTYRAEEVSQHNN-ERSFWVTYKQGVYDVTSFLPSHPGGEQIYNAAGLSVE 135
Query: 72 PFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKP 131
PFW +YG+H E++ELLESYRIGN+ ED + D + + EP R L + +P
Sbjct: 136 PFWNVYGMHKTKEIYELLESYRIGNL-HEDDLVDHSD--EEMWAKEPFRDKRLCVKTARP 192
Query: 132 YNAEPPPSMLVENFLTPSLL 151
+NAE PP+ V +F TP+ L
Sbjct: 193 FNAETPPAEQVRHFDTPAEL 212
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENH 309
+ +S ES SHW Q DY+ F PS W+T DF +P + LPV SA+C P ++
Sbjct: 385 IKVSSEESPSHWHQRDYRSFGPSVSWETADFPSAPPVYSLPVTSAVCSPEDGDTVRPRRG 444
Query: 310 QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVDP 369
+ VQGYA+SGGG I+RV+V+ D+G TW A + AP H+ WTLW +P
Sbjct: 445 ALHVQGYAYSGGGAKIIRVEVSTDRGATWREARL--RSDSAPPREHYSWTLWDVDLPAAG 502
Query: 370 KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
E+ + K D +F NA P+ + ++
Sbjct: 503 PQMEIWV-------KATDSNF--NAQPENFRDIW 527
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 35/41 (85%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+EIW KA DS++N QPE+F +IWN+RG+LSNAYH+++V +
Sbjct: 504 QMEIWVKATDSNFNAQPENFRDIWNIRGILSNAYHKIKVNV 544
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 398 QMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLV 457
+ + + +++ F + + +CA E VKPVKGL+W A+GNA W G L
Sbjct: 240 ERRLQLSVDELNRFKRQEVRAALMCAGNRRSEMNLVKPVKGLSWRTGAIGNAVWGGVLLR 299
Query: 458 DVLKAAGISPDQSLDSADVQHVHVEIWSKAVDSS 491
DVL AAG+S D + HV + +D++
Sbjct: 300 DVLLAAGVS------DKDTEGKHVTLMGADMDAT 327
>gi|392337872|ref|XP_003753382.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Rattus norvegicus]
gi|392344609|ref|XP_003749028.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Rattus norvegicus]
Length = 434
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 96/219 (43%), Gaps = 56/219 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTEM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRI-----GENQPFRKLTLSVQDKDRSFRLDGT-------- 651
E A + N+ EK I EN L + V R ++ T
Sbjct: 90 KEMFQAAGIRMINNKGEKHGTIIARLHEENFEVTTLRIDVSTDGRHAEVEFTTDWQKDAE 149
Query: 652 ----------------VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
++DYFNG+ DLK FVG RIQEDYLRILRYFRF+ RI
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIV 209
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ P +H E L AI N GL ISGERIW EL KIL G
Sbjct: 210 DKPGDHDRETLEAIAENAKGLAGISGERIWVELKKILTG 248
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV+TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 VTTLRIDVSTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP +MK MF +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPTEMKEMFQAAGIRMINNKGEKHGTIIARLHE-ENFEVT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G ++ + +++
Sbjct: 203 RFYGRIVDKPGDHDRETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ H+G +F + +++ P P T+L A+ F+ +T L
Sbjct: 263 VASHIGLPANANLEEFNKVSKNVEGFSPKPMTVL--ASLFKVQDDVTKL 309
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K+ +W +P FP++G+ IR+
Sbjct: 346 YQDFVIDSREPDATAR--VCELLKYQGEHALLKEMQQWSVPPFPVSGHDIRK 395
>gi|195345561|ref|XP_002039337.1| GM22781 [Drosophila sechellia]
gi|194134563|gb|EDW56079.1| GM22781 [Drosophila sechellia]
Length = 371
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 90/153 (58%), Gaps = 1/153 (0%)
Query: 2 EDGVKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI 61
E+ ++A ++L LP Y +++ H + IWV + GVYD+T+F + HPGG+
Sbjct: 87 EEELEATARLWHVTNRKELPTYRADEVEQHNCAEKRIWVTYGLGVYDVTDFAENHPGGDK 146
Query: 62 IMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRS 121
I+ AAG +I+PFWA+Y H EV ELLE +RIGN+ ++ S P+ EP R
Sbjct: 147 ILMAAGSAIDPFWAIYQQHNTLEVLELLEGFRIGNLEGLVVTNVDDELGS-PWSQEPQRH 205
Query: 122 PLLKATSLKPYNAEPPPSMLVENFLTPSLLSQV 154
LLK S +P+NAEPP +L E F TP+ L V
Sbjct: 206 ALLKPASKRPFNAEPPIGLLAEQFYTPNELFYV 238
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 406 EKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
E ++ + +C E +V VK L+W AV A W+GARL DVL+ G+
Sbjct: 268 EGIKALPKHSVTAAIMCGGNRRSEMTQVMAVKELSWRAGAVYYAKWSGARLCDVLRERGV 327
Query: 466 SPDQS----LDSADVQ 477
PD + ++SAD++
Sbjct: 328 QPDDTEHGIVESADLE 343
>gi|116203935|ref|XP_001227778.1| hypothetical protein CHGG_09851 [Chaetomium globosum CBS 148.51]
gi|88175979|gb|EAQ83447.1| hypothetical protein CHGG_09851 [Chaetomium globosum CBS 148.51]
Length = 558
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 82/139 (58%), Gaps = 3/139 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYG 78
+LP + L+DI+ H S WV F VYDIT+++ HPGG++I++AAG SIEP+W ++
Sbjct: 111 SLPRFRLADIRKHDASSSQPWVTFEDKVYDITDWIAAHPGGDVILRAAGASIEPYWNIFT 170
Query: 79 VHLQDEVFELLESYRIGNISQED---SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
+H V E+L+ Y+IG I D L A + DP+V +P+R P L + KP NAE
Sbjct: 171 IHKAPHVREILQQYQIGFIDMADLGPDGLPAAETVEDPFVNDPIRDPRLITHTAKPRNAE 230
Query: 136 PPPSMLVENFLTPSLLSQV 154
PP L F TP L V
Sbjct: 231 PPNEELDRTFKTPKKLFYV 249
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL-TRHWGWTLWR 362
+ + VQGYA+SGGG+AI RVDV++D G+TW A +++P + W WT WR
Sbjct: 373 DEPVAVQGYAYSGGGRAITRVDVSLDGGKTWDQAELVNDRAESPPGNKAWAWTRWR 428
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 197 LAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML---YSSLLRIPFCSHTGKVILS 253
L A + DP+V +P+R P L + KP NAEPP L + + ++ + H V +
Sbjct: 199 LPAAETVEDPFVNDPIRDPRLITHTAKPRNAEPPNEELDRTFKTPKKLFYVRHHMWVPVV 258
Query: 254 DHESTS----HWQQNDYKGFSP----STDWDTVDFAKSPAIQELPVISAI 295
+ WQ+ DYK F P + DWD ++ +IQE+PV SAI
Sbjct: 259 EAPYAGDRLLKWQRRDYKSFGPNEGANPDWD-----RAVSIQEMPVTSAI 303
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D +YNTQPES I+N+RG L+ A+HRV++
Sbjct: 470 KATDDAYNTQPESHRGIYNVRGNLATAWHRVKI 502
>gi|302838819|ref|XP_002950967.1| hypothetical protein VOLCADRAFT_81306 [Volvox carteri f.
nagariensis]
gi|300263662|gb|EFJ47861.1| hypothetical protein VOLCADRAFT_81306 [Volvox carteri f.
nagariensis]
Length = 622
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 9/159 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+++ S ES SHWQQ DYK F+PS DWD+V++ +PA+QE PV SAIC P + L +
Sbjct: 450 RIVPSSSESPSHWQQRDYKAFNPSVDWDSVEWGSAPALQEPPVTSAICEPAPGTSVSLAD 509
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN----FTGQDSQAPLTRHWGWTLWRAT 364
++ ++GYAWSGGG+ I+RVDV+ D G++W A G + W WTLW +
Sbjct: 510 GEITLRGYAWSGGGRGIIRVDVSADGGKSWTAAKLLPPAPGAPPHGSYSGAWAWTLWEVS 569
Query: 365 IPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T ++ L+ K +D + N PD + ++
Sbjct: 570 SAAAEGTSSPTL--ELVCKA---VDSSYNNQPDSIGPIW 603
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 82/132 (62%), Gaps = 3/132 (2%)
Query: 21 PWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGV 79
P Y+ ++ HK + IWV +++GVYDITEFV+MHPGG IM AAGGS+EPFWA+Y
Sbjct: 145 PIYTREEVAKHKTPRDRIWVTYKEGVYDITEFVEMHPGGLSKIMLAAGGSVEPFWALYQQ 204
Query: 80 HLQDEVFELLESYRIGNI--SQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
H + EV +LE YRIG + + AA A DPY +P R P S +PYN E P
Sbjct: 205 HRKPEVLGILEPYRIGTLEGGAAAAASAAAAAAVDPYASDPARHPSFIPRSERPYNGETP 264
Query: 138 PSMLVENFLTPS 149
++L + +TP+
Sbjct: 265 GTLLAASPITPN 276
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+E+ KAVDSSYN QP+S IWNLRG+++NA+HRV V++
Sbjct: 581 LELVCKAVDSSYNNQPDSIGPIWNLRGIVNNAWHRVNVKL 620
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
C+ E V+ VKGL+W A+G A W G RL DVLK +S D V+H+
Sbjct: 329 CSGNRRNEMSLVRHVKGLSWDQGAIGTAVWGGVRLRDVLKVGRLSEDD----MHVRHIQF 384
Query: 482 EIWSK 486
E + K
Sbjct: 385 EGYDK 389
>gi|147900819|ref|NP_001089848.1| tRNA nucleotidyl transferase, CCA-adding, 1 [Xenopus laevis]
gi|80477591|gb|AAI08538.1| MGC130991 protein [Xenopus laevis]
Length = 419
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGT+YDYFNG+EDLKK FVGDP RIQEDYLRILRY RF+ RI + H L
Sbjct: 147 FDGTLYDYFNGYEDLKKRCVRFVGDPSQRIQEDYLRILRYLRFYGRISERTSAHTSGTLD 206
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
AI+ N GL ISGERIW EL KIL G+ +++++Y+
Sbjct: 207 AIRENASGLRGISGERIWVELKKILEGNHVNH-LIQIIYE 245
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+PHD+DFAT ATPDQMK MF +E VR N KGEKHGTV AR+N+ +NFE+
Sbjct: 50 AVRDLLSGKQPHDVDFATTATPDQMKDMFIKEGVRMINNKGEKHGTVTARINE-QNFEIT 108
Query: 435 PVK 437
++
Sbjct: 109 TLR 111
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR+D+ TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 107 ITTLRVDLHTDGRHAEVEFTTDWETDAERRDLTINSMFLGF 147
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + H L AI++N GL ISGERIW EL KIL G+ ++ + E+
Sbjct: 188 RFYGRISERTSAHTSGTLDAIRENASGLRGISGERIWVELKKILEGNHVNHLIQIIYELG 247
Query: 857 MFPHLGTDETFATLDF----EGLFRSMPIPFTLL 886
+ PH+G E +F E R P P TLL
Sbjct: 248 VAPHVGLPEDGNLEEFARVCEHSHRMSPKPMTLL 281
>gi|348672279|gb|EGZ12099.1| hypothetical protein PHYSODRAFT_250369 [Phytophthora sojae]
Length = 520
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 83/133 (62%), Gaps = 5/133 (3%)
Query: 24 SLSDIQNHKDL-KSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQ 82
S+ ++Q H ++ WVV++ GVY+IT+F+ HPGG I+ AAG SIEPFW +Y H
Sbjct: 5 SVHEVQRHTGANRNGTWVVYKNGVYNITKFIAAHPGGTKILLAAGNSIEPFWQLYAAHNH 64
Query: 83 DEVFELLESYRIGNISQEDSK----LAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPP 138
+V ++LE RIGN+ ED + L + PY +P R P LK S P+NAEPP
Sbjct: 65 ADVHKILEKLRIGNLRAEDVEMLEALRKERYGDGPYSKDPTRHPALKVNSSMPFNAEPPS 124
Query: 139 SMLVENFLTPSLL 151
+L+++F+TP+ L
Sbjct: 125 ELLMQSFITPNDL 137
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 13/161 (8%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAK--SPAIQELPVISAICLPVADAKLKL 306
+++LS ES S WQQ DYKGF P+ D+ DF K +IQELPV SAI P D+ +
Sbjct: 332 RIVLSSEESPSFWQQRDYKGFPPNVDYTRDDFWKFAGDSIQELPVQSAITEPKNDSVHFV 391
Query: 307 ENHQ----MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWR 362
++ + V+GYAWSGGG+ I+RVD+++D G+TW A + R W WT W
Sbjct: 392 DDATDSSIVAVKGYAWSGGGRNIIRVDISVDGGKTWTPAELHESGKRQKYNRAWAWTPWE 451
Query: 363 ATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ V P TK++ I+ +D + N PD + ++
Sbjct: 452 LDVEVPPGTKKLDILCKA-------VDASYNVQPDTIAPIW 485
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
++I KAVD+SYN QP++ A IWN+RGVL+NA+HRV V +
Sbjct: 463 LDILCKAVDASYNVQPDTIAPIWNMRGVLNNAWHRVHVSV 502
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 171 SSFKHSDEKLKLVKVMAGNISQEDSK----LAAKDIASDPYVMEPVRSPLLKATSLKPYN 226
++ H+D L K+ GN+ ED + L + PY +P R P LK S P+N
Sbjct: 60 AAHNHADVHKILEKLRIGNLRAEDVEMLEALRKERYGDGPYSKDPTRHPALKVNSSMPFN 119
Query: 227 AEPPPSMLYSSLL 239
AEPP +L S +
Sbjct: 120 AEPPSELLMQSFI 132
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 395 TPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGA 454
T D++K+ F V T + CA E VK V GL+W A+ A WTG
Sbjct: 172 TLDELKSKFKHHTVTTTIQ--------CAGNRRAEMSGVKQVNGLSWDTTALSTANWTGV 223
Query: 455 RLVDVLKAAGISPDQS 470
L DVL + G++ + S
Sbjct: 224 LLSDVLASIGVTDEDS 239
>gi|443717634|gb|ELU08601.1| hypothetical protein CAPTEDRAFT_151154 [Capitella teleta]
Length = 384
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 71/98 (72%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGT+YD+FNG+EDL+K FVGD RIQED+LRILRYFRF+ R+ +P H+ E L+
Sbjct: 113 FDGTIYDFFNGNEDLQKQRICFVGDANKRIQEDFLRILRYFRFYGRVVQHPGQHERETLN 172
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
AI+ N+ GL +ISGERIW E+ KIL G + ++ M+
Sbjct: 173 AIQRNVHGLADISGERIWVEVKKILVGRHAAHLVRLMM 210
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L+ K PHD+DFAT ATP +MK MF E +R N GEKHGT+ R++D ENFEV
Sbjct: 15 AVRDLLLAKVPHDVDFATTATPQEMKTMFESEGIRMINMNGEKHGTITCRIHDAENFEVT 74
Query: 435 PVK 437
++
Sbjct: 75 TLR 77
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ +P H+ E L+AI++N+ GL +ISGERIW E+ KIL G + ++ M+E+
Sbjct: 154 RFYGRVVQHPGQHERETLNAIQRNVHGLADISGERIWVEVKKILVGRHAAHLVRLMMELG 213
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLL 886
++PH+G ++F+ + + P P TLL
Sbjct: 214 LYPHIGFPANSDLMEFDRVCENCSNLNPQPLTLL 247
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLR DV TDGRHAEV+FT DW +DA RRDLT+NSMFLG
Sbjct: 73 VTTLRRDVVTDGRHAEVEFTSDWAVDAERRDLTINSMFLG 112
>gi|341886479|gb|EGT42414.1| hypothetical protein CAEBREN_02546 [Caenorhabditis brenneri]
Length = 434
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 114/237 (48%), Gaps = 60/237 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTAKVLSYR-------------- 617
+K+D+ +F + FTPEL +L +F K Y++RIAG G V +++ R
Sbjct: 9 IKIDNEDFRALFTPELLKLRDLFAKRNYEIRIAG-GAVRDLLMNIRPADVDFASTATPTQ 67
Query: 618 -------------NRREKED-----RIGENQPFRKLTLSVQ------------------D 641
++R +E RI + + F TL V D
Sbjct: 68 MKEMFEEEKIRMLHKRGEEHGTITCRIDDKENFEITTLRVDIVCDGRRAQVEYTTNWQLD 127
Query: 642 KDRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFAR 693
+R L G V DYF+G D++ AFVG RIQEDYLRILRYFRFF R
Sbjct: 128 ANRRDLTINSLFLDLHGNVVDYFDGIRDIETRRIAFVGSARQRIQEDYLRILRYFRFFGR 187
Query: 694 ICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
I N+P H+ + + AI N DG+ IS ERIWTEL KI+ G + E++ M+ Q L
Sbjct: 188 IANSP-EHEADTIQAIIENKDGMAGISAERIWTELKKIVVGRMADEVVKAMIEQCQL 243
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM +P D+DFA+ ATP QMK MF EEK+R +++GE+HGT+ R++DKENFE+
Sbjct: 44 AVRDLLMNIRPADVDFASTATPTQMKEMFEEEKIRMLHKRGEEHGTITCRIDDKENFEIT 103
Query: 435 PVK 437
++
Sbjct: 104 TLR 106
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR+D+ DGR A+V++T +W+LDANRRDLT+NS+FL +
Sbjct: 102 ITTLRVDIVCDGRRAQVEYTTNWQLDANRRDLTINSLFLDL 142
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLE-I 855
+FF RI N+P H+ + + AI +N DG+ IS ERIWTEL KI+ G + E++ M+E
Sbjct: 183 RFFGRIANSPE-HEADTIQAIIENKDGMAGISAERIWTELKKIVVGRMADEVVKAMIEQC 241
Query: 856 NMFPHLGTDETFATLDFEGLFRSMP 880
+ +LG E F ++ P
Sbjct: 242 QLQKYLGLPEECNLDRFHKVYTRYP 266
>gi|148235405|ref|NP_001082356.1| ATP(CTP):tRNA nucleotidyltransferase precursor [Xenopus laevis]
gi|24753797|gb|AAN64029.1|AF466151_1 ATP(CTP):tRNA nucleotidyltransferase precursor [Xenopus laevis]
Length = 428
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 113/259 (43%), Gaps = 43/259 (16%)
Query: 496 PESFANIWNLRGVLSNAYHRVRVEIWSKAVDSSYNTQPENGHPSGYQPRATLQGARLLTR 555
P + +W L LS R++ + ++ T Y+ R R L
Sbjct: 9 PHMLSRVWTLSRRLSTM--RLQSDEFNALFTDGLKTLANLFAKDRYELRIAGGAVRDLLS 66
Query: 556 PPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTAKVLS 615
PH V +F + TPE ++ +F K G +L I +G V +
Sbjct: 67 GKQPHDV---------------DFATTATPE--QMKDMFLKDGVRL-INNKGETHGTVTA 108
Query: 616 YRNRREKE-------------------DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYF 656
N E E DR+ + R LT++ DGT+YDYF
Sbjct: 109 RDNVSEFEITTLRVDCTQMGDMLSGIHDRLEIDAERRDLTINSM----FLGFDGTLYDYF 164
Query: 657 NGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGL 716
NG+EDLK FVGDP RIQEDYLRILRYFRF+ RI H L A++ N GL
Sbjct: 165 NGYEDLKNRCVRFVGDPSQRIQEDYLRILRYFRFYGRISERSGAHTSGTLDAVRENASGL 224
Query: 717 HNISGERIWTELNKILGGS 735
ISGERIW EL KIL G+
Sbjct: 225 RGISGERIWVELKKILEGN 243
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+PHD+DFAT ATP+QMK MF ++ VR N KGE HGTV AR N E FE+
Sbjct: 60 AVRDLLSGKQPHDVDFATTATPEQMKDMFLKDGVRLINNKGETHGTVTARDNVSE-FEIT 118
Query: 435 PVK 437
++
Sbjct: 119 TLR 121
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI H L A+++N GL ISGERIW EL KIL G+ ++ + ++
Sbjct: 197 RFYGRISERSGAHTSGTLDAVRENASGLRGISGERIWVELKKILEGNHVNHLIQIIYDLG 256
Query: 857 MFPHLGTDETFATLDF----EGLFRSMPIPFTLL 886
+ PH+G E +F E R P P TLL
Sbjct: 257 VAPHVGLPEDGNLEEFARVCERSRRMSPKPMTLL 290
>gi|363738795|ref|XP_003642068.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial,
partial [Gallus gallus]
Length = 387
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
LDG +YD+FNG+EDLK FVG +RIQEDYLRILRYFRF+ RI P +H+ L
Sbjct: 116 LDGMLYDFFNGYEDLKNKKIRFVGKASARIQEDYLRILRYFRFYGRIAEKPGDHEPSTLQ 175
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
AIK+N GL ISGERIW EL KIL G+ ++++LY+
Sbjct: 176 AIKDNAKGLAGISGERIWVELKKILIGNHVNH-LVRLLYE 214
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID+ TDGRHAEV+FT DW+ DA RRDLTVNSMFLG+
Sbjct: 76 ITTLRIDIVTDGRHAEVEFTTDWEKDAERRDLTVNSMFLGL 116
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G P D+DFAT ATP+QMK MF VR N KGEKHGT+ AR+++ +NFE+
Sbjct: 19 AVRDLLSGMTPQDVDFATTATPEQMKDMFTSAGVRLINNKGEKHGTITARLHE-QNFEIT 77
Query: 435 PVK 437
++
Sbjct: 78 TLR 80
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P +H+ L AIK N GL ISGERIW EL KIL G+ ++ + E++
Sbjct: 157 RFYGRIAEKPGDHEPSTLQAIKDNAKGLAGISGERIWVELKKILIGNHVNHLVRLLYELD 216
Query: 857 MFPHLGTDETFATLDFEGLFRS----MPIPFTLLFSANFFRNLARITTL 901
+ ++G + + + + ++ P P T+L S FR +T L
Sbjct: 217 VAQYIGLPVNGSLDELDRVSKNTESLCPKPMTVLTS--LFRGKDDVTNL 263
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQF 798
YQ+ ++ S+ T + I+EL+KY+ + +L+K+ +W +PTFP++G+ +R+
Sbjct: 299 YQDFIMDSRETNTISK--ILELLKYQGEEQLLKEMQQWTVPTFPVSGHDLRKM 349
>gi|28317079|gb|AAO39558.1| LP10544p [Drosophila melanogaster]
Length = 307
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 72/103 (69%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGTVYDYF G++DL++ FVG+ RI+ED+LRILRYFRF+ RI + NNH + L+
Sbjct: 24 FDGTVYDYFYGYDDLQERRVVFVGEADIRIKEDFLRILRYFRFYGRIASEENNHDKATLA 83
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
AIK N GL ISGERIW+EL KI+ G+F + L+M NL
Sbjct: 84 AIKENAKGLARISGERIWSELQKIVPGNFGAALFLEMHRCNLF 126
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + NNH + L+AIK+N GL ISGERIW+EL KI+ G+F + L+M N
Sbjct: 65 RFYGRIASEENNHDKATLAAIKENAKGLARISGERIWSELQKIVPGNFGAALFLEMHRCN 124
Query: 857 MFPHLG 862
+F ++G
Sbjct: 125 LFEYIG 130
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/23 (78%), Positives = 21/23 (91%)
Query: 916 FTEDWKLDANRRDLTVNSMFLGM 938
+T DW+LDANRRDLT+NSMFLG
Sbjct: 2 YTTDWQLDANRRDLTINSMFLGF 24
>gi|326928160|ref|XP_003210249.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Meleagris gallopavo]
Length = 385
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
LDG +YD+FNG+EDLK FVG +RIQEDYLRILRYFRF+ RI P +H+ L
Sbjct: 114 LDGMLYDFFNGYEDLKSKKIRFVGKATARIQEDYLRILRYFRFYGRIAEKPGDHESSTLQ 173
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
AIK N GL ISGERIW EL KIL G ++ ++LY
Sbjct: 174 AIKENAKGLAGISGERIWVELKKILIGKHVNHLV-RLLY 211
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG+
Sbjct: 74 ITTLRIDVVTDGRHAEVEFTTDWEKDAERRDLTINSMFLGL 114
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI P +H+ L AIK+N GL ISGERIW EL KIL G ++ + +++
Sbjct: 155 RFYGRIAEKPGDHESSTLQAIKENAKGLAGISGERIWVELKKILIGKHVNHLVRLLYDLD 214
Query: 857 MFPHLG 862
+ ++G
Sbjct: 215 VAQYIG 220
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQF 798
YQ+ ++ S+ +A T+ + I+EL+KY+ + +L+K+ +W +PTFP++G+ +R+
Sbjct: 297 YQDFIMDSR-EANTISK-ILELLKYQGEEQLLKEMQQWTVPTFPVSGHDLRKM 347
>gi|71995920|ref|NP_001023976.1| Protein HPO-31 [Caenorhabditis elegans]
gi|13548403|emb|CAB02125.2| Protein HPO-31 [Caenorhabditis elegans]
Length = 436
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 112/234 (47%), Gaps = 60/234 (25%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTAKVLSYR-------------- 617
MK+D+ +F + FTP+L +L +F K Y+LRIAG G V +++ R
Sbjct: 9 MKIDNEDFRTLFTPQLLKLRDLFAKRNYELRIAG-GAVRDLLMNIRPADVDFASTATPTQ 67
Query: 618 -------------NRREKED-----RIGENQPFRKLTLSVQ------------------D 641
++R +E RI + + F TL V D
Sbjct: 68 MKEMFEEDKIRMLHKRGEEHGTITCRIDDCENFEITTLRVDIVCDGRRAQVEYTTDWQLD 127
Query: 642 KDRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFAR 693
+R L G V DYF G D++ AFVGD RIQEDYLRILRYFRFF R
Sbjct: 128 ANRRDLTINSLFLDLHGNVVDYFGGIRDIETRRIAFVGDARQRIQEDYLRILRYFRFFGR 187
Query: 694 ICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
I ++ H+ + + AI N DG+ IS ERIWTEL KI+ G + E++ M+ Q
Sbjct: 188 I-SDCTEHEHDTIQAIVENKDGMAGISAERIWTELKKIVVGRMADEVLKAMIEQ 240
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM +P D+DFA+ ATP QMK MF E+K+R +++GE+HGT+ R++D ENFE+
Sbjct: 44 AVRDLLMNIRPADVDFASTATPTQMKEMFEEDKIRMLHKRGEEHGTITCRIDDCENFEIT 103
Query: 435 PVK 437
++
Sbjct: 104 TLR 106
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR+D+ DGR A+V++T DW+LDANRRDLT+NS+FL +
Sbjct: 102 ITTLRVDIVCDGRRAQVEYTTDWQLDANRRDLTINSLFLDL 142
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLE 854
+FF RI ++ H+ + + AI +N DG+ IS ERIWTEL KI+ G + E++ M+E
Sbjct: 183 RFFGRI-SDCTEHEHDTIQAIVENKDGMAGISAERIWTELKKIVVGRMADEVLKAMIE 239
>gi|237844427|ref|XP_002371511.1| sulfite oxidase, putative [Toxoplasma gondii ME49]
gi|211969175|gb|EEB04371.1| sulfite oxidase, putative [Toxoplasma gondii ME49]
gi|221501753|gb|EEE27513.1| sulfite oxidase, putative [Toxoplasma gondii VEG]
Length = 602
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 5/142 (3%)
Query: 13 AGEPISTLPWYSLSDIQNHKDLKSS--IWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGS 69
AGE LP+Y++SD++ H + +WV +R GVYD+T+F++ HPGG + ++ A G
Sbjct: 135 AGELREDLPFYTVSDVKEHGAVGEGKRLWVAYRHGVYDVTDFLEKHPGGRDRLLLAVGRD 194
Query: 70 IEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSL 129
++PFW +YG H V ELLES RIGNI++ + A+ D Y EPVR P L S
Sbjct: 195 LDPFWRVYGQHNLASVHELLESMRIGNIAKLEE--ASDSPLGDAYGNEPVRHPALVVRSE 252
Query: 130 KPYNAEPPPSMLVENFLTPSLL 151
KP+NAE P ++L ++F TP+ L
Sbjct: 253 KPFNAETPLALLTDDFFTPNDL 274
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKS-PAIQELPVISAICLPVADAKLKLE 307
K+ LS E SHWQQ DYK SPS + D +S P+I +LPV SAICLP +++ L
Sbjct: 475 KITLSPRECGSHWQQQDYKIMSPSDEPSNTDEWRSKPSIVDLPVQSAICLPTSESILPPG 534
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
+++++GYAW GGG+++VRVDV++D G TW A
Sbjct: 535 TEEVDLKGYAWCGGGRSVVRVDVSLDGGETWTEAEL 570
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 396 PDQMKAMFAEEKVRTFNEKGEKHGTVC---ARMNDKENFEVKP---VKGLTWGHAAVGNA 449
P+ K FA + K H C N +E+F K VKGL W A+GNA
Sbjct: 300 PNGEKKRFASFTLSDLQTKFYPHHLPCTLQCAGNRREDFNRKSGKRVKGLEWCGGAIGNA 359
Query: 450 TWTGARLVDVLKAAGISPDQSLDSADVQHVHVE 482
WTG L DVL+ G +++ ++H+H E
Sbjct: 360 LWTGCLLADVLRHCGFGEEEA-RRLGIRHIHFE 391
>gi|310800336|gb|EFQ35229.1| oxidoreductase molybdopterin binding domain-containing protein
[Glomerella graminicola M1.001]
Length = 579
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Query: 15 EPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFW 74
EP S P Y LS+++ H WV +R VYDIT++V HPGG++I++AAGG +EP+W
Sbjct: 95 EPDSPWPQYRLSEVKRHDRTSERPWVTYRTSVYDITDWVAAHPGGDVILRAAGGPVEPYW 154
Query: 75 AMYGVHLQ--DEVFELLESYRIGNISQEDSKLAAK-DIASDPYVMEPVRSPLLKATSLKP 131
++ +H Q D V +LE Y+IG + D L ++ D DP+ +P R P L+ + +P
Sbjct: 155 DIFSIHRQQLDNVLVILEGYKIGEVDGADVPLLSQGDGVDDPFADDPPRDPRLRTLTERP 214
Query: 132 YNAEPPPSMLVENFLTPSLL 151
NAE P L +F+TP++L
Sbjct: 215 RNAETPAEGL-GHFVTPTVL 233
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 71/120 (59%), Gaps = 13/120 (10%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPS----TDWDTVDFAKSPAIQELPVISAICLPVADAKL 304
++ LSD ES S WQ+ DYK F P DWD+ +PAIQE+PV SA+ +A
Sbjct: 409 RIALSDEESPSQWQRRDYKAFCPGEGSEPDWDS-----APAIQEMPVTSAVTAARVEAPG 463
Query: 305 KLENH--QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWR 362
+ +++ +GYA+SGGG+ IVRVDV+ D GRTW A+ +D+ A + W W WR
Sbjct: 464 APADRGRRIKAEGYAYSGGGREIVRVDVSTDGGRTWKTADLV-RDA-AVGKKAWCWKRWR 521
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 444 AAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVEIWSKAVDSSYNTQPESFANIW 503
AAVG W R + G+ D + V + + KA D +YNTQPES A+I+
Sbjct: 508 AAVGKKAWCWKRW----RYEGLIADGPGAGGHGEAVRLVV--KATDEAYNTQPESHASIY 561
Query: 504 NLRGVLSNAYHRVRV 518
N+RG L+ A+HRV V
Sbjct: 562 NVRGNLATAWHRVDV 576
>gi|221481205|gb|EEE19606.1| hypothetical protein TGGT1_054300 [Toxoplasma gondii GT1]
Length = 655
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 5/142 (3%)
Query: 13 AGEPISTLPWYSLSDIQNHKDLKSS--IWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGS 69
AGE LP+Y++SD++ H + +WV +R GVYD+T+F++ HPGG + ++ A G
Sbjct: 135 AGELREDLPFYTVSDVKEHGAVGEGKRLWVAYRHGVYDVTDFLEKHPGGRDRLLLAVGRD 194
Query: 70 IEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSL 129
++PFW +YG H V ELLES RIGNI++ + A+ D Y EPVR P L S
Sbjct: 195 LDPFWRVYGQHNLASVHELLESMRIGNIAKLEE--ASDSPLGDAYGNEPVRHPALVVRSE 252
Query: 130 KPYNAEPPPSMLVENFLTPSLL 151
KP+NAE P ++L ++F TP+ L
Sbjct: 253 KPFNAETPLALLTDDFFTPNDL 274
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKS-PAIQELPVISAICLPVADAKLKLE 307
K+ LS E SHWQQ DYK SPS + D +S P+I +LPV SAICLP +++ L
Sbjct: 475 KITLSPRECGSHWQQQDYKIMSPSDEPSNTDEWRSKPSIVDLPVQSAICLPTSESILPPG 534
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
+++++GYAW GGG+++VRVDV++D G TW A
Sbjct: 535 TEEVDLKGYAWCGGGRSVVRVDVSLDGGETWTEAEL 570
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 396 PDQMKAMFAEEKVRTFNEKGEKHGTVC---ARMNDKENFEVKP---VKGLTWGHAAVGNA 449
P+ K FA + K H C N +E+F K VKGL W A+GNA
Sbjct: 300 PNGEKKRFASFTLSDLQTKFYPHHLPCTLQCAGNRREDFNRKSGKRVKGLEWCGGAIGNA 359
Query: 450 TWTGARLVDVLKAAGISPDQSLDSADVQHVHVE 482
WTG L DVL+ G +++ ++H+H E
Sbjct: 360 LWTGCLLADVLRHCGFGEEEA-RRLGIRHIHFE 391
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 479 VHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRV 516
+ V +AVDS N+QPES IWN+RG ++N++H V
Sbjct: 598 IPVHAVCRAVDSQSNSQPESCKPIWNVRGCVNNSWHAV 635
>gi|402077622|gb|EJT72971.1| sulfite oxidase [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 745
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 85/138 (61%), Gaps = 5/138 (3%)
Query: 19 TLPWYSLSDIQ-NHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
+LP + L+DI+ +H WV ++ VYDIT++V HPGG++I++AAG SIEP+W ++
Sbjct: 124 SLPRHRLADIRADHGPGSDRPWVTYQDKVYDITDWVGAHPGGDVILRAAGASIEPYWDIF 183
Query: 78 GVHLQDEVFELLESYRIGNISQED----SKLAAKDIASDPYVMEPVRSPLLKATSLKPYN 133
+H V E+L+ Y +G I+ ED + L A + DP+ +P R P L + KP N
Sbjct: 184 TIHKAPHVREILDQYLVGLIAMEDLDRATGLPAAEAVEDPFATDPARDPRLITHTAKPRN 243
Query: 134 AEPPPSMLVENFLTPSLL 151
AEPP S L F+TP+ L
Sbjct: 244 AEPPASELAGEFVTPAEL 261
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 70/175 (40%), Gaps = 61/175 (34%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP----STDWD---------------------------- 276
++ ++D ESTS WQ+ DYK F P S DWD
Sbjct: 454 RIAIADEESTSQWQRRDYKCFGPNEGSSPDWDRYPAIQEMPITSAVTGIWVGGCVREAGK 513
Query: 277 --------TVDFAKSPAIQEL------------PVISAICLPVADAKLKLENHQME---- 312
T + +P +++L P +A PV A E
Sbjct: 514 KARWMLRRTDEHRAAPGVRDLSGWRREHHLDQPPPQTAKSSPVDAAPATATAADDETVPV 573
Query: 313 -VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF---TGQDSQAPL-TRHWGWTLWR 362
+ GYA+SGGGKAI+RVDV++D GRTW A G D + ++ W W WR
Sbjct: 574 ALMGYAYSGGGKAIIRVDVSVDGGRTWDQAELLDDCGPDGKGCRGSKAWAWRRWR 628
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA DS+YNTQPE+ I+N+RG L+ A+HRV V
Sbjct: 667 KATDSAYNTQPENHTGIYNVRGNLATAWHRVLV 699
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 436 VKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSA 474
GL WG A+ NA W G RL DVL AG+SP +A
Sbjct: 330 TNGLQWGVGAISNAEWEGVRLADVLLDAGLSPTSRCPTA 368
>gi|346322289|gb|EGX91888.1| Sulfite oxidase [Cordyceps militaris CM01]
Length = 657
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 84/137 (61%), Gaps = 4/137 (2%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
++LP Y LS+++ H WVV VYDITE++ HPGG +I++AAGGSIEP+W ++
Sbjct: 115 ASLPRYRLSEVKEHDGKAERPWVVHGDKVYDITEWISAHPGGSVILRAAGGSIEPYWNIF 174
Query: 78 GVHLQDEVFELLESYRIGNISQ---EDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNA 134
+H D V+++L+ Y IG + ED K +D DP+ +P+R P L ++KP NA
Sbjct: 175 AIHKNDYVYDILQQYLIGFVHPSDLEDGK-PPQDAIEDPFADDPIRHPDLITKTVKPRNA 233
Query: 135 EPPPSMLVENFLTPSLL 151
E P + FLTP+ L
Sbjct: 234 ETPGEAMSAQFLTPNDL 250
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 37/205 (18%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAIC------------ 296
++ LS+ ESTS WQ+ DYK F P+ VD+ K+PAIQELPV SAI
Sbjct: 425 QITLSEDESTSQWQRKDYKCFGPNQT--KVDWDKAPAIQELPVQSAITALRLGDWVKEPA 482
Query: 297 ----LPVADAKLKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDS 348
+P A A + E ++ + GYA+SGGG+AI+RVDV++D G+ W A
Sbjct: 483 VPASVPDAAATSQDEPAADGRKVTLSGYAFSGGGRAIIRVDVSVDSGKNWTQAYLLPDCD 542
Query: 349 QAPLTR--------HWGWTLW--RATIP--VDPKTKEVSIMDMLMGKKPHDIDFATNATP 396
P + W W W + IP V + + + + P D A++ P
Sbjct: 543 PKPGSPTSLCHGHGAWTWKRWMYKGVIPASVFAQGEPEKVESVENAVSP---DAASDPPP 599
Query: 397 DQMKAMFAEEKVRTFNEKGEKHGTV 421
+ + + +N + E H
Sbjct: 600 RRCTTLLVKATDEVYNCQPESHAAT 624
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 464 GISPDQSLDSADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
+SPD + D + + + KA D YN QPES A WN RG L+NA+HRV+V
Sbjct: 588 AVSPDAASDPPPRRCTTLLV--KATDEVYNCQPESHAATWNFRGNLANAWHRVQV 640
Score = 40.8 bits (94), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 434 KPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLD-SADVQHVH 480
+ GL W A+ NA W G L DVL+ AG DQ ++ +++V+HV
Sbjct: 318 RATNGLQWTAGAISNACWEGVLLSDVLRDAGFENDQGMNGTSEVKHVQ 365
>gi|339257798|ref|XP_003369085.1| poly(A) polymerase [Trichinella spiralis]
gi|316966728|gb|EFV51271.1| poly(A) polymerase [Trichinella spiralis]
Length = 750
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 104/230 (45%), Gaps = 56/230 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRI---------------------------- 603
MK++ TP L + +FEK GY++RI
Sbjct: 35 MKIEGDMLKCVLTPPLMEIKQLFEKKGYEIRIAGGAVRDLLLNIIPVDIDLATTARPEEM 94
Query: 604 --------------AGE--GTVTAKV-------LSYRNRREKEDRIGENQPFRKLTLSVQ 640
GE GTVT ++ + R + R E + L
Sbjct: 95 NQLFLENSIRVLNKGGEKHGTVTCRIQEQNFEITTLRVDKFCHGRHAEVEFTTDWFLDAS 154
Query: 641 DKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
+D + DGTVYDYF G +DLKK FVGDP RIQEDYLRILRYFRF+ R+
Sbjct: 155 RRDLTVNSMFMDFDGTVYDYFGGVDDLKKRRILFVGDPNQRIQEDYLRILRYFRFYGRLS 214
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
+ + H LSAIK+N +GL +ISGERIW EL +I+ G + ++ M
Sbjct: 215 DKSDEHDLSTLSAIKHNAEGLSSISGERIWLELKRIVVGRYGHSVIATMF 264
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 33/39 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR+D GRHAEV+FT DW LDA+RRDLTVNSMF+
Sbjct: 127 ITTLRVDKFCHGRHAEVEFTTDWFLDASRRDLTVNSMFM 165
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L+ P DID AT A P++M +F E +R N+ GEKHGTV R+ + +NFE+
Sbjct: 70 AVRDLLLNIIPVDIDLATTARPEEMNQLFLENSIRVLNKGGEKHGTVTCRIQE-QNFEIT 128
Query: 435 PVKGLTWGHAAVGNATWTGARLVD 458
++ + H +T +D
Sbjct: 129 TLRVDKFCHGRHAEVEFTTDWFLD 152
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ + + H LSAIK N +GL +ISGERIW EL +I+ G + ++ M +
Sbjct: 208 RFYGRLSDKSDEHDLSTLSAIKHNAEGLSSISGERIWLELKRIVVGRYGHSVIATMFDCG 267
Query: 857 MFPHLGTDETFATLDFEGLFRSMPI--PFTLLFSANFFRNLARITTL--RIDVTTDGR 910
++P++G + +F +F + P ++ + N +I L R+ ++T+ R
Sbjct: 268 IYPYIGLPKNPPIENFAEVFITAEAFKPLSITMISALLENEQQICDLNSRLKLSTEER 325
>gi|45360665|ref|NP_989006.1| tRNA nucleotidyl transferase, CCA-adding, 1 [Xenopus (Silurana)
tropicalis]
gi|38174205|gb|AAH61356.1| tRNA nucleotidyl transferase, CCA-adding, 1 [Xenopus (Silurana)
tropicalis]
Length = 405
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGT+YDYFNG+EDLK FVGD RIQEDYLRILRY RF+ RI H L
Sbjct: 133 FDGTLYDYFNGYEDLKNHCVKFVGDSSQRIQEDYLRILRYLRFYGRISKRSGAHTSGTLD 192
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
AIK N GL ISGERIW EL KIL G+ +M +++Y+
Sbjct: 193 AIKENASGLRGISGERIWVELKKILEGNHVNHLM-QIIYE 231
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L GK+PHD+DFAT ATPDQMK MF ++ VR N KGEKHGTV AR+ND +NFE+
Sbjct: 36 AVRDLLSGKQPHDVDFATTATPDQMKDMFLKQGVRLINNKGEKHGTVTARIND-QNFEIT 94
Query: 435 PVK 437
++
Sbjct: 95 TLR 97
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR+DV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 93 ITTLRVDVQTDGRHAEVEFTTDWETDAERRDLTINSMFLGF 133
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI H L AIK+N GL ISGERIW EL KIL G+ +M + E+
Sbjct: 174 RFYGRISKRSGAHTSGTLDAIKENASGLRGISGERIWVELKKILEGNHVNHLMQIIYELG 233
Query: 857 MFPHLGTD-----ETFATLDFEGLFRSMPIPFTLLFSANFFRNLARITTL 901
+ PH+G E FA + E R P P TLL + F N + L
Sbjct: 234 VAPHVGLPKGGNLEEFAKV-CERSHRMSPKPMTLLTA--LFSNTDHVQNL 280
>gi|339246807|ref|XP_003375037.1| sulfite oxidase [Trichinella spiralis]
gi|316971677|gb|EFV55423.1| sulfite oxidase [Trichinella spiralis]
Length = 566
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENH 309
++LS ES S WQQ+DYK F+PSTDW T +F+ AIQELPV SAIC P ++
Sbjct: 391 IVLSKDESPSQWQQSDYKTFNPSTDWPTANFSTVQAIQELPVQSAICSPAENSSFPRGTK 450
Query: 310 QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+ V+GYAWSGGG+ I+RV+V+ D G TWH A+ + R + WTLW +P
Sbjct: 451 TIAVKGYAWSGGGRDILRVEVSADNGNTWHSADLHLHIHERRNAR-FAWTLWTCEVP 506
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 83/136 (61%), Gaps = 4/136 (2%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP + +++ H + +WV FR GVYDITEFV +HPGG+IIM+A GG +EP W Y
Sbjct: 83 LPTFRAEEVKLHNEKDRKLWVTFRGGVYDITEFVDVHPGGKIIMQAVGGPLEPHWQRYNF 142
Query: 80 HLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKAT----SLKPYNAE 135
H Q++V+ +LE RIGN+ +D + A D + ++P +P L + S++P NAE
Sbjct: 143 HKQEDVYSMLEEMRIGNLHPDDVEDAIHDCNTVAEEVKPGYTPKLHPSMNVKSVQPLNAE 202
Query: 136 PPPSMLVENFLTPSLL 151
LVE+F TP+ L
Sbjct: 203 TGIGELVESFYTPNEL 218
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 5/60 (8%)
Query: 422 CARMNDKENFE-VKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA N +++F VKPV+GL WG A+GNA WTGA LVDVLK AG QS+ +HV
Sbjct: 269 CAG-NRRQDFNAVKPVRGLQWGPGAIGNAKWTGALLVDVLKEAGF---QSIVENGAEHVQ 324
>gi|310796510|gb|EFQ31971.1| oxidoreductase molybdopterin binding domain-containing protein
[Glomerella graminicola M1.001]
Length = 645
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 4/136 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYG 78
+LP ++LS+++ H S WV VYDITE+V HPGG++I++AAGGSI+P+W ++
Sbjct: 145 SLPRFTLSEVRKHDAKSKSPWVTQGDKVYDITEWVGAHPGGDVILRAAGGSIDPYWDIFT 204
Query: 79 VHLQDEVFELLESYRIGNISQE---DSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
+H V+E+L Y IG I D K A ++I DP+ +P R P L + KP NAE
Sbjct: 205 IHKSPHVYEILNQYLIGFIDSNDLVDGKPATQEI-EDPFKHDPARDPRLITLTPKPRNAE 263
Query: 136 PPPSMLVENFLTPSLL 151
PP L +++LTP+ L
Sbjct: 264 TPPEGLADSYLTPNEL 279
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 28/175 (16%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP---STDWDTVDFAKSPAIQELPVISAICL-------- 297
++ +SD ES S WQ+ DYK F P S DWD ++ IQE+P+ SAI
Sbjct: 451 QITISDEESHSQWQRKDYKCFGPNETSPDWD-----RAAPIQEMPITSAITTVRLGDWKT 505
Query: 298 ---PVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLT- 353
+A K + ++GYA+SGGG+ IVRVDV++D G TW A + +A +
Sbjct: 506 VEKNLASGSKKDSGREASLRGYAYSGGGRRIVRVDVSLDNGSTWDQAELLDDEHEAAPSK 565
Query: 354 ---RHWGWTLWR--ATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
R W W WR +P+ E L+ K D A N+ P+ +A++
Sbjct: 566 AGHRSWAWKRWRYEGIMPLGEPGDEGKRCSTLLVKA---TDEAYNSQPESYEAIY 617
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D +YN+QPES+ I+N RG L+NA+HR++V
Sbjct: 600 KATDEAYNSQPESYEAIYNQRGNLANAWHRLKV 632
>gi|342888226|gb|EGU87591.1| hypothetical protein FOXB_01876 [Fusarium oxysporum Fo5176]
Length = 618
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYG 78
+LP Y +++++ H WV+ R VYDITE++ HPGG++I++AAGGSI+P+W ++
Sbjct: 117 SLPRYRINEVRKHDAHSGHPWVIHRDKVYDITEWIGAHPGGDVILRAAGGSIDPYWDIFS 176
Query: 79 VHLQDEVFELLESYRIGNISQED--SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEP 136
+H D V+++L Y IG + D A++ DP+ +PVR P L + KP NAE
Sbjct: 177 IHKNDYVYDILNQYLIGYVDPADLVDGRPAREEVEDPFSDDPVRHPDLITMTQKPRNAET 236
Query: 137 PPSMLVENFLTPSLLSQV 154
P ++ +FLTP+ L V
Sbjct: 237 PAYAMMNDFLTPNDLFYV 254
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 71/126 (56%), Gaps = 15/126 (11%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAIC-LPVADAKLKLEN 308
V LSD ESTS WQ+ DYK F P+ VD+ +PAIQELPV SAI + D K +N
Sbjct: 426 VTLSDEESTSQWQRRDYKCFGPNQT--KVDWDSAPAIQELPVQSAITKCKLGDWTAKDDN 483
Query: 309 HQM-----EVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF-----TGQDSQAPLTRH--W 356
+ GYA+SGGG+AIVRVD++ D G+ W A+ T + ++P H W
Sbjct: 484 SHTYTKPASLAGYAYSGGGRAIVRVDISFDNGKNWSQASILPDCSTKEGEESPCYGHAAW 543
Query: 357 GWTLWR 362
W WR
Sbjct: 544 AWRRWR 549
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D YNTQPES A WN+RG L+ A+HRVR+
Sbjct: 574 KATDEVYNTQPESHAATWNIRGNLATAWHRVRI 606
>gi|324510078|gb|ADY44219.1| Sulfite oxidase [Ascaris suum]
Length = 569
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 80/132 (60%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP + L +++ H IWV ++ GVYDIT+FV+ HPGG+ I+ +AGG+++P+W +Y V
Sbjct: 101 LPTFRLEEVKKHGKDAEQIWVTYQSGVYDITDFVEAHPGGDKILLSAGGAVDPYWNVYDV 160
Query: 80 HLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPS 139
H V E++E R+GN+ D + DPY +P R P L S +P+NAE P
Sbjct: 161 HKTPLVIEMMEDMRVGNLDPRDIVVEEIRAEDDPYRHDPKRHPALLVNSQRPFNAETPAE 220
Query: 140 MLVENFLTPSLL 151
+L++ TP+ L
Sbjct: 221 LLLDASYTPNQL 232
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 252 LSDHESTSHWQQNDYKGFSPSTDW-DTVDFAKSPAIQELPVISAICLPVADAKLKLENHQ 310
+SD ES + WQ+ DY+ P+ D DF P+IQE PV A C P + K+ + +
Sbjct: 405 VSDEESDTQWQRKDYRALPPTIGHNDPHDFELVPSIQEYPVQCAFCRPAVNTKVHRSDEE 464
Query: 311 MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVDPK 370
+EV GYAWSGGG+ I++V V+ D G TW +A + Q L W WTL++AT+ +
Sbjct: 465 IEVAGYAWSGGGRGIIQVLVSPDGGNTWQLAELAHPEGQD-LDHMWSWTLFKATVKI--- 520
Query: 371 TKEVSIMDML 380
K+ MD++
Sbjct: 521 PKDAKYMDLV 530
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
++++ KA D SYNTQPE+ IWN+RG++ NA+H +RV+I
Sbjct: 526 YMDLVCKATDRSYNTQPETAIGIWNVRGLIHNAWHHIRVDI 566
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 409 RTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPD 468
R F + CA E + K V+GL W A+GNA WTG RL D+L AAG+ P+
Sbjct: 271 RKFQQVSVSATLQCAGNRRVEMAKFKKVQGLAWRGQAIGNAKWTGVRLRDILIAAGVDPN 330
>gi|367031532|ref|XP_003665049.1| hypothetical protein MYCTH_2308345 [Myceliophthora thermophila ATCC
42464]
gi|347012320|gb|AEO59804.1| hypothetical protein MYCTH_2308345 [Myceliophthora thermophila ATCC
42464]
Length = 760
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 88/151 (58%), Gaps = 11/151 (7%)
Query: 11 LRAGEPIST------LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMK 64
L+ P ST LP + L+D++ H S WV+F VYDIT++V HPGG++I++
Sbjct: 98 LQGAAPASTDDRDPSLPRFRLADVRKHDGSSSEPWVIFEDKVYDITDWVPAHPGGDVILR 157
Query: 65 AAGGSIEPFWAMYGVHLQDEVFELLESYRIGNIS----QEDSKLAAKDIASDPYVMEPVR 120
AAG SIEP+W ++ +H V E+L+ Y IG I D + AA+ I DP+V +PVR
Sbjct: 158 AAGSSIEPYWNIFTIHKAPHVREILQQYLIGFIDVADLGPDGRPAAEAI-EDPFVNDPVR 216
Query: 121 SPLLKATSLKPYNAEPPPSMLVENFLTPSLL 151
P L + KP NAEPP L F TP+ L
Sbjct: 217 DPRLITHTEKPRNAEPPNEELDRAFHTPNEL 247
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 311 MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQ--DSQAPL--TRHWGWTLWR--AT 364
+ +QGYA+SGGG+AI RVDV++D G+TW A D +P + W WT WR
Sbjct: 566 IAMQGYAYSGGGRAITRVDVSLDGGKTWDQAELVNDCADPASPCFGNKSWTWTRWRYVGA 625
Query: 365 IPV 367
+PV
Sbjct: 626 LPV 628
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 9/51 (17%)
Query: 249 KVILSDHESTSHWQQNDYKGF----SPSTDWDTVDFAKSPAIQELPVISAI 295
K+I+SD ES S WQ+ DYK F P+ DWD ++ +IQE+PV SAI
Sbjct: 435 KIIVSDEESHSQWQRRDYKSFGPNEGPNPDWD-----RAVSIQEMPVTSAI 480
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D +YNTQPES I+N+RG L+ A+HRV++
Sbjct: 671 KATDDAYNTQPESHRGIYNVRGNLATAWHRVKI 703
>gi|312077518|ref|XP_003141339.1| hypothetical protein LOAG_05754 [Loa loa]
gi|307763498|gb|EFO22732.1| hypothetical protein LOAG_05754 [Loa loa]
Length = 565
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 85/135 (62%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP Y + +++ H SIWV ++ GVYDIT F+Q HPGG+ I+ AAGG I+P+W +Y
Sbjct: 97 LPSYRMEEVKKHGKNAESIWVTYQGGVYDITNFIQSHPGGDKILLAAGGPIDPYWNIYQQ 156
Query: 80 HLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPS 139
HL +E E+LE RIGN+ + D + +DPY +P R P L S KP+NAE P
Sbjct: 157 HLTEETLEILEELRIGNLDERDIMVIEHKDENDPYCDDPKRHPALIVKSEKPFNAETPVE 216
Query: 140 MLVENFLTPSLLSQV 154
++++NF TP+ L V
Sbjct: 217 LIMDNFYTPNDLFYV 231
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTD-WDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++LS+ ES SHWQ+ DY+G P D +F +P+IQ+ PV SA C P A K+ N
Sbjct: 399 IVLSEEESKSHWQKRDYRGLPPFVGPTDHQNFELAPSIQDCPVQSAFCFPAAPTKIPRSN 458
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD 368
Q +V GYAWSGGG+ IVRV+V++D G TW A QD + + W WT +++TI +
Sbjct: 459 GQFDVMGYAWSGGGRGIVRVEVSMDGGETWQAAELI-QDPEQDIDHMWSWTFFKSTIKIP 517
Query: 369 PKTKEVSIM 377
K++ ++
Sbjct: 518 DDVKQLDLV 526
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 23/88 (26%)
Query: 447 GNATWTGARLVDVLKAAGISPDQSLDSA--------------DVQHVHVEIWSKAVDSSY 492
G TW A L+ P+Q +D DV+ + ++ KA D SY
Sbjct: 484 GGETWQAAELIQ-------DPEQDIDHMWSWTFFKSTIKIPDDVKQL--DLVCKATDRSY 534
Query: 493 NTQPESFANIWNLRGVLSNAYHRVRVEI 520
NTQP++ IWN+RG+L+NA+H V +EI
Sbjct: 535 NTQPDTSRGIWNIRGLLNNAWHHVPIEI 562
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPD 468
CA E +K V+GL W A+GNA WTGARL DVL AG+ P+
Sbjct: 280 CAGNRRSEMNAIKKVQGLNWKGTAIGNAKWTGARLKDVLMKAGVDPN 326
>gi|320589841|gb|EFX02297.1| sulfite oxidase [Grosmannia clavigera kw1407]
Length = 682
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 83/136 (61%), Gaps = 4/136 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYG 78
+LP Y L+DI+ H + WV VYDIT++V HPGG +I++AAGGSI+P+W ++
Sbjct: 137 SLPRYRLADIRKHDARSAMPWVTSGDKVYDITDWVAAHPGGPVILQAAGGSIDPYWDIFT 196
Query: 79 VHLQDEVFELLESYRIGNISQE---DSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
+H V+++L Y IG + D K AA DIA DP+ +PVR L + KP NAE
Sbjct: 197 IHKAPHVYDILAQYLIGLVDAADLVDGKPAATDIA-DPFASDPVRDGRLLTHTAKPCNAE 255
Query: 136 PPPSMLVENFLTPSLL 151
PPP+ L F+T + L
Sbjct: 256 PPPTELGRTFVTANEL 271
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 89/211 (42%), Gaps = 64/211 (30%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPST----DWDTVDFAKSPAIQELPVISAIC-------- 296
+V+++D ES S WQ+ DYK F P+ DWD + PAIQE+P+ SAI
Sbjct: 442 RVVVADEESPSQWQRRDYKLFGPNEGGKPDWD-----RYPAIQEMPLTSAITGIWVGREG 496
Query: 297 ------------------------------------LPVADAKLKLENHQMEVQGYAWSG 320
++ + +E + V GYA+SG
Sbjct: 497 IQKAGQQWLDETERQRRGDGARAAAGERGDPRTWQKEHLSSSITTVEPEPVAVTGYAYSG 556
Query: 321 GGKAIVRVDVTIDQGRTWHVANFTGQDSQ-------APLTRHWGWTLWR-ATIPVDPKTK 372
GG+ IVRVDV++D GRTW A + A TR W W WR A + PK
Sbjct: 557 GGREIVRVDVSLDGGRTWDQAELLDRRDDDGSGEIVARGTRDWAWKRWRYAGRLLPPKGD 616
Query: 373 EVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+V ++ K +D A N P++ ++
Sbjct: 617 DVHSCAEIVVKT---VDAAYNTQPERHDGIY 644
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 474 ADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
D H EI K VD++YNTQPE I+N+RG L+ A+HRVR+
Sbjct: 615 GDDVHSCAEIVVKTVDAAYNTQPERHDGIYNVRGNLATAWHRVRL 659
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 194 DSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLYSSLL 239
D K AA DIA DP+ +PVR L + KP NAEPPP+ L + +
Sbjct: 222 DGKPAATDIA-DPFASDPVRDGRLLTHTAKPCNAEPPPTELGRTFV 266
>gi|156364625|ref|XP_001626447.1| predicted protein [Nematostella vectensis]
gi|156213323|gb|EDO34347.1| predicted protein [Nematostella vectensis]
Length = 471
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V LS +S S WQQ YKG P + TVD + I ELPV S IC P L E
Sbjct: 303 GRVSLSKQKSQSMWQQTAYKGVPPCANQKTVDLQAAEDINELPVTSVICHPEEGETLLRE 362
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
++ + GYAWSGGG+ IVRVDV++D G+TW+ A+ G + P + W W+LW T P+
Sbjct: 363 EEEVTISGYAWSGGGRGIVRVDVSLDGGKTWNTASLDG--VKQPYGKAWAWSLWELTAPL 420
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ I+ +D + N PD + ++
Sbjct: 421 PAHGDRMEII-------CKAVDSSFNVQPDTVAPIY 449
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGE-IIMKAAGGSIEPFWAMYGVHL 81
+SLS++ H D ++ +W + GVYD+T+F++ HPGG+ +IM AAG ++P+W ++ H
Sbjct: 1 FSLSEVARHTDSRNGVWTTYEDGVYDLTDFIEQHPGGKRMIMLAAGSRLDPYWNIHDFHK 60
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
++++ ++L +RIG++ +E+ K + DPY +P R P L KP+ AEPP +L
Sbjct: 61 REDIVKILSEFRIGSLMKEEIKASTLLNLDDPYSTDPKRHPALTVFCNKPFLAEPPLGLL 120
Query: 142 VENFLTPS 149
+ +TP+
Sbjct: 121 GHSLITPT 128
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEIWSK 523
+EI KAVDSS+N QP++ A I+N RG L NA+HRV V + K
Sbjct: 427 MEIICKAVDSSFNVQPDTVAPIYNYRGYLCNAWHRVNVTLGEK 469
>gi|351708593|gb|EHB11512.1| tRNA-nucleotidyltransferase 1, mitochondrial, partial
[Heterocephalus glaber]
Length = 306
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 100/227 (44%), Gaps = 59/227 (25%)
Query: 573 KLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV----------------------- 609
KL SPEF S F LK L +F K ++LRIAG G V
Sbjct: 31 KLQSPEFQSLFMEGLKSLTELFIKENHELRIAG-GAVRDLLSGVKPQDVDFASTATPTKM 89
Query: 610 -----TAKVLSYRNRREKEDRIG-----ENQPFRKLTLSVQDKDRSFRL----------- 648
A + N+ EK I EN L + V R ++
Sbjct: 90 KEVFQAAGIRMINNKGEKHGAIAARLHEENFEITTLRIDVTTDRRHAKVEFTTDWQKDAE 149
Query: 649 -------------DGTVYDYFNGHEDLK-KGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
DGT++DYFNG+ DLK K FVG RIQEDYL+ILRYFRF+ RI
Sbjct: 150 RRDLTINSRFLGFDGTLFDYFNGYADLKNKKKVRFVGHAKKRIQEDYLQILRYFRFYGRI 209
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMM 741
+ P +H E L AI N GL ISGER W EL KIL G+ ++
Sbjct: 210 VDKPGDHDSETLEAIAENAKGLGGISGERTWVELKKILTGNHVNHLI 256
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 35/41 (85%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTD RHA+V+FT DW+ DA RRDLT+NS FLG
Sbjct: 122 ITTLRIDVTTDRRHAKVEFTTDWQKDAERRDLTINSRFLGF 162
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFA+ ATP +MK +F +R N KGEKHG + AR+++ ENFE+
Sbjct: 65 AVRDLLSGVKPQDVDFASTATPTKMKEVFQAAGIRMINNKGEKHGAIAARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGER W EL KIL G+ ++ + +++
Sbjct: 204 RFYGRIVDKPGDHDSETLEAIAENAKGLGGISGERTWVELKKILTGNHVNHLIHLISDLD 263
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFS 888
+ P++G + +F + +++ P P T+L S
Sbjct: 264 VAPYIGLPANASLEEFNKVSKNVDGFSPKPMTVLAS 299
>gi|358381628|gb|EHK19303.1| hypothetical protein TRIVIDRAFT_213747 [Trichoderma virens Gv29-8]
Length = 545
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
+P + +S+I+ H + WV VYDITE++ HPGG++I++AAGGSIEP+W ++ +
Sbjct: 1 MPRFRMSEIRKHDAKSTHPWVTHGDKVYDITEWISAHPGGQVILRAAGGSIEPYWNIFTI 60
Query: 80 HLQDEVFELLESYRIGNISQED--SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
H V+++L Y IG I Q D A++ DP+ +PVR P L ++KP NAE P
Sbjct: 61 HKNQYVYDILNQYLIGYIHQADLVDGKPAQETIEDPFADDPVRHPDLITRTMKPRNAETP 120
Query: 138 PSMLVENFLTPSLL 151
L F+TP+ L
Sbjct: 121 EQALSAQFITPNEL 134
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 19/152 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAIC--------LPVA 300
++ LSD ES S WQ+ DYK F P+ VD+ K+PAIQELPV SAI P
Sbjct: 309 QITLSDEESPSQWQRKDYKCFGPNQT--KVDWEKAPAIQELPVQSAITGVKLGEWTTPSQ 366
Query: 301 DAKLKLENHQMEV--QGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGW 358
+ EV GYA+SGGG++++RVDV++D G++W AN + + W W
Sbjct: 367 ETSSDSAEPAKEVALNGYAYSGGGRSVIRVDVSLDDGKSWSQANLLPDEESKYDGKSWSW 426
Query: 359 TLW--RATIPVDP-KTKEVSIMDMLMGKKPHD 387
W +P++ KT E D GK+ D
Sbjct: 427 KRWTFNGAVPLEAFKTPE----DGAAGKETDD 454
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D YNTQPES A WN RG L+ A+HRV+V
Sbjct: 487 KATDEVYNTQPESHAATWNFRGNLATAWHRVQV 519
>gi|444707489|gb|ELW48762.1| CCA tRNA nucleotidyltransferase 1, mitochondrial [Tupaia chinensis]
Length = 352
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 61/88 (69%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ RI + P +H E L
Sbjct: 80 FDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDKPGDHDPETLE 139
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGS 735
AI N GL ISGERIW EL KIL G+
Sbjct: 140 AIAENAKGLAGISGERIWVELKKILVGN 167
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 40 ITTLRIDVVTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 80
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + +++
Sbjct: 121 RFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLD 180
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITT--LRIDVTTDGR 910
+ P++G + +F + +++ P P TLL A+ F+ +T LR+ ++ + +
Sbjct: 181 VAPYIGLPANASFEEFNKVSKNVEGFSPKPMTLL--ASLFKVQDDVTKLDLRLKISKEEK 238
Query: 911 HAEVQFTEDWKLDANRRDL 929
+ + + NR+DL
Sbjct: 239 NLGLFLVK------NRKDL 251
Score = 43.1 bits (100), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 398 QMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVK 437
MK MF +R N KGEKHGT+ AR+++ ENFE+ ++
Sbjct: 6 HMKDMFQAAGIRMINNKGEKHGTITARLHE-ENFEITTLR 44
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T+R + EL+KY+ + L+KD +W +P FP++G+ IR+
Sbjct: 264 YQDFIIDSREPDATLR--VCELLKYQGEHCLLKDMQQWSVPPFPVSGHDIRK 313
>gi|294896694|ref|XP_002775685.1| sulfite reductase, putative [Perkinsus marinus ATCC 50983]
gi|239881908|gb|EER07501.1| sulfite reductase, putative [Perkinsus marinus ATCC 50983]
Length = 559
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 90/155 (58%), Gaps = 6/155 (3%)
Query: 3 DGVKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EI 61
+G++ GEP+ L Y ++ + H S++WV F+QGVYDITEFV HPGG +
Sbjct: 32 EGIEGKWHPHFGEPVEGLKTYKIAQVAEHNKEGSTVWVTFKQGVYDITEFVAKHPGGKDK 91
Query: 62 IMKAAGGSIEPFWAMYGVHLQ-DEVFELLESYRIGNISQEDSKLAAKD---IASDPYVME 117
I+ AAGG+++ FW +Y HLQ E+ +LE RIGN+ E+ A ++ DPY E
Sbjct: 92 ILMAAGGAVDEFWRLYRQHLQLPEISHMLEEMRIGNLDPEEYAQANRESVKSGDDPYRFE 151
Query: 118 P-VRSPLLKATSLKPYNAEPPPSMLVENFLTPSLL 151
P R P L+ + P NAE P +L + F TP+ L
Sbjct: 152 PDHRHPALQFRTRHPCNAEAPLELLADAFETPNAL 186
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V L ES S WQ+NDYK S + + + A+Q + +++ A N
Sbjct: 380 RVCLELEESPSFWQKNDYKFLQVSFEHSEENAEDAEALQM--IRTSLYAKGEVAGTNPGN 437
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH---WGWTLWRATI 365
+ YA+SGGG+ + VDV+ID G+TW A G P RH W W LW A I
Sbjct: 438 GILTRFMYAYSGGGRRVKEVDVSIDGGKTWSQAMMEGH----PEVRHDRNWSWVLWSAVI 493
Query: 366 PVDPKTKEVSIMDM 379
+ P S++++
Sbjct: 494 SIPPGGAGTSLVNV 507
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+A D + NTQPE A IWN+RG+++N++H+V+V +
Sbjct: 521 RAFDDANNTQPERSATIWNVRGLVNNSWHKVKVRV 555
>gi|400603331|gb|EJP70929.1| oxidoreductase molybdopterin binding domain-containing protein
[Beauveria bassiana ARSEF 2860]
Length = 596
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
++LP Y LS+++ H WV+ VYDITE+V HPGG +I++AAGGSIEP+W ++
Sbjct: 53 ASLPRYRLSEVKEHDGNSERPWVIHGDKVYDITEWVSAHPGGSVILRAAGGSIEPYWNIF 112
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLA--AKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
+H V+++L+ Y IG + D K +D DP+ +P+R P L + KP NAE
Sbjct: 113 AIHKNQYVYDILQQYLIGFVHPADLKDGKPPQDAIEDPFADDPIRHPDLITKTAKPRNAE 172
Query: 136 PPPSMLVENFLTPSLL 151
P + FLTP+ L
Sbjct: 173 TPDEAMSAQFLTPNEL 188
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAI-CLPVAD------ 301
++ LS+ ESTS WQ+ DYK F P+ VD+ K+PAIQELPV SAI L + D
Sbjct: 363 QITLSEDESTSQWQRKDYKCFGPNQT--EVDWDKAPAIQELPVQSAITALKLGDWVKEPA 420
Query: 302 ----------AKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF---TGQDS 348
A + ++ V GYA+SGGG++I+RVDV++D GR W A
Sbjct: 421 DAADASQDEPAAATADARKLTVSGYAYSGGGRSIIRVDVSVDAGRNWTQAYLLPDCDPKP 480
Query: 349 QAPLTRH----WGWTLW--RATIPV 367
AP H W W W + IP
Sbjct: 481 DAPSLCHGHAAWAWKRWMYKGVIPA 505
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
I KA D YN QPES A WN RG L+NA+HRV+V
Sbjct: 550 ILVKATDEVYNCQPESHAATWNFRGNLANAWHRVQV 585
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 434 KPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLD-SADVQHVH 480
+ GL W A+ NA+W G L DVL+ AG DQ + +++V+HV
Sbjct: 256 RATNGLQWTAGAISNASWEGVLLADVLRDAGFENDQGMSGTSEVKHVQ 303
>gi|408389126|gb|EKJ68610.1| hypothetical protein FPSE_11207 [Fusarium pseudograminearum CS3096]
Length = 601
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
S+LP Y + +++ H W++ R VYDITE++ HPGG+II++AAGGSI+ +W ++
Sbjct: 103 SSLPCYRIDEVRKHDARSDHPWIIHRDKVYDITEWIGAHPGGDIILRAAGGSIDRYWDIF 162
Query: 78 GVHLQDEVFELLESYRIGNISQED--SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
+H D V+++L Y IG + ED + ++D DP+ +P R P L + KP NAE
Sbjct: 163 AIHKNDYVYDILNQYLIGYVDPEDLVNGRPSQDEIEDPFSDDPSRHPALVTMTEKPRNAE 222
Query: 136 PPPSMLVENFLTPSLL 151
P + + FLTP+ L
Sbjct: 223 TPANAMTNEFLTPNDL 238
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 75/131 (57%), Gaps = 18/131 (13%)
Query: 250 VILSDHESTSHWQQNDYKGFSPS---TDWDTVDFAKSPAIQELPVISAIC-LPVADAKLK 305
V LSD EST+ WQ+ DYK F P+ DWDT +P+IQE+PV SAI + D K
Sbjct: 413 VTLSDEESTTQWQRRDYKCFGPNQTQVDWDT-----APSIQEMPVQSAITTCKLGDWKKS 467
Query: 306 LENHQ--MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF-----TGQDSQAPLTRH--W 356
+ + + GYA+SGGG+AIVRVDV+ D G+TW A+ T + Q+P H W
Sbjct: 468 DDTYTKPASLTGYAYSGGGRAIVRVDVSADNGKTWSQASIIPDCSTKEGEQSPCFGHAAW 527
Query: 357 GWTLWRATIPV 367
W W+ PV
Sbjct: 528 AWRRWKFDGPV 538
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 432 EVKPVKGLTWGHAAV---------------GNATWTGARLVDVLKAAGISPDQSLDSADV 476
+V G TW A++ G+A W R K G P + ++++
Sbjct: 493 DVSADNGKTWSQASIIPDCSTKEGEQSPCFGHAAWAWRRW----KFDGPVPLSAFETSES 548
Query: 477 QHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
+ KA D +YNTQPES+A WN+RG L+ A+HRV+V
Sbjct: 549 GKRYATFVVKATDEAYNTQPESYAATWNIRGNLATAWHRVKV 590
>gi|401396124|ref|XP_003879759.1| unnamed protein product [Neospora caninum Liverpool]
gi|325114166|emb|CBZ49724.1| unnamed protein product [Neospora caninum Liverpool]
Length = 484
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 20 LPWYSLSDIQNHKDLKSS--IWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAM 76
LP+Y++SD++ H + +WV +R+G+YD+T+F+ HPGG + ++ A G ++PFW +
Sbjct: 5 LPFYTVSDLKEHGTVGEGKRLWVAYRRGIYDVTDFLDKHPGGRDRLLLAVGRELDPFWRV 64
Query: 77 YGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEP 136
YG H D V ELLES RIGN+ + + A+ D Y EP+R P L S KP+NAE
Sbjct: 65 YGQHNLDSVHELLESMRIGNLVKLEE--ASDSALEDAYGNEPLRHPALIVRSEKPFNAET 122
Query: 137 PPSMLVENFLTPSLL 151
P ++L ++F TP+ L
Sbjct: 123 PLTLLADDFFTPNDL 137
>gi|46126245|ref|XP_387676.1| hypothetical protein FG07500.1 [Gibberella zeae PH-1]
Length = 601
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMY 77
S+LP Y + +++ H W++ R VYDITE++ HPGG+II++AAGGSI+ +W ++
Sbjct: 103 SSLPCYRIDEVRKHDARSDHPWIIHRDKVYDITEWIGAHPGGDIILRAAGGSIDRYWDIF 162
Query: 78 GVHLQDEVFELLESYRIGNISQED--SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
+H D V+++L Y IG + ED + ++D DP+ +P R P L + KP NAE
Sbjct: 163 AIHKNDYVYDILNQYLIGYVDPEDLVNGRPSQDEIEDPFSDDPSRHPALVTMTEKPRNAE 222
Query: 136 PPPSMLVENFLTPSLLSQV 154
P + + FLTP+ L V
Sbjct: 223 TPANAMTNEFLTPNDLFYV 241
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 75/131 (57%), Gaps = 18/131 (13%)
Query: 250 VILSDHESTSHWQQNDYKGFSPS---TDWDTVDFAKSPAIQELPVISAIC-LPVADAKLK 305
V LSD EST+ WQ+ DYK F P+ DWDT +P+IQE+PV SAI + D K
Sbjct: 413 VTLSDEESTTQWQRRDYKCFGPNQTQVDWDT-----APSIQEMPVQSAITTCKLGDWKKS 467
Query: 306 LENHQ--MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF-----TGQDSQAPLTRH--W 356
+ + + GYA+SGGG+AIVRVDV+ D G+TW A+ T + Q+P H W
Sbjct: 468 DDTYTKPASLTGYAYSGGGRAIVRVDVSADNGKTWSQASIIPDCSTKEGEQSPCFGHAAW 527
Query: 357 GWTLWRATIPV 367
W W+ PV
Sbjct: 528 AWRRWKFDGPV 538
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 432 EVKPVKGLTWGHAAV---------------GNATWTGARLVDVLKAAGISPDQSLDSADV 476
+V G TW A++ G+A W R K G P + +++D
Sbjct: 493 DVSADNGKTWSQASIIPDCSTKEGEQSPCFGHAAWAWRRW----KFDGPVPLSAFETSDS 548
Query: 477 QHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
+ KA D +YNTQPES+A WN+RG L+ A+HRV+V
Sbjct: 549 GKRYATFVVKATDEAYNTQPESYAATWNIRGNLATAWHRVKV 590
>gi|291408736|ref|XP_002720670.1| PREDICTED: CG2100-like [Oryctolagus cuniculus]
Length = 431
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 58/87 (66%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ R+ P H E L
Sbjct: 157 FDGTLFDYFNGYEDLKNKKVRFVGQAKQRIQEDYLRILRYFRFYGRVVEKPGEHDPETLE 216
Query: 708 AIKNNLDGLHNISGERIWTELNKILGG 734
AI N GL ISGERIW EL KIL G
Sbjct: 217 AIAENAHGLAGISGERIWVELKKILTG 243
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 117 ITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 157
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF VR N KGEKHGTV AR+++ ENFE+
Sbjct: 60 AVRDLLAGVKPQDVDFATTATPAQMKQMFQAAGVRMINNKGEKHGTVTARLHE-ENFEIT 118
Query: 435 PVK 437
++
Sbjct: 119 TLR 121
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ P H E L AI +N GL ISGERIW EL KIL G ++ + +++
Sbjct: 198 RFYGRVVEKPGEHDPETLEAIAENAHGLAGISGERIWVELKKILTGRHVHHLVHLIYDLH 257
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTL 901
+ PH+G + + +F + +++ P P T+L A+ F+ +T L
Sbjct: 258 VAPHIGLPASASLEEFNKVTKNVEGFSPKPMTVL--ASLFKAQDDVTKL 304
>gi|380488412|emb|CCF37391.1| oxidoreductase molybdopterin binding domain-containing protein
[Colletotrichum higginsianum]
Length = 659
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 4/134 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYG 78
TLP ++LS+++ H S WV VYDITE+V HPGG++I++AAGGSI+P+W ++
Sbjct: 154 TLPRFALSEVRKHDAKSQSPWVTQGDKVYDITEWVGAHPGGDVILRAAGGSIDPYWDIFT 213
Query: 79 VHLQDEVFELLESYRIGNISQE---DSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
+H V+E+L Y IG I D K AA++I DP+ +P R P L + KP NAE
Sbjct: 214 IHKSPHVYEILNQYHIGFIDPNDLVDGKPAAEEI-EDPFKHDPSRDPRLITLTPKPRNAE 272
Query: 136 PPPSMLVENFLTPS 149
P L +++LTP+
Sbjct: 273 TPVEGLADSYLTPN 286
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 31/176 (17%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP---STDWDTVDFAKSPAIQELPVISAICL-------- 297
++ +SD ES S WQ+ DYK F P S DWD ++ IQE+P+ SAI
Sbjct: 460 QITISDEESHSQWQRKDYKCFGPNETSPDWD-----RAAPIQEMPITSAITTVRLGDWKE 514
Query: 298 ----PVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLT 353
P +DAK + + + GYA+SGGG+ IVRVDV++D G+TW A ++ P
Sbjct: 515 STRGPASDAKTS-DAREASLMGYAYSGGGRRIVRVDVSLDNGKTWDQAELLDENETLPPK 573
Query: 354 ---RHWGWTLWR--ATIPV-DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ W W WR +P+ +P +L+ D A N+ P+ +A++
Sbjct: 574 AGHKSWAWKRWRYKGIVPLGEPGVGSKKCSTLLVKA----TDDAYNSQPESYEAIY 625
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D +YN+QPES+ I+N RG L+NA+HR+R+
Sbjct: 608 KATDDAYNSQPESYEAIYNQRGNLANAWHRLRI 640
>gi|440888803|gb|ELR44591.1| tRNA-nucleotidyltransferase 1, mitochondrial [Bos grunniens mutus]
Length = 434
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 61/88 (69%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ +I + P +H E L
Sbjct: 162 FDGTLFDYFNGYEDLKNKKVRFVGQAKQRIQEDYLRILRYFRFYGKIVDTPGDHDPETLE 221
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGS 735
AI N GL +SGERIW EL KIL G+
Sbjct: 222 AIAENAKGLAGVSGERIWVELKKILTGN 249
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVATDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK +F +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLSGVKPQDVDFATTATPAQMKELFQSVGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ +I + P +H E L AI +N GL +SGERIW EL KIL G+ ++ + E++
Sbjct: 203 RFYGKIVDTPGDHDPETLEAIAENAKGLAGVSGERIWVELKKILTGNHVNHLIHLIYELD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTLRIDVTTDGRHA 912
+ P++G + +F + +++ P P TLL S ++ LR+ ++ + ++
Sbjct: 263 VAPYIGLPANASLEEFNKVSKNVEGFSPKPMTLLTSLFKVQDDVTKLDLRLKISKEEKNL 322
Query: 913 EVQFTEDWKLDANRRDL 929
+ + NR+DL
Sbjct: 323 GLFIVK------NRKDL 333
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREADATAR--VCELLKYQGEHGLLKQMRQWSIPPFPVSGHDIRK 395
>gi|426249254|ref|XP_004018365.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial [Ovis
aries]
Length = 436
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 61/88 (69%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ +I + P +H E L
Sbjct: 162 FDGTLFDYFNGYEDLKNKKVRFVGQAKQRIQEDYLRILRYFRFYGKIVDMPGDHDPETLE 221
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGS 735
AI N GL ISGERIW EL KIL G+
Sbjct: 222 AIAENAKGLAGISGERIWVELKKILTGN 249
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVATDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK +F +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLSGVKPQDVDFATTATPAQMKELFQSVGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ +I + P +H E L AI +N GL ISGERIW EL KIL G+ ++ + E++
Sbjct: 203 RFYGKIVDMPGDHDPETLEAIAENAKGLAGISGERIWVELKKILTGNHVNHLIHLIYELD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTLRIDVTTDGRHA 912
+ P++G + +F + +++ P P TLL S ++ LR+ ++ + ++
Sbjct: 263 VAPYIGLPANTSLEEFNKVSKNVEGFSPKPMTLLTSLFKVQDDVTKLDLRLKISKEEKNL 322
Query: 913 EVQFTEDWKLDANRRDL 929
+ + NR+DL
Sbjct: 323 GLFIVK------NRKDL 333
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREADATAR--VCELLKYQGEHGLLKQLQQWSIPPFPVSGHDIRK 395
>gi|114326216|ref|NP_001039341.1| CCA tRNA nucleotidyltransferase 1, mitochondrial [Bos taurus]
gi|92096972|gb|AAI14832.1| TRNA nucleotidyl transferase, CCA-adding, 1 [Bos taurus]
gi|296474963|tpg|DAA17078.1| TPA: tRNA nucleotidyl transferase, CCA-adding, 1 [Bos taurus]
Length = 434
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 60/87 (68%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ +I + P +H E L
Sbjct: 162 FDGTLFDYFNGYEDLKNKKVRFVGQAKQRIQEDYLRILRYFRFYGKIVDTPGDHDPETLE 221
Query: 708 AIKNNLDGLHNISGERIWTELNKILGG 734
AI N GL +SGERIW EL KIL G
Sbjct: 222 AIAENAKGLAGVSGERIWVELKKILTG 248
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVATDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK +F +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLSGVKPQDVDFATTATPAQMKELFQSVGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 10/137 (7%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ +I + P +H E L AI +N GL +SGERIW EL KIL G ++ + E++
Sbjct: 203 RFYGKIVDTPGDHDPETLEAIAENAKGLAGVSGERIWVELKKILTGDHVNHLIHLIYELD 262
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITTLRIDVTTDGRHA 912
+ P++G + +F + +++ P P TLL S ++ LR+ ++ + ++
Sbjct: 263 VAPYIGLPANASLEEFNKVSKNVEGFSPKPMTLLTSLFKVQDDVTKLDLRLKISKEEKNL 322
Query: 913 EVQFTEDWKLDANRRDL 929
+ + NR+DL
Sbjct: 323 GLFIVK------NRKDL 333
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 746 YQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQ 797
YQ+ ++ S+ T R + EL+KY+ + L+K +W +P FP++G+ IR+
Sbjct: 346 YQDFIIDSREADATAR--VCELLKYQGEHGLLKQMQQWSIPPFPVSGHDIRK 395
>gi|57491651|gb|AAW51389.1| GekBS073P [Gekko japonicus]
Length = 178
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 61/88 (69%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGT++DYFNG+EDLK FVG RIQEDYLRILRYFRF+ +I + P +H E L
Sbjct: 5 FDGTLFDYFNGYEDLKNKKVRFVGQAKQRIQEDYLRILRYFRFYGKIVDKPGDHDPETLE 64
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGS 735
AI N GL ISGERIW EL KIL G+
Sbjct: 65 AIAENAKGLAGISGERIWVELKKILTGN 92
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ +I + P +H E L AI +N GL ISGERIW EL KIL G+ ++ M +++
Sbjct: 46 RFYGKIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILTGNHVNHLIHLMYDLD 105
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFS 888
+ P++G + +F + +++ P P TLL S
Sbjct: 106 VAPYIGLPANASLEEFNKVSKNVEGFSPKPMTLLTS 141
>gi|391326646|ref|XP_003737823.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Metaseiulus occidentalis]
Length = 488
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 139/308 (45%), Gaps = 38/308 (12%)
Query: 539 SGYQPRATLQGARLLTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHG 598
+GYQ R R L PH + +F S TP ++ +FE G
Sbjct: 70 NGYQLRIAGGAVRDLLMGITPHDI---------------DFASTATP--TQMKELFESEG 112
Query: 599 YQL-RIAGE--GTVTAKVLSYRNRREKEDRI-----GENQPFRKLTLSVQDKDRS----- 645
++ +GE GT+TA+V N R+ G + T D +R
Sbjct: 113 IRMINASGERHGTITARVNDKENFEITTLRVDTVTDGRHAEVEFTTDWQMDANRRDLTVN 172
Query: 646 ---FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHK 702
DGTV+DYF G E L + FVGD RIQEDYLRILRYFRF+ R+ + N H
Sbjct: 173 AMFLSFDGTVFDYFKGIEHLAQRKVLFVGDAARRIQEDYLRILRYFRFYGRLAVDENAHD 232
Query: 703 EEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMRE 762
L AI+ N DGL ++SGER++TEL KI+ G F M+ M +L +
Sbjct: 233 ASTLEAIRLNTDGLASVSGERLYTELQKIVDGRFHHSMIRLMAELGVLQYLGFPRNP--- 289
Query: 763 YIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVLSAIKKNLD 822
+ E + ++ + ++ +L + I Q AR+ +N ++ +L I + +
Sbjct: 290 NLDEFSRVCKRCQDLEALAPTKLAALLRTEDEIMQLHARL--KLSNFEKHLLLYINRYRN 347
Query: 823 GLHNISGE 830
L N+S E
Sbjct: 348 ALSNLSDE 355
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG PHDIDFA+ ATP QMK +F E +R N GE+HGT+ AR+NDKENFE+
Sbjct: 80 AVRDLLMGITPHDIDFASTATPTQMKELFESEGIRMINASGERHGTITARVNDKENFEIT 139
Query: 435 PVK 437
++
Sbjct: 140 TLR 142
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR+D TDGRHAEV+FT DW++DANRRDLTVN+MFL
Sbjct: 138 ITTLRVDTVTDGRHAEVEFTTDWQMDANRRDLTVNAMFL 176
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ R+ + N H L AI+ N DGL ++SGER++TEL KI+ G F M+ M E+
Sbjct: 219 RFYGRLAVDENAHDASTLEAIRLNTDGLASVSGERLYTELQKIVDGRFHHSMIRLMAELG 278
Query: 857 MFPHLG 862
+ +LG
Sbjct: 279 VLQYLG 284
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 560 HSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG 605
S R K G MKL++ +F +PE+K + +F+K+GYQLRIAG
Sbjct: 33 RSKRVKLGKLETMKLENDQFRRILSPEMKVVEELFKKNGYQLRIAG 78
>gi|389628368|ref|XP_003711837.1| sulfite oxidase [Magnaporthe oryzae 70-15]
gi|351644169|gb|EHA52030.1| sulfite oxidase [Magnaporthe oryzae 70-15]
Length = 659
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
Query: 21 PWYSLSDIQN-HKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
P + LSDI++ H + WV F VYDIT++V HPGG++I++AAGG+IEP+W ++ +
Sbjct: 83 PRHRLSDIRDQHGPGSKNPWVTFEDKVYDITDWVGAHPGGDVILRAAGGAIEPYWDIFTI 142
Query: 80 HLQDEVFELLESYRIGNISQED----SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
H V E+L+ Y IG I+ ED + A + DP+ +P R L + KP NAE
Sbjct: 143 HKATHVREILDQYMIGYIAIEDLDQRTGRPAAETIEDPFSTDPARDQRLIKHTAKPCNAE 202
Query: 136 PPPSMLVENFLTPSLL 151
PPP L + F+TP L
Sbjct: 203 PPPEELGKEFITPPEL 218
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 73/218 (33%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPST----DWDTVDFAKSPAIQELPVISAI-------C- 296
K+++SD ES S WQ+ DYK F P+ DWD + PAIQE+P+ SA C
Sbjct: 402 KIVVSDEESPSQWQRRDYKCFGPNEGAKPDWD-----RYPAIQEMPITSATTGVWVGDCV 456
Query: 297 -----------------------------LPV--------ADAK--LKLENHQ----MEV 313
LP D K LK+++ + M +
Sbjct: 457 RAAAAAAKSGTEWMLRRTDEARAAPGVRDLPAWQREHLNSKDPKYALKMDSTEGDVPMAL 516
Query: 314 QGYAWSGGGKAIVRVDVTIDQGRTWHVANF------TGQDSQAPLTRHWGWTLWR--ATI 365
GYA+SGGGK I+RVDV++D G TW A G++ + +++W W WR ++
Sbjct: 517 MGYAYSGGGKHIIRVDVSVDGGNTWAQAELLDDCGPEGKNCRG--SKYWAWRRWRYFGSL 574
Query: 366 PVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P +T+ ++ K D A N P+Q ++
Sbjct: 575 PELAETRGDKGCTTVLVKA---TDLAYNTQPEQHTGIY 609
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D +YNTQPE I+N+RG L+ A+HR+ V
Sbjct: 592 KATDLAYNTQPEQHTGIYNVRGNLATAWHRLLV 624
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 438 GLTWGHAAVGNATWTGARLVDVLKAAGISPDQ---------SLDSADVQHVHVEI 483
GL WG A+ NA W G RL DVL AG+ P Q S AD +HV+
Sbjct: 289 GLQWGVGAISNANWEGVRLADVLLDAGLKPAQFASTAVAKDSQGDADSGEMHVQF 343
>gi|440463611|gb|ELQ33181.1| sulfite oxidase [Magnaporthe oryzae Y34]
gi|440479175|gb|ELQ59958.1| sulfite oxidase [Magnaporthe oryzae P131]
Length = 719
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
Query: 21 PWYSLSDIQN-HKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
P + LSDI++ H + WV F VYDIT++V HPGG++I++AAGG+IEP+W ++ +
Sbjct: 143 PRHRLSDIRDQHGPGSKNPWVTFEDKVYDITDWVGAHPGGDVILRAAGGAIEPYWDIFTI 202
Query: 80 HLQDEVFELLESYRIGNISQED----SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
H V E+L+ Y IG I+ ED + A + DP+ +P R L + KP NAE
Sbjct: 203 HKATHVREILDQYMIGYIAIEDLDQRTGRPAAETIEDPFSTDPARDQRLIKHTAKPCNAE 262
Query: 136 PPPSMLVENFLTPSLL 151
PPP L + F+TP L
Sbjct: 263 PPPEELGKEFITPPEL 278
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 73/218 (33%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPST----DWDTVDFAKSPAIQELPVISAI-------C- 296
K+++SD ES S WQ+ DYK F P+ DWD + PAIQE+P+ SA C
Sbjct: 462 KIVVSDEESPSQWQRRDYKCFGPNEGAKPDWD-----RYPAIQEMPITSATTGVWVGDCV 516
Query: 297 -----------------------------LPV--------ADAK--LKLENHQ----MEV 313
LP D K LK+++ + M +
Sbjct: 517 RAAAAAAKSGTEWMLRRTDEARAAPGVRDLPAWQREHLNSKDPKYALKMDSTEGDVPMAL 576
Query: 314 QGYAWSGGGKAIVRVDVTIDQGRTWHVANF------TGQDSQAPLTRHWGWTLWR--ATI 365
GYA+SGGGK I+RVDV++D G TW A G++ + +++W W WR ++
Sbjct: 577 MGYAYSGGGKHIIRVDVSVDGGNTWAQAELLDDCGPEGKNCRG--SKYWAWRRWRYFGSL 634
Query: 366 PVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P +T+ ++ K D A N P+Q ++
Sbjct: 635 PELAETRGDKGCTTVLVKA---TDSAYNTQPEQHTGIY 669
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA DS+YNTQPE I+N+RG L+ A+HR+ V
Sbjct: 652 KATDSAYNTQPEQHTGIYNVRGNLATAWHRLLV 684
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 436 VKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQ---------SLDSADVQHVHVEI 483
GL WG A+ NA W G RL DVL AG+ P Q S AD +HV+
Sbjct: 347 TNGLQWGVGAISNANWEGVRLADVLLDAGLKPAQFASTAVAKDSQGDADSGEMHVQF 403
>gi|340380071|ref|XP_003388547.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Amphimedon queenslandica]
Length = 400
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S DG +YDYF+G + L + FVGD VSRIQEDYLRILRYFRF+ RIC PN H +
Sbjct: 133 SLGFDGKLYDYFDGQKHLAERKLLFVGDAVSRIQEDYLRILRYFRFYGRICLLPNAHDPD 192
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
L+AI++N GL IS ERIW+E+++IL G+ S ++ ++Y+
Sbjct: 193 TLTAIRDNAVGLTKISVERIWSEMSRILVGNHSPHLV-SLMYE 234
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 32/41 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID TDGRHA VQFT DW DA RRDLT+NSM LG
Sbjct: 96 ITTLRIDHVTDGRHALVQFTSDWVKDAERRDLTINSMSLGF 136
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RIC PN H + L+AI+ N GL IS ERIW+E+++IL G+ S ++ M E+
Sbjct: 177 RFYGRICLLPNAHDPDTLTAIRDNAVGLTKISVERIWSEMSRILVGNHSPHLVSLMYELG 236
Query: 857 MFPHLGTDETFATLDFEGLFRSMPIPFTLLFSANFFRNLARITTLRIDVTTDGRHAEVQF 916
+ ++G + + ++ SM + L L + + G E +F
Sbjct: 237 VAANIGLPDDGNLSELTKVWESMHGHYQL-----------EPVCLLVSLLKSGEEVE-RF 284
Query: 917 TEDWKLDANRRDL 929
+ WKL R L
Sbjct: 285 SRQWKLSNLERKL 297
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L+G+ DID AT+ TPD M +F E +R + G HGT+ + ++E+
Sbjct: 39 AVRDLLLGRNAKDIDLATDCTPDGMIKLFEREGIR-YIPTGLNHGTITVHTDRSNDYEIT 97
Query: 435 PVK 437
++
Sbjct: 98 TLR 100
>gi|340518217|gb|EGR48459.1| sulfite oxidase-like protein [Trichoderma reesei QM6a]
Length = 511
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP + +S+I+ H WV + VYDITE++ HPGG +I++AAGGSIEP+W ++ +
Sbjct: 7 LPRFRMSEIRKHDAKSPHPWVTYGDKVYDITEWIAAHPGGPVILRAAGGSIEPYWNIFTI 66
Query: 80 HLQDEVFELLESYRIGNISQED--SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
H V+++L Y IG + Q D + A++ DP+ +PVR P L + KP NAE P
Sbjct: 67 HKNQYVYDILNQYLIGYVHQADLVNGKPAQETIEDPFADDPVRHPDLIKRTHKPCNAETP 126
Query: 138 PSMLVENFLTPSLL 151
L +F+TP+ L
Sbjct: 127 EPALSAHFITPNEL 140
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 10/120 (8%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAIC-LPVADAKLKLEN 308
+ LSD ES S WQ+ DYK F P+ VD+ +PAIQELPV SAI + + D K E+
Sbjct: 316 ITLSDEESPSQWQRKDYKCFGPNQT--KVDWESAPAIQELPVQSAITGVKLGDWKASDES 373
Query: 309 -------HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLW 361
++ + GYA+SGGG++++RVDV++D G+TW A+ ++ + W W W
Sbjct: 374 TSSDSPAKEVALNGYAYSGGGRSVIRVDVSLDDGKTWSQAHLLPDEAPKFDGKSWSWKRW 433
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D +YNTQPES A WN RG L+ A+HRV+V
Sbjct: 452 KATDEAYNTQPESHAATWNFRGNLATAWHRVQV 484
>gi|196005311|ref|XP_002112522.1| hypothetical protein TRIADDRAFT_25022 [Trichoplax adhaerens]
gi|190584563|gb|EDV24632.1| hypothetical protein TRIADDRAFT_25022 [Trichoplax adhaerens]
Length = 400
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 77/114 (67%), Gaps = 5/114 (4%)
Query: 633 RKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFA 692
R LT++ S +DGT++DYFNG EDL FVG+ RIQEDYLRILRYFRF+
Sbjct: 123 RDLTINAM----SLSIDGTLFDYFNGREDLINRRIIFVGNTRKRIQEDYLRILRYFRFYG 178
Query: 693 RICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
RI N ++H ++L I++ GL I+ ERIW E++KIL G+F+ + +L+++Y
Sbjct: 179 RIAANADSHDPDILQEIRHTAAGLEKIASERIWMEMSKILVGNFAPD-LLRLMY 231
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID TDGRHA+VQFT DW++DA RRDLT+N+M L +
Sbjct: 94 ITTLRIDAITDGRHAQVQFTNDWRIDAERRDLTINAMSLSI 134
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI N ++H ++L I+ GL I+ ERIW E++KIL G+F+ +++ M ++
Sbjct: 175 RFYGRIAANADSHDPDILQEIRHTAAGLEKIASERIWMEMSKILVGNFAPDLLRLMYDLG 234
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFS 888
+ H+ + +F+ ++ M P P LL S
Sbjct: 235 VASHINLPKDGNVEEFQAIWDRMRNYKPQPAVLLAS 270
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 376 IMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKP 435
+ D+L+ K DID AT+ATPDQM + + +++ + E G +HGT+ +N K FE+
Sbjct: 39 VRDVLLDKVAKDIDLATDATPDQMIEILKKNEIK-YVETGLQHGTITVIIN-KAIFEITT 96
Query: 436 VK--GLTWG-HAAV 446
++ +T G HA V
Sbjct: 97 LRIDAITDGRHAQV 110
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 728 LNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPT 787
L K + G + YQ+LL K T R++I++LM Y S+L+ D + W +P
Sbjct: 294 LMKFITGKRQNHYTILKQYQDLLFD---KETMSRDHIIQLMYYNGHSQLVDDINNWVIPK 350
Query: 788 FPMNGNIIRQF-------FARICNNPNNH---------KEEVLSAIKKN 820
FP+ GN ++ F R + H KEE+L I+ N
Sbjct: 351 FPIGGNDLKSLGHKPGPQFKRTLDMLKKHWMDTNYKTTKEELLMLIQSN 399
>gi|322699729|gb|EFY91488.1| putative Sulfite oxidase [Metarhizium acridum CQMa 102]
Length = 664
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP + +++++ H WV++ VYDIT++V HPGG++I++AAGGSI+P+W ++ +
Sbjct: 124 LPRFRITEVRKHGADSDHPWVIYGDKVYDITDWVPAHPGGQVILRAAGGSIDPYWNIFTI 183
Query: 80 HLQDEVFELLESYRIGNISQED--SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
H V+++L Y IG + Q D + A+D DP+ +P R P L + KP NAE P
Sbjct: 184 HKNQYVYDILSQYLIGYVDQADLVNGKPAQDQIEDPFENDPERHPSLITRTAKPRNAETP 243
Query: 138 PSMLVENFLTPSLL 151
L FLTP+ L
Sbjct: 244 AEALTAQFLTPNEL 257
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 77/151 (50%), Gaps = 37/151 (24%)
Query: 250 VILSDHESTSHWQQNDYKGFSPS---TDWDTVDFAKSPAIQELPVISAIC-LPVA----- 300
+ LSD ESTS WQ+ DYK F P+ DWD +PAIQELPV SAI L +
Sbjct: 433 ITLSDEESTSQWQRKDYKCFGPNQIKVDWDA-----APAIQELPVQSAITTLKLGKWLDS 487
Query: 301 -----------DAKLKLENH---QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF--- 343
D + +NH ++ + GYA+SGGG++I+RVDV++D G +W A
Sbjct: 488 KTEPNVLKNDQDQTVTSQNHPQQEISMSGYAFSGGGRSIIRVDVSLDGGGSWTQAYLLPD 547
Query: 344 --TGQDSQAPLTRH--WGWTLW--RATIPVD 368
T +P H W W W ++P++
Sbjct: 548 CVTKNGMPSPCQGHGAWSWKRWVFEGSVPLN 578
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 453 GARLVDVLKAAGISPDQSLDSADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNA 512
G R D + AA S Q D V V KA D +YNTQPES A WN RG L+ A
Sbjct: 585 GGRPDDPVAAAANSKSQDGDQKRCTTVLV----KATDDAYNTQPESHAATWNFRGNLATA 640
Query: 513 YHRVRV 518
+HRV+V
Sbjct: 641 WHRVQV 646
>gi|302889794|ref|XP_003043782.1| hypothetical protein NECHADRAFT_96028 [Nectria haematococca mpVI
77-13-4]
gi|256724700|gb|EEU38069.1| hypothetical protein NECHADRAFT_96028 [Nectria haematococca mpVI
77-13-4]
Length = 589
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYG 78
+LP Y +S+++ H + WV+ VYDITE++ HPGG +I++AAGGSI P+W ++
Sbjct: 84 SLPRYRISEVRKHDAHSDNPWVIHDDKVYDITEWIGAHPGGNVILRAAGGSINPYWDIFA 143
Query: 79 VHLQDEVFELLESYRIGNISQED---SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
+H V+++L Y IG + D K A ++I DP+ +P R P L + KP NAE
Sbjct: 144 IHKNQYVYDILNQYLIGYVDSADLVNGKPAQEEI-EDPFADDPSRHPDLITMTDKPRNAE 202
Query: 136 PPPSMLVENFLTPSLLSQV 154
PP + FLTP+ L V
Sbjct: 203 TPPDAMTTEFLTPNDLFYV 221
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 24/131 (18%)
Query: 250 VILSDHESTSHWQQNDYKGFSPS---TDWDTVDFAKSPAIQELPVISAICL--------P 298
+ LSD EST+ WQ+ DYK F P+ DWDT +PAIQELPV SAI P
Sbjct: 393 ITLSDEESTTQWQRRDYKCFGPNQTHVDWDT-----APAIQELPVQSAITTCKLGDWTRP 447
Query: 299 VADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF-----TGQDSQAPLT 353
D+ + + + + GYA+SGGG++I+RVDV++D G+TW A+ T + +P
Sbjct: 448 DKDSS-EAQTKKAALTGYAYSGGGRSIIRVDVSLDNGKTWSQASILPDCTTKDGAPSPCL 506
Query: 354 RH--WGWTLWR 362
H W W W+
Sbjct: 507 GHGSWAWRRWK 517
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVR 517
KA D SYNTQPES A WN+RG L+ A+HR++
Sbjct: 545 KATDESYNTQPESHAATWNIRGNLATAWHRIK 576
>gi|326435446|gb|EGD81016.1| CCA-adding enzyme [Salpingoeca sp. ATCC 50818]
Length = 455
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 90/144 (62%), Gaps = 7/144 (4%)
Query: 633 RKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFA 692
R LT++ D LDG ++DYF+G + L + FVGDP RIQED+LRILRYFRF
Sbjct: 180 RDLTINAMSMD----LDGHIFDYFDGRDHLAQEKIVFVGDPAQRIQEDFLRILRYFRFHG 235
Query: 693 RICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLF 752
++C + NNH+ + AI +N+ GL ++SGERIW E++KIL + + E++ M Q +
Sbjct: 236 KVCRH-NNHEPAQIQAITDNVQGLESVSGERIWMEMSKILKTARAPELVECM--QACGVL 292
Query: 753 SKLKATTMREYIVELMKYKEKSEL 776
++ + ++ ++ +++ + EL
Sbjct: 293 PHIQLANVEQHHLQRLRHVHRYEL 316
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F ++C + NNH+ + AI N+ GL ++SGERIW E++KIL + + E++ M
Sbjct: 232 RFHGKVCRH-NNHEPAQIQAITDNVQGLESVSGERIWMEMSKILKTARAPELVECMQACG 290
Query: 857 MFPHL 861
+ PH+
Sbjct: 291 VLPHI 295
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR+D V FT+DWKLDA RRDLT+N+M + +
Sbjct: 151 VTTLRLDHEGAEGTGPVCFTDDWKLDAERRDLTINAMSMDL 191
>gi|340384941|ref|XP_003390969.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like,
partial [Amphimedon queenslandica]
Length = 382
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S DG +YDYF+G + L + FVGD VSRIQEDYLRILRYFRF+ RIC PN H +
Sbjct: 115 SLGFDGKLYDYFDGQKHLAERKLLFVGDAVSRIQEDYLRILRYFRFYGRICLLPNAHDPD 174
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
+L AI++N GL IS ERIW+E+++IL G+ S ++ ++Y+
Sbjct: 175 MLIAIRDNAVGLTKISVERIWSEMSRILVGNHSPHLV-SLMYE 216
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 32/41 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID TDGRHA VQFT DW DA RRDLT+NSM LG
Sbjct: 78 ITTLRIDHVTDGRHALVQFTSDWVKDAERRDLTINSMSLGF 118
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RIC PN H ++L AI+ N GL IS ERIW+E+++IL G+ S ++ M E+
Sbjct: 159 RFYGRICLLPNAHDPDMLIAIRDNAVGLTKISVERIWSEMSRILVGNHSPHLVSLMYELG 218
Query: 857 MFPHLGTDETFATLDFEGLFRSMPIPFTLLFSANFFRNLARITTLRIDVTTDGRHAEVQF 916
+ ++G + + ++ SM + L L + + G E +F
Sbjct: 219 VAANIGLPDDGNLNELTKVWESMHRHYQL-----------EPVCLLVSLLKSGEEVE-RF 266
Query: 917 TEDWKLDANRRDLTV 931
+ WKL R L +
Sbjct: 267 SRQWKLSNLERKLGI 281
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L+G+ DID AT+ TPD M +F E +R + G HGT+ + ++E+
Sbjct: 21 AVRDLLLGRNAKDIDLATDCTPDGMIKLFEREGIR-YIPTGLNHGTITVHTDQSNDYEIT 79
Query: 435 PVK 437
++
Sbjct: 80 TLR 82
>gi|322706054|gb|EFY97636.1| hypothetical protein MAA_06861 [Metarhizium anisopliae ARSEF 23]
Length = 668
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP + +++++ H WV++ VYDIT+++ HPGG++I++AAGGSI+P+W ++ +
Sbjct: 129 LPRFRIAEVRKHGADSDHPWVIYGDKVYDITDWIPAHPGGQVILRAAGGSIDPYWNIFTI 188
Query: 80 HLQDEVFELLESYRIGNISQED--SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
H V+++L Y IG + Q D + A+D DP+ +P R P L + KP NAE P
Sbjct: 189 HKNQYVYDILSQYLIGYVDQADLVNGKPAQDQIEDPFENDPERHPSLITRTAKPRNAETP 248
Query: 138 PSMLVENFLTPSLL 151
L FLTP+ L
Sbjct: 249 SEALSAQFLTPNEL 262
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 44/207 (21%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAIC-LPVA---DAKLK 305
+ LSD ESTS WQ+ DYK F P+ VD+ +PAIQELPV SAI L + D+K++
Sbjct: 438 ITLSDEESTSQWQRKDYKCFGPNQT--KVDWDAAPAIQELPVQSAITTLKLGKWLDSKIE 495
Query: 306 ---LENHQ-------------MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF-----T 344
L+N Q + + GYA+SGGG++I+RVDV++D G +W A +
Sbjct: 496 PNVLKNDQDQAVTSQNPPQQEISMSGYAFSGGGRSIIRVDVSLDGGGSWTQAYLLPDCVS 555
Query: 345 GQDSQAPLTRH--WGWTLW--RATIPVDPKTKEVSIMDMLMGKKPHD-IDFATNA-TPD- 397
+P H W W W ++P+D G +P D + A N+ TPD
Sbjct: 556 KNGMPSPCQGHGAWAWKRWVFEGSVPLD-------TFKEKHGGRPDDPVTAAANSKTPDS 608
Query: 398 ---QMKAMFAEEKVRTFNEKGEKHGTV 421
+ + + +N + E H
Sbjct: 609 GQKRCTTVLVKATDDAYNTQPESHAAT 635
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 453 GARLVDVLKAAGISPDQSLDSADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNA 512
G R D + AA S ++ DS + V + KA D +YNTQPES A WN RG L+ A
Sbjct: 590 GGRPDDPVTAAANS--KTPDSGQKRCTTVLV--KATDDAYNTQPESHAATWNFRGNLATA 645
Query: 513 YHRVRV 518
+HRV+V
Sbjct: 646 WHRVQV 651
>gi|308496537|ref|XP_003110456.1| hypothetical protein CRE_05412 [Caenorhabditis remanei]
gi|308243797|gb|EFO87749.1| hypothetical protein CRE_05412 [Caenorhabditis remanei]
Length = 479
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 114/251 (45%), Gaps = 74/251 (29%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV----------------TAKVLS 615
+K+D+ +F + FTP+L +L +F K Y++RIAG G V TA
Sbjct: 38 LKIDNEDFRALFTPQLLKLRDLFAKRNYEIRIAG-GAVRDLLMNIHPADVDFASTATPTQ 96
Query: 616 YRNRREKED----------------RIGENQPFRKLTLSV------------------QD 641
+ E+E+ RI E + F TL + QD
Sbjct: 97 MKEMFEEENIRMLHKRGEEHGTITCRIDEAENFEITTLRIDVVCDGRRAEVKYTTDWQQD 156
Query: 642 KDR------SFRLD--GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRIL-------- 685
+R S LD G V DYF G D++ AFVGD RIQEDYLRIL
Sbjct: 157 ANRRDLTINSLFLDLHGNVVDYFGGIADIESRRVAFVGDARQRIQEDYLRILRYESQQFL 216
Query: 686 ------RYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKE 739
RYFRFF RI N P H+ + + AI +N DG+ IS ERIWTEL KI+ G +
Sbjct: 217 IGSNSFRYFRFFGRISNTP-EHEADTIQAIIDNKDGMAGISAERIWTELKKIVVGRMADI 275
Query: 740 MMLKMLYQNLL 750
++ M+ Q L
Sbjct: 276 VVKSMIEQCQL 286
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LM P D+DFA+ ATP QMK MF EE +R +++GE+HGT+ R+++ ENFE+
Sbjct: 73 AVRDLLMNIHPADVDFASTATPTQMKEMFEEENIRMLHKRGEEHGTITCRIDEAENFEIT 132
Query: 435 PVK 437
++
Sbjct: 133 TLR 135
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV DGR AEV++T DW+ DANRRDLT+NS+FL +
Sbjct: 131 ITTLRIDVVCDGRRAEVKYTTDWQQDANRRDLTINSLFLDL 171
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 782 KWRLPTFPMNGNIIR--QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKI 839
++ F + N R +FF RI N P H+ + + AI N DG+ IS ERIWTEL KI
Sbjct: 209 RYESQQFLIGSNSFRYFRFFGRISNTPE-HEADTIQAIIDNKDGMAGISAERIWTELKKI 267
Query: 840 LGGSFSKEMMLKMLE-INMFPHLGTDETFATLDFEGLFRSMP 880
+ G + ++ M+E + +LG E F+ +F P
Sbjct: 268 VVGRMADIVVKSMIEQCQLQKYLGLPENCNLNRFQKVFTRFP 309
>gi|452838407|gb|EME40348.1| hypothetical protein DOTSEDRAFT_74974 [Dothistroma septosporum
NZE10]
Length = 624
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQ 82
+ L DI H + S W++ VYDITEFV HPGG++I++A G SI+PFW ++ +H +
Sbjct: 137 HRLVDIAKHDEHSDSKWIIHGTAVYDITEFVDTHPGGKVILRACGKSIDPFWKLFSIHNK 196
Query: 83 DEVFELLESYRIGNISQED---------SKLAAK-DIASDPYVMEPVRSPLLKATSLKPY 132
EV ++L+ + IG + + D S L + +I DP+ +P R P L + KP+
Sbjct: 197 PEVQKILDDFYIGEVDERDLDTDGHINWSVLGGECNICEDPFKDDPERDPALIVRTPKPF 256
Query: 133 NAEPPPSMLVENFLTP 148
NAE PP +L +FLTP
Sbjct: 257 NAETPPQLLT-DFLTP 271
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 68/123 (55%), Gaps = 10/123 (8%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP---STDWDTVDFAKSPAIQELPVISAICLPVADAKLK 305
K+ +S ES S+W DYK F P + D D+ ++ +IQELPV SAI K
Sbjct: 451 KIRISCDESQSNWHSRDYKCFGPNVRAADLKQEDWDEAQSIQELPVQSAIT-----NMSK 505
Query: 306 LENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATI 365
++ + + G+A+SGGG+ IVRVDV+ D G+TW A Q A TR W WTLW
Sbjct: 506 RKDASVALDGFAYSGGGRRIVRVDVSPDGGKTWKQACL--QKDNAKGTRRWAWTLWNMEW 563
Query: 366 PVD 368
P D
Sbjct: 564 PED 566
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 432 EVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVEIWSKAVDSS 491
+V P G TW A + G R P+ L +V+ V KAVD +
Sbjct: 529 DVSPDGGKTWKQACLQKDNAKGTRRWAWTLWNMEWPEDQLPDGEVEFV-----VKAVDEA 583
Query: 492 YNTQPESFANIWNLRGVLSNAYHRVRVEIWSKAVDSSYNTQ 532
+N QP +F +IWN RG+L NA+HRV + + +++ N Q
Sbjct: 584 HNCQPATFDSIWNFRGLLGNAWHRVSYTL--REAETAKNVQ 622
>gi|449662365|ref|XP_002154568.2| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like
[Hydra magnipapillata]
Length = 436
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 18/159 (11%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S ++ +YDYFNG DLK+GV FVG+ +RI+EDYLRILRYFRF+ RI N ++H E+
Sbjct: 154 SMDVNAVLYDYFNGENDLKQGVVRFVGNVENRIREDYLRILRYFRFYGRIAPNIHSHDEK 213
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM--------------LYQNLL 750
L+ IK +GL N++ ERIW E++KIL G + ++L M L NL
Sbjct: 214 TLNTIKTLSEGLKNLAVERIWLEVSKILTGPLAPHLLLLMQQLNVTESIGFPIVLEDNLK 273
Query: 751 LFSKLKATTMR---EYIVELMKYKEKSELIKDF-HKWRL 785
LF + T + L+ E ++++DF KW+L
Sbjct: 274 LFETVWTQTRNVDVSPVTLLVTLLENEKIMEDFGSKWKL 312
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 897 RITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
++TTLR D+ TDGRHA+V+FT DWKLDA RRDLT NSM
Sbjct: 116 QVTTLRYDIKTDGRHAKVEFTNDWKLDAERRDLTFNSM 153
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L+G DID +T ATP QM +F+E K+R F E G HGT+ A N ++ F+V
Sbjct: 61 AVRDVLLGNPAKDIDLSTTATPQQMVEVFSENKIR-FIETGLAHGTLTAHYNGRD-FQVT 118
Query: 435 PVK 437
++
Sbjct: 119 TLR 121
>gi|313244235|emb|CBY15063.1| unnamed protein product [Oikopleura dioica]
Length = 246
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DG V DYFNG EDLK FVG P RIQED+LRILRYFRF++RI + + H +E L
Sbjct: 134 FDGEVIDYFNGQEDLKARKIQFVGHPEERIQEDFLRILRYFRFYSRISDKEDAHCKEHLL 193
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
AIK N GL ISGERIW+E+ KIL F + ++ LY+
Sbjct: 194 AIKENAAGLAGISGERIWSEIVKILNQPFDR-FFVRYLYE 232
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 36/39 (92%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLRID TDGRHAEVQFT DW++DANRRDLT+NSMFL
Sbjct: 94 ITTLRIDKVTDGRHAEVQFTTDWRIDANRRDLTINSMFL 132
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 359 TLWRATIPVDPKTKEVSIM-----DMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNE 413
LW+ D KE+ I D+L+GK P DID AT ATPD+M M +EK+ T N
Sbjct: 16 ALWKLKRIFDDHKKELRIAGGAPRDLLLGKIPSDIDLATTATPDEMIEMLKKEKIDTINA 75
Query: 414 KGEKHGTVCARMNDKENFEVKPVK 437
G KHGTV A + D+ N+E+ ++
Sbjct: 76 NGIKHGTVTAHI-DEVNYEITTLR 98
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEI 855
+F++RI + + H +E L AIK+N GL ISGERIW+E+ KIL F + + + E+
Sbjct: 175 RFYSRISDKEDAHCKEHLLAIKENAAGLAGISGERIWSEIVKILNQPFDRFFVRYLYEL 233
>gi|402581093|gb|EJW75042.1| hypothetical protein WUBG_14048, partial [Wuchereria bancrofti]
Length = 180
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%)
Query: 45 GVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNISQEDSKL 104
GVYDIT F+Q HPGG+ I+ AAGG I+P+W +Y HL E E+LE RIGN+ + D +
Sbjct: 1 GVYDITNFIQSHPGGDKILLAAGGPIDPYWNIYQQHLTQETLEILEELRIGNLDENDIII 60
Query: 105 AAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSLLSQV 154
+ +D Y +P+R P L S KP+NAE P ++++NF TP+ L V
Sbjct: 61 IDQKNENDSYRNDPIRHPALIIKSEKPFNAETPVELIMDNFYTPNDLFYV 110
>gi|156342909|ref|XP_001620971.1| hypothetical protein NEMVEDRAFT_v1g222506 [Nematostella vectensis]
gi|156206494|gb|EDO28871.1| predicted protein [Nematostella vectensis]
Length = 481
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGE-IIMKAAGGSIEPFWAMYGVHL 81
+SLS++ H D + +W + GVYD+T+F++ HPGG+ +IM AAG ++P+W ++ H
Sbjct: 34 FSLSEVAKHTDARHGVWTTYEDGVYDLTDFIEQHPGGKKMIMLAAGSRLDPYWNIHDFHK 93
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
+D++ ++L +RIG++ +E K + DPY +P R P KP+ AEPP +L
Sbjct: 94 RDDIVKILSEFRIGSLRKEKIKASTGLNLDDPYSRDPKRHPAYTIYCNKPFLAEPPLGLL 153
Query: 142 VENFLTPS 149
+ +TP+
Sbjct: 154 GHSLITPT 161
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 66/156 (42%), Gaps = 32/156 (20%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G+V LS +S S WQQ YKG P + TVD + I ELPV S IC P L E
Sbjct: 336 GRVSLSKQKSQSMWQQTAYKGVPPCANQKTVDLQLAEDIHELPVTSVICHPEEGETLLRE 395
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
++ + GYAWSGGG+ I P + W W+LW T P+
Sbjct: 396 EKEVTISGYAWSGGGRGI-------------------------PYGKAWAWSLWELTAPL 430
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ I+ +D + N PD + ++
Sbjct: 431 PAHGDRMEII-------CKAVDSSFNVQPDTVAPIY 459
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEIWSK 523
+EI KAVDSS+N QP++ A I+N RG L NA+HRV V + K
Sbjct: 437 MEIICKAVDSSFNVQPDTVAPIYNYRGYLCNAWHRVNVTLGEK 479
>gi|412992757|emb|CCO18737.1| predicted protein [Bathycoccus prasinos]
Length = 580
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ D+ H ++ +W +++ VYD+T+F+ HPGG ++++ AAG IEPFW +Y H+
Sbjct: 89 YTRLDVAEHDSIEKRVWCSYKENVYDVTDFLDNHPGGRDLLLLAAGKDIEPFWRLYQAHV 148
Query: 82 QDEV-FELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSM 140
+V E+L++ +IG + E D +DPY +P R P LK S KP N EPP S+
Sbjct: 149 NSDVAMEMLKTLKIGELDLEKEPKVDVD-ETDPYKNDPERHPALKCHSAKPANMEPPLSL 207
Query: 141 LVENFLTPSLLSQV--GSSTITLDQAIVSKQLSSFKHSDEKLKLVKVMA 187
L +LTPS L V S +D A + S + S + L L++ A
Sbjct: 208 LRREYLTPSSLWFVRNHSPVPIIDAATHEITIVSGEQSQDNLNLLRTKA 256
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 42/195 (21%)
Query: 239 LRIPFCSHTG--------KVILSDHESTSHWQQN-DYKGFSPS-TDWDTVDFAKSPAIQE 288
LR+ H G K+ L E+ W + YKGF P + + ++ P +QE
Sbjct: 379 LRVIVPGHVGVRNVKWLSKIKLCSEEADGPWNRGIAYKGFGPGYSSVEGLNIDSVPTMQE 438
Query: 289 LPVISA------ICLPVA-----DAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRT 337
+P+ S I L +A D K Q +G+AWSGGG+AI+RVDV+ ++G +
Sbjct: 439 MPIQSVVAEAENISLSLATTSKNDDGEKRTVVQTSAKGFAWSGGGRAIIRVDVSANKGLS 498
Query: 338 WHVANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGK-KPHD--------I 388
W A + + PL++ W WT W E+ +++ K KP D +
Sbjct: 499 WQTATLK-EGADQPLSKAWAWTFW-----------EIDDLEIDASKLKPGDEIKVLVKAV 546
Query: 389 DFATNATPDQMKAMF 403
D + NA P+ A++
Sbjct: 547 DASYNAQPEGAAAIW 561
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+++ KAVD+SYN QPE A IWNLRG+ +N++H V++
Sbjct: 539 IKVLVKAVDASYNAQPEGAAAIWNLRGLNNNSWHAFTVKV 578
>gi|195146334|ref|XP_002014141.1| GL23016 [Drosophila persimilis]
gi|194103084|gb|EDW25127.1| GL23016 [Drosophila persimilis]
Length = 351
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 78/149 (52%), Gaps = 18/149 (12%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGTVYDYF G++DL++ FVGD RI EDYLRILRYFRF+ RI + +H + L
Sbjct: 164 FDGTVYDYFYGYDDLQQRRVVFVGDADIRINEDYLRILRYFRFYGRIAKDAESHDPQHL- 222
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVEL 767
G H ++W G + E YQ L L+ R+Y+ +L
Sbjct: 223 -------GRHQEKTLKVWQ------GSAVDSEYTTLRDYQKLC----LQPYAKRDYVEQL 265
Query: 768 MKYKEKSELIKDFHKWRLPTFPMNGNIIR 796
+KY K EL W P+FP+NGNI++
Sbjct: 266 LKYTRKVELYNQLKAWSTPSFPLNGNILK 294
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D++MG KP DIDFAT ATPDQMK MF +E VR N KGEKHGT+ R+N KENFEV
Sbjct: 66 AVRDIIMGIKPKDIDFATTATPDQMKDMFTKENVRMINSKGEKHGTITPRINGKENFEVT 125
Query: 435 PVK 437
++
Sbjct: 126 TLR 128
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV T+GRHA+V FT DW+LDANRRDLT+NSMFLG
Sbjct: 124 VTTLRIDVRTNGRHADVVFTTDWQLDANRRDLTINSMFLGF 164
>gi|358390677|gb|EHK40082.1| hypothetical protein TRIATDRAFT_313009 [Trichoderma atroviride IMI
206040]
Length = 657
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP + +S+I+ H WV VYDIT+++ HPGG +I++AAGG+IE +W ++ +
Sbjct: 114 LPRFRMSEIRKHDGKSERPWVTHGDKVYDITDWISAHPGGPVILRAAGGAIESYWNIFTI 173
Query: 80 HLQDEVFELLESYRIGNISQED--SKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPP 137
H V+++L Y IG I Q D ++ DP+ +P+R P L +LKP NAE P
Sbjct: 174 HKNQYVYDILNQYLIGYIDQADLVDGKPPQEAIEDPFADDPIRHPDLITRTLKPRNAETP 233
Query: 138 PSMLVENFLTPSLL 151
L F+TP+ L
Sbjct: 234 EQALSAQFITPTEL 247
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 12/123 (9%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAIC-LPVADAKLKLEN 308
+ LSD ES S WQ+ DYK F P+ VD+ +PAIQELPV SAI + + D L ++
Sbjct: 423 ITLSDEESPSQWQRKDYKCFGPNQT--KVDWEAAPAIQELPVQSAITGVKLGDWTLSGQS 480
Query: 309 ---------HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
++ + GYA+SGGG+A++RVDV++D G+TW AN + + W W
Sbjct: 481 ASSNSARPSKEVTLNGYAYSGGGRAVIRVDVSLDDGKTWSQANLLPDQAPKVDGKAWSWK 540
Query: 360 LWR 362
W+
Sbjct: 541 QWK 543
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D YNTQPES A WN RG L+ A+HRV+V
Sbjct: 600 KATDEVYNTQPESHAATWNFRGNLATAWHRVQV 632
>gi|242010004|ref|XP_002425767.1| tRNA-nucleotidyltransferase 1, putative [Pediculus humanus
corporis]
gi|212509693|gb|EEB13029.1| tRNA-nucleotidyltransferase 1, putative [Pediculus humanus
corporis]
Length = 469
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 73/117 (62%), Gaps = 13/117 (11%)
Query: 633 RKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFA 692
R LT++ D +GT+YDY FVG+ RIQEDYLRILRYFRF+
Sbjct: 181 RDLTINAMYLD----FNGTLYDYL---------TSTFVGEASLRIQEDYLRILRYFRFYG 227
Query: 693 RICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL 749
+I P+NH+EE+L +IK N GL ISGERIWTE++KIL G F E++ K+ N+
Sbjct: 228 KIAKEPDNHEEEILQSIKENAKGLVTISGERIWTEISKILMGKFVYEILSKIQMLNV 284
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L+GKKP D+DFAT ATPD+MK MF KVR N GE+HGT+ R+N+K N+E+
Sbjct: 95 AVRDLLLGKKPEDLDFATTATPDEMKKMFESNKVRMINMNGERHGTITVRLNEK-NYEIT 153
Query: 435 PVK--GLTWG-HAAV 446
++ +T G HA V
Sbjct: 154 TLRIDTITDGRHAEV 168
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 35/39 (89%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLRID TDGRHAEV+FT++W DANRRDLT+N+M+L
Sbjct: 152 ITTLRIDTITDGRHAEVEFTKNWFCDANRRDLTINAMYL 190
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 48/66 (72%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ +I P+NH+EE+L +IK+N GL ISGERIWTE++KIL G F E++ K+ +N
Sbjct: 224 RFYGKIAKEPDNHEEEILQSIKENAKGLVTISGERIWTEISKILMGKFVYEILSKIQMLN 283
Query: 857 MFPHLG 862
+ ++G
Sbjct: 284 VGSYIG 289
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 763 YIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIR 796
+ +EL+KY EL K+ WR+P FP+NGN+++
Sbjct: 381 FSLELLKYNGNVELHKELENWRIPKFPLNGNMLK 414
>gi|156364997|ref|XP_001626629.1| predicted protein [Nematostella vectensis]
gi|156213513|gb|EDO34529.1| predicted protein [Nematostella vectensis]
Length = 565
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGE-IIMKAAGGSIEPFWAMYGVHL 81
+SLS++ H D + +W + GVYD+T+F++ HPGG+ +IM AAG ++P+W ++ H
Sbjct: 49 FSLSEVARHTDARHGVWTTYEDGVYDLTDFIEQHPGGKKMIMLAAGSRLDPYWNIHDFHK 108
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
+D++ ++L +RIG++ +E+ K + DPY +P R P L KP+ AEP +L
Sbjct: 109 RDDIVKILSEFRIGSLRKEEIKASTLLNLDDPYFRDPKRHPALTVYCNKPFLAEPLLGLL 168
Query: 142 VENFLTPS 149
+ +TP+
Sbjct: 169 GHSLITPT 176
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 267 KGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIV 326
+G P + TVD + I ELPV S IC P + E ++ + GYAWSGGG+ IV
Sbjct: 416 QGVPPCANQKTVDLQVAEDIHELPVTSVICHPEEGKTILREEEEVTISGYAWSGGGRGIV 475
Query: 327 RVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPH 386
RVDV++D G+TW+ A+ G + P + W W+LW T P+ + I+
Sbjct: 476 RVDVSLDGGKTWNTASLDG--VKQPYGKAWAWSLWELTAPLPAHGDRMEIIC-------K 526
Query: 387 DIDFATNATPDQMKAMF 403
+D + N PD + ++
Sbjct: 527 AVDSSFNVQPDTVAPIY 543
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEIWSK 523
+EI KAVDSS+N QP++ A I+N RG L NA+HRV V + K
Sbjct: 521 MEIICKAVDSSFNVQPDTVAPIYNYRGYLCNAWHRVNVTLGEK 563
>gi|402584827|gb|EJW78768.1| PolyA polymerase [Wuchereria bancrofti]
Length = 409
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 64/98 (65%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
LDGTV DYF G +DL+K FVGD RIQEDYLRILRYFRF+ R+ + H + L
Sbjct: 110 LDGTVIDYFGGIKDLEKRQIVFVGDANQRIQEDYLRILRYFRFYGRLAIDGEMHDKATLD 169
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
AI +N +GL +ISGERIW EL KI G ++ ML
Sbjct: 170 AIISNRNGLKDISGERIWMELKKICVGRLGGAVLTTML 207
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 49/63 (77%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG KP DIDFATNATP++MK +F E +R N+ GE+HGT+ R++DKENFE+
Sbjct: 5 AVRDLLMGIKPSDIDFATNATPEKMKELFLREGIRMLNKNGEEHGTITCRIDDKENFEIT 64
Query: 435 PVK 437
++
Sbjct: 65 TLR 67
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 901 LRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
RID DGR A+++FT +W+LDANRRDLTVNS+FL +
Sbjct: 73 FRIDTVCDGRRAKIEFTTNWQLDANRRDLTVNSLFLDL 110
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLE-I 855
+F+ R+ + H + L AI N +GL +ISGERIW EL KI G ++ ML+
Sbjct: 151 RFYGRLAIDGEMHDKATLDAIISNRNGLKDISGERIWMELKKICVGRLGGAVLTTMLKRC 210
Query: 856 NMFPHLGTDETFATLDFEGLF-RSMPIPFTLLFSANFFRNLARI 898
N+ LG E T+ F L R P + ++ F + +I
Sbjct: 211 NLASLLGLPENADTVYFCKLHKRYYPKIEAMTLLSSLFTEMGQI 254
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 744 MLYQNLLL-------FSKLKATTMREYIVELMKYKE-KSELIKDFHKWRLPTFPMNG 792
+ ++N+LL F++ K T RE ++EL KY ELI + W +PTFP+ G
Sbjct: 289 LFFKNILLVEERLHKFTRKKIQTSREKVIELAKYAMVDDELINELSIWEMPTFPIGG 345
>gi|281212516|gb|EFA86676.1| Putative sulfite oxidase [Polysphondylium pallidum PN500]
Length = 626
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 11/157 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD--FAKSPAIQELPVISAICLPVADAKLKL 306
KV +S+ ESTS +Q+ DYK F DW ++ + K+P++QEL + SAIC+P +++L L
Sbjct: 455 KVTVSNEESTSFFQRRDYKIFHSGIDWHNIEKFWDKNPSLQELSIQSAICVPAPNSRLYL 514
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+ GYA SGGG+ I RVD+++D G +W A G+D + P+ ++W WTL++ TI
Sbjct: 515 P---FTIFGYATSGGGRKIERVDISLDGGESWDYAELMGED-KGPVNKYWAWTLFKYTIK 570
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
K +I M D A+N P ++K ++
Sbjct: 571 SIKADKATNIRLMCRA-----WDSASNTQPKEVKDIW 602
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
++ + +A DS+ NTQP+ +IWNLRGV++N++H V V +
Sbjct: 579 NIRLMCRAWDSASNTQPKEVKDIWNLRGVMNNSWHYVDVTV 619
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISP 467
CA + K VKG+ WG A++ N TW+G RL DVL AA I P
Sbjct: 332 CAGNRRTMMSDYKKVKGVGWGIASLSNGTWSGCRLRDVLLAAKILP 377
>gi|330790427|ref|XP_003283298.1| hypothetical protein DICPUDRAFT_52167 [Dictyostelium purpureum]
gi|325086723|gb|EGC40108.1| hypothetical protein DICPUDRAFT_52167 [Dictyostelium purpureum]
Length = 395
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 22/164 (13%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD--FAKSPAIQELPVISAICLPVADAKLKL 306
K+ +S HES S +Q+ DYK F DW+ V+ + K+P++QEL + SAIC+P ++ L L
Sbjct: 219 KITISPHESESFFQRRDYKIFHNGVDWNNVEKYWDKTPSLQELSIQSAICVPAPNSALYL 278
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+ GYA SGGG+ I RVDV++D G TW A G+D + T++WGWTL+R TI
Sbjct: 279 P---FTITGYATSGGGRKIERVDVSLDGGETWDYAELLGED-KGVCTKYWGWTLFRYTIT 334
Query: 367 VDPKTKEVSIMDMLMGKKPHDI-------DFATNATPDQMKAMF 403
P+ L GK I D ++N P +K ++
Sbjct: 335 KLPQ---------LEGKDSTKIKLVCRAWDLSSNTQPKDVKDIW 369
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+++ +A D S NTQP+ +IWNLRGV++N +H V V I
Sbjct: 347 IKLVCRAWDLSSNTQPKDVKDIWNLRGVMNNCWHTVDVTI 386
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS 470
CA E K VKG+ WG A++ NATW G RL DVL A I +S
Sbjct: 96 CAGNRRTAMSEYKKVKGVGWGIASLSNATWGGCRLRDVLLHAKIFSKES 144
>gi|391334822|ref|XP_003741799.1| PREDICTED: probable sulfite oxidase, mitochondrial-like
[Metaseiulus occidentalis]
Length = 205
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQ 82
YS I H K IWV +R+GVYDIT+F++ HPGG+ I+ AAGG ++PFW ++ H
Sbjct: 81 YSAETISKHITKKDRIWVSWREGVYDITDFIEQHPGGKTILMAAGGPLDPFWDVFAQHHT 140
Query: 83 DEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAE 135
E+ ++LE YRIGN+ +E+ + YV +P++ PLL A +L PY A+
Sbjct: 141 PEIMDVLEEYRIGNLMEEEGPPKKQ----KEYVFDPMKYPLLIAAALGPYLAK 189
>gi|358254602|dbj|GAA55924.1| sulfite oxidase [Clonorchis sinensis]
Length = 603
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
Query: 25 LSDIQNHKDLK-SSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQD 83
LS+++ HK + IWV+F+ VYD+T FV+ HPGG+ I+ AAG + P+W +Y H +
Sbjct: 157 LSEVKKHKSVADGGIWVIFQGKVYDVTNFVEKHPGGDKILLAAGSDVAPYWRLYAFHHEK 216
Query: 84 EVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVE 143
V ++L Y IG++ + ++ L ++ S PY +P R P L S +P NAE P ++ +
Sbjct: 217 HVIDILREYYIGDLPESEANLTEQEERSGPYANDPERHPALVTISKEPRNAETPAVLIPD 276
Query: 144 NFLTPSLL 151
+TP+ L
Sbjct: 277 YPITPNEL 284
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
K+ LS+ E+ S++QQ+DYK S + + D+ PAI + PV SAIC P L+ E
Sbjct: 487 KITLSNEENQSYYQQSDYKLGYVSGESENPDYKHIPAIFDYPVQSAICTPQDGQSLENEG 546
Query: 309 HQMEVQGY 316
+ V+GY
Sbjct: 547 -SITVRGY 553
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 436 VKGLTWGHAAVGNATWTGARLVDVL 460
++GL W HAA+ A WTG RLVDVL
Sbjct: 367 IRGLGWQHAALSTAEWTGVRLVDVL 391
>gi|170594816|ref|XP_001902140.1| polyA polymerase family protein [Brugia malayi]
gi|158590356|gb|EDP29010.1| polyA polymerase family protein [Brugia malayi]
Length = 480
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 64/98 (65%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
LDGTV DYF G +DL++ FVGD RIQEDYLRILRYFRF+ R+ + H + L
Sbjct: 181 LDGTVIDYFGGIKDLEERKIVFVGDANQRIQEDYLRILRYFRFYGRLAIDGEMHDKATLD 240
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
AI +N +GL +ISGERIW EL KI G ++ ML
Sbjct: 241 AIISNRNGLKDISGERIWMELKKICVGRLGGAVLTTML 278
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG KP DIDFATNATP++MK +F E +R N+ GE+HGT+ R++DKENFE+
Sbjct: 71 AVRDLLMGIKPCDIDFATNATPEKMKELFLREGIRMLNKNGEEHGTITCRIDDKENFEIT 130
Query: 435 PVKGLTWGH 443
++ + + +
Sbjct: 131 TLRHVNFCY 139
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 31/37 (83%)
Query: 902 RIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+ID DGR A+++FT +W+LDANRRDLTVNS+FL +
Sbjct: 145 QIDTVCDGRRAKIEFTTNWQLDANRRDLTVNSLFLDL 181
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLE-I 855
+F+ R+ + H + L AI N +GL +ISGERIW EL KI G ++ ML+
Sbjct: 222 RFYGRLAIDGEMHDKATLDAIISNRNGLKDISGERIWMELKKICVGRLGGAVLTTMLKRC 281
Query: 856 NMFPHLGTDETFATLDFEGLF-RSMPIPFTLLFSANFFRNLARI 898
N+ LG E T+ F L R P + ++ F + +I
Sbjct: 282 NLASLLGLPEKADTVYFCKLHKRYYPKIEAMTLLSSLFTEMGQI 325
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 27/33 (81%)
Query: 573 KLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG 605
K+D+P+F + FTPEL +L +F+K+ +QLR+AG
Sbjct: 37 KIDTPQFKALFTPELIKLNDLFKKNDFQLRMAG 69
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 744 MLYQNLLL-------FSKLKATTMREYIVELMKYKE-KSELIKDFHKWRLPTFPMNG 792
+ ++N+LL F++ K T RE ++EL KY ELI + W +PTFP+ G
Sbjct: 360 LFFKNILLIEERLHKFTRKKIQTSREKVIELAKYAMVNDELINELSIWEMPTFPIGG 416
>gi|219115523|ref|XP_002178557.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410292|gb|EEC50222.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 600
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 7/155 (4%)
Query: 2 EDGVKALSKLRAGEPISTLPWYSLSDI-QNHKDLKSSIWVVFRQGVYDITEFVQMHPGG- 59
E G + + +A I+++P YSL +I + + + + IW+ + VYD+T+F+ HPGG
Sbjct: 98 EVGKEDFEEFQASHDINSMPVYSLEEIAEKNGENGNPIWMSYGGVVYDVTDFIPNHPGGS 157
Query: 60 EIIMKAAGGSIEPFWAMYGVHLQDEV-FELLESYRIGNISQEDSKLAAKDIAS----DPY 114
E I+ AAG +IEPFW +Y H ++ L+E IG +S+ED + + +A+ DPY
Sbjct: 158 EKILTAAGSAIEPFWYLYRQHFASDLPMRLMEHMAIGRLSEEDQERIEEQMATLEETDPY 217
Query: 115 VMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPS 149
EP R L S P NAE P L +NFLTP+
Sbjct: 218 AKEPYRHRALLVHSDTPMNAECPTRFLTQNFLTPA 252
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 249 KVILSDHESTSHWQQN-DYKGFSPS-TDWDTVDFAKSPAIQELPVISAICL---PVADAK 303
K+ L+ E+ WQ+ +YK P+ T+ VD K P++ E+ + S I P
Sbjct: 428 KIELAKTEAEGPWQRGLNYKTLPPNMTNAKNVDLNKMPSMTEVSLFSGITQVEKPEMKEG 487
Query: 304 LKLENH-QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWR 362
+K + ++ G+AW+GGG+ IVRVDVT D G +W A + S+ R W WT W
Sbjct: 488 MKAGDKITVKATGWAWAGGGRNIVRVDVTGDNGASWATA-ILKEGSEQRFGRAWAWTFWE 546
Query: 363 ATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPD 397
+P + D + +D A NA P+
Sbjct: 547 CDVPA------IVQEDGNVHLASKAVDLAFNAQPE 575
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 30/41 (73%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+V + SKAVD ++N QPE + WN+RG+ +N+++R ++ I
Sbjct: 558 NVHLASKAVDLAFNAQPEDANHTWNVRGLGNNSWYRTKIRI 598
>gi|313239125|emb|CBY14101.1| unnamed protein product [Oikopleura dioica]
Length = 531
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 87/154 (56%), Gaps = 12/154 (7%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
++ ++ H L+S +WV ++ VYD+TEF Q HPGG + ++ AAG + PFW +Y H
Sbjct: 67 FTADEVSKHNSLES-LWVSYKGKVYDVTEFAQAHPGGAKNLLLAAGKDLAPFWGLYQQHS 125
Query: 82 QDEVFELLESYRIGNISQEDSKLAA-KDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSM 140
D V E+L Y IG + + K + K + Y EP R P +K + P+N EPPPS+
Sbjct: 126 ADHVQEILARYCIGKLDPKSVKKSCLKSDKNTAYSNEPERHPAMKINNPTPFNGEPPPSL 185
Query: 141 LVENFLTPSLL---------SQVGSSTITLDQAI 165
L+ +F+TP+ L +V +T TLD ++
Sbjct: 186 LLRSFITPNELHFIRNRLPVPEVDIATFTLDVSL 219
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPS-TDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
K+ +S ES S Q+ DYK F P+ T+ + + ++P++Q LPV SAI P K
Sbjct: 373 KISVSAEESESPTQRRDYKLFGPNVTNVKNIPWEQAPSVQYLPVTSAILEPSTGTK---- 428
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLT-RHWGWTLWRATIP 366
GYA+SG G I RVD+++D G+TW ++ P T + + WTLW +
Sbjct: 429 -------GYAYSGAGNGITRVDISVDGGQTWTQTEIFNEND--PYTQKSFAWTLWNFELE 479
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ KE I + ID N P+++ A++
Sbjct: 480 IPEDIKEDKIEICIRA-----IDSNCNTQPEKIDALW 511
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 33/44 (75%)
Query: 475 DVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
D++ +EI +A+DS+ NTQPE +WN+RG+L+N++HR+ +
Sbjct: 483 DIKEDKIEICIRAIDSNCNTQPEKIDALWNIRGLLNNSWHRIEL 526
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 397 DQMKAMF-AEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGAR 455
D++K F E T G + A++ DK+ V GL+WG A+ A W G
Sbjct: 230 DELKEKFEVIEMPVTLMCAGNRRSEFNAQVKDKK------VNGLSWGQCAISTARWKGVL 283
Query: 456 LVDVLKAAGISPDQSLDSADVQHVHVE 482
L D+L+ AGIS Q + + H+ VE
Sbjct: 284 LTDILEHAGIS-YQECRAKGLVHLRVE 309
>gi|328869577|gb|EGG17954.1| Putative sulfite oxidase [Dictyostelium fasciculatum]
Length = 1103
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%), Gaps = 6/119 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD--FAKSPAIQELPVISAICLPVADAKLKL 306
K+ +S ESTS +Q+ DYK F DW+ V+ + K+P++QEL + SAIC+P ++ L L
Sbjct: 220 KITVSSEESTSFFQRRDYKIFHSGVDWNNVEQYWDKTPSLQELSIQSAICIPAPNSHLFL 279
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATI 365
+ GYA SGGG+ I RVDV++D G TW A G++ + ++WGWTL+R TI
Sbjct: 280 P---FSIYGYATSGGGRKIERVDVSLDGGETWDYAELMGEE-KGNSNKYWGWTLFRYTI 334
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 429 ENFEVKPVKGLTWGHAAV-----GNAT----WTGARLVDVLKAAGISPDQSLDSADVQHV 479
E +V G TW +A + GN+ WT R ++ + + + +
Sbjct: 296 ERVDVSLDGGETWDYAELMGEEKGNSNKYWGWTLFRYT----IKSLATNHHHTTGNKSSI 351
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSN 511
+ I +A DS+ NTQP+ +IWNLRGV++N
Sbjct: 352 PIRICCRAWDSASNTQPKDVKDIWNLRGVMNN 383
>gi|432092479|gb|ELK25094.1| CCA tRNA nucleotidyltransferase 1, mitochondrial [Myotis davidii]
Length = 361
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 132/312 (42%), Gaps = 87/312 (27%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTV---------------------- 609
MK+ SPEF S FT LK L +F K ++LRIAG G V
Sbjct: 27 MKVQSPEFQSLFTEGLKSLTELFAKENHELRIAG-GAVRDLLSGVKPQDVDFATTATPEQ 85
Query: 610 ------TAKVLSYRNRREKEDRIG---ENQPFRKLTLSV------------------QDK 642
A V N+ EK + +N+ F TL + QD
Sbjct: 86 MKGLFQAAGVRMINNKGEKHGTVTARLQNENFEITTLRIDVVTDGRHAEVEFTTDWQQDA 145
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R DGT+YDYFNG+EDLK FVG RIQEDYLRILRYFR
Sbjct: 146 ERRDLTVNSMFLGFDGTLYDYFNGYEDLKNKKVRFVGHAKKRIQEDYLRILRYFRRVRSA 205
Query: 695 ---CNNPNNHKEEVLSAIKNNLDGLHN------ISGERIWTELNKI-LGGSFSKEM---- 740
P N E + N+DGL S ++ ++ K+ L SKE
Sbjct: 206 PVPTGLPANASLEEFDRVSRNVDGLSPKPMTLLASLFKVQDDVTKLDLRLKISKEEKNLG 265
Query: 741 MLKMLYQNLLLFSKLKATTMREY---------------IVELMKYKEKSELIKDFHKWRL 785
+ + Y+N L + + ++ Y I EL+KY+ + L++D +W +
Sbjct: 266 LFLVKYRNDLTKATDSSEPLKPYQDFIIDSREPDAAARIWELLKYQGQPGLLRDLQQWSV 325
Query: 786 PTFPMNGNIIRQ 797
P+FP++G+ IR+
Sbjct: 326 PSFPVSGHDIRK 337
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP+QMK +F VR N KGEKHGTV AR+ + ENFE+
Sbjct: 62 AVRDLLSGVKPQDVDFATTATPEQMKGLFQAAGVRMINNKGEKHGTVTARLQN-ENFEIT 120
Query: 435 PVK 437
++
Sbjct: 121 TLR 123
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLTVNSMFLG
Sbjct: 119 ITTLRIDVVTDGRHAEVEFTTDWQQDAERRDLTVNSMFLGF 159
>gi|171681499|ref|XP_001905693.1| hypothetical protein [Podospora anserina S mat+]
gi|170940708|emb|CAP65936.1| unnamed protein product [Podospora anserina S mat+]
Length = 657
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 23 YSLSDI-QNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHL 81
Y LS+I Q+H WV VY+IT ++ HPGG++I++AAGGS+EP+W ++ +H
Sbjct: 83 YHLSEIHQSHGPTSPEPWVTLNNKVYNITSWLPAHPGGDVILRAAGGSLEPYWEIFTIHN 142
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIAS---DPYVMEPVRSPLLKATSLKPYNAEPPP 138
V E+LE Y IG I D K A+ DP+V +PVR L + KP NAEPP
Sbjct: 143 SPHVKEILEEYLIGYIHPSDLGPDGKPPATSIEDPFVNDPVRDKRLITHTYKPRNAEPPN 202
Query: 139 SMLVENFLT 147
L + F T
Sbjct: 203 QELDKGFYT 211
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 277 TVDFAKSP---AIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTID 333
T+D A +P P S P + +N + +QGYA+SGGG+ I RVDV++D
Sbjct: 435 TIDMAATPQKVGFTPKPTSSDGNTPCPETTP--DNEPIALQGYAYSGGGRKITRVDVSLD 492
Query: 334 QGRTWHVANFTGQDSQAPLT-----RHWGWTLWR--ATIPV 367
G TW A D P T + WGWT WR T+PV
Sbjct: 493 GGATWDQAQLV-DDCSNPATPCYGNKSWGWTRWRYNGTLPV 532
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D SYNTQPES I+N+RG L+ A+HRV++
Sbjct: 577 KATDESYNTQPESHKGIYNVRGNLATAWHRVKI 609
Score = 39.7 bits (91), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 424 RMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQ 477
R ND K GL WG A+ NA W G +L D+LK AG+ +Q + D+
Sbjct: 268 RRNDMTRHAGK-TNGLQWGVGAISNAVWEGVKLKDLLKDAGLELEQQENEKDMH 320
>gi|398390555|ref|XP_003848738.1| hypothetical protein MYCGRDRAFT_101503 [Zymoseptoria tritici
IPO323]
gi|339468613|gb|EGP83714.1| hypothetical protein MYCGRDRAFT_101503 [Zymoseptoria tritici
IPO323]
Length = 527
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 12/146 (8%)
Query: 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAM 76
++ P + L+++ H WV+ VYDIT+F+ HPGGE+I++A G +I+P+W +
Sbjct: 36 LADTPTFRLAEVIQHDRNADRKWVIRGNAVYDITDFIACHPGGEVILRACGSTIDPYWKL 95
Query: 77 YGVHLQDEVFELLESYRIGNISQEDSKLAAK-DIAS----------DPYVMEPVRSPLLK 125
+ +H + EV +L+ Y IG+I + D A + D S DP+ +P R P L
Sbjct: 96 FSIHDKPEVRSILDGYYIGDIDERDLTDAGEVDWCSVNGLEDGCIVDPFKDDPERDPRLI 155
Query: 126 ATSLKPYNAEPPPSMLVENFLTPSLL 151
+ KP NAE P +L +F+TP L
Sbjct: 156 VQTAKPCNAETPGGLL-NDFITPVRL 180
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 166 VSKQLSSFKHSDEKLKLVKVMAGNISQEDSK--LAAKDIASDPYVMEPVRSPLLKATSLK 223
V K SS H ++ K V A + + E S A + SD + + +
Sbjct: 279 VDKACSSSPHDEDADKHVHFCAPSDTYEQSVPIQTALNPTSDVLLAWEMNGESMTRDHGG 338
Query: 224 PYNAEPPPSMLYSSLLRIPFCSHTGKVILSDHESTSHWQQNDYKGFSPST---DWDTVDF 280
P A P S+ S+ + GKV +S ES S+W DYK F P+ D D+
Sbjct: 339 PLRAIVPGSVATRSVKWV------GKVRISGEESQSNWHARDYKCFGPNVRAKDLKPEDW 392
Query: 281 AKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHV 340
+ +IQE+PV SAI V +K + +QG+A+SGGG+ IVRVDV+ D G+TW
Sbjct: 393 EGAQSIQEMPVQSAI-TNVVCSKGGDNGRKASLQGFAYSGGGRKIVRVDVSADGGQTWQQ 451
Query: 341 ANFTGQDSQAPLTRHWGWTLW-----RATIPVDPKTKE--VSIMDMLMGKKPHDIDFATN 393
A G +++ TR W WTLW +P D + E V +D +P D N
Sbjct: 452 ARLKGDEAKG--TRRWAWTLWDIDWADEQLPKDGRQAEFVVKAVDEAYNCQPQTFDATWN 509
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRV 516
KAVD +YN QP++F WN RG+L NA+HRV
Sbjct: 491 KAVDEAYNCQPQTFDATWNFRGLLGNAWHRV 521
>gi|119617274|gb|EAW96868.1| sulfite oxidase, isoform CRA_b [Homo sapiens]
Length = 185
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 85 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 144
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSP 122
Q V ELL Y+IG ++ ED K+A SDPY +PVR P
Sbjct: 145 QSHVRELLAQYKIGELNPED-KVAPTVETSDPYADDPVRHP 184
>gi|325303458|tpg|DAA34150.1| TPA_inf: hypothetical conserved secreted protein 1239 [Amblyomma
variegatum]
Length = 165
Score = 99.8 bits (247), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 61/92 (66%)
Query: 5 VKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMK 64
V A + +A E + LP Y+ +++ H ++ IW+ FR GVYD+T+FV HPGG+ I+
Sbjct: 74 VHAKQETKADEAVDGLPVYTAAEVAKHDRKETRIWISFRCGVYDVTDFVDEHPGGDKILL 133
Query: 65 AAGGSIEPFWAMYGVHLQDEVFELLESYRIGN 96
AGG I+PFW +Y VH E+ LLE++RIGN
Sbjct: 134 GAGGGIDPFWNIYAVHKTPEILTLLETFRIGN 165
>gi|440633222|gb|ELR03141.1| hypothetical protein GMDG_05970 [Geomyces destructans 20631-21]
Length = 331
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 74/121 (61%), Gaps = 14/121 (11%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICL---PVADAKLK 305
K+ +SD EST+ WQ+ DYK F P+ D++K+P+IQE+PV SAI P A K+
Sbjct: 164 KITVSDEESTTQWQRRDYKCFGPNVA--KPDWSKAPSIQEMPVTSAITRIQRPEAGGKVN 221
Query: 306 LENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATI 365
+E GYA+SGGG+ IVRVDV+ID G+TW A G + + ++ W W WR I
Sbjct: 222 VE-------GYAYSGGGREIVRVDVSIDAGKTWAQAELMGDEGKG--SKSWWWKRWRFEI 272
Query: 366 P 366
P
Sbjct: 273 P 273
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
E+ KA D SYNTQPE + IWN RG LS A+H V V
Sbjct: 281 EVLVKATDESYNTQPEDYRGIWNQRGNLSCAWHGVHV 317
>gi|453080928|gb|EMF08978.1| molybdopterin binding oxidoreductase [Mycosphaerella populorum
SO2202]
Length = 610
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 11/135 (8%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQ 82
+ LS++ H SS WV+ VYDIT FV HPGGE+I++A G SI+P+WA++ +H +
Sbjct: 135 FRLSEVVQHDRSSSSKWVIHGTSVYDITSFVDAHPGGEVILRACGSSIDPYWALFSIHNK 194
Query: 83 DEVFELLESYRIGNISQED---------SKLAAKDIASDPYVMEPVRSPLLKATSLKPYN 133
EV ++L+ Y IG + ++D S + + DP+ +P R L + KP N
Sbjct: 195 PEVRKILDEYYIGELDEQDLDDRGSIKWSGVQGCSV-EDPFSDDPERDAELIVRTPKPCN 253
Query: 134 AEPPPSMLVENFLTP 148
AE P L +F+TP
Sbjct: 254 AETPGRFL-GDFITP 267
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSP---STDWDTVDFAKSPAIQELPVISAICLPVADAKL 304
G V +S ES S+W DYK F+P + D D+ + +IQE+PV SAI V
Sbjct: 446 GTVRISCEESQSNWHSRDYKCFAPNVRAADLKPEDWDAAQSIQEMPVQSAI-TDVCRRDD 504
Query: 305 KLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRAT 364
LE + V GYA+SGGG+ IVRVDV+ D G+TW A +++ R W WT W
Sbjct: 505 ALE--PIRVHGYAYSGGGRKIVRVDVSADGGKTWEPACLRKDNAKG--ARRWAWTQWTIE 560
Query: 365 IPVD 368
P D
Sbjct: 561 WPKD 564
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVE 519
E KAVD YNTQP++F WN RG+L NA+HRV +E
Sbjct: 572 EFVCKAVDEGYNTQPQTFDATWNFRGLLGNAWHRVSLE 609
>gi|198422855|ref|XP_002122885.1| PREDICTED: similar to tRNA nucleotidyl transferase, CCA-adding, 1
[Ciona intestinalis]
Length = 488
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 96/232 (41%), Gaps = 57/232 (24%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
+KL SP F + FT E + + +FEK ++LR G
Sbjct: 78 IKLQSPLFTNLFTDEFRFVQHLFEKENHELRFCGGAVRDLLLGKAPHDLDLATTATPTEM 137
Query: 606 ------------------EGTVTAKV-------LSYRNRREKEDRIGENQPFRKLTLSVQ 640
GTVT +V + R R + R + + L
Sbjct: 138 IEMFRKNDVRLICENGWSHGTVTCRVEEQNFEITTLRIDRVTDGRRALVEYTKDWYLDAS 197
Query: 641 DKDRS-----FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
+D + + G V DYFNG D+K FVGDP RIQEDYLRILRYFRFF R+
Sbjct: 198 RRDLTCNSLFLTMSGNVIDYFNGISDVKDKKVRFVGDPALRIQEDYLRILRYFRFFGRLK 257
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
P E L I GL ++GER W E IL G +++KM+Y+
Sbjct: 258 EEPAIPDESTLQEITKYGSGLGGVAGERKWVEFTMILNGRLLV-LIMKMMYR 308
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 34/41 (82%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID TDGR A V++T+DW LDA+RRDLT NS+FL M
Sbjct: 170 ITTLRIDRVTDGRRALVEYTKDWYLDASRRDLTCNSLFLTM 210
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L+GK PHD+D AT ATP +M MF + VR E G HGTV R+ +++NFE+
Sbjct: 113 AVRDLLLGKAPHDLDLATTATPTEMIEMFRKNDVRLICENGWSHGTVTCRV-EEQNFEIT 171
Query: 435 PVK 437
++
Sbjct: 172 TLR 174
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 34/80 (42%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+FF R+ P E L I K GL ++GER W E IL G +M M
Sbjct: 251 RFFGRLKEEPAIPDESTLQEITKYGSGLGGVAGERKWVEFTMILNGRLLVLIMKMMYRCG 310
Query: 857 MFPHLGTDETFATLDFEGLF 876
+ LG E +FE ++
Sbjct: 311 ILKQLGLPEQVDLEEFENVY 330
>gi|336466993|gb|EGO55157.1| hypothetical protein NEUTE1DRAFT_123662 [Neurospora tetrasperma
FGSC 2508]
Length = 728
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
Query: 15 EPISTLPWYSLSDIQN-HKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPF 73
EP+S P Y LS+I++ H ++ WV + VYDIT +V HPGG++I++AAGG IEP+
Sbjct: 160 EPLSR-PRYRLSEIRSQHSSTSNTPWVTYADKVYDITSWVGAHPGGDVILRAAGGPIEPY 218
Query: 74 WAMYGVHLQDE-VFELLESYRIGNISQED----SKLAAKDIASDPYVMEPVRSPLLKATS 128
W ++ +H V ++LE Y IG I ED +K D DP+ +P R L +
Sbjct: 219 WDIFTIHKTSPYVRDILEQYCIGYIHVEDLDPVTKRPKMDKIEDPFEKDPERDERLVTHT 278
Query: 129 LKPYNAEPPPSMLVENFLT 147
KP NAE P ++ +F T
Sbjct: 279 AKPRNAETPSDLVGADFKT 297
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 47/141 (33%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAI------------- 295
K+++SD ES S WQ+ DYK F P+ + D+ ++ +IQE+PV SAI
Sbjct: 497 KIVVSDEESPSQWQRRDYKSFGPNEGANP-DWERARSIQEMPVTSAITGVWVGSDCLKGK 555
Query: 296 ------------------------CLPVADAKLKL-------ENHQMEV--QGYAWSGGG 322
C A + N Q+ + QGYA+SGGG
Sbjct: 556 YQSDDNKQKETTVDLAGVDGLKVGCSKTATTTIATPSPSSVETNPQIPITMQGYAYSGGG 615
Query: 323 KAIVRVDVTIDQGRTWHVANF 343
+AI RVDV++D GRTW A
Sbjct: 616 RAIARVDVSLDNGRTWDQAEL 636
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA+D +YNTQPES A I+N+RG L+ A+HRVR+
Sbjct: 641 KAIDEAYNTQPESHAGIYNVRGNLATAWHRVRI 673
>gi|350288392|gb|EGZ69628.1| hypothetical protein NEUTE2DRAFT_116299 [Neurospora tetrasperma
FGSC 2509]
Length = 715
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
Query: 15 EPISTLPWYSLSDIQN-HKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPF 73
EP+S P Y LS+I++ H ++ WV + VYDIT +V HPGG++I++AAGG IEP+
Sbjct: 160 EPLSR-PRYRLSEIRSQHSSTSNTPWVTYADKVYDITSWVGAHPGGDVILRAAGGPIEPY 218
Query: 74 WAMYGVHLQDE-VFELLESYRIGNISQED----SKLAAKDIASDPYVMEPVRSPLLKATS 128
W ++ +H V ++LE Y IG I ED +K D DP+ +P R L +
Sbjct: 219 WDIFTIHKTSPYVRDILEQYCIGYIHVEDLDPVTKRPKMDKIEDPFEKDPERDERLVTHT 278
Query: 129 LKPYNAEPPPSMLVENFLT 147
KP NAE P ++ +F T
Sbjct: 279 AKPRNAETPSDLVGADFKT 297
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 47/141 (33%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAI------------- 295
K+++SD ES S WQ+ DYK F P+ + D+ ++ +IQE+PV SAI
Sbjct: 497 KIVVSDEESPSQWQRRDYKSFGPNEGANP-DWERARSIQEMPVTSAITGVWVGSDCLKGK 555
Query: 296 ------------------------CLPVADAKLKL-------ENHQMEV--QGYAWSGGG 322
C A + N Q+ + QGYA+SGGG
Sbjct: 556 YQSDDNKQKETTVDLAGVDGLKVGCSKTATTTIATPSPSSVETNPQIPITMQGYAYSGGG 615
Query: 323 KAIVRVDVTIDQGRTWHVANF 343
+AI RVDV++D GRTW A
Sbjct: 616 RAIARVDVSLDNGRTWDQAEL 636
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA+D +YNTQPES A I+N+RG L+ A+HRVR+
Sbjct: 641 KAIDEAYNTQPESHAGIYNVRGNLATAWHRVRI 673
>gi|336261364|ref|XP_003345471.1| hypothetical protein SMAC_07458 [Sordaria macrospora k-hell]
gi|380088147|emb|CCC13822.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 817
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 12/143 (8%)
Query: 15 EPISTLPWYSLSDIQN-HKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPF 73
EP+S LP + LS+I++ H S WV + VYDIT++V HPGG++I++AAGG IEP+
Sbjct: 163 EPLS-LPRFHLSEIRSAHCSTSDSPWVTYNDKVYDITDWVGAHPGGDVILRAAGGPIEPY 221
Query: 74 WAMYGVHLQD-EVFELLESYRIGNISQED-----SKLAAKDIASDPYVMEPVRSPLLKAT 127
W ++ +H V E+LE Y IG I +D +K ++I DP+ +P R L
Sbjct: 222 WDIFSIHKNSPHVREILEQYCIGYIHMDDLDPKTTKPKMEEI-EDPFAQDPQRDSRLVTH 280
Query: 128 SLKPYNAEPPPSMLVE---NFLT 147
+ KP NAE P ++ FLT
Sbjct: 281 TAKPRNAETPSELVASGEGGFLT 303
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 74/172 (43%), Gaps = 64/172 (37%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPST----DWDTVDFAKSPAIQELPVISAIC-LPVADAK 303
K+++SD ES S WQ+ DYK F P+ DWD ++ +IQE+PV SAI + V
Sbjct: 504 KIVVSDEESLSQWQRRDYKSFGPNEGANPDWD-----RAKSIQEMPVTSAITGVWVGSDC 558
Query: 304 LKLENHQ------------------------------------------------MEVQG 315
L+ +N Q + +QG
Sbjct: 559 LRSKNKQEKGVGQKTVDLAGVDGLKVGCTKTTTTTATPSSSQPSSPTTESNGKIPIAMQG 618
Query: 316 YAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLT-----RHWGWTLWR 362
YA+SGGG+AI RVDV++D GRTW A D P T + W W W+
Sbjct: 619 YAYSGGGRAIARVDVSLDNGRTWDQAELI-DDCSNPATPCYGNKTWTWKRWK 669
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KAVD +YNTQPES A I+N+RG L+ A+HRVR+
Sbjct: 710 KAVDEAYNTQPESHAGIYNVRGNLATAWHRVRI 742
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 408 VRTFNEKGEKHGTV----CA--RMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLK 461
+R E+ ++H C+ R ND K GL WG A+ NA W G L DVL+
Sbjct: 344 LRELKERFQRHKVTATLQCSGNRRNDMTRHTGK-TNGLQWGVGAISNAEWEGVLLRDVLR 402
Query: 462 AAGIS-PDQSLDSADVQHV 479
AG+ D S +A VQH
Sbjct: 403 DAGLKVKDPSTATAVVQHA 421
>gi|353229964|emb|CCD76135.1| putative sulfite reductase [Schistosoma mansoni]
Length = 596
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Query: 24 SLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQD 83
+L ++ H + +WV F+ VYD+T FV HPGG+ I+ AAG + FW++Y H Q
Sbjct: 67 TLEELAQHNCKEHGVWVSFKGKVYDVTNFVDDHPGGDKILLAAGSDVSSFWSVYAFHYQS 126
Query: 84 EVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVE 143
V ++LE Y IG + + D ++ D Y +P R+P LK S +P+NAE P +
Sbjct: 127 HVLKILEKYYIGELDKSD--FIEEENNEDIYGSDPQRNPDLKVVSQRPFNAETPLPSIGS 184
Query: 144 NFLTPSLL 151
N +TP+ L
Sbjct: 185 NPITPTDL 192
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G++ LS ES S WQ+ DYK P + D PAI + PV S IC P +D +
Sbjct: 392 GQITLSTDESESFWQKGDYKYVLPMSGGKVPDLKGLPAILDYPVQSVICKP-SDGQTLKN 450
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFT------GQDSQAPLTRH------ 355
+ + GYA+SGGG+ I+ V V+ D GR+W+ A + GQ + H
Sbjct: 451 TGSVSLSGYAFSGGGRGIISVRVSSDGGRSWYEAKLSPASPPAGQGYVTDMDNHYSLKNR 510
Query: 356 ----WGWTLWRATIPVDPKT 371
W WTLW IP+ K
Sbjct: 511 SVKQWAWTLWTVEIPIPSKC 530
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVE 519
VE AVDSSYNTQPES + N+RG+LSN +HR+ ++
Sbjct: 553 VEFVCSAVDSSYNTQPESCSATLNIRGLLSNCWHRINIK 591
>gi|148261002|ref|YP_001235129.1| polynucleotide adenylyltransferase [Acidiphilium cryptum JF-5]
gi|338990647|ref|ZP_08634479.1| Polynucleotide adenylyltransferase region [Acidiphilium sp. PM]
gi|146402683|gb|ABQ31210.1| Polynucleotide adenylyltransferase region [Acidiphilium cryptum
JF-5]
gi|338205458|gb|EGO93762.1| Polynucleotide adenylyltransferase region [Acidiphilium sp. PM]
Length = 389
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ R DGT++DYF G +DL G+ FVGDP +RIQED+LRILR+
Sbjct: 104 EDAARRDFTINAMSMAR----DGTIHDYFGGRDDLAAGIVRFVGDPTTRIQEDFLRILRF 159
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
FRF AR P + + ++AI+ GL +S ER+W E+ +IL
Sbjct: 160 FRFHARYEAGPPD--QAAVAAIRALKGGLARLSAERVWQEIKRILAA 204
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 13/116 (11%)
Query: 830 ERIWTEL--NKILGGSFSKEMMLKML-EINMFPHLGTDETFATLDFEGLFRSMPI----- 881
ER+WT L +++GG+ + + + +I++ L E AT + R++P
Sbjct: 9 ERLWTVLPEARVVGGAVRDRLAGRPISDIDLASPL-PPEAVATRLAKAGIRAVPTGLDHG 67
Query: 882 PFTLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
T + F ITTLR D+ TDGRHA V FT+DW+ DA RRD T+N+M +
Sbjct: 68 TITAVLDGRHFE----ITTLRRDLETDGRHAVVAFTDDWREDAARRDFTINAMSMA 119
>gi|326404402|ref|YP_004284484.1| CCA-adding enzyme [Acidiphilium multivorum AIU301]
gi|325051264|dbj|BAJ81602.1| CCA-adding enzyme [Acidiphilium multivorum AIU301]
Length = 403
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S DGT++DYF G +DL G+ FVGDP +RIQED+LRILR+FRF AR P + +
Sbjct: 131 SMARDGTIHDYFGGRDDLAAGIVRFVGDPTTRIQEDFLRILRFFRFHARYEAGPPD--QA 188
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGG 734
++AI+ GL +S ER+W E+ +IL
Sbjct: 189 AVAAIRALKGGLARLSAERVWQEIKRILAA 218
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 13/116 (11%)
Query: 830 ERIWTEL--NKILGGSFSKEMMLKML-EINMFPHLGTDETFATLDFEGLFRSMPI----- 881
ER+WT L +++GG+ + + + +I++ L E AT + R++P
Sbjct: 23 ERLWTVLPEARVVGGAVRDRLAGRPISDIDLASPL-PPEAVATRLAKAGIRAVPTGLDHG 81
Query: 882 PFTLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
T + F ITTLR D+ TDGRHA V FT+DW+ DA RRD T+N+M +
Sbjct: 82 TITAVLDGRHFE----ITTLRRDLETDGRHAVVAFTDDWREDAARRDFTINAMSMA 133
>gi|256079748|ref|XP_002576147.1| sulfite reductase [Schistosoma mansoni]
Length = 576
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Query: 24 SLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQD 83
+L ++ H + +WV F+ VYD+T FV HPGG+ I+ AAG + FW++Y H Q
Sbjct: 67 TLEELAQHNCKEHGVWVSFKGKVYDVTNFVDDHPGGDKILLAAGSDVSSFWSVYAFHYQS 126
Query: 84 EVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVE 143
V ++LE Y IG + + D ++ D Y +P R+P LK S +P+NAE P +
Sbjct: 127 HVLKILEKYYIGELDKSD--FIEEENNEDIYGSDPQRNPDLKVVSQRPFNAETPLPSIGS 184
Query: 144 NFLTPSLL 151
N +TP+ L
Sbjct: 185 NPITPTDL 192
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 77/172 (44%), Gaps = 24/172 (13%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G++ LS ES S WQ+ DYK P + D PAI + PV S IC P +D +
Sbjct: 392 GQITLSTDESESFWQKGDYKYVLPMSGGKVPDLKGLPAILDYPVQSVICKP-SDGQTLKN 450
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFT------GQDSQAPLTRH------ 355
+ + GYA+SGGG+ I+ V V+ D GR+W+ A + GQ + H
Sbjct: 451 TGSVSLSGYAFSGGGRGIISVRVSSDGGRSWYEAKLSPASPPAGQGYVTDMDNHYSLKNR 510
Query: 356 ----WGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
W WTLW IP+ +EV + +D + N P+ A
Sbjct: 511 SVKQWAWTLWTVEIPIPKDIREVEFV-------CSAVDSSYNTQPESCSATL 555
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVE 519
VE AVDSSYNTQPES + N+RG+LSN +HR+ ++
Sbjct: 533 VEFVCSAVDSSYNTQPESCSATLNIRGLLSNCWHRINIK 571
>gi|85092203|ref|XP_959278.1| hypothetical protein NCU06931 [Neurospora crassa OR74A]
gi|28920681|gb|EAA30042.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 734
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 7/139 (5%)
Query: 15 EPISTLPWYSLSDIQN-HKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPF 73
EP+S LP + LS+I++ H ++ WV + VYDIT +V HPGG++I++AAGG IEP+
Sbjct: 160 EPLS-LPRFRLSEIRSQHSSASNTPWVTYADKVYDITSWVGAHPGGDVILRAAGGPIEPY 218
Query: 74 WAMYGVHLQDE-VFELLESYRIGNISQED----SKLAAKDIASDPYVMEPVRSPLLKATS 128
W ++ +H V ++LE Y IG I +D +K D DP+ +P R L +
Sbjct: 219 WDIFTIHKTSPYVRDILEQYCIGYIHMDDLDPVTKRPKMDKIEDPFENDPERDERLVTHT 278
Query: 129 LKPYNAEPPPSMLVENFLT 147
KP NAE P ++ +F T
Sbjct: 279 AKPRNAETPSDLVGADFKT 297
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 60/149 (40%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAI--------CLPVA 300
K+++SD ES S WQ+ DYK F P+ + D+ ++ +IQE+PV SAI CL
Sbjct: 497 KIVVSDEESPSQWQRRDYKSFGPNEGANP-DWERAKSIQEMPVTSAITGVWVGSDCL--- 552
Query: 301 DAKLKLENHQ----------------------------------------------MEVQ 314
K K ++H + +Q
Sbjct: 553 --KGKYQSHDNKQKETTVDLAGVDGLKVGCSKTATATTTTATPSGPSPVETKPKIPITMQ 610
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
GYA+SGGG+AI RVDV++D GRTW A
Sbjct: 611 GYAYSGGGRAIARVDVSLDNGRTWDQAEL 639
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA+D +YNTQPES A I+N+RG L+ A+HRVR+
Sbjct: 644 KAIDEAYNTQPESHAGIYNVRGNLATAWHRVRI 676
>gi|312075805|ref|XP_003140580.1| hypothetical protein LOAG_04995 [Loa loa]
gi|307764256|gb|EFO23490.1| hypothetical protein LOAG_04995 [Loa loa]
Length = 438
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 105/231 (45%), Gaps = 64/231 (27%)
Query: 573 KLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTAKVLSYR--------------- 617
K+D+P+F + FTPEL +L +F+++ +QLR+AG G V ++ +
Sbjct: 12 KIDTPQFKALFTPELIKLNDLFKRNNFQLRMAG-GAVRDLLMGIKPSDIDFATNATPEEM 70
Query: 618 ------------NRREKED-----RIGENQPFRKLTLSVQ------------------DK 642
N+ +E RI + + F TL + D
Sbjct: 71 KELFIREGIRMLNKNGEEHGTITCRIDDKENFEITTLRIDIVCDGRRAKIEFTTSWQLDA 130
Query: 643 DRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+R LDGTV+DYF G +DL+K FVGD RIQ+ + F FF R+
Sbjct: 131 NRRDLTVNSLFLDLDGTVFDYFGGIKDLEKRRIVFVGDANQRIQD-----ITIFPFFGRL 185
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
+ H++ L AI +N GL +ISGERIWTEL KI G ++ ML
Sbjct: 186 ALDGEAHEKATLDAIISNGHGLKDISGERIWTELKKICVGRLGDAVLTTML 236
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 49/63 (77%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG KP DIDFATNATP++MK +F E +R N+ GE+HGT+ R++DKENFE+
Sbjct: 46 AVRDLLMGIKPSDIDFATNATPEEMKELFIREGIRMLNKNGEEHGTITCRIDDKENFEIT 105
Query: 435 PVK 437
++
Sbjct: 106 TLR 108
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 35/41 (85%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID+ DGR A+++FT W+LDANRRDLTVNS+FL +
Sbjct: 104 ITTLRIDIVCDGRRAKIEFTTSWQLDANRRDLTVNSLFLDL 144
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 777 IKDFHKWRLPTFPMNGN------IIRQFFARICNNPNNHKEEVLSAIKKNLDGLHNISGE 830
IKD K R+ F + N I FF R+ + H++ L AI N GL +ISGE
Sbjct: 155 IKDLEKRRI-VFVGDANQRIQDITIFPFFGRLALDGEAHEKATLDAIISNGHGLKDISGE 213
Query: 831 RIWTELNKILGGSFSKEMMLKMLE-INMFPHLGTDE 865
RIWTEL KI G ++ ML+ N+ LG E
Sbjct: 214 RIWTELKKICVGRLGDAVLTTMLKRCNLASLLGLPE 249
Score = 39.7 bits (91), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 744 MLYQNLLL-------FSKLKATTMREYIVELMKYKE-KSELIKDFHKWRLPTFPMNG 792
+ ++N+LL F++ K T RE ++EL KY ELI + + W+ P FP+ G
Sbjct: 318 LFFKNMLLNEERLHKFTRKKVQTSREKVIELAKYTMVDDELISELNAWKTPVFPVGG 374
>gi|66828903|ref|XP_647805.1| hypothetical protein DDB_G0278893 [Dictyostelium discoideum AX4]
gi|60470067|gb|EAL68048.1| hypothetical protein DDB_G0278893 [Dictyostelium discoideum AX4]
Length = 398
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 8/157 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD--FAKSPAIQELPVISAICLPVADAKLKL 306
KV +S ES S +Q+ DYK F DW+ V+ + K+P++QEL + SAIC+P ++ L L
Sbjct: 222 KVTVSSQESESFFQRRDYKIFHNGVDWNNVEKYWDKTPSLQELSIQSAICIPAPNSTLYL 281
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIP 366
+ GYA SGGG+ + RVD+++D G TW A G+D + ++W W L++ TI
Sbjct: 282 P---FTITGYATSGGGRKVERVDISLDGGETWDYAELMGED-KGVCNKYWSWVLFKYTIT 337
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P+ + + + + D A+N P +K ++
Sbjct: 338 QLPQLQNKDHQKIRLVCRAWDS--ASNTQPKDVKDIW 372
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 429 ENFEVKPVKGLTWGHA-------AVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
E ++ G TW +A V N W+ VL I+ L + D H +
Sbjct: 298 ERVDISLDGGETWDYAELMGEDKGVCNKYWSW-----VLFKYTITQLPQLQNKD--HQKI 350
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEIWSKAV 525
+ +A DS+ NTQP+ +IWNLRGV++N +H V + + ++++
Sbjct: 351 RLVCRAWDSASNTQPKDVKDIWNLRGVMNNCWHFVDITVLNQSI 394
>gi|340966804|gb|EGS22311.1| putative molybdenum ion binding protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 682
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYG 78
+LP Y LS I+ H WV VY+IT +V HPGG+II++AAG SI+P+W ++
Sbjct: 101 SLPRYRLSTIRQHDAHSPEPWVTSSDKVYNITSWVSAHPGGDIILRAAGKSIDPYWEIFS 160
Query: 79 VHLQDEVFELLESYRIGNISQEDSKLAAK---DIASDPYVMEPVRSPLLKATSLKPYNAE 135
+H Q V E+L+ Y IG I D + + DP+ +P R L + KP NAE
Sbjct: 161 IHKQPHVREILDQYLIGYIDVADLGPDGRPKMEEVEDPFEGDPKRDERLVTLTAKPRNAE 220
Query: 136 PPPSMLVENFLT 147
P + F+T
Sbjct: 221 TPTGEVAREFIT 232
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 25/148 (16%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAIC------------ 296
K+ ++D E+TS WQ+ DYK F P+ + D+ ++ AIQE+PV SA+
Sbjct: 424 KIRVADEEATSQWQRRDYKCFGPNEGANP-DWERAVAIQEMPVTSAVTGVWVGSDVKRVP 482
Query: 297 ------LPVADAKLKLENHQMEV--QGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQ-- 346
L + K + + ++ EV QGYA+SGGG+AI RVD+++D G TW A
Sbjct: 483 WMGEKRLLATEEKGEGKKNEGEVALQGYAYSGGGRAIARVDISLDGGNTWDQAELVDDCA 542
Query: 347 DSQAPLTRHWGWTLWR--ATIPVDPKTK 372
+ ++ W WT WR T+P P T+
Sbjct: 543 GGKCKGSKAWAWTRWRYCGTLPSPPTTR 570
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
E+ KA D+SYN+QPE+ A I+N+RG L+ A+HR+RV
Sbjct: 607 TELIVKATDTSYNSQPETHAGIYNVRGNLATAWHRLRV 644
>gi|115623773|ref|XP_791058.2| PREDICTED: sulfite oxidase-like [Strongylocentrotus purpuratus]
Length = 383
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 14/153 (9%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVD--FAKSPAIQELPVISAICLPVADAKLKLENHQME 312
HEST+++Q+ DYK F P DWDT+D + KSP+IQE+PV +A P +
Sbjct: 220 HESTNYFQKRDYKLFLPHVDWDTIDDWWEKSPSIQEIPVQAAATRPQQGEAIT-PGTPYT 278
Query: 313 VQGYAWSGGGKAIVRVDVTIDQGRTWHVAN-FTG-QDSQAPLTRHWGWTLWRATIPVDPK 370
++GYA SGGG+ I+RVDV++D G+ W VA FT ++Q W W W + P
Sbjct: 279 IKGYALSGGGRKIIRVDVSLDGGKRWDVARLFTKVNENQTKANTKWSWEFWEFPVKAFPA 338
Query: 371 TKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
EV + D A+N PD + +++
Sbjct: 339 PCEVVV---------RAWDDASNTMPDDISSIW 362
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 403 FAEEKVRTFNEKGEKHGTV-CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLK 461
E++RT+ + T+ CA E +K V+G+ WGHAAV NA W G RL DVL
Sbjct: 72 LTAEQLRTWFPQATVMATLMCAGNRRTEMSAIKQVRGVVWGHAAVSNAIWRGPRLRDVLL 131
Query: 462 AAGI 465
AGI
Sbjct: 132 MAGI 135
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
E+ +A D + NT P+ ++IWNLRGVL+N++ R++V
Sbjct: 340 CEVVVRAWDDASNTMPDDISSIWNLRGVLNNSWVRIKV 377
>gi|403333395|gb|EJY65790.1| hypothetical protein OXYTRI_14052 [Oxytricha trifallax]
Length = 581
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 13 AGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIE 71
+G P P Y +D++ HK ++ IWV ++ VYDITEF+++HPGG E IM AGG +E
Sbjct: 82 SGTPQKNWPTYRATDVRMHKTKETGIWVSYKDSVYDITEFLKLHPGGTEKIMLGAGGQLE 141
Query: 72 PFWAMYGVHLQDEVFELLESYRIGNIS----QEDSKLAAKDIASDPYVMEPVRSPLLKAT 127
F+ Y H ++ V LL+ Y+IG + Q++S + +D +D + RS L
Sbjct: 142 AFFKFYPFHQKEHVQRLLQKYKIGLLHPDDVQQESNITFEDDETDEQLKN--RSKNLLIL 199
Query: 128 SLKPYNAEPPPSMLVENFLTPS 149
P AE P L ++F+TP+
Sbjct: 200 QEYPVIAETNPKYLTDDFITPA 221
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 244 CSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLP--VAD 301
C K+ +SD E+TS Q+ +YK + TD +D++K I + SAI P + +
Sbjct: 391 CKWVRKITISDEEATSPQQKENYK-YITETDPSKIDYSKIEPIWSYVINSAIVYPADLEN 449
Query: 302 AKLKLENHQMEVQGYAWSGGGK---AIVRVDVTIDQGRTWHVANFTGQ--DSQAPLTRHW 356
+++ EN ++++G+A +G K + +V ++ D G TW A T + ++ + +
Sbjct: 450 VQVRRENPYIDLKGWA-TGNMKDFTPVKKVQLSFDNGLTWRDAEITHKLDRDESKGEKTF 508
Query: 357 GWTLWRATIPV 367
W LWR + V
Sbjct: 509 TWVLWRYRLNV 519
>gi|71992539|ref|NP_001024736.1| Protein SUOX-1, isoform b [Caenorhabditis elegans]
gi|62554058|emb|CAI79198.1| Protein SUOX-1, isoform b [Caenorhabditis elegans]
Length = 178
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 15 EPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFW 74
+ + L Y +++ H IWV ++ GVYD+T+F+ MHPGG+ I+ AAG +++PFW
Sbjct: 74 KKLENLQIYKQEEVKKHGKDADRIWVTYKDGVYDVTDFIAMHPGGDKILLAAGAAVDPFW 133
Query: 75 AMYGVHLQDEVFELLESYRIGNISQED 101
A+Y H EV E+LE YRIG + +D
Sbjct: 134 ALYSQHKTKEVLEILEGYRIGKLDVKD 160
>gi|428176590|gb|EKX45474.1| sulfite oxidase [Guillardia theta CCMP2712]
Length = 539
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 85/138 (61%), Gaps = 6/138 (4%)
Query: 17 ISTLPWYSLSDIQNHKDLKSS-IWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFW 74
++ L Y+ +++ H ++ IWV ++ GVYDITEF++ HPGG I+ AAG +I+P+W
Sbjct: 67 VNNLKLYTKAEVAQHISREAGGIWVTYKDGVYDITEFIESHPGGASKILLAAGKAIDPYW 126
Query: 75 AMYGVHLQDEV-FELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYN 133
++ H + +LLES R+G+++ + ++ +DPY ++P+R L + P N
Sbjct: 127 NIFQQHFRTGFPLQLLESMRVGSLAPGEY---VEEKQADPYAVDPIRDERLILHNSAPCN 183
Query: 134 AEPPPSMLVENFLTPSLL 151
AE P ++E++LTP+ L
Sbjct: 184 AEIPEHYIMESYLTPNEL 201
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 27/164 (16%)
Query: 249 KVILSDHESTSHWQQN-DYKGFSPS-TDWD---TVDFAKSPAIQELPVISAICLPVADAK 303
+V +S+ E+ WQ+ YKGF+ + TD T ++ +QE PV S I P +AK
Sbjct: 356 EVFVSEQEAEGPWQRGVAYKGFASNITDLQHLPTHVIERAAPVQEPPVTSLIVHPANNAK 415
Query: 304 LKLENHQM------------EVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAP 351
+ + ++ +++G+A+SGGG+ IVRV+V+ID G++WH A + S+
Sbjct: 416 VHSQTLEVRREDVRVRVTGEQLKGWAYSGGGRGIVRVEVSIDGGKSWHTAELK-EGSEQK 474
Query: 352 LTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNAT 395
LTR W WT W A + V PK L GK + AT+A+
Sbjct: 475 LTRAWAWTFWSANVEV-PKE--------LQGKSSEIMCRATDAS 509
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 475 DVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
++Q EI +A D+SYN+QPE ++IWN+RG+ + A+HR V
Sbjct: 493 ELQGKSSEIMCRATDASYNSQPEHASSIWNVRGLCNTAWHRKTV 536
>gi|380475524|emb|CCF45210.1| sulfite oxidase [Colletotrichum higginsianum]
Length = 355
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPST----DWDTVDFAKSPAIQELPVISAICLPVADAKL 304
++ LSD ES S WQ+ DYK F P DWD+ +PAIQE+PV SAI ++
Sbjct: 168 RIALSDEESPSQWQRRDYKAFCPGEGPEPDWDS-----APAIQEMPVTSAITAAGVESPG 222
Query: 305 KLENHQMEV--QGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWR 362
+ V +GYA+SGGG+ +VRVDV+ D GRTW A + W W WR
Sbjct: 223 GATGREGRVKAEGYAYSGGGREVVRVDVSTDGGRTWKAAELIADKGVG--KKAWCWKRWR 280
Query: 363 ATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
PV + K L+ K D A N P+ ++++
Sbjct: 281 YEGPVADEGKVGEDGVRLVVKA---TDEAYNTQPESHESIY 318
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 472 DSADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
D V V + KA D +YNTQPES +I+N+RG L+ A+HRV V
Sbjct: 287 DEGKVGEDGVRLVVKATDEAYNTQPESHESIYNVRGNLATAWHRVHV 333
>gi|360042949|emb|CCD78359.1| putative homeobox protein [Schistosoma mansoni]
Length = 509
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC--NNPNNHKEE 704
R+ G + DYFNG +DLK FVGDP +RI+EDYLRILRYFRF R+ + + H E+
Sbjct: 298 RVLGHLLDYFNGRDDLKNHRIRFVGDPDARIKEDYLRILRYFRFHGRLLTEDTYDKHDED 357
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKIL 732
VL I +N +GL ISGER +EL +IL
Sbjct: 358 VLKIIASNANGLSMISGERCLSELKRIL 385
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 38/46 (82%)
Query: 891 FFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
FF+ +TTLR+DV TDGRH+EV FT +WKLDA RRDLTVNSMFL
Sbjct: 223 FFQENFEVTTLRVDVVTDGRHSEVVFTNNWKLDAERRDLTVNSMFL 268
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 807 NNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEINMFPHLGTDE- 865
+ H E+VL I N +GL ISGER +EL +IL + ++ +M + +F HLG E
Sbjct: 352 DKHDEDVLKIIASNANGLSMISGERCLSELKRILLYPSTPFLLRRMADAGLFVHLGLPEN 411
Query: 866 -TFATLDF---EGLFRSMPIPFTLL 886
F LD +G+ S P P T L
Sbjct: 412 PNFKELDIIWNKGILSSAPNPITCL 436
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEK 414
++ D+L+G PHDIDFATNATP QM MF+ V +++
Sbjct: 43 AVRDILLGISPHDIDFATNATPPQMHEMFSILYVENLDKR 82
>gi|340778370|ref|ZP_08698313.1| polynucleotide adenylyltransferase region [Acetobacter aceti NBRC
14818]
Length = 419
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ DR DG V+DYF G EDLK G FVGD +RI+ED LRILR+
Sbjct: 114 EDAARRDFTINAMSCDR----DGHVHDYFGGQEDLKAGQVRFVGDASTRIREDALRILRF 169
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF AR + + ++ L AI + ++ + +S ERIW+EL +IL G E L ++ Q
Sbjct: 170 FRFQARFGSGMPD--QDTLDAITHGIEMIDRLSVERIWSELRRILTGPRVTE-TLNLMNQ 226
Query: 748 NLLLFSKL 755
+L + L
Sbjct: 227 TGVLAACL 234
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D TDGRHA V +T+ W+ DA RRD T+N+M
Sbjct: 90 ITTLRRDDVTDGRHANVSWTQSWEEDAARRDFTINAM 126
>gi|358339873|dbj|GAA41396.2| tRNA nucleotidyltransferase (CCA-adding enzyme) [Clonorchis
sinensis]
Length = 531
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN--NPNNHKEEVLS 707
G VYD+F G DL + FVGD +RI+EDYLRILRYFRF R+ N + H + L
Sbjct: 231 GRVYDFFGGRGDLSRRHIRFVGDAATRIREDYLRILRYFRFHGRLANPDEQDLHDPDTLE 290
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
AI+ N GL I+GER W EL IL S M+L+ ++
Sbjct: 291 AIRENAAGLSKIAGERCWIELKNILSYP-STPMLLRRMF 328
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L+G P DID+AT+ATP +M MF E +RT N GE HGTV R+NDK NFE+
Sbjct: 91 AVRDVLLGITPKDIDYATDATPTEMNEMFLSENIRTLNRNGETHGTVTVRINDKINFEIT 150
Query: 435 PVK 437
++
Sbjct: 151 TLR 153
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 35/41 (85%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID DGRH +V FT+DW+LDA RRDLTVNSMFLG+
Sbjct: 149 ITTLRIDSEPDGRHTKVVFTDDWRLDAGRRDLTVNSMFLGL 189
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 140/358 (39%), Gaps = 64/358 (17%)
Query: 573 KLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGT------VTAKVLSYRNRREKEDRI 626
K+D F S + E L +F KHGY+LRIAG +T K + Y +
Sbjct: 57 KIDLTSFPSLYREENVILHKLFHKHGYELRIAGGAVRDVLLGITPKDIDYATDATPTEM- 115
Query: 627 GENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSR-----IQEDY 681
N+ F L+ +++ +R+ GTV N + + +P R +D+
Sbjct: 116 --NEMF--LSENIRTLNRNGETHGTVTVRINDKINFEITTLRIDSEPDGRHTKVVFTDDW 171
Query: 682 L-----RILRYFRFFARI--CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELN----K 730
R L F + P+NH E + N+ + H + ++ + LN +
Sbjct: 172 RLDAGRRDLTVNSMFLGLDFSTLPDNHVE---NTDPNDQEDTHGLDVQQPSSTLNSKTPQ 228
Query: 731 ILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVELMKYKEKSELIKDFHKWRLPTFPM 790
+ G + L + + F AT +RE + +++Y
Sbjct: 229 VFGRVYDFFGGRGDLSRRHIRFVGDAATRIREDYLRILRYF------------------- 269
Query: 791 NGNIIRQFFARICN--NPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEM 848
+F R+ N + H + L AI++N GL I+GER W EL IL + +
Sbjct: 270 ------RFHGRLANPDEQDLHDPDTLEAIRENAAGLSKIAGERCWIELKNILSYPSTPML 323
Query: 849 MLKMLEINMFPHLG--TDETFATLDF---EGLFRSMPIPFTLLFSANFFRNLARITTL 901
+ +M + +FPHLG D F LD G+ P T L A N+ I TL
Sbjct: 324 LRRMFDAGLFPHLGFPRDPNFTELDAAWQRGIINRTPCAATHL--AALLTNVEEIETL 379
>gi|320165181|gb|EFW42080.1| sulfite oxidase [Capsaspora owczarzaki ATCC 30864]
Length = 379
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 249 KVILSDHESTSHWQQNDYK---GFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLK 305
+ LSD ES +QQ+DYK GF + + V + + PAIQE+PV SAIC P K
Sbjct: 210 SITLSDCESDGMFQQHDYKLTPGFIDAETFKRV-WREYPAIQEMPVQSAICFPPNGYK-H 267
Query: 306 LENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTW-HVANFT-GQDSQAPLTRHWGWTLWRA 363
+ V+GYA SGGGK I RVD+++D G +W H A T G S AP W WTLW
Sbjct: 268 ASGTPLTVRGYAHSGGGKRITRVDLSVDGGNSWSHSAILTRGTSSDAPYAHDWSWTLWEV 327
Query: 364 TIP 366
+P
Sbjct: 328 AVP 330
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 420 TVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHV 479
VCA E + P+KG+ W A+GNA W+G +L +L+ AG+ +V+HV
Sbjct: 89 VVCAGNRRNEMSRISPIKGVGWDSGAIGNAVWSGVKLYRLLELAGV-------QQNVRHV 141
Query: 480 HVE 482
E
Sbjct: 142 LFE 144
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
++ +A D++ N+QP + +IWN RG+L+NA HRVRV
Sbjct: 336 CQLACRAWDAAGNSQPATVDSIWNFRGLLNNAQHRVRV 373
>gi|409402225|ref|ZP_11251818.1| polynucleotide adenylyltransferase [Acidocella sp. MX-AZ02]
gi|409129180|gb|EKM99046.1| polynucleotide adenylyltransferase [Acidocella sp. MX-AZ02]
Length = 383
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 66/116 (56%), Gaps = 6/116 (5%)
Query: 617 RNRREKEDRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSR 676
R R E D E+ R T++ ++ G ++DYF G DL GV FVGD +R
Sbjct: 92 RARVEFTDDWREDAARRDFTINAMSCTQA----GEIFDYFGGQADLAAGVVRFVGDAAAR 147
Query: 677 IQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
+ EDYLRILR+FRFFAR L+AI++ +GL +S ER+W+E+ KIL
Sbjct: 148 VAEDYLRILRFFRFFARYGR--READAAALAAIRDGREGLRQLSAERVWSEVKKIL 201
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 13/111 (11%)
Query: 832 IWTEL--NKILGGSFSKEMMLKML-EINMFPHLGTDETFATLDFEGLFRSMPIPF----- 883
+W L +++GG+ + + + +++M L +E GL +++P
Sbjct: 10 VWAALPEARMVGGAVRDMLAGRAVADVDMASPLAPEEVMRRARAAGL-KAVPTGLAHGTV 68
Query: 884 TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
TL+ + + F +TTLR DV TDGR A V+FT+DW+ DA RRD T+N+M
Sbjct: 69 TLVAAGHGFE----VTTLRRDVETDGRRARVEFTDDWREDAARRDFTINAM 115
>gi|294888413|ref|XP_002772453.1| Sulfite oxidase, putative [Perkinsus marinus ATCC 50983]
gi|239876679|gb|EER04269.1| Sulfite oxidase, putative [Perkinsus marinus ATCC 50983]
Length = 418
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Query: 3 DGVKALSKLRAGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EI 61
+GV+ GEP+ L Y ++ + H S++WV F+QGVYDITEFV HPGG +
Sbjct: 26 EGVEGKWHPHFGEPVDGLKTYKIAQVAEHNKEGSTVWVTFKQGVYDITEFVAKHPGGKDK 85
Query: 62 IMKAAGGSIEPFWAMYGVHLQ-DEVFELLESYRIGNISQEDSKLA 105
I+ AAGG+++ FW +Y HLQ E+ +LE RIGN+ E+ A
Sbjct: 86 ILMAAGGAVDEFWRLYRQHLQLPEISFMLEEMRIGNLDPEEYAQA 130
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V L ES S WQ+NDYK S + + + A+Q + VA + N
Sbjct: 244 RVCLELEESPSFWQKNDYKFLQVSFEHSEDNAEDAEALQMIRTSLYAKGEVAGSNPG--N 301
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH---WGWTLWRATI 365
+ YA+SGGG+ + VDV+ID G+TW A G P RH W W LW A I
Sbjct: 302 GILTRFMYAYSGGGRRVKEVDVSIDGGKTWSQAMMEGH----PEVRHDRNWSWVLWSAVI 357
Query: 366 PVDP 369
+ P
Sbjct: 358 SIPP 361
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+A D + NTQPE A IWN+RG+++N++H+V+V +
Sbjct: 380 RAFDDANNTQPERSATIWNVRGLVNNSWHKVKVRV 414
>gi|452978376|gb|EME78140.1| hypothetical protein MYCFIDRAFT_200455 [Pseudocercospora fijiensis
CIRAD86]
Length = 628
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 21/143 (14%)
Query: 25 LSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQDE 84
LS++ H + WV+ VYDIT+F+ HPGG++I++A G SI+P+W ++ +H + +
Sbjct: 148 LSEVVKHDKDSPTKWVIAASSVYDITDFIDSHPGGQVILRACGRSIDPYWELFSIHQKPQ 207
Query: 85 VFELLESYRIGNISQED----------------SKLAAKDIASDPYVMEPVRSPLLKATS 128
V ++L++Y IG I D A DI D +P R P L +
Sbjct: 208 VKQILDTYHIGEIDGRDLDADGNVNWTLLGNSIDASAVDDIFKD----DPDRDPELIVHT 263
Query: 129 LKPYNAEPPPSMLVENFLTPSLL 151
KP NAE P + L +F+TP L
Sbjct: 264 AKPCNAETPATFL-GHFITPLRL 285
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 18/124 (14%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPST---------DWDTVDFAKSPAIQELPVISAICLP 298
GK+ + ES+S+W DYK F P DWD +IQE+PV SAI
Sbjct: 461 GKISIGCEESSSNWHNRDYKCFGPDVKAPSQLKPEDWDAAQ-----SIQEMPVQSAIT-K 514
Query: 299 VADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGW 358
+A + E+ + V G+A+SGGG+ IVRVDV+ D G+TW A F D++ ++ W W
Sbjct: 515 IARRSDEAES-PVSVSGFAYSGGGRRIVRVDVSADGGKTWKQAKFCDDDAKG--SKRWTW 571
Query: 359 TLWR 362
TLW+
Sbjct: 572 TLWQ 575
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRV 516
+AVD SYNTQP +F WN RG+L NA+HRV
Sbjct: 594 RAVDESYNTQPPTFDGTWNFRGLLGNAWHRV 624
>gi|195343785|ref|XP_002038471.1| GM10595 [Drosophila sechellia]
gi|194133492|gb|EDW55008.1| GM10595 [Drosophila sechellia]
Length = 254
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 91/204 (44%), Gaps = 63/204 (30%)
Query: 553 LTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGT---- 608
L +PP R ++ P + KL +PEF S FTPEL L +F+K+ Y+LRIAG
Sbjct: 48 LGKPP-----RMRTNPAFR-KLATPEFQSIFTPELNDLLALFKKYDYELRIAGGAVRDIL 101
Query: 609 -----------VTAKVLSYRNRREKED----------------RIGENQPFRKLTLSVQ- 640
TA + EKE+ RI + + F TL +
Sbjct: 102 MGISPKDIDLATTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVTTLRIDI 161
Query: 641 -----------------DKDRS--------FRLDGTVYDYFNGHEDLKKGVCAFVGDPVS 675
D +R DGTVYD+F G++DL++ FVG+
Sbjct: 162 RTDGRHAEVMYTTDWQLDANRRDLTINSMFLGFDGTVYDFFYGYDDLQERRVVFVGEADI 221
Query: 676 RIQEDYLRILRYFRFFARICNNPN 699
RI+ED+LRILRYFRF+ RI + N
Sbjct: 222 RIKEDFLRILRYFRFYGRIASEEN 245
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+LMG P DID AT ATPDQMK MF +E+VR N GEKHGT+ R+NDKENFEV
Sbjct: 96 AVRDILMGISPKDIDLATTATPDQMKQMFEKEEVRMINANGEKHGTITPRINDKENFEVT 155
Query: 435 PVK 437
++
Sbjct: 156 TLR 158
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRID+ TDGRHAEV +T DW+LDANRRDLT+NSMFLG
Sbjct: 154 VTTLRIDIRTDGRHAEVMYTTDWQLDANRRDLTINSMFLGF 194
>gi|320170043|gb|EFW46942.1| tRNA nucleotidyl transferase [Capsaspora owczarzaki ATCC 30864]
Length = 516
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 612 KVLSYRNRREKEDRIGENQPFRKLTLSVQDKDRSFR-----LDGTVYDYFNGHEDLKKGV 666
+V + R + + R E + +L Q +D F +GTVYDYF G +DL+
Sbjct: 144 EVTTLRVDKITDGRHAEVEFTSDWSLDAQRRDLRFNSMSIDFNGTVYDYFGGVQDLQNNH 203
Query: 667 CAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEV----LSAIKNNLDGLHNISGE 722
AFVG RI+EDYLRILR+FRF+ R+C++ V L I N L IS E
Sbjct: 204 IAFVGTADLRIKEDYLRILRFFRFYGRMCDSLGQGNVSVEPGTLECIAENAPNLSGISAE 263
Query: 723 RIWTELNKIL---GGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVEL----MKYKEKSE 775
RIW E +KIL + E+M + N++ + L + I L M + +E
Sbjct: 264 RIWLECSKILQQRSCPHTLEVMTRCGVANIIGLADLHQSVASSEIRLLQQLEMAVRHTTE 323
Query: 776 L 776
L
Sbjct: 324 L 324
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR+D TDGRHAEV+FT DW LDA RRDL NSM
Sbjct: 145 VTTLRVDKITDGRHAEVEFTSDWSLDAQRRDLRFNSM 181
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTV 421
++ D+LM +P D+D AT A PD ++ MF E +R G KHGTV
Sbjct: 54 AVRDLLMNIQPKDVDLATEALPDVLQHMFEEAGIRVI-PTGLKHGTV 99
>gi|346972128|gb|EGY15580.1| sulfite oxidase [Verticillium dahliae VdLs.17]
Length = 604
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 111/267 (41%), Gaps = 49/267 (18%)
Query: 176 SDEKLKLVKVMAGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEP-PPSML 234
+D L + AG+ + A + ++PV P N P PP
Sbjct: 318 ADAGFPLAEARAGDTDARHVQFAGLESYGASIPIDPVLDPRGDVILAYAMNGAPLPPDHG 377
Query: 235 YSSLLRIPFCSHTG--------KVILSDHESTSHWQQNDYKGFSPST---DWDTVDFAKS 283
+ LR H +VI+S+ ES S WQQ DYK F P+ DW T +
Sbjct: 378 FP--LRALVPGHVAARSVKWLRRVIVSEDESQSQWQQKDYKLFGPNQTHPDWTT-----A 430
Query: 284 PAIQELPVISAICL----------PVADAKLKL-------ENHQMEVQGYAWSGGGKAIV 326
PAIQE+P+ SAI P+ +L + V GYA+SGGG+ IV
Sbjct: 431 PAIQEMPITSAITAVKLGPWTAVPPMKAPGGRLLTPPPEARGREAAVTGYAYSGGGRRIV 490
Query: 327 RVDVTIDQGRTWHVANF------TGQD--SQAPLTRHWGWTLWR--ATIPVDPKTKEVSI 376
RVDV++D GRTW A G D SQ + W W WR +P + +
Sbjct: 491 RVDVSLDNGRTWDQAKLLADTVKPGPDRASQDHGHKSWAWQRWRYDGVVPFGDGPEGGKV 550
Query: 377 MDMLMGKKPHDIDFATNATPDQMKAMF 403
L+ K D A NA PD +A++
Sbjct: 551 CSTLLVKA---TDEAYNAQPDGYEAIW 574
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 20/132 (15%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGV 79
LP + LS+++ H WV VYDIT+++ HPGG++I++AAGGSI+P+W ++ V
Sbjct: 115 LPRFRLSEVKEHGPDSERPWVTHEDKVYDITDWIGAHPGGDVILRAAGGSIDPYWNIFTV 174
Query: 80 HLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPS 139
H + ++ DP+ +P R L + KP NAE P
Sbjct: 175 H--------------------KAPYPPAELIEDPFRDDPARDQRLVIMTSKPRNAETPLD 214
Query: 140 MLVENFLTPSLL 151
L E F+TP L
Sbjct: 215 ELAETFVTPQEL 226
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D +YN QP+ + IWN RG L+NA+HR RV
Sbjct: 557 KATDEAYNAQPDGYEAIWNFRGNLTNAWHRYRV 589
>gi|224013991|ref|XP_002296659.1| hypothetical protein THAPSDRAFT_263844 [Thalassiosira pseudonana
CCMP1335]
gi|220968709|gb|EED87054.1| hypothetical protein THAPSDRAFT_263844 [Thalassiosira pseudonana
CCMP1335]
Length = 493
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 21 PWYSLSDIQNHKDLK--SSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMY 77
P +++S++ H S+W+ + VYD+T FV HPGG + IM AAGG+IEP W +Y
Sbjct: 1 PTFAMSEVAQHNGTADDGSVWMTYGGFVYDVTNFVANHPGGSDKIMLAAGGAIEPHWHVY 60
Query: 78 GVHLQDEV-FELLESYRIGNISQEDS---KLAAKDIAS---DPYVMEPVRSPLLKATSLK 130
H ++ L+E IG++ D A ++ S DPY EP RSPLL S
Sbjct: 61 RQHFASDLPLRLMEKMLIGHLHPTDQLQIDTAMDNLTSTTDDPYEHEPHRSPLLLVHSDT 120
Query: 131 PYNAEPPPSMLVENFLTP 148
P NAE P ++ + ++TP
Sbjct: 121 PMNAEVPSDIITKEYITP 138
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 235 YSSLLRIPFCSHTGKVILSDHESTSHWQQN-DYKGFSPST-DWDTVDFAKSPAIQELPVI 292
Y+++ + + S ++ LS+ E+ WQ+ +YK P+ D VD P + E+ V
Sbjct: 307 YAAVRNVKWVS---RLELSNEEAVGAWQRGLNYKVLPPAVVDAKNVDLDGMPGLGEVSVF 363
Query: 293 SAI--CLPVADAKLKL---ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQD 347
S I V D K+ E ++ G+AW+GGG+ IVRVD+T D G+TW AN T Q
Sbjct: 364 SGITDVERVGDEGKKMVPGETVLVKASGWAWAGGGRNIVRVDITGDNGKTWETANIT-QG 422
Query: 348 SQAPLTRHWGWTLWRA-TIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
S+ P R W W W IP VS+ G +D A N P+ ++
Sbjct: 423 SKQPYGRSWAWVFWETDAIPAKVCDDGVSVELSCKG-----VDMAFNTQPESSDGLW 474
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 479 VHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
V VE+ K VD ++NTQPES +WN+RG+ +N++ R+R ++
Sbjct: 450 VSVELSCKGVDMAFNTQPESSDGLWNVRGLANNSWFRLRHKV 491
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 420 TVCARMNDKENF-EVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQH 478
T+ N + F +++ G WG A+ A W GARLVDVL A Q + +A V
Sbjct: 190 TLQCSGNRRSGFNDLRRTSGTPWGQGAISTAKWGGARLVDVLMLAAEQQQQEVAAASVDD 249
Query: 479 VH 480
H
Sbjct: 250 DH 251
>gi|168045780|ref|XP_001775354.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673299|gb|EDQ59824.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 400
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENH 309
+++S E +QQ DYK F P DWD +D+ + + PV S IC P A +K
Sbjct: 231 IVVSKTECQGFFQQKDYKMFPPRVDWDNIDWQSRRPLMDFPVQSVICEPQDGAVVK-SGD 289
Query: 310 QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN------FTGQDSQAPLTRHWGWTLWR- 362
++ GYA +GGG+ I RVD+++D G+TW A+ DS P W WTLW
Sbjct: 290 LVDFYGYAVAGGGRGIERVDISVDNGKTWLEAHRLPKLQTNAYDSHRP---DWAWTLWEL 346
Query: 363 ATIPVD-PKTKEVSIMDMLMGKKPHDID 389
++ V+ P T V +D +P D+D
Sbjct: 347 KSVKVETPCTVIVKAVDTAANVQPADVD 374
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA E + V+G+ WG AA+G A W GA+L DVLK AG+ + + +HV +
Sbjct: 104 CAGNRRTEMSMRRKVRGVGWGAAAIGTAAWGGAKLSDVLKHAGVMYYSTATNQGGRHVEI 163
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 467 PDQSLDSADVQHVHVE----IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
PD + +++ V VE + KAVD++ N QP IWNLRGVL+ ++H++R+
Sbjct: 337 PDWAWTLWELKSVKVETPCTVIVKAVDTAANVQPADVDEIWNLRGVLNTSWHKIRI 392
>gi|262276836|ref|ZP_06054629.1| tRNA-nucleotidyltransferase 1 [alpha proteobacterium HIMB114]
gi|262223939|gb|EEY74398.1| tRNA-nucleotidyltransferase 1 [alpha proteobacterium HIMB114]
Length = 414
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 12/118 (10%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
LDG VYD F G +D+K G F+GDP RI+EDYLR LRYFRF I + ++H+E +L
Sbjct: 138 LDGRVYDPFKGVDDIKNGHIKFIGDPAKRIKEDYLRALRYFRF--HIQFSKHDHEEYILK 195
Query: 708 AIKNNLDGLHNISGERIWTELNKIL---------GGSFSKEMMLKMLYQNLLLFSKLK 756
I N D + N+S ER+ E++KIL +FSK++ L + Y+ + ++L+
Sbjct: 196 YISQNQDNIENLSKERLIDEMSKILISGLGYKLFSNNFSKDLFLSV-YKGIKYLTRLE 252
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+ TLR D DGRHA V FT+DW+ DA RRDLT+NS++ +
Sbjct: 98 VNTLRKDFNEDGRHASVMFTKDWRQDALRRDLTINSIYCDL 138
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
+ D+L GK+ DIDFAT+ P+Q+K + + T+++ EK+G++ +N+K FEV
Sbjct: 42 CVRDLLFGKELSDIDFATSLEPEQVKNKLNKSNI-TYDDTFEKYGSIKVFINNKF-FEVN 99
Query: 435 PVK 437
++
Sbjct: 100 TLR 102
>gi|258542072|ref|YP_003187505.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-01]
gi|384041993|ref|YP_005480737.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-12]
gi|384050508|ref|YP_005477571.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-03]
gi|384053618|ref|YP_005486712.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-07]
gi|384056850|ref|YP_005489517.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-22]
gi|384059491|ref|YP_005498619.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-26]
gi|384062785|ref|YP_005483427.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-32]
gi|384118861|ref|YP_005501485.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256633150|dbj|BAH99125.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-01]
gi|256636207|dbj|BAI02176.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-03]
gi|256639262|dbj|BAI05224.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-07]
gi|256642316|dbj|BAI08271.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-22]
gi|256645371|dbj|BAI11319.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-26]
gi|256648426|dbj|BAI14367.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-32]
gi|256651479|dbj|BAI17413.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654470|dbj|BAI20397.1| poly(A) polymerase [Acetobacter pasteurianus IFO 3283-12]
Length = 397
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ D + GTV+DYF+G DL G FVGD RIQED LRILR+
Sbjct: 113 EDAARRDFTINAMSCDST----GTVHDYFDGQHDLANGSVRFVGDATLRIQEDALRILRF 168
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF+ R + + + AI + L+ +S ERIW+EL +IL G + +++ M
Sbjct: 169 FRFWGRYGRGQAD--AQAMHAITTQAELLNGLSVERIWSELKRILAGPKALDVVYMMQQA 226
Query: 748 NLL 750
+L
Sbjct: 227 GIL 229
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 824 LHNISGERIWTEL--NKILGGSFSKEMMLKML-EINMFPHLGTDETFATLDFEGLFRSMP 880
LH + E+IW L +++GG+ M+ + + +I++ +E L +G+
Sbjct: 14 LHAL--EQIWAVLPEARLVGGAVRDLMVGRSIADIDLAVPQPPEEVMQRLKAQGM---TV 68
Query: 881 IPFTL---LFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+P L +A ITTLR DV TDGRHA V +T++W+ DA RRD T+N+M
Sbjct: 69 VPTGLAHGTVTAVIDSAPYEITTLRRDVETDGRHAVVCWTDNWQEDAARRDFTINAM 125
>gi|296537169|ref|ZP_06899104.1| possible tRNA adenylyltransferase, partial [Roseomonas cervicalis
ATCC 49957]
gi|296262504|gb|EFH09194.1| possible tRNA adenylyltransferase [Roseomonas cervicalis ATCC
49957]
Length = 264
Score = 87.0 bits (214), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S +G ++DYF G EDL G FVGDP +R+ EDYLR+LR+FRF AR +
Sbjct: 104 SMDAEGHIWDYFGGREDLAAGRVRFVGDPATRLAEDYLRVLRFFRFHARYGQGAP--EAV 161
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGG 734
L+A+++ + GL +S ER+W EL ++L G
Sbjct: 162 ALAALRDAVPGLQRLSAERVWMELKRLLEG 191
Score = 54.7 bits (130), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+T+LR D+ TDGRHAEV +T DW+ DA RRD T N++
Sbjct: 67 VTSLRRDLATDGRHAEVAWTTDWREDAARRDFTFNAL 103
>gi|76154248|gb|AAX25739.2| SJCHGC09232 protein [Schistosoma japonicum]
Length = 217
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L+G PHDIDFAT+ATP QM MF++E +R N GE HGTV AR+NDKENFEV
Sbjct: 84 AVRDILLGVSPHDIDFATDATPSQMCEMFSKEGIRMLNRNGESHGTVTARINDKENFEVT 143
Query: 435 PVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVEIWSKAVDSSYNT 494
++ +T +D + ++ + S D+ + ++ K +++S N
Sbjct: 144 TLRIDVVTDGRHSEVIFTNDWKLDA-ERRDLTVNSMFLSVDMHELFDDVNGKTIENSSNN 202
Query: 495 QPESFANIWN 504
+ + +W+
Sbjct: 203 RRKVKGYLWD 212
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDV TDGRH+EV FT DWKLDA RRDLTVNSMFL +
Sbjct: 142 VTTLRIDVVTDGRHSEVIFTNDWKLDAERRDLTVNSMFLSV 182
>gi|427431235|ref|ZP_18920815.1| tRNA nucleotidyltransferase [Caenispirillum salinarum AK4]
gi|425877887|gb|EKV26612.1| tRNA nucleotidyltransferase [Caenispirillum salinarum AK4]
Length = 451
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V+DYF+G DL V FVG P RI+EDYLRILR+FRF A + E L A
Sbjct: 163 DGAVFDYFDGLSDLAARVVRFVGRPHERIREDYLRILRFFRFHAHYGEGAA--QAEALRA 220
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ N GL ++SGER+ EL KIL ++++M + +L
Sbjct: 221 CRANAAGLDHLSGERVRDELLKILDAPDPARVLVEMRGETVL 262
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 30/37 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR DV TDGRHAEV FT D++ DA RRD T+N++
Sbjct: 122 VTTLRRDVKTDGRHAEVAFTTDFREDAARRDFTMNAL 158
>gi|339320176|ref|YP_004679871.1| polyApolymerase family protein [Candidatus Midichloria mitochondrii
IricVA]
gi|338226301|gb|AEI89185.1| polyApolymerase family protein [Candidatus Midichloria mitochondrii
IricVA]
Length = 400
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
+DGTV D+FNG EDLK F+G+ RI+ED+LRILRYFRF + I N + +++
Sbjct: 132 IDGTVMDFFNGIEDLKNKKIKFIGNAEQRIKEDFLRILRYFRFISYIGGNSIDEN-SLMA 190
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKE 739
AIK GL ISGERI TE+ K+L F+K+
Sbjct: 191 AIKLK-SGLEKISGERIKTEMFKLLSNPFAKK 221
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ T GR AEV+FT++W DA RRD TVN+M+
Sbjct: 92 ITTLRKDIKTYGRKAEVEFTDEWLEDAKRRDFTVNAMY 129
>gi|380473913|emb|CCF46055.1| sulfite oxidase, partial [Colletotrichum higginsianum]
Length = 136
Score = 86.3 bits (212), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 21 PWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVH 80
P Y LS+I+ H W++++ VYDIT++V HPGG+II++A GG++EP+W ++ +H
Sbjct: 24 PQYRLSEIKLHDGTSERPWIIYKTSVYDITDWVAAHPGGDIILRATGGAVEPYWDIFSIH 83
Query: 81 LQ--DEVFELLESYRIGNISQEDSKL 104
Q D V +LE Y+IG + D L
Sbjct: 84 RQQIDSVLAILEGYKIGEVDAADLSL 109
>gi|89257529|gb|ABD65019.1| Sulfite oxidase, putative [Brassica oleracea]
Length = 404
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 16/154 (10%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQ 314
E + Q DYK F PS +WD +D++ + PV SAIC + D ++ ++ ++ ++
Sbjct: 240 EECQGFFMQKDYKMFPPSVNWDNIDWSSRRPQMDFPVQSAIC-SLEDVQM-VKPGKVSIK 297
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH-----WGWTLWRATIPVDP 369
GYA SGGG+ I RVD+++D G++W A+ T + + ++ H W W L+ ATI V
Sbjct: 298 GYAVSGGGRGIERVDISMDGGKSWVEASRTQKPGKDYISEHNSSDKWAWVLFEATIDVSQ 357
Query: 370 KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T EV + K +D A N P+ +++++
Sbjct: 358 STTEV------IAKA---VDSAANVQPENVESVW 382
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 475 DVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
DV E+ +KAVDS+ N QPE+ ++WNLRGVL+ ++HRV + +
Sbjct: 354 DVSQSTTEVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRVLLRL 399
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA +V+ V+G+ W +A+GNA W GA+L DVL+ GI S +HV
Sbjct: 108 CAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELLGIPKLTSSTGLGGRHVE 166
>gi|329114174|ref|ZP_08242936.1| CCA-adding enzyme [Acetobacter pomorum DM001]
gi|326696250|gb|EGE47929.1| CCA-adding enzyme [Acetobacter pomorum DM001]
Length = 413
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ D + G V+DYF G +DL +G FVGD RIQED LRILR+
Sbjct: 129 EDAARRDFTINAMSCDST----GAVHDYFGGQQDLAEGTVRFVGDATLRIQEDALRILRF 184
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF+ R + + AI L+ +S ER+W+EL +IL G +++++ M
Sbjct: 185 FRFWGRY--GQGRADAQAMQAITAQAALLNGLSVERVWSELKRILAGPKAQDVVYLMQQA 242
Query: 748 NLL 750
+L
Sbjct: 243 GIL 245
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 30/37 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV TDGRHA V +T++W+ DA RRD T+N+M
Sbjct: 105 ITTLRRDVETDGRHAVVCWTDNWQEDAARRDFTINAM 141
>gi|302787993|ref|XP_002975766.1| hypothetical protein SELMODRAFT_103385 [Selaginella moellendorffii]
gi|300156767|gb|EFJ23395.1| hypothetical protein SELMODRAFT_103385 [Selaginella moellendorffii]
Length = 404
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
KVI + E + Q DYK F P+ DWD +++ + + PV AIC P A+ L
Sbjct: 233 KVI--EEECQGFFMQKDYKMFPPTVDWDNINWNSRRPLMDFPVQCAICSP-AEGDLVKAG 289
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQ-----APLTRHWGWTLWRA 363
+M++QGYA SGGG+ I RVDV++D G+TW A D + + + W LW
Sbjct: 290 SKMKIQGYAVSGGGRGIERVDVSVDGGKTWQEAQRFQDDKEYIADNPEKCKRFAWVLWEL 349
Query: 364 TI 365
T+
Sbjct: 350 TV 351
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA +V+ VKG+ W +A+GNA W GARL DVL+ AG+ + S + V V
Sbjct: 110 CAGNRRTAMSKVRKVKGVGWAISALGNAVWGGARLHDVLELAGVRQESSKRHVEFSSVDV 169
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 493 NTQPESFANIWNLRGVLSNAYHRVRVEI 520
N QPE ++IWNLRGVL+ ++HRV++ +
Sbjct: 370 NIQPEDVSSIWNLRGVLNTSWHRVKLNV 397
>gi|345486841|ref|XP_003425567.1| PREDICTED: probable sulfite oxidase, mitochondrial-like [Nasonia
vitripennis]
Length = 369
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGE-IIMKAAGGSIEPFWAMYG 78
LP Y++ +I +D + IW + +GVYD+T++ ++HPGGE +I AAGGS+EPF+ YG
Sbjct: 88 LPNYTIKEIHERRD-QGYIWSTYGRGVYDLTQYAKIHPGGEEMIAMAAGGSLEPFFIEYG 146
Query: 79 VHLQDEVFELLESYRIGNI 97
H ++FELLE+ R+GN+
Sbjct: 147 FHRTPKIFELLEATRVGNL 165
>gi|339021976|ref|ZP_08645953.1| poly(A) polymerase [Acetobacter tropicalis NBRC 101654]
gi|338751008|dbj|GAA09257.1| poly(A) polymerase [Acetobacter tropicalis NBRC 101654]
Length = 410
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ + R DG ++DYF G DL +G+ FVGD +RI+ED LRILR+
Sbjct: 112 EDAARRDFTINAMSRSR----DGALHDYFGGQADLAQGLVRFVGDAGTRIEEDALRILRF 167
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF R + E + AI + + +S ER+W+EL +IL G + + M
Sbjct: 168 FRFQGRYGTGEPD--AEAMRAITQRVGLITRLSVERVWSELQRILTGPNAATQVAMMAEA 225
Query: 748 NLL 750
+L
Sbjct: 226 GVL 228
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ TDGRHA V +T DW+ DA RRD T+N+M
Sbjct: 88 ITTLRRDMETDGRHAVVCWTTDWREDAARRDFTINAM 124
>gi|15232230|ref|NP_186840.1| sulfite oxidase [Arabidopsis thaliana]
gi|62901056|sp|Q9S850.1|SUOX_ARATH RecName: Full=Sulfite oxidase; AltName: Full=Moco-containing
protein AtMCP; Short=At-SO; Short=AtSOX
gi|38492612|pdb|1OGP|A Chain A, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
gi|38492613|pdb|1OGP|B Chain B, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
gi|38492614|pdb|1OGP|C Chain C, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
gi|38492615|pdb|1OGP|D Chain D, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
gi|38492616|pdb|1OGP|E Chain E, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
gi|38492617|pdb|1OGP|F Chain F, The Crystal Structure Of Plant Sulfite Oxidase Provides
Insight Into Sulfite Oxidation In Plants And Animals
gi|6091746|gb|AAF03458.1|AC010797_34 putative sulfite oxidase [Arabidopsis thaliana]
gi|6513940|gb|AAF14844.1|AC011664_26 sulfite oxidase (SOX) [Arabidopsis thaliana]
gi|13430670|gb|AAK25957.1|AF360247_1 putative sulfite oxidase [Arabidopsis thaliana]
gi|22136906|gb|AAM91797.1| putative sulfite oxidase [Arabidopsis thaliana]
gi|22759582|dbj|BAC10904.1| Moco containing protein [Arabidopsis thaliana]
gi|110741006|dbj|BAE98597.1| sulfite oxidase [Arabidopsis thaliana]
gi|332640211|gb|AEE73732.1| sulfite oxidase [Arabidopsis thaliana]
Length = 393
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQ 314
ES + Q DYK F PS +WD ++++ + PV SAIC V D ++ ++ ++ ++
Sbjct: 230 EESQGFFMQKDYKMFPPSVNWDNINWSSRRPQMDFPVQSAIC-SVEDVQM-VKPGKVSIK 287
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH-----WGWTLWRATIPVDP 369
GYA SGGG+ I RVD+++D G+ W A+ T + + ++ H W W L+ ATI V
Sbjct: 288 GYAVSGGGRGIERVDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQ 347
Query: 370 KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T+ ++ +D A N P+ +++++
Sbjct: 348 TTEVIA----------KAVDSAANVQPENVESVW 371
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRV 516
E+ +KAVDS+ N QPE+ ++WNLRGVL+ ++HRV
Sbjct: 350 EVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRV 384
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA +V+ V+G+ W +A+GNA W GA+L DVL+ GI + + +HV
Sbjct: 98 CAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVE 156
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 114 YVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTP 148
Y EP R P LK + +P+NAEPP S LV +++TP
Sbjct: 10 YSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTP 44
>gi|421851572|ref|ZP_16284265.1| poly(A) polymerase [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
gi|371480075|dbj|GAB29468.1| poly(A) polymerase [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
Length = 397
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ D + GTV+DYF G DL G FVGD RIQED LRILR+
Sbjct: 113 EDAARRDFTINAMSCDST----GTVHDYFGGQHDLANGSVRFVGDATLRIQEDALRILRF 168
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF+ R + + + AI + L+ +S ERIW+EL +IL G +++ M
Sbjct: 169 FRFWGRYGRGQAD--AQAMHAITTQAELLNGLSVERIWSELKRILAGPKVLDVVYLMQQA 226
Query: 748 NLL 750
+L
Sbjct: 227 GIL 229
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 30/37 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV TDGRHA V +T++W+ DA RRD T+N+M
Sbjct: 89 ITTLRRDVETDGRHAVVCWTDNWQEDAARRDFTINAM 125
>gi|421848657|ref|ZP_16281644.1| poly(A) polymerase [Acetobacter pasteurianus NBRC 101655]
gi|371460537|dbj|GAB26847.1| poly(A) polymerase [Acetobacter pasteurianus NBRC 101655]
Length = 397
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ D + GTV+DYF G DL G FVGD RIQED LRILR+
Sbjct: 113 EDAARRDFTINAMSCDST----GTVHDYFGGQHDLANGSVRFVGDATLRIQEDALRILRF 168
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
FRF+ R + + + AI + L+ +S ERIW+EL +IL G
Sbjct: 169 FRFWGRYGRGQAD--AQAMHAITTQAELLNGLSVERIWSELKRILAG 213
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 824 LHNISGERIWTEL--NKILGGSFSKEMMLKML-EINMFPHLGTDETFATLDFEGLFRSMP 880
LH + E+IW L +++GG+ M+ + + +I++ +E L +G+
Sbjct: 14 LHAL--EQIWAVLPDARLVGGAVRDLMVGRSIADIDLAVPQPPEEVMQRLKAQGM---TV 68
Query: 881 IPFTL---LFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+P L +A ITTLR DV TDGRHA V +T++W+ DA RRD T+N+M
Sbjct: 69 VPTGLAHGTVTAVIDSAPYEITTLRRDVETDGRHAVVCWTDNWQEDAARRDFTINAM 125
>gi|254456611|ref|ZP_05070040.1| poly(A) Polymerase [Candidatus Pelagibacter sp. HTCC7211]
gi|207083613|gb|EDZ61039.1| poly(A) Polymerase [Candidatus Pelagibacter sp. HTCC7211]
Length = 424
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 13/120 (10%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G ++D NG +DL++G+ F+GD +RI+EDYLRILRY RFF N+ H+ E++
Sbjct: 150 NGNLFDPNNGKKDLEEGLINFIGDTENRIKEDYLRILRYVRFFINYSNHK--HRPEIIKI 207
Query: 709 IKNNLDGLHNISGERIWTELNKILGGS-----FSKEMMLKMLY------QNLLLFSKLKA 757
IK N+DG+ +S ER+ E KI F ++ L++LY +NL F KL +
Sbjct: 208 IKRNIDGISKLSSERLLDEFKKITNSKNFLKLFEDDLSLELLYLIFPQFKNLENFKKLNS 267
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
IT+LR D+ TDGRHA+++F+ DWK DA RRD ++NS++
Sbjct: 109 ITSLRKDILTDGRHAKIEFSSDWKEDAERRDFSINSIY 146
Score = 43.1 bits (100), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 799 FARICNNPNNHKE--EVLSAIKKNLDGLHNISGERIWTELNKILGGS-----FSKEMMLK 851
+ R N +NHK E++ IK+N+DG+ +S ER+ E KI F ++ L+
Sbjct: 188 YVRFFINYSNHKHRPEIIKIIKRNIDGISKLSSERLLDEFKKITNSKNFLKLFEDDLSLE 247
Query: 852 MLEINMFPHLGTDETFATLDFEGLFRSMPIPFTLLFS 888
+L + +FP E F L+ I F L S
Sbjct: 248 LLYL-IFPQFKNLENFKKLNSYAKNNIFNIDFIFLLS 283
>gi|79295451|ref|NP_001030620.1| sulfite oxidase [Arabidopsis thaliana]
gi|332640212|gb|AEE73733.1| sulfite oxidase [Arabidopsis thaliana]
Length = 298
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQ 314
ES + Q DYK F PS +WD ++++ + PV SAIC V D ++ ++ ++ ++
Sbjct: 135 EESQGFFMQKDYKMFPPSVNWDNINWSSRRPQMDFPVQSAIC-SVEDVQM-VKPGKVSIK 192
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH-----WGWTLWRATIPVDP 369
GYA SGGG+ I RVD+++D G+ W A+ T + + ++ H W W L+ ATI V
Sbjct: 193 GYAVSGGGRGIERVDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQ 252
Query: 370 KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T+ ++ +D A N P+ +++++
Sbjct: 253 TTEVIA----------KAVDSAANVQPENVESVW 276
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRV 516
E+ +KAVDS+ N QPE+ ++WNLRGVL+ ++HRV
Sbjct: 255 EVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRV 289
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI---SPDQSLDSADVQH 478
CA +V+ V+G+ W +A+GNA W GA+L DVL+ GI + +L + V+
Sbjct: 3 CAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEF 62
Query: 479 VHVE 482
V V+
Sbjct: 63 VSVD 66
>gi|297828558|ref|XP_002882161.1| hypothetical protein ARALYDRAFT_896052 [Arabidopsis lyrata subsp.
lyrata]
gi|297328001|gb|EFH58420.1| hypothetical protein ARALYDRAFT_896052 [Arabidopsis lyrata subsp.
lyrata]
Length = 393
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 17/153 (11%)
Query: 256 ESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQG 315
ES + Q DYK F PS +WD ++++ + PV SAIC V D ++ ++ ++ ++G
Sbjct: 231 ESQGFFMQKDYKMFPPSVNWDNINWSSRRPQMDFPVQSAIC-SVEDVQM-VKPGKVSIKG 288
Query: 316 YAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH-----WGWTLWRATIPVDPK 370
YA SGGG+ I RVD+++D G+ W A+ T + + ++ H W W L+ ATI V
Sbjct: 289 YAVSGGGRGIERVDISLDGGKNWVEASRTQKPGKHYISEHNSSDKWAWVLFEATIDVSQT 348
Query: 371 TKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T+ ++ +D A N P+ +++++
Sbjct: 349 TEVIA----------KAVDSAANVQPENVESVW 371
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 31/39 (79%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
E+ +KAVDS+ N QPE+ ++WNLRG+L+ ++HRV + +
Sbjct: 350 EVIAKAVDSAANVQPENVESVWNLRGILNTSWHRVLLRL 388
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
CA +V+ V+G+ W +A+GNA W GA+L DVL+ GI
Sbjct: 98 CAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGI 141
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 114 YVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTP 148
Y EP R P LK + +P+NAEPP S LV +++TP
Sbjct: 10 YSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTP 44
>gi|145331724|ref|NP_001078089.1| sulfite oxidase [Arabidopsis thaliana]
gi|332640213|gb|AEE73734.1| sulfite oxidase [Arabidopsis thaliana]
Length = 241
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQ 314
ES + Q DYK F PS +WD ++++ + PV SAIC V D ++ ++ ++ ++
Sbjct: 78 EESQGFFMQKDYKMFPPSVNWDNINWSSRRPQMDFPVQSAIC-SVEDVQM-VKPGKVSIK 135
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH-----WGWTLWRATIPVDP 369
GYA SGGG+ I RVD+++D G+ W A+ T + + ++ H W W L+ ATI V
Sbjct: 136 GYAVSGGGRGIERVDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQ 195
Query: 370 KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T+ ++ +D A N P+ +++++
Sbjct: 196 TTEVIA----------KAVDSAANVQPENVESVW 219
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRV 516
E+ +KAVDS+ N QPE+ ++WNLRGVL+ ++HRV
Sbjct: 198 EVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRV 232
>gi|254796995|ref|YP_003081832.1| poly A polymerase family protein [Neorickettsia risticii str.
Illinois]
gi|254590230|gb|ACT69592.1| poly A polymerase family protein [Neorickettsia risticii str.
Illinois]
Length = 392
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 25/151 (16%)
Query: 640 QDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
Q +D +F ++G +YDYF+G EDL+ FVG+P RI+EDYLRILR FRF A I
Sbjct: 114 QRRDFTFNAMYMDIEGNIYDYFSGLEDLQNRRLKFVGEPHQRIEEDYLRILRAFRFQASI 173
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL--LF 752
C P + EE+L A + ++SGERI E+ K+L Y N L +F
Sbjct: 174 CKTPLS--EEILHACTKYRKKISSLSGERIQGEMFKLLS------------YVNFLSTVF 219
Query: 753 SKLKATTMREYIVELMKYK----EKSELIKD 779
+ +A + E + + + EKS LI+D
Sbjct: 220 TMQEAKIIDEVLGAKVSFSGLDYEKSRLIQD 250
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 15/110 (13%)
Query: 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIP-------FTLLFSA 889
+ +GG +++ K+ +I++ L ++ L GL + IP FT+L ++
Sbjct: 26 RFVGGCVRDQLLGRKISDIDLATTLKPEKAIRALKINGL---VTIPTGLKHGTFTVLVNS 82
Query: 890 NFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
ITTLR D+ DGRHA V FT+ WK DA RRD T N+M++ ++
Sbjct: 83 RAIE----ITTLRQDLQCDGRHATVSFTDSWKKDAQRRDFTFNAMYMDIE 128
>gi|397644422|gb|EJK76389.1| hypothetical protein THAOC_01850 [Thalassiosira oceanica]
Length = 266
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 20 LPWYSLSDIQNH--KDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAM 76
LP Y+ ++ H K L+S IW+ + +YD+T+FV HPGG E IM AAGG IEP W +
Sbjct: 99 LPIYTSDEVAKHDGKTLQS-IWMSYGGNIYDVTDFVANHPGGSEKIMLAAGGCIEPHWHL 157
Query: 77 YGVHLQDEV-FELLESYRIGNI---SQEDSKLAAKDIA---SDPYVMEPVRSPLLKATSL 129
Y H + +L+E IG++ QE L + +A +DPY EP R+ L
Sbjct: 158 YRQHFASNLPQQLMEKMIIGHLHPTDQEKVDLQMEKLADETADPYENEPTRNAKLIVHGD 217
Query: 130 KPYNAEPPPSMLVENFLTP 148
P NAE P ++ ++++TP
Sbjct: 218 TPMNAEVPRDVITQSYITP 236
>gi|239619162|gb|ACR84119.1| sulfite oxidase [Zea mays subsp. mays]
gi|414869647|tpg|DAA48204.1| TPA: sulfite oxidase [Zea mays]
Length = 397
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 252 LSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQM 311
+ + E + Q DYK F P+ DWD ++++ + PV SAIC + D + ++ Q
Sbjct: 227 VKEEECQGFFMQKDYKMFPPTVDWDNINWSTRRPQMDFPVQSAICT-LEDVDV-IKEGQA 284
Query: 312 EVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQD-----SQAPLTRHWGWTLWRATIP 366
+ GYA SGGG+ I RVDV+ D G+TW A +D S P + W W L+ AT+
Sbjct: 285 RIAGYALSGGGRGIERVDVSADGGKTWVEARRYQKDNVAYVSDGPQSDKWAWVLFEATLD 344
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
V P E+ + +D A N P++++ ++
Sbjct: 345 V-PANPEIVV---------KAVDSAANVQPEKVEDIW 371
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVE 519
EI KAVDS+ N QPE +IWNLRG+L+ ++HR++++
Sbjct: 350 EIVVKAVDSAANVQPEKVEDIWNLRGILNTSWHRIKIQ 387
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA V+ V+G+ W +A+G ATW GA+L DVL+ GI S+ S +HV
Sbjct: 98 CAGNRRTAMSNVRKVRGVGWDISALGTATWGGAKLSDVLELVGIPKLSSVTSLGGKHVE 156
>gi|397639508|gb|EJK73610.1| hypothetical protein THAOC_04756 [Thalassiosira oceanica]
Length = 608
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPS-------TDWDTVDFAKSPAIQELPVISAICLPVAD 301
K+ LSD ES + Q Y GFSP ++W ++P IQE PV S IC P +
Sbjct: 420 KIKLSDKESDKSYHQKSYLGFSPDITFENALSEWPPKRLDQAPIIQEQPVTSFICNPPQN 479
Query: 302 AKLKLENH-QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTL 360
A + ++ +G +WSGGG+ I RVDV++D G +W A Q HW WT
Sbjct: 480 AVVGVKGATDFTFKGVSWSGGGRKIERVDVSMDGGESWTAAELYKPIEQT-YNHHWAWTQ 538
Query: 361 WRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNA 394
+ T+P+ ++ + G+K DID + A
Sbjct: 539 FSKTLPIPDDVRK----KLARGEKV-DIDITSKA 567
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEI-IMKAAGGSIEPFWAMYG 78
LP L ++Q H D + S+W FR GVYD+T F+ HPGG ++ +AG +EP+W +Y
Sbjct: 114 LPTIPLEEVQEHND-EDSLWYTFRGGVYDLTSFINGHPGGTPRLLMSAGQDLEPYWEVYR 172
Query: 79 VHLQDEVFELLESYRIGNISQEDSKLAAKD 108
H + V E +E++RIG +S ED+K ++
Sbjct: 173 QHFRGHVLEWIETHRIGTLSPEDAKRKKRE 202
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 447 GNATWTGARLVDVL--------------KAAGISPDQSLDSADVQHVHVEIWSKAVDSSY 492
G +WT A L + K I D A + V ++I SKA+DS +
Sbjct: 513 GGESWTAAELYKPIEQTYNHHWAWTQFSKTLPIPDDVRKKLARGEKVDIDITSKALDSGF 572
Query: 493 NTQPESFANIWNLRGVLSNAYHRVRVEI 520
N QP WN RG+ N ++ V+V +
Sbjct: 573 NVQPSEMPPYWNARGIAINHWYHVKVTL 600
>gi|414088345|ref|YP_006988523.1| putative tRNA nucleotidyl transferase [Caulobacter phage
CcrColossus]
gi|408731715|gb|AFU88159.1| putative tRNA nucleotidyl transferase [Caulobacter phage
CcrColossus]
Length = 384
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DG + D + G EDL G FVG ++RIQEDYLR+LR+ RF AR + +EV++
Sbjct: 129 FDGDLVDPYGGREDLAAGRTRFVGSALARIQEDYLRLLRFVRFHARF-SGLAPFDDEVMA 187
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A+ + + GL +S ERIW+EL KI G + M +M +L
Sbjct: 188 ALPHVVGGLRMLSKERIWSELKKIAVGPHAPAMFARMSATGIL 230
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR+DV TDGR A V +T DW D RRDLT N++ L
Sbjct: 89 ITTLRLDVATDGRRAAVAYTRDWIADLLRRDLTYNAIEL 127
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 811 EEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEINMFPHLGTDETFATL 870
+EV++A+ + GL +S ERIW+EL KI G + M +M + + G
Sbjct: 183 DEVMAALPHVVGGLRMLSKERIWSELKKIAVGPHAPAMFARMSATGILQNAGLPPLVHLW 242
Query: 871 DFEGLFRSMPIPFTLL 886
FE +R P TL+
Sbjct: 243 AFEDAYRYTQNPITLM 258
>gi|162149125|ref|YP_001603586.1| tRNA nucleotidyltransferase [Gluconacetobacter diazotrophicus PAl
5]
gi|161787702|emb|CAP57298.1| putative tRNA nucleotidyltransferase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 427
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ R DG V+D F G DL+ G FVGDP +RI+ED LR+LR+
Sbjct: 130 EDAARRDFTINAMSCGR----DGVVHDAFGGRADLEAGHVRFVGDPATRIREDALRVLRF 185
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF AR + A L +S ER+W+EL +IL G E + M
Sbjct: 186 FRFHARYGQGTPDAAAMAAIADAAAAGALSRLSAERVWSELRRILSGPAVMESLGLMERT 245
Query: 748 NLL 750
+L
Sbjct: 246 GVL 248
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 29/40 (72%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
ITTLR D TDGRHA V +T+DW DA RRD T+N+M G
Sbjct: 106 ITTLRRDERTDGRHAVVAWTDDWAEDAARRDFTINAMSCG 145
>gi|209545131|ref|YP_002277360.1| polynucleotide adenylyltransferase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532808|gb|ACI52745.1| Polynucleotide adenylyltransferase region [Gluconacetobacter
diazotrophicus PAl 5]
Length = 420
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ R DG V+D F G DL+ G FVGDP +RI+ED LR+LR+
Sbjct: 123 EDAARRDFTINAMSCGR----DGVVHDAFGGRADLEAGHVRFVGDPATRIREDALRVLRF 178
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF AR + A L +S ER+W+EL +IL G E + M
Sbjct: 179 FRFHARYGQGTPDAAAMAAIADAAAAGALSRLSAERVWSELRRILSGPAVMESLGLMERT 238
Query: 748 NLL 750
+L
Sbjct: 239 GVL 241
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 29/40 (72%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
ITTLR D TDGRHA V +T+DW DA RRD T+N+M G
Sbjct: 99 ITTLRRDERTDGRHAVVAWTDDWAEDAARRDFTINAMSCG 138
>gi|6468008|gb|AAF13276.1|AF200972_1 sulfite oxidase [Arabidopsis thaliana]
Length = 393
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 17/153 (11%)
Query: 256 ESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQG 315
ES + Q DYK F PS +W ++++ + PV SAIC V D ++ ++ ++ ++G
Sbjct: 231 ESQGFFMQKDYKMFPPSVNWHNINWSSRRPQMDFPVQSAIC-SVEDVQM-VKPGKVSIKG 288
Query: 316 YAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH-----WGWTLWRATIPVDPK 370
YA SGGG+ I RVD+++D G+ W A+ T + + ++ H W W L+ ATI V
Sbjct: 289 YAVSGGGRGIERVDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQT 348
Query: 371 TKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T+ ++ +D A N P+ +++++
Sbjct: 349 TEVIA----------KAVDSAANVQPENVESVW 371
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRV 516
E+ +KAVDS+ N QPE+ ++WNLRGVL+ ++HRV
Sbjct: 350 EVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRV 384
Score = 43.1 bits (100), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHV 479
CA +V+ V+G+ W +A+GNA W GA+L DVL+ GI + + +HV
Sbjct: 98 CAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHV 155
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 114 YVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTP 148
Y EP R P LK + +P+NAEPP S LV +++TP
Sbjct: 10 YSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTP 44
>gi|226508778|ref|NP_001150663.1| LOC100284296 [Zea mays]
gi|195640922|gb|ACG39929.1| sulfite oxidase [Zea mays]
Length = 397
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 17/157 (10%)
Query: 252 LSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQM 311
+ + E + Q DYK F P+ DWD ++++ + PV SAIC + D + ++ Q
Sbjct: 227 VKEEECQGFFMQKDYKMFPPTVDWDNINWSTRRPQMDFPVQSAICT-LEDVDV-IKEGQA 284
Query: 312 EVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQD-----SQAPLTRHWGWTLWRATIP 366
+ GYA SGGG+ I RVDV+ D G+TW A +D S P + W W L+ T+
Sbjct: 285 RIAGYALSGGGRGIERVDVSADGGKTWVEARRYQKDNVAYVSDGPQSDKWAWVLFEXTLD 344
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
V P E+ + +D A N P++++ ++
Sbjct: 345 V-PANPEIVV---------KAVDSAANVQPEKVEDIW 371
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVE 519
EI KAVDS+ N QPE +IWNLRG+L+ ++HR++++
Sbjct: 350 EIVVKAVDSAANVQPEKVEDIWNLRGILNTSWHRIKIQ 387
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA V+ V+G+ W +A+G ATW GA+L DVL+ GI S+ S +HV
Sbjct: 98 CAGNRRTAMSNVRKVRGVGWDISALGTATWGGAKLSDVLELVGIPKLSSVTSLGGKHVE 156
>gi|302783885|ref|XP_002973715.1| hypothetical protein SELMODRAFT_149167 [Selaginella moellendorffii]
gi|300158753|gb|EFJ25375.1| hypothetical protein SELMODRAFT_149167 [Selaginella moellendorffii]
Length = 392
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
KVI + E + Q D+K F P+ DWD +++ + + PV IC P A+ L
Sbjct: 221 KVI--EEECQGFFMQKDFKMFPPTVDWDNINWNSRRPLMDFPVQCPICSP-AEGDLVKAG 277
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQ-----APLTRHWGWTLWRA 363
+M++QGYA SGGG+ I RVDV++D G+TW A D + + + W LW
Sbjct: 278 SKMKIQGYAVSGGGRGIERVDVSVDGGKTWQEAQRFQDDKEYIADNPEKCKRFAWVLWEL 337
Query: 364 TI 365
T+
Sbjct: 338 TV 339
Score = 46.2 bits (108), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA +V+ VKG+ W +A+GNA W GARL DVL+ AG+ + S + V V
Sbjct: 98 CAGNRRTAMSKVRKVKGVGWAISALGNAVWGGARLHDVLELAGVRQESSKRHVEFSSVDV 157
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 493 NTQPESFANIWNLRGVLSNAYHRVRVEI 520
N QPE ++IWNLRGVL+ ++HRVR+ +
Sbjct: 358 NIQPEDVSSIWNLRGVLNTSWHRVRLNV 385
>gi|88608101|ref|YP_506524.1| polyA polymerase family protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600270|gb|ABD45738.1| polyA polymerase family protein [Neorickettsia sennetsu str.
Miyayama]
Length = 392
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 20/138 (14%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
++G ++DYF+G EDL+ FVG+P RI+EDYLRILR FRF A IC P + EE+L
Sbjct: 127 IEGNIHDYFSGLEDLQNRRLKFVGEPHQRIEEDYLRILRAFRFQASICKTPLS--EEILH 184
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL--LFSKLKATTMREYIV 765
A + ++SGERI E+ K+L Y N L +F+ +A + E +
Sbjct: 185 ACTKYRKKISSLSGERIQGEMFKLLS------------YVNFLSTVFTMQEAKIIDEVLG 232
Query: 766 ELMKYK----EKSELIKD 779
+ + EKS LI+D
Sbjct: 233 AKVSFSGLDYEKSRLIQD 250
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPI-----PFTLLFSANF 891
+ +GG +++ K+ +I++ L +E L GL ++P FT+L ++
Sbjct: 26 RFVGGCVRDQLLGRKISDIDLATTLKPEEAIRALKTNGLV-TIPTGLKHGTFTVLVNSRP 84
Query: 892 FRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
ITTLR D+ DGRHA V FT+ WK DA RRD T N+M++ ++
Sbjct: 85 IE----ITTLRQDLHCDGRHATVSFTDSWKEDAQRRDFTFNAMYIDIE 128
>gi|354593466|ref|ZP_09011509.1| tRNA nucleotidyltransferase/poly A polymerase [Commensalibacter
intestini A911]
gi|353672577|gb|EHD14273.1| tRNA nucleotidyltransferase/poly A polymerase [Commensalibacter
intestini A911]
Length = 398
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ DR DG ++D++ G +DL G FVG+ RI+ED LR LR+
Sbjct: 109 EDAARRDFTMNAMFCDR----DGKIWDFYQGQQDLLSGTVRFVGNAKERIEEDVLRSLRF 164
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
FRF+AR P + E + AI+ L +S ER+W+E+ +IL G + ++ +M
Sbjct: 165 FRFYARYGKEPID--TEAVIAIQQTTYLLKTLSAERVWSEIQRILIGPMADGIVQQM 219
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ TDGRHA+V +T+DW+ DA RRD T+N+MF
Sbjct: 85 ITTLRKDIVTDGRHAQVVWTDDWQEDAARRDFTMNAMF 122
>gi|398829026|ref|ZP_10587226.1| tRNA nucleotidyltransferase/poly(A) polymerase [Phyllobacterium sp.
YR531]
gi|398217884|gb|EJN04401.1| tRNA nucleotidyltransferase/poly(A) polymerase [Phyllobacterium sp.
YR531]
Length = 423
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D G D++ F+GDP RI+EDYLRI+R+FRFFA + E L A
Sbjct: 136 DGTVLDLVGGIADIESQTLRFIGDPEQRIREDYLRIMRFFRFFA--WYGKGRPESEGLKA 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ERIW+EL K+L +L M +L
Sbjct: 194 CARLKDGLEQLSAERIWSELKKLLAAPDPSRALLWMRQAGVL 235
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
IT+LR DV T+GRHAEV F DW +DA RRD ++N+++
Sbjct: 95 ITSLRADVNTNGRHAEVAFGRDWLVDAQRRDFSINALY 132
>gi|196000873|ref|XP_002110304.1| hypothetical protein TRIADDRAFT_22538 [Trichoplax adhaerens]
gi|190586255|gb|EDV26308.1| hypothetical protein TRIADDRAFT_22538 [Trichoplax adhaerens]
Length = 377
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVD--FAKSPAIQELPVISAICLPVADAKLKLE 307
+++ EST+++Q+ DYK F P +WD VD + KSP IQEL V +AI P A +
Sbjct: 212 IVVQKEESTNYFQRRDYKLFLPQVNWDNVDQWWDKSPPIQELSVQAAILEPKNGAAID-T 270
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
++GYA S G + I RVDV++D G TW A + + R+W W LW T+
Sbjct: 271 GSPYAIKGYALSNGHR-IARVDVSLDNGVTWEPATTINGEIKDNTNRYWSWFLWTYTVRS 329
Query: 368 DPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P + D+A+N+ P +++
Sbjct: 330 MPSPCRIVC---------RAWDYASNSMPGDAPSIW 356
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 379 MLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKG 438
M+ G P I + + ++K+ F + +V +CA E ++K VKG
Sbjct: 60 MIGGDVPQPISLSLS----ELKSQFPKVQVMA--------TLMCAGNRRDELNKIKTVKG 107
Query: 439 LTWGHAAVGNATWTGARLVDVLKAAGI 465
+TWG AA+ N W G L VL AAGI
Sbjct: 108 VTWGPAAISNGIWGGVPLRLVLHAAGI 134
>gi|302409392|ref|XP_003002530.1| sulfite oxidase [Verticillium albo-atrum VaMs.102]
gi|261358563|gb|EEY20991.1| sulfite oxidase [Verticillium albo-atrum VaMs.102]
Length = 398
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 21 PWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVH 80
P + LS+++ H WV VYDIT+++ HPGG++I++AAGGSI+P+W ++ VH
Sbjct: 111 PRFRLSEVKEHGPDSERPWVTHEDKVYDITDWIGAHPGGDVILRAAGGSIDPYWNIFTVH 170
Query: 81 LQDEVFELLESYRIGNIS----------------------QEDSKLAAKDIASDPYVMEP 118
V E+L Y IG I D +L D + P + E
Sbjct: 171 KAPYVREILAQYMIGLIDVADLVDGQPPAELIEDPFRDDPTRDQRLTHPDWTTAPAIQEM 230
Query: 119 VRSPLLKATSLKPYNAEPPPSMLVENFLTPSLLSQVGSSTIT 160
+ + A L P+ PP LTP ++ + +T
Sbjct: 231 PITSAITAVKLGPWTTVPPMKAPGGRLLTPPPEARGREAAVT 272
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 69/152 (45%), Gaps = 30/152 (19%)
Query: 279 DFAKSPAIQELPVISAICL----------PVADAKLKL-------ENHQMEVQGYAWSGG 321
D+ +PAIQE+P+ SAI P+ +L + V GYA+SGG
Sbjct: 220 DWTTAPAIQEMPITSAITAVKLGPWTTVPPMKAPGGRLLTPPPEARGREAAVTGYAYSGG 279
Query: 322 GKAIVRVDVTIDQGRTWHVANF------TGQD--SQAPLTRHWGWTLWR--ATIPVDPKT 371
G+ IVRVDV++D GRTW A G D SQ + W W WR +P
Sbjct: 280 GRRIVRVDVSLDNGRTWDQARLLADTVKPGPDRASQDHGHKSWAWQRWRYDGVVPFGDGP 339
Query: 372 KEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ + L+ K D A NA PD +A++
Sbjct: 340 EGGKVCSTLLVKA---TDEAYNAQPDGYEAIW 368
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KA D +YN QP+ + IWN RG L+NA+HR RV
Sbjct: 351 KATDEAYNAQPDGYEAIWNFRGNLTNAWHRYRV 383
>gi|90418300|ref|ZP_01226212.1| polynucleotide adenylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90337972|gb|EAS51623.1| polynucleotide adenylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 413
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC-NNPNNHKEEV 705
R DG++ D G EDL F+GD +RI+EDYLRILR+FRFFA P+
Sbjct: 131 RADGSIVDLVGGIEDLGSQALRFIGDSETRIREDYLRILRFFRFFAWYGKGRPDAAGIRA 190
Query: 706 LSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ +K+ LDGL S ER+WTEL K+L +L M +L
Sbjct: 191 ATRLKDGLDGL---SVERVWTELKKLLAAPDPSRALLWMRQTGVL 232
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 835 ELNKILGGSFSKEMMLK-MLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFS 888
E +I+GG+ ++ + +I++ DET ++ G FR++P T++
Sbjct: 28 EEARIVGGAVRNSVLGHPVSDIDIATTTLPDETVRRVEAAG-FRAVPTGIEHGTVTVVTP 86
Query: 889 ANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+ + +TTLR D+ TDGRHA V F DWK DA RRD T+N+++
Sbjct: 87 EHAYE----VTTLRRDIETDGRHAAVHFGRDWKADAERRDFTINALY 129
>gi|242082101|ref|XP_002445819.1| hypothetical protein SORBIDRAFT_07g026290 [Sorghum bicolor]
gi|241942169|gb|EES15314.1| hypothetical protein SORBIDRAFT_07g026290 [Sorghum bicolor]
Length = 395
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 252 LSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQM 311
+ + E + Q DYK F P+ DWD ++++ + PV SAIC + D + ++ +
Sbjct: 227 IKEEECQGFFVQKDYKMFPPTVDWDNINWSTRRPQMDFPVQSAICT-LEDVDV-IKEGKA 284
Query: 312 EVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQD-----SQAPLTRHWGWTLWRATIP 366
+ GYA SGGG+ I RVD+++D G+TW A +D S P + W W L+ AT+
Sbjct: 285 RIAGYALSGGGRGIERVDISVDGGKTWIEARRYQKDNVAYVSDGPQSDKWAWVLFEATLD 344
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ P E+ +D A N P++++ ++
Sbjct: 345 I-PANAEIVA---------KAVDSAANVQPEKVEDIW 371
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 32/40 (80%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVE 519
+ EI +KAVDS+ N QPE +IWNLRG+L+ ++HR++++
Sbjct: 348 NAEIVAKAVDSAANVQPEKVEDIWNLRGILNTSWHRIKIQ 387
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA V+ V+G+ W +A+G ATW GA+L DVL+ I S+ S +HV
Sbjct: 98 CAGNRRTAMSNVRKVRGVGWDISALGTATWGGAKLSDVLELVRIPKLSSVTSLGGKHVE 156
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 110 ASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTP 148
A Y EP R P LK S +P+NAEP S LV +++TP
Sbjct: 6 APSDYAEEPPRHPALKINSKEPFNAEPHRSALVASYITP 44
>gi|24159087|pdb|1MJ4|A Chain A, Crystal Structure Analysis Of The Cytochrome B5 Domain
Of Human Sulfite Oxidase
Length = 82
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHL 81
Y+ ++ +H ++ IWV V+D+TEFV +HPGG +M AAGG +EPFWA+Y VH
Sbjct: 7 YTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHN 66
Query: 82 QDEVFELLESYRIGNI 97
Q V ELL Y+IG +
Sbjct: 67 QSHVRELLAQYKIGEL 82
>gi|225677338|ref|ZP_03788313.1| poly A polymerase family protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590624|gb|EEH11876.1| poly A polymerase family protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 390
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYF G EDLK F+G+ RI+EDYLRILR FRF A+IC + +E+LS
Sbjct: 125 GHIYDYFGGIEDLKARRLNFIGNAEDRIKEDYLRILRAFRFHAKIC--AGDLSDEILSVC 182
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
K + + N+SGERI E+ K+L
Sbjct: 183 KKHSHMIQNLSGERIRDEILKLL 205
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV DGRHA+V+FT +W+ DA+RRD T N+++
Sbjct: 83 ITTLRHDVKCDGRHAKVEFTNNWQADASRRDFTFNALY 120
>gi|407780072|ref|ZP_11127319.1| polynucleotide adenylyltransferase [Nitratireductor pacificus
pht-3B]
gi|407298070|gb|EKF17215.1| polynucleotide adenylyltransferase [Nitratireductor pacificus
pht-3B]
Length = 422
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G DL+ F+GDP RI+EDYLRILR+FRFFA E L A
Sbjct: 134 DGAVVDLVGGIADLESRTLRFIGDPDLRIREDYLRILRFFRFFA--WYGAGRPDAEGLKA 191
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ER+W EL K+L + +L M +L
Sbjct: 192 CARLKDGLGQLSAERVWAELKKLLAATDPSRALLWMRQTGVL 233
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGR A V F DW+ DA RRD T+N+++
Sbjct: 93 VTTLRSDIETDGRRASVTFGRDWQRDAERRDFTINALY 130
>gi|114569280|ref|YP_755960.1| polynucleotide adenylyltransferase [Maricaulis maris MCS10]
gi|114339742|gb|ABI65022.1| Polynucleotide adenylyltransferase region [Maricaulis maris MCS10]
Length = 419
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 642 KDRSFRL-------DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
K R FRL DGTV+D G +D++ FVGDP RI+EDYLRILR FRF A
Sbjct: 129 KRRDFRLNALYADADGTVFDPTGGLKDVENRRFVFVGDPEMRIREDYLRILRLFRFEAWY 188
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ E ++A+ + +GLH +S ER+W EL K+L + M LL
Sbjct: 189 GRGAPD--EAAMAAVLKHREGLHKLSVERVWAELKKLLAAQDPLAAVTAMRESGLL 242
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
Query: 837 NKILGGSFSKEMMLK-MLEINMFPHLGTDETFATLDFEGLFRSMPIP-------FTLLFS 888
++ +GG ++ + + +I++ L D+ A GL P+P T++
Sbjct: 40 SRFVGGCVRNALLGEPVADIDIATQLDPDQVIAAAKAAGL---KPVPTGKAHGTITVVCD 96
Query: 889 ANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
F +T+LR DV TDGR A V FT DW DA RRD +N+++
Sbjct: 97 GQPFE----VTSLRRDVATDGRRAVVSFTRDWAEDAKRRDFRLNALY 139
>gi|322780865|gb|EFZ10094.1| hypothetical protein SINV_15615 [Solenopsis invicta]
Length = 258
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 681 YLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEM 740
Y+ RYFRF+ RI ++P+ H E + A+K N+DGL ISGERIW+E +KIL G+FS E+
Sbjct: 1 YIIAARYFRFYGRIMDSPDQHDEATIKALKENIDGLQQISGERIWSEWSKILTGNFSLEL 60
Query: 741 MLKML 745
LK+L
Sbjct: 61 TLKLL 65
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ RI ++P+ H E + A+K+N+DGL ISGERIW+E +KIL G+FS E+ LK+LE
Sbjct: 9 RFYGRIMDSPDQHDEATIKALKENIDGLQQISGERIWSEWSKILTGNFSLELTLKLLECG 68
Query: 857 MFPHLGTDETFATLDFEGLFR 877
H+G E +F +++
Sbjct: 69 ASKHIGLPEQPDIENFRNVYQ 89
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 746 YQNLLLFSKLKA-TTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNII 795
YQ L+L +K ++EY+ EL +Y +L+ +F +W +P FP+NG+++
Sbjct: 150 YQKLVLLQTMKRYEILQEYVKELFRYNGAMQLLDEFERWTIPKFPVNGSML 200
>gi|395492385|ref|ZP_10423964.1| Polynucleotide adenylyltransferase region [Sphingomonas sp. PAMC
26617]
Length = 405
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
+ G ++DYF G +DL G F+GDP+ RI ED+LRILR+FRF AR + P+ +
Sbjct: 134 VSGEIFDYFGGIDDLAAGRVRFIGDPLQRIAEDHLRILRFFRFHARFGDVPDAAGLAACT 193
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL 751
A N+L L S ERI EL K+L + + M+ +LL
Sbjct: 194 ARANDLMAL---SRERIAAELLKLLVAPGAVATLKLMIAHGILL 234
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D++TDGRHA V FT+DW+ DA RRD T+N+++
Sbjct: 93 VTTLRRDLSTDGRHAVVAFTDDWREDAARRDFTINALY 130
>gi|42520318|ref|NP_966233.1| poly A polymerase family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410056|gb|AAS14167.1| poly A polymerase family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 391
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYF G EDLK F+G+ RI+EDYLRILR FRF A+IC + +E+LS
Sbjct: 125 GHIYDYFGGIEDLKARRLNFIGNAEDRIKEDYLRILRAFRFHAKIC--VGDLSDEILSVC 182
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
K + + N+SGERI E+ K+L
Sbjct: 183 KKHSHMIQNLSGERIRDEILKLL 205
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV DGRHA+V+FT +W+ DA+RRD T N+++
Sbjct: 83 ITTLRHDVKCDGRHAKVEFTNNWQADASRRDFTFNALY 120
>gi|68171795|ref|ZP_00545137.1| Polynucleotide adenylyltransferase [Ehrlichia chaffeensis str.
Sapulpa]
gi|88657671|ref|YP_507900.1| polyA polymerase/tRNA nucleotidyltransferase family protein
[Ehrlichia chaffeensis str. Arkansas]
gi|67998786|gb|EAM85496.1| Polynucleotide adenylyltransferase [Ehrlichia chaffeensis str.
Sapulpa]
gi|88599128|gb|ABD44597.1| polyA polymerase/tRNA nucleotidyltransferase family protein
[Ehrlichia chaffeensis str. Arkansas]
Length = 401
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G VYDYF+G +DL+K F+GDP RIQEDYLRILR FRF+A IC + N +E++ +
Sbjct: 129 GIVYDYFSGIQDLEKKHLNFIGDPEIRIQEDYLRILRAFRFYASIC-SQNKLSDEIVHSC 187
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
++N+S ERI E K+L
Sbjct: 188 TKYSSYINNLSRERIRDEFFKLL 210
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
ITTLR D++ DGRHAEV+FT +W+ DA+RRD T N+++ K
Sbjct: 87 ITTLRSDISCDGRHAEVKFTNNWQQDASRRDFTFNALYCDEK 128
>gi|357026126|ref|ZP_09088234.1| polynucleotide adenylyltransferase region [Mesorhizobium amorphae
CCNWGS0123]
gi|355542090|gb|EHH11258.1| polynucleotide adenylyltransferase region [Mesorhizobium amorphae
CCNWGS0123]
Length = 423
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 581 SCFTPELKRLAGIFEKHGYQLRIAG--EGTVTA-------KVLSYRNRREKEDRIGENQP 631
+C E KR A E G++ G GT+TA +V + R E + R +
Sbjct: 57 TCLPEETKRRA---EAAGFKTVPTGIEHGTITAVAGGKAYEVTTLRADIETDGRRAKVSF 113
Query: 632 FRKLTLSVQDKDRSF-----RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILR 686
R L + +D + DGTV D G D++ F+GD +RI+EDYLRILR
Sbjct: 114 GRDWKLDAERRDFTINALYAEADGTVVDLVGGIADIEARRLRFIGDAEARIREDYLRILR 173
Query: 687 YFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
+FRFFA + + E L A +GL +S ER+W+EL K+L +L M
Sbjct: 174 FFRFFAWYGDGRPDA--EGLKACARLKEGLSQLSAERVWSELKKLLSAPDPSRALLWMRQ 231
Query: 747 QNLL 750
+L
Sbjct: 232 AGVL 235
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGR A+V F DWKLDA RRD T+N+++
Sbjct: 95 VTTLRADIETDGRRAKVSFGRDWKLDAERRDFTINALY 132
>gi|71082812|ref|YP_265531.1| poly(A) polymerase [Candidatus Pelagibacter ubique HTCC1062]
gi|71061925|gb|AAZ20928.1| Poly(A) Polymerase (PAP) [Candidatus Pelagibacter ubique HTCC1062]
Length = 424
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
++G+++D F+G +DL++G F+G+ +RI+EDYLR+LRY RFF + + ++H +V+
Sbjct: 149 IEGSLFDPFDGKKDLERGKINFIGNVETRIKEDYLRVLRYVRFF--LSYSKHSHDPQVIK 206
Query: 708 AIKNNLDGLHNISGERIWTELNKIL 732
AIK NL G+ +IS ER+ E K+L
Sbjct: 207 AIKKNLSGVSSISSERLIDEFQKLL 231
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 33/38 (86%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
IT+LR D+ TDGRHA+V+F++ WK DA+RRD T+NS++
Sbjct: 109 ITSLRKDIDTDGRHAKVEFSDSWKEDASRRDFTINSIY 146
>gi|357148572|ref|XP_003574817.1| PREDICTED: sulfite oxidase-like [Brachypodium distachyon]
Length = 397
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 19/158 (12%)
Query: 252 LSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQM 311
L + E + Q DYK F P+ DWD +D++ + PV SAIC + D + ++ +
Sbjct: 227 LIEEECQGFFMQKDYKMFPPTVDWDNIDWSTRRPQMDFPVQSAICT-LEDVDV-IKEGKA 284
Query: 312 EVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL------TRHWGWTLWRATI 365
+ GYA SGGG+ I RVDV++D G+TW V Q S P + W W L+ AT+
Sbjct: 285 RIAGYAVSGGGRGIERVDVSVDGGKTW-VEAHRYQKSNVPYVSDRAQSDKWAWVLFEATL 343
Query: 366 PVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ P E+ +D A N P++++ ++
Sbjct: 344 DI-PANAEIVA---------KAVDSAANIQPEKVEDIW 371
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 32/40 (80%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVE 519
+ EI +KAVDS+ N QPE +IWNLRG+L+ ++HR++++
Sbjct: 348 NAEIVAKAVDSAANIQPEKVEDIWNLRGILNTSWHRIKIQ 387
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA +V+ V+G+ W +A+GNATW GA+L DVL+ AGI S+ S +HV
Sbjct: 98 CAGNKRTAMSKVRKVRGVGWDVSALGNATWGGAKLADVLELAGIPKLSSVTSLGGKHVE 156
>gi|149036852|gb|EDL91470.1| rCG56075 [Rattus norvegicus]
Length = 182
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 72/174 (41%), Gaps = 51/174 (29%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 1 MKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTEM 60
Query: 606 ------------------EGTVTAK-------VLSYRNRREKEDRIGENQPFRKLTLSVQ 640
GT+TA+ V + R + R E + +
Sbjct: 61 KEMFQAAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVSTDGRHAEVEFTTDWQKDAE 120
Query: 641 DKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
+D + DGT++DYFNG+ DLK FVG RIQEDYLRILRYF R+
Sbjct: 121 RRDLTISFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFSLGNRM 174
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP +MK MF +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 36 AVRDLLNGVKPQDVDFATTATPTEMKEMFQAAGIRMINNKGEKHGTITARLHE-ENFEVT 94
Query: 435 PVK 437
++
Sbjct: 95 TLR 97
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 32/35 (91%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVN 932
+TTLRIDV+TDGRHAEV+FT DW+ DA RRDLT++
Sbjct: 93 VTTLRIDVSTDGRHAEVEFTTDWQKDAERRDLTIS 127
>gi|56694954|ref|YP_165299.1| poly(A) polymerase [Ruegeria pomeroyi DSS-3]
gi|56676691|gb|AAV93357.1| polyA polymerase family protein [Ruegeria pomeroyi DSS-3]
Length = 384
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
D I E+ R T++ R DGTV D +G DL+ F+GD RI+EDYLR
Sbjct: 110 DSIHEDAARRDFTMNAL----YARPDGTVLDPLDGLPDLQARRVRFIGDATDRIREDYLR 165
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
LRYFRF A + E L+AI NLDGL +S ER+ E+ K+
Sbjct: 166 SLRYFRFHAWYGDAEAGFDAEALAAIAGNLDGLSRLSRERVGAEMLKLF 214
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F++ DA RRD T+N+++
Sbjct: 90 VTTFRRDVETDGRRAVVAFSDSIHEDAARRDFTMNALY 127
>gi|115477461|ref|NP_001062326.1| Os08g0530400 [Oryza sativa Japonica Group]
gi|22759584|dbj|BAC10905.1| Moco containing protein [Oryza sativa Japonica Group]
gi|42407882|dbj|BAD09023.1| Moco containing protein(OsMCP) [Oryza sativa Japonica Group]
gi|42407984|dbj|BAD09122.1| Moco containing protein(OsMCP) [Oryza sativa Japonica Group]
gi|113624295|dbj|BAF24240.1| Os08g0530400 [Oryza sativa Japonica Group]
gi|125604117|gb|EAZ43442.1| hypothetical protein OsJ_28048 [Oryza sativa Japonica Group]
Length = 397
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 254 DHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEV 313
+ E + Q DYK F PS DWD ++++ + PV SAIC + D + ++ + +
Sbjct: 229 EEECQGFFVQKDYKMFPPSVDWDNINWSTRRPQMDFPVQSAICT-LEDVDV-IKEGKARI 286
Query: 314 QGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQD-----SQAPLTRHWGWTLWRATIPVD 368
GYA SGGG+ I RVD+++D G+TW A+ + S P + W W L+ AT+ V
Sbjct: 287 AGYAVSGGGRGIERVDISVDGGKTWVEAHRYQKSNVPYISDGPRSDKWAWVLFEATLDV- 345
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P E+ +D A N P++++ ++
Sbjct: 346 PANAEIVA---------KAVDSAANVQPEKVEDVW 371
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVE 519
+ EI +KAVDS+ N QPE ++WNLRG+L+ ++HR++++
Sbjct: 348 NAEIVAKAVDSAANVQPEKVEDVWNLRGILNTSWHRIKIQ 387
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA +V+ V+G+ W +A+GNATW GA+L DVL+ GI S+ S +HV
Sbjct: 98 CAGNRRTAMSKVRKVRGVGWDISALGNATWGGAKLSDVLELVGIPKLSSVTSLGGKHVE 156
>gi|399994599|ref|YP_006574839.1| tRNA-nucleotidyltransferase [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|398659154|gb|AFO93120.1| putative tRNA-nucleotidyltransferase [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 384
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
DRI E+ R T++ R DG + D NG DL F+G RI+EDYLR
Sbjct: 110 DRIEEDAARRDFTMNAL----YARPDGVLVDPLNGLPDLHARAVRFIGSAAQRIREDYLR 165
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
LRYFRF A N+ + LSAI NLDG+ +S ER+ +E+ K+L
Sbjct: 166 SLRYFRFHAWYGNSDAGFDPDALSAIAENLDGIGRLSRERVGSEVLKLL 214
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGR A V F + + DA RRD T+N+++
Sbjct: 90 ITTFRRDVATDGRRAVVAFADRIEEDAARRDFTMNALY 127
>gi|402497026|ref|YP_006556286.1| tRNA nucleotidyltransferasepolyA-polymerase [Wolbachia endosymbiont
of Onchocerca ochengi]
gi|398650299|emb|CCF78469.1| tRNA nucleotidyltransferasepolyA-polymerase [Wolbachia endosymbiont
of Onchocerca ochengi]
Length = 426
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYF G +DLK FVGD R++EDYLRILR FRF A+IC + +E+L
Sbjct: 126 GHIYDYFGGIQDLKARRLNFVGDAEGRVKEDYLRILRVFRFHAKIC--VGDLSDEILDVC 183
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
K + + N+SGERI E+ K+L
Sbjct: 184 KRHSHMIQNLSGERIREEMFKLL 206
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 899 TTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
TTLR D+ DGRHA+V+FT DWK DA+RRD T N+++
Sbjct: 85 TTLRCDIKCDGRHAKVEFTNDWKADASRRDFTFNALY 121
>gi|404252768|ref|ZP_10956736.1| Polynucleotide adenylyltransferase region [Sphingomonas sp. PAMC
26621]
Length = 405
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
+ G ++DYF G +DL G F+GDP+ RI ED+LRILR+FRF AR + P+ +
Sbjct: 134 VSGEIFDYFGGIDDLAAGRVRFIGDPLQRIAEDHLRILRFFRFHARFGDVPDADGLAACT 193
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL 751
A N+L L S ERI E+ K+L + + M+ +LL
Sbjct: 194 ARANDLMAL---SRERIAAEMLKLLVAPGAVATLNLMIAHGILL 234
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D++TDGRHA V FT+DW+ DA RRD T+N+++
Sbjct: 93 VTTLRRDLSTDGRHAVVAFTDDWREDAARRDFTINALY 130
>gi|83591706|ref|YP_425458.1| polynucleotide adenylyltransferase [Rhodospirillum rubrum ATCC
11170]
gi|83574620|gb|ABC21171.1| Polynucleotide adenylyltransferase region [Rhodospirillum rubrum
ATCC 11170]
Length = 525
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ DR +G V+DYF+G DL G F+G P+ RI EDYLRILR+
Sbjct: 185 EDAGRRDFTINALSADR----EGRVFDYFDGISDLHAGWVRFIGRPMDRIAEDYLRILRF 240
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF AR P + + LSA GL +S ER+ +EL KIL + +++ M
Sbjct: 241 FRFHARFGRPPAD--PDALSACAAQAAGLDRLSAERVRSELLKILDTADPAGVLMAMRGV 298
Query: 748 NLL 750
++L
Sbjct: 299 HVL 301
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR D DGRHAEV FT ++ DA RRD T+N++
Sbjct: 161 VTTLRRDTACDGRHAEVAFTTSFREDAGRRDFTINAL 197
>gi|58584420|ref|YP_197993.1| tRNA nucleotidyltransferase/poly(A) polymerase [Wolbachia
endosymbiont strain TRS of Brugia malayi]
gi|58418736|gb|AAW70751.1| tRNA nucleotidyltransferase/poly(A) polymerase [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 399
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYF G +DLK F+G+ RI+EDYLRILR FRF A+IC + +++L+
Sbjct: 133 GHIYDYFGGTQDLKARRLNFIGNAEDRIKEDYLRILRAFRFHAKIC--IGDMSDKILNVC 190
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
K + ++N+SGERI E+ K+L
Sbjct: 191 KKHAHKIYNLSGERIRDEMFKLL 213
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV DGRHA+V+FT++W+ DA+RRD T N+++
Sbjct: 91 ITTLRHDVKCDGRHAKVEFTDNWRADASRRDFTFNALY 128
>gi|346994873|ref|ZP_08862945.1| polyA polymerase family protein [Ruegeria sp. TW15]
Length = 384
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
DR+ E+ R T++ + DGT+ D NG DL+ F+G+ RI+EDYLR
Sbjct: 110 DRVEEDAARRDFTMNAL----YAKPDGTILDPLNGLPDLQARRVRFIGEASDRIREDYLR 165
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
LRYFRF A + + L AI NLDGL +S ER+ E+ K+L
Sbjct: 166 SLRYFRFHAWYGDADQGFDPDALDAIAANLDGLETLSRERVGAEMLKLLAA 216
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F++ + DA RRD T+N+++
Sbjct: 90 VTTFRRDVETDGRRAVVAFSDRVEEDAARRDFTMNALY 127
>gi|91762765|ref|ZP_01264730.1| Poly(A) Polymerase (PAP) [Candidatus Pelagibacter ubique HTCC1002]
gi|91718567|gb|EAS85217.1| Poly(A) Polymerase (PAP) [Candidatus Pelagibacter ubique HTCC1002]
Length = 424
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
++G+++D F+G +DL+ G F+G+ +RI+EDYLR+LRY RFF + + ++H +V+
Sbjct: 149 IEGSLFDPFDGKKDLESGKINFIGNVETRIKEDYLRVLRYVRFF--LSYSKHSHDPQVIK 206
Query: 708 AIKNNLDGLHNISGERIWTELNKIL 732
AIK NL G+ +IS ER+ E K+L
Sbjct: 207 AIKKNLSGVSSISSERLIDEFQKLL 231
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 33/38 (86%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
IT+LR D+ TDGRHA+V+F++ WK DA+RRD T+NS++
Sbjct: 109 ITSLRKDIDTDGRHAKVEFSDSWKEDASRRDFTINSIY 146
>gi|332186789|ref|ZP_08388531.1| poly A polymerase head domain protein [Sphingomonas sp. S17]
gi|332013122|gb|EGI55185.1| poly A polymerase head domain protein [Sphingomonas sp. S17]
Length = 383
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++DYF G +DLK G F+GDP+ RI ED+LRILR+FRF AR + E L+A
Sbjct: 128 GALFDYFGGLDDLKAGRVRFIGDPLQRIAEDHLRILRFFRFHARFGQAID---EAGLAAC 184
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ L +S ERI EL K+L + ++ M+ + +L
Sbjct: 185 TARANDLMALSRERIAAELLKLLVAPGAVPVIALMVERGIL 225
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV+TDGRHA V FT+DW+ DA RRD T+N+++
Sbjct: 85 VTTLRRDVSTDGRHAVVAFTDDWREDAARRDFTMNALY 122
>gi|433773519|ref|YP_007303986.1| tRNA nucleotidyltransferase/poly(A) polymerase [Mesorhizobium
australicum WSM2073]
gi|433665534|gb|AGB44610.1| tRNA nucleotidyltransferase/poly(A) polymerase [Mesorhizobium
australicum WSM2073]
Length = 420
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG+V D G D++ F+GDP +RI+EDYLRILR+FRFFA E L A
Sbjct: 134 DGSVVDLVGGIADIEARRLRFIGDPEARIREDYLRILRFFRFFA--WYGEGRPDAEGLKA 191
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+GL +S ERIW+EL K+L +L M +L
Sbjct: 192 CARLKEGLAQLSAERIWSELKKLLSAPDPSRALLWMRQAGVL 233
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 835 ELNKILGGSFSKEMMLK-MLEINMFPHLGTDETFATLDFEGLFRSMPI-----PFTLLFS 888
E +I GG+ +M + + +I++ ET + EG F+++P T++
Sbjct: 29 EEARIAGGAVRNVLMGQPVTDIDIATSCLPRETIRRAEAEG-FKAVPTGIEHGTITVVAD 87
Query: 889 ANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+ ITTLR DV TDGR A+V F DWKLDA RRD T+N+++
Sbjct: 88 GKPYE----ITTLRADVETDGRRAKVSFGRDWKLDAERRDFTINALY 130
>gi|386348392|ref|YP_006046640.1| polynucleotide adenylyltransferase [Rhodospirillum rubrum F11]
gi|346716828|gb|AEO46843.1| polynucleotide adenylyltransferase region [Rhodospirillum rubrum
F11]
Length = 483
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ DR +G V+DYF+G DL G F+G P+ RI EDYLRILR+
Sbjct: 143 EDAGRRDFTINALSADR----EGRVFDYFDGISDLHAGWVRFIGRPMDRIAEDYLRILRF 198
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF AR P + + LSA GL +S ER+ +EL KIL + +++ M
Sbjct: 199 FRFHARFGRPPAD--PDALSACAAQAAGLDRLSAERVRSELLKILDTADPAGVLMAMRGV 256
Query: 748 NLL 750
++L
Sbjct: 257 HVL 259
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR D DGRHAEV FT ++ DA RRD T+N++
Sbjct: 119 VTTLRRDTACDGRHAEVAFTTSFREDAGRRDFTINAL 155
>gi|347526475|ref|YP_004833222.1| tRNA nucleotidyltransferase [Sphingobium sp. SYK-6]
gi|345135156|dbj|BAK64765.1| tRNA nucleotidyltransferase [Sphingobium sp. SYK-6]
Length = 406
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN-NPNNHKEEVLS 707
DGT++DYF+G DL F+GDP +RI ED+LRILRYFRF AR +P++
Sbjct: 138 DGTLHDYFDGRADLAARRVRFIGDPHARIAEDHLRILRYFRFTARFGTMDPDSADYRACV 197
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A + L ++S ERI EL ++LG + E++ M+ ++L
Sbjct: 198 ARAAS---LMSLSRERIADELLRLLGVADPGEVVAAMIADDVL 237
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DVTTDGR A V F DW+ DA RRD T+N+++
Sbjct: 96 ITTLRRDVTTDGRRATVAFGTDWREDAARRDFTMNALY 133
>gi|418061431|ref|ZP_12699291.1| Sulfite oxidase [Methylobacterium extorquens DSM 13060]
gi|373565028|gb|EHP91097.1| Sulfite oxidase [Methylobacterium extorquens DSM 13060]
Length = 363
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 8/113 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++ + DH ST+ Q +DYK F P +T D AK I+ +P+ +AIC P A +LE
Sbjct: 208 RITVQDHPSTNPMQADDYKLFPPDVTAETADPAKGHTIETMPLNAAICEPARGA--RLEA 265
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLW 361
+ V+GYA + G +A+VRVDV+ D GR+WH A ++ AP WT W
Sbjct: 266 GETTVRGYAIA-GDRAVVRVDVSGDGGRSWHQARLE-HEAGAPFA----WTFW 312
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMN 426
+DP +SI +G P D+ A ++ F E V + CA
Sbjct: 50 IDPAAWRLSIDGADVG--PLDLPLA------DLRTQFPEATVTATMQ--------CAGNR 93
Query: 427 DKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDS 473
+ V PV G W A+G A WTG RL DVL+AAG++P +L S
Sbjct: 94 RADMRAVAPVSGDPWDGGAIGTADWTGVRLGDVLRAAGVAPGANLHS 140
>gi|306843101|ref|ZP_07475723.1| polyA polymerase family protein [Brucella sp. BO2]
gi|306286706|gb|EFM58259.1| polyA polymerase family protein [Brucella sp. BO2]
Length = 423
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D G D++ F+GD RI+EDYLRILR+FRFFA + E L A
Sbjct: 136 DGTVIDQVGGLADIETRTLRFIGDAEQRIREDYLRILRFFRFFA--WYGSGRPEAEGLRA 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DG+ +S ERIW+E+ K+LG +L M +L
Sbjct: 194 SARLKDGIAQLSAERIWSEMKKLLGAPDPSRALLWMRQAGVL 235
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T+GRHA+V F DWK DA RRD T+N++++
Sbjct: 95 VTTLRRDIETNGRHAKVAFGTDWKADAERRDFTINALYV 133
>gi|306844552|ref|ZP_07477141.1| polyA polymerase family protein [Brucella inopinata BO1]
gi|306275163|gb|EFM56919.1| polyA polymerase family protein [Brucella inopinata BO1]
Length = 423
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D G D++ F+GD RI+EDYLRILR+FRFFA + E L A
Sbjct: 136 DGTVIDQVGGLADIETRTLRFIGDAEQRIREDYLRILRFFRFFA--WYGSGRPEAEGLRA 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DG+ +S ERIW+E+ K+LG +L M +L
Sbjct: 194 SARLKDGIAQLSAERIWSEMKKLLGAPDPSRALLWMRQAGVL 235
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T+GRHA+V F DWK DA RRD T+N++++
Sbjct: 95 VTTLRRDIETNGRHAKVAFGTDWKADAERRDFTINALYV 133
>gi|337266769|ref|YP_004610824.1| polynucleotide adenylyltransferase region [Mesorhizobium
opportunistum WSM2075]
gi|336027079|gb|AEH86730.1| Polynucleotide adenylyltransferase region [Mesorhizobium
opportunistum WSM2075]
Length = 420
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G D++ F+GDP +RI+EDYLRILR+FRFFA E L A
Sbjct: 134 DGKVVDLVGGIADIEARRLRFIGDPEARIREDYLRILRFFRFFA--WYGEGRPDAEGLKA 191
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ER+W+EL ++L +L M +L
Sbjct: 192 CARLKDGLAQLSAERVWSELKRLLSAPDPSRALLWMRQAGVL 233
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ TDGR A+V F DWKLDA RRD T+N+++
Sbjct: 93 ITTLRADIETDGRRAKVSFGRDWKLDAERRDFTINALY 130
>gi|58699739|ref|ZP_00374391.1| polynucleotide adenylyltransferase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58533745|gb|EAL58092.1| polynucleotide adenylyltransferase [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 246
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYF G EDLK F+G+ RI+EDYLRILR FRF A+IC + +E+L+
Sbjct: 125 GHIYDYFGGIEDLKARRLNFIGNAEDRIKEDYLRILRAFRFHAKIC--VGDLSDEILNVC 182
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
K + + N+SGERI E+ K+L
Sbjct: 183 KKHSHMIQNLSGERIRDEILKLL 205
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV DGRHA+V+FT +W+ DA+RRD T N+++
Sbjct: 83 ITTLRHDVKCDGRHAKVEFTNNWQADASRRDFTFNALY 120
>gi|17986746|ref|NP_539380.1| poly(A) polymerase [Brucella melitensis bv. 1 str. 16M]
gi|23502417|ref|NP_698544.1| poly(A) polymerase [Brucella suis 1330]
gi|161619496|ref|YP_001593383.1| Poly-A polymerase/tRNA nucleotidyltransferase [Brucella canis ATCC
23365]
gi|163843806|ref|YP_001628210.1| CCA-adding enzyme [Brucella suis ATCC 23445]
gi|225627993|ref|ZP_03786029.1| CCA-adding enzyme [Brucella ceti str. Cudo]
gi|225853031|ref|YP_002733264.1| CCA-adding protein [Brucella melitensis ATCC 23457]
gi|256263487|ref|ZP_05466019.1| polynucleotide adenylyltransferase [Brucella melitensis bv. 2 str.
63/9]
gi|260565226|ref|ZP_05835710.1| polynucleotide adenylyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|260565952|ref|ZP_05836422.1| polynucleotide adenylyltransferase [Brucella suis bv. 4 str. 40]
gi|261219679|ref|ZP_05933960.1| polynucleotide adenylyltransferase protein [Brucella ceti M13/05/1]
gi|261222691|ref|ZP_05936972.1| polynucleotide adenylyltransferase [Brucella ceti B1/94]
gi|261315723|ref|ZP_05954920.1| polynucleotide adenylyltransferase protein [Brucella pinnipedialis
M163/99/10]
gi|261318161|ref|ZP_05957358.1| polynucleotide adenylyltransferase protein [Brucella pinnipedialis
B2/94]
gi|261322568|ref|ZP_05961765.1| polynucleotide adenylyltransferase protein [Brucella ceti
M644/93/1]
gi|261325612|ref|ZP_05964809.1| polynucleotide adenylyltransferase [Brucella neotomae 5K33]
gi|261752841|ref|ZP_05996550.1| polynucleotide adenylyltransferase protein [Brucella suis bv. 5
str. 513]
gi|261755499|ref|ZP_05999208.1| polynucleotide adenylyltransferase protein [Brucella suis bv. 3
str. 686]
gi|261758730|ref|ZP_06002439.1| polynucleotide adenylyltransferase [Brucella sp. F5/99]
gi|265989192|ref|ZP_06101749.1| polynucleotide adenylyltransferase [Brucella pinnipedialis
M292/94/1]
gi|265991606|ref|ZP_06104163.1| polynucleotide adenylyltransferase protein [Brucella melitensis bv.
1 str. Rev.1]
gi|265995444|ref|ZP_06108001.1| polynucleotide adenylyltransferase [Brucella melitensis bv. 3 str.
Ether]
gi|265998655|ref|ZP_06111212.1| polynucleotide adenylyltransferase protein [Brucella ceti
M490/95/1]
gi|294852871|ref|ZP_06793544.1| poly(A) polymerase [Brucella sp. NVSL 07-0026]
gi|340791160|ref|YP_004756625.1| poly-A polymerase/tRNA nucleotidyltransferase [Brucella
pinnipedialis B2/94]
gi|376275832|ref|YP_005116271.1| CCA-adding enzyme [Brucella canis HSK A52141]
gi|376281209|ref|YP_005155215.1| polyA polymerase family protein [Brucella suis VBI22]
gi|384211914|ref|YP_005600996.1| CCA-adding enzyme [Brucella melitensis M5-90]
gi|384225203|ref|YP_005616367.1| polyA polymerase family protein [Brucella suis 1330]
gi|384409026|ref|YP_005597647.1| CCA-adding protein [Brucella melitensis M28]
gi|384445585|ref|YP_005604304.1| CCA-adding enzyme [Brucella melitensis NI]
gi|17982373|gb|AAL51644.1| poly(a) polymerase / tRNA nucleotidyltransferase [Brucella
melitensis bv. 1 str. 16M]
gi|23348404|gb|AAN30459.1| polyA polymerase family protein [Brucella suis 1330]
gi|161336307|gb|ABX62612.1| Poly-A polymerase/tRNA nucleotidyltransferase [Brucella canis ATCC
23365]
gi|163674529|gb|ABY38640.1| CCA-adding enzyme [Brucella suis ATCC 23445]
gi|225617156|gb|EEH14202.1| CCA-adding enzyme [Brucella ceti str. Cudo]
gi|225641396|gb|ACO01310.1| CCA-adding enzyme [Brucella melitensis ATCC 23457]
gi|260151294|gb|EEW86388.1| polynucleotide adenylyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|260155470|gb|EEW90550.1| polynucleotide adenylyltransferase [Brucella suis bv. 4 str. 40]
gi|260921275|gb|EEX87928.1| polynucleotide adenylyltransferase [Brucella ceti B1/94]
gi|260924768|gb|EEX91336.1| polynucleotide adenylyltransferase protein [Brucella ceti M13/05/1]
gi|261295258|gb|EEX98754.1| polynucleotide adenylyltransferase protein [Brucella ceti
M644/93/1]
gi|261297384|gb|EEY00881.1| polynucleotide adenylyltransferase protein [Brucella pinnipedialis
B2/94]
gi|261301592|gb|EEY05089.1| polynucleotide adenylyltransferase [Brucella neotomae 5K33]
gi|261304749|gb|EEY08246.1| polynucleotide adenylyltransferase protein [Brucella pinnipedialis
M163/99/10]
gi|261738714|gb|EEY26710.1| polynucleotide adenylyltransferase [Brucella sp. F5/99]
gi|261742594|gb|EEY30520.1| polynucleotide adenylyltransferase protein [Brucella suis bv. 5
str. 513]
gi|261745252|gb|EEY33178.1| polynucleotide adenylyltransferase protein [Brucella suis bv. 3
str. 686]
gi|262553279|gb|EEZ09113.1| polynucleotide adenylyltransferase protein [Brucella ceti
M490/95/1]
gi|262766557|gb|EEZ12346.1| polynucleotide adenylyltransferase [Brucella melitensis bv. 3 str.
Ether]
gi|263002390|gb|EEZ14965.1| polynucleotide adenylyltransferase protein [Brucella melitensis bv.
1 str. Rev.1]
gi|263093511|gb|EEZ17545.1| polynucleotide adenylyltransferase [Brucella melitensis bv. 2 str.
63/9]
gi|264661389|gb|EEZ31650.1| polynucleotide adenylyltransferase [Brucella pinnipedialis
M292/94/1]
gi|294821460|gb|EFG38459.1| poly(A) polymerase [Brucella sp. NVSL 07-0026]
gi|326409573|gb|ADZ66638.1| CCA-adding protein [Brucella melitensis M28]
gi|326539277|gb|ADZ87492.1| CCA-adding enzyme [Brucella melitensis M5-90]
gi|340559619|gb|AEK54857.1| poly-A polymerase/tRNA nucleotidyltransferase [Brucella
pinnipedialis B2/94]
gi|343383383|gb|AEM18875.1| polyA polymerase family protein [Brucella suis 1330]
gi|349743574|gb|AEQ09117.1| CCA-adding enzyme [Brucella melitensis NI]
gi|358258808|gb|AEU06543.1| polyA polymerase family protein [Brucella suis VBI22]
gi|363404399|gb|AEW14694.1| CCA-adding enzyme [Brucella canis HSK A52141]
Length = 423
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D G D++ F+GD RI+EDYLRILR+FRFFA + E L A
Sbjct: 136 DGTVIDQVGGLADIETRTLRFIGDAEQRIREDYLRILRFFRFFA--WYGSGRPEAEGLRA 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DG+ +S ERIW+E+ K+LG +L M +L
Sbjct: 194 SARLKDGIAQLSAERIWSEMKKLLGAPDPSRALLWMRQAGVL 235
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T+GRHA+V F DWK DA RRD T+N++++
Sbjct: 95 VTTLRRDIETNGRHAKVAFGTDWKADAERRDFTINALYV 133
>gi|860935|emb|CAA36793.1| sulfite oxidase [Gallus gallus]
Length = 81
Score = 78.2 bits (191), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/77 (48%), Positives = 56/77 (72%), Gaps = 3/77 (3%)
Query: 38 IWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGN 96
+WV V+D+T+FV++HPGG + I+ AAGG++EPFWA+Y VH + V ELL+ Y++G
Sbjct: 7 VWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVHGEPHVLELLQQYKVGE 66
Query: 97 ISQEDSKLAAKDIASDP 113
+S +++ AA D A DP
Sbjct: 67 LSPDEAP-AAPD-AQDP 81
>gi|148560186|ref|YP_001259427.1| polyA polymerase family protein [Brucella ovis ATCC 25840]
gi|148371443|gb|ABQ61422.1| polyA polymerase family protein [Brucella ovis ATCC 25840]
Length = 405
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D G D++ F+GD RI+EDYLRILR+FRFFA + E L A
Sbjct: 118 DGTVIDQVGGLADIETRTLRFIGDAEQRIREDYLRILRFFRFFA--WYGSGRPEAEGLRA 175
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DG+ +S ERIW+E+ K+LG +L M +L
Sbjct: 176 SARLKDGIAQLSAERIWSEMKKLLGAPDPSRALLWMRQAGVL 217
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T+GRHA+V F DWK DA RRD T+N++++
Sbjct: 77 VTTLRRDIETNGRHAKVAFGTDWKADAERRDFTINALYV 115
>gi|400756143|ref|YP_006564511.1| tRNA-nucleotidyltransferase [Phaeobacter gallaeciensis 2.10]
gi|398655296|gb|AFO89266.1| putative tRNA-nucleotidyltransferase [Phaeobacter gallaeciensis
2.10]
Length = 384
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
DRI E+ R T++ R DG + D NG DL+ + F+G RI+EDYLR
Sbjct: 110 DRIEEDAARRDFTMNAL----YARPDGGLVDPLNGLPDLRARLVRFIGSSAQRIREDYLR 165
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
LRYFRF + N + LSAI NLDG+ ++S ER+ +E+ K+L
Sbjct: 166 SLRYFRFHSWYGNPDAGFDPDALSAIAENLDGIGSLSRERVGSEVLKLL 214
Score = 44.7 bits (104), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGR A V F++ + DA RRD T+N+++
Sbjct: 90 ITTFRRDVVTDGRRAVVAFSDRIEEDAARRDFTMNALY 127
>gi|256369969|ref|YP_003107480.1| polyA polymerase family protein [Brucella microti CCM 4915]
gi|256000132|gb|ACU48531.1| polyA polymerase family protein [Brucella microti CCM 4915]
Length = 423
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D G D++ F+GD RI+EDYLRILR+FRFFA + E L A
Sbjct: 136 DGTVIDQVGGLADIETRTLRFIGDAEQRIREDYLRILRFFRFFA--WYGSGRPEAEGLRA 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DG+ +S ERIW+E+ K+LG +L M +L
Sbjct: 194 SARLKDGIAQLSAERIWSEMKKLLGAPDPSRALLWMRQAGVL 235
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T+GRHA+V F DWK DA RRD T+N++++
Sbjct: 95 VTTLRRDIETNGRHAKVAFGTDWKADAERRDFTINALYV 133
>gi|225630119|ref|YP_002726910.1| tRNA nucleotidyltransferase/poly(A) polymerase [Wolbachia sp. wRi]
gi|225592100|gb|ACN95119.1| tRNA nucleotidyltransferase/poly(A) polymerase [Wolbachia sp. wRi]
Length = 390
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYF G EDLK F+G+ RI+EDYLRILR FRF A+IC + +E+L+
Sbjct: 125 GHIYDYFGGIEDLKVRRLNFIGNAEDRIKEDYLRILRAFRFHAKIC--VGDLSDEILNVC 182
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
K + + N+SGERI E+ K+L
Sbjct: 183 KKHSHMIQNLSGERIRDEILKLL 205
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV DGRHA+V+FT +W+ DA+RRD T N+++
Sbjct: 83 ITTLRHDVKCDGRHAKVEFTNNWQADASRRDFTFNALY 120
>gi|330993897|ref|ZP_08317828.1| tRNA-nucleotidyltransferase 1 [Gluconacetobacter sp. SXCC-1]
gi|329759028|gb|EGG75541.1| tRNA-nucleotidyltransferase 1 [Gluconacetobacter sp. SXCC-1]
Length = 397
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ D + G V+DYF G DL G FVG+ +RI ED LRILR+
Sbjct: 101 EDAARRDFTINAMSCDSA----GVVHDYFGGRADLAAGRVRFVGEARTRIVEDALRILRF 156
Query: 688 FRFFARIC-NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
FRF AR + P+ ++A+ +D +S ERIW+EL +IL G
Sbjct: 157 FRFQARYGQSTPDAEAMAAITALAGLID---RLSVERIWSELRRILAG 201
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D TDGRHA V +T DW+ DA RRD T+N+M
Sbjct: 77 ITTLRRDEETDGRHATVAWTHDWREDAARRDFTINAM 113
>gi|326508084|dbj|BAJ86785.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 397
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 19/154 (12%)
Query: 256 ESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQG 315
E + Q DYK F P+ DWD ++++ + PV SAIC + D + ++ + + G
Sbjct: 231 ECQGFFMQKDYKMFPPTVDWDNINWSTRRPQMDFPVQSAICT-LEDVDV-IKEGKARIAG 288
Query: 316 YAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL------TRHWGWTLWRATIPVDP 369
YA SGGG+ I RVD+++D G+TW V Q S P + W W L+ AT+ + P
Sbjct: 289 YAVSGGGRGIERVDISVDGGKTW-VEAHRYQKSNVPYVSDGAQSDKWAWVLFEATLDIPP 347
Query: 370 KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ ++ K +D A N P++++ ++
Sbjct: 348 NAE-------ILAKA---VDSAANIQPEKVEDIW 371
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 32/40 (80%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVE 519
+ EI +KAVDS+ N QPE +IWNLRG+L+ ++HR++++
Sbjct: 348 NAEILAKAVDSAANIQPEKVEDIWNLRGILNTSWHRIKIQ 387
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHV 479
CA +V+ V+G+ W +A+GNATW GA+L DVL+ GI S+ S +HV
Sbjct: 98 CAGNKRTAMSKVRKVRGVGWDISALGNATWGGAKLSDVLELVGIHKLSSVTSLGGKHV 155
>gi|410447196|ref|ZP_11301297.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[SAR86 cluster bacterium SAR86E]
gi|409979887|gb|EKO36640.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[SAR86 cluster bacterium SAR86E]
Length = 384
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGT+ D NG D+ K F+GDP +RI+EDYLRILR+FRF A +H+ E+ +A
Sbjct: 130 DGTILDPLNGIVDIAKKRVKFIGDPYARIKEDYLRILRFFRFLALFGREDESHEIEI-AA 188
Query: 709 IKNNLDGLHNISGERIWTELNKILGG 734
I++ DGL IS ER E+ K+
Sbjct: 189 IRDLRDGLDTISAERKSDEILKLFAA 214
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R D+ TDGR A+V+++E DA RRD ++N+++
Sbjct: 89 ITTFRKDIETDGRRAKVKYSESVLEDAKRRDFSINAIY 126
>gi|265984594|ref|ZP_06097329.1| polynucleotide adenylyltransferase protein [Brucella sp. 83/13]
gi|306837925|ref|ZP_07470785.1| polyA polymerase family protein [Brucella sp. NF 2653]
gi|264663186|gb|EEZ33447.1| polynucleotide adenylyltransferase protein [Brucella sp. 83/13]
gi|306407013|gb|EFM63232.1| polyA polymerase family protein [Brucella sp. NF 2653]
Length = 423
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D G D++ F+GD RI+EDYLRILR+FRFFA + E L A
Sbjct: 136 DGTVIDQVGGLADIEMRTLRFIGDAEQRIREDYLRILRFFRFFA--WYGSGRPEAEGLRA 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DG+ +S ERIW+E+ K+LG +L M +L
Sbjct: 194 SARLKDGIAQLSAERIWSEMKKLLGAPDPSRALLWMRQAGVL 235
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T+GRHA+V F DWK DA RRD T+N++++
Sbjct: 95 VTTLRRDIETNGRHAKVAFGTDWKADAERRDFTINALYV 133
>gi|319781858|ref|YP_004141334.1| polynucleotide adenylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167746|gb|ADV11284.1| Polynucleotide adenylyltransferase region [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 421
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G D++ F+GDP +RI+EDYLRILR+FRFFA + + E L A
Sbjct: 134 DGKVVDLVGGIADIEARRLRFIGDPEARIREDYLRILRFFRFFAWYGDGRPDA--EGLKA 191
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+GL +S ERIW+EL K+L +L M +L
Sbjct: 192 CARLKEGLAQLSSERIWSELKKLLSAPDPSRALLWMRQAGVL 233
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ TDGR A+V F DWKLDA RRD T+N+++
Sbjct: 93 ITTLRADIETDGRRAKVSFGRDWKLDAERRDFTINALY 130
>gi|126738475|ref|ZP_01754180.1| polyA polymerase family protein [Roseobacter sp. SK209-2-6]
gi|126720274|gb|EBA16980.1| polyA polymerase family protein [Roseobacter sp. SK209-2-6]
Length = 384
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 82/179 (45%), Gaps = 20/179 (11%)
Query: 586 ELKRLAGIFE-----KHGYQLRIAGEGTVTAKVLSYRNRREKEDR---------IGENQP 631
EL R AGI HG + EG + +V ++R + R I E+
Sbjct: 60 ELARAAGIKAIPTGIDHGTVTLV--EGHIPHEVTTFRRDVATDGRRAVVAFSKDIAEDAA 117
Query: 632 FRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFF 691
R T++ R DG + D G DL+ F+GD +RI+ED+LR LRYFRF
Sbjct: 118 RRDFTMNAL----YARPDGALVDPLKGLPDLEHRRVRFIGDAGARIREDHLRTLRYFRFH 173
Query: 692 ARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A N+ E L+AI NL+GL +S ERI +EL K+L + M LL
Sbjct: 174 AWYGNHDAGFDPEALAAIAENLEGLAKLSKERITSELLKLLAAEDPAPALAIMRQTGLL 232
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F++D DA RRD T+N+++
Sbjct: 90 VTTFRRDVATDGRRAVVAFSKDIAEDAARRDFTMNALY 127
>gi|406705744|ref|YP_006756097.1| polyA polymerase family protein [alpha proteobacterium HIMB5]
gi|406651520|gb|AFS46920.1| polyA polymerase family protein [alpha proteobacterium HIMB5]
Length = 424
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G ++D + G +D+ G F+GD RI+EDYLRI+RY RFF + N H +L
Sbjct: 150 EGNLFDPYEGRKDILAGKIKFIGDVEKRIKEDYLRIVRYVRFFLKYS--KNKHDPRILKK 207
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
IK NL+G+ N+S ER+ EL KI+
Sbjct: 208 IKINLEGIKNLSSERLLDELRKII 231
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 34/38 (89%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
IT+LR DV TDGRHA+V+F++DWK DA+RRD ++NS++
Sbjct: 109 ITSLRKDVVTDGRHAKVEFSKDWKEDASRRDFSINSIY 146
>gi|58697619|ref|ZP_00372820.1| poly A polymerase family protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|58535877|gb|EAL59663.1| poly A polymerase family protein, partial [Wolbachia endosymbiont
of Drosophila simulans]
Length = 303
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYF G EDLK F+G+ RI+EDYLRILR FRF A+IC + +E+L+
Sbjct: 38 GHIYDYFGGIEDLKVRRLNFIGNAEDRIKEDYLRILRAFRFHAKIC--VGDLSDEILNVC 95
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
K + + N+SGERI E+ K+L
Sbjct: 96 KKHSHMIQNLSGERIRDEILKLL 118
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 904 DVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
DV DGRHA+V+FT +W+ DA+RRD T N+++
Sbjct: 2 DVKCDGRHAKVEFTNNWQADASRRDFTFNALY 33
>gi|344923675|ref|ZP_08777136.1| Polynucleotide adenylyltransferase region [Candidatus Odyssella
thessalonicensis L13]
gi|297717904|gb|ADI50095.1| hypothetical protein [Candidatus Odyssella thessalonicensis L13]
Length = 379
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
DGT+YDY NG +DLKKG F+G RIQEDYLRILR+FRF R P + + L
Sbjct: 124 FDGTIYDYANGQQDLKKGTVRFIGQAADRIQEDYLRILRFFRFHQRFSKQPVSCE---LK 180
Query: 708 AIKNNLD-GLHNISGERIWTELNKILGGS 735
AI + +S ERI E +L S
Sbjct: 181 AIFQKFSPQIKTLSAERITKEFLLLLESS 209
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR DV TDGR A + +T+ W+ DA RRD T+N++++
Sbjct: 84 ITTLRRDVATDGRRATIAYTDKWEEDAARRDFTINALYM 122
>gi|379022416|ref|YP_005299077.1| poly(A) polymerase [Rickettsia canadensis str. CA410]
gi|376323354|gb|AFB20595.1| poly(A) polymerase [Rickettsia canadensis str. CA410]
Length = 403
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 32/190 (16%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF+G +DL++ F+G+ ++RI+EDYLRILR+FRF + N ++ E L A K
Sbjct: 135 IYDYFDGFKDLQQEKVVFIGEALNRIKEDYLRILRFFRFSSYYANQLDH---EGLKACKV 191
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL--LLFS---------------K 754
DGL +S ERI +E+NKI+ + +++ M + L+FS K
Sbjct: 192 LKDGLKTLSRERIKSEMNKIIVSKRAAQILEAMFEIGILELIFSIQNYKIKFFEQANDFK 251
Query: 755 LKATTMREYIVELMKYKEKSELIKDFHKWRLPTF-PMNGNIIRQFFARI-CN------NP 806
L+ T L+ Y +K +K F W+ + M I F CN
Sbjct: 252 LELATR----YALLLYNQKDLNLKVFLDWKFSKYEAMQILSITNFLNDTECNMKKIWLEK 307
Query: 807 NNHKEEVLSA 816
NN+KE +L+A
Sbjct: 308 NNYKEYLLAA 317
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA++ FT D+ DA RRD T+N++
Sbjct: 90 ITTLRKDIECNGRHAKLVFTNDFAEDAARRDFTINAL 126
>gi|353327724|ref|ZP_08970051.1| poly A polymerase family protein [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
Length = 408
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYF G +DLK F+G+ RI+EDYLRILR FRF A+IC + +E+L
Sbjct: 125 GHIYDYFGGIQDLKARKLNFIGNAEDRIKEDYLRILRAFRFHAKIC--IGDLSDEILDVC 182
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
K + + N+SGERI E+ K+L
Sbjct: 183 KKHSHMIQNLSGERIREEIFKLL 205
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV DGRHA+V+FT DW+ DA+RRD T N+++
Sbjct: 83 ITTLRHDVKCDGRHAKVEFTNDWQADASRRDFTFNALY 120
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
+ D ++ + HDID ATN P+Q ++T G KHGT+ A +N K +FE+
Sbjct: 27 CVRDSILQRDIHDIDLATNLLPNQAVKALKLRNIKTI-PTGLKHGTITAILN-KRSFEIT 84
Query: 435 PVK 437
++
Sbjct: 85 TLR 87
>gi|190570623|ref|YP_001974981.1| poly A polymerase family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019125|ref|ZP_03334932.1| poly A polymerase family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190356895|emb|CAQ54272.1| poly A polymerase family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995234|gb|EEB55875.1| poly A polymerase family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 408
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYF G +DLK F+G+ RI+EDYLRILR FRF A+IC + +E+L
Sbjct: 125 GHIYDYFGGIQDLKARKLNFIGNAEDRIKEDYLRILRAFRFHAKIC--IGDLSDEILDVC 182
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
K + + N+SGERI E+ K+L
Sbjct: 183 KKHSHMIQNLSGERIREEIFKLL 205
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV DGRHA+V+FT DW+ DA+RRD T N+++
Sbjct: 83 ITTLRHDVKCDGRHAKVEFTNDWQADASRRDFTFNALY 120
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
+ D ++ + HDID ATN P+Q ++T G KHGT+ A +N K +FE+
Sbjct: 27 CVRDSILQRDIHDIDLATNLLPNQAVKALKLRNIKTI-PTGLKHGTITAILN-KRSFEIT 84
Query: 435 PVK 437
++
Sbjct: 85 TLR 87
>gi|384261568|ref|YP_005416754.1| Polynucleotide adenylyltransferase region [Rhodospirillum
photometricum DSM 122]
gi|378402668|emb|CCG07784.1| Polynucleotide adenylyltransferase region [Rhodospirillum
photometricum DSM 122]
Length = 484
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G VYDYF+G DL G FVG R+QED+LRI+RYFRF A P + EE L+A
Sbjct: 184 EGRVYDYFDGIADLAAGRVRFVGRAQDRLQEDFLRIMRYFRFHAWYGLPPAD--EEALAA 241
Query: 709 IKNNLDGLHNISGERIWTELNKILGG-------SFSKEMMLKMLYQNLLLFSKLKATTMR 761
+ GL ++GER+ E+ ++L + + +L+ L ++ + L+ M
Sbjct: 242 CASLAPGLDTLAGERVRVEMLRLLAAPDPAGVLALMQGRVLERLLPGVVDLAPLRVLVML 301
Query: 762 E 762
E
Sbjct: 302 E 302
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV DGRHA V F + DA RRD T+N++
Sbjct: 143 ITTLRRDVACDGRHAHVAFCTSFYEDAKRRDFTINAL 179
>gi|261214534|ref|ZP_05928815.1| polynucleotide adenylyltransferase protein [Brucella abortus bv. 3
str. Tulya]
gi|260916141|gb|EEX83002.1| polynucleotide adenylyltransferase protein [Brucella abortus bv. 3
str. Tulya]
Length = 423
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G D++ F+GD RI+EDYLRILR+FRFFA + E L A
Sbjct: 136 DGMVIDQVGGLADIETRTLRFIGDAEQRIREDYLRILRFFRFFA--WYGSGRPEAEGLRA 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DG+ IS ERIW+E+ K+LG +L M +L
Sbjct: 194 SARLKDGIAQISAERIWSEMKKLLGAPDPSRALLWMRQAGVL 235
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T+GRHA+V F DWK DA RRD T+N++++
Sbjct: 95 VTTLRRDIETNGRHAKVAFGTDWKADAERRDFTINALYV 133
>gi|390450141|ref|ZP_10235737.1| polynucleotide adenylyltransferase [Nitratireductor aquibiodomus
RA22]
gi|389662914|gb|EIM74459.1| polynucleotide adenylyltransferase [Nitratireductor aquibiodomus
RA22]
Length = 422
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVL 706
R DG + D G DL+ F+GD +RI EDYLRILR+FRFFA + L
Sbjct: 132 RADGEIVDLVGGLPDLENRTLRFIGDADTRITEDYLRILRFFRFFAWYGRGRPDAAG--L 189
Query: 707 SAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A + DGL +S ER+W EL K+L +L M +L
Sbjct: 190 KACARHRDGLERLSAERVWAELKKLLSAPDPSRALLWMRQTGVL 233
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGRHA V F DW+ DA RRD T+N+++
Sbjct: 93 VTTLRADVETDGRHASVTFGRDWRSDAERRDFTINALY 130
>gi|84500746|ref|ZP_00998995.1| polyA polymerase family protein [Oceanicola batsensis HTCC2597]
gi|84391699|gb|EAQ04031.1| polyA polymerase family protein [Oceanicola batsensis HTCC2597]
Length = 386
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G + D G DL+ FVG+P +RI EDYLRILR+FRFFA + E L+A
Sbjct: 130 EGEIVDPLGGLPDLRARRLRFVGEPAARIIEDYLRILRFFRFFAWYGDPSQGMDPEALAA 189
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
I ++DGL +S ER+ E+ K+L
Sbjct: 190 IAGHVDGLSRLSRERVGHEMRKLL 213
Score = 47.4 bits (111), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGRHA V +++D DA RRD T+N+++
Sbjct: 89 VTTFRRDVETDGRHALVHYSDDPAEDAARRDFTMNALY 126
>gi|73667505|ref|YP_303521.1| polynucleotide adenylyl transferase [Ehrlichia canis str. Jake]
gi|72394646|gb|AAZ68923.1| Polynucleotide adenylyl transferase [Ehrlichia canis str. Jake]
Length = 396
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G VYDYF+G EDL+K F+GDP RI+EDYLRILR FRF+ IC + N ++++
Sbjct: 129 GIVYDYFSGIEDLEKKQLNFIGDPEIRIKEDYLRILRAFRFYTSIC-SKNTLSDQIIYCC 187
Query: 710 KNNLDGLHNISGERIWTELNKILG 733
++ +S ERI E K+L
Sbjct: 188 TKYSSCINKLSKERIRDEFFKLLS 211
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ DGRHAEV+FT +W+ DA+RRD T N+++
Sbjct: 87 ITTLRSDINCDGRHAEVKFTNNWRQDASRRDFTFNALY 124
>gi|408787853|ref|ZP_11199579.1| tRNA nucleotidyltransferase [Rhizobium lupini HPC(L)]
gi|408486317|gb|EKJ94645.1| tRNA nucleotidyltransferase [Rhizobium lupini HPC(L)]
Length = 418
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D NG D++ G F+GD +RI EDYLRILR+FRFFA + + + L A
Sbjct: 133 GEIIDLINGLPDIETGTVRFIGDAATRISEDYLRILRFFRFFAHYGSGRPDA--DGLRAS 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L +S ER+W+EL K+L +L M +L
Sbjct: 191 ARAKDRLATLSAERVWSELKKLLSARDPSRALLWMRQSGVL 231
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 17/118 (14%)
Query: 830 ERIWTELN------KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIP 882
+RI+ LN +I+GG+ +M L +++I+M L D A G+ +++P
Sbjct: 16 KRIFALLNADGGEVRIVGGAVRNALMGLPVVDIDMATTLTPDMVVARAKAAGI-KAVPTG 74
Query: 883 F-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
TL+ F +TTLR DV T+GRHA+V F DW+ DA RRDLT+N+++
Sbjct: 75 IEHGTVTLVIDGEGFE----VTTLRRDVETNGRHAQVAFGTDWQTDAERRDLTINALY 128
>gi|393721475|ref|ZP_10341402.1| Polynucleotide adenylyltransferase region [Sphingomonas echinoides
ATCC 14820]
Length = 407
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 7/181 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++DYF+G DL F+GDP+ RI ED+LRILR+FRF AR + P+ + +A
Sbjct: 137 GEIFDYFDGLADLAAHRVRFIGDPLQRIAEDHLRILRFFRFHARFGDAPDAAGLDACTAR 196
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL--LFSKLKATTMREYIVEL 767
N+L L S ERI EL K+L + + M+ + + + ++ + E ++
Sbjct: 197 ANDLMAL---SRERIAAELLKLLVAPNAVATLRLMVERGIFRPVLPEITGGGV-EAFADV 252
Query: 768 MKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVLSAIKKNLDGLHNI 827
+ + L D + P + + AR+ N ++ ++SA+ +L +
Sbjct: 253 AGSETLAGLTPDPIRRLAAVLPRDAKVGEDVAARL-KLSNAQRKRIVSALTPDLAAPQAL 311
Query: 828 S 828
S
Sbjct: 312 S 312
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGRHA V FT+DW+ DA RRD T+N+++
Sbjct: 94 VTTLRSDVATDGRHATVAFTDDWREDAARRDFTINALY 131
>gi|148553037|ref|YP_001260619.1| polynucleotide adenylyltransferase [Sphingomonas wittichii RW1]
gi|148498227|gb|ABQ66481.1| Polynucleotide adenylyltransferase region [Sphingomonas wittichii
RW1]
Length = 401
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ D S G V+DYF G DL G+ F+GDP+ RI ED+LRILR
Sbjct: 115 EDAARRDFTINALSADPST---GAVHDYFGGRADLDAGLVRFIGDPLRRIAEDHLRILRL 171
Query: 688 FRFFARIC-NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILG 733
FRF AR P+ + A N+ L +S ER+ EL K+LG
Sbjct: 172 FRFHARFGRGTPDAAALDACIARAND---LMALSRERVADELLKLLG 215
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 814 LSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDF 872
L + + LD L G+ + +GG+ ++ L + +I+ L +E+ +
Sbjct: 12 LPGLDRLLDALGAAEGD------VRFVGGAVRDTLLGLPVKDIDCATRLLPEESSRRIAA 65
Query: 873 EGLFRSMPIPFT-LLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTV 931
G F+++P +A +TTLR DV TDGR A V FT++W+ DA RRD T+
Sbjct: 66 AG-FKAIPTGIAHGTVTALLPSGPVEVTTLRRDVATDGRRAVVAFTDEWREDAARRDFTI 124
Query: 932 NSM 934
N++
Sbjct: 125 NAL 127
>gi|114762223|ref|ZP_01441691.1| polyA polymerase family protein [Pelagibaca bermudensis HTCC2601]
gi|114545247|gb|EAU48250.1| polyA polymerase family protein [Roseovarius sp. HTCC2601]
Length = 363
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
D I E+ R T++ D G V D NG DL+ F+ D RI+EDYLR
Sbjct: 91 DDIAEDAARRDFTMNALYADAR----GEVLDPLNGLPDLEARRVRFIRDAGERIREDYLR 146
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
ILR+FRF A + EE L+ I NLDGL +S ER+ E+ ++L S
Sbjct: 147 ILRFFRFHAWYGDPDAGVDEEALAGIATNLDGLAALSAERVGHEITRLLSAS 198
Score = 46.6 bits (109), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V++++D DA RRD T+N+++
Sbjct: 71 VTTFRADVETDGRRAVVRYSDDIAEDAARRDFTMNALY 108
>gi|13472434|ref|NP_104001.1| poly(A) polymerase [Mesorhizobium loti MAFF303099]
gi|14023180|dbj|BAB49787.1| probable poly(A) polymerase [Mesorhizobium loti MAFF303099]
Length = 420
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G D++ F+GD +RI+EDYLRILR+FRFFA E L A
Sbjct: 134 DGRVVDLVGGIADIEARRLRFIGDAEARIREDYLRILRFFRFFA--WYGEGRPDAEGLKA 191
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+GL +S ERIW EL K+L S +L M +L
Sbjct: 192 CARLKEGLAQLSAERIWAELKKLLSASDPSRALLWMRQAGVL 233
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV TDGR A+V F DWKLDA RRD T+N+++
Sbjct: 93 ITTLRADVETDGRRAKVSFGRDWKLDAERRDFTINALY 130
>gi|304393674|ref|ZP_07375602.1| tRNA-nucleotidyltransferase 1 [Ahrensia sp. R2A130]
gi|303294681|gb|EFL89053.1| tRNA-nucleotidyltransferase 1 [Ahrensia sp. R2A130]
Length = 403
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN-NPNNHKEEVLS 707
DGTV+D G +D+ F+ D RI+EDYLRILR+FRFFA P+ + L
Sbjct: 132 DGTVFDPLGGMQDVLAARVVFIDDATQRIREDYLRILRFFRFFAWYGKFRPDA---DGLR 188
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A DGL +S ER+W EL+K+L +L M +L
Sbjct: 189 ACAREKDGLEGLSAERVWQELSKMLAAPDPVRAVLWMRQTGVL 231
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR DV TDGRHA V F DW+ DA RRDLT+N+++L
Sbjct: 91 VTTLRADVETDGRHATVVFGTDWEADARRRDLTMNALYL 129
>gi|62290437|ref|YP_222230.1| poly(A) polymerase [Brucella abortus bv. 1 str. 9-941]
gi|82700360|ref|YP_414934.1| polynucleotide adenylyltransferase [Brucella melitensis biovar
Abortus 2308]
gi|189024667|ref|YP_001935435.1| polynucleotide adenylyltransferase [Brucella abortus S19]
gi|237815945|ref|ZP_04594942.1| CCA-adding enzyme [Brucella abortus str. 2308 A]
gi|260546972|ref|ZP_05822711.1| polynucleotide adenylyltransferase [Brucella abortus NCTC 8038]
gi|260755270|ref|ZP_05867618.1| polynucleotide adenylyltransferase protein [Brucella abortus bv. 6
str. 870]
gi|260758491|ref|ZP_05870839.1| polynucleotide adenylyltransferase protein [Brucella abortus bv. 4
str. 292]
gi|260762316|ref|ZP_05874659.1| polynucleotide adenylyltransferase protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260884285|ref|ZP_05895899.1| polynucleotide adenylyltransferase [Brucella abortus bv. 9 str.
C68]
gi|297248822|ref|ZP_06932540.1| poly(A) polymerase [Brucella abortus bv. 5 str. B3196]
gi|376272714|ref|YP_005151292.1| poly(A) polymerase [Brucella abortus A13334]
gi|423166385|ref|ZP_17153088.1| hypothetical protein M17_00075 [Brucella abortus bv. 1 str. NI435a]
gi|423171241|ref|ZP_17157916.1| hypothetical protein M19_01774 [Brucella abortus bv. 1 str. NI474]
gi|423172677|ref|ZP_17159348.1| hypothetical protein M1A_00075 [Brucella abortus bv. 1 str. NI486]
gi|423178630|ref|ZP_17165274.1| hypothetical protein M1E_02870 [Brucella abortus bv. 1 str. NI488]
gi|423180672|ref|ZP_17167313.1| hypothetical protein M1G_01772 [Brucella abortus bv. 1 str. NI010]
gi|423183803|ref|ZP_17170440.1| hypothetical protein M1I_01772 [Brucella abortus bv. 1 str. NI016]
gi|423185257|ref|ZP_17171871.1| hypothetical protein M1K_00075 [Brucella abortus bv. 1 str. NI021]
gi|423188392|ref|ZP_17175002.1| hypothetical protein M1M_00074 [Brucella abortus bv. 1 str. NI259]
gi|62196569|gb|AAX74869.1| polyA polymerase family protein [Brucella abortus bv. 1 str. 9-941]
gi|82616461|emb|CAJ11526.1| Polynucleotide adenylyltransferase [Brucella melitensis biovar
Abortus 2308]
gi|189020239|gb|ACD72961.1| Polynucleotide adenylyltransferase [Brucella abortus S19]
gi|237789243|gb|EEP63454.1| CCA-adding enzyme [Brucella abortus str. 2308 A]
gi|260096022|gb|EEW79899.1| polynucleotide adenylyltransferase [Brucella abortus NCTC 8038]
gi|260668809|gb|EEX55749.1| polynucleotide adenylyltransferase protein [Brucella abortus bv. 4
str. 292]
gi|260672748|gb|EEX59569.1| polynucleotide adenylyltransferase protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260675378|gb|EEX62199.1| polynucleotide adenylyltransferase protein [Brucella abortus bv. 6
str. 870]
gi|260873813|gb|EEX80882.1| polynucleotide adenylyltransferase [Brucella abortus bv. 9 str.
C68]
gi|297175991|gb|EFH35338.1| poly(A) polymerase [Brucella abortus bv. 5 str. B3196]
gi|363400320|gb|AEW17290.1| poly(A) polymerase [Brucella abortus A13334]
gi|374538575|gb|EHR10083.1| hypothetical protein M19_01774 [Brucella abortus bv. 1 str. NI474]
gi|374543869|gb|EHR15347.1| hypothetical protein M17_00075 [Brucella abortus bv. 1 str. NI435a]
gi|374544196|gb|EHR15673.1| hypothetical protein M1A_00075 [Brucella abortus bv. 1 str. NI486]
gi|374545411|gb|EHR16874.1| hypothetical protein M1E_02870 [Brucella abortus bv. 1 str. NI488]
gi|374548203|gb|EHR19655.1| hypothetical protein M1G_01772 [Brucella abortus bv. 1 str. NI010]
gi|374548631|gb|EHR20079.1| hypothetical protein M1I_01772 [Brucella abortus bv. 1 str. NI016]
gi|374558954|gb|EHR30343.1| hypothetical protein M1M_00074 [Brucella abortus bv. 1 str. NI259]
gi|374559967|gb|EHR31350.1| hypothetical protein M1K_00075 [Brucella abortus bv. 1 str. NI021]
Length = 423
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G D++ F+GD RI+EDYLRILR+FRFFA + E L A
Sbjct: 136 DGMVIDQVGGLADIETRTLRFIGDAEQRIREDYLRILRFFRFFA--WYGSGRPEAEGLRA 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DG+ +S ERIW+E+ K+LG +L M +L
Sbjct: 194 SARLKDGIAQLSAERIWSEMKKLLGAPDPSRALLWMRQAGVL 235
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T+GRHA+V F DWK DA RRD T+N++++
Sbjct: 95 VTTLRRDIETNGRHAKVAFGTDWKADAERRDFTINALYV 133
>gi|56417163|ref|YP_154237.1| poly (A) polymerase [Anaplasma marginale str. St. Maries]
gi|222475528|ref|YP_002563945.1| poly (A) polymerase (pcnB) [Anaplasma marginale str. Florida]
gi|56388395|gb|AAV86982.1| poly (A) polymerase [Anaplasma marginale str. St. Maries]
gi|222419666|gb|ACM49689.1| poly (A) polymerase (pcnB) [Anaplasma marginale str. Florida]
Length = 419
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T + D+S G +YDYF+G +DL+ F+GD +RI ED+LRILR
Sbjct: 111 EDASRRDFTFNALYCDKS----GKIYDYFSGMQDLENRTVVFIGDAEARINEDFLRILRV 166
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILG 733
FRF A IC+ + EE++ D L +S ERI +E K+L
Sbjct: 167 FRFHASICDK-SPLSEEIIFLCNKYADSLAKLSRERIRSEFFKLLA 211
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ DGRHA V FT W DA+RRD T N+++
Sbjct: 87 ITTLRRDLECDGRHAAVAFTNSWMEDASRRDFTFNALY 124
>gi|239832436|ref|ZP_04680765.1| CCA-adding enzyme [Ochrobactrum intermedium LMG 3301]
gi|444312200|ref|ZP_21147793.1| CCA-adding enzyme [Ochrobactrum intermedium M86]
gi|239824703|gb|EEQ96271.1| CCA-adding enzyme [Ochrobactrum intermedium LMG 3301]
gi|443484452|gb|ELT47261.1| CCA-adding enzyme [Ochrobactrum intermedium M86]
Length = 417
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGT+ D G D++ F+GD RI+EDYLRILR+FRFFA + E L A
Sbjct: 134 DGTIIDDVGGLADIESRTLRFIGDAEQRIREDYLRILRFFRFFA--WYGSGRPEAEGLRA 191
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ER+W+EL K+L +L M +L
Sbjct: 192 SARLKDGLSQLSAERVWSELKKLLSAPDPSRALLWMRQGGVL 233
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ T+GRHA+V F DWK DA RRD T+N+++
Sbjct: 93 VTTLRQDIETNGRHAKVAFGTDWKADAERRDFTINALY 130
>gi|51473228|ref|YP_066985.1| NTP polymerase. [Rickettsia typhi str. Wilmington]
gi|383752002|ref|YP_005427102.1| poly(A) polymerase [Rickettsia typhi str. TH1527]
gi|383842837|ref|YP_005423340.1| poly(A) polymerase [Rickettsia typhi str. B9991CWPP]
gi|51459540|gb|AAU03503.1| NTP polymerase [Rickettsia typhi str. Wilmington]
gi|380758645|gb|AFE53880.1| poly(A) polymerase [Rickettsia typhi str. TH1527]
gi|380759484|gb|AFE54718.1| poly(A) polymerase [Rickettsia typhi str. B9991CWPP]
Length = 387
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYFNG +DL++ F+G +RI+EDYLRILR+FRF + N ++ + A+KN
Sbjct: 135 IYDYFNGFKDLQQAKVVFIGKAFNRIKEDYLRILRFFRFSSYYANQLDDDSFKACKALKN 194
Query: 712 NLDGLHNISGERIWTELNKIL 732
GL +S ERI +E++KI+
Sbjct: 195 ---GLKTLSRERIKSEIDKII 212
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT+D+ DA RRD T+N++
Sbjct: 90 ITTLRKDIECNGRHAKVIFTKDFAEDAARRDFTINAL 126
>gi|347735023|ref|ZP_08867976.1| polyA polymerase family protein [Azospirillum amazonense Y2]
gi|346921857|gb|EGY02430.1| polyA polymerase family protein [Azospirillum amazonense Y2]
Length = 419
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S +DG +YD F G DL G F+GD +RI+ED LR+LR+FRF+AR+ P +
Sbjct: 131 SLTVDGELYDPFGGVPDLTAGRVRFIGDAETRIREDVLRLLRFFRFYARLGKGPPDTA-- 188
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
L A + +SGER+ EL K+L + E+ M+ Q ++
Sbjct: 189 ALDACTRLAPLVGGLSGERVREELLKLLATDRAAEVWRIMVDQGIM 234
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 27/39 (69%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR DV T GR A V FT+DW DA RRD T N+M L
Sbjct: 94 ITTLRQDVETFGRSARVAFTDDWLADAARRDFTFNAMSL 132
>gi|91204980|ref|YP_537335.1| poly(A) polymerase [Rickettsia bellii RML369-C]
gi|157827690|ref|YP_001496754.1| poly(A) polymerase [Rickettsia bellii OSU 85-389]
gi|91068524|gb|ABE04246.1| Poly(A) polymerase [Rickettsia bellii RML369-C]
gi|157802994|gb|ABV79717.1| Poly(A) polymerase [Rickettsia bellii OSU 85-389]
Length = 398
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 36/216 (16%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYFNG EDLK+ F+ RI+EDYLRILR+FRF + N N + +
Sbjct: 133 GKIYDYFNGFEDLKQRKVVFIRAAHQRIKEDYLRILRFFRFSSYYANRLNPEGFKACDEL 192
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL--LLFS----KLK-ATTMRE 762
K+ GL ++S ERI +E ++I+ S S E++ M + L+FS ++K A +
Sbjct: 193 KS---GLMSLSRERIKSEFDRIIVSSNSPEVLKAMFEIGILALIFSIQNYEIKIAEQAKS 249
Query: 763 YIVE------LMKYKEKSELIKDFHKWRLPTFP----------MNGNIIRQF-FARICNN 805
+ +E L+ Y +K +K+F W+ ++ NII +F +I
Sbjct: 250 FNLELSTRYALLLYYQKDLNLKNFLDWKFSKHETIQILSILDFIHKNIITEFDIKKIWLE 309
Query: 806 PNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILG 841
N+KE +L+A NI G+ ++++ K +
Sbjct: 310 HKNYKEYLLTA---------NILGKIDYSQITKFIN 336
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLK-MLEI 855
Q +I N P+ E++LS + K GE +++GGS ++ K +I
Sbjct: 2 QTINKILNIPSKGYEKILSLLNK--------KGEA------RLIGGSVRDALLGKESYDI 47
Query: 856 NMFPHLGTDETFATLDFEGLFRSMPIPFTL-LFSANFFRNLARITTLRIDVTTDGRHAEV 914
++ +L +E + L + +++P +A + +ITTLR D+ +GRHA+V
Sbjct: 48 DIATNLLPNEVTSILS-QAKIKTIPTGLKFGTITAILEKEQFQITTLRKDIECNGRHAKV 106
Query: 915 QFTEDWKLDANRRDLTVNSM 934
FT D+ DA RRD T+N++
Sbjct: 107 VFTNDFAEDAERRDFTINAL 126
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
S+ D L+GK+ +DID ATN P+++ ++ ++ K++T G K GT+ A + +KE F++
Sbjct: 34 SVRDALLGKESYDIDIATNLLPNEVTSILSQAKIKTI-PTGLKFGTITAIL-EKEQFQIT 91
Query: 435 PVK 437
++
Sbjct: 92 TLR 94
>gi|384920488|ref|ZP_10020495.1| polyA polymerase family protein [Citreicella sp. 357]
gi|384465550|gb|EIE50088.1| polyA polymerase family protein [Citreicella sp. 357]
Length = 379
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
D + E+ R T++ D G V D G DL F+GD +RI+EDYLR
Sbjct: 109 DHVEEDATRRDFTMNALYADAR----GHVLDPVGGLPDLTARKVRFIGDARARIREDYLR 164
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILG 733
ILR+FRF A + + LS I + LDGL +S ER+ EL K+LG
Sbjct: 165 ILRFFRFTAWYADPSQGMDPDALSGIADGLDGLETLSAERVGQELLKLLG 214
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V+F++ + DA RRD T+N+++
Sbjct: 89 VTTFRADVQTDGRRAVVRFSDHVEEDATRRDFTMNALY 126
>gi|114328297|ref|YP_745454.1| poly(A) polymerase [Granulibacter bethesdensis CGDNIH1]
gi|114316471|gb|ABI62531.1| poly(A) polymerase [Granulibacter bethesdensis CGDNIH1]
Length = 413
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-----CNNPN 699
S DGT++DYF G +DL+ G FVG R+ ED LR LR+FRF AR P+
Sbjct: 127 SLSPDGTLHDYFGGLDDLRAGRVRFVGQAGRRVAEDRLRALRFFRFQARYGRWEQGTEPD 186
Query: 700 NHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ ++A+ L +S ER+W+EL +IL G ++ M +L
Sbjct: 187 AAAMQAITAMAGE---LTQLSAERVWSELRRILTGPHLAAILAAMEQTGVL 234
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
IT+LR D+ TDGRHAEV FT+DW+ DA RRD T+N+M L
Sbjct: 90 ITSLRRDLATDGRHAEVSFTDDWQEDAARRDFTINAMSL 128
>gi|255004636|ref|ZP_05279437.1| poly (A) polymerase (pcnB) [Anaplasma marginale str. Virginia]
Length = 405
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T + D+S G +YDYF+G +DL+ F+GD +RI ED+LRILR
Sbjct: 97 EDASRRDFTFNALYCDKS----GKIYDYFSGMQDLENRTVVFIGDAEARINEDFLRILRV 152
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILG 733
FRF A IC+ + EE++ D L +S ERI +E K+L
Sbjct: 153 FRFHASICDK-SPLSEEIIFLCNKYADSLAKLSRERIRSEFFKLLA 197
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ DGRHA V FT W DA+RRD T N+++
Sbjct: 73 ITTLRRDLECDGRHAAVAFTNSWMEDASRRDFTFNALY 110
>gi|407973877|ref|ZP_11154788.1| polynucleotide adenylyltransferase [Nitratireductor indicus C115]
gi|407430937|gb|EKF43610.1| polynucleotide adenylyltransferase [Nitratireductor indicus C115]
Length = 420
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D G DL+ F+G+ +RI+EDYLRILR+FRFFA E L A
Sbjct: 135 GEIVDLVGGVADLESRTLRFIGEAETRIREDYLRILRFFRFFA--WYGRGRPDAEGLKAS 192
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ER+W+EL K+LG +L M +L
Sbjct: 193 ARLKDGLEKLSAERVWSELRKLLGAPDPSRALLWMRQTGVL 233
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGR A V F DW+ DA RRD T+N+++
Sbjct: 93 VTTLRSDVATDGRRASVTFGRDWQRDAERRDFTINALY 130
>gi|67458411|ref|YP_246035.1| poly(A) polymerase [Rickettsia felis URRWXCal2]
gi|67003944|gb|AAY60870.1| Poly(A) polymerase [Rickettsia felis URRWXCal2]
Length = 385
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N N+ + A+K
Sbjct: 135 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLNDGSFKACKALK- 193
Query: 712 NLDGLHNISGERIWTELNKIL 732
DGL +S ERI +E++KI+
Sbjct: 194 --DGLKTLSRERIKSEMDKII 212
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 90 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 126
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
+ D L+ K +DID ATN TPD++ + ++ K++T G K GT+ A +N+ E FE+
Sbjct: 34 CVRDALLEKDSYDIDIATNLTPDEVINILSKAKIKTI-PTGLKFGTITAILNE-EKFEIT 91
Query: 435 PVK 437
++
Sbjct: 92 TLR 94
>gi|242089519|ref|XP_002440592.1| hypothetical protein SORBIDRAFT_09g003680 [Sorghum bicolor]
gi|241945877|gb|EES19022.1| hypothetical protein SORBIDRAFT_09g003680 [Sorghum bicolor]
Length = 398
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
K+ + + ES + Q DYK F PS DWD + ++ + PV SA+C + K ++
Sbjct: 226 KIDIIEEESKGFFMQKDYKMFPPSVDWDNIVWSTRKPQMDYPVQSAVC--SLEDKSAVKP 283
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTR-----HWGWTLWRA 363
Q+ V GYA SGGG+ I RVD++ D G++W A+ + +T W W L++A
Sbjct: 284 GQVTVAGYALSGGGRGIERVDISPDGGKSWIEAHRYQKHDVPYVTSDISCDKWAWVLFKA 343
Query: 364 TIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ V T VS +D + N P+ +++++
Sbjct: 344 VVNVKGDTVIVS----------KAVDSSANVQPESVESIW 373
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
I SKAVDSS N QPES +IWNLRG+L+ +HRV +
Sbjct: 353 IVSKAVDSSANVQPESVESIWNLRGILNTCWHRVHL 388
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHV 479
CA E + V+G+ W A+GNATW GA+L DVL+ + + A +HV
Sbjct: 100 CAGNRRTEMSRSRKVRGVGWDVCALGNATWGGAKLSDVLQLVCVPYHTEITMAGGKHV 157
>gi|347760242|ref|YP_004867803.1| poly(A) polymerase [Gluconacetobacter xylinus NBRC 3288]
gi|347579212|dbj|BAK83433.1| poly(A) polymerase [Gluconacetobacter xylinus NBRC 3288]
Length = 412
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ D + G V+DYF G DL G FVG +RI ED LRILR+
Sbjct: 117 EDAARRDFTINAMSCDSA----GVVHDYFGGKADLAAGRVRFVGAARTRIAEDALRILRF 172
Query: 688 FRFFARICNN-PNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
FRF AR + P+ ++A+ +D +S ER+W+EL +IL G + +M
Sbjct: 173 FRFQARYGHGAPDAEAMAAVTALAGMID---RLSVERVWSELRRILVGPHVVLTLGQMAG 229
Query: 747 QNLLL 751
+L+
Sbjct: 230 CGVLV 234
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D TDGRHA V +T DW+ DA RRD T+N+M
Sbjct: 93 ITTLRRDEETDGRHATVAWTHDWREDAARRDFTINAM 129
>gi|334358911|ref|NP_001229289.1| CCA tRNA nucleotidyltransferase 1, mitochondrial isoform b [Mus
musculus]
gi|74189230|dbj|BAE22664.1| unnamed protein product [Mus musculus]
Length = 215
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFEV
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHE-ENFEVT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLRIDVTTDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 VTTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 69/174 (39%), Gaps = 56/174 (32%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSVQDKDRSFRLDGT-------- 651
E +A + N+ EK I EN L + V R ++ T
Sbjct: 90 KEMFQSAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGRHAEVEFTTDWQKDAE 149
Query: 652 ----------------VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFR 689
++DYFNG+ DLK FVG RIQEDYLRILRYFR
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFR 203
>gi|88607181|ref|YP_505747.1| polyA polymerase/tRNA nucleotidyltransferase family protein
[Anaplasma phagocytophilum HZ]
gi|88598244|gb|ABD43714.1| polyA polymerase/tRNA nucleotidyltransferase family protein
[Anaplasma phagocytophilum HZ]
Length = 409
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G +YDYF G DL+ AF+GD RI ED+LRILR FRF A IC++ + EE+++
Sbjct: 128 NGKIYDYFTGIRDLQSRTVAFIGDAEQRINEDFLRILRVFRFHASICSD-SALSEEIINV 186
Query: 709 IKNNLDGLHNISGERIWTELNKILG 733
+ L +S ERI +E K+L
Sbjct: 187 CSKHARKLALLSKERIRSEFFKLLA 211
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR+D DGRHA V FT++W+ DA+RRD T N+++
Sbjct: 87 ITTLRLDTKCDGRHASVVFTDNWEADASRRDFTFNALY 124
>gi|294461442|gb|ADE76282.1| unknown [Picea sitchensis]
Length = 398
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
K+ ++ +E + Q DYK F P+ DWD + + + + PV AIC + D
Sbjct: 224 KIEVNANECQGFFMQKDYKMFPPTVDWDNIKWPSRRPLMDFPVNCAIC-SLEDVSSAEWG 282
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQD-----SQAPLTRHWGWTLWRA 363
++ ++GYA+SGGG+ I RVDV++D G+TW A ++ S W W L+
Sbjct: 283 KKVIIRGYAFSGGGRGIERVDVSVDGGKTWVEARRYQKEGVPYVSDTEDCDKWAWVLFEL 342
Query: 364 TIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ P T D+++ +D A N P++++ ++
Sbjct: 343 QTEIHPPT------DIIV----KAVDSAANVQPEKVETIW 372
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 478 HVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEIWSKAVDSS 528
H +I KAVDS+ N QPE IWNLRGVL+N++H V V +K + S+
Sbjct: 347 HPPTDIIVKAVDSAANVQPEKVETIWNLRGVLNNSWHVVHVNNAAKKISSN 397
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 434 KPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
+ VKG+ W A+GNA W GARL DVLK A + ++ A +HV
Sbjct: 110 RTVKGVGWDIGALGNAVWGGARLSDVLKLAKVPEYTAVTEAGGRHVE 156
>gi|254781115|ref|YP_003065528.1| poly(A) polymerase protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040792|gb|ACT57588.1| poly(A) polymerase protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 416
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 92/193 (47%), Gaps = 33/193 (17%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V DY G DL+ F+GD RI EDYLRILR+FRFFA N + ++++I
Sbjct: 133 GKVIDYVGGLNDLRNRTIKFIGDAHHRILEDYLRILRFFRFFAHY-GEKNIDSDGLVASI 191
Query: 710 KNNLDGLHNISGERIWTELNKIL--------------GGSFSKEMMLKMLYQNLLLFSKL 755
K GL +S ERIW+E+NK+L GG F KE+ L + +L S++
Sbjct: 192 KAK-KGLKILSSERIWSEINKLLEAKNPLNAIVHMYNGGIF-KEIFLDVQEISLDQLSQV 249
Query: 756 ---------KATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNP 806
K ++ +IV L+ +++K ++ K+ LP IR F N
Sbjct: 250 IEAEQVFEWKIDSLLRFIV-LISWQDKKSILSMAKKFSLP------REIRYFLISFFNCN 302
Query: 807 NNHKEEVLSAIKK 819
N K + IKK
Sbjct: 303 FNQKTLSIPEIKK 315
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ TDGR+A+V FT DWK D+ RRD T+N+++
Sbjct: 91 ITTLRSDLITDGRYAKVVFTRDWKADSLRRDFTINALY 128
>gi|99082731|ref|YP_614885.1| polynucleotide adenylyltransferase [Ruegeria sp. TM1040]
gi|99039011|gb|ABF65623.1| Polynucleotide adenylyltransferase region [Ruegeria sp. TM1040]
Length = 386
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVL 706
R G + D +G EDL+ F+GD RIQEDYLRILRYFRF + + E L
Sbjct: 128 RPTGEIVDPLSGFEDLRARRVRFIGDATRRIQEDYLRILRYFRFHSWYGDAEAGFDPEAL 187
Query: 707 SAIKNNLDGLHNISGERIWTELNKILGGS 735
+AI +GL ++S ER+ E+ K+L S
Sbjct: 188 AAIAATQEGLDHLSRERVGAEIMKLLSSS 216
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGR A V F + DA RRD T+N+++
Sbjct: 89 ITTFRRDVATDGRRAVVAFATEILEDARRRDFTMNALY 126
>gi|357032581|ref|ZP_09094516.1| poly(A) polymerase/t-RNA nucleotidyltransferase [Gluconobacter
morbifer G707]
gi|356413572|gb|EHH67224.1| poly(A) polymerase/t-RNA nucleotidyltransferase [Gluconobacter
morbifer G707]
Length = 380
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 25/186 (13%)
Query: 584 TPEL-KRLAGIFEKHGYQLRIAG--EGTVTA-------KVLSYRNRREKEDRIG------ 627
TPE +R+ + E G ++ G GTVTA ++ + R E + R
Sbjct: 34 TPEPPERVQELLEAAGIRVIPTGMDHGTVTALISHVPYEITTLRRDEETDGRHAVVAWTG 93
Query: 628 ---ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRI 684
E+ R T++ DR ++DYF+G EDLK FVG P R++ED LR
Sbjct: 94 NWEEDAARRDFTINAMSLDRH----DVLHDYFHGMEDLKAHRVRFVGMPAQRVREDALRA 149
Query: 685 LRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
LR+FRF AR + E +AI +LD + +S ER+ E+ KIL G E + M
Sbjct: 150 LRFFRFDARYGQGVPD--PEACAAISASLDLVRALSAERVAQEILKILAGPRLLETLAGM 207
Query: 745 LYQNLL 750
LL
Sbjct: 208 EAVGLL 213
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR D TDGRHA V +T +W+ DA RRD T+N+M L
Sbjct: 73 ITTLRRDEETDGRHAVVAWTGNWEEDAARRDFTINAMSL 111
>gi|381168934|ref|ZP_09878115.1| tRNA nucleotidyltransferase/poly(A) polymerase [Phaeospirillum
molischianum DSM 120]
gi|380681950|emb|CCG42935.1| tRNA nucleotidyltransferase/poly(A) polymerase [Phaeospirillum
molischianum DSM 120]
Length = 442
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YD FNG DL G FVG+PV RI+ED LR+LR+FRF A K L+A
Sbjct: 153 GRIYDPFNGLADLGAGRVCFVGNPVHRIEEDTLRLLRFFRFQAFYGRGAACDK-SALAAC 211
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
+ L ++SGER+ +EL ++LG ++L M
Sbjct: 212 RQLAPRLVDLSGERVASELLRLLGSDDPATILLVM 246
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV TDGRHA V FT+DW DA RRD T N+M
Sbjct: 111 ITTLRRDVATDGRHASVVFTDDWVADAARRDFTFNAM 147
>gi|255003514|ref|ZP_05278478.1| poly (A) polymerase (pcnB) [Anaplasma marginale str. Puerto Rico]
Length = 405
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYF+G +DL+ F+GD +RI ED+LRILR FRF A IC+ + EE++
Sbjct: 115 GKIYDYFSGMQDLENRTVVFIGDAEARINEDFLRILRVFRFHASICDK-SPLSEEIIFLC 173
Query: 710 KNNLDGLHNISGERIWTELNKILG 733
D L +S ERI +E K+L
Sbjct: 174 NKYADSLAKLSRERIRSEFFKLLA 197
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ DGRHA V FT W DA+RRD T N+++
Sbjct: 73 ITTLRRDLECDGRHAAVAFTNSWMEDASRRDFTFNALY 110
>gi|45359347|gb|AAS58929.1| polyA polymerase [Rickettsia aeschlimannii]
Length = 115
Score = 75.1 bits (183), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 18 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGNFKACKALK- 76
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ERI +E++KI+ + +++ M +L
Sbjct: 77 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMFEIGIL 113
>gi|45359341|gb|AAS58926.1| polyA polymerase [Rickettsia africae]
gi|45359343|gb|AAS58927.1| polyA polymerase [Rickettsia slovaca 13-B]
Length = 115
Score = 75.1 bits (183), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 18 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGNFKACKALK- 76
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ERI +E++KI+ + +++ M +L
Sbjct: 77 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMFEIGIL 113
>gi|45359345|gb|AAS58928.1| polyA polymerase [Rickettsia sibirica subsp. mongolitimonae HA-91]
Length = 115
Score = 75.1 bits (183), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 18 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGSFKACKALK- 76
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ERI +E++KI+ + +++ M +L
Sbjct: 77 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMFEIGIL 113
>gi|58617624|ref|YP_196823.1| poly(A) polymerase [Ehrlichia ruminantium str. Gardel]
gi|58417236|emb|CAI28349.1| Poly(A) polymerase [Ehrlichia ruminantium str. Gardel]
Length = 397
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G VYDYF+G +DLK F+GDP +RIQEDYLRILR FRF A IC + N + ++ +
Sbjct: 129 GIVYDYFSGIQDLKNKQLNFIGDPETRIQEDYLRILRAFRFHAAIC-SQNKLSDIIIQSC 187
Query: 710 KNNLDGLHNISGERIWTELNKILG 733
+ +S ERI E K+L
Sbjct: 188 TKYASCISKLSRERIRDEFFKLLS 211
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
ITTLR D+ DGRHAEV+FT +W+ DA+RRD T N+++ K
Sbjct: 87 ITTLRSDIYCDGRHAEVKFTNNWQQDASRRDFTFNALYCDEK 128
>gi|376261985|ref|YP_005148705.1| tRNA nucleotidyltransferase/poly(A) polymerase [Clostridium sp.
BNL1100]
gi|373945979|gb|AEY66900.1| tRNA nucleotidyltransferase/poly(A) polymerase [Clostridium sp.
BNL1100]
Length = 448
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 596 KHGYQLRIAGEGTVTAKVLSYRNRREKEDRIGENQPFRK-----LTLSVQDK--DRSFRL 648
KHG +AGE ++ +V +YR G+ + FR+ T S+++ R F +
Sbjct: 70 KHGTVTVLAGE--MSLEVTTYRID-------GDYKDFRRPEKVEFTSSLREDLARRDFTI 120
Query: 649 DGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNH 701
+ Y D+F G +DLKK V VGDP R +ED LR++R RF A++ +
Sbjct: 121 NAMAYHPEHGLVDFFGGLQDLKKQVIKAVGDPEQRFREDALRMMRAIRFSAQLGFSI--- 177
Query: 702 KEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMR 761
+E AIKNN + NIS ERI ELNK L + +N L F+ L T +
Sbjct: 178 EEATFEAIKNNSALIANISSERIRDELNKTL------------VSENPLHFNYLHQTGLL 225
Query: 762 EYIVELMKYKEKSELIKDFHKWRLPTFPM 790
YI+ + K+E I +H + + M
Sbjct: 226 PYILPEFERCYKTEQINPYHVYNVADHTM 254
>gi|268610303|ref|ZP_06144030.1| poly A polymerase family protein [Ruminococcus flavefaciens FD-1]
Length = 439
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 626 IGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRIL 685
I E+ R T++ DR G + D F G ED++ G+ VGDPV R ED LRI+
Sbjct: 104 ITEDLARRDFTMNAIAMDRH----GNIADPFGGKEDIENGIIRCVGDPVQRFTEDALRIM 159
Query: 686 RYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLK 743
R RF A++ + E + ++K L NIS ERI +EL+KIL G + E++L+
Sbjct: 160 RAVRFAAQLGFSIEEKTAEAVHSMKER---LKNISMERIRSELDKILCGRYCVEVLLE 214
>gi|254466149|ref|ZP_05079560.1| polyA polymerase family protein [Rhodobacterales bacterium Y4I]
gi|206687057|gb|EDZ47539.1| polyA polymerase family protein [Rhodobacterales bacterium Y4I]
Length = 383
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 49/86 (56%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVL 706
R DG + D G DL K F+G RI+EDYLR LRYFRF A + + L
Sbjct: 128 RPDGEIVDPLGGLADLTKRRVRFIGTAEHRIREDYLRSLRYFRFHAWYGDQAEGFDPDAL 187
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
+AI NLDGL ++S ER+ EL K+L
Sbjct: 188 AAISANLDGLASLSKERVGAELVKLL 213
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGR A V F+ D DA RRD T+N+++
Sbjct: 89 ITTFRKDVATDGRRAVVAFSTDIAEDARRRDFTMNAIY 126
>gi|348672281|gb|EGZ12101.1| hypothetical protein PHYSODRAFT_317364 [Phytophthora sojae]
Length = 242
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 39 WVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGNIS 98
WVV+R GVYD+TEF HPGG I++A G S+E FW H + V E LE R+GN+S
Sbjct: 7 WVVYRHGVYDVTEFAGAHPGGNKILRATGKSLELFWQQSEPHSRAGVPETLEELRVGNLS 66
Query: 99 QED 101
+ED
Sbjct: 67 EED 69
>gi|239948431|ref|ZP_04700184.1| poly(A) polymerase [Rickettsia endosymbiont of Ixodes scapularis]
gi|239922707|gb|EER22731.1| poly(A) polymerase [Rickettsia endosymbiont of Ixodes scapularis]
Length = 436
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGSFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 139 ITTLRKDIECNGRHAKVVFTNDFAEDAARRDFTINAL 175
>gi|404318663|ref|ZP_10966596.1| polynucleotide adenylyltransferase [Ochrobactrum anthropi CTS-325]
Length = 415
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG+V D G D++ F+GD RI+EDYLRILR+FRFFA + E L A
Sbjct: 132 DGSVIDDVGGLGDIESRTLRFIGDAEQRIREDYLRILRFFRFFA--WYGSGRPEAEGLRA 189
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ER+W+EL K+L +L M +L
Sbjct: 190 SARLKDGLSQLSAERVWSELKKLLSAPDPSRALLWMRQAGVL 231
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T+GRHA+V F DWK DA RRD T+N++++
Sbjct: 91 VTTLRQDIETNGRHAKVAFGTDWKADAERRDFTINALYV 129
>gi|383312026|ref|YP_005364827.1| poly(A) polymerase [Candidatus Rickettsia amblyommii str. GAT-30V]
gi|378930686|gb|AFC69195.1| poly(A) polymerase [Candidatus Rickettsia amblyommii str. GAT-30V]
Length = 436
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGSFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GR+A+V FT D+ DA RRD T+N++
Sbjct: 139 ITTLRKDIECNGRYAKVIFTNDFAEDAARRDFTINAL 175
>gi|157827883|ref|YP_001494125.1| poly(A) polymerase [Rickettsia rickettsii str. 'Sheila Smith']
gi|165932572|ref|YP_001649361.1| poly(A) polymerase [Rickettsia rickettsii str. Iowa]
gi|378720689|ref|YP_005285576.1| poly(A) polymerase [Rickettsia rickettsii str. Colombia]
gi|378722040|ref|YP_005286926.1| poly(A) polymerase [Rickettsia rickettsii str. Arizona]
gi|379017047|ref|YP_005293282.1| poly(A) polymerase [Rickettsia rickettsii str. Brazil]
gi|379017188|ref|YP_005293422.1| poly(A) polymerase [Rickettsia rickettsii str. Hino]
gi|157800364|gb|ABV75617.1| poly(A) polymerase [Rickettsia rickettsii str. 'Sheila Smith']
gi|165907659|gb|ABY71955.1| poly(A) polymerase [Rickettsia rickettsii str. Iowa]
gi|376325571|gb|AFB22811.1| poly(A) polymerase [Rickettsia rickettsii str. Brazil]
gi|376325713|gb|AFB22952.1| poly(A) polymerase [Rickettsia rickettsii str. Colombia]
gi|376327064|gb|AFB24302.1| poly(A) polymerase [Rickettsia rickettsii str. Arizona]
gi|376329753|gb|AFB26989.1| poly(A) polymerase [Rickettsia rickettsii str. Hino]
Length = 436
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGSFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 139 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 175
>gi|379018523|ref|YP_005294757.1| poly(A) polymerase [Rickettsia rickettsii str. Hlp#2]
gi|376331103|gb|AFB28337.1| poly(A) polymerase [Rickettsia rickettsii str. Hlp#2]
Length = 436
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGSFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 139 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 175
>gi|157825180|ref|YP_001492900.1| Poly(A) polymerase [Rickettsia akari str. Hartford]
gi|157799138|gb|ABV74392.1| Poly(A) polymerase [Rickettsia akari str. Hartford]
Length = 385
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 135 IYDYFEGFKDLRQEKVVFIGEALDRIKEDYLRILRFFRFSSYYTNQLDDGIFKACKALK- 193
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
DGL +S ERI +E++KI+ E +LK +++
Sbjct: 194 --DGLKTLSRERIKSEMDKIIVSK-RAEQILKAMFE 226
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT+D+ DA RRD T+N++
Sbjct: 90 ITTLRKDIECNGRHAKVVFTDDFAEDAARRDFTINAL 126
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
+ D L+ K +DID ATN PD++ + + ++T + G K GT+ A +N+ E FE+
Sbjct: 34 CVRDALLEKSSYDIDIATNLIPDEVTNILLKANIKTI-QTGLKFGTITAILNN-EQFEIT 91
Query: 435 PVK 437
++
Sbjct: 92 TLR 94
>gi|379711761|ref|YP_005300100.1| poly(A) polymerase [Rickettsia philipii str. 364D]
gi|376328406|gb|AFB25643.1| poly(A) polymerase [Rickettsia philipii str. 364D]
Length = 436
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGSFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 881 IPFTLLF---SANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
IP L F +AN ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 119 IPTGLKFGTITANLNNEKFEITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 175
>gi|378723398|ref|YP_005288282.1| poly(A) polymerase [Rickettsia rickettsii str. Hauke]
gi|376332413|gb|AFB29646.1| poly(A) polymerase [Rickettsia rickettsii str. Hauke]
Length = 390
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 166 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGSFKACKALK- 224
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 225 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 256
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 121 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 157
>gi|238650332|ref|YP_002916184.1| poly(A) polymerase [Rickettsia peacockii str. Rustic]
gi|238624430|gb|ACR47136.1| poly(A) polymerase [Rickettsia peacockii str. Rustic]
Length = 408
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGSFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 139 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 175
>gi|374318785|ref|YP_005065283.1| Poly(A) polymerase [Rickettsia slovaca 13-B]
gi|383750660|ref|YP_005425761.1| poly(A) polymerase [Rickettsia slovaca str. D-CWPP]
gi|360041333|gb|AEV91715.1| Poly(A) polymerase [Rickettsia slovaca 13-B]
gi|379773674|gb|AFD19030.1| poly(A) polymerase [Rickettsia slovaca str. D-CWPP]
Length = 436
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGNFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 139 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 175
>gi|15891938|ref|NP_359652.1| poly(A) polymerase [Rickettsia conorii str. Malish 7]
gi|15619048|gb|AAL02553.1| poly(A) polymerase [Rickettsia conorii str. Malish 7]
Length = 436
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGNFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 139 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 175
>gi|383482837|ref|YP_005391751.1| poly(A) polymerase [Rickettsia montanensis str. OSU 85-930]
gi|378935191|gb|AFC73692.1| poly(A) polymerase [Rickettsia montanensis str. OSU 85-930]
Length = 436
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGSFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 139 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 175
>gi|82621174|gb|ABB86275.1| sulfite oxidase-like [Solanum tuberosum]
Length = 393
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQ 314
E + Q DYK F P+ +WD ++++ + PV SAIC + D + +++ ++ ++
Sbjct: 230 EECQGFFMQKDYKMFPPTVNWDNINWSTRRPQMDFPVQSAIC-SLEDVSV-VKHGKITIK 287
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVAN--------FTGQDSQAPLTRHWGWTLWRATIP 366
GYA SGGG+ I RVDV+ID G+TW A + DS + W W + A
Sbjct: 288 GYAVSGGGRGIERVDVSIDGGKTWEEATRYQRTGVPYIADDSS---SDRWAWVFFEAEAN 344
Query: 367 VDPKTKEV--SIMDMLMGKKPHDIDFATN 393
+ P++ E+ +D+ +P ID N
Sbjct: 345 I-PQSAEIVAKAVDISANVQPESIDSVWN 372
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
EI +KAVD S N QPES ++WNLRG+L+ ++HRV V +
Sbjct: 350 EIVAKAVDISANVQPESIDSVWNLRGILNTSWHRVHVRV 388
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA + + VKG+ W AA+GNA W GA+L DVL+ GI S+ + +HV
Sbjct: 98 CAGNRRTAMSKSRTVKGVGWDIAALGNAVWGGAKLADVLELVGIPYLTSITQSGGKHVE 156
>gi|383483358|ref|YP_005392271.1| poly(A) polymerase [Rickettsia parkeri str. Portsmouth]
gi|378935712|gb|AFC74212.1| poly(A) polymerase [Rickettsia parkeri str. Portsmouth]
Length = 436
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGNFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 139 ITTLRKDIECNGRHAKVIFTNDFAEDATRRDFTINAL 175
>gi|229586245|ref|YP_002844746.1| Poly(A) polymerase [Rickettsia africae ESF-5]
gi|228021295|gb|ACP53003.1| Poly(A) polymerase [Rickettsia africae ESF-5]
Length = 436
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGNFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 139 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 175
>gi|254510915|ref|ZP_05122982.1| polyA polymerase family protein [Rhodobacteraceae bacterium KLH11]
gi|221534626|gb|EEE37614.1| polyA polymerase family protein [Rhodobacteraceae bacterium KLH11]
Length = 384
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
D++ E+ R T++ R DGT+ D +G DL+ F+G+ RI+EDYLR
Sbjct: 110 DKVEEDAARRDFTMNAL----YARPDGTILDPLDGLRDLQARRVRFIGEAEKRIREDYLR 165
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
LRYFRF A + + L AI NLDGL +S ER+ E+ K+L
Sbjct: 166 SLRYFRFHAWYGDADAGFDADALGAIAANLDGLETLSRERVGAEMLKLLAA 216
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F++ + DA RRD T+N+++
Sbjct: 90 VTTFRRDVETDGRRAVVAFSDKVEEDAARRDFTMNALY 127
>gi|379713124|ref|YP_005301462.1| poly(A) polymerase [Rickettsia massiliae str. AZT80]
gi|376333770|gb|AFB31002.1| poly(A) polymerase [Rickettsia massiliae str. AZT80]
Length = 418
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 166 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGNFKACKALK- 224
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 225 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 256
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 121 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 157
>gi|383480965|ref|YP_005389880.1| poly(A) polymerase [Rickettsia rhipicephali str. 3-7-female6-CWPP]
gi|378933304|gb|AFC71807.1| poly(A) polymerase [Rickettsia rhipicephali str. 3-7-female6-CWPP]
Length = 417
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 165 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGNFKACKALK- 223
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 224 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 255
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 120 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 156
>gi|45359339|gb|AAS58925.1| polyA polymerase [Rickettsia conorii]
Length = 115
Score = 74.3 bits (181), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF N ++ + A+K
Sbjct: 18 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSCYYANQLDDGNFKACKALK- 76
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ERI +E++KI+ + +++ M +L
Sbjct: 77 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMFEIGIL 113
>gi|393723789|ref|ZP_10343716.1| Polynucleotide adenylyltransferase region [Sphingomonas sp. PAMC
26605]
Length = 407
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++DYF G +DL F+GDP+ RI ED+LRILR+FRF AR + P+ L A
Sbjct: 137 GEIFDYFGGLDDLAARRVRFIGDPLQRIAEDHLRILRFFRFHARFGDVPDAAG---LDAC 193
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL 751
+ L +S ERI E K+L + + M+ + +LL
Sbjct: 194 TQRANDLMALSRERISAEFLKLLVAPNAVATLALMVERGILL 235
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D TDGRHA V FT+DW+ DA RRD T+N+++
Sbjct: 94 VTTLRRDTATDGRHATVAFTDDWREDAARRDFTINALY 131
>gi|383500966|ref|YP_005414325.1| poly(A) polymerase [Rickettsia australis str. Cutlack]
gi|378931977|gb|AFC70482.1| poly(A) polymerase [Rickettsia australis str. Cutlack]
Length = 385
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N + +++ A K
Sbjct: 135 IYDYFEGFKDLQQENVVFIGEALDRIKEDYLRILRFFRFSSYYANQLD---DDIFKACKA 191
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 192 LKDGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 225
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT+D+ DA RRD T+N++
Sbjct: 90 ITTLRKDIECNGRHAKVVFTDDFAEDAARRDFTINAL 126
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
+ D L+ K +DID ATN PD++ + + ++T + G K GT+ A +N KE FE+
Sbjct: 34 CVRDALLEKSSYDIDIATNLIPDEVTNILLKANIKTI-QTGLKFGTITAILN-KEKFEIT 91
Query: 435 PVK 437
++
Sbjct: 92 TLR 94
>gi|417859328|ref|ZP_12504384.1| poly(A) polymerase [Agrobacterium tumefaciens F2]
gi|338822392|gb|EGP56360.1| poly(A) polymerase [Agrobacterium tumefaciens F2]
Length = 418
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D +G D++ G F+GD RI EDYLRILR+FRFFA + + + L A
Sbjct: 133 GEIIDLIDGLPDIETGTVRFIGDAAMRISEDYLRILRFFRFFAHYGSGRPDA--DGLRAS 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L +S ER+W+EL K+L +L M +L
Sbjct: 191 ARAKDKLATLSAERVWSELKKLLAARDPSRALLWMRQSGVL 231
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 17/118 (14%)
Query: 830 ERIWTELN------KILGGSFSKEMMLK-MLEINMFPHLGTDETFATLDFEGLFRSMPIP 882
+RI+T LN +I+GG+ +M + +++++M L D G+ +S+P
Sbjct: 16 KRIFTLLNADGGEVRIVGGAVRNALMEQPVVDVDMATTLTPDVVVERAKAAGI-KSVPTG 74
Query: 883 F-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
TL+ F +TTLR DV T+GRHA+V F DW+ DA RRDLT+N+++
Sbjct: 75 IEHGTVTLVIDGEGFE----VTTLRRDVETNGRHAQVAFGTDWQTDAERRDLTINALY 128
>gi|395824759|ref|XP_003785623.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial
[Otolemur garnettii]
Length = 234
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK MF +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLNGVKPQDVDFATTATPAQMKEMFQAAGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRIDVLTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 66/175 (37%), Gaps = 56/175 (32%)
Query: 572 MKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG-------------------------- 605
MKL SPEF S FT LK L +F K ++LRIAG
Sbjct: 30 MKLQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDVDFATTATPAQM 89
Query: 606 -EGTVTAKVLSYRNRREKEDRIG-----ENQPFRKLTLSVQDKDRSFRLDGT-------- 651
E A + N+ EK I EN L + V R ++ T
Sbjct: 90 KEMFQAAGIRMINNKGEKHGTITARLHEENFEITTLRIDVLTDGRHAEVEFTTDWQKDAE 149
Query: 652 ----------------VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRF 690
++DYFNG+ DLK FVG RIQEDYL + RY RF
Sbjct: 150 RRDLTINSMFLGFDGTLFDYFNGYADLKNKKVKFVGHAKQRIQEDYLHVTRYIRF 204
>gi|157964083|ref|YP_001498907.1| Poly(A) polymerase [Rickettsia massiliae MTU5]
gi|157843859|gb|ABV84360.1| Poly(A) polymerase [Rickettsia massiliae MTU5]
Length = 418
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 166 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGNFKACKALK- 224
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 225 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 256
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 121 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 157
>gi|395786715|ref|ZP_10466442.1| hypothetical protein ME5_01760 [Bartonella tamiae Th239]
gi|423716391|ref|ZP_17690581.1| hypothetical protein MEG_00121 [Bartonella tamiae Th307]
gi|395423013|gb|EJF89209.1| hypothetical protein ME5_01760 [Bartonella tamiae Th239]
gi|395429320|gb|EJF95388.1| hypothetical protein MEG_00121 [Bartonella tamiae Th307]
Length = 422
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
GT+YD G D++K + F+GDP RI+EDYLRILR+FRFFA E L A
Sbjct: 140 GTLYDSVGGIIDIEKRLLRFIGDPDERIKEDYLRILRFFRFFA--WYGQGRPDAEGLKAC 197
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
+GL ++S ERIW EL +L
Sbjct: 198 SRLKEGLASLSSERIWMELKNLL 220
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR+DV TDGRHA+V F DW +DA RRD T+N++++
Sbjct: 98 VTTLRLDVETDGRHAKVIFGRDWLIDAKRRDFTMNALYV 136
>gi|257125451|ref|YP_003163565.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Leptotrichia buccalis C-1013-b]
gi|257049390|gb|ACV38574.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Leptotrichia buccalis C-1013-b]
Length = 588
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+ D + G +D+K+ V FVG P RI+ED LRILR FRF +++ N + E AI N
Sbjct: 128 IVDLYGGKQDIKRKVIRFVGKPKLRIEEDALRILRAFRFISKLGFNLDKKTAE---AICN 184
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
L IS ERI+ EL+KIL G+F+K+ +++M
Sbjct: 185 KRKFLTKISKERIFDELSKILMGNFAKKALIEM 217
>gi|350273066|ref|YP_004884379.1| poly(A) polymerase [Rickettsia japonica YH]
gi|348592279|dbj|BAK96240.1| poly(A) polymerase [Rickettsia japonica YH]
Length = 436
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 184 IYDYFEGFKDLQQEKVIFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGSFKACKALK- 242
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 243 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 274
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA++ FT D+ DA RRD T+N++
Sbjct: 139 ITTLRKDIECNGRHAKIIFTNDFAEDAARRDFTINAL 175
>gi|224060247|ref|XP_002300104.1| predicted protein [Populus trichocarpa]
gi|222847362|gb|EEE84909.1| predicted protein [Populus trichocarpa]
Length = 393
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 25/158 (15%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQ 314
ES + Q DYK F PS +WD ++++ + PV SAIC + ++ +++V
Sbjct: 230 EESQGFFMQKDYKMFPPSVNWDNINWSTRRPQMDFPVQSAIC--SLEDVTAIKPGKVKVS 287
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH---------WGWTLWRATI 365
GYA SGGG+ I RVDV++D G+TW A+ Q P ++ W W L+ T+
Sbjct: 288 GYAASGGGRGIDRVDVSVDGGKTWVEAS----RYQKPGVQYISDDMNSDKWAWVLFDVTV 343
Query: 366 PVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
P++ E+ + +D A N P+ ++ ++
Sbjct: 344 DA-PQSTEIVV---------KAVDSAANVQPENVQEIW 371
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
EI KAVDS+ N QPE+ IWNLRG+L+ ++HRV+V +
Sbjct: 350 EIVVKAVDSAANVQPENVQEIWNLRGILNTSWHRVQVRV 388
Score = 46.6 bits (109), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA +VK VKG+ W +A+GN W GA+L DVL+ GIS S + +HV
Sbjct: 98 CAGNRRTAMSKVKTVKGVGWDVSAIGNGVWGGAKLADVLELVGISKLTSTTKSGGKHVE 156
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 114 YVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTP 148
Y+ EP R P L+ S P+NAEPP S L+ +++TP
Sbjct: 10 YLQEPPRHPSLQINSKYPFNAEPPRSALISSYVTP 44
>gi|341583240|ref|YP_004763731.1| poly(A) polymerase [Rickettsia heilongjiangensis 054]
gi|340807466|gb|AEK74054.1| poly(A) polymerase [Rickettsia heilongjiangensis 054]
Length = 435
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 183 IYDYFEGFKDLQQEKVIFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGSFKACKALK- 241
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 242 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 273
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA++ FT D+ DA RRD T+N++
Sbjct: 138 ITTLRKDIECNGRHAKIIFTNDFAEDAARRDFTINAL 174
>gi|114769866|ref|ZP_01447476.1| Poly A polymerase family protein [Rhodobacterales bacterium
HTCC2255]
gi|114549571|gb|EAU52453.1| Poly A polymerase family protein [alpha proteobacterium HTCC2255]
Length = 383
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG + D NG +DLKK F+ DP RI EDYLRILR+FRF A + E LSA
Sbjct: 130 DGIIIDPLNGMKDLKKRHVRFIKDPNKRIIEDYLRILRFFRFTAEYGDPDLGIDAEGLSA 189
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
N+DG+ ++ ER+ +E+ KIL
Sbjct: 190 CAANIDGIALLAKERVGSEIRKIL 213
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+T+ R D+ TDGRHA V +++ + DA RRD T+N++++
Sbjct: 89 VTSFRKDIKTDGRHATVAYSDKIEDDAERRDFTINAIYM 127
>gi|356552841|ref|XP_003544771.1| PREDICTED: nitrate reductase [NADH] 2-like [Glycine max]
Length = 873
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++++S+HES +H+ D K D D + + + I EL + S I P +
Sbjct: 273 RIVVSEHESDNHYHYKDNKMLPSHVDADLANEEGWWYKQEYKINELSINSVITTPSHEEI 332
Query: 304 LKLENHQM----EVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++ E++GYA+SG G+ + RV+VT D G TWHV + ++W W
Sbjct: 333 LSINSYTTQRPYELRGYAYSGAGRKVTRVEVTFDGGETWHVCTLDHTEKPNKYGKYWCWC 392
Query: 360 LWRATIPVDPKTKEVSIMDML 380
W + EV ++D+L
Sbjct: 393 FW---------SLEVEVIDLL 404
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+S+S+++ H S W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 502 FSISEVKKHC-TSDSTWIIVHGHVYDCTRFLKDHPGGVDSILINAGTDCTEEFDAIH--- 557
Query: 81 LQDEVFELLESYRIGNISQED 101
D+ LLE +RIG + D
Sbjct: 558 -SDKARRLLEDFRIGELMTTD 577
>gi|168053054|ref|XP_001778953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669625|gb|EDQ56208.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 374
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENH 309
+I+S +E +QQ DYK F P W+ V+++ A+ + P+ S IC P +K +
Sbjct: 198 IIISKYECQFFFQQKDYKMFPPWIRWNNVNWSSQRALMDFPIQSVICEPGDGVVVK--SG 255
Query: 310 QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVA-----------NFTGQDSQAPLTRHWGW 358
++ GYA +GGG+ I RVD++I+ G+ W A D P HW W
Sbjct: 256 DVDFYGYAVAGGGRGIERVDISINNGKKWLEAVRLPKLPIEAQRGYKDDLHRP---HWAW 312
Query: 359 TLWR 362
TLW+
Sbjct: 313 TLWQ 316
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 486 KAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
KAVDSS N QP S IWNLRGVL+N +H++R+
Sbjct: 331 KAVDSSGNVQPASVDEIWNLRGVLNNCWHKIRI 363
Score = 40.0 bits (92), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA +E + + ++GL+WG A+G GARL DVLK AG+ + +HV
Sbjct: 74 CAGNRRREMSDKRKIRGLSWGPGAIGTG---GARLSDVLKLAGVEYYSDFTTRKGKHVE 129
>gi|365859144|ref|ZP_09399022.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Acetobacteraceae bacterium AT-5844]
gi|363713043|gb|EHL96702.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Acetobacteraceae bacterium AT-5844]
Length = 402
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ D S G ++DYF G DL G FVGD +R+ EDYLR+LR+
Sbjct: 118 EDAARRDFTINALSMDAS----GALWDYFGGRGDLAAGHVRFVGDAATRMAEDYLRVLRF 173
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
FRF AR + +AI+ + GL +S ER+W EL ++L
Sbjct: 174 FRFHARYGRGEPDADAM--AAIRAAVPGLARLSVERVWMELKRLL 216
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+T+LR DV TDGRHA+V ++ DW+ DA RRD T+N++ +
Sbjct: 94 VTSLRRDVMTDGRHAQVAWSTDWREDAARRDFTINALSM 132
>gi|255762690|gb|ACU33027.1| sulfite oxidase [Hibiscus cannabinus]
Length = 393
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQ 314
E + Q DYK F PS DW ++++ + PV S IC + D + ++ ++ +
Sbjct: 230 EECQGSFMQKDYKMFPPSVDWXNINWSTRRPQMDFPVQSVIC-SLEDVQ-SIKPGKITIX 287
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH-----WGWTLWRATIPVDP 369
GYA SGGG+ I RVDV+ID G+TW A+ + + ++ H W W L+ T+ +
Sbjct: 288 GYAASGGGRGIERVDVSIDGGKTWLEASRSQKTGIPYISDHESSDKWAWVLFEITVDIPH 347
Query: 370 KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T+ V+ +D A N P+ ++ ++
Sbjct: 348 STEIVA----------KAVDSAANVQPENVQDIW 371
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 473 SADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ D+ H EI +KAVDS+ N QPE+ +IWNLRG+L+ ++ RV++ +
Sbjct: 342 TVDIPH-STEIVAKAVDSAANVQPENVQDIWNLRGILNTSWXRVQIRV 388
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA + + V+G+ W +A+GNA W GA+L DVL+ GI S + +HV
Sbjct: 98 CAGNRRTAMSKTRKVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTSRTQSGGKHVE 156
>gi|407768627|ref|ZP_11116005.1| tRNA nucleotidyltransferase/poly(A) polymerase [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407288311|gb|EKF13789.1| tRNA nucleotidyltransferase/poly(A) polymerase [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 436
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRF---FARICNNPNNHKEE 704
LDGT+YD F+G DL++G F+G RI+EDYLRILR+FRF F R +P +
Sbjct: 137 LDGTIYDPFDGETDLREGRVRFIGIAEDRIEEDYLRILRFFRFQAWFGRPPLDPIGAE-- 194
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A + GL +IS ERI E+ K+L + +M+ N+L
Sbjct: 195 ---ACRKGAQGLRDISPERIRDEMFKLLRSRSPAATIKEMIGFNVL 237
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 842 GSFSKEMMLK--MLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSANFFRN 894
G ++ +LK ++++++ L +ET L+ GL + +P T + A+ +
Sbjct: 39 GGIVRDALLKRDLIDVDIACDLKPEETVIALEKAGL-KVIPTGLKHGTVTAITDASAYE- 96
Query: 895 LARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRIDVTTDGRHAEV FT+ W DA RRD T N+++ +
Sbjct: 97 ---ITTLRIDVTTDGRHAEVAFTDSWLGDARRRDFTFNALYCDL 137
>gi|157803201|ref|YP_001491750.1| poly(A) polymerase [Rickettsia canadensis str. McKiel]
gi|157784464|gb|ABV72965.1| poly(A) polymerase [Rickettsia canadensis str. McKiel]
Length = 403
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 32/190 (16%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF+G +DL++ F+G+ ++RI+EDYLRILR+FRF + N ++ E L A K
Sbjct: 135 IYDYFDGFKDLQQEKVVFIGEALNRIKEDYLRILRFFRFSSYYANQLDH---EGLKACKV 191
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL--LLFS---------------K 754
GL +S ERI +E+NKI+ + +++ M + L+FS K
Sbjct: 192 LKYGLKTLSRERIKSEMNKIIVSKRAAQILEAMFEIGILELIFSIQNYKIKFFEQANDFK 251
Query: 755 LKATTMREYIVELMKYKEKSELIKDFHKWRLPTF-PMNGNIIRQFFARI-CN------NP 806
L+ T L+ Y +K +K F W+ + M I F CN
Sbjct: 252 LELATR----YALLLYNQKDLNLKVFLDWKFSKYEAMQILSITNFLNDTECNMKKIWLEK 307
Query: 807 NNHKEEVLSA 816
NN+KE +L+A
Sbjct: 308 NNYKEYLLAA 317
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA++ FT D+ DA RRD T+N++
Sbjct: 90 ITTLRKDIECNGRHAKLVFTNDFAEDAARRDFTINAL 126
>gi|34581025|ref|ZP_00142505.1| poly(A) polymerase [Rickettsia sibirica 246]
gi|28262410|gb|EAA25914.1| poly(A) polymerase [Rickettsia sibirica 246]
Length = 418
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 166 IYDYFEGFKDLQQEKVVFIGEALYRIKEDYLRILRFFRFSSYYANQLDDGNFKACKALK- 224
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
DGL +S ERI +E++KI+ + +++ M
Sbjct: 225 --DGLKTLSRERIKSEMDKIIVSKRAAQILKAMF 256
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 121 ITTLRKDIECNGRHAKVIFTNDFAEDAARRDFTINAL 157
>gi|407773801|ref|ZP_11121101.1| tRNA nucleotidyltransferase/poly(A) polymerase [Thalassospira
profundimaris WP0211]
gi|407283247|gb|EKF08788.1| tRNA nucleotidyltransferase/poly(A) polymerase [Thalassospira
profundimaris WP0211]
Length = 456
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 8/88 (9%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRF---FARICNNPNNHKEE 704
LDGT+YD F+G DL+ G F+G +RI ED+LRILR+FRF F R +P +
Sbjct: 149 LDGTIYDPFDGETDLRDGRVRFIGVAENRIAEDFLRILRFFRFQAWFGRPPIDPVGAE-- 206
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKIL 732
A + ++GLH+IS ERI E+ K+L
Sbjct: 207 ---ACRKAVNGLHDISVERIRDEMFKLL 231
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 12/104 (11%)
Query: 842 GSFSKEMMLK--MLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSANFFRN 894
G ++ +LK ++++++ L +ET A L+ G+ R +P T + A +
Sbjct: 51 GGVVRDALLKRDLVDVDIACDLAPEETQAALEKAGI-RVIPTGLKHGTVTAITDAGVYE- 108
Query: 895 LARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR+DV TDGRHAEV FT+ W DA RRD T N+++ +
Sbjct: 109 ---ITTLRVDVLTDGRHAEVAFTDSWLEDAKRRDFTFNAIYCDL 149
>gi|323451337|gb|EGB07214.1| hypothetical protein AURANDRAFT_64855 [Aureococcus anophagefferens]
Length = 604
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 249 KVILSDHESTSHWQQN-DYKGFSPS-----TDWDTVDFAKSPAIQELPVISAICLPVADA 302
+++LS + W++ +YK PS D VDFA P+I ELP A P A
Sbjct: 216 RIVLSADTAVGAWERGMNYKAM-PSHWRSKADLKGVDFAALPSIHELPTQCAFSAPAAGD 274
Query: 303 KLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWR 362
+ ++ E +G+A G+A+ RV+V+ D G TW A+ Q P R W WT W
Sbjct: 275 AVDSDDESFEARGWALGSAGRAVHRVEVSADGGATWTEASLDAGTDQ-PYGRAWAWTTWS 333
Query: 363 ATIPV----DPKTKEVSIMDMLMGKKP 385
+P+ +P T D+ G P
Sbjct: 334 CDLPIPAGPEPLTLLARAADLGGGAMP 360
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 86 FELLESYRIGNISQED---SKLAAKDI-ASDPYVMEPVRSPLLKATSLKPYNAEPPPSML 141
+LL R+G +S ED AAK + A DPY EP R P L P NAE PP++L
Sbjct: 1 MDLLAPMRVGTLSAEDYASETCAAKTVDADDPYGDEPERHPALIVHGATPMNAESPPALL 60
Query: 142 VENFLTPSLLSQV 154
+ +LTP+ L V
Sbjct: 61 GDTYLTPNDLWYV 73
>gi|350591372|ref|XP_003358549.2| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial isoform
1, partial [Sus scrofa]
Length = 202
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 36/41 (87%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR+DV TDGRHAEV+FT DW+ DA RRDLT+NSMFLG
Sbjct: 122 ITTLRVDVATDGRHAEVEFTTDWQKDAERRDLTINSMFLGF 162
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G KP D+DFAT ATP QMK +F +R N KGEKHGT+ AR+++ ENFE+
Sbjct: 65 AVRDLLSGVKPQDVDFATTATPVQMKELFQSVGIRMINNKGEKHGTITARLHE-ENFEIT 123
Query: 435 PVK 437
++
Sbjct: 124 TLR 126
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYF 688
DGT++DYFNG+EDLK FVG RIQEDYLRILRYF
Sbjct: 162 FDGTLFDYFNGYEDLKNKKVRFVGQAKQRIQEDYLRILRYF 202
>gi|418407236|ref|ZP_12980554.1| tRNA nucleotidyltransferase [Agrobacterium tumefaciens 5A]
gi|358006380|gb|EHJ98704.1| tRNA nucleotidyltransferase [Agrobacterium tumefaciens 5A]
Length = 418
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D +G D++ G F+GD RI EDYLRILR+FRFFA + + + L A
Sbjct: 133 GKIIDLIDGLPDIETGTVRFIGDAAMRISEDYLRILRFFRFFAHYGSGRPDA--DGLRAS 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L +S ER+W+EL K+L +L M +L
Sbjct: 191 ARAKDKLGTLSAERVWSELKKLLSARDPSRALLWMRQSGVL 231
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 17/118 (14%)
Query: 830 ERIWTELN------KILGGSFSKEMMLK-MLEINMFPHLGTDETFATLDFEGLFRSMPIP 882
+RI+ LN +I+GG+ +M + +++++M L D G+ +++P
Sbjct: 16 KRIFALLNADGGEVRIVGGAVRNALMEQPVVDVDMATTLTPDVVVERAKAAGI-KAVPTG 74
Query: 883 F-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
TL+ F +TTLR DV T+GRHA+V F DW+ DA RRDLT+N+++
Sbjct: 75 IEHGTVTLVIDGEGFE----VTTLRRDVETNGRHAQVAFGTDWQTDAERRDLTINALY 128
>gi|356571356|ref|XP_003553844.1| PREDICTED: sulfite oxidase-like [Glycine max]
Length = 393
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 17/155 (10%)
Query: 254 DHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEV 313
+ E + Q DYK F PS +WD +D++ + PV IC + D ++ ++++
Sbjct: 229 EEECQGFFMQKDYKMFPPSVNWDNIDWSTRRPQMDFPVQCVIC-SLEDVS-TIKPGKVKI 286
Query: 314 QGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH-----WGWTLWRATIPVD 368
GYA SGGG+ I RVDV++D G+TW A+ + ++ H W W L+ T +
Sbjct: 287 SGYAASGGGRGIERVDVSVDGGKTWMEASRIQKSGVPYISEHASSDKWAWVLFEVTADIL 346
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T+ ++ +D A N P++++ ++
Sbjct: 347 HSTEIIA----------KAVDSAANVQPEKVEDIW 371
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 447 GNATWTGARLVDVLKAAGISPDQSLD---------SADVQHVHVEIWSKAVDSSYNTQPE 497
G TW A + IS S D +AD+ H EI +KAVDS+ N QPE
Sbjct: 307 GGKTWMEASRIQKSGVPYISEHASSDKWAWVLFEVTADILH-STEIIAKAVDSAANVQPE 365
Query: 498 SFANIWNLRGVLSNAYHRVRVE 519
+IWNLRG+L+ ++HRV+V+
Sbjct: 366 KVEDIWNLRGILNTSWHRVKVQ 387
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA + K VKG+ W +A+GNA W GA+L DVL+ GI S+ +HV
Sbjct: 98 CAGNRRTAMSKTKTVKGVGWDVSAIGNAIWGGAKLSDVLELIGIPKLTSVTEFGGRHVE 156
>gi|85706914|ref|ZP_01038004.1| Poly A polymerase family protein [Roseovarius sp. 217]
gi|85668525|gb|EAQ23396.1| Poly A polymerase family protein [Roseovarius sp. 217]
Length = 381
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 50/85 (58%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D G EDL+ F+ + RI+EDYLRILR+FRF A + + L+A
Sbjct: 130 DGTVIDPLAGLEDLRARRVRFIENADQRIREDYLRILRFFRFHAWYGDPEGGLDADGLAA 189
Query: 709 IKNNLDGLHNISGERIWTELNKILG 733
NLDGL +S ER+ E+ K+LG
Sbjct: 190 CAANLDGLARLSRERVGAEMCKLLG 214
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV T GRHA V F+ D DA RRD T+N+++
Sbjct: 89 VTTFREDVETFGRHAVVAFSMDIHSDARRRDFTMNALY 126
>gi|153008942|ref|YP_001370157.1| polynucleotide adenylyltransferase [Ochrobactrum anthropi ATCC
49188]
gi|151560830|gb|ABS14328.1| Polynucleotide adenylyltransferase region [Ochrobactrum anthropi
ATCC 49188]
Length = 415
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G D++ F+GD RI+EDYLRILR+FRFFA + E L A
Sbjct: 132 DGGVIDDVGGLGDIESRTLRFIGDAEQRIREDYLRILRFFRFFA--WYGSGRPEAEGLRA 189
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ER+W+EL K+L +L M +L
Sbjct: 190 SARLKDGLTQLSAERVWSELKKLLSAPDPSRALLWMRQAGVL 231
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T+GRHA+V F DWK DA RRD T+N++++
Sbjct: 91 VTTLRQDIETNGRHAKVAFGTDWKADAERRDFTINALYV 129
>gi|167537598|ref|XP_001750467.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771007|gb|EDQ84681.1| predicted protein [Monosiga brevicollis MX1]
Length = 241
Score = 73.6 bits (179), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 676 RIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
RI+EDYLRI+RYFRF RI N N H+ LSAI+ N GL ISGER+W EL KIL
Sbjct: 136 RIKEDYLRIMRYFRFHGRIALN-NEHEAAQLSAIRANAAGLEQISGERVWMELAKIL 191
Score = 62.8 bits (151), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLRID TDGR A V +T+DW LDA RRDLT+N+MF+ +
Sbjct: 92 ITTLRIDEQTDGRRAMVVYTDDWHLDAQRRDLTINAMFMDL 132
Score = 48.9 bits (115), Expect = 0.012, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ D+L G P D+D AT ATP++ KA+ VR E G +HGTV A + D E FE+
Sbjct: 36 AVRDLLRGLSPKDLDLATTATPEESKAILLAAHVRVV-ETGLQHGTVTAVI-DGEPFEIT 93
Query: 435 PVK 437
++
Sbjct: 94 TLR 96
Score = 46.2 bits (108), Expect = 0.077, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKIL 840
+F RI N N H+ LSAI+ N GL ISGER+W EL KIL
Sbjct: 149 RFHGRIALN-NEHEAAQLSAIRANAAGLEQISGERVWMELAKIL 191
>gi|350534980|ref|NP_001234681.1| sulfite oxidase [Solanum lycopersicum]
gi|114186917|gb|ABI53846.1| sulfite oxidase [Solanum lycopersicum]
Length = 393
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 23/157 (14%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQ 314
E + Q DYK F P+ +WD ++++ + PV SAIC + D + +++ ++ ++
Sbjct: 230 EECKGFFMQKDYKMFPPTVNWDNINWSTRRPQMDFPVQSAIC-SLEDVSV-VKHGKINIK 287
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVAN--------FTGQDSQAPLTRHWGWTLWRATIP 366
GYA SGGG+ I RVDV+ID G+TW A + DS + W W + A
Sbjct: 288 GYALSGGGRGIERVDVSIDGGKTWEEATRYQRTGVPYIADDSS---SDRWAWVFFEAEAN 344
Query: 367 VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ P++ E+ +D + N P+ + +++
Sbjct: 345 I-PQSAEIVA---------KAVDISANVQPESIGSVW 371
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
EI +KAVD S N QPES ++WNLRG+L+ ++HRV V +
Sbjct: 350 EIVAKAVDISANVQPESIGSVWNLRGILNTSWHRVHVRV 388
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA + + VKG+ W AA+GNA W GA+L DVL+ GI S+ + +HV
Sbjct: 98 CAGNRRTAMSKSRTVKGVGWDIAALGNAVWGGAKLADVLELVGIPYLASITQSGGKHVE 156
>gi|110634525|ref|YP_674733.1| polynucleotide adenylyltransferase [Chelativorans sp. BNC1]
gi|110285509|gb|ABG63568.1| Polynucleotide adenylyltransferase region [Chelativorans sp. BNC1]
Length = 409
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G V D G DL+ F+G+P RI+EDYLRILR+FRFFA P+ + +
Sbjct: 133 GRVVDLVGGLADLQSRTLRFIGEPEKRIREDYLRILRFFRFFAWYGSGRPDAEGLKACAR 192
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K+ L GL S ERIW EL K+L +L M +L
Sbjct: 193 LKDRLSGL---SVERIWMELKKLLAAPDPSRALLWMRQTGVL 231
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV T GRHA V F DWK DA RRD T+N+++
Sbjct: 91 VTTLRADVETFGRHARVVFGRDWKADAERRDFTINALY 128
>gi|402702870|ref|ZP_10850849.1| poly(A) polymerase [Rickettsia helvetica C9P9]
Length = 385
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF G +DL++ F+G+ + RI+EDYLRILR+FRF + N ++ + A+K
Sbjct: 135 IYDYFEGFKDLQQEKVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGGFKACKALK- 193
Query: 712 NLDGLHNISGERIWTELNKIL 732
DGL +S ERI +E++KI+
Sbjct: 194 --DGLKTLSRERIKSEMDKII 212
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V FT D+ DA RRD T+N++
Sbjct: 90 ITTLRKDIECNGRHAKVVFTNDFAEDAARRDFTINAL 126
>gi|103487591|ref|YP_617152.1| polynucleotide adenylyltransferase [Sphingopyxis alaskensis RB2256]
gi|98977668|gb|ABF53819.1| Polynucleotide adenylyltransferase region [Sphingopyxis alaskensis
RB2256]
Length = 398
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN---NPNNHKEEVL 706
G + D+F G DL +G AF+GD SRI ED+LRILR++RF AR +P +H
Sbjct: 134 GAIDDWFGGLADLDRGRVAFIGDAASRIAEDHLRILRFYRFAARFGRGDLDPASH----- 188
Query: 707 SAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+A+ L ++S ERI EL KIL + ++ +M +L
Sbjct: 189 AAVVAARQSLKSLSRERIADELAKILALPDPRAIVAQMHADGIL 232
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSANF 891
K++GG+ ++ L + ++++ L E L+ G+ + +P T + S +
Sbjct: 30 KVVGGAVRDTLLGLDVTDVDLATPLVPGEVTRRLEAAGI-KVIPTGIAHGTVTAIASGDH 88
Query: 892 FRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV TDGR A V F +DW+ DA RRD T+N+++
Sbjct: 89 HE----ITTLRRDVATDGRRATVAFADDWREDAARRDFTINALY 128
>gi|255536913|ref|XP_002509523.1| sulfite reductase, putative [Ricinus communis]
gi|223549422|gb|EEF50910.1| sulfite reductase, putative [Ricinus communis]
Length = 393
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQ 314
E + Q DYK F PS +WD ++++ + PV AIC + ++ +++V
Sbjct: 230 EECQGFFMQKDYKMFPPSVNWDNINWSTRRPQMDFPVQCAIC--SLEDVTTVKPGKVKVS 287
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTR------HWGWTLWRATIPVD 368
GYA SGGG+ I RVDV++D G+TW A+ Q + P W W L+ T+ V
Sbjct: 288 GYAASGGGRGIERVDVSVDGGKTWMEAS-RHQKTGVPYISDDMYNDKWAWVLFEVTLDVP 346
Query: 369 PKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
TK V+ +D A N P+ ++ ++
Sbjct: 347 HSTKIVA----------KAVDSAANVQPESVEDIW 371
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 28/124 (22%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG----------------I 465
CA + ++ VKP K G+AA G G VDV G I
Sbjct: 268 CAICSLEDVTTVKPGKVKVSGYAASGGGR--GIERVDVSVDGGKTWMEASRHQKTGVPYI 325
Query: 466 SPDQSLD---------SADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRV 516
S D D + DV H +I +KAVDS+ N QPES +IWNLRG+L+ ++HRV
Sbjct: 326 SDDMYNDKWAWVLFEVTLDVPH-STKIVAKAVDSAANVQPESVEDIWNLRGILNTSWHRV 384
Query: 517 RVEI 520
+V +
Sbjct: 385 QVRV 388
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA +VK V+G+ W +A+GNA W GA+L DVL+ GIS S+ + +HV
Sbjct: 98 CAGNRRTAMSDVKKVRGVGWDVSAIGNAVWGGAKLADVLELVGISKLTSMTKSGGKHVE 156
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 114 YVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTP 148
Y +P R P LK S +P+NAEPP S+L +++TP
Sbjct: 10 YSQDPPRHPSLKINSKQPFNAEPPRSVLANSYITP 44
>gi|424910969|ref|ZP_18334346.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392847000|gb|EJA99522.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 418
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D G D++ G F+GD +RI EDYLRILR+FRFFA + + + L A
Sbjct: 133 GEIIDLIYGLPDIETGTVRFIGDAATRISEDYLRILRFFRFFAHYGSGRPDA--DGLRAS 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L +S ER+W+EL K+L +L M +L
Sbjct: 191 ARAKDRLATLSAERVWSELKKLLSARDPSRALLWMRQSGVL 231
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 17/118 (14%)
Query: 830 ERIWTELN------KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIP 882
+RI+ LN +I+GG+ +M L +++I+M L D A G+ +++P
Sbjct: 16 KRIFALLNADGGEVRIVGGAVRNALMGLPVVDIDMATTLTPDVVVARAKAAGI-KAVPTG 74
Query: 883 F-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
TL+ F +TTLR DV T+GRHA+V F DW+ DA RRDLT+N+++
Sbjct: 75 IEHGTVTLVIDGEGFE----VTTLRRDVETNGRHAQVAFGTDWQTDAERRDLTINALY 128
>gi|349699327|ref|ZP_08900956.1| poly(A) polymerase [Gluconacetobacter europaeus LMG 18494]
Length = 408
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ D + G V+DYFNG DL G FVGD RI ED LRILR+
Sbjct: 117 EDAARRDFTINAMSCDSA----GVVHDYFNGRADLAVGRIRFVGDARLRITEDALRILRF 172
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
FRF AR + + A + + + +S ER+W+EL +IL G + +M
Sbjct: 173 FRFQARYGGDAPEPEAIAAIAALSGM--IDRLSVERVWSELRRILVGPHVARTLAQM 227
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 19/128 (14%)
Query: 821 LDGLH----NISGE--RIWTEL--NKILGGSFSKEMMLKML-EINMFPHLGTDETFATLD 871
LDGL ++SG+ RIW+ L +++GG+ + + + +I++ L D A L
Sbjct: 7 LDGLRRDMPDVSGQLARIWSILPDARLVGGAVRDLLCGRGVSDIDLATPLAPDVVMARLK 66
Query: 872 FEGLFRSMPIPF-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANR 926
G+ R +P T + F ITTLR D TDGRHA V +T DW+ DA R
Sbjct: 67 QAGM-RVVPTGLSHGTVTAVLEGRPFE----ITTLRRDEETDGRHATVAWTRDWREDAAR 121
Query: 927 RDLTVNSM 934
RD T+N+M
Sbjct: 122 RDFTINAM 129
>gi|418297096|ref|ZP_12908938.1| tRNA nucleotidyltransferase [Agrobacterium tumefaciens CCNWGS0286]
gi|355538194|gb|EHH07441.1| tRNA nucleotidyltransferase [Agrobacterium tumefaciens CCNWGS0286]
Length = 418
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D +G D++ G F+GD RI EDYLRILR+FRFFA + + + L A
Sbjct: 133 GEIIDLIDGLPDIETGTVRFIGDAAMRISEDYLRILRFFRFFAHYGSGRPD--ADGLRAS 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L +S ER+W+EL K+L +L M +L
Sbjct: 191 ARAKDKLGTLSAERVWSELKKLLSAHDPSRALLWMRQSGVL 231
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 17/118 (14%)
Query: 830 ERIWTELN------KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIP 882
+RI+ LN +I+GG+ +M L ++++++ L D A G+ +++P
Sbjct: 16 KRIFALLNADGGEVRIVGGAVRNALMDLPVVDVDLATTLTPDVVVARAKAAGI-KAVPTG 74
Query: 883 F-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
TL+ F +TTLR DV T+GRHA+V F DW+ DA RRDLT+N+++
Sbjct: 75 IEHGTVTLVIDGEGFE----VTTLRRDVETNGRHAQVAFGTDWQTDAERRDLTINALY 128
>gi|335428833|ref|ZP_08555743.1| poly(A) polymerase family protein [Haloplasma contractile SSD-17B]
gi|335430783|ref|ZP_08557669.1| poly(A) polymerase family protein [Haloplasma contractile SSD-17B]
gi|334887323|gb|EGM25655.1| poly(A) polymerase family protein [Haloplasma contractile SSD-17B]
gi|334891774|gb|EGM30020.1| poly(A) polymerase family protein [Haloplasma contractile SSD-17B]
Length = 386
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGD-PVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
D T+ DY NG +DL V VGD P R +ED LRILR FRF +R+ + +E L
Sbjct: 122 DETIIDYVNGQKDLHNKVIRAVGDSPDERFKEDALRILRAFRFSSRLGFDI---EEATLK 178
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
+KN + L NIS ERI+ ELN +L G ++K+ + M+
Sbjct: 179 GMKNQVHLLKNISQERIFKELNGLLQGKYAKKSLRNMV 216
>gi|325293611|ref|YP_004279475.1| tRNA nucleotidyltransferase [Agrobacterium sp. H13-3]
gi|325061464|gb|ADY65155.1| tRNA nucleotidyltransferase [Agrobacterium sp. H13-3]
Length = 418
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D +G D++ G F+GD RI EDYLRILR+FRFFA + + + L A
Sbjct: 133 GEIIDLIDGLPDIETGTVRFIGDAAMRISEDYLRILRFFRFFAHYGSGRPDA--DGLRAS 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L +S ER+W+EL K+L +L M +L
Sbjct: 191 ARAKDRLGTLSAERVWSELKKLLSARDPSRALLWMRQSGVL 231
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 17/118 (14%)
Query: 830 ERIWTELN------KILGGSFSKEMMLK-MLEINMFPHLGTDETFATLDFEGLFRSMPIP 882
+RI+ LN +I+GG+ +M + +++++M L D G+ +++P
Sbjct: 16 KRIFALLNADGGEVRIVGGAVRNALMEQPVVDVDMATTLTPDVVVERAKAAGI-KAVPTG 74
Query: 883 F-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
TL+ F +TTLR DV T+GRHA+V F DW++DA RRDLT+N+++
Sbjct: 75 IEHGTVTLVIDGEGFE----VTTLRRDVETNGRHAQVAFGTDWQIDAERRDLTINALY 128
>gi|83950749|ref|ZP_00959482.1| Poly A polymerase family protein [Roseovarius nubinhibens ISM]
gi|83838648|gb|EAP77944.1| Poly A polymerase family protein [Roseovarius nubinhibens ISM]
Length = 378
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D +G D + G F+ D RI+EDYLRILR+FRF A + E L+A
Sbjct: 130 DGTVIDPVDGVADARAGRVRFIEDAGRRIEEDYLRILRFFRFNA--IYGRDGLDPEALAA 187
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKL 755
I +LDGL ++ ER+ E+ K+L M L + Q +L L
Sbjct: 188 IAEHLDGLERLARERVGAEMRKLLAAP-EPSMSLAAMAQCGVLMRVL 233
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R D DGRHA+V FT+D DA RRD T+N+++
Sbjct: 89 ITTFRRDEEADGRHAKVAFTDDLAEDARRRDFTMNALY 126
>gi|57239582|ref|YP_180718.1| Poly(A) polymerase [Ehrlichia ruminantium str. Welgevonden]
gi|58579571|ref|YP_197783.1| poly(A) polymerase [Ehrlichia ruminantium str. Welgevonden]
gi|57161661|emb|CAH58591.1| putative nucleic acid independent RNA polymerase [Ehrlichia
ruminantium str. Welgevonden]
gi|58418197|emb|CAI27401.1| Poly(A) polymerase [Ehrlichia ruminantium str. Welgevonden]
Length = 397
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G VYDYF+G +DLK F+GDP +RIQEDYLRILR FRF A IC+ + + ++ +
Sbjct: 129 GIVYDYFSGIQDLKNKQLNFIGDPETRIQEDYLRILRAFRFHAAICSQ-DKLSDIIIQSC 187
Query: 710 KNNLDGLHNISGERIWTELNKILG 733
+ +S ERI E K+L
Sbjct: 188 TKYASCISKLSRERIRDEFFKLLS 211
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
ITTLR D+ DGRHAEV+FT +W+ DA+RRD T N+++ K
Sbjct: 87 ITTLRSDIYCDGRHAEVKFTNNWQQDASRRDFTFNALYCDEK 128
>gi|359789641|ref|ZP_09292577.1| polynucleotide adenylyltransferase region [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359254438|gb|EHK57446.1| polynucleotide adenylyltransferase region [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 418
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D G D++ F+G+ RI+EDYLRILR+FRFFA E + A
Sbjct: 132 DGTVVDLVGGLADIETRRLRFIGNAEDRIREDYLRILRFFRFFA--WYGTGRPDAEGVKA 189
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ER+W+EL K+L +L M +L
Sbjct: 190 CVRLKDGLDQLSAERVWSELKKLLSAPDPSRALLWMRQAGVL 231
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGR A+V+F +WK DA RRD T+N+++
Sbjct: 91 VTTLRADVETDGRRAKVRFGRNWKEDAQRRDFTINALY 128
>gi|86358651|ref|YP_470543.1| poly(A) polymerase [Rhizobium etli CFN 42]
gi|86282753|gb|ABC91816.1| poly(A) polymerase protein [Rhizobium etli CFN 42]
Length = 377
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
DG V D G D++K F+GD +RI ED+LRILR+FRFFA P+ + +
Sbjct: 92 DGEVVDLVGGLADIEKRNIRFIGDASTRIAEDHLRILRFFRFFAYYGSGRPDAEGLKACA 151
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
A ++ + +S ER+W+EL K+LG + +L M
Sbjct: 152 AARSK---IKTLSAERVWSELRKLLGAADPGRALLWM 185
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F+ DWK DA RRDLT+N+++
Sbjct: 51 VTTLRTDIETDGRHAKVAFSTDWKADAERRDLTINALY 88
>gi|449528907|ref|XP_004171443.1| PREDICTED: sulfite oxidase-like, partial [Cucumis sativus]
Length = 197
Score = 72.8 bits (177), Expect = 8e-10, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENH 309
+ ++ ES + Q DYK F PS DW +D++ + PV AIC + D +++
Sbjct: 29 ISINAEESQGFFMQKDYKMFPPSVDWSNIDWSARRPQMDFPVQCAIC-SLEDVD-RIKPG 86
Query: 310 QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL-----TRHWGWTLWRAT 364
++ V GYA +GGG+ I RVD++ID G+ W A + A + + W W + T
Sbjct: 87 KVTVSGYAVAGGGRGIERVDISIDGGKNWIEATRYQKIGVAYVADSLSSYKWAWVFFEIT 146
Query: 365 IPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ + T+ V+ +D A N P++++ ++
Sbjct: 147 VDIQRNTEIVA----------KAVDSAANVQPEKVEEIW 175
Score = 55.1 bits (131), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 473 SADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ D+Q + EI +KAVDS+ N QPE IWN+RG+L+N++HRV+V +
Sbjct: 146 TVDIQR-NTEIVAKAVDSAANVQPEKVEEIWNVRGILNNSWHRVQVGV 192
>gi|260429133|ref|ZP_05783110.1| tRNA-nucleotidyltransferase 1 [Citreicella sp. SE45]
gi|260419756|gb|EEX13009.1| tRNA-nucleotidyltransferase 1 [Citreicella sp. SE45]
Length = 382
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 607 GTVTA-------KVLSYRNRREKEDR---------IGENQPFRKLTLSVQDKDRSFRLDG 650
GTVT +V +YR E + R + E+ R T++ D R+
Sbjct: 77 GTVTVVADGVGHEVTTYRADVETDGRRAVVRYADDVAEDAARRDFTMNALYADARGRM-- 134
Query: 651 TVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIK 710
D G DL+ F+GD RI+EDYLRILR+FRF A + E L+ I
Sbjct: 135 --LDPLGGLPDLEARRVRFIGDAGERIREDYLRILRFFRFIAWYGDPAEGVDAEALAGIA 192
Query: 711 NNLDGLHNISGERIWTELNKIL 732
NLDGL +S ER+ E+ ++L
Sbjct: 193 ANLDGLQKLSAERVGHEMVRLL 214
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V++ +D DA RRD T+N+++
Sbjct: 90 VTTYRADVETDGRRAVVRYADDVAEDAARRDFTMNALY 127
>gi|302383755|ref|YP_003819578.1| polynucleotide adenylyltransferase region [Brevundimonas
subvibrioides ATCC 15264]
gi|302194383|gb|ADL01955.1| Polynucleotide adenylyltransferase region [Brevundimonas
subvibrioides ATCC 15264]
Length = 402
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 644 RSFRLD-------GTVYD-YFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R FRL+ G ++D G ED G FVGDP RI+EDYLRILR+FRFFA
Sbjct: 123 RDFRLNALYADRTGAIFDPTGQGVEDALAGRVVFVGDPDRRIEEDYLRILRFFRFFAWYG 182
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ E L+A + DGL +S ER+ EL K+L + + M +L
Sbjct: 183 RAAPDA--EGLAACAAHADGLARLSAERVSKELLKLLAAPDPRAAVAAMRTAGVL 235
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 815 SAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLE-INMFPHLGTDETFATLDFE 873
SA +D L G + + +GG ++ + ++ I++ L ++ A L
Sbjct: 14 SATIAVMDALEAAGGP----DCARFVGGCIRNALVGRPVDDIDIATRLKPEDAMAALKAA 69
Query: 874 GLFRSMPIPFTLL---FSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLT 930
GL +P L +A R ITTLR DV TDGR A V FT+DW DA RRD
Sbjct: 70 GL---KVVPTGLAHGTVTAVSERRPYEITTLRRDVETDGRRAVVAFTDDWAEDAARRDFR 126
Query: 931 VNSMF 935
+N+++
Sbjct: 127 LNALY 131
>gi|357975161|ref|ZP_09139132.1| polynucleotide adenylyltransferase region [Sphingomonas sp. KC8]
Length = 386
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN-PNNHKEEVL 706
L+ V DYF G +DL G F+GDP++RI ED+LRILR+FRF AR P+
Sbjct: 114 LNREVIDYFGGLDDLAAGRIRFIGDPLTRIAEDHLRILRFFRFHARFGRGKPDAAGLAAC 173
Query: 707 SAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL--LFSKLKATTMREYI 764
+A N+L GL S ERI EL K+L +E + M Q + + +++ T + +
Sbjct: 174 AARANDLMGL---SRERIADELLKLLALPDPRETVALMHAQGIFAPVLPEIETTGI-ARL 229
Query: 765 VELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFARI-CNNPNNHKEEVL 814
L+ + + + D + P + + Q AR+ +N + E+L
Sbjct: 230 ARLIGREAIAGIAPDAARRLAALLPRDPVTVVQVAARLRLSNAIRGRLELL 280
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV+TDGR A V FT+DW+ DA RRD T+N++F
Sbjct: 73 VTTLRRDVSTDGRRATVAFTDDWREDAARRDFTINALF 110
>gi|259417404|ref|ZP_05741323.1| polynucleotide adenylyltransferase region [Silicibacter sp.
TrichCH4B]
gi|259346310|gb|EEW58124.1| polynucleotide adenylyltransferase region [Silicibacter sp.
TrichCH4B]
Length = 386
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVL 706
R +G V D G +DL+ F+GD RI+EDYLRILRYFRF + + E L
Sbjct: 128 RPNGEVVDPLGGLDDLRARRVRFIGDATQRIREDYLRILRYFRFHSWYGDAAEGFDPEAL 187
Query: 707 SAIKNNLDGLHNISGERIWTELNKILGGS 735
AI +GL ++S ER+ +E+ K+L +
Sbjct: 188 GAIAETQEGLDHLSRERVGSEMIKLLSAA 216
Score = 46.2 bits (108), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGR A V F D DA RRD T+N+++
Sbjct: 89 ITTFRKDVATDGRRAVVAFATDIAEDARRRDFTMNALY 126
>gi|170742595|ref|YP_001771250.1| polynucleotide adenylyltransferase [Methylobacterium sp. 4-46]
gi|168196869|gb|ACA18816.1| Polynucleotide adenylyltransferase region [Methylobacterium sp.
4-46]
Length = 418
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++D G DL G F+GDP RI+EDYLRILR+FRF AR P + +
Sbjct: 136 GHLHDPVGGLPDLAAGRVRFIGDPAQRIREDYLRILRFFRFHARYGRGPLDPAGLAAAIA 195
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ER+ E+ K++ + E++ M LL
Sbjct: 196 AR--DGLATLSRERVRVEMLKLVAAPGAPEVVAVMSATGLL 234
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGRHA V++ D+ DA RRD T+N++F
Sbjct: 94 VTTLREDVETDGRHAVVRYGRDFGRDAARRDFTINALF 131
>gi|407784827|ref|ZP_11131976.1| polynucleotide adenylyltransferase [Celeribacter baekdonensis B30]
gi|407204529|gb|EKE74510.1| polynucleotide adenylyltransferase [Celeribacter baekdonensis B30]
Length = 367
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
GT+ D G DL+ G F+ +P RI+EDYLRILR+FRF+A ++ + L+A
Sbjct: 115 GTIIDPLGGLPDLRAGRVRFIDNPDLRIKEDYLRILRFFRFYAWYGDHSAGLDPDGLAAC 174
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIV 765
+LDGL +S ER+ E+ K+L S + + + Q+ +L + L + + + +
Sbjct: 175 ATHLDGLTTLSRERVGAEIIKLLSAP-SPDQAIGAMDQSGVLNTLLPGASTKAFFL 229
Score = 43.5 bits (101), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGR A V F+ + DA RRD T+N+++
Sbjct: 73 ITTFRKDVETDGRRAVVAFSTHMEDDARRRDFTMNAIY 110
>gi|182679758|ref|YP_001833904.1| polynucleotide adenylyltransferase [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182635641|gb|ACB96415.1| Polynucleotide adenylyltransferase region [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 417
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
GT+YDY G DL G F+G RI+EDYLRILR FRF A E L A
Sbjct: 138 GTLYDYTGGLADLAAGRVRFIGAARQRIREDYLRILRLFRFSADFAG--GRLDAEGLDAA 195
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+GL +S ERI EL K++GG E+ ++ L
Sbjct: 196 IREREGLRRLSTERIRAELLKLMGGKRVAEVAYEIAEAGLF 236
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV TDGR A V+F D++ DA+RRD T+N++
Sbjct: 96 ITTLRKDVETDGRRAIVRFGRDFEEDAHRRDFTINAL 132
>gi|110677804|ref|YP_680811.1| poly(A) polymerase [Roseobacter denitrificans OCh 114]
gi|109453920|gb|ABG30125.1| polyA polymerase family protein, putative [Roseobacter
denitrificans OCh 114]
Length = 392
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 47/84 (55%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG + D NG +D F+ DP RI+EDYLRILR+FRF A + + L A
Sbjct: 138 DGRLVDPLNGVQDCLNRRVRFIEDPQKRIREDYLRILRFFRFHAWYADPAAGFDPDALDA 197
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
I N GL +S ERI TE+ K+L
Sbjct: 198 IAQNTAGLAQLSAERIGTEMMKLL 221
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R D +TDGRHA V F+ D + DA RRD T+N+++
Sbjct: 97 VTTFRRDTSTDGRHAVVSFSTDIREDARRRDFTMNALY 134
>gi|87199043|ref|YP_496300.1| polynucleotide adenylyltransferase [Novosphingobium aromaticivorans
DSM 12444]
gi|87134724|gb|ABD25466.1| Polynucleotide adenylyltransferase region [Novosphingobium
aromaticivorans DSM 12444]
Length = 400
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 82/187 (43%), Gaps = 7/187 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
V+DY G DL F+GD RI+EDYLRILRYFRF AR + P + + E SA+
Sbjct: 138 VFDYHGGLADLAARRVRFIGDARQRIREDYLRILRYFRFQARFGSIPADTEAE--SAVSE 195
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYI--VELMK 769
GL +S ER+ EL +LG M +M L + +++ T + + +E +
Sbjct: 196 LAAGLKGLSRERVGWELMNLLGLPDPAPTMRRM--AELGVLAQVLPETAADGLDALEALI 253
Query: 770 YKEKSELIKDFHKWRLPT-FPMNGNIIRQFFARICNNPNNHKEEVLSAIKKNLDGLHNIS 828
E+S RL P + ++ AR+ + K A DG
Sbjct: 254 GNEQSARADAVAIRRLAALLPADRHLAELVAARLRLSAAQRKRLATVAAPSGADGDARAL 313
Query: 829 GERIWTE 835
RI E
Sbjct: 314 AYRIGIE 320
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 840 LGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPFT-LLFSANFFRNLAR 897
+GG ++ L +I+M L DET A L G+ +S+P +A
Sbjct: 34 VGGVVRDTILGLPAKDIDMATTLPPDETAARLSTAGI-KSVPTGIAHGTVTAVLPGGPVE 92
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGRHA V F+ DW+ DA RRD T+N+++
Sbjct: 93 ITTLRRDVSTDGRHATVSFSTDWRDDAARRDFTINALY 130
>gi|83953100|ref|ZP_00961822.1| polyA polymerase family protein [Sulfitobacter sp. NAS-14.1]
gi|83842068|gb|EAP81236.1| polyA polymerase family protein [Sulfitobacter sp. NAS-14.1]
Length = 388
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 46/83 (55%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D G DL+ F+ D RI+EDYLR LRYFRF A + E L+AI
Sbjct: 133 GRVIDPLEGLVDLRARRVRFIEDAAQRIREDYLRTLRYFRFCAWYADPVEGFDPEALAAI 192
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
++DGL +S ERI EL K+L
Sbjct: 193 AAHIDGLERLSAERIGAELTKLL 215
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F++ DA RRD T+N+++
Sbjct: 91 VTTFRRDVETDGRRAVVAFSDSILDDALRRDFTMNALY 128
>gi|254439635|ref|ZP_05053129.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Octadecabacter antarcticus 307]
gi|198255081|gb|EDY79395.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Octadecabacter antarcticus 307]
Length = 384
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 53/103 (51%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D G DL F+ D RI+EDYLRILR+FRF+A + + L+A
Sbjct: 130 DGTVIDPVGGISDLHARHVRFINDADMRIREDYLRILRFFRFYAWFGDPEQGLDADGLAA 189
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL 751
NLDGL ++ ER+ TE+ K L M M +LL
Sbjct: 190 CAGNLDGLEGLAKERVQTEILKTLLAPNPAPAMASMAICGVLL 232
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGR A V F++ + DA RRD T+N+++
Sbjct: 89 ITTFRKDVETDGRRAVVAFSDGLEDDAVRRDFTMNALY 126
>gi|222149362|ref|YP_002550319.1| poly(A) polymerase [Agrobacterium vitis S4]
gi|221736346|gb|ACM37309.1| poly(A) polymerase [Agrobacterium vitis S4]
Length = 420
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D G DL+ G F+GD RI EDYLR+LR+FRFFA + L A
Sbjct: 133 GEVIDPVGGLADLETGTLRFIGDARLRIAEDYLRVLRFFRFFA--WYGRGRPDADGLRAC 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D LH +S ER+W+E K+L +L M +L
Sbjct: 191 AAARDELHRLSAERVWSETKKLLSAKDPGRALLWMRQSGVL 231
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Query: 838 KILGGSFSKEMMLKML-EINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSANF 891
+++GG+ ++ + + +I++ L E A + G+ +++P TL+
Sbjct: 30 RVVGGAVRNSLLGEPVGDIDLATTLVPSEVTARAEAAGI-KAVPTGIEHGTVTLVIGGKP 88
Query: 892 FRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
F +TTLR DV T+GRHAEV F DW++DA RRD T+N+++
Sbjct: 89 FE----VTTLRRDVETNGRHAEVAFGTDWQVDAERRDFTINALY 128
>gi|85707865|ref|ZP_01038931.1| tRNA nucleotidyltransferase [Erythrobacter sp. NAP1]
gi|85689399|gb|EAQ29402.1| tRNA nucleotidyltransferase [Erythrobacter sp. NAP1]
Length = 396
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
V DYF G +DL K F+GD RI ED+LRILRY+RF AR + E+ S +
Sbjct: 135 VSDYFGGLDDLAKRRVRFIGDARQRIAEDHLRILRYYRFQARFGAELDPEAEDACSELSA 194
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMR--EYIVELMK 769
L GL S ER+ EL K+L + +M + +L L T +R E + EL++
Sbjct: 195 TLKGL---SRERVADELLKLLSLPDPGATIERM-FDRAVLRVILPETALRHVEQLRELIE 250
Query: 770 YKEKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVLSAIKKNLDGLHNISG 829
+ + D + P + ++ AR+ + +++SA ++ H++S
Sbjct: 251 REAEQGFAPDPIRRLATLLPPSPDVAEGVAARL-RLSKAQRAQLVSASERL---GHDVSN 306
Query: 830 ERIWTELNKILGGSFSKEMMLKMLE 854
R+ L LG +F+ + +L + E
Sbjct: 307 PRV---LAYELGNAFAIDRLLLLGE 328
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGR A V F +W+ DA RRD T+N+++
Sbjct: 90 VTTLRRDVATDGRRATVAFATEWREDAARRDFTINALY 127
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMND 427
++ D L+G HD+D AT TPDQ+ + A+ +RT G +HGTV A + D
Sbjct: 34 AVRDTLLGVAVHDVDCATTHTPDQVIDLCADAGIRTV-PTGIEHGTVTAILKD 85
>gi|114707044|ref|ZP_01439943.1| probable poly(A) polymerase [Fulvimarina pelagi HTCC2506]
gi|114537594|gb|EAU40719.1| probable poly(A) polymerase [Fulvimarina pelagi HTCC2506]
Length = 415
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC-NNPNNHKEEVLS 707
DG + D G D++ V F+GD +RI+EDYLRILR++RFFA P+ +
Sbjct: 133 DGEIVDPVGGLADIEGRVLRFIGDAEARIKEDYLRILRFYRFFAWYGRGRPDAAGIRASA 192
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K GL ++S ERIW EL K+LG +L M +L
Sbjct: 193 KLKA---GLAHLSAERIWMELKKLLGAPDPSRALLWMRQAGVL 232
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D++TDGRHAEV+F DW+ DA RRD T+N+++
Sbjct: 92 VTTLREDLSTDGRHAEVKFGRDWEADAWRRDFTINALY 129
>gi|261202834|ref|XP_002628631.1| sulfite oxidase [Ajellomyces dermatitidis SLH14081]
gi|239590728|gb|EEQ73309.1| sulfite oxidase [Ajellomyces dermatitidis SLH14081]
gi|239612447|gb|EEQ89434.1| sulfite oxidase [Ajellomyces dermatitidis ER-3]
Length = 406
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 77/133 (57%), Gaps = 7/133 (5%)
Query: 250 VILSDHESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLKL 306
+ + HES + +QQ+DYK P +T W+ + + K PA+Q +PV S + +P D ++
Sbjct: 238 ISVGPHESPNFYQQHDYKILPPEATTWEIAESYWPKVPAMQCMPVNSVVAVPGDDETVRR 297
Query: 307 E-NHQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFT-GQDSQAPLTRHWGWTLWRA 363
+ ++EV+G+A G + + RV+V+ D G+TW A G +S W W LWRA
Sbjct: 298 PPSGKLEVKGFAVPHGAEGPVTRVEVSADGGKTWVDAELNHGAESFNKGGSKWAWVLWRA 357
Query: 364 TIPVDPKTKEVSI 376
+PV+ K ++++I
Sbjct: 358 EVPVE-KGRDLTI 369
>gi|195345559|ref|XP_002039336.1| GM22782 [Drosophila sechellia]
gi|194134562|gb|EDW56078.1| GM22782 [Drosophila sechellia]
Length = 110
Score = 72.0 bits (175), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 37/40 (92%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
VEIW+KAVDS+YN QPE F +IWNLRGVL+NAYH+V+V+I
Sbjct: 70 VEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVKVKI 109
Score = 68.2 bits (165), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 317 AWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSI 376
AWSGGG+ IVRVD+T D+G +WHVA + + P RH+GW+LW A +PV ++
Sbjct: 12 AWSGGGRKIVRVDLTNDEGVSWHVAEL--EQEEIPDGRHYGWSLWTARLPVSEAQRKAGD 69
Query: 377 MDMLMGKKPHDIDFATNATPDQMKAMF 403
+++ +D A N P++ + ++
Sbjct: 70 VEIWAKA----VDSAYNVQPEKFEHIW 92
>gi|254475356|ref|ZP_05088742.1| polyA polymerase family protein [Ruegeria sp. R11]
gi|214029599|gb|EEB70434.1| polyA polymerase family protein [Ruegeria sp. R11]
Length = 383
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 50/86 (58%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVL 706
R DG V D +G DL F+G +RI+EDYLR LRYFRF A N + L
Sbjct: 129 RPDGEVVDPLDGLPDLVARRVRFIGTAENRIREDYLRSLRYFRFHAWYGNPDLGFDPDAL 188
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
SAI NLDG+ ++S ER+ EL K+L
Sbjct: 189 SAIAGNLDGIPSLSRERVGQELVKLL 214
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGR A V F++ K DA RRD T+N+++
Sbjct: 90 ITTFRRDVATDGRRAVVAFSDCIKEDAARRDFTMNALY 127
>gi|86136787|ref|ZP_01055365.1| polyA polymerase family protein [Roseobacter sp. MED193]
gi|85826111|gb|EAQ46308.1| polyA polymerase family protein [Roseobacter sp. MED193]
Length = 389
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVL 706
R DG++ D G DL F+G +RI+EDYLR LRYFRF A + E L
Sbjct: 129 RPDGSIVDPLGGMADLAARRVRFIGTAENRIREDYLRTLRYFRFHAWYGDKDAGFDPEAL 188
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
+AI NL+GL +S ER+ +E+ K+L
Sbjct: 189 AAIAANLEGLSQLSLERVTSEVLKLL 214
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F++D DA RRD T+N+++
Sbjct: 90 VTTFRKDVATDGRRAVVAFSKDIAEDAARRDFTMNAIY 127
>gi|338707222|ref|YP_004661423.1| polynucleotide adenylyltransferase region [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294026|gb|AEI37133.1| Polynucleotide adenylyltransferase region [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 402
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
++DYF G DL+ G F+GDP +RI ED+LRILRYFRF AR + L+A
Sbjct: 136 IHDYFGGIADLEAGCVRFIGDPETRIAEDHLRILRYFRFQARFGRGIPDAAS--LAACIK 193
Query: 712 NLDGLHNISGERIWTELNKILG 733
+ L +S ERI +EL KIL
Sbjct: 194 RANDLMALSRERIASELIKILA 215
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
IT+LR DV+TDGRHA + +++ W+ DA RRD T+N+++
Sbjct: 91 ITSLRKDVSTDGRHATIAYSDSWQDDAMRRDFTINALY 128
>gi|326201312|ref|ZP_08191184.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Clostridium papyrosolvens DSM 2782]
gi|325988880|gb|EGD49704.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Clostridium papyrosolvens DSM 2782]
Length = 448
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 26/203 (12%)
Query: 596 KHGYQLRIAGEGTVTAKVLSYRNRREKED-RIGENQPFRKLTLSVQDKDRSFRLDGTVY- 653
KHG ++GE ++ +V +YR + +D R E F +L R F ++ Y
Sbjct: 70 KHGTVTVLSGE--MSLEVTTYRIDGDYKDFRRPEKVEFTS-SLKEDLARRDFTINAMAYH 126
Query: 654 ------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
D+F G +DLKK V VGDP R +ED LR+LR RF A++ + +E
Sbjct: 127 PEHGLVDFFGGLKDLKKRVIKAVGDPKQRFREDALRMLRAIRFSAQLGFSI---EEATFE 183
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVEL 767
AIKNN + NIS ER+ ELNK L + Q+ L F+ L T + YI+
Sbjct: 184 AIKNNSALIANISSERVRDELNKTL------------VSQHPLHFNYLHQTGILPYILPE 231
Query: 768 MKYKEKSELIKDFHKWRLPTFPM 790
+ K+E + +H + + M
Sbjct: 232 FERCYKTEQVNPYHVYNVADHTM 254
>gi|300024044|ref|YP_003756655.1| polynucleotide adenylyltransferase region [Hyphomicrobium
denitrificans ATCC 51888]
gi|299525865|gb|ADJ24334.1| Polynucleotide adenylyltransferase region [Hyphomicrobium
denitrificans ATCC 51888]
Length = 418
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG +YD G DL++ F+GD +RI+EDYLRILR+FRF A + + + +A
Sbjct: 138 DGAIYDPMGGIADLRRRRVRFIGDGEARIREDYLRILRFFRFSAEYGKG-HLDVDGLAAA 196
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVEL 767
IK GL ++ ERI E K+L ++ E++ + +Y++ +L L T E + L
Sbjct: 197 IKLK-QGLSKLAAERIRAEFLKLLAAPYAAEVV-RAMYESEILALVLPGTLHPERLARL 253
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA V FT+ W DA RRD T+N+++
Sbjct: 97 VTTLRRDIETDGRHATVAFTQSWDEDAQRRDFTINALY 134
>gi|115522969|ref|YP_779880.1| polynucleotide adenylyltransferase [Rhodopseudomonas palustris
BisA53]
gi|115516916|gb|ABJ04900.1| Polynucleotide adenylyltransferase region [Rhodopseudomonas
palustris BisA53]
Length = 418
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S DGTV+D+ G ED+ F+GDP RI EDYLRILR+FR A + +E
Sbjct: 131 SVSADGTVHDHVGGLEDIAARRVRFIGDPDRRIAEDYLRILRFFRIHAAYGQGAVD-REA 189
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKIL 732
L+ I+ DGL +S ERI E+ K++
Sbjct: 190 YLACIRGR-DGLATLSAERIRMEMLKLM 216
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV T GR A+V+F DW DA RRD T+N +
Sbjct: 94 ITTLREDVETFGRKAKVEFGRDWVRDAQRRDFTINGL 130
>gi|195357941|ref|XP_002045145.1| GM18721 [Drosophila sechellia]
gi|194133882|gb|EDW55398.1| GM18721 [Drosophila sechellia]
Length = 70
Score = 71.6 bits (174), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 37/40 (92%)
Query: 481 VEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
VEIW+KAVDS+YN QPE F +IWNLRGVL+NAYH+V+V+I
Sbjct: 30 VEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVKVKI 69
>gi|418054325|ref|ZP_12692381.1| tRNA adenylyltransferase [Hyphomicrobium denitrificans 1NES1]
gi|353211950|gb|EHB77350.1| tRNA adenylyltransferase [Hyphomicrobium denitrificans 1NES1]
Length = 418
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG +YD G +DL++ F+GD +RI+EDYLRILR+FRF A+ + L+A
Sbjct: 138 DGMIYDPIGGLDDLRRRRVRFIGDAEARIREDYLRILRFFRFSAQYGKGQLDAVG--LAA 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
GL ++ ERI E K+L F+ E++L M +L
Sbjct: 196 AIALKQGLTQLAAERIRAEFLKLLAAPFAAEVVLTMHESGIL 237
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA V FT+ W+ DA RRD T+N+++
Sbjct: 97 VTTLRRDIETDGRHATVAFTQSWEDDAKRRDFTINALY 134
>gi|356548676|ref|XP_003542726.1| PREDICTED: nitrate reductase [NADH] 2-like [Glycine max]
Length = 886
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++++++HE SH+ D + D + + + I EL + S I P +
Sbjct: 287 RIVVTEHECDSHYHYKDNRVLPSHVDAELANDEGWWYKPEYIINELNINSVITTPCHEEI 346
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGG+ + RV+VT+D G TWHV + ++W W
Sbjct: 347 LPINSWTTQRPYVIRGYAYSGGGRKVTRVEVTLDGGETWHVCTLDHTEKPNKYGKYWCWC 406
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 407 FW---------SLEVEVLDLLGAKE 422
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+S+S+++ H + S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 516 FSISEVKKHSNPDSA-WIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 571
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE YRIG +
Sbjct: 572 -SDKAKKLLEDYRIGEL 587
>gi|307944158|ref|ZP_07659499.1| tRNA-nucleotidyltransferase 1 [Roseibium sp. TrichSKD4]
gi|307772504|gb|EFO31724.1| tRNA-nucleotidyltransferase 1 [Roseibium sp. TrichSKD4]
Length = 416
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R TL+ DR+ GT++D G D G F+G+P RI+EDYLRILR+
Sbjct: 121 EDAKRRDFTLNAIYADRA----GTLFDPLGGVPDCLAGRVRFIGNPEGRIREDYLRILRF 176
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL----GGSFSKEMMLK 743
FR A E L+A +GL +S ERI E+ ++L G S EM K
Sbjct: 177 FRIHA--TYGKGKLDPEGLAACARLQEGLQTLSSERIGAEMKRLLPASGGSSVVPEMAQK 234
Query: 744 MLYQNLLL 751
+ +LL
Sbjct: 235 GILHQVLL 242
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 21/128 (16%)
Query: 822 DGLHNISGERIWTELNKI------LGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEG 874
D LH +R++ L K +GG+ ++ + ++++++ ++ A ++ G
Sbjct: 14 DWLHANGLQRLFDALEKAGAEARAVGGAVRNSLVSVPVVDVDIATTARPEDVIAAVNAAG 73
Query: 875 LFRSMPIP-------FTLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRR 927
L PIP T+L + +TTLR DV T GR A+V F DW DA RR
Sbjct: 74 L---KPIPTGVDHGTVTVLSEGEAYE----VTTLRRDVETFGRQAKVVFGSDWIEDAKRR 126
Query: 928 DLTVNSMF 935
D T+N+++
Sbjct: 127 DFTLNAIY 134
>gi|169615865|ref|XP_001801348.1| hypothetical protein SNOG_11098 [Phaeosphaeria nodorum SN15]
gi|160703066|gb|EAT81597.2| hypothetical protein SNOG_11098 [Phaeosphaeria nodorum SN15]
Length = 285
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 13/129 (10%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTD-------WDTVDFAKSPAIQELPVISAICLPVAD 301
K+ + ES S++QQ+DYK P D W + K PAIQ++PV S I +P +
Sbjct: 117 KITVQMKESESYYQQHDYKILPPEADTKEKAEEW----WGKVPAIQDMPVNSVIGMPSSG 172
Query: 302 AKLKL-ENHQMEVQGYAW-SGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
+ +K ++ +EV+GYA SG IV+V+V++D G TW A W W
Sbjct: 173 STVKRGDDGTIEVRGYALPSGADGPIVKVEVSVDGGHTWSDAELIRDYKGDHAELRWAWC 232
Query: 360 LWRATIPVD 368
LW+A + V+
Sbjct: 233 LWKANVKVE 241
>gi|58038811|ref|YP_190775.1| poly(A) polymerase [Gluconobacter oxydans 621H]
gi|58001225|gb|AAW60119.1| Poly(A) polymerase/t-RNA nucleotidyltransferase [Gluconobacter
oxydans 621H]
Length = 396
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 627 GENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILR 686
E+ R T++ DR RL +DYF G ED++ FVGD RI ED LR LR
Sbjct: 112 AEDAARRDFTINAMSLDRHDRL----HDYFGGREDIQNHRVRFVGDASRRIAEDALRALR 167
Query: 687 YFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
+FRF AR + + K A+ L + +S ER+ +EL +IL G E + M
Sbjct: 168 FFRFDARYGHGVPDRK--ACQAVSEQLGLIGTLSAERVASELLRILSGPRLNETIGAMAS 225
Query: 747 QNLL 750
LL
Sbjct: 226 VGLL 229
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR D TDGRHA V +T+DW DA RRD T+N+M L
Sbjct: 89 ITTLRRDEETDGRHAIVAWTQDWAEDAARRDFTINAMSL 127
>gi|227822872|ref|YP_002826844.1| polyA polymerase family protein [Sinorhizobium fredii NGR234]
gi|227341873|gb|ACP26091.1| polyA polymerase family protein [Sinorhizobium fredii NGR234]
Length = 419
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G ++DY G D++ F+G R+ EDYLRILRYFRFFA + + E L A
Sbjct: 132 NGEIFDYVGGLPDIESRTLRFIGSAAERVAEDYLRILRYFRFFAHYGSGRPDA--EGLRA 189
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
L +S ER+W E+ K+L +L M +L
Sbjct: 190 CAQARAKLATLSAERVWGEMKKLLAAEDPGRALLWMRQAGVL 231
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGR AEV F DWK DA RRD T+N+++
Sbjct: 91 VTTLRRDVATDGRRAEVAFGTDWKADAGRRDFTINALY 128
>gi|395765984|ref|ZP_10446574.1| hypothetical protein MCO_01450 [Bartonella sp. DB5-6]
gi|395410719|gb|EJF77271.1| hypothetical protein MCO_01450 [Bartonella sp. DB5-6]
Length = 417
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G +D+ F+G SRI+EDYLRILR+FRFFA P+ +
Sbjct: 136 GQLYDDVGGLDDIASRTVRFIGIAESRIREDYLRILRFFRFFAWYGTGRPDVQGLKACVC 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+KN GL +S ERIW E+ K+L S +L M +L
Sbjct: 196 LKN---GLQKLSSERIWGEIKKLLAASDPIRALLWMRQSGIL 234
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ TDGRHA+V F DW+ DA RRD T+N+++
Sbjct: 94 ITTLRSDIETDGRHAKVAFGRDWQKDAERRDFTINALY 131
>gi|389874396|ref|YP_006373752.1| polynucleotide adenylyltransferase [Tistrella mobilis KA081020-065]
gi|388531576|gb|AFK56770.1| polynucleotide adenylyltransferase region [Tistrella mobilis
KA081020-065]
Length = 449
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S L G +YD F+G DL G F+GD RI ED LRILR+FRF AR+ +
Sbjct: 144 SLDLAGRLYDPFDGLSDLAAGRVRFIGDARRRILEDILRILRFFRFQARLGRGEPDRA-- 201
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGG 734
+ A + + + +SGERI E +ILGG
Sbjct: 202 AVDACREFAERIQALSGERIREEFLRILGG 231
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 29/41 (70%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+TTLR DV TDGR A V F+ DW DA RRD TVN+M L +
Sbjct: 107 VTTLRRDVATDGRRAVVAFSRDWAEDARRRDFTVNAMSLDL 147
>gi|121601737|ref|YP_989284.1| tRNA-nucleotidyltransferase [Bartonella bacilliformis KC583]
gi|421761087|ref|ZP_16197892.1| tRNA-nucleotidyltransferase [Bartonella bacilliformis INS]
gi|120613914|gb|ABM44515.1| tRNA-nucleotidyltransferase [Bartonella bacilliformis KC583]
gi|411173497|gb|EKS43541.1| tRNA-nucleotidyltransferase [Bartonella bacilliformis INS]
Length = 417
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D+ F+G RI EDYLRILR+FRFFA P+ + A
Sbjct: 136 GQLYDLVGGLSDIASRTIRFIGVAEQRICEDYLRILRFFRFFAWYGAGRPDAQGLKACVA 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K+ GLH +S ER+W E+ K+L S +L M +L
Sbjct: 196 LKH---GLHKLSSERVWEEIKKLLAASDPTRALLWMRQSGIL 234
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGR+A+V F DWK DA RRD T+N+++
Sbjct: 94 VTTLRSDVETDGRYAKVAFGRDWKKDAERRDFTINALY 131
>gi|256089935|ref|XP_002580992.1| poly(A) polymerase [Schistosoma mansoni]
Length = 135
Score = 70.9 bits (172), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/39 (79%), Positives = 35/39 (89%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR+DV TDGRH+EV FT +WKLDA RRDLTVNSMFL
Sbjct: 5 VTTLRVDVVTDGRHSEVVFTNNWKLDAERRDLTVNSMFL 43
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC--NNPNNHKEE 704
R+ G + DYFNG +DLK FVGDP +RI+EDYLRILRYFRF R+ + + H E+
Sbjct: 73 RVLGHLLDYFNGRDDLKNHRIRFVGDPDARIKEDYLRILRYFRFHGRLSTEDTYDKHDED 132
Query: 705 VL 706
VL
Sbjct: 133 VL 134
>gi|116253238|ref|YP_769076.1| poly(A) polymerase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257886|emb|CAK08984.1| putative poly(A) polymerase [Rhizobium leguminosarum bv. viciae
3841]
Length = 417
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G V D G D+++ F+GD RI ED+LRILR+FRFFA P+ + SA
Sbjct: 133 GEVVDLVGGLADIERRNIRFIGDAAMRIAEDHLRILRFFRFFAYYGSGRPDAEGLKACSA 192
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
++ L ++S ER+W+EL K+LG + +L M
Sbjct: 193 ARSK---LTSLSAERVWSELRKLLGAADPGRALLWM 225
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 837 NKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSAN 890
+++GG+ +M L + +I++ L + + G+ +++P TL+
Sbjct: 29 GRVVGGAVRNSLMGLPVNDIDIATTLRPETVMERAEAAGI-KAVPTGLDHGTVTLVIDGK 87
Query: 891 FFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
F +TTLR DV TDGR A+V F+ DWK DA RRDLT+N+++
Sbjct: 88 PFE----VTTLRTDVETDGRRAKVAFSTDWKADAERRDLTINALY 128
>gi|83942051|ref|ZP_00954513.1| polyA polymerase family protein [Sulfitobacter sp. EE-36]
gi|83847871|gb|EAP85746.1| polyA polymerase family protein [Sulfitobacter sp. EE-36]
Length = 367
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 46/83 (55%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D G DL+ F+ D RI+EDYLR LRYFRF A + E L+AI
Sbjct: 112 GRVIDPLEGLVDLRARRVRFIEDAAQRIREDYLRTLRYFRFCAWYADPIEGFDPEALAAI 171
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
+ DGL ++S ERI EL K+L
Sbjct: 172 AAHTDGLESLSAERIGAELTKLL 194
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F++ DA RRD T+N+++
Sbjct: 70 VTTFRRDVETDGRRAVVAFSDSILDDALRRDFTMNALY 107
>gi|296116685|ref|ZP_06835295.1| putative tRNA nucleotidyltransferase [Gluconacetobacter hansenii
ATCC 23769]
gi|295976897|gb|EFG83665.1| putative tRNA nucleotidyltransferase [Gluconacetobacter hansenii
ATCC 23769]
Length = 434
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 109/282 (38%), Gaps = 44/282 (15%)
Query: 473 SADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEIWSKAVDSSYNTQ 532
SA VQ HV++ S + Y T+PE+ A + IW D+
Sbjct: 18 SAPVQPAHVQLASDPLARLYRTRPETVATL---------------ARIWDIVPDARLVGG 62
Query: 533 PENGHPSGYQPRATLQGARLLTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAG 592
G T+ + T P P V + G G + + H T
Sbjct: 63 AVRDLLCGR----TVSDMDMATALP-PQDVMARLGAAGIRVVPTGLAHGTVT-------A 110
Query: 593 IFEKHGYQLRIAGEGTVT----AKVLSYRNRREKEDRIGENQPFRKLTLSVQDKDRSFRL 648
+ E Y++ T A+V + RE R R T++ DR+
Sbjct: 111 VLEGRPYEITTLRRDEQTDGRHAQVAWTDDWREDAAR-------RDFTINAMSCDRA--- 160
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
G V+D F G DL G FVGD +RI ED LRILR+FRF AR + + +
Sbjct: 161 -GVVHDPFGGRADLAAGRVRFVGDAHARITEDALRILRFFRFNARYGGDVPDADAMAAAT 219
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ + +S ERIW+EL +IL G + M + +L
Sbjct: 220 ALAPM--VERLSVERIWSELRRILSGPRVAATLALMEHGGVL 259
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 831 RIWTEL--NKILGGSFSKEMMLKML-EINMFPHLGTDETFATLDFEGLFRSMPIPFTL-L 886
RIW + +++GG+ + + + +++M L + A L G+ R +P
Sbjct: 49 RIWDIVPDARLVGGAVRDLLCGRTVSDMDMATALPPQDVMARLGAAGI-RVVPTGLAHGT 107
Query: 887 FSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+A ITTLR D TDGRHA+V +T+DW+ DA RRD T+N+M
Sbjct: 108 VTAVLEGRPYEITTLRRDEQTDGRHAQVAWTDDWREDAARRDFTINAM 155
>gi|449441692|ref|XP_004138616.1| PREDICTED: sulfite oxidase-like [Cucumis sativus]
Length = 369
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENH 309
+ ++ ES + Q DYK F PS DW +D++ + PV AIC + D +++
Sbjct: 225 ISINAEESQGFFMQKDYKMFPPSVDWSNIDWSARRPQMDFPVQCAIC-SLEDVD-RIKPG 282
Query: 310 QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL-----TRHWGWTLWRAT 364
++ V GYA +GGG+ I RVD++ID G+ W A + A + + W W + T
Sbjct: 283 KVTVSGYAVAGGGRGIERVDISIDGGKNWIEATRYQKIGVAYVADSLSSYKWAWVFFEIT 342
Query: 365 IPVDPKTKEVSIMDMLMGKK 384
+ + T+ V+ + +K
Sbjct: 343 VDIQRNTEIVAKAQRMCNQK 362
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA +V+ VKG+ W + +GNA W GA+L DVL+ G+S +HV
Sbjct: 98 CAGNRRTAMSKVRKVKGVGWDISTLGNAVWGGAKLADVLELVGVSKFSYCTQKGGKHVE 156
Score = 40.0 bits (92), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 110 ASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTP 148
A Y EP+R P L + +P+NAEPP S L+ +++TP
Sbjct: 6 APSDYSQEPLRHPSLIINAKEPFNAEPPRSALISSYITP 44
>gi|218186792|gb|EEC69219.1| hypothetical protein OsI_38220 [Oryza sativa Indica Group]
Length = 400
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
+V + + E + Q DYK F PS DWD + ++ + PV SAIC + D +
Sbjct: 228 RVDIIEEECQGFFMQKDYKMFPPSVDWDNIVWSTRKPQMDYPVQSAIC-SLEDTNAIIPG 286
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL------TRHWGWTLWR 362
++ V GYA SGGG+ I RVD++ D G+TW A Q P + W W L++
Sbjct: 287 -EVTVTGYALSGGGRGIERVDISTDGGKTWFGA-VRYQKEGVPYVAGDISSDKWAWVLFK 344
Query: 363 ATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
I V T+ + +D + N P+ ++ ++
Sbjct: 345 TVIDVKGDTEVIV----------KAVDSSANVQPESVETIW 375
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
E+ KAVDSS N QPES IWNLRG+L+ +HRVR+
Sbjct: 354 EVIVKAVDSSANVQPESVETIWNLRGILNTCWHRVRL 390
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 386 HDID--FATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGH 443
HDID + T A + A ++ + CA E + + V+G+ W
Sbjct: 64 HDIDSYYVTVAGLIERPAKLYLNDIKKLPKYNVTATLQCAGNRRTEMSKSRKVRGVGWDV 123
Query: 444 AAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHV 479
A+GNATW GA+L DVL+ G+ + + +HV
Sbjct: 124 CALGNATWGGAKLSDVLQLIGVPYHTEITPSGGKHV 159
>gi|119499111|ref|XP_001266313.1| sulfite oxidase, putative [Neosartorya fischeri NRRL 181]
gi|119414477|gb|EAW24416.1| sulfite oxidase, putative [Neosartorya fischeri NRRL 181]
Length = 367
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLK 305
++ +SDHES + +QQ+DYK SP + D ++ +A++P + ++P+ S + +P + +
Sbjct: 202 RITVSDHESPNFYQQHDYKVLSPAAVDQESAQPFWAQTPPMTDMPINSVVAVPEDNETVA 261
Query: 306 LENHQ-MEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
L + MEV+GYA G + RV V++D G+TW A D R W W LW A
Sbjct: 262 LSSSGVMEVKGYAVPHGADGPVTRVQVSVDGGKTWIDAKI---DESGEGNRRWCWVLWSA 318
Query: 364 TI 365
+
Sbjct: 319 AV 320
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 433 VKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQ 469
+K V+G+ WG AAV N W G RL DVL AG+ D+
Sbjct: 93 LKEVQGIDWGDAAVMNCKWRGPRLRDVLLRAGVREDE 129
>gi|269958436|ref|YP_003328223.1| poly (A) polymerase [Anaplasma centrale str. Israel]
gi|269848265|gb|ACZ48909.1| poly (A) polymerase [Anaplasma centrale str. Israel]
Length = 425
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YDYF+G DL AF+G+ +RI ED+LRILR FRF A ICN + EE++S
Sbjct: 133 GKIYDYFSGIRDLGNRTVAFIGNAEARINEDFLRILRVFRFHASICNT-SPLSEEIISLC 191
Query: 710 KNNLDGLHNISGERIWTELNKILGGS 735
+ +S ER+ +E K+L +
Sbjct: 192 GKYAWSIAKLSKERVRSEFFKLLACT 217
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV DGRHA V FT W DA+RRD T N+++
Sbjct: 91 ITTLRRDVECDGRHAAVAFTNSWMEDASRRDFTFNALY 128
>gi|190892793|ref|YP_001979335.1| poly(A) polymerase [Rhizobium etli CIAT 652]
gi|190698072|gb|ACE92157.1| poly(A) polymerase protein [Rhizobium etli CIAT 652]
Length = 377
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G V D G D++ F+GD +RI ED+LRILR+FRFFA P+ + +A
Sbjct: 93 GEVVDLVGGLADIEARNIRFIGDAATRIAEDHLRILRFFRFFAYYGSGRPDAEGLKACAA 152
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
++ L +S ER+W+EL K+LG + +L M
Sbjct: 153 ARSK---LKTLSAERVWSELRKLLGAADPGRALLWM 185
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGRHA+V F+ DWK DA RRDLT+N+++
Sbjct: 51 VTTLRTDVETDGRHAKVAFSTDWKADAERRDLTINALY 88
>gi|452750899|ref|ZP_21950646.1| tRNA nucleotidyltransferase [alpha proteobacterium JLT2015]
gi|451962093|gb|EMD84502.1| tRNA nucleotidyltransferase [alpha proteobacterium JLT2015]
Length = 395
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
+G V DYF G DL+ G F+GDP++RI ED+LRILR+FRF R P++ +
Sbjct: 130 EGEVEDYFGGLADLEAGRVRFIGDPLARIAEDHLRILRFFRFHQRFGAGAPDDAAMAACT 189
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMM 741
A N+L L S ERI EL K+L +M
Sbjct: 190 ARANDLMAL---SRERIAMELMKMLAAEDPAGIM 220
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 837 NKILGGSFSKEMMLKML-EINMFPHLGTDETFATLDFEGLFRSMPIPF---TLLFSANFF 892
+++GG+ + + + ++++ +E A L G+ +++P T+ A+
Sbjct: 26 TRLVGGAVRDALAGRPVSDVDLATEFEPEEVIARLQAAGI-KAVPTGLAHGTVTAVADSL 84
Query: 893 RNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+A +TTLR DV T+GRHA+V +T DW+ DA RRD T+N+M
Sbjct: 85 --VAEVTTLRRDVETNGRHADVAYTSDWREDAARRDFTINAM 124
>gi|254487550|ref|ZP_05100755.1| tRNA nucleotidyltransferase [Roseobacter sp. GAI101]
gi|214044419|gb|EEB85057.1| tRNA nucleotidyltransferase [Roseobacter sp. GAI101]
Length = 394
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G V D G DL+ F+ D +RI+EDYLR LRYFRF A + + LSA
Sbjct: 138 EGRVIDPLEGLPDLRARRVRFIEDAEARIREDYLRTLRYFRFHAWYADPAKGFDPDALSA 197
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
I +N GL +S ERI E+ K+L
Sbjct: 198 IASNTAGLETLSAERIGAEMQKLL 221
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F+ + DA RRD T+N+++
Sbjct: 97 VTTFRRDVQTDGRRAVVAFSNNIDDDARRRDFTINALY 134
>gi|440227396|ref|YP_007334487.1| polynucleotide adenylyltransferase [Rhizobium tropici CIAT 899]
gi|440038907|gb|AGB71941.1| polynucleotide adenylyltransferase [Rhizobium tropici CIAT 899]
Length = 418
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
DG V D G DL++ F+GD +RI ED+LRILR+FRFFA P+ +
Sbjct: 132 DGVVVDLVGGLADLERRNIRFIGDAATRIAEDHLRILRFFRFFAYYGTGRPDAEGLRACA 191
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A K+ + +S ER+W+E+ K+L +L M +L
Sbjct: 192 AAKSK---ISTLSAERVWSEMKKLLAAPDPGRALLWMRQIGIL 231
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 837 NKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSAN 890
+++GG+ +M L + +I++ L + + G+ +++P TL+
Sbjct: 29 GRVVGGAVRNSLMGLPVADIDIATTLLPETVVERAEAAGI-KAVPTGIAHGTVTLVIDGK 87
Query: 891 FFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
F ITTLR DV TDGR A V F+ DW+ DA RRDLT+N+++
Sbjct: 88 PFE----ITTLRRDVETDGRRAVVAFSRDWQADAERRDLTINALY 128
>gi|730142|sp|P39866.1|NIA2_PHAVU RecName: Full=Nitrate reductase [NADH] 2; Short=NR-2
gi|392992|gb|AAA95940.1| nitrate reductase [Phaseolus vulgaris]
Length = 890
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++++++ E SH+ D + D + + F I EL + S I P D
Sbjct: 287 RIVVTEQECESHYHYKDNRVLPSHVDPELANEEGWWFKPEYIINELNINSVITTPCHDEI 346
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + V+GYA+SGGG+ + RV+VT+D G TWHV + ++W W
Sbjct: 347 LPINSWTTQRPYVVRGYAYSGGGRKVTRVEVTLDGGETWHVCTLDHPEKPNKYGKYWCWC 406
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 407 FW---------SLEVEVLDLLGTKE 422
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+S+S+++ H S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 516 FSVSEVKKHSSPDSA-WIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 571
Query: 81 LQDEVFELLESYRIGNI 97
D+ ++LE YRIG +
Sbjct: 572 -SDKAKKMLEDYRIGEL 587
>gi|349685567|ref|ZP_08896709.1| poly(A) polymerase [Gluconacetobacter oboediens 174Bp2]
Length = 408
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ D + G V+DYF G DL G FVG+ RI ED LRILR+
Sbjct: 117 EDAARRDFTINAMSCDSA----GVVHDYFGGQADLAAGRIRFVGNARQRIVEDALRILRF 172
Query: 688 FRFFARICN-NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
FRF AR P+ ++A+ +D +S ER+W+EL +IL G +++M
Sbjct: 173 FRFQARYGGAAPDPDAIAAITALSGMID---RLSVERVWSELRRILVGPHVTRTLVQMHD 229
Query: 747 QNLL 750
+L
Sbjct: 230 SGVL 233
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 19/128 (14%)
Query: 821 LDGLH----NISGE--RIWTEL--NKILGGSFSKEMMLKML-EINMFPHLGTDETFATLD 871
LDGL +ISG RIW L +++GG+ + + + +I++ DE A L
Sbjct: 7 LDGLRRDMPDISGHLARIWGILPDARLVGGAVRDLLCGRGVSDIDLATPHAPDEVMARLK 66
Query: 872 FEGLFRSMPIPF-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANR 926
G+ R +P T + + F ITTLR D TDGRHA V +T DW+ DA R
Sbjct: 67 QAGI-RVVPTGLSHGTVTAVLDGHPFE----ITTLRRDEETDGRHATVAWTHDWREDAAR 121
Query: 927 RDLTVNSM 934
RD T+N+M
Sbjct: 122 RDFTINAM 129
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 347 DSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMFAEE 406
D L R WG I D + ++ D+L G+ DID AT PD++ A +
Sbjct: 16 DISGHLARIWG-------ILPDARLVGGAVRDLLCGRGVSDIDLATPHAPDEVMARLKQA 68
Query: 407 KVRTFNEKGEKHGTVCARMNDKENFEVKPVK 437
+R G HGTV A + D FE+ ++
Sbjct: 69 GIRVV-PTGLSHGTVTAVL-DGHPFEITTLR 97
>gi|424882669|ref|ZP_18306301.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392519032|gb|EIW43764.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 417
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D G +D+K F+GD RI ED+LRILR+FRFFA + + E L A
Sbjct: 133 GEVVDLVGGLDDIKTRNIRFIGDAARRIAEDHLRILRFFRFFANYGSGRPDA--EGLKAC 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
L +S ER+W+EL K+LG + +L M
Sbjct: 191 SLARSKLTTLSAERVWSELRKLLGAADPGRALLWM 225
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
+TTLR DV TDGRHA+V F+ DWK DA RRDLT+N+++ K
Sbjct: 91 VTTLRTDVETDGRHAKVAFSTDWKADAERRDLTINALYADAK 132
>gi|145351467|ref|XP_001420098.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580331|gb|ABO98391.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 866
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDW---DTVDFAKSPA--IQELPVISAICLPVADAKL 304
+ +++H S + + D + P D D ++ + P EL + SAI P D +
Sbjct: 252 IRVTEHPSDNFYHFRDNRIMPPGVDAAMADKQNWWEKPEYIFNELNINSAIASPAHDECV 311
Query: 305 KLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLW 361
L+ + EV+GYA++GGG+AI RV+V++D G TW +AN + +HW W W
Sbjct: 312 PLDRERYEVKGYAYTGGGRAITRVEVSLDGGYTWRLANIRRPFAPTMYGKHWCWIFW 368
>gi|146278676|ref|YP_001168835.1| polynucleotide adenylyltransferase region [Rhodobacter sphaeroides
ATCC 17025]
gi|145556917|gb|ABP71530.1| Polynucleotide adenylyltransferase region [Rhodobacter sphaeroides
ATCC 17025]
Length = 380
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D G DL FVGDP+ RI+EDYLRILR+FRF A + E L+A
Sbjct: 131 GEVIDPLGGLPDLIARRVRFVGDPIQRIEEDYLRILRFFRFHAIYGDPSEGLDAEGLAAC 190
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
+GL +S ER+ E+ K+L
Sbjct: 191 AARAEGLGQLSRERLGAEMRKLL 213
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R D+ T GRHA V F+ D DA RRD T+N+++
Sbjct: 89 VTTFRRDIETFGRHAVVAFSTDVAEDAARRDFTMNALY 126
>gi|115488430|ref|NP_001066702.1| Os12g0442800 [Oryza sativa Japonica Group]
gi|77554934|gb|ABA97730.1| Sulfite oxidase, putative, expressed [Oryza sativa Japonica Group]
gi|113649209|dbj|BAF29721.1| Os12g0442800 [Oryza sativa Japonica Group]
Length = 400
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++ + + E + Q DYK F PS DWD + ++ + PV SAIC + D +
Sbjct: 228 RIDIIEEECQGFFMQKDYKMFPPSVDWDNIVWSTRKPQMDYPVQSAIC-SLEDTNAIIPG 286
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL------TRHWGWTLWR 362
++ V GYA SGGG+ I RVD++ D G+TW A Q P + W W L++
Sbjct: 287 -EVTVTGYALSGGGRGIERVDISTDGGKTWFGA-VRYQKEGVPYVAGDISSDKWAWVLFK 344
Query: 363 ATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
I V T+ + +D + N P+ ++ ++
Sbjct: 345 TVIDVKGDTEVIV----------KAVDSSANVQPESVETIW 375
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
E+ KAVDSS N QPES IWNLRG+L+ +HRVR+
Sbjct: 354 EVIVKAVDSSANVQPESVETIWNLRGILNTCWHRVRL 390
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 386 HDID--FATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGH 443
HDID + T A + A ++ + CA E + + V+G+ W
Sbjct: 64 HDIDSYYVTVAGLIERPAKLYLNDIKKLPKYNVTATLQCAGNRRTEMSKSRKVRGVGWDV 123
Query: 444 AAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHV 479
A+GNATW GA+L DVL+ G+ + + +HV
Sbjct: 124 CALGNATWGGAKLSDVLQLIGVPYHTEITPSGGKHV 159
>gi|392378565|ref|YP_004985725.1| putative tRNA nucleotidyltransferase/poly(A) polymerase
[Azospirillum brasilense Sp245]
gi|356880047|emb|CCD00992.1| putative tRNA nucleotidyltransferase/poly(A) polymerase
[Azospirillum brasilense Sp245]
Length = 427
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R LT++ S LDG VYD F G D+ G FVGDP RI+ED LR+LR+
Sbjct: 118 EDAARRDLTMNAL----SCTLDGCVYDPFGGLADMAAGRVRFVGDPRQRIEEDVLRLLRF 173
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG---SFSKEMMLKM 744
FRF A + E L+A L +SGER+ EL+++L + + +M+++
Sbjct: 174 FRFHAHYGRGAPD--EAALAACAEMAPRLPTLSGERVRGELSRLLAAPDPASAWALMIRL 231
Query: 745 LYQNLLLFSKLKATTMREYIVELMKYKEKSELIKDF 780
LL ++ + + E E ++ F
Sbjct: 232 GVMVHLLPDAVRTARLDGLVRLEHDLDEPPEAVRRF 267
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV T GRHA V+FT+DW+ DA RRDLT+N++
Sbjct: 94 ITTLRRDVETFGRHARVEFTDDWREDAARRDLTMNAL 130
>gi|239636869|ref|ZP_04677868.1| cca-adding enzyme [Staphylococcus warneri L37603]
gi|239597543|gb|EEQ80041.1| cca-adding enzyme [Staphylococcus warneri L37603]
Length = 400
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 620 REKEDRIGENQP-----FRKLTLSVQDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAF 669
R +E+ I +P R L VQ +D + D +DYFNG +D+K G+
Sbjct: 85 RAEEEYIDHRRPSDVHFVRDLYEDVQRRDFTINAIAMDTDYQTFDYFNGEDDIKNGIIRT 144
Query: 670 VGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELN 729
VG P R +ED LRILR RF +++ NH A+ N ++ + +S ERI EL
Sbjct: 145 VGQPTERFEEDALRILRGLRFQSQLNFKIENH---TFKAMANQIEDIKYLSIERIIVELK 201
Query: 730 KILGG 734
K++ G
Sbjct: 202 KLISG 206
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
S+ D LM + HDID T+ATPD+++++F G++HGT+ N EN+EV
Sbjct: 29 SVRDYLMQRPIHDIDITTSATPDEIESIFDHTI-----PIGKEHGTINVVYN-HENYEVT 82
Query: 435 PVKG 438
+
Sbjct: 83 TFRA 86
>gi|391867866|gb|EIT77104.1| sulfite oxidase, molybdopterin-binding component [Aspergillus
oryzae 3.042]
Length = 383
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFA-------KSPAIQELPVISAICLPVAD 301
++ + DHES++ +QQ DYK P D VD A ++PA+ ++P+ S + +P
Sbjct: 219 RITVQDHESSNFYQQRDYKVLPP----DAVDSASAEPYWDRTPAMCDMPINSVVAVPGDG 274
Query: 302 AKLKL-ENHQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
+ L E+ +EV+GYA G + V V+ D G+TW A G + L R W W
Sbjct: 275 ETVHLSESSTLEVKGYAVPHGADGPVTGVQVSADGGQTWVDAEIEG----SSLERKWCWV 330
Query: 360 LWRATIPVDPKT 371
LWRA + V+ T
Sbjct: 331 LWRAKVRVEKGT 342
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 433 VKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLD 472
+K V+G+ WG AA+ N W G RL DVL AG++ SLD
Sbjct: 109 LKEVQGIDWGDAAIMNCKWKGPRLRDVLLRAGVT--SSLD 146
>gi|317148082|ref|XP_001822486.2| sulfite oxidase [Aspergillus oryzae RIB40]
Length = 370
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFA-------KSPAIQELPVISAICLPVAD 301
++ + DHES++ +QQ DYK P D VD A ++PA+ ++P+ S + +P
Sbjct: 206 RITVQDHESSNFYQQRDYKVLPP----DAVDSASAEPYWDRTPAMCDMPINSVVAVPGDG 261
Query: 302 AKLKL-ENHQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
+ L E+ +EV+GYA G + V V+ D G+TW A G + L R W W
Sbjct: 262 ETVHLSESSTLEVKGYAVPHGADGPVTGVQVSADGGQTWVDAEIEG----SSLERKWCWV 317
Query: 360 LWRATIPVDPKT 371
LWRA + V+ T
Sbjct: 318 LWRAKVRVEKGT 329
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 433 VKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLD 472
+K V+G+ WG AA+ N W G RL DVL AG++ SLD
Sbjct: 96 LKEVQGIDWGDAAIMNCKWKGPRLRDVLLRAGVT--SSLD 133
>gi|316932733|ref|YP_004107715.1| polynucleotide adenylyltransferase [Rhodopseudomonas palustris
DX-1]
gi|315600447|gb|ADU42982.1| Polynucleotide adenylyltransferase region [Rhodopseudomonas
palustris DX-1]
Length = 418
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKE 703
S DGTV+DY G D+ F+GDP RI EDYLRILR+FR A +P+ ++
Sbjct: 131 SMSADGTVHDYVGGLADIAARRVRFIGDPDQRIAEDYLRILRFFRIHAAYGAGSPD--RD 188
Query: 704 EVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
L+ I+ DGL +S ER+ E+ K++ ++ ++ M
Sbjct: 189 AYLACIRGR-DGLSTLSAERLRMEMLKLMVAGGAEASVVAM 228
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Query: 824 LHNISGERIWTELN------KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLF 876
LH R+ LN +++GG+ + L + ++++ DE G+
Sbjct: 13 LHTGPAARVLALLNGDGEEARVVGGAVRNALFGLPIGDVDIATTALPDEVVRRAKAAGI- 71
Query: 877 RSMPIPF-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTV 931
+++P TL+ + F ITTLR DV T GR A+V F DW DA RRD T+
Sbjct: 72 KAVPTGIEHGTVTLVLEGHGFE----ITTLREDVETFGRKAKVAFGRDWARDAQRRDFTI 127
Query: 932 NSM 934
N++
Sbjct: 128 NAL 130
>gi|420241913|ref|ZP_14746006.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium sp.
CF080]
gi|398069126|gb|EJL60500.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium sp.
CF080]
Length = 420
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D NG D++ F+G+ RI EDYLRILR+FRFFA + + + L A
Sbjct: 133 GEVIDLVNGLPDIQTRTVRFIGEAAERIAEDYLRILRFFRFFAHYGSGRPDA--DGLRAC 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L +S ER+W+E K+L + +L M +L
Sbjct: 191 ARAKDKLSTLSAERVWSETKKLLSATDPSRALLWMRQAGVL 231
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 17/118 (14%)
Query: 830 ERIWTELN------KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIP 882
+RI T LN ++ GG+ +M L + ++++ L ++ G+ R++P
Sbjct: 16 QRILTLLNADGGEARVAGGAVRNALMGLSVADVDVATTLRPEKVVERAVTAGI-RAVPTG 74
Query: 883 F-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
TL+ + F +TTLR D+ TDGR A+V F DW+ DA RRDLT+N+++
Sbjct: 75 IEHGTVTLVIDGHGFE----VTTLRRDIETDGRRAKVAFGTDWQADAERRDLTINALY 128
>gi|421591107|ref|ZP_16036016.1| poly(A) polymerase [Rhizobium sp. Pop5]
gi|403703500|gb|EJZ19714.1| poly(A) polymerase [Rhizobium sp. Pop5]
Length = 418
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D G D++ F+GD +RI ED+LRILR+FRFFA E L A
Sbjct: 133 GEVVDLVGGLADIETRNIRFIGDAATRIAEDHLRILRFFRFFA--FYGSGRPDAEGLKAC 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
+ L +S ER+W+EL K+LG + +L M
Sbjct: 191 SHARSKLKTLSAERVWSELRKLLGAADPGRALLWM 225
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGR A+V F+ DWK DA RRDLT+N+++
Sbjct: 91 VTTLRTDVETDGRRAKVAFSTDWKADAERRDLTINALY 128
>gi|218673043|ref|ZP_03522712.1| poly(A) polymerase protein [Rhizobium etli GR56]
Length = 365
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
+G V D G D++ F+GD +RI ED+LRILR+FRFFA P+ + +
Sbjct: 80 EGEVVDLVGGLADIETRNIRFIGDAATRIAEDHLRILRFFRFFAYYGSGRPDAEGLKACA 139
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
A ++ L +S ER+W+EL K+LG +L M
Sbjct: 140 AARSK---LKTLSAERVWSELRKLLGADDPGRALLWM 173
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGR A+V F+ DWK DA RRDLT+N+++
Sbjct: 39 VTTLRTDVETDGRRAKVAFSTDWKADAERRDLTINALY 76
>gi|449443347|ref|XP_004139441.1| PREDICTED: sulfite oxidase-like [Cucumis sativus]
gi|449523287|ref|XP_004168655.1| PREDICTED: sulfite oxidase-like [Cucumis sativus]
Length = 393
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQ 314
E + Q DYK F PS +WD +D++ + PV IC + D ++ ++ V
Sbjct: 230 EECQGFFMQKDYKMFPPSVNWDNIDWSTRRPQMDFPVQCVIC-SLEDVD-HIKPGKVTVS 287
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQ-----DSQAPLTRHWGWTLWRATIPVDP 369
GYA SGGG+ I RVD+++D G+ W A+ + + + +P + W W + T+ V
Sbjct: 288 GYAVSGGGRGIERVDISVDGGKNWIEASRSQKVGVPYVADSPSSDKWAWVFFEVTLNVQR 347
Query: 370 KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMF 403
T+ ++ +D A N P ++ ++
Sbjct: 348 NTEIIA----------KAVDSAANVQPGTVEEIW 371
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 480 HVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
+ EI +KAVDS+ N QP + IWNLRG+L+ ++HRV+V +
Sbjct: 348 NTEIIAKAVDSAANVQPGTVEEIWNLRGILNTSWHRVQVRV 388
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 109 IASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTP 148
IA Y EP+R P L+ + +P+NAEPP S L+ +++TP
Sbjct: 5 IAPSDYSQEPLRHPCLRINAKEPFNAEPPRSTLISSYVTP 44
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 391 ATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNAT 450
+ N D K +F ++ +R + CA + K VKG+ W +A+GNA
Sbjct: 68 SINGLIDNPKELFMKD-IRMLPKYNVTATLQCAGNRRTAMSKTKTVKGVGWDVSALGNAV 126
Query: 451 WTGARLVDVLKAAGI 465
W GA+L DVL+ GI
Sbjct: 127 WGGAKLADVLELVGI 141
>gi|403530784|ref|YP_006665313.1| Poly(A) polymerase [Bartonella quintana RM-11]
gi|403232855|gb|AFR26598.1| Poly(A) polymerase [Bartonella quintana RM-11]
Length = 417
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
DG +YD G D+ F+G P +RI+EDYLRILR+FRFFA P+ +
Sbjct: 135 DGNLYDAVGGLNDVASRTIRFIGIPENRIREDYLRILRFFRFFAWYGAGRPDVQGLKACV 194
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K+ GL +S ERIW E+ K+L +L M +L
Sbjct: 195 YLKH---GLQKLSSERIWGEMKKLLAAPNPTRALLWMRQSGIL 234
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 835 ELNKILGGSFSKEMMLK-MLEINMFPHLGTDETFATLDFEGLFRSMPIPFTLLFSANFFR 893
E +I+GG+ +++ + + +I++ + A ++ G F+++P +
Sbjct: 30 EEARIVGGAVRNQLLEQPISDIDVATTCFPQQVIARVEEAG-FKAIPTGIAFGTVTVVAQ 88
Query: 894 NLA-RITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+ + +TTLR D+ TDGRHA+V F DW+ DA RRD T+N+++
Sbjct: 89 SCSYEVTTLRSDIETDGRHAKVAFDRDWQKDAERRDFTMNALY 131
>gi|417110727|ref|ZP_11963788.1| poly(A) polymerase protein [Rhizobium etli CNPAF512]
gi|327188338|gb|EGE55555.1| poly(A) polymerase protein [Rhizobium etli CNPAF512]
Length = 425
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G V D G D++ F+GD +RI ED+LRILR+FRFFA P+ + +A
Sbjct: 141 GEVVDLVGGLADIEARNIRFIGDAATRIAEDHLRILRFFRFFAYYGSGRPDAEGLKACAA 200
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
++ L +S ER+W+EL K+LG + +L M
Sbjct: 201 ARSK---LKTLSAERVWSELRKLLGAADPGRALLWM 233
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGRHA+V F+ DWK DA RRDLT+N+++
Sbjct: 99 VTTLRTDVETDGRHAKVVFSTDWKADAERRDLTINALY 136
>gi|163795185|ref|ZP_02189153.1| poly A polymerase family protein [alpha proteobacterium BAL199]
gi|159179583|gb|EDP64112.1| poly A polymerase family protein [alpha proteobacterium BAL199]
Length = 413
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYD-YFNGHEDLKKGVCAFVGDPVSRIQEDYLRILR 686
E+ R LTL+ D DGT+YD G D + G FVGD +RI+ED LRILR
Sbjct: 118 EDAARRDLTLNALYLD----PDGTIYDPTGQGLVDARAGRIRFVGDAETRIREDVLRILR 173
Query: 687 YFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
+FRF+AR P + L+A + ++SGER+W EL K++
Sbjct: 174 FFRFWARFGEEPPDPVG--LAACAALASRVPSLSGERVWAELAKLV 217
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR DV TDGR A V FT+DW DA RRDLT+N+++L
Sbjct: 94 VTTLRRDVETDGRRAVVAFTDDWAEDAARRDLTLNALYL 132
>gi|383641368|ref|ZP_09953774.1| Polynucleotide adenylyltransferase region [Sphingomonas elodea ATCC
31461]
Length = 415
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++DYF G DL F+G P+ RI ED+LRILR+FRF AR + P+ L A
Sbjct: 136 GALFDYFGGLNDLAARRVRFIGAPLQRIAEDHLRILRFFRFLARFGDAPDGDG---LDAC 192
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL--------LFSKLKATTMR 761
L +S ERI EL K+L + ++ ML + + +L A R
Sbjct: 193 TIRARDLMALSRERIRDELLKLLVARETVGVVRLMLARGIFEPVVPEIRSADRLAALVAR 252
Query: 762 EYIV 765
E +V
Sbjct: 253 EALV 256
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 818 KKNLDGLHNISGERIWTELNKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLF 876
+ LD L + G L + +GG+ ++ + + ++++ L DE A L G+
Sbjct: 14 RAGLDTLTEVLGAH--EGLCRFVGGAVRDALLGIPVADLDLATALSPDEVMARLRAAGI- 70
Query: 877 RSMPIPFT-LLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
R++P +A +TTLR DV+TDGRHA V FT+DW+ DA RRD T+N+++
Sbjct: 71 RAVPTGLQHGTVTAVLESGPVEVTTLRRDVSTDGRHATVAFTDDWREDAARRDFTINALY 130
>gi|294085752|ref|YP_003552512.1| poly(A) polymerase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292665327|gb|ADE40428.1| putative poly(A) polymerase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 407
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++D NG +DL+ G+ FVGD R+QED LR+LRY RF R + + L+A
Sbjct: 147 GKIFDPLNGQDDLQAGILRFVGDADRRVQEDALRMLRYCRFLHRFGRGQID--ADALAAF 204
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
+ N ++SGER+ TE+ IL
Sbjct: 205 RRNASLAQHLSGERVRTEMELIL 227
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
IT R+D+ TDGRHA+V + DW DA RRD T+N++++
Sbjct: 105 ITHTRLDIETDGRHAKVTHSPDWLEDARRRDFTINAIYM 143
>gi|260576142|ref|ZP_05844135.1| Polynucleotide adenylyltransferase region [Rhodobacter sp. SW2]
gi|259021622|gb|EEW24925.1| Polynucleotide adenylyltransferase region [Rhodobacter sp. SW2]
Length = 380
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKE-EVLS 707
DG V D G DL FVGD +RI EDYLRILR+FRF A I +PN + E L+
Sbjct: 130 DGEVVDPMGGLADLMARQVRFVGDANARITEDYLRILRFFRFHA-IYGDPNGGIDAEGLA 188
Query: 708 AIKNNLDGLHNISGERIWTELNKIL 732
A N G+ +S ERI E+ K+L
Sbjct: 189 ACAANSAGIETLSCERITAEMRKLL 213
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R D+ T GRHA V F+ D DA RRDLT+N+++
Sbjct: 89 ITTFRRDIETHGRHATVAFSTDIADDATRRDLTMNALY 126
>gi|298247405|ref|ZP_06971210.1| Sulfite oxidase [Ktedonobacter racemifer DSM 44963]
gi|297550064|gb|EFH83930.1| Sulfite oxidase [Ktedonobacter racemifer DSM 44963]
Length = 362
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
G + L D S +++Q YK F P+ D + ++ LP+ + IC+P D + LE
Sbjct: 206 GTITLQDEPSHNYFQAQAYKLFPPNVTQAPTDTTQGKMLETLPLNAVICIP-QDGQ-TLE 263
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+ + GYA++G G I RV+V+ D+G TW +A T ++ W W W T+ +
Sbjct: 264 AGPVRILGYAFTGEGSPIQRVEVSADKGTTWTIATITERNDP------WAWCFWETTLNL 317
Query: 368 DP 369
P
Sbjct: 318 PP 319
>gi|402489036|ref|ZP_10835840.1| Polynucleotide adenylyltransferase region [Rhizobium sp. CCGE 510]
gi|401811983|gb|EJT04341.1| Polynucleotide adenylyltransferase region [Rhizobium sp. CCGE 510]
Length = 421
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
+G V D G D++ F+GD RI ED+LRILR+FRFFA P+ + S
Sbjct: 136 EGEVVDLVGGLADIEGRNIRFIGDAAKRIAEDHLRILRFFRFFAYYGSGRPDAEGLKACS 195
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
A ++ L +S ER+W+EL K+LG + +L M
Sbjct: 196 AARSK---LKMLSAERVWSELRKLLGAADPARALLWM 229
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSANF 891
+I+GG+ +M L + +I++ L E E +++P TL+
Sbjct: 34 RIVGGAVRNSLMDLPVSDIDIATTL-RPEAVMERAAEAGIKAVPTGLQHGTVTLVIDGKP 92
Query: 892 FRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
F +TTLR DV TDGRHA+V F+ DWK DA RRDLT+N+++
Sbjct: 93 FE----VTTLRTDVETDGRHAKVAFSTDWKADAERRDLTINALY 132
>gi|90422439|ref|YP_530809.1| polynucleotide adenylyltransferase region [Rhodopseudomonas
palustris BisB18]
gi|90104453|gb|ABD86490.1| Polynucleotide adenylyltransferase region [Rhodopseudomonas
palustris BisB18]
Length = 417
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S LDGT++DY G +D++ F+GDP RI EDYLRILR+FR A + ++
Sbjct: 130 SVSLDGTLHDYVGGLDDVEARRVRFIGDPDQRIAEDYLRILRFFRIHAAYGEGAPD-RDG 188
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKIL 732
L+ I+ DGL ++S ER+ E+ K++
Sbjct: 189 SLACIRGR-DGLASLSAERMRMEMLKLM 215
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV T GR A+V F EDW +DA RRD T+N++
Sbjct: 93 ITTLREDVETFGRKAKVAFGEDWAVDAQRRDFTMNAL 129
>gi|429207348|ref|ZP_19198607.1| tRNA nucleotidyltransferase [Rhodobacter sp. AKP1]
gi|428189723|gb|EKX58276.1| tRNA nucleotidyltransferase [Rhodobacter sp. AKP1]
Length = 380
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 597 HGYQLRIAGEGTVTAKVLSYRNRREKEDR---------IGENQPFRKLTLSVQDKDRSFR 647
HG IAG V +V ++R E R + E+ R T++ + S
Sbjct: 75 HGTVTVIAG--GVPHEVTTFRRDVETFGRHAVVAFSTDVAEDAARRDFTMNALYAEAS-- 130
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKE-EVL 706
G V D G DL FVGDP+ RI+EDYLRILR+FRF A I P+ + E L
Sbjct: 131 --GAVIDPLGGLPDLIARRVRFVGDPIRRIEEDYLRILRFFRFHA-IYGAPDEGLDAEGL 187
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
+A +G+ +S ER+ E+ K+L
Sbjct: 188 AACAARAEGVAQLSRERVGAEMRKLL 213
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV T GRHA V F+ D DA RRD T+N+++
Sbjct: 89 VTTFRRDVETFGRHAVVAFSTDVAEDAARRDFTMNALY 126
>gi|399057173|ref|ZP_10743800.1| tRNA nucleotidyltransferase/poly(A) polymerase [Novosphingobium sp.
AP12]
gi|398042207|gb|EJL35241.1| tRNA nucleotidyltransferase/poly(A) polymerase [Novosphingobium sp.
AP12]
Length = 390
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
L G ++D+F G +DL F+GD RI+ED+LRILRYFRF AR + P + + E S
Sbjct: 130 LTGEIFDWFGGRDDLDARRVRFIGDARQRIREDHLRILRYFRFQARFGSVPADGEAE--S 187
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A L +S ER+ E +LG +++M +L
Sbjct: 188 ACAELAATLKGLSRERVGMETMNLLGLPDPGPTVMRMAQLGVL 230
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 840 LGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPFT-LLFSANFFRNLAR 897
+GGS ++ L + +I+M L + L G+ RS+P +A
Sbjct: 30 VGGSVRDTLLGLPVKDIDMATVLRPEAVIERLKAAGI-RSVPTGIEHGTVTAVLPGGPVE 88
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGR A V F +DW+ DA RRD T+N+++
Sbjct: 89 ITTLRHDVSTDGRRATVAFADDWREDAARRDFTINALY 126
>gi|23016115|ref|ZP_00055875.1| COG0617: tRNA nucleotidyltransferase/poly(A) polymerase
[Magnetospirillum magnetotacticum MS-1]
Length = 435
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G VYD F+G D+ G FVG+P RI+ED LR+LRYFRF A + L A
Sbjct: 145 EGNVYDPFDGIADMAAGRVRFVGEPEKRIEEDALRLLRYFRFHAHYGRG-TAMEARALHA 203
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ L N+SGER+ EL ++L +L M + +L
Sbjct: 204 CRRMAGRLKNLSGERVAGELVRLLLADDPTPSLLVMHSRGIL 245
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 33/37 (89%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR+DV + GRHA +Q+T+DW++DA+RRD T+N++
Sbjct: 104 ITTLRVDVESFGRHARIQYTDDWRVDASRRDFTMNAL 140
>gi|149204355|ref|ZP_01881322.1| Poly A polymerase family protein [Roseovarius sp. TM1035]
gi|149142240|gb|EDM30287.1| Poly A polymerase family protein [Roseovarius sp. TM1035]
Length = 381
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G EDL+ F+ D RI+EDYLRILR+FRF A + E L+A
Sbjct: 130 DGAVVDPLGGLEDLRARRVRFIEDADQRIREDYLRILRFFRFHAWYGDPEGGLDAEGLAA 189
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
N++G+ +S ER+ E+ K+L
Sbjct: 190 CAGNVEGIVGLSRERVGAEMRKLL 213
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV T GRHA V F D + DA RRD T+N+++
Sbjct: 89 VTTFREDVQTFGRHAVVAFANDLRTDARRRDFTMNALY 126
>gi|332559679|ref|ZP_08414001.1| polynucleotide adenylyltransferase region [Rhodobacter sphaeroides
WS8N]
gi|332277391|gb|EGJ22706.1| polynucleotide adenylyltransferase region [Rhodobacter sphaeroides
WS8N]
Length = 380
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 597 HGYQLRIAGEGTVTAKVLSYRNRREKEDR---------IGENQPFRKLTLSVQDKDRSFR 647
HG IAG V +V ++R E R + E+ R T++ + S
Sbjct: 75 HGTVTVIAG--GVPHEVTTFRRDVETFGRHAVVAFSTDVAEDAARRDFTMNALYAEAS-- 130
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKE-EVL 706
G V D G DL FVGDP+ RI+EDYLRILR+FRF A I P+ + E L
Sbjct: 131 --GAVIDPLGGLPDLIARRVRFVGDPIRRIEEDYLRILRFFRFHA-IYGAPDEGLDAEGL 187
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
+A +G+ +S ER+ E+ K+L
Sbjct: 188 AACAARAEGVAQLSRERVGAEMRKLL 213
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV T GRHA V F+ D DA RRD T+N+++
Sbjct: 89 VTTFRRDVETFGRHAVVAFSTDVAEDAARRDFTMNALY 126
>gi|373501945|gb|AEY75245.1| nitrate reductase [Malus hupehensis]
Length = 903
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ ES +++ D + D + + + I EL + S I P +
Sbjct: 294 RIVVTTSESDNYYHFKDNRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEI 353
Query: 304 LKLEN----HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + H ++GYA+SGGGK + RV++T+D G TWHV Q+ ++W W
Sbjct: 354 LPINSYTTQHPYTIKGYAYSGGGKKVTRVEITMDGGDTWHVCTLDHQERPNKYGKYWCWC 413
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 414 FW---------SLEVEVLDLLAAKE 429
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+SD++ H +S+ W+V VYD T F+ HPGG I++ A E F A++
Sbjct: 522 YSMSDVKKHNSSQSA-WIVVHGHVYDCTRFLNDHPGGADSILINAGTDCTEEFDAIH--- 577
Query: 81 LQDEVFELLESYRIGNISQEDSKLAAKDIASDP 113
++ +++E YRIG + + A+ +S P
Sbjct: 578 -SEKAKKMIEDYRIGELVT--TNYASDSTSSSP 607
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%)
Query: 405 EEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
++ VR F + VCA KE VK G WG A + N+ W G L +VLK G
Sbjct: 155 DQLVREFKPREFPVTLVCAGNRRKEQNLVKQTIGFNWGAAGISNSVWRGIPLCEVLKRCG 214
Query: 465 I 465
I
Sbjct: 215 I 215
>gi|260888975|ref|ZP_05900238.1| polyA polymerase [Leptotrichia hofstadii F0254]
gi|260861035|gb|EEX75535.1| polyA polymerase [Leptotrichia hofstadii F0254]
Length = 585
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D + G +D+++ V FVG P RI+ED LRILR FRF +++
Sbjct: 113 RDFTINSIAYSEQTGIVDLYGGRQDIRRKVIRFVGKPKLRIEEDALRILRAFRFISKLGF 172
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
N + E AI L IS ERI+ EL+KIL G F K+ ++M
Sbjct: 173 NLDKKTAE---AIYKKRKFLTKISKERIFDELSKILMGKFVKKAFIEM 217
>gi|221640701|ref|YP_002526963.1| polynucleotide adenylyltransferase [Rhodobacter sphaeroides KD131]
gi|221161482|gb|ACM02462.1| Polynucleotide adenylyltransferase region [Rhodobacter sphaeroides
KD131]
Length = 380
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 597 HGYQLRIAGEGTVTAKVLSYRNRREKEDR---------IGENQPFRKLTLSVQDKDRSFR 647
HG IAG V +V ++R E R + E+ R T++ + S
Sbjct: 75 HGTVTVIAG--GVPHEVTTFRRDVETFGRHAVVAFSTDVAEDAARRDFTMNALYAEAS-- 130
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKE-EVL 706
G V D G DL FVGDP+ RI+EDYLRILR+FRF A I P+ + E L
Sbjct: 131 --GAVIDPLGGLPDLIARRVRFVGDPIRRIEEDYLRILRFFRFHA-IYGAPDEGLDAEGL 187
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
+A +G+ +S ER+ E+ K+L
Sbjct: 188 AACAARAEGVAQLSRERVGAEMRKLL 213
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV T GRHA V F+ D DA RRD T+N+++
Sbjct: 89 VTTFRRDVETFGRHAVVAFSTDVAEDAARRDFTMNALY 126
>gi|395789669|ref|ZP_10469179.1| hypothetical protein ME9_00896 [Bartonella taylorii 8TBB]
gi|395428507|gb|EJF94583.1| hypothetical protein ME9_00896 [Bartonella taylorii 8TBB]
Length = 417
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G +D+ F+G +RI+EDYLRILR+FRFFA P+ +
Sbjct: 136 GQLYDDVGGLDDIASRTVRFIGIAENRIREDYLRILRFFRFFAWYGAGRPDVQGLKACVY 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K DGL +S ERIW E+ K+L S +L M +L
Sbjct: 196 LK---DGLQKLSAERIWGEMKKLLAASDPTRALLWMRQSGIL 234
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ TDGRHA+V F DW+ DA RRD T+N+++
Sbjct: 94 ITTLRSDIETDGRHAKVAFGRDWQKDAERRDFTINALY 131
>gi|412986528|emb|CCO14954.1| nitrate reductase [Bathycoccus prasinos]
Length = 520
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 16/143 (11%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADA 302
++ ++D ES + + ND + P+ D + F + I +L + AI P +
Sbjct: 297 AEITVTDRESNNFYHFNDNRVLPPTVDAEIATKDKWWFKEEYIINQLNINGAIAYPAHEE 356
Query: 303 KLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQD-------SQAPLTRH 355
+K + ++GYA+SGGG+ ++R +V+ DQG +W +A+ ++ S RH
Sbjct: 357 VIKPSTKKYVMKGYAYSGGGRKVIRAEVSFDQGMSWKLADINVRETPRWAAGSSGDKARH 416
Query: 356 WGWTLWRATIPV----DPKTKEV 374
W W +W + DP KE+
Sbjct: 417 WCWCMWEYELDTAMLFDPSCKEI 439
>gi|424885450|ref|ZP_18309061.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393177212|gb|EJC77253.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 417
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
+G V D G D+++ F+GD RI ED+LRILR+FRFFA P+ + S
Sbjct: 132 EGEVVDLVGGLGDIERRNIRFIGDAAKRIAEDHLRILRFFRFFAYYGSGRPDAEGLKACS 191
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
A ++ L +S ER+W+EL K+L S +L M
Sbjct: 192 AARSK---LKTLSAERVWSELRKLLSASDPGRALLWM 225
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 837 NKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSAN 890
+++GG+ +M L + +I++ L + + G+ +++P TL+
Sbjct: 29 GRVVGGAVRNSLMDLPVSDIDIATTLRPETVMDRAEVAGI-KAVPTGLQHGTVTLVIDGK 87
Query: 891 FFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
F +TTLR DV TDGR A+V F+ DWK DA RRDLT+N+++
Sbjct: 88 PFE----VTTLRTDVETDGRRAKVAFSTDWKADAERRDLTINALY 128
>gi|83771221|dbj|BAE61353.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 279
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFA-------KSPAIQELPVISAICLPVAD 301
++ + DHES++ +QQ DYK P D VD A ++PA+ ++P+ S + +P
Sbjct: 115 RITVQDHESSNFYQQRDYKVLPP----DAVDSASAEPYWDRTPAMCDMPINSVVAVPGDG 170
Query: 302 AKLKL-ENHQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
+ L E+ +EV+GYA G + V V+ D G+TW A G + L R W W
Sbjct: 171 ETVHLSESSTLEVKGYAVPHGADGPVTGVQVSADGGQTWVDAEIEG----SSLERKWCWV 226
Query: 360 LWRATIPVDPKT 371
LWRA + V+ T
Sbjct: 227 LWRAKVRVEKGT 238
Score = 39.3 bits (90), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 433 VKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLD 472
+K V+G+ WG AA+ N W G RL DVL AG++ SLD
Sbjct: 5 LKEVQGIDWGDAAIMNCKWKGPRLRDVLLRAGVT--SSLD 42
>gi|163867932|ref|YP_001609136.1| poly(A) polymerase [Bartonella tribocorum CIP 105476]
gi|161017583|emb|CAK01141.1| poly(A) polymerase [Bartonella tribocorum CIP 105476]
Length = 417
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D++ F+G +RI EDYLRILR+FRFFA P+ E L A
Sbjct: 136 GNLYDDVGGLSDIESQTVRFIGVAENRISEDYLRILRFFRFFAWYGVGRPDG---EGLKA 192
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ERIW E+ K+L S +L M +L
Sbjct: 193 CVRLKDGLQKLSSERIWAEMKKLLLASDPTRALLWMRQSRIL 234
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F DWK DA RRD T+N+++
Sbjct: 94 VTTLRSDIETDGRHAKVAFGRDWKKDAERRDFTINALY 131
>gi|163745090|ref|ZP_02152450.1| polyA polymerase family protein, putative [Oceanibulbus indolifex
HEL-45]
gi|161381908|gb|EDQ06317.1| polyA polymerase family protein, putative [Oceanibulbus indolifex
HEL-45]
Length = 386
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 47/87 (54%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G DL F+ + RI+EDYLR LRYFRF A + + + L A
Sbjct: 131 DGQVLDPLGGLPDLHARRLRFIENAEQRIREDYLRTLRYFRFMAWYGSPQVGPEPDALDA 190
Query: 709 IKNNLDGLHNISGERIWTELNKILGGS 735
I +NLDGL +S ER+ E K+L S
Sbjct: 191 IASNLDGLETLSAERVGQEFRKLLRAS 217
Score = 46.2 bits (108), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGR A V F+ D DA RRD T+N+++
Sbjct: 90 ITTFRRDVETDGRRAVVAFSSDIAEDARRRDFTMNALY 127
>gi|126463626|ref|YP_001044740.1| polynucleotide adenylyltransferase [Rhodobacter sphaeroides ATCC
17029]
gi|126105290|gb|ABN77968.1| Polynucleotide adenylyltransferase region [Rhodobacter sphaeroides
ATCC 17029]
Length = 380
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 597 HGYQLRIAGEGTVTAKVLSYRNRREKEDR---------IGENQPFRKLTLSVQDKDRSFR 647
HG IAG V +V ++R E R + E+ R T++ + S
Sbjct: 75 HGTVTVIAG--GVPHEVTTFRRDVETFGRHAVVAFSTDVAEDAARRDFTMNALYAEAS-- 130
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKE-EVL 706
G V D G DL FVGDP+ RI+EDYLRILR+FRF A I P+ + E L
Sbjct: 131 --GAVIDPLGGLPDLIARRVRFVGDPIRRIEEDYLRILRFFRFHA-IYGAPDEGLDAEGL 187
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
+A +G+ +S ER+ E+ K+L
Sbjct: 188 AACAARAEGVAQLSRERVGAEMRKLL 213
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV T GRHA V F+ D DA RRD T+N+++
Sbjct: 89 VTTFRRDVETFGRHAVVAFSTDVAEDAARRDFTMNALY 126
>gi|82941457|dbj|BAE48793.1| sulfite oxidase [Codonopsis lanceolata]
Length = 396
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 23/149 (15%)
Query: 263 QNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGG 322
Q DYK F PS +W+ +D++ + PV IC + D + +++ ++ ++GYA SGGG
Sbjct: 238 QKDYKMFPPSVNWENIDWSSRRPQMDFPVQCVIC-SLEDVNV-VKHGKVAIKGYAVSGGG 295
Query: 323 KAIVRVDVTIDQGRTWHVAN--------FTGQDSQAPLTRHWGWTLWRATIPVDPKTKEV 374
+ I RVDV+ID G+TW A+ + D + W W + A + P + V
Sbjct: 296 RGIERVDVSIDGGKTWLEASRYQKPGIPYNADDES---SDKWAWVFFEAEADIPPSAEIV 352
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMF 403
+ +D A N P+ ++ ++
Sbjct: 353 A----------KAVDSAANVQPENVEVIW 371
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEIWSKAVDSS 528
EI +KAVDS+ N QPE+ IWNLRG+L+ ++HRV+V + +DS
Sbjct: 350 EIVAKAVDSAANVQPENVEVIWNLRGILNTSWHRVQVRVGHSNMDSG 396
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 390 FATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNA 449
F+ N ++ K +F ++ +R + CA + + VKG+ W +A+GNA
Sbjct: 67 FSINGLIEKPKELFMKD-IRNLPKYNVTAVLQCAGNRRTAMSKTRTVKGVGWDVSAIGNA 125
Query: 450 TWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
W GA+L DVL+ GI S+ +HV
Sbjct: 126 VWGGAKLADVLELVGIPKLTSVTPWGGKHVE 156
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 114 YVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTP 148
Y EP R P LK + +P+NAEPP S L+ +++TP
Sbjct: 10 YSEEPPRHPCLKINAKEPFNAEPPRSALITSYVTP 44
>gi|77464784|ref|YP_354288.1| Poly A polymerase [Rhodobacter sphaeroides 2.4.1]
gi|77389202|gb|ABA80387.1| Poly A polymerase family protein [Rhodobacter sphaeroides 2.4.1]
Length = 380
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 597 HGYQLRIAGEGTVTAKVLSYRNRREKEDR---------IGENQPFRKLTLSVQDKDRSFR 647
HG IAG V +V ++R E R + E+ R T++ + S
Sbjct: 75 HGTVTVIAG--GVPHEVTTFRRDVETFGRHAVVAFSTDVAEDAARRDFTMNALYAEAS-- 130
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKE-EVL 706
G V D G DL FVGDP+ RI+EDYLRILR+FRF A I P+ + E L
Sbjct: 131 --GAVIDPLGGLPDLIARRVRFVGDPIRRIEEDYLRILRFFRFHA-IYGAPDEGLDAEGL 187
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
+A +G+ +S ER+ E+ K+L
Sbjct: 188 AACAARAEGVAQLSRERVGAEMRKLL 213
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV T GRHA V F+ D DA RRD T+N+++
Sbjct: 89 VTTFRRDVETFGRHAVVAFSTDVAEDAARRDFTMNALY 126
>gi|408377555|ref|ZP_11175156.1| poly(A) polymerase [Agrobacterium albertimagni AOL15]
gi|407748546|gb|EKF60061.1| poly(A) polymerase [Agrobacterium albertimagni AOL15]
Length = 418
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVL 706
+DG V D G +D++ F+GD RI EDYLR+LR+FRFFA P+ L
Sbjct: 131 VDGEVIDLVGGLKDIETKTVRFIGDAEQRIAEDYLRVLRFFRFFAHYGSGRPDTDG---L 187
Query: 707 SAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A L ++S ER+W+E+ K+L +L M +L
Sbjct: 188 KACARARSQLKSLSAERVWSEIKKLLSARDPGRALLWMRQSGVL 231
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 11/108 (10%)
Query: 837 NKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSAN 890
+++GG+ +M L + +I++ L +E +G+ +++P TL+
Sbjct: 29 TRVVGGAVRNSLMGLPVGDIDLATTLMPEEVSGRAAAKGI-KAVPTGIEHGTVTLVVDGK 87
Query: 891 FFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+ +TTLR DV T+GRHAEV F W+ DA+RRDLT+N++++G+
Sbjct: 88 GYE----VTTLRRDVETNGRHAEVAFGASWQEDADRRDLTINALYVGV 131
>gi|359358706|gb|AEV40816.1| sulfite oxidase [Nicotiana benthamiana]
Length = 393
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 255 HESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQ 314
E + Q DYK F P+ +WD ++++ + PV AIC + D + +++ ++ ++
Sbjct: 230 EECQGFFVQKDYKMFPPTVNWDNINWSTRRPQMDFPVQCAIC-SLEDVSV-VKHGKITIK 287
Query: 315 GYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPL------TRHWGWTLWRATIPVD 368
GYA SGGG+ I RVDV+ID G+TW V Q + P + W W + A +
Sbjct: 288 GYAVSGGGRGIERVDVSIDGGKTW-VEATRYQTTGIPYIADDGSSDKWAWVFFEAEANI- 345
Query: 369 PKTKEV--SIMDMLMGKKPHDID 389
P++ E+ +D+ +P ID
Sbjct: 346 PQSAEIVAKAVDIAANVQPESID 368
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
EI +KAVD + N QPES +IWNLRG+L+ ++H V+V +
Sbjct: 350 EIVAKAVDIAANVQPESIDSIWNLRGILNTSWHPVQVRV 388
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVH 480
CA + + VKG+ W +A+GNA W GA+L DVLK GI S+ + +HV
Sbjct: 98 CAGNRRTAMSKSRTVKGVGWDISAIGNAVWGGAKLADVLKLVGIPYLTSITQSGGKHVE 156
>gi|254293106|ref|YP_003059129.1| polynucleotide adenylyltransferase [Hirschia baltica ATCC 49814]
gi|254041637|gb|ACT58432.1| Polynucleotide adenylyltransferase region [Hirschia baltica ATCC
49814]
Length = 428
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 658 GHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLH 717
G DL++ AF+GD +R++EDYLRILR+FRF A E LSA + GL
Sbjct: 148 GISDLREQKIAFIGDADTRLKEDYLRILRFFRFNA--WYGSGQLDVEGLSACLRHRAGLE 205
Query: 718 NISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVELMKYKEKSELI 777
IS ERIW+EL KIL + ++ M +L F +A + + L+ + + L
Sbjct: 206 TISVERIWSELKKILAARDPRVVLEAMSQTGVLQFVLSEAIGL-DLFNALVGLELEEHLA 264
Query: 778 KDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVLSAIKKNLD 822
D + L +P + ++I R+ N K+ +L+ D
Sbjct: 265 PDPYLRLLSLYPKDIDVISADVKRL-KMSNYEKKRLLATASDTTD 308
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR DV+TDGRHA V FT DW DA RRD VN+++ +
Sbjct: 97 ITTLRRDVSTDGRHATVAFTTDWTEDAKRRDFHVNALYCDL 137
>gi|16124663|ref|NP_419227.1| poly A polymerase [Caulobacter crescentus CB15]
gi|367465537|ref|YP_002515788.3| poly(A) polymerase/tRNA-nucleotidyltransferase [Caulobacter
crescentus NA1000]
gi|13421569|gb|AAK22395.1| poly A polymerase family protein [Caulobacter crescentus CB15]
gi|220962524|gb|ACL93880.1| poly(A) polymerase/tRNA-nucleotidyltransferase [Caulobacter
crescentus NA1000]
Length = 413
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 13/177 (7%)
Query: 649 DGTVYD-YFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN-PNNHKEEVL 706
DG VYD G D +G FVGDP++RI+EDYLRILR+FRF A P+
Sbjct: 132 DGRVYDPTGEGIRDAHEGRVVFVGDPMTRIREDYLRILRFFRFQAWYGRGEPDQKGLAAC 191
Query: 707 SAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL--LFSKLKATTMREYI 764
A+K + G + ER EL K+L + M ++L + +K+ E +
Sbjct: 192 KALKGMVSGR---AAERTQKELMKMLAADDPRPAFRLMAATSVLSSILPSVKSLARFEAL 248
Query: 765 VELMKYKEKSELIKDFHKWRLPTF-PMNGNIIRQFFARICNNPNNHKEEVLSAIKKN 820
V + E +L ++ RL P + + Q R+ PNN ++ ++ A+ KN
Sbjct: 249 VGI----ETEQLFENDPDLRLAALIPDDPKVAEQLAERL-RLPNNVRDRLVEAVGKN 300
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 831 RIWTELNKILGGSFSKEMMLKMLE-INMFPHLGTDETFATLDFEGLFRSMP--IPFTLLF 887
R + + +GG +M K ++ I++ L D L+ GL R++P + +
Sbjct: 23 RGYAGCARFVGGCVRNTLMGKPVDDIDIATTLTPDLVIDALEQAGL-RAIPTGVDHGTIT 81
Query: 888 SANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+ + R ITTLR DV+TDGR A V FT+DW DA RRD N+++
Sbjct: 82 AVSGGRPY-EITTLRKDVSTDGRRAVVAFTQDWNQDAERRDFRFNALY 128
>gi|393764630|ref|ZP_10353235.1| sulfite oxidase [Methylobacterium sp. GXF4]
gi|392729995|gb|EIZ87255.1| sulfite oxidase [Methylobacterium sp. GXF4]
Length = 361
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
++ + D S + Q +DYK F P +T D A I+ +P+ SAIC P A LK
Sbjct: 205 ARITVQDRPSDNPMQADDYKLFPPDVTAETADPAHGITIEAMPLNSAICEPARGAALKAG 264
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLW 361
H ++GYA + +A+ RVDV+ D GR+W A +D+ AP + WT W
Sbjct: 265 RHA--IRGYAIA-SDRAVARVDVSTDGGRSWAQARID-RDADAP----YAWTFW 310
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 398 QMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLV 457
++KA FA V + CA + V PV G W A+GNA WTG RL
Sbjct: 73 ELKARFAHATVTAVMQ--------CAGNRRADMLAVAPVSGDPWAPGAIGNAEWTGVRLA 124
Query: 458 DVLKAAGISPDQ 469
+VL+AAGI D+
Sbjct: 125 EVLRAAGIDADE 136
>gi|338737748|ref|YP_004674710.1| nucleotidyl transferase/polymerase [Hyphomicrobium sp. MC1]
gi|337758311|emb|CCB64136.1| putative nucleotidyl transferase/polymerase [Hyphomicrobium sp.
MC1]
Length = 418
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG VYD+ G +DL++ F+GD +RI+EDYLRILR+FRF A + L+A
Sbjct: 138 DGIVYDFVGGLDDLRQRRVRFIGDAEARIREDYLRILRFFRFSAEYGKGQLDPAG--LAA 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
DGL +S ER+ E+ K+L + +++ M +L
Sbjct: 196 ANALKDGLSLLSAERVRAEMLKLLAALNAVDVVNAMEKSGIL 237
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGRHA V FT W+ DA RRD T+N+++
Sbjct: 97 VTTLRHDVETDGRHAVVTFTTSWEEDAARRDFTINALY 134
>gi|15603895|ref|NP_220410.1| poly(A) polymerase (pcnB) [Rickettsia prowazekii str. Madrid E]
gi|383486874|ref|YP_005404554.1| poly(A) polymerase [Rickettsia prowazekii str. GvV257]
gi|383487445|ref|YP_005405124.1| poly(A) polymerase [Rickettsia prowazekii str. Chernikova]
gi|383488291|ref|YP_005405969.1| poly(A) polymerase [Rickettsia prowazekii str. Katsinyian]
gi|383489136|ref|YP_005406813.1| poly(A) polymerase [Rickettsia prowazekii str. Dachau]
gi|383500113|ref|YP_005413473.1| poly(A) polymerase [Rickettsia prowazekii str. RpGvF24]
gi|386081847|ref|YP_005998424.1| Poly(A) polymerase [Rickettsia prowazekii str. Rp22]
gi|3860586|emb|CAA14487.1| POLY(A) POLYMERASE (pcnB) [Rickettsia prowazekii str. Madrid E]
gi|292571611|gb|ADE29526.1| Poly(A) polymerase [Rickettsia prowazekii str. Rp22]
gi|380757239|gb|AFE52476.1| poly(A) polymerase [Rickettsia prowazekii str. GvV257]
gi|380757810|gb|AFE53046.1| poly(A) polymerase [Rickettsia prowazekii str. RpGvF24]
gi|380760324|gb|AFE48846.1| poly(A) polymerase [Rickettsia prowazekii str. Chernikova]
gi|380761170|gb|AFE49691.1| poly(A) polymerase [Rickettsia prowazekii str. Katsinyian]
gi|380762859|gb|AFE51378.1| poly(A) polymerase [Rickettsia prowazekii str. Dachau]
Length = 387
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF+G +DL++ F+G +RI+EDYLRILR+FRF + N + + +K
Sbjct: 135 IYDYFDGFKDLQRAKVVFIGKAFNRIKEDYLRILRFFRFSSYYANQLDYESFKACDTLKY 194
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
GL +S ERI +E++KI+ + +++ M
Sbjct: 195 ---GLKTLSRERIKSEIDKIIVSKRATQILEAMF 225
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V F++D+ DA RRD T+N++
Sbjct: 90 ITTLRKDIECNGRHAKVIFSKDFAEDAARRDFTINAL 126
>gi|383499269|ref|YP_005412630.1| poly(A) polymerase [Rickettsia prowazekii str. BuV67-CWPP]
gi|380762015|gb|AFE50535.1| poly(A) polymerase [Rickettsia prowazekii str. BuV67-CWPP]
Length = 387
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+YDYF+G +DL++ F+G +RI+EDYLRILR+FRF + N + + +K
Sbjct: 135 IYDYFDGFKDLQRAKVVFIGKAFNRIKEDYLRILRFFRFSSYYANQLDYESFKACDTLKY 194
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
GL +S ERI +E++KI+ + +++ M
Sbjct: 195 ---GLKTLSRERIKSEIDKIIVSKRATQILEAMF 225
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ +GRHA+V F++D+ DA RRD T+N++
Sbjct: 90 ITTLRKDIECNGRHAKVIFSKDFAEDAARRDFTINAL 126
>gi|407782863|ref|ZP_11130071.1| poly(A) polymerase [Oceanibaculum indicum P24]
gi|407204804|gb|EKE74784.1| poly(A) polymerase [Oceanibaculum indicum P24]
Length = 419
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGT+YD G D++ G FVG+ RIQED LR+LR+FRF A + EE L+A
Sbjct: 136 DGTLYDPVGGLADIETGRVRFVGEAERRIQEDVLRLLRFFRFHAHYGRMAPD--EEGLAA 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGG 734
K L N++GERI EL K+L
Sbjct: 194 CKRFAPLLPNLAGERIRDELLKLLAA 219
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR+DV TDGR A + +T+DW DA RRDLT+N++FL
Sbjct: 95 ITTLRVDVETDGRRARIAYTDDWAEDAKRRDLTMNALFL 133
>gi|449516258|ref|XP_004165164.1| PREDICTED: LOW QUALITY PROTEIN: nitrate reductase [NADH]-like
[Cucumis sativus]
Length = 956
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D K D + + + I EL + S I P +
Sbjct: 297 RIIVTTQESDSYYHYRDNKVLPSHVDEELANAEAWWYKPECIITELNINSVITTPCHEEI 356
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGGK + RV+VT+D G +WHV + + ++W W
Sbjct: 357 LPINSWTTQRPYTLRGYAYSGGGKKVTRVEVTLDGGESWHVCDLDCPEKATKYGKYWCWC 416
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 417 FW---------SLEVEVLDLLAAKE 432
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 28/130 (21%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+SD+Q H +S+ W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 526 YSISDVQKHNSDQSA-WIVVHGHVYDCTRFLKDHPGGMDSILINAGTDCTEEFDAIH--- 581
Query: 81 LQDEVFELLESYRIGNI--------SQEDSKLAAKDIASDPYVM-------------EPV 119
D+ ++LE YRIG + S ++ + +S+P++ E +
Sbjct: 582 -SDKAXKMLEEYRIGELITTGYISDSSPNNSIHGDSFSSNPHLAPITETRRVALIPREKI 640
Query: 120 RSPLLKATSL 129
R L+ TS+
Sbjct: 641 RCKLVSKTSI 650
>gi|149912910|ref|ZP_01901444.1| polyA polymerase family protein [Roseobacter sp. AzwK-3b]
gi|149813316|gb|EDM73142.1| polyA polymerase family protein [Roseobacter sp. AzwK-3b]
Length = 363
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVL 706
R DG + D G DLK F+ DP RI+EDYLRILR+FRF A + + L
Sbjct: 110 RPDGMLVDPLGGLSDLKARRVRFIDDPNQRIREDYLRILRFFRFHAWYGDPDMGLDADGL 169
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
+A+ ++DGL +S ER +E+ K+L
Sbjct: 170 AAVSEHVDGLAGLSRERTGSEIVKLL 195
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV T GRHA V +++D DA RRD T+N+++
Sbjct: 71 VTTFREDVETYGRHAVVAYSDDVMQDARRRDFTMNALY 108
>gi|449449725|ref|XP_004142615.1| PREDICTED: nitrate reductase [NADH]-like [Cucumis sativus]
gi|307949706|gb|ADN96688.1| nitrate reductase [Cucumis sativus]
Length = 956
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D K D + + + I EL + S I P +
Sbjct: 297 RIIVTTQESDSYYHYRDNKVLPSHVDEELANAEAWWYKPECIITELNINSVITTPCHEEI 356
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGGK + RV+VT+D G +WHV + + ++W W
Sbjct: 357 LPINSWTTQRPYTLRGYAYSGGGKKVTRVEVTLDGGESWHVCDLDCPEKATKYGKYWCWC 416
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 417 FW---------SLEVEVLDLLAAKE 432
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 28/130 (21%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+SD+Q H +S+ W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 526 YSISDVQKHNSDQSA-WIVVHGHVYDCTRFLKDHPGGMDSILINAGTDCTEEFDAIH--- 581
Query: 81 LQDEVFELLESYRIGNI--------SQEDSKLAAKDIASDPYVM-------------EPV 119
D+ ++LE YRIG + S ++ + +S+P++ E +
Sbjct: 582 -SDKAKKMLEEYRIGELITTGYISDSSPNNSIHGDSFSSNPHLAPITETRRVALIPREKI 640
Query: 120 RSPLLKATSL 129
R L+ TS+
Sbjct: 641 RCKLVSKTSI 650
>gi|559391|emb|CAA57198.1| unnamed protein product [Acidaminococcus fermentans DSM 20731]
Length = 256
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G + D F+G +DL+ V VGDP R ED LR+ R RF ++ P+ +L A
Sbjct: 45 EGHITDCFHGLDDLRGRVLRTVGDPDRRFSEDALRMFRACRFVGQLGFAPD---PAILPA 101
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMR 761
I NL + +S ER+ TELNK+L G+++ E M +L++ S L A + R
Sbjct: 102 IGRNLQKVPGLSLERVRTELNKLLMGTYAGEGM------DLMVKSGLAAESCR 148
>gi|433614188|ref|YP_007190986.1| tRNA nucleotidyltransferase/poly(A) polymerase [Sinorhizobium
meliloti GR4]
gi|429552378|gb|AGA07387.1| tRNA nucleotidyltransferase/poly(A) polymerase [Sinorhizobium
meliloti GR4]
Length = 419
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
+DG + D+ G D++ F+G R+ EDYLRILR+FRFFA + + E L
Sbjct: 131 VDGEIIDHVGGLGDIETRTVRFIGSAAERVAEDYLRILRFFRFFAHYGSGRPDA--EGLR 188
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A L +S ER+WTE K+L +L M +L
Sbjct: 189 ACAQARAKLATLSAERVWTETKKLLSADDPGRALLWMRQAGVL 231
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR DV TDGR AEV F DWK DA RRD T+N+++ G+
Sbjct: 91 ITTLRRDVATDGRRAEVAFGTDWKADAERRDFTINALYAGV 131
>gi|154246887|ref|YP_001417845.1| polynucleotide adenylyltransferase [Xanthobacter autotrophicus Py2]
gi|154160972|gb|ABS68188.1| Polynucleotide adenylyltransferase region [Xanthobacter
autotrophicus Py2]
Length = 406
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G DL F+GDP +RI+EDYLRILR FRF A P + K+ +++
Sbjct: 133 DGAVVDLVGGLSDLTARRIRFIGDPQARIREDYLRILRLFRFHAAYGAGPVD-KDAFIAS 191
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
++ GL +S ER+ TE+ K+L
Sbjct: 192 VRRRA-GLLTLSRERVRTEMLKLL 214
Score = 46.6 bits (109), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGR A V+F W DA RRD T+N+++
Sbjct: 92 VTTLREDMETDGRRAVVRFGRSWLHDAERRDFTLNALY 129
>gi|15966115|ref|NP_386468.1| hypothetical protein SMc02700 [Sinorhizobium meliloti 1021]
gi|334317120|ref|YP_004549739.1| Polynucleotide adenylyltransferase region [Sinorhizobium meliloti
AK83]
gi|384530248|ref|YP_005714336.1| Polynucleotide adenylyltransferase region [Sinorhizobium meliloti
BL225C]
gi|384535271|ref|YP_005719356.1| tRNA-nucleotidyltransferase/poly(A) polymerase [Sinorhizobium
meliloti SM11]
gi|407721422|ref|YP_006841084.1| hypothetical protein BN406_02213 [Sinorhizobium meliloti Rm41]
gi|15075385|emb|CAC46941.1| tRNA-nucleotidyltransferase/poly(A) polymerase [Sinorhizobium
meliloti 1021]
gi|333812424|gb|AEG05093.1| Polynucleotide adenylyltransferase region [Sinorhizobium meliloti
BL225C]
gi|334096114|gb|AEG54125.1| Polynucleotide adenylyltransferase region [Sinorhizobium meliloti
AK83]
gi|336032163|gb|AEH78095.1| tRNA-nucleotidyltransferase/poly(A) polymerase [Sinorhizobium
meliloti SM11]
gi|407319654|emb|CCM68258.1| hypothetical protein BN406_02213 [Sinorhizobium meliloti Rm41]
Length = 419
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
+DG + D+ G D++ F+G R+ EDYLRILR+FRFFA + + E L
Sbjct: 131 VDGEIIDHVGGLGDIETRTVRFIGSAAERVAEDYLRILRFFRFFAHYGSGRPDA--EGLR 188
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A L +S ER+WTE K+L +L M +L
Sbjct: 189 ACAQARAKLATLSAERVWTETKKLLSADDPGRALLWMRQAGVL 231
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR DV TDGR AEV F DWK DA RRD T+N+++ G+
Sbjct: 91 ITTLRRDVATDGRRAEVAFGTDWKADAERRDFTINALYAGV 131
>gi|395779595|ref|ZP_10460064.1| hypothetical protein MCW_00151 [Bartonella washoensis 085-0475]
gi|395419970|gb|EJF86255.1| hypothetical protein MCW_00151 [Bartonella washoensis 085-0475]
Length = 418
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN-PNNHKEEVLSA 708
G VYD G D+ F+G P +RI+EDYLRILR+FRFFA P+ +
Sbjct: 137 GNVYDSVGGLNDIASRTVRFIGIPENRIREDYLRILRFFRFFAWYGGGRPDVEGLKACVC 196
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K GL +S ER+W E+ K+L S +L M +L
Sbjct: 197 LKG---GLQKLSSERLWGEMKKLLTASDPTRALLWMRQSGIL 235
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F DW+ DA RRD T+N+++
Sbjct: 95 VTTLRSDIETDGRHAKVAFGCDWQKDAERRDFTINALY 132
>gi|284049150|ref|YP_003399489.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Acidaminococcus fermentans DSM 20731]
gi|283953371|gb|ADB48174.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Acidaminococcus fermentans DSM 20731]
Length = 481
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G + D F+G +DL+ V VGDP R ED LR+ R RF ++ P+ +L A
Sbjct: 130 EGHITDCFHGLDDLRGRVLRTVGDPDRRFSEDALRMFRACRFVGQLGFAPD---PAILPA 186
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMR 761
I NL + +S ER+ TELNK+L G+++ E M +L++ S L A + R
Sbjct: 187 IGRNLQKVPGLSLERVRTELNKLLMGTYAGEGM------DLMVKSGLAAESCR 233
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
++ DML+G+ P D D TNA P+++ + + +E G+ G V R+ ++ EV
Sbjct: 29 AVRDMLLGRTPDDYDVVTNARPEEIIRTAEDAGIPVVSELGQNFGVVILRV-ERHGVEVA 87
Query: 435 PVKGLTWG 442
+ T+G
Sbjct: 88 AYRNETYG 95
>gi|423712333|ref|ZP_17686635.1| hypothetical protein MCQ_01095 [Bartonella washoensis Sb944nv]
gi|395412207|gb|EJF78716.1| hypothetical protein MCQ_01095 [Bartonella washoensis Sb944nv]
Length = 418
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN-PNNHKEEVLSA 708
G VYD G D+ F+G P +RI+EDYLRILR+FRFFA P+ +
Sbjct: 137 GNVYDSVGGLNDIASRTVRFIGIPENRIREDYLRILRFFRFFAWYGGGRPDVEGLKACVC 196
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K GL +S ER+W E+ K+L S +L M +L
Sbjct: 197 LKG---GLQKLSSERLWEEMKKLLTASDPTRALLWMRQSGIL 235
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F DW+ DA RRD T+N+++
Sbjct: 95 VTTLRSDIETDGRHAKVAFGCDWQKDAERRDFTINALY 132
>gi|338973265|ref|ZP_08628632.1| tRNA nucleotidyltransferase [Bradyrhizobiaceae bacterium SG-6C]
gi|338233574|gb|EGP08697.1| tRNA nucleotidyltransferase [Bradyrhizobiaceae bacterium SG-6C]
Length = 417
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC-NNPNNHKEEVLS 707
DG V+D G D++ F+GDP RI EDYLRILR+FR A P+ E
Sbjct: 134 DGVVHDEVGGLADIEARRVRFIGDPARRIAEDYLRILRFFRIHAAYGEGTPDRAGYEACI 193
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL 751
A + DGL +S ERI E+ K++ + E ++ M LLL
Sbjct: 194 AGR---DGLAGLSAERIRMEMLKLMVAKRAAEALVAMDDAGLLL 234
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T GR A V F DW+ DA RRD T+N +F+
Sbjct: 93 VTTLREDIETFGRKATVAFGRDWRRDAMRRDFTMNGLFV 131
>gi|451854129|gb|EMD67422.1| hypothetical protein COCSADRAFT_168623 [Cochliobolus sativus
ND90Pr]
Length = 374
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 19/141 (13%)
Query: 256 ESTSHWQQNDYKGFSPSTD-------WDTVDFAKSPAIQELPVISAICLPVADAKLKLE- 307
ES +++QQ DYK P D W + K +I+E+PV S + +P + ++ +
Sbjct: 210 ESQNYYQQQDYKILPPEADSKEKAKEW----WGKVSSIEEMPVNSVVGIPKSGTTVQRDA 265
Query: 308 NHQMEVQGYAW-SGGGKAIVRVDVTIDQGRTWHVA----NFTGQDSQAPLTRHWGWTLWR 362
+ +EV+GYA SG IV+V+V++D G++W A + G+D++ + W W LW+
Sbjct: 266 DGTIEVRGYALPSGADGPIVKVEVSVDDGQSWEEAELINEYEGEDAKN-VELKWAWALWK 324
Query: 363 ATIPVDPKTKEVSIMDMLMGK 383
A + +D K K V+I M +
Sbjct: 325 ARVKID-KGKSVTIYSRAMDR 344
>gi|304322137|ref|YP_003855780.1| poly(A) polymerase [Parvularcula bermudensis HTCC2503]
gi|303301039|gb|ADM10638.1| possible poly(A) polymerase [Parvularcula bermudensis HTCC2503]
Length = 398
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 633 RKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFA 692
R T++ D+ +G +YDY +G DL F+G P RI+EDYLRILR+ RF A
Sbjct: 123 RDFTINALSLDK----EGRLYDYHDGRADLMARRVRFIGRPAQRIKEDYLRILRFMRFSA 178
Query: 693 RICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMM 741
R + + A+ GL ++S ERIW+E++++ + + ++
Sbjct: 179 RFGGTLDVAGWQASEALAG---GLLHLSKERIWSEVSRLFCAAGAPTVL 224
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 854 EINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSANFFRNLARITTLRIDVTTD 908
+I++ L +ET L G+ R +P T + SA F ITTLR DV TD
Sbjct: 50 DIDIATTLLPEETLKLLGRHGI-RVIPTGLEHGTVTAVLSAVPFE----ITTLRCDVATD 104
Query: 909 GRHAEVQFTEDWKLDANRRDLTVNSMFL 936
GRHA V FTEDW+ DA RRD T+N++ L
Sbjct: 105 GRHATVSFTEDWEKDAARRDFTINALSL 132
>gi|378826788|ref|YP_005189520.1| tRNA nucleotidyltransferase [Sinorhizobium fredii HH103]
gi|365179840|emb|CCE96695.1| similar to tRNA nucleotidyltransferase (CCA-adding enzyme)
[Sinorhizobium fredii HH103]
Length = 419
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++DY G D+++ F+G R+ EDYLRILR+FRFFA + + E L +
Sbjct: 133 GEIFDYVGGLPDIERRTLRFIGSAAERVAEDYLRILRFFRFFAHYGSGRPDA--EGLRSC 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
L +S ER+W E+ K+L +L M +L
Sbjct: 191 AQARAKLATLSAERVWGEMKKLLAAEDPGRALLWMRQAGVL 231
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
+TTLR DV TDGR AEV F DW DA RRD T+N+++ K
Sbjct: 91 VTTLRRDVATDGRRAEVAFGIDWNADAERRDFTINALYADAK 132
>gi|396498079|ref|XP_003845132.1| similar to sulfite oxidase [Leptosphaeria maculans JN3]
gi|312221713|emb|CBY01653.1| similar to sulfite oxidase [Leptosphaeria maculans JN3]
Length = 379
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 18/127 (14%)
Query: 256 ESTSHWQQNDYKGFSPSTD-------WDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
ES S++QQ+DYK P D W + K A+ ++P+ S I +P + ++++ +
Sbjct: 215 ESESYYQQHDYKILPPEADTKEKAEEW----WGKCEAMHDMPINSVIGVPKSHSRVERDG 270
Query: 309 HQM-EVQGYAW-SGGGKAIVRVDVTIDQGRTWHVA----NFTGQDSQAPLTRHWGWTLWR 362
M +V+GYA SG I +V+V+ D+G+TW A ++ G+D++ + W W LWR
Sbjct: 271 DGMIQVKGYALPSGADGPIAKVEVSADEGKTWVEAELHKSYEGEDAKH-VELKWAWALWR 329
Query: 363 ATIPVDP 369
A I V+P
Sbjct: 330 AKIKVEP 336
>gi|331270840|ref|YP_004397277.1| PolyA polymerase family protein [Clostridium botulinum BKT015925]
gi|329127558|gb|AEB77501.1| PolyA polymerase family protein [Clostridium botulinum BKT015925]
Length = 440
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 27/164 (16%)
Query: 589 RLAGIFEKHGYQLRIAG--EGTVTA-------KVLSYRNRREKEDRIGENQPFRKLTLSV 639
++ IF+ GY++ G GTVT +V +YR E ED N+ +K+ +
Sbjct: 52 KVVDIFQNLGYKIIPTGLKHGTVTIVINNEHYEVTTYRIDGEYED----NRHPKKVEFTR 107
Query: 640 QDKD----RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYF 688
K+ R F ++ Y DYFN DL+ G+ VGDP+ R ED LRILR +
Sbjct: 108 NLKEDLSRRDFTINSMAYNDKDGLVDYFNSKNDLESGIVKSVGDPMKRFSEDALRILRAY 167
Query: 689 RFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
RF A++ ++E LSA D L +IS ERI E++K+L
Sbjct: 168 RFAAQLGFVI---EDETLSATMQVKDNLKSISIERIRDEIDKML 208
>gi|402820613|ref|ZP_10870180.1| hypothetical protein IMCC14465_14140 [alpha proteobacterium
IMCC14465]
gi|402511356|gb|EJW21618.1| hypothetical protein IMCC14465_14140 [alpha proteobacterium
IMCC14465]
Length = 439
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 649 DGTVYDYF-----NGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHK 702
DGTV+D +G DL++ V F+G+P +RI EDYLR+LR+FRF A + + P++
Sbjct: 147 DGTVFDPLAACGTSGLADLEEQVVRFIGNPDTRIAEDYLRVLRFFRFSAHLQSDAPDDAS 206
Query: 703 EEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLF 752
+ + +GL +SGER+ E+ K+L + + + M LL F
Sbjct: 207 LKACARAATQKEGLLALSGERLAQEIFKLLAHPNAPQALELMQQAGLLPF 256
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ TDGRHA+V+F +DW+ DA RRD TVN+++
Sbjct: 106 ITTLREDIETDGRHAKVRFGQDWQADAERRDFTVNALY 143
>gi|418403961|ref|ZP_12977436.1| Polynucleotide adenylyltransferase region [Sinorhizobium meliloti
CCNWSX0020]
gi|359502101|gb|EHK74688.1| Polynucleotide adenylyltransferase region [Sinorhizobium meliloti
CCNWSX0020]
Length = 419
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
+DG + D+ G D++ F+G R+ EDYLRILR+FRFFA + + E L
Sbjct: 131 VDGEIIDHVGGLGDIETRTVRFIGSAAERVAEDYLRILRFFRFFAHYGSGRPDA--EGLR 188
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A L +S ER+WTE K+L +L M +L
Sbjct: 189 ACAQARAKLATLSAERVWTETKKLLSADDPGRALLWMRQAGVL 231
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
ITTLR DV TDGR AEV F DWK DA RRD T+N+++ G+
Sbjct: 91 ITTLRRDVATDGRRAEVAFGTDWKADAERRDFTINALYAGV 131
>gi|238502721|ref|XP_002382594.1| sulfite oxidase, putative [Aspergillus flavus NRRL3357]
gi|220691404|gb|EED47752.1| sulfite oxidase, putative [Aspergillus flavus NRRL3357]
Length = 383
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFA-------KSPAIQELPVISAICLPVAD 301
++ + DHES++ +QQ DYK P D VD A ++PA+ ++P+ S + +P
Sbjct: 219 RITVQDHESSNFYQQRDYKVLPP----DAVDSASAEPYWDRTPAMCDMPINSVVAVPGDG 274
Query: 302 AKLKL-ENHQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
+ L E+ +E++GYA G + V V+ D G+TW A G + L R W W
Sbjct: 275 ETVHLSESSTLEMKGYAVPHGADGPVTGVQVSADGGQTWVDAEIEG----SSLERKWCWV 330
Query: 360 LWRATIPVDPKT 371
LWRA + V+ T
Sbjct: 331 LWRAKVRVEKGT 342
>gi|424918685|ref|ZP_18342049.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|392854861|gb|EJB07382.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 421
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
+G V D G D+++ F+GD RI ED+LRILR+FRFFA P+ + S
Sbjct: 136 NGEVVDLVGGLADIERRNIRFIGDAAKRIAEDHLRILRFFRFFAYYGSGRPDAEGLKACS 195
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
A ++ L +S ER+W+EL K+L + +L M
Sbjct: 196 AARSK---LKTLSAERVWSELRKLLSAADPGRALLWM 229
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGRHA+V F+ DWK DA RRDLT+N+++
Sbjct: 95 VTTLRTDVETDGRHAKVAFSTDWKADAERRDLTMNALY 132
>gi|398354524|ref|YP_006399988.1| CCA-adding enzyme Cca [Sinorhizobium fredii USDA 257]
gi|390129850|gb|AFL53231.1| CCA-adding enzyme Cca [Sinorhizobium fredii USDA 257]
Length = 419
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G ++DY G D+ F+G R++EDYLRILR+FRFFA + E L A
Sbjct: 132 EGEIFDYVGGLHDIVSRTLRFIGSAAERVKEDYLRILRFFRFFAHYGQGRPDA--EGLKA 189
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
L +S ER+W E+ K+L +L M +L
Sbjct: 190 CAQARTMLSTLSAERVWGEMKKLLKAEDPGRALLWMRQSGVL 231
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGR AEV F DWK DA RRD T+N+++
Sbjct: 91 VTTLRRDVATDGRRAEVAFGTDWKADAERRDFTINALY 128
>gi|209550368|ref|YP_002282285.1| polynucleotide adenylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536124|gb|ACI56059.1| Polynucleotide adenylyltransferase region [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 422
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
+G V D G D+++ F+GD RI ED+LRILR+FRFFA P+ + S
Sbjct: 137 NGEVVDLVGGLADIERRNIRFIGDAAKRIAEDHLRILRFFRFFAYYGSGRPDAEGLKACS 196
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
A ++ L +S ER+W+EL K+L + +L M
Sbjct: 197 AARSK---LKTLSAERVWSELRKLLSAADPGRALLWM 230
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGRHA+V F+ DWK DA RRDLT+N+++
Sbjct: 96 VTTLRTDVETDGRHAKVAFSTDWKADAERRDLTMNALY 133
>gi|424896256|ref|ZP_18319830.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393180483|gb|EJC80522.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 425
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
+G V D G D+++ F+GD RI ED+LRILR+FRFFA P+ + S
Sbjct: 140 EGEVVDLVGGLADIERRNIRFIGDAAKRIAEDHLRILRFFRFFAYYGSGRPDAEGLKACS 199
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
A ++ L+ L S ER+W+EL K+L + +L M
Sbjct: 200 AARSKLEML---SAERVWSELRKLLSAADPGRALLWM 233
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Query: 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSANF 891
+++GG+ +M L + +I++ L + + G+ +++P TL+
Sbjct: 38 RVVGGAVRNSLMGLPVSDIDIATTLRPEMVMERAEAAGI-KAVPTGLQHGTVTLVIDGKP 96
Query: 892 FRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
F +TTLR DV TDGRHA+V F+ DWK DA RRDLT+N+++
Sbjct: 97 FE----VTTLRTDVETDGRHAKVAFSTDWKADAERRDLTINALY 136
>gi|414171714|ref|ZP_11426625.1| hypothetical protein HMPREF9695_00271 [Afipia broomeae ATCC 49717]
gi|410893389|gb|EKS41179.1| hypothetical protein HMPREF9695_00271 [Afipia broomeae ATCC 49717]
Length = 418
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN-PNNHKEEVLS 707
DGTV+D G D+ F+G+P RI EDYLRILR+FR A P+ E
Sbjct: 135 DGTVHDEVGGRADIAARRVRFIGEPSQRIAEDYLRILRFFRIHAAYGEGAPDRAGYEACI 194
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL 751
A + DGL +S ERI E+ K++ + E ++ M LLL
Sbjct: 195 AGR---DGLAELSAERIRLEMLKLMVAKGAAEALVAMDDAGLLL 235
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR D+ T GR A V F DW DA RRD T+N +
Sbjct: 94 VTTLREDIETFGRKARVAFGRDWTRDAMRRDFTINGL 130
>gi|158425129|ref|YP_001526421.1| poly(A) polymerase [Azorhizobium caulinodans ORS 571]
gi|158332018|dbj|BAF89503.1| putative poly(A) polymerase [Azorhizobium caulinodans ORS 571]
Length = 413
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V+D G DL F+GD +RI+ED+LRILR FRF A P + E L A
Sbjct: 134 DGLVFDPVGGLPDLMARRVRFIGDAETRIREDHLRILRLFRFHATYAKGPVD--AEALRA 191
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ GL +S ER+ EL K+L + + +++M LL
Sbjct: 192 AERLRAGLDQLSRERVRAELVKLLVARRAADTLVEMTDAGLL 233
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGRHA V+F DW DA RRD T+N+++
Sbjct: 93 VTTLREDVETDGRHAVVRFGRDWARDAARRDFTLNALY 130
>gi|254449556|ref|ZP_05062993.1| tRNA-nucleotidyltransferase 1 [Octadecabacter arcticus 238]
gi|198263962|gb|EDY88232.1| tRNA-nucleotidyltransferase 1 [Octadecabacter arcticus 238]
Length = 384
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 47/84 (55%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV D G DL F+ D RI+EDYLRILR+FRF+A + + +A
Sbjct: 130 DGTVIDPVGGIPDLHARHVRFINDADLRIREDYLRILRFFRFYAWFGDPDQGIDADGFAA 189
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
NLDGL ++ ER+ TEL K L
Sbjct: 190 CAANLDGLEGLAKERVRTELLKTL 213
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGRHA V F+ + DA RRD T+N+++
Sbjct: 89 ITTFRNDVETDGRHAVVAFSNTLQEDAVRRDFTMNALY 126
>gi|254460336|ref|ZP_05073752.1| tRNA-nucleotidyltransferase 1 [Rhodobacterales bacterium HTCC2083]
gi|206676925|gb|EDZ41412.1| tRNA-nucleotidyltransferase 1 [Rhodobacteraceae bacterium HTCC2083]
Length = 381
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D NG DL F+GD +RI+EDYLR LR+FRF A + + L+A+
Sbjct: 131 GFVVDPLNGMPDLNARHVRFIGDAEARIREDYLRSLRFFRFTAWYGDPGLGIDPDGLAAV 190
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
NLDGL +S ER+ +EL K++
Sbjct: 191 AANLDGLEGLSRERVGSELKKLM 213
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R D TDGRHA+V+F++ DA RRD T+N+++
Sbjct: 89 LTTFRSDTETDGRHAKVRFSKSILEDAARRDFTMNAIY 126
>gi|146323988|ref|XP_748123.2| sulfite oxidase [Aspergillus fumigatus Af293]
gi|129556379|gb|EAL86085.2| sulfite oxidase, putative [Aspergillus fumigatus Af293]
Length = 379
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLK 305
++ +SDHES + +QQ+DYK P + D ++ +A++P + ++P+ S + +P + +
Sbjct: 214 RITVSDHESPNFYQQHDYKVLPPAAVDQESAQPFWAQTPPMSDMPINSVVAVPEDNETVA 273
Query: 306 LENHQ-MEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
L + MEV+GYA G + RV V++D GRTW A + R W W LW A
Sbjct: 274 LSSSGVMEVKGYAVPHGADGPVTRVQVSVDGGRTWIDAKI---EESGDGNRRWCWVLWSA 330
Query: 364 TI 365
+
Sbjct: 331 AV 332
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 433 VKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQ 469
+K V+G+ WG AAV N W G RL DVL AG+ Q
Sbjct: 105 LKEVQGIDWGDAAVMNCKWRGPRLRDVLLRAGVKASQ 141
>gi|409438345|ref|ZP_11265424.1| Polynucleotide adenylyltransferase region [Rhizobium mesoamericanum
STM3625]
gi|408749896|emb|CCM76593.1| Polynucleotide adenylyltransferase region [Rhizobium mesoamericanum
STM3625]
Length = 417
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G V D G D+ K F+GD +R+ EDYLRILR+FRFFA P+ ++
Sbjct: 133 GEVIDMVGGLADIDKRNIRFIGDAATRVGEDYLRILRFFRFFAYYGSGRPDADGLRACAS 192
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ N L +S ER+W+EL K+L +L M +L
Sbjct: 193 ARAN---LKRLSAERVWSELRKLLSAEDPGRALLWMRQVGVL 231
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 17/121 (14%)
Query: 831 RIWTELN------KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPI-- 881
R++T LN +++GG+ +M L + +I++ L +E A G+ +++P
Sbjct: 17 RVFTLLNADGGEGRVVGGAVRNSLMGLAVNDIDIATTLTPEEVIARAAAAGV-KAVPTGV 75
Query: 882 ---PFTLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
TL+ F +TTLR DV TDGR A+V F+ DW+ DA RRDLT+N++++
Sbjct: 76 AHGTVTLVIDGKPFE----VTTLRADVETDGRRAKVAFSSDWQTDAERRDLTINALYVDA 131
Query: 939 K 939
K
Sbjct: 132 K 132
>gi|21165533|dbj|BAB93534.1| nitrate reductase [Solanum tuberosum]
Length = 911
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 310 RIVVTTQESESYYHYKDNRVLPPHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEI 369
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GYA+SGGGK + RV+VT+D G TW V + ++W W
Sbjct: 370 LPINAWTTQRPYTLRGYAYSGGGKKVTRVEVTLDGGETWSVCTLDHPEKPTKYGKYWCWC 429
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ ID N P+++
Sbjct: 430 FW---------SLEVEVLDLLSAKEIAVRAIDETHNTQPEKL 462
Score = 46.6 bits (109), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S W++ +YD + F++ HPGG I++ A E F A++
Sbjct: 539 YSMSEVRKHNS-SDSAWIIVHGHIYDASRFLKDHPGGVDSILINAGTDCTEEFDAIH--- 594
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 595 -SDKAKKLLEDFRIGEL 610
>gi|395793124|ref|ZP_10472529.1| hypothetical protein MEI_01150 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395431438|gb|EJF97456.1| hypothetical protein MEI_01150 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 417
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D+ F+G +RI+EDYLRILR+FRFFA P+ + +
Sbjct: 136 GCLYDDVGGLNDIASQTVRFIGIAENRIREDYLRILRFFRFFAWYGAGRPDVQGLKACVS 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K +GL +S ERIW E+ K+L S +L M +L
Sbjct: 196 LK---EGLQKLSSERIWAEMKKLLAASDPTRALLWMRQSGVL 234
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F DW+ DA RRD T+N+++
Sbjct: 94 VTTLRCDIETDGRHAKVAFGRDWQKDAERRDFTINALY 131
>gi|424871752|ref|ZP_18295414.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393167453|gb|EJC67500.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 417
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G V D G D+++ F+GD RI ED+LRILR+FRFFA P+ + SA
Sbjct: 133 GQVVDLVGGLADIERRNIRFIGDAAMRIAEDHLRILRFFRFFAYYGSGRPDAEGLKACSA 192
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
++ L ++S ER+W+EL K+L + +L M
Sbjct: 193 ARSK---LTSLSAERVWSELRKLLSAADPGRALLWM 225
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 837 NKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSAN 890
+++GG+ +M L + +I++ L + + G+ +++P TL+
Sbjct: 29 GRVVGGAVRNSLMGLPVNDIDIATTLRPEAVMERAEAAGI-KAVPTGLDHGTVTLVIDGK 87
Query: 891 FFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
F +TTLR DV TDGR A+V F+ DWK DA RRDLT+N+++
Sbjct: 88 PFE----VTTLRTDVETDGRRAKVAFSADWKADAERRDLTINALY 128
>gi|355398357|gb|AER70125.1| NR2-2/2HbN [Heterosigma akashiwo]
Length = 931
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAKL 304
+ +++ ES +H+ +D + P D DT + I +L + SAI P D +
Sbjct: 242 ISVTEVESDNHYHYHDNRVLPPQIDADTAKADGWWYKPEYIINDLNINSAITSPAHDEVV 301
Query: 305 KL---ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLW 361
+ + +GYA+SGGG+ + RV+++ D+G TW + T + +HW W W
Sbjct: 302 TIIPGQKATYACKGYAYSGGGRKVTRVELSFDEGETWELTTLTHPERPTRAGKHWCWCFW 361
Query: 362 RATIPV 367
+P+
Sbjct: 362 EYEVPI 367
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK G WG AAV + WTG R+ DVL+ G+
Sbjct: 121 VCAGNRRKEQNSVKQGIGFNWGPAAVSTSVWTGVRVRDVLEYCGL 165
>gi|240129576|gb|ACS44801.1| nitrate reductase [Heterosigma akashiwo]
Length = 824
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAKL 304
+ +++ ES +H+ +D + P D DT + I +L + SAI P D +
Sbjct: 242 ISVTEVESDNHYHYHDNRVLPPQIDADTAKADGWWYKPEYIINDLNINSAITSPAHDEVV 301
Query: 305 KL---ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLW 361
+ + +GYA+SGGG+ + RV+++ D+G TW + T + +HW W W
Sbjct: 302 TIIPGQKATYACKGYAYSGGGRKVTRVELSFDEGETWELTTLTHPERPTRAGKHWCWCFW 361
Query: 362 RATIPV 367
+P+
Sbjct: 362 EYEVPI 367
Score = 43.5 bits (101), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK G WG AAV + WTG R+ DVL+ G+
Sbjct: 121 VCAGNRRKEQNSVKQGIGFNWGPAAVSTSVWTGVRVRDVLEYCGL 165
>gi|423713661|ref|ZP_17687921.1| hypothetical protein ME1_00667 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395422132|gb|EJF88348.1| hypothetical protein ME1_00667 [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 417
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D+ F+G +RI+EDYLRILR+FRFFA P+ + +
Sbjct: 136 GCLYDDVGGLNDIASRTVRFIGIAENRIREDYLRILRFFRFFAWYGAGRPDVQGLKACVS 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K +GL +S ERIW E+ K+L S +L M +L
Sbjct: 196 LK---EGLQKLSSERIWAEMKKLLAASDPTRALLWMRQSGVL 234
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F DW+ DA RRD T+N+++
Sbjct: 94 VTTLRCDIETDGRHAKVAFGRDWQKDAERRDFTINALY 131
>gi|355398355|gb|AER70124.1| NR2-2/2HbN [Heterosigma akashiwo]
Length = 931
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAKL 304
+ +++ ES +H+ +D + P D DT + I +L + SAI P D +
Sbjct: 242 ISVTEVESDNHYHYHDNRVLPPQIDADTAKADGWWYKPEYIINDLNINSAITSPAHDEVV 301
Query: 305 KL---ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLW 361
+ + +GYA+SGGG+ + RV+++ D+G TW + T + +HW W W
Sbjct: 302 TIIPGQKATYACKGYAYSGGGRKVTRVELSFDEGETWELTTLTHPERPTRAGKHWCWCFW 361
Query: 362 RATIPV 367
+P+
Sbjct: 362 EYEVPI 367
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK G WG AAV + WTG R+ DVL+ G+
Sbjct: 121 VCAGNRRKEQNSVKQGIGFNWGXAAVSTSVWTGVRVRDVLEYXGL 165
>gi|384249805|gb|EIE23286.1| nitrate reductase, partial [Coccomyxa subellipsoidea C-169]
Length = 858
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++ ++ ES + + +D + P D + + I EL + +AI P D
Sbjct: 288 EISVAPEESQNFYHFHDNRVLPPGVDQEKAKAEGWWYRPEFIINELNINAAISSPSHDDI 347
Query: 304 LKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
+ L V+GYA+SGGG+ ++R ++++D G TW +A+ + P ++W W W
Sbjct: 348 VPLTMQPYTVRGYAYSGGGRKVIRCELSLDGGETWRLADIQRHEKATPYNKYWCWVFWSV 407
Query: 364 TIPV 367
+P
Sbjct: 408 EVPA 411
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 19 TLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAM 76
LP Y+L ++ H D + S W V+ VYD T+F+ HPGG I++ A + + F A
Sbjct: 511 ALPAYTLEQVEEH-DTRESSWFVYEGKVYDATKFLNDHPGGPESILIVAGQDASDEFNA- 568
Query: 77 YGVHLQDEVFELLESYRIGNISQEDSKLA 105
+H Q + ++L Y IG + +K A
Sbjct: 569 --IHSQ-KAKKMLADYLIGRVGDAPAKEA 594
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI-SPDQSLDSADVQHV 479
VCA KE VK G WG AV WTG RL D+LK G +P + + V
Sbjct: 164 VCAGNRRKEQNIVKKSVGFNWGPTAVSTTYWTGVRLCDLLKHCGAKTPMEGARYVHFRGV 223
Query: 480 HVEIWSKAVDSSYNT 494
E+ + D SY T
Sbjct: 224 QKEL-PQGADGSYGT 237
>gi|350591374|ref|XP_003483255.1| PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like,
partial [Sus scrofa]
Length = 245
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 14/139 (10%)
Query: 797 QFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLEIN 856
+F+ +I + P +H E L AI +N GL ISGERIW EL KIL G+ ++ M +++
Sbjct: 14 RFYGKIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILTGNHVNHLIHLMYDLD 73
Query: 857 MFPHLGTDETFATLDFEGLFRSM----PIPFTLLFSANFFRNLARITT--LRIDVTTDGR 910
+ P++G + +F + +++ P P TLL S FR +T LR+ ++ + +
Sbjct: 74 VAPYIGLPANASLEEFNKVSKNVEGFSPKPMTLLTS--LFRVQDDVTKLDLRLKISKEEK 131
Query: 911 HAEVQFTEDWKLDANRRDL 929
+ + + NR+DL
Sbjct: 132 NLGLFIVK------NRKDL 144
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 682 LRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
LRIL + RF+ +I + P +H E L AI N GL ISGERIW EL KIL G+
Sbjct: 8 LRIL-FCRFYGKIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILTGN 60
>gi|395788355|ref|ZP_10467919.1| hypothetical protein ME7_01254 [Bartonella birtlesii LL-WM9]
gi|395408272|gb|EJF74883.1| hypothetical protein ME7_01254 [Bartonella birtlesii LL-WM9]
Length = 418
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G +D+ F+G +RI+EDYLRILR+FRFFA P+ + +
Sbjct: 136 GFLYDDVGGLKDIASRTVRFIGIAENRIREDYLRILRFFRFFAWYGMGRPDVQGLKACAC 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K DGL +S ERIW E+ K+L +L M +L
Sbjct: 196 LK---DGLQKLSAERIWVEMKKLLTAVDPTRALLWMRQSGIL 234
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGRHA+V F DW+ DA RRD T+N+++
Sbjct: 94 VTTLRSDVETDGRHAKVVFGRDWQKDAERRDFTINALY 131
>gi|413939107|gb|AFW73658.1| hypothetical protein ZEAMMB73_457777 [Zea mays]
Length = 890
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D D + + I EL + S I P D
Sbjct: 289 RIIVASSESESYYHYRDNRVLPSHVDADLANAEAWWYKPECMINELNINSVITTPGHDEV 348
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GYA+SGGG+ + RV+VT+D G TWHV + + ++W W
Sbjct: 349 LPINALTTQRPYTIKGYAYSGGGRKVTRVEVTLDGGETWHVCSLDHPERPTKYGKYWCWC 408
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + +V ++D+L K+ D A N P+++
Sbjct: 409 FW---------SVDVEVLDVLGAKEIAVRAWDEAMNTQPEKL 441
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
Y++S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 518 YTMSEVRRHTSPDSA-WIIVHGHIYDCTGFLKDHPGGADSILINAGTDCTEEFDAIH--- 573
Query: 81 LQDEVFELLESYRIGNISQEDSKLAAKDIASD 112
D+ LLE YR+G + S + ++ +D
Sbjct: 574 -SDKARGLLEMYRVGELVVTGSDYSPQNSHAD 604
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE V+ G WG A+ + W GARL DVL+ G+
Sbjct: 165 VCAGNRRKEQNMVRQTVGFNWGPGAISTSVWRGARLRDVLRRCGV 209
>gi|393769064|ref|ZP_10357592.1| polynucleotide adenylyltransferase [Methylobacterium sp. GXF4]
gi|392725305|gb|EIZ82642.1| polynucleotide adenylyltransferase [Methylobacterium sp. GXF4]
Length = 413
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S DG ++D G DL G F+GDP +RI+ED LRILR+FRF AR P +
Sbjct: 133 SLGADGRLHDTVGGLPDLAAGRVRFIGDPATRIREDALRILRFFRFHARFGAGPPDAAAL 192
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKIL 732
D L +S ER+ E K+L
Sbjct: 193 AACIAAR--DALDRLSRERVRAEFLKLL 218
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLR DV TDGRHA V+F D+ DA RRD TVN++ LG
Sbjct: 96 VTTLREDVETDGRHAVVRFGGDFARDAERRDFTVNALSLG 135
>gi|89067444|ref|ZP_01154957.1| polyA polymerase family protein [Oceanicola granulosus HTCC2516]
gi|89047013|gb|EAR53067.1| polyA polymerase family protein [Oceanicola granulosus HTCC2516]
Length = 383
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGT+ D G DL++ F+GD +RI+EDYLRILR+FRF A + + L+A
Sbjct: 131 DGTIADPIGGLPDLRRRQVRFIGDAEARIREDYLRILRFFRFHAWYGDAGAGLDADGLAA 190
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
+++G+ +S ERI E+ ++L
Sbjct: 191 CAQHVEGVAGLSRERIGHEMLRLL 214
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F + + DA RRD T+N+++
Sbjct: 90 VTTFRRDVETDGRRAVVAFADSLEEDARRRDFTMNALY 127
>gi|83313257|ref|YP_423521.1| tRNA nucleotidyltransferase/poly(A) polymerase [Magnetospirillum
magneticum AMB-1]
gi|82948098|dbj|BAE52962.1| tRNA nucleotidyltransferase/poly(A) polymerase [Magnetospirillum
magneticum AMB-1]
Length = 435
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G VYD F+G D+ G FVG+P RI+ED LR+LR+FRF A + L+A
Sbjct: 145 EGNVYDPFDGIADMAAGRVRFVGEPEKRIEEDALRLLRFFRFHAHYGRG-IAMETRALNA 203
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ D L +SGER+ EL ++L +L M +L
Sbjct: 204 CRRMADRLKGLSGERVAGELVRLLLADDPTPSLLVMHSHGIL 245
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 32/37 (86%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR+DV + GRHA +++T+DW+ DA+RRD T+N++
Sbjct: 104 ITTLRVDVESFGRHARIEYTDDWRADASRRDFTMNAL 140
>gi|351724693|ref|NP_001238090.1| inducible nitrate reductase [NADH] 1 [Glycine max]
gi|1709267|sp|P54233.1|NIA1_SOYBN RecName: Full=Inducible nitrate reductase [NADH] 1; Short=NR
gi|1262166|gb|AAA96727.1| nitrate reductase [Glycine max]
Length = 886
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++++++HE SH+ D + D + + + I EL + S I P +
Sbjct: 287 RIVVTEHECDSHYHYKDNRVLPSHVDAELANDEGWWYKPEYIINELNINSVITTPCHEEI 346
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGG+ + RV+VT+D G TW V + ++W W
Sbjct: 347 LPINSWTTQMPYFIRGYAYSGGGRKVTRVEVTLDGGGTWQVCTLDCPEKPNKYGKYWCWC 406
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W EV ++D+L ++ D A N P+++
Sbjct: 407 FWSV---------EVEVLDLLGAREIAVRAWDEALNTQPEKL 439
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
Y++S+++ H + S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 516 YTMSEVRRHNNADSA-WIIVHGHVYDWTRFLKDHPGGTDRILINAGTDCTEEFEAIH--- 571
Query: 81 LQDEVFELLESYRIGNIS 98
D+ ++LE YRIG ++
Sbjct: 572 -SDKAKQMLEDYRIGELT 588
>gi|21165531|dbj|BAB93533.1| nitrate reductase [Solanum tuberosum]
Length = 750
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 149 RIVVTTQESESYYHYKDNRVLPPHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEI 208
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK + RV+VT+D G TW V + ++W W
Sbjct: 209 LPINAWTTQRPYTLRGYAYSGGGKKVTRVEVTLDGGETWSVCTLDHPEKPTKYGKYWCWC 268
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ ID N P+++
Sbjct: 269 FW---------SLEVEVLDLLSAKEIAVRAIDETHNTQPEKL 301
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S W++ +YD + F++ HPGG I++ A E F A++
Sbjct: 378 YSMSEVRKHNS-SDSAWIIVHGHIYDASRFLKDHPGGVDSILINAGTDCTEEFDAIH--- 433
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 434 -SDKAKKLLEDFRIGEL 449
>gi|159125954|gb|EDP51070.1| sulfite oxidase, putative [Aspergillus fumigatus A1163]
Length = 379
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLK 305
++ +SDHES + +QQ+DYK P + D ++ +A++P + ++P+ S + +P + +
Sbjct: 214 RITVSDHESPNFYQQHDYKVLPPAAVDQESAQPFWAQTPPMSDMPINSVVAVPEDNETVA 273
Query: 306 LENHQ-MEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
L + MEV GYA G + RV V++D GRTW A + R W W LW A
Sbjct: 274 LSSSGVMEVTGYAVPHGADGPVTRVQVSVDGGRTWIDAKI---EESGEGNRRWCWVLWSA 330
Query: 364 TI 365
+
Sbjct: 331 AV 332
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 433 VKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQ 469
+K V+G+ WG AAV N W G RL DVL AG+ Q
Sbjct: 105 LKEVQGIDWGDAAVMNCKWRGPRLRDVLLRAGVKASQ 141
>gi|383773769|ref|YP_005452835.1| poly(A) polymerase [Bradyrhizobium sp. S23321]
gi|381361893|dbj|BAL78723.1| poly(A) polymerase [Bradyrhizobium sp. S23321]
Length = 418
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G VYDY G D F+GDP RI ED+LRILR+FR A + ++ L+ I
Sbjct: 136 GVVYDYVGGIADAAARRVRFIGDPDQRIAEDFLRILRFFRIHAAFGAGAPD-RDGYLACI 194
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ GL ++S ER+ E+ K+L + + L M LL
Sbjct: 195 RGRA-GLASLSAERVRMEMLKLLAAGGASDAALAMAEGGLL 234
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR D T GR A V F DW DA RRD T+N +
Sbjct: 94 VTTLREDTETFGRKARVAFGRDWVRDAERRDFTMNGL 130
>gi|159046029|ref|YP_001534823.1| CCA-adding enzyme [Dinoroseobacter shibae DFL 12]
gi|157913789|gb|ABV95222.1| CCA-adding enzyme [Dinoroseobacter shibae DFL 12]
Length = 382
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D G DL+ F+ DP +RI+EDYLRILR+FRF A + E L+A
Sbjct: 131 GEVVDPLGGLPDLEARKVRFIDDPEARIREDYLRILRFFRFTAWYGDPAKGIDAEGLTAC 190
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
DGL +S ER+ EL K+L
Sbjct: 191 AALADGLQTLSTERVTAELLKLL 213
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F +D DA RRD T+N+++
Sbjct: 89 VTTFRRDVATDGRRATVAFAKDVAEDARRRDFTMNALY 126
>gi|399923607|ref|ZP_10780965.1| poly a polymerase family protein [Peptoniphilus rhinitidis 1-13]
Length = 440
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
D + E+ R T++ D S G VYD F G +DL+K VGDP+ RI+ED +R
Sbjct: 101 DNLTEDLKRRDFTINAMAIDES----GKVYDPFGGKDDLRKKTIRAVGDPIKRIREDAIR 156
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLK 743
I+R RF R+ + EE+ AI + L IS ERI+ E +K++ +L
Sbjct: 157 IMRAIRFAGRLDFYID---EELFDAISTERELLKKISPERIFEEFSKMITSDRPSSYLLI 213
Query: 744 MLYQNLL--LFSKLKATT 759
M +L +F +LK T
Sbjct: 214 MEETGVLDVIFPELKRTV 231
>gi|125579223|gb|EAZ20369.1| hypothetical protein OsJ_35979 [Oryza sativa Japonica Group]
Length = 402
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 263 QNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGG 322
Q DYK F PS DWD + ++ + PV SAIC + D + ++ V GYA SGGG
Sbjct: 244 QKDYKMFPPSVDWDNIVWSTRKPQMDYPVQSAIC-SLEDTNAIIPG-EVTVTGYALSGGG 301
Query: 323 KAIVRVDVTIDQGRTWHVANFTGQDSQAPL------TRHWGWTLWRATIPVDPKTKEVSI 376
+ I RVD++ D G+TW A Q P + W W L++ I V T+ +
Sbjct: 302 RGIERVDISTDGGKTWFGA-VRYQKEGVPYVAGDISSDKWAWVLFKTVIDVKGDTEVIV- 359
Query: 377 MDMLMGKKPHDIDFATNATPDQMKAMF 403
+D + N P+ ++ ++
Sbjct: 360 ---------KAVDSSANVQPESVETIW 377
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
E+ KAVDSS N QPES IWNLRG+L+ +HRVR+
Sbjct: 356 EVIVKAVDSSANVQPESVETIWNLRGILNTCWHRVRL 392
Score = 43.5 bits (101), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHV 479
CA E + + V+G+ W A+GNATW GA+L DVL+ G+ + + +HV
Sbjct: 112 CCAGNRRTEMSKSRKVRGVGWDVCALGNATWGGAKLSDVLQLIGVPYHTEITPSGGKHV 170
>gi|75676806|ref|YP_319227.1| polynucleotide adenylyltransferase [Nitrobacter winogradskyi
Nb-255]
gi|74421676|gb|ABA05875.1| polynucleotide adenylyltransferase region [Nitrobacter winogradskyi
Nb-255]
Length = 418
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
GTV+D+ G +D+ F+GDP RI EDYLRILR+FR A P+ ++ L+
Sbjct: 136 GTVHDHVGGLDDIAARRVRFIGDPDRRIAEDYLRILRFFRIHAAYGAGEPD--RDGYLAC 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVELM 768
I+ GL +S ER+ E+ K+L + E + M LLL + R + +M
Sbjct: 194 IRGRA-GLATLSAERLRAEILKLLLADGAVEAAVAMEDGGLLL-AVFGGVAYRGPLAAMM 251
Query: 769 KYKEKSELIKD 779
+ EL D
Sbjct: 252 AAESALELAPD 262
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 24/37 (64%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR DV T GR A V F DW DA RRD T+N +
Sbjct: 94 VTTLREDVETFGRKARVAFGRDWARDAQRRDFTINGL 130
>gi|407920710|gb|EKG13892.1| HAT domain-containing protein [Macrophomina phaseolina MS6]
Length = 179
Score = 67.8 bits (164), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 250 VILSDHESTSHWQQNDYKGFSPST-DWDTVD--FAKSPAIQELPVISAICLPVADAKLKL 306
+ + HES +H+Q+ DYK P+ D + +A P + ++PV S I +P + +++
Sbjct: 9 ITVHPHESPNHYQRRDYKLLPPTCLDGAAAEKWWALLPPLMDMPVNSVIGIPASASRVTA 68
Query: 307 ENHQ--MEVQGYAWSGGGKAIV-RVDVTIDQGRTWHVANFTGQD---SQAPLTRHWGWTL 360
+ +EV GYA GG V RV+V+ D+GRTW A G + L+ W W+L
Sbjct: 69 SSTDGTIEVAGYALPGGRNGPVRRVEVSGDEGRTWTDAEILGPPKDVEEMGLSLKWAWSL 128
Query: 361 WRATIPVD 368
WRA + V+
Sbjct: 129 WRARVRVE 136
>gi|430004288|emb|CCF20081.1| Poly(A) polymerase [Rhizobium sp.]
Length = 420
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D G D++ F+GD +RI EDYLR+LR+FRFFA + + + L A
Sbjct: 133 GDVIDLVGGLADIETRNVRFIGDAAARIAEDYLRVLRFFRFFAYYGDGRPDA--DGLRAS 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L +S ERIW+E K+L +L M +L
Sbjct: 191 ARAKDKLGTLSAERIWSETKKLLAAPDPSRALLWMRQTGVL 231
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 17/126 (13%)
Query: 816 AIKKNLDGLHNISGERIWTELNKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEG 874
A+++ +D L+ GE +++GG+ +M + + ++++ L +E G
Sbjct: 14 ALRRIMDVLNAEGGE------ARVVGGAVRNALMGMPVGDVDIATTLRPEEVVERAKTAG 67
Query: 875 LFRSMPIPF-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDL 929
+ +++P TL+ F +TTLR DV TDGR A+V + DW +DA RRDL
Sbjct: 68 I-KAVPTGIDHGTVTLVLDGQGFE----VTTLRRDVETDGRRAQVAYGTDWTVDAERRDL 122
Query: 930 TVNSMF 935
T+N+++
Sbjct: 123 TINALY 128
>gi|49474494|ref|YP_032536.1| poly(A) polymerase [Bartonella quintana str. Toulouse]
gi|49239998|emb|CAF26412.1| Poly(A) polymerase [Bartonella quintana str. Toulouse]
Length = 417
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D+ F+G P +RI+EDYLRILR+FRFFA P+ +
Sbjct: 136 GNLYDAVGGLNDVASRTIRFIGIPENRIREDYLRILRFFRFFAWYGAGRPDVQGLKACVY 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K+ GL +S ERIW E+ K+L +L M +L
Sbjct: 196 LKH---GLQKLSSERIWGEMKKLLAAPNPTRALLWMRQSGIL 234
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 835 ELNKILGGSFSKEMMLK-MLEINMFPHLGTDETFATLDFEGLFRSMPIPFTLLFSANFFR 893
E +I+GG+ +++ + + +I++ + A ++ G F+++P +
Sbjct: 30 EEARIVGGAVRNQLLEQPISDIDVATTCFPQQVIARVEEAG-FKAIPTGIAFGTVTVVAQ 88
Query: 894 NLA-RITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+ + +TTLR D+ TDGRHA+V F DW+ DA RRD T+N+++
Sbjct: 89 SCSYEVTTLRSDIETDGRHAKVAFDRDWQKDAERRDFTMNALY 131
>gi|390600428|gb|EIN09823.1| hypothetical protein PUNSTDRAFT_113174 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 389
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 17/124 (13%)
Query: 250 VILSDHESTSHWQQNDYKGFSPST-DWDTVD----FAKSPAIQELPVISAICLPVADAKL 304
+++S ES + +QQ DYK + + D +AK PA+Q P+ S I L
Sbjct: 232 IMVSRRESDNFYQQKDYKILPTAVRTHEQADKEGWWAKLPALQSNPINSVI-----GEVL 286
Query: 305 KLENHQMEVQGYAWSGG-GKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
+ E+ +EV GYA SG G + RV+V+ ++G+TW A T Q+ + W WTLWRA
Sbjct: 287 RREDGTLEVVGYAVSGAAGGQVKRVEVSANRGKTWGEAEITYQEGK------WSWTLWRA 340
Query: 364 TIPV 367
T+PV
Sbjct: 341 TVPV 344
Score = 39.3 bits (90), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 17/87 (19%)
Query: 431 FEVKPVKGLTWGHAAV----GNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVEIWSK 486
EV +G TWG A + G +WT R + G S ++ + +W K
Sbjct: 311 VEVSANRGKTWGEAEITYQEGKWSWTLWRATVPVAQEGASDEERV-----------VWCK 359
Query: 487 AVDSSYNTQPESFANIWNLRGVLSNAY 513
A D S TQ S WNLRGV NAY
Sbjct: 360 ATDESGITQAPSMD--WNLRGVGYNAY 384
>gi|189207122|ref|XP_001939895.1| sulfite oxidase, mitochondrial precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975988|gb|EDU42614.1| sulfite oxidase, mitochondrial precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 552
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 19/135 (14%)
Query: 256 ESTSHWQQNDYKGFSPSTD--------WDTVDFAKSPAIQELPVISAICLPVADAKLKL- 306
ES S++QQ+DYK P D W VD A+ ++PV S I +P +++ ++
Sbjct: 388 ESDSYYQQHDYKILPPEADCKEKAEEYWGKVD-----ALHDMPVNSVIAVPKSESTVRQE 442
Query: 307 ENHQMEVQGYAW-SGGGKAIVRVDVTIDQGRTWHVANF--TGQDSQAP-LTRHWGWTLWR 362
E+ +EV+GYA SG IV+V+V+ D G +W A T D A + W W LW+
Sbjct: 443 EDGTIEVKGYALPSGADGPIVKVEVSTDGGNSWADAELINTYDDEDAKDVELKWAWALWK 502
Query: 363 ATIPVDPKTKEVSIM 377
A + V+ K KE +++
Sbjct: 503 AKVKVE-KGKEATVV 516
>gi|334142201|ref|YP_004535408.1| poly(A) polymerase [Novosphingobium sp. PP1Y]
gi|333940232|emb|CCA93590.1| poly(A) polymerase [Novosphingobium sp. PP1Y]
Length = 390
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++D+F G DL++ F+GD RI+ED+LRILRYFRF AR + P + + E A
Sbjct: 132 GEIFDFFGGLHDLRQRTVRFIGDARQRIREDHLRILRYFRFQARFGSQPADRQAEEACAE 191
Query: 710 KNNLDGLHNISGERIWTELNKILG 733
L +S ERI E +LG
Sbjct: 192 LAAT--LKGLSRERIGMETMNLLG 213
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPFT-LLFSANFFRNL 895
+ +GG+ E++ L + +I+M L + A LD G+ R++P +A
Sbjct: 28 RFVGGAVRDELLDLPVKDIDMATTLLPQDVIARLDDAGI-RNVPTGIEHGTVTAVLPGGP 86
Query: 896 ARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGR A V F +W+ DA RRD T+N+++
Sbjct: 87 VEITTLRHDVSTDGRRATVAFASEWRDDAARRDFTINALY 126
>gi|335033868|ref|ZP_08527232.1| poly(A) polymerase [Agrobacterium sp. ATCC 31749]
gi|333794753|gb|EGL66086.1| poly(A) polymerase [Agrobacterium sp. ATCC 31749]
Length = 418
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D +G D++ F+GD RI EDYLRILR+FRFFA + + + L A
Sbjct: 133 GEIIDLVDGLADVETRTVRFIGDAAMRISEDYLRILRFFRFFAHYGSGRPDA--DGLRAS 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L +S ER+W+E K+L +L M +L
Sbjct: 191 ARAKDKLGTLSAERVWSETKKLLSARDPSRALLWMRQSGVL 231
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 17/118 (14%)
Query: 830 ERIWTELN------KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIP 882
+RI+ LN +I+GG+ +M L +++++M L D A G+ +++P
Sbjct: 16 KRIFALLNADGGEVRIVGGAVRNALMDLPVVDVDMATTLTPDVVVARAKAAGI-KTVPTG 74
Query: 883 F-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
TL+ F +TTLR DV T+GRHA+V F DW+ DA RRDLT+N+++
Sbjct: 75 IDHGTVTLVIDGEGFE----VTTLRRDVETNGRHAQVAFGTDWQTDAERRDLTINALY 128
>gi|326388402|ref|ZP_08209998.1| polynucleotide adenylyltransferase region [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207134|gb|EGD57955.1| polynucleotide adenylyltransferase region [Novosphingobium
nitrogenifigens DSM 19370]
Length = 395
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 4/172 (2%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+ DYF G DL F+GD +RI+EDYLRILRYFRF AR + P + + E A
Sbjct: 138 ISDYFGGQADLAAHRVRFIGDAETRIREDYLRILRYFRFHARFGSLPADAEAE--EACAR 195
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVELMKYK 771
GL +S ER+ EL ++LG + +M L + +++ E + L+ +
Sbjct: 196 LAPGLKGLSRERVGWELLRLLGHPDPAPTLRRM--AELGVLAQILPEADPEALPPLVAAE 253
Query: 772 EKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVLSAIKKNLDG 823
+ D + P + + Q AR+ + K +A + + G
Sbjct: 254 ACENVAPDSLRRLAAILPPDPPLAEQVAARLRLSTAQKKRLATAAARTSETG 305
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 836 LNKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPFTL---LFSANF 891
L + +GG+ ++ + + +I+M L +ET A L G+ IP L +A
Sbjct: 30 LCRWVGGAVRDTLVGIAVKDIDMATRLLPEETLARLKAAGI---KAIPTGLAHGTVTALT 86
Query: 892 FRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV TDGRHA V F+ DW+ DA RRD T+N+++
Sbjct: 87 AGGPVEITTLRRDVETDGRHATVAFSTDWREDAARRDFTINALY 130
>gi|150397472|ref|YP_001327939.1| polynucleotide adenylyltransferase [Sinorhizobium medicae WSM419]
gi|150028987|gb|ABR61104.1| Polynucleotide adenylyltransferase region [Sinorhizobium medicae
WSM419]
Length = 419
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G V D+ G +D+ F+G R+ EDYLRILR+FRFFA + + E L A
Sbjct: 132 EGEVLDHVGGLDDIATRTVRFIGSAAERVAEDYLRILRFFRFFAHYGSGRPD--AEGLKA 189
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
L +S ER+WTE K+L +L M +L
Sbjct: 190 CAQARTKLATLSAERVWTETKKLLSAVDPGRALLWMRQAGVL 231
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR DV TDGR AEV F DWK DA RRD T+N+++
Sbjct: 91 VTTLRRDVATDGRRAEVAFGADWKADAQRRDFTINALY 128
>gi|451942275|ref|YP_007462912.1| poly(A) polymerase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451901662|gb|AGF76124.1| poly(A) polymerase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 416
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D+ F+G +RI+EDYLRILR+FRFFA P+ + +
Sbjct: 136 GRLYDDVGGLNDIASRTVRFIGIAENRIREDYLRILRFFRFFAWYGVGRPDVQGLKACVS 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K +GL +S ERIW E+ K+L S +L M +L
Sbjct: 196 LK---EGLQKLSSERIWAEMKKLLAASDPTRALLWMRQSRIL 234
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F DW+ DA RRD T+N+++
Sbjct: 94 VTTLRSDIETDGRHAKVAFGRDWQKDAERRDFTINALY 131
>gi|240137896|ref|YP_002962368.1| molybdopterin oxidoreductase [Methylobacterium extorquens AM1]
gi|240007865|gb|ACS39091.1| Putative molybdopterin oxidoreductase [Methylobacterium extorquens
AM1]
Length = 361
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
++ + D S + Q +DYK F P+ T D A I+ +P+ SAIC P A LK
Sbjct: 205 ARISVQDRPSDNPMQADDYKLFPPNVTAGTADPAHGMTIEAMPLNSAICEPARGAALKAG 264
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLW 361
H ++GYA + +A+ RVDV+ D GR+W A +D+ AP + WT W
Sbjct: 265 RHA--IRGYAIA-SDRAVARVDVSTDGGRSWAQARIE-RDADAP----YAWTFW 310
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHV 481
CA + V PV G W A+GNA WTG RL DVL+ AGI D+ D +HV
Sbjct: 89 CAGNRRADMLAVAPVSGDPWAPGAIGNAEWTGVRLADVLREAGI------DADDERHVAF 142
Query: 482 EIWSKAVDS 490
E + D+
Sbjct: 143 ESHDRIADT 151
>gi|89052572|ref|YP_508023.1| polynucleotide adenylyltransferase [Jannaschia sp. CCS1]
gi|88862121|gb|ABD52998.1| Polynucleotide adenylyltransferase protein [Jannaschia sp. CCS1]
Length = 379
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 25/196 (12%)
Query: 558 NPHSVRFKSGP--DGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAG--EGTVTA-- 611
+ H V F G +G + LD + C +R+ + E G + G GTVT
Sbjct: 21 DGHGVWFVGGCVRNGLLGLDVADIDICTNLRPERVMALAEAAGLKAVPTGIDHGTVTVVS 80
Query: 612 -----KVLSYRNRREKEDR---------IGENQPFRKLTLSVQDKDRSFRLDGTVYD-YF 656
++ + R E + R + E+ R T++ R G V D
Sbjct: 81 GGLPYEITTLRRDVETDGRHASVAFTDVLAEDAARRDFTMNALYATRG----GEVLDPNG 136
Query: 657 NGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGL 716
+G DL F+GD +RI EDYLRILR+FRF A + E L+A LDG+
Sbjct: 137 DGLSDLHARRVRFIGDADARIAEDYLRILRFFRFHAWYADPSGGLDAESLAACAAGLDGI 196
Query: 717 HNISGERIWTELNKIL 732
+S ER+ E+ +L
Sbjct: 197 AQLSRERVGAEIKTLL 212
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV TDGRHA V FT+ DA RRD T+N+++
Sbjct: 87 ITTLRRDVETDGRHASVAFTDVLAEDAARRDFTMNALY 124
>gi|94498681|ref|ZP_01305232.1| Polynucleotide adenylyltransferase region [Sphingomonas sp. SKA58]
gi|94421844|gb|EAT06894.1| Polynucleotide adenylyltransferase region [Sphingomonas sp. SKA58]
Length = 403
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
L G + DYF G DL+ F+G+ +RI ED+LRILRYFRF AR +N ++
Sbjct: 133 LTGAISDYFGGIADLEARRLRFIGEADARIAEDHLRILRYFRFLARYGDNDVDNSAYAAC 192
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMR--EYIV 765
N L +S ERI EL K++ + + L+++ + +L L M + +
Sbjct: 193 VAAAN--SLMALSRERIADELLKLMAVAAPGQ-ALRLMIEGGILRPVLPEVAMDGVDRVE 249
Query: 766 ELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVLS 815
L++ + ++ L + P + + Q AR+ + K VL+
Sbjct: 250 ALIEREAQAALPPSPVRRLAALLPPDAAVADQVGARLKLSNKARKRLVLA 299
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGR A + +T+DW+ DA RRD T+N+++
Sbjct: 92 ITTLRRDVSTDGRRATIAYTDDWREDAARRDFTINALY 129
>gi|405382048|ref|ZP_11035870.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium sp.
CF142]
gi|397321536|gb|EJJ25952.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium sp.
CF142]
Length = 418
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D G +D++K F+G+ +RI EDYLRILR+FRFFA E L A
Sbjct: 133 GEVIDLVGGLDDIEKRNIRFIGNAATRIAEDYLRILRFFRFFA--WYGSGRPDAEGLRAS 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
L +S ER+W+EL K+L +L M
Sbjct: 191 SVARSKLKTLSAERVWSELRKLLSAEDPGRALLWM 225
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 837 NKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSAN 890
+++GG+ +M L + +I++ L + G+ +++P TL+
Sbjct: 29 GRVVGGAVRNSLMGLAVADIDIATTLLPEAVIERASAAGI-KAVPTGIDHGTVTLVIDGR 87
Query: 891 FFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
F +TTLR DV TDGR A+V F+ DW+ DA RRDLT+N+++
Sbjct: 88 PFE----VTTLRTDVETDGRRAKVAFSADWQSDAERRDLTINALY 128
>gi|154252684|ref|YP_001413508.1| polynucleotide adenylyltransferase [Parvibaculum lavamentivorans
DS-1]
gi|154156634|gb|ABS63851.1| Polynucleotide adenylyltransferase region [Parvibaculum
lavamentivorans DS-1]
Length = 417
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGT++D G DLK F+GD RI+EDYLRILR+FRF A E L A
Sbjct: 135 DGTIHDPLGGLADLKARRVRFIGDAHERIREDYLRILRFFRFHA--WYGKGEPDEAGLRA 192
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
+GL +SGER+ EL K +
Sbjct: 193 AAEEREGLRQLSGERVRDELFKTI 216
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR+DV TDGR A+V FTEDW DA RRD T+N+++
Sbjct: 94 ITTLRVDVKTDGRRADVAFTEDWTADAGRRDFTMNALY 131
>gi|398378233|ref|ZP_10536399.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium sp. AP16]
gi|397725446|gb|EJK85897.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium sp. AP16]
Length = 418
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
+G V D G DL++ F+GD +RI ED+LRILR+FRFFA P+ +
Sbjct: 132 NGEVIDMVGGLADLERRNIRFIGDAATRIAEDHLRILRFFRFFAYYGSGRPDADGLRACA 191
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A ++ + ++S ER+W+E+ K+L +L M +L
Sbjct: 192 AARSK---IASLSAERVWSEMKKLLAAKDPGRALLWMRQVGIL 231
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV TDGR A+V F+ DW+ DA RRDLT+N+++
Sbjct: 91 ITTLRRDVETDGRRAQVAFSNDWEADAERRDLTINALY 128
>gi|253771292|ref|YP_003034142.1| poly A polymerase family protein [Clostridium botulinum D str.
1873]
gi|253721444|gb|ACT33736.1| poly A polymerase family protein [Clostridium botulinum D str.
1873]
Length = 470
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 590 LAGIFEKHGYQLRIAG--EGTVTA-------KVLSYRNRREKEDRIGENQPFRKLTLSVQ 640
+ IF+ GY + G GTVT +V +YR E ED N+ L
Sbjct: 83 VINIFKNLGYTILPTGLKHGTVTIVINNEHYEVTTYRIDGEYEDNRHPNEVEFTRNLKED 142
Query: 641 DKDRSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFAR 693
R F ++ Y DYFN DL + VGDPV R ED LRILR +RF A+
Sbjct: 143 LNRRDFTINSMAYNHKDGLIDYFNSKNDLDSRIIKCVGDPVKRFSEDALRILRAYRFAAQ 202
Query: 694 ICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
+ N + L+A + L NIS ERI E+NKIL
Sbjct: 203 LDFKIEN---KTLNATRQLKGNLKNISIERIRDEINKIL 238
>gi|117188435|gb|ABK32632.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 130
Score = 67.4 bits (163), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 288 ELPVISAICLPVADAKLKLENH---QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFT 344
EL + SA+ P D L + + EV GYA++GGG+AI RV+V+ DQGR WH+A
Sbjct: 13 ELNINSAMAKPNHDETLNIAQNIHKTYEVAGYAYTGGGRAITRVEVSTDQGRHWHLAKLN 72
Query: 345 GQDSQAPLTRHWGWTLWRATIPV 367
Q+ +W W W +PV
Sbjct: 73 RQERPTEYGMYWCWIWWAYDLPV 95
>gi|319403812|emb|CBI77396.1| poly(A) polymerase [Bartonella rochalimae ATCC BAA-1498]
Length = 417
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D+ F+G RI EDYLRILR+FRFFA P+ + +
Sbjct: 136 GEIYDEVGGLNDIATRTVRFIGVAEQRICEDYLRILRFFRFFAWYGIGRPDAEGLKACTR 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLF 752
+K+ GLH +S ERIW E+ K+L +L M +L F
Sbjct: 196 LKH---GLHKLSPERIWGEMKKLLTALDPTRALLWMRQSGILTF 236
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHAEV F+ DWK DA RRD T+N+++
Sbjct: 94 VTTLRSDIQTDGRHAEVVFSRDWKKDAERRDFTINALY 131
>gi|222086618|ref|YP_002545152.1| poly(A) polymerase [Agrobacterium radiobacter K84]
gi|221724066|gb|ACM27222.1| poly(A) polymerase protein [Agrobacterium radiobacter K84]
Length = 418
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
+G V D G DL++ F+GD +RI ED+LRILR+FRFFA P+ +
Sbjct: 132 NGEVIDMVGGLADLERRNIRFIGDAATRIAEDHLRILRFFRFFAYYGSGRPDADGLRACA 191
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A ++ + ++S ER+W+E+ K+L +L M +L
Sbjct: 192 AARSK---IASLSAERVWSEMKKLLAAKDPGRALLWMRQVGIL 231
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV TDGR A+V F+ DW+ DA RRDLT+N+++
Sbjct: 91 ITTLRRDVETDGRRAQVAFSNDWQADAERRDLTINALY 128
>gi|313887921|ref|ZP_07821600.1| putative tRNA adenylyltransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846087|gb|EFR33469.1| putative tRNA adenylyltransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 440
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG +YD FNG +D+K + VGDP RI+ED LR++R RF R +EE+ A
Sbjct: 122 DGNLYDPFNGQDDIKNKIIRAVGDPNERIREDALRMMRAIRFAGRF---RFFIEEELFDA 178
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL--LFSKLKATT 759
I N L I+ ERI+ E +K++ G +L M +L +F +LK T
Sbjct: 179 ISLNASLLKKIAPERIFDEFSKMITGESPSHYLLLMEETGMLDVIFPELKRTV 231
>gi|426401433|ref|YP_007020405.1| poly A polymerase head domain-containing protein [Candidatus
Endolissoclinum patella L2]
gi|425858101|gb|AFX99137.1| poly A polymerase head domain protein [Candidatus Endolissoclinum
patella L2]
Length = 409
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYD-YFNGHEDLKKGVCAFVGDPVSRIQEDYLRILR 686
E+ R TL+ D ++G +YD G D++ F+GDP RI ED LRILR
Sbjct: 118 EDASRRDFTLNAVYLD----MEGNLYDPTATGIADIRARRIRFIGDPRMRIHEDCLRILR 173
Query: 687 YFRFFARICNNPNNHKEEVLSAIKNNLD---GLHNISGERIWTELNKILGGSFSKEMMLK 743
+FRF+A HKE + ++K +D L +SGERIW E +++L + ++++
Sbjct: 174 FFRFYAEY-----GHKEPDIDSLKACVDLAPSLSGLSGERIWKEFSRLLIAPMAAKVIVI 228
Query: 744 M 744
M
Sbjct: 229 M 229
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
+TTLR D+ TDGRHA V FTEDW DA+RRD T+N+++L M+
Sbjct: 94 VTTLRRDMDTDGRHAVVSFTEDWLEDASRRDFTLNAVYLDME 135
>gi|359770103|gb|AEV66150.1| nitrate reductase [Nicotiana tabacum]
Length = 904
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 305 RIIVTTQESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEI 364
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GY++SGGGK + RV+VT+D G TW V + ++W W
Sbjct: 365 LPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTLDGGETWQVCTLDHPEKPTKYGKYWCWC 424
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
LW + EV ++D+L K+
Sbjct: 425 LW---------SLEVEVLDLLSAKE 440
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 534 YSMSEVRKHSSADSA-WIIVHGHIYDATRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 589
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 590 -SDKAKKLLEDFRIGEL 605
>gi|414170341|ref|ZP_11425955.1| hypothetical protein HMPREF9696_03810 [Afipia clevelandensis ATCC
49720]
gi|410885013|gb|EKS32833.1| hypothetical protein HMPREF9696_03810 [Afipia clevelandensis ATCC
49720]
Length = 417
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V+D G D++ F+GDP RI EDYLRILR+FR A A
Sbjct: 134 DGVVHDEVGGLADIEARRVRFIGDPARRIAEDYLRILRFFRIHA--AYGEGTPDRAGYKA 191
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL 751
DGL +S ERI E+ K++ + E ++ M LLL
Sbjct: 192 CIAGRDGLAGLSAERIRMEMLKLMVAKRAAEALVAMDDAGLLL 234
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T GR A V F DW+ DA RRD T+N +F+
Sbjct: 93 VTTLREDIETFGRKATVAFGRDWRRDAMRRDFTMNGLFV 131
>gi|384221031|ref|YP_005612197.1| poly(A) polymerase [Bradyrhizobium japonicum USDA 6]
gi|354959930|dbj|BAL12609.1| poly(A) polymerase [Bradyrhizobium japonicum USDA 6]
Length = 418
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G VYDY G D F+GDP RI EDYLRILR+FR A P+ ++ L+
Sbjct: 136 GVVYDYVGGIADAAARRVRFIGDPDQRIAEDYLRILRFFRIHAAFGAGEPD--RDGYLAC 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
I+ GL ++S ER+ E+ K+L + + L M LL
Sbjct: 194 IRGRA-GLASLSAERVRMEMLKLLVAHGASDAALAMADGGLL 234
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR D T GR A V F DW DA RRD T+N +
Sbjct: 94 VTTLREDTETFGRKARVAFGRDWVKDAERRDFTMNGL 130
>gi|299134641|ref|ZP_07027833.1| Polynucleotide adenylyltransferase region [Afipia sp. 1NLS2]
gi|298590451|gb|EFI50654.1| Polynucleotide adenylyltransferase region [Afipia sp. 1NLS2]
Length = 422
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN-PNNHKE 703
S DG V+D+ G D++ F+GDP RI ED+LRILR+FR A P+
Sbjct: 135 SLSADGIVHDHVGGLADIEARRVRFIGDPARRISEDFLRILRFFRIHAAYGQGEPDRAAM 194
Query: 704 EVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
E A + DGL ++S ER+ E+ K++ + + +++M LL
Sbjct: 195 EACIAAR---DGLASLSAERLRMEMLKLVVAKGAADALIEMEDGGLL 238
Score = 46.6 bits (109), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T GR A+V F DW DA RRD T+N + L
Sbjct: 98 VTTLREDIETFGRKAKVAFGRDWVRDAERRDFTINGLSL 136
>gi|319406819|emb|CBI80452.1| poly(A) polymerase [Bartonella sp. 1-1C]
Length = 417
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D+ F+G RI EDYLRILR+FRFFA P+ + +
Sbjct: 136 GEIYDEVGGLNDIATRTVRFIGVAEQRICEDYLRILRFFRFFAWYGIGRPDAEGLKACTH 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLF 752
+K+ GLH +S ERIW E+ K+L +L M +L F
Sbjct: 196 LKH---GLHKLSPERIWGEMKKLLTALDPTRALLWMRQSGILTF 236
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHAEV F+ DWK DA RRD T+N+++
Sbjct: 94 VTTLRSDIQTDGRHAEVVFSRDWKKDAERRDFTINALY 131
>gi|209886120|ref|YP_002289977.1| polynucleotide adenylyltransferase [Oligotropha carboxidovorans
OM5]
gi|337740319|ref|YP_004632047.1| tRNA-nucleotidyltransferase, poly(A) polymerase family [Oligotropha
carboxidovorans OM5]
gi|386029336|ref|YP_005950111.1| tRNA-nucleotidyltransferase [Oligotropha carboxidovorans OM4]
gi|209874316|gb|ACI94112.1| polynucleotide adenylyltransferase region [Oligotropha
carboxidovorans OM5]
gi|336094404|gb|AEI02230.1| tRNA-nucleotidyltransferase, poly(A) polymerase family [Oligotropha
carboxidovorans OM4]
gi|336097983|gb|AEI05806.1| tRNA-nucleotidyltransferase, poly(A) polymerase family [Oligotropha
carboxidovorans OM5]
Length = 422
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC-NNPNNHKE 703
S DGTV+DY G D+ F+GDP RI ED+LRILR+FR A P+
Sbjct: 135 SLSTDGTVHDYVGGLPDIAARRVRFIGDPARRIGEDFLRILRFFRIHAAYGEGEPDQAAR 194
Query: 704 EVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ A + DGL +S ER+ E+ K++ + + ++ M LL
Sbjct: 195 DACIAAR---DGLDLLSAERLRMEMLKLVVARGAADALVAMDDAGLL 238
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR D+ T GR A+V F DW DA RRD T+N + L
Sbjct: 98 VTTLREDIETFGRKAKVAFGRDWARDAERRDFTINGLSL 136
>gi|356552839|ref|XP_003544770.1| PREDICTED: nitrate reductase [NADH] 2-like [Glycine max]
Length = 886
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++++S+HES S++ D + D + D + I EL + S I P
Sbjct: 284 RIVVSEHESESYYHYKDNRVLPSQVDSEHADAEGWWYKPEYIINELNINSVITTPCHQEI 343
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA++GGG+ + RV+VT+D G+TW + + ++W W
Sbjct: 344 LPINSWTTQRPYLLRGYAYTGGGRKLTRVEVTLDVGKTWRLCKLDRTEKPNKYGKYWCWC 403
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV +MD+L K+
Sbjct: 404 FW---------SLEVEVMDLLGTKE 419
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++S+++ H S W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 513 FTISEVKKHCT-SDSTWIIIHGHVYDCTRFLKDHPGGVDSILINAGTDCTEEFDAIH--- 568
Query: 81 LQDEVFELLESYRIGNI 97
++ ++LE +RIG +
Sbjct: 569 -SEKAKKMLEDFRIGEL 584
>gi|399036799|ref|ZP_10733763.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium sp.
CF122]
gi|398065626|gb|EJL57247.1| tRNA nucleotidyltransferase/poly(A) polymerase [Rhizobium sp.
CF122]
Length = 417
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D G D++K F+GD +R+ EDYLRILR+FRFFA + + + L A
Sbjct: 133 GDVIDLVGGLADIEKRNIRFIGDAATRVAEDYLRILRFFRFFAYYGSGRPDA--DGLRAC 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ L +S ER+W+EL K+L +L M +L
Sbjct: 191 VSARAKLKTLSAERLWSELRKLLSAEDPGRALLWMRQVGVL 231
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
+TTLR DV TDGR A+V F+ DW+ DA RRDLT+N++++ K
Sbjct: 91 VTTLRADVETDGRRAKVAFSSDWQTDAERRDLTINALYVDSK 132
>gi|357461659|ref|XP_003601111.1| Nitrate reductase [Medicago truncatula]
gi|355490159|gb|AES71362.1| Nitrate reductase [Medicago truncatula]
Length = 876
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES SH+ +D + D + + + I EL + S I P
Sbjct: 285 RIIVTTKESDSHYHYHDNRVLPSQVDAELANKEAWFYKPEYIINELNINSVITTPCHGEI 344
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGG+ + RV+VT+D G TW V Q+ + ++W W
Sbjct: 345 LIVNSDTTLMPYLLKGYAYSGGGRKVTRVEVTMDGGETWQVCKLEHQEKPSKYGKYWCWC 404
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D K+ D A N P+ +
Sbjct: 405 FW---------SLEVEVLDFFGAKEIAVRAWDLANNTQPENL 437
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
Y++ +++ H + S W++ VYD T +++ HPGG I++ A E F A++
Sbjct: 519 YTMFEVKKHNN-SDSAWIIVNGHVYDCTHYLKDHPGGVDSILINAGTDCTEEFEAIH--- 574
Query: 81 LQDEVFELLESYRIGNISQEDSK 103
D+ ++L+ Y IG + D+K
Sbjct: 575 -SDKAKKMLDDYLIGELLTTDTK 596
>gi|284447990|gb|ADB89065.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 131
Score = 67.0 bits (162), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 286 IQELPVISAICLP--VADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I EL + SA+ P + KL ++GY +SGGG+ ++RV+V+ID G+TW ++
Sbjct: 11 INELSINSAVAYPGHLEVVKLDKPAKTYTIKGYCYSGGGRKVIRVEVSIDNGKTWTLSKL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDI----DFATNATPDQM 399
T + R+W W W +P+ D+ G+ P + D A N P+++
Sbjct: 71 THPEKPTEYGRYWCWCFWELEVPLS---------DLYTGEAPEILCRGWDAAMNRQPEKL 121
>gi|27377580|ref|NP_769109.1| poly(A) polymerase [Bradyrhizobium japonicum USDA 110]
gi|27350724|dbj|BAC47734.1| poly(A) polymerase [Bradyrhizobium japonicum USDA 110]
Length = 418
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G VYD+ G D + F+GDP RI EDYLRILR+FR A P+ ++ L+
Sbjct: 136 GVVYDHVGGIADARARRVRFIGDPDQRIAEDYLRILRFFRIHAAFGAGEPD--RDGYLAC 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
I+ GL ++S ER+ E+ K+L + +L M LL
Sbjct: 194 IRGRA-GLASLSAERVRMEMLKLLVAGGASAAVLAMAEGGLL 234
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR D T GR A+V F DW DA RRD T+N +
Sbjct: 94 VTTLREDTETFGRKAKVAFGRDWVKDAERRDFTMNGL 130
>gi|288958320|ref|YP_003448661.1| poly(A) polymerase [Azospirillum sp. B510]
gi|288910628|dbj|BAI72117.1| poly(A) polymerase [Azospirillum sp. B510]
Length = 430
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R LT++ S DG ++D F G DL G FVG+ RI ED LR+LR+
Sbjct: 129 EDAARRDLTMNAM----SCTPDGDLFDPFGGLADLAAGRVRFVGEARRRIAEDVLRLLRF 184
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF A + E L+A ++ L +SGER+ EL ++L + + M+ Q
Sbjct: 185 FRFHAHYGR--GDPDAEALAACRDLAPRLPTLSGERVRGELLRLLTAPCAAAVWRLMMGQ 242
Query: 748 NLLL 751
+++
Sbjct: 243 GIMV 246
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV + GRHA V+FT+DW DA RRDLT+N+M
Sbjct: 105 ITTLRRDVESFGRHARVEFTDDWIEDAARRDLTMNAM 141
>gi|170751638|ref|YP_001757898.1| sulfite oxidase [Methylobacterium radiotolerans JCM 2831]
gi|170658160|gb|ACB27215.1| Sulfite oxidase [Methylobacterium radiotolerans JCM 2831]
Length = 361
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
++ + D S + Q +DYK F P +T + A I+ +P+ SAIC P A LK
Sbjct: 205 ARITVQDRPSDNPMQADDYKLFPPDVTAETAEPAHGITIEAMPLNSAICEPARGAALKAG 264
Query: 308 NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLW 361
H ++GYA + +A+ RVDV+ D GR+W A +D+ AP + WT W
Sbjct: 265 RHA--IRGYAIA-SDRAVARVDVSTDGGRSWAQARIE-RDADAP----YAWTFW 310
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 399 MKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVD 458
+KA FA V + CA + V PV G W A+GNA WTG RL D
Sbjct: 74 LKARFAPVTVTAVMQ--------CAGNRRADMLAVAPVSGDPWAPGAIGNAEWTGVRLAD 125
Query: 459 VLKAAGISPDQSLDSADVQHVHVEIWSKAVDS 490
VL AAGI D+ D +HV E + D+
Sbjct: 126 VLCAAGI------DADDGRHVAFESHDRIADT 151
>gi|117188407|gb|ABK32618.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 67.0 bits (162), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 288 ELPVISAICLPVADAKLKLENH---QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFT 344
EL + SA+ P D L + + EV GYA++GGG+AI RV+V+ DQGR WH+A
Sbjct: 12 ELNINSAMAKPNHDETLNVAQNIHKTYEVAGYAYTGGGRAITRVEVSTDQGRHWHLAKLN 71
Query: 345 GQDSQAPLTRHWGWTLWRATIPV 367
Q+ +W W W +PV
Sbjct: 72 RQERPTEYGMYWCWIWWAYDLPV 94
>gi|402312739|ref|ZP_10831663.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Lachnospiraceae bacterium ICM7]
gi|400369197|gb|EJP22200.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Lachnospiraceae bacterium ICM7]
Length = 401
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D + G EDL G+ VGDP R ED LR+LR RF A++
Sbjct: 112 RDFTINAMAYSHKKGIVDLYKGQEDLSSGIIRAVGDPNKRFDEDALRMLRAIRFSAQLGF 171
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEM 740
+++ AIK+ L N+S ERI+ ELNK L G+F++ +
Sbjct: 172 EI---EKDTFVAIKDKASLLSNVSKERIFVELNKTLSGNFAENV 212
>gi|395783961|ref|ZP_10463809.1| hypothetical protein ME3_00465 [Bartonella melophagi K-2C]
gi|395425229|gb|EJF91399.1| hypothetical protein ME3_00465 [Bartonella melophagi K-2C]
Length = 417
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 595 EKHGYQLRIAGE--GTVTA-------KVLSYRNRREKEDRIGENQPFRKLTLSVQDKDRS 645
EK G++ G GTVT +V + R+ E + R + R Q +D +
Sbjct: 67 EKEGFKAIPTGVDFGTVTVFIESCCYEVTTLRSDIETDGRYAKVAFCRDWKKDAQRRDFT 126
Query: 646 FRL-----DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN-PN 699
G +YD G D++ F+G RI EDYLRILR+FRFFA P+
Sbjct: 127 INALYCDASGQLYDEVGGLNDIESKTIRFIGVAKDRICEDYLRILRFFRFFAWYGGGRPD 186
Query: 700 NHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ ++K GLH +S ERIW E+ K+L S +L M +L
Sbjct: 187 AQGLKACISLKQ---GLHKLSPERIWGEMKKLLTASDPTRALLWMRQSGIL 234
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 795 IRQFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLKML- 853
I Q F ++ +NH + +L + +LDG E +I+GG+ +++ + +
Sbjct: 3 IPQNFRKVDWLQHNHIQTLLRIL--SLDG-----------EEARIVGGAVRNQLLNQPIS 49
Query: 854 EINMFPHLGTDETFATLDFEGLFRSMPIPFTLLFSANFFRNLA-RITTLRIDVTTDGRHA 912
+I++ + ++ EG F+++P F + +TTLR D+ TDGR+A
Sbjct: 50 DIDIATTCLPQQVIKRVEKEG-FKAIPTGVDFGTVTVFIESCCYEVTTLRSDIETDGRYA 108
Query: 913 EVQFTEDWKLDANRRDLTVNSMF 935
+V F DWK DA RRD T+N+++
Sbjct: 109 KVAFCRDWKKDAQRRDFTINALY 131
>gi|404483059|ref|ZP_11018284.1| hypothetical protein HMPREF1135_01344 [Clostridiales bacterium
OBRC5-5]
gi|404344149|gb|EJZ70508.1| hypothetical protein HMPREF1135_01344 [Clostridiales bacterium
OBRC5-5]
Length = 456
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D + G EDL G+ VGDP R ED LR+LR RF A++
Sbjct: 167 RDFTINAMAYSHKKGIVDLYKGQEDLNSGIIRAVGDPNKRFDEDALRMLRAIRFSAQLGF 226
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEM 740
+++ AIK+ L N+S ERI+ ELNK L G+F++ +
Sbjct: 227 EI---EKDTFVAIKDKASLLSNVSKERIFVELNKTLSGNFAENV 267
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEV 433
+ D L+ +KP D D TNA P++MK +F +TF+ G HGT+ M D E +E+
Sbjct: 84 CVRDSLLCRKPKDWDITTNALPEEMKRIFK----KTFD-TGIAHGTITVLM-DGEGYEL 136
>gi|159185123|ref|NP_355207.2| poly(A) polymerase [Agrobacterium fabrum str. C58]
gi|159140394|gb|AAK87992.2| poly(A) polymerase [Agrobacterium fabrum str. C58]
Length = 418
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D +G D++ F+GD RI EDYLRILR+FRFFA + + + L A
Sbjct: 133 GEIIDLVDGLADVETRTVRFIGDAAMRISEDYLRILRFFRFFAHYGSGRPDA--DGLRAS 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L +S ER+W+E K++ +L M +L
Sbjct: 191 ARAKDKLGTLSAERVWSETKKLISARDPSRALLWMRQSGVL 231
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 17/118 (14%)
Query: 830 ERIWTELN------KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIP 882
+RI+ LN +I+GG+ +M L +++++M + + G+ +S+P
Sbjct: 16 KRIFALLNADGGEVRIVGGAVRNALMDLPVVDVDMATTVTPNVVVERAKAAGI-KSVPTG 74
Query: 883 F-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
TL+ F +TTLR DV T+GRHA+V F DW+ DA RRDLT+N+++
Sbjct: 75 IEHGTVTLVIDGEGFE----VTTLRRDVETNGRHAQVAFGTDWQTDAERRDLTINALY 128
>gi|373468334|ref|ZP_09559591.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Lachnospiraceae bacterium oral taxon 082 str. F0431]
gi|371766425|gb|EHO54680.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Lachnospiraceae bacterium oral taxon 082 str. F0431]
Length = 402
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D F+G +DL+ G+ VGD R ED LR+LR RF A++
Sbjct: 112 RDFTINAMAYSHKKGIVDLFDGRKDLQNGIIRAVGDAKKRFDEDALRMLRAVRFAAQLGF 171
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
+ ++ AIK L N+S ERI+ ELNK L G F++ +KM+Y
Sbjct: 172 KID---DDTFEAIKEKAKLLSNVSKERIFVELNKSLNGEFAQN--IKMVY 216
>gi|390165856|ref|ZP_10218131.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Sphingobium
indicum B90A]
gi|389591274|gb|EIM69247.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Sphingobium
indicum B90A]
Length = 402
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 651 TVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIK 710
+ D+F G DL+ F+GD +RI ED+LRILRYFRF AR ++ + +E +A +
Sbjct: 136 AITDFFGGVADLRAHRVRFIGDAGARIAEDHLRILRYFRFLARFGHDEPD--DEAYAACR 193
Query: 711 NNLDGLHNISGERIWTELNKIL 732
+ L +S ERI EL K+L
Sbjct: 194 QAANSLMALSRERIADELLKLL 215
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGR A + +T+DW+ DA RRD T+N+++
Sbjct: 92 ITTLRRDVSTDGRRATIAYTDDWREDAARRDFTINALY 129
>gi|128195|sp|P17570.1|NIA_SOLLC RecName: Full=Nitrate reductase [NADH]; Short=NR
gi|19283|emb|CAA32218.1| nitrate reductase [Solanum lycopersicum]
Length = 911
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 310 RIVVTTQESESYYHYKDNRVLPPHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEI 369
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GYA+SGGGK + RV+VT+D G TW V + ++W W
Sbjct: 370 LPINAWTTQRPYTLRGYAYSGGGKKVTRVEVTLDGGETWSVCTLDHPEKPTKYGKYWCWC 429
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 430 FW---------SLEVEVLDLLSAKE 445
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S W++ +YD + F++ HPGG I++ A E F A++
Sbjct: 539 YSMSEVRKHNS-SDSAWIIVHGHIYDASRFLKDHPGGVDSILINAGTDCTEEFDAIH--- 594
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 595 -SDKAKKLLEDFRIGEL 610
>gi|294675746|ref|YP_003576361.1| CCA-adding enzyme [Rhodobacter capsulatus SB 1003]
gi|294474566|gb|ADE83954.1| CCA-adding enzyme [Rhodobacter capsulatus SB 1003]
Length = 384
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 647 RLDGTVYDYFN-GHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEV 705
R DGTV D G DL FVGDP RI EDYLRILR+FRF A + E
Sbjct: 128 RADGTVIDPLGEGLADLSARRLRFVGDPAQRITEDYLRILRFFRFTAWYGDPDQGMDAEG 187
Query: 706 LSAIKNNLDGLHNISGERIWTELNKIL 732
L+A G+ +S ERI E+ K+L
Sbjct: 188 LAACAAFSAGIETLSRERIGHEMRKLL 214
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV T GRHA V F+ D + DA RRD T+N+++
Sbjct: 89 VTTFRRDVETFGRHAIVAFSTDLREDAARRDFTMNALY 126
>gi|452819799|gb|EME26851.1| sulfite oxidase [Galdieria sulphuraria]
Length = 399
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++I S + DYK S D+ VD++ +P I L V AIC P+ D KL
Sbjct: 228 RIICKMDSSEGFFMTKDYKYLPSSMDFGNVDWSSTPPIMNLSVQCAICDPLPDTKLSQGP 287
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQA---------PLTRHWGWT 359
++ V+GYA +G G I+RV+++++ + W A + A + W W
Sbjct: 288 YK--VRGYALTGKGDHIMRVELSVNGSKDWQEAKLIKGEKIANREIPKRITAGLKDWSWV 345
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPD 397
LW + + P ++M + ID A N P+
Sbjct: 346 LWELVVDIKPPM-------VIMARA---IDSACNTQPE 373
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 28/118 (23%)
Query: 385 PHDIDFATNATPDQMKAMFAEEKVRTFNE----------------KGEKHGTV----CAR 424
P+D+ F N P + + +EE+ R E K KH CA
Sbjct: 52 PNDLFFVRNHAP--VPVLRSEEEFRLRVEGIVAYPLLLSLQDLKTKFRKHTVTAVLQCAG 109
Query: 425 MNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVE 482
E +KP++G+ W H A GNA W+GA L DVL AAG+ P+++ +HV E
Sbjct: 110 NRRTEMSRIKPIQGVPWLHGAAGNAVWSGALLKDVLMAAGVYPNKA------EHVEFE 161
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 29/36 (80%), Gaps = 2/36 (5%)
Query: 483 IWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRV 518
I ++A+DS+ NTQPE +WNLRGV++N++H+V +
Sbjct: 359 IMARAIDSACNTQPE--VPLWNLRGVMNNSWHKVNI 392
>gi|335040529|ref|ZP_08533656.1| CCA-adding enzyme [Caldalkalibacillus thermarum TA2.A1]
gi|334179609|gb|EGL82247.1| CCA-adding enzyme [Caldalkalibacillus thermarum TA2.A1]
Length = 402
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
D + ++ R T++ DR G +YDYF+G DLK+ V VG+P R +ED LR
Sbjct: 101 DSLRQDLSRRDFTINAMAMDRF----GRIYDYFDGQRDLKRKVIRTVGEPEDRFEEDALR 156
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSF 736
+ R RF ++ + + EVL+AI+N L ++ ERI E K++ F
Sbjct: 157 MFRAVRFSGQLGFSV---EPEVLNAIQNQRQLLEKVARERITQEFQKLMQAPF 206
>gi|402823183|ref|ZP_10872620.1| poly(A) polymerase [Sphingomonas sp. LH128]
gi|402263246|gb|EJU13172.1| poly(A) polymerase [Sphingomonas sp. LH128]
Length = 391
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNP-NNHKEEVLSA 708
G ++D+F+G DL F+GD RI+ED+LRILRYFRF AR ++P + E S
Sbjct: 132 GEIHDWFDGLADLSARHVRFIGDARQRIREDHLRILRYFRFQARFGSSPADTEAEAACSE 191
Query: 709 IKNNLDGLHNISGERIWTELNKILG 733
+ L GL S ER+ E +LG
Sbjct: 192 LAATLKGL---SRERVGMETMNLLG 213
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 803 CNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMM-LKMLEINMFPHL 861
N P H+E++L + +G + +GG+ ++ L + +I+M L
Sbjct: 5 LNAPWMHREDLLGLVAALGEGN------------ARYVGGAVRDTLLDLPVKDIDMATVL 52
Query: 862 GTDETFATLDFEGLFRSMPIPFTL-LFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDW 920
+ LD G+ R++P +A ITTLR DV+TDGR A V F EDW
Sbjct: 53 LPEAVIERLDAAGI-RNVPTGIEHGTVTAVLPHGPVEITTLRHDVSTDGRRATVAFAEDW 111
Query: 921 KLDANRRDLTVNSMF 935
+ DA RRD T+N+++
Sbjct: 112 REDAARRDFTINALY 126
>gi|381336344|ref|YP_005174119.1| tRNA nucleotidyltransferase/poly(A) polymerase [Leuconostoc
mesenteroides subsp. mesenteroides J18]
gi|356644310|gb|AET30153.1| tRNA nucleotidyltransferase/poly(A) polymerase [Leuconostoc
mesenteroides subsp. mesenteroides J18]
Length = 401
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
+ R DG + D FNG ED+KKGV VGD R ED LR++R RF A++ N ++
Sbjct: 124 AMRHDGEILDLFNGLEDMKKGVIRAVGDAEKRFTEDALRMMRALRFSAQLGFNIEADTQK 183
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGG---SFSKEMMLKMLYQNLL 750
L + N L I+ ERI E K+L G S S EM L+ N L
Sbjct: 184 ALVDLAPN---LAKIAVERIRVEFEKLLLGSQASQSLEMALRDHVMNYL 229
>gi|398823591|ref|ZP_10581950.1| tRNA nucleotidyltransferase/poly(A) polymerase [Bradyrhizobium sp.
YR681]
gi|398225800|gb|EJN12063.1| tRNA nucleotidyltransferase/poly(A) polymerase [Bradyrhizobium sp.
YR681]
Length = 422
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
DG VYDY G D K F+G+P RI EDYLRILR+FR A +P+ ++ L+
Sbjct: 139 DGVVYDYVGGIADAKARRVRFIGNPDQRIAEDYLRILRFFRIHAAFGAGDPD--RDGYLA 196
Query: 708 AIKNNLDGLHNISGERIWTELNKIL 732
I+ GL ++S ER+ E+ K+L
Sbjct: 197 CIRGRA-GLAHLSAERVRMEMLKLL 220
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR D T GR A+V F DW DA RRD T+N +
Sbjct: 98 VTTLREDTETFGRKAKVAFGRDWVKDAERRDFTMNGL 134
>gi|319408915|emb|CBI82572.1| poly(A) polymerase [Bartonella schoenbuchensis R1]
Length = 418
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN-PNNHKEEVLSA 708
G +YD G D++ F+G RI EDYLRILR+FRFFA P+ + +
Sbjct: 136 GQLYDEVGGLNDIESKTIRFIGVAKDRICEDYLRILRFFRFFAWYGGGRPDAQGLKACIS 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K GLH +S ER+W E+ K+L S +L M +L
Sbjct: 196 LKQ---GLHKLSPERVWGEMKKLLTASDPTRTLLWMRQSGIL 234
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 61/107 (57%), Gaps = 11/107 (10%)
Query: 835 ELNKILGGSFSKEMMLKML-EINMFPHLGTDETFATLDFEGLFRSMPI-----PFTLLFS 888
E +I+GG+ +++ + + +I++ + ++ EG F+++P T++
Sbjct: 30 EEARIVGGAVRNQLLNQPISDIDIATTCLPQQVIKRVEKEG-FKAIPTGVDFGTVTVVIE 88
Query: 889 ANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+ + +TTLR D+ TDGR+A+V F DWK DA RRD T+N+++
Sbjct: 89 SCCYE----VTTLRSDIETDGRYAKVAFCRDWKKDAQRRDFTINALY 131
>gi|148284259|ref|YP_001248349.1| poly(A) polymerase [Orientia tsutsugamushi str. Boryong]
gi|146739698|emb|CAM79508.1| polyA polymerase [Orientia tsutsugamushi str. Boryong]
Length = 402
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRF---FARICNNPNNHKEEVLSA 708
+YDYFNG +DLK F+GD +RIQED LRILR+FRF +AR + +E +
Sbjct: 136 LYDYFNGLQDLKDRRVIFIGDSDTRIQEDVLRILRFFRFSSYYAR------SIDQEGYQS 189
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLK 756
+ L +S ER+ EL+KI+ + E ++KM N+ + L+
Sbjct: 190 CAKHAKSLTILSKERVIQELSKIIISPNAYETLVKMAEINITYYIGLR 237
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV GRHA+V+F+ D+ DA RRD T+N++
Sbjct: 91 ITTLRQDVQCYGRHAKVEFSNDYFEDARRRDFTINAL 127
>gi|42540594|gb|AAS19200.1| nitrate reductase [Nicotiana attenuata]
Length = 449
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 305 RIIVTTQESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEI 364
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK + RV+VT+D G TW V+ + ++W W
Sbjct: 365 LPINAWTTQRPYTLRGYAYSGGGKKVTRVEVTLDGGETWQVSTLDHPEKPTKYGKYWCWC 424
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 425 FW---------SLEVEVLDLLSAKE 440
>gi|241205753|ref|YP_002976849.1| Polynucleotide adenylyltransferase region [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240859643|gb|ACS57310.1| Polynucleotide adenylyltransferase region [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 417
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V D G D++ F+GD RI ED+LRILR+FRFFA + + E L A
Sbjct: 133 GEVVDLVGGLADIETHNIRFIGDAARRIAEDHLRILRFFRFFAYYGSGRPDA--EGLKAC 190
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
L +S ER+W+EL K+LG +L M
Sbjct: 191 SLARSKLTTLSAERVWSELRKLLGADDPGRALLWM 225
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
+TTLR DV TDGRHA+V F+ DWK DA RRDLT+N+++ K
Sbjct: 91 VTTLRTDVETDGRHAKVAFSTDWKGDAERRDLTINALYADAK 132
>gi|453330362|dbj|GAC87590.1| poly(A) polymerase [Gluconobacter thailandicus NBRC 3255]
Length = 401
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ DR + +YDYF+G EDL FVG+ RI+ED LR LR+
Sbjct: 113 EDAARRDFTINAMSLDR----NDVLYDYFHGVEDLAAHRVRFVGEAGRRIEEDALRALRF 168
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
FRF AR + + E AI L + +S ER+ +E +IL G
Sbjct: 169 FRFDARYGDGAPD--AEACQAISQRLTLIDTLSAERVASEFLRILTG 213
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR D TDGRHA V +TE+W+ DA RRD T+N+M L
Sbjct: 89 ITTLRRDEETDGRHAVVAWTENWEEDAARRDFTINAMSL 127
>gi|91199952|emb|CAJ72994.1| similar to poly(A) polymerase [Candidatus Kuenenia stuttgartiensis]
Length = 437
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 612 KVLSYRNRREKEDRIGENQPFRKLTLSVQD-KDRSFRLDGTVYD--------YFNGHEDL 662
+V ++R + D G + + + + +D + R F ++G +YD Y G +D+
Sbjct: 78 EVATFRTEKSYSD--GRHPDYVSFSTAEEDVRRRDFTINGLLYDPVKKEMLDYVGGRDDI 135
Query: 663 KKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGE 722
G+ +GDPV R+ ED LR++R RF R N + H EE AI N +H +S E
Sbjct: 136 AAGIIRTIGDPVERLTEDKLRMIRAVRFACRF--NFHIH-EETRQAIINLAPQIHVVSAE 192
Query: 723 RIWTELNKILGG 734
RI EL KI+ G
Sbjct: 193 RIREELQKIITG 204
>gi|395790748|ref|ZP_10470207.1| hypothetical protein MEC_00198 [Bartonella alsatica IBS 382]
gi|395409044|gb|EJF75643.1| hypothetical protein MEC_00198 [Bartonella alsatica IBS 382]
Length = 417
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D+ F+G +RI+EDYLRILR+FRFFA P+ +
Sbjct: 136 GRLYDDVGGLNDIASQTIRFIGIAENRIREDYLRILRFFRFFAWYGAGRPDVQGLKACVC 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGG 734
+K DGL+ +S ERIW E+ K+L
Sbjct: 196 LK---DGLNKLSSERIWGEMKKLLAA 218
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F DWK DA RRD T+N+++
Sbjct: 94 VTTLRSDIETDGRHAKVVFGRDWKKDAERRDFTINALY 131
>gi|294011466|ref|YP_003544926.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Sphingobium
japonicum UT26S]
gi|292674796|dbj|BAI96314.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Sphingobium
japonicum UT26S]
Length = 402
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 651 TVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIK 710
+ D+F G DL+ F+GD +RI ED+LRILRYFRF AR ++ + +E +A +
Sbjct: 136 AITDFFGGVADLRAHRVRFIGDAGARIAEDHLRILRYFRFLARFGHDEPD--DEAYAACR 193
Query: 711 NNLDGLHNISGERIWTELNKIL 732
+ L +S ERI EL K+L
Sbjct: 194 EAANSLMALSRERIADELLKLL 215
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGR A + +T+DW+ DA RRD T+N+++
Sbjct: 92 ITTLRRDVSTDGRRATIAYTDDWRKDAARRDFTINALY 129
>gi|126734430|ref|ZP_01750177.1| polyA polymerase family protein [Roseobacter sp. CCS2]
gi|126717296|gb|EBA14160.1| polyA polymerase family protein [Roseobacter sp. CCS2]
Length = 378
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG + D G DLK F+ D RI+EDYLRILR+FRF+A + + + L+A
Sbjct: 131 DGQIADPLGGLPDLKARRIRFIEDADRRIKEDYLRILRFFRFYAWYGDVNDGPDVDGLAA 190
Query: 709 IKNNLDGLHNISGERIWTELNK 730
+N++GL ++S ERI E+ K
Sbjct: 191 CADNIEGLQSLSVERITAEMLK 212
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGR A V ++++ DA RRD T+N+++
Sbjct: 90 ITTFRRDVATDGRRATVAYSDNMTDDARRRDFTMNALY 127
>gi|357636736|ref|ZP_09134611.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Streptococcus macacae NCTC 11558]
gi|357585190|gb|EHJ52393.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Streptococcus macacae NCTC 11558]
Length = 387
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 645 SFRLDGTVY--DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHK 702
+F LD Y D FNG EDLK + VG+P R +ED LRI+R RF A C N +
Sbjct: 107 AFALDEESYVIDKFNGLEDLKNKILRAVGEPSERFKEDALRIMRGLRFSA--CLNFTI-E 163
Query: 703 EEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKE----MMLKMLYQNL 749
E+ SA++++ + L IS ER + EL+K+L F K+ +ML YQ L
Sbjct: 164 EKTFSAMQDHAELLEKISVERSFIELDKLLQAPFWKQGIRYLMLSHAYQYL 214
>gi|548359|sp|P36859.1|NIA_PETHY RecName: Full=Nitrate reductase [NADH]; Short=NR
gi|484422|pir||JN0665 nitrate reductase (NADH) (EC 1.7.1.1) - petunia
gi|294114|gb|AAA33713.1| nitrate reductase [Petunia x hybrida]
Length = 909
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 309 RIIVTTQESESYYHYKDNRVLPPHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEI 368
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GY++SGGGK + RV+VT+D G TW+V + ++W W
Sbjct: 369 LPINSWTTQRPYTLRGYSYSGGGKKVTRVEVTMDGGETWNVCTVDHPEKPNKYGKYWCWC 428
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 429 FW---------SLEVEVLDLLSAKE 444
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 538 YSMSEVKKHNSADSA-WIIVHGHVYDATRFLKDHPGGIDSILINAGTDCTEEFDAIH--- 593
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 594 -SDKAKKLLEDFRIGEL 609
>gi|92118713|ref|YP_578442.1| polynucleotide adenylyltransferase [Nitrobacter hamburgensis X14]
gi|91801607|gb|ABE63982.1| Polynucleotide adenylyltransferase region [Nitrobacter hamburgensis
X14]
Length = 418
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
DGTV+D+ G +D+ F+GDP RI EDYLRILR+FR A P+ + L+
Sbjct: 135 DGTVHDHVGGLDDIAARRVRFIGDPDRRIAEDYLRILRFFRIHAAYGAGEPD--RAGYLA 192
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
I+ GL +S ER+ E+ K+L + E ++ M
Sbjct: 193 CIRGRA-GLATLSAERLRAEMLKLLVAEGAVEALVAM 228
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 26/40 (65%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
ITTLR DV T GR A V F DW DA RRD T+N + +G
Sbjct: 94 ITTLREDVETFGRKARVAFGRDWARDAERRDFTINGLSVG 133
>gi|484212|gb|AAA33712.1| nitrate reductase apoenzyme [Petunia x hybrida]
Length = 915
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 309 RIIVTTQESESYYHYKDNRVLPPHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEI 368
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GY++SGGGK + RV+VT+D G TW+V + ++W W
Sbjct: 369 LPINSWTTQRPYTLRGYSYSGGGKKVTRVEVTMDGGETWNVCTVDHPEKPNKYGKYWCWC 428
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 429 FW---------SLEVEVLDLLSAKE 444
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 544 YSMSEVKKHNSADSA-WIIVHGHVYDATRFLKDHPGGIDSILINAGTDCTEEFDAIH--- 599
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 600 -SDKAKKLLEDFRIGEL 615
>gi|381201560|ref|ZP_09908685.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Sphingobium
yanoikuyae XLDN2-5]
Length = 403
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNP-NNHKEEVL 706
L G + DYF G DL F+GD +RI ED+LRILRYFRF AR +N + +
Sbjct: 133 LTGAISDYFGGVADLDARHLRFIGDASARIAEDHLRILRYFRFLARYGDNEVDASAHDAC 192
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
A N+L L S ERI EL K+L
Sbjct: 193 VAAANSLMAL---SRERIADELLKLL 215
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGR A + +T+DW+ DA RRD T N+++
Sbjct: 92 ITTLRRDVSTDGRRATIAYTDDWQQDAARRDFTFNALY 129
>gi|410943527|ref|ZP_11375268.1| poly(A) polymerase [Gluconobacter frateurii NBRC 101659]
Length = 403
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 627 GENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILR 686
E+ R T++ DR ++DYF G +DL FVG+ RI+ED LR LR
Sbjct: 112 AEDAARRDFTINAMSLDRH----DVLHDYFGGLKDLPDHRVRFVGEAGRRIEEDALRALR 167
Query: 687 YFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
+FRF AR + + E AI LD + +S ERI +EL +IL G E + M
Sbjct: 168 FFRFDARYGHGEPD--AEACQAISERLDLIDALSAERIASELLRILTGPRVVETLSVMKD 225
Query: 747 QNLL 750
LL
Sbjct: 226 VGLL 229
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR D TDGRHA V +T DW DA RRD T+N+M L
Sbjct: 89 ITTLRRDEETDGRHAVVSWTGDWAEDAARRDFTINAMSL 127
>gi|315122580|ref|YP_004063069.1| poly(A) polymerase [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495982|gb|ADR52581.1| poly(A) polymerase protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 421
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G V DY G DLK F+G+ RI EDYLRILR+FRFFA ++ + L+A
Sbjct: 133 GRVIDYVGGLNDLKNRTIKFIGNAHHRILEDYLRILRFFRFFAH--YGQHDIDPDGLAAS 190
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
GL +S ERIW E+ KIL
Sbjct: 191 IQAKAGLKILSSERIWLEIKKIL 213
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR D+ TDGRHA+V FT DWK D+ RRD T+N+++
Sbjct: 91 ITTLRSDLITDGRHAKVVFTHDWKADSLRRDFTINALY 128
>gi|391336639|ref|XP_003742686.1| PREDICTED: cytochrome b5-like [Metaseiulus occidentalis]
Length = 131
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQ 82
YSL D+ H + KSS W+V +G+YD+T+F++ HPGGE ++ GG E V
Sbjct: 4 YSLEDVAKHNE-KSSCWLVIHEGIYDVTKFMEEHPGGEEVLLEQGGR-ESTEVFEDVGHS 61
Query: 83 DEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRS 121
+ EL+ Y+IG++ ED K K +A EP +S
Sbjct: 62 TDARELMAKYKIGDLCDED-KAKIKKVAEKSKFPEPSQS 99
>gi|315652418|ref|ZP_07905406.1| poly A polymerase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485317|gb|EFU75711.1| poly A polymerase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 400
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+ D + G EDL+KG+ VGD R ED LR+LR RF +++ ++ AIK
Sbjct: 127 IVDLYKGREDLQKGIIRAVGDAGKRFDEDALRMLRAIRFASQLGFEIEDN---TFEAIKQ 183
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL------FSKL 755
L N+S ERI+ ELNK+L G F++ +K++Y + L FSKL
Sbjct: 184 KAKLLVNVSKERIFVELNKLLCGDFAQN--IKLIYTSGLCKYIGKEFSKL 231
>gi|419718510|ref|ZP_14245827.1| tRNA nucleotidyltransferase/poly(A) polymerase family / putative
RNA and SrmB binding site of polymerase A / putative
tRNA nucleotidyltransferase domain 2 multi-domain
protein [Lachnoanaerobaculum saburreum F0468]
gi|383305345|gb|EIC96713.1| tRNA nucleotidyltransferase/poly(A) polymerase family / putative
RNA and SrmB binding site of polymerase A / putative
tRNA nucleotidyltransferase domain 2 multi-domain
protein [Lachnoanaerobaculum saburreum F0468]
Length = 400
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+ D + G EDL+KG+ VGD R ED LR+LR RF +++ ++ AIK
Sbjct: 127 IVDLYKGREDLQKGIIRAVGDAGKRFDEDALRMLRAIRFASQLGFEIEDN---TFEAIKQ 183
Query: 712 NLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL------FSKL 755
L N+S ERI+ ELNK+L G F++ +K++Y + L FSKL
Sbjct: 184 KAKLLVNVSKERIFAELNKLLCGDFAQN--IKLIYTSGLCKYIGKEFSKL 231
>gi|302667137|ref|XP_003025160.1| hypothetical protein TRV_00686 [Trichophyton verrucosum HKI 0517]
gi|291189248|gb|EFE44549.1| hypothetical protein TRV_00686 [Trichophyton verrucosum HKI 0517]
Length = 387
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLK 305
++ + ES + +QQ+DYK P +T W+ + ++ P+IQE+PV S + P +K
Sbjct: 223 RITVQGDESPNFYQQHDYKVLPPEATTWEIAENYWSTVPSIQEMPVNSVVACPDDGETVK 282
Query: 306 LENHQ-MEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
L + +EV+GYA G + +VRV+V+ D G +W A Q+ W WTLW+A
Sbjct: 283 LSSDGCIEVKGYAVPTGSQGPVVRVEVSADGGESWVDAELQDDKPQS----KWTWTLWKA 338
Query: 364 TI 365
+
Sbjct: 339 RV 340
>gi|357542305|gb|AET85052.1| nitrate reductase [Nannochloropsis sp. W2J3B]
Length = 865
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD---FAKSPA--IQELPVISAICLPVADAK 303
++ +S ES S + +D + S D + D + + P I +L + SAI P D +
Sbjct: 295 RITISRQESQSFYHFHDNRVLPSSVDQERADNEGWWRKPEYIINDLNLNSAITHPTHDEE 354
Query: 304 LKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLW 361
+ L+ ++QGYA+ GGG+ + R++V++D G++W +A + ++ R W W +W
Sbjct: 355 IPLKKGTYKLQGYAYCGGGRQVQRMEVSLDDGKSWELAQLSSEEYPTEHGRFWCWRIW 412
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 35 KSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVHLQDEVFELLESY 92
K+ W+ + VYD+T ++Q HPGG I+M A + E F A++ + +L+ Y
Sbjct: 523 KTDCWIAVKGQVYDVTPYLQEHPGGVAAIVMNAGKDATEDFEAIH----SKRAWAMLDEY 578
Query: 93 RIGNI-------SQEDSKLAAKDIAS 111
+G + S E S +AA A+
Sbjct: 579 LVGTLGASLTSSSPEASAIAAPKEAA 604
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPD 468
VCA KE + KG +WG AV + WTG L +L+ G+ PD
Sbjct: 139 VCAGNRRKEVNVTRQSKGFSWGSGAVSTSIWTGVPLHVLLRHCGVDPD 186
>gi|284447525|gb|ADB88836.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 130
Score = 66.2 bits (160), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 286 IQELPVISAICLPVADAKLKL---ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
I +L + SA+ P D LKL + + ++GYA+SGGG+ ++R +++ D G+ WH+A
Sbjct: 11 INDLNINSAMVYPQHDEVLKLNGKSDQKYTLKGYAYSGGGRKVIRSEISYDGGKAWHLAK 70
Query: 343 FTGQDSQAPLTRHWGWTLWRATIPVDP--KTKEVSIM--DMLMGKKPHDI 388
T ++ +HW W W I V +E+S+ D M +P DI
Sbjct: 71 LTHPETPNAYGKHWCWCFWELEINVLDLVGIEEISLRSWDEGMNTQPKDI 120
>gi|85714277|ref|ZP_01045265.1| polynucleotide adenylyltransferase region protein [Nitrobacter sp.
Nb-311A]
gi|85698724|gb|EAQ36593.1| polynucleotide adenylyltransferase region protein [Nitrobacter sp.
Nb-311A]
Length = 418
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
DGTV+D+ G +D+ F+GDP RI EDYLRILR+FR A P+ + L+
Sbjct: 135 DGTVHDHVGGLDDIAAKRVRFIGDPDRRIAEDYLRILRFFRIHAAYGAGEPDRNGH--LA 192
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
I+ GL +S ER+ E+ K+L + E ++ M
Sbjct: 193 CIRGRA-GLVTLSAERVRAEMLKLLVAEGAVEAVVAM 228
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV T GR A+V F DW DA RRD T+N +
Sbjct: 94 ITTLREDVETFGRRAKVAFGRDWARDAERRDFTINGL 130
>gi|431806053|ref|YP_007232954.1| tRNA nucleotidyltransferase [Liberibacter crescens BT-1]
gi|430800028|gb|AGA64699.1| tRNA nucleotidyltransferase [Liberibacter crescens BT-1]
Length = 419
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN-PNNHKEEVLS 707
DG + D NG D++ F+G+ RI EDYLRILR+FRFFA P+
Sbjct: 134 DGRIIDLVNGLADIQTRTVRFIGNADERISEDYLRILRFFRFFAHYGGKRPDFVGLRAAI 193
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGS 735
KNNL L S ERIW E+ K+L +
Sbjct: 194 RAKNNLKKL---SAERIWLEMKKLLEAA 218
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPFTLLFSANF-FRNL 895
+I+GG+ +M L++ +I++ L + GL +++PI + F + +
Sbjct: 32 RIVGGAIRDSLMNLEVKDIDIATTLSPKDVMQRAQKAGL-KAIPIGISHGTVKVFSHKRI 90
Query: 896 ARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F +DW +DA+RRD T+N+++
Sbjct: 91 FDVTTLRNDLVTDGRHAQVVFIDDWSIDAHRRDFTINALY 130
>gi|217976975|ref|YP_002361122.1| polynucleotide adenylyltransferase [Methylocella silvestris BL2]
gi|217502351|gb|ACK49760.1| Polynucleotide adenylyltransferase region [Methylocella silvestris
BL2]
Length = 419
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++D+ D++ F+GDP +RI+EDYLRILR+FRF A P + + +L+A+
Sbjct: 143 GRLFDFVGALADIEARRVRFIGDPETRIREDYLRILRFFRFSADYGEGPIDG-DGLLAAM 201
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ GL +S ER+ EL K++ + E + M LL
Sbjct: 202 RARA-GLAQLSRERVRAELLKLVAARRAPEAVEAMSGAGLL 241
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 884 TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
TLL F +T+LR D+ TDGR A V+F D+ DA RRD T+N++FL
Sbjct: 91 TLLVDGRAFE----VTSLREDIETDGRRATVRFGRDFCADALRRDFTINALFL 139
>gi|86748321|ref|YP_484817.1| polynucleotide adenylyltransferase [Rhodopseudomonas palustris
HaA2]
gi|86571349|gb|ABD05906.1| Polynucleotide adenylyltransferase region [Rhodopseudomonas
palustris HaA2]
Length = 418
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V+DY G +D+ F+GDP RI EDYLRILR+FR A P + L+
Sbjct: 135 DGVVHDYVGGLDDIAARRVRFIGDPDQRIAEDYLRILRFFRIHAAYGVGP-PQRAGTLAC 193
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
I+ GL +S ER+ E+ K++
Sbjct: 194 IRGRA-GLATLSAERMRMEMLKLM 216
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 815 SAIKKNLDGLHNISGERIWTELN------KILGGSFSKEMM-LKMLEINMFPHLGTDETF 867
A++ + LH ++ LN +++GG+ ++ L + ++++ DE
Sbjct: 4 GAVRADAPWLHAGPAAQVLALLNHDGEEARVVGGAVRNALLKLPIGDVDIATTALPDEVV 63
Query: 868 ATLDFEGLFRSMPI-----PFTLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKL 922
G+ +++P TL+ + F +TTLR DV T GR A+V F DW
Sbjct: 64 RRARAAGI-KAVPTGVEHGTVTLVLDGHGFE----VTTLREDVETFGRKAKVAFGRDWLR 118
Query: 923 DANRRDLTVNSM 934
DA RRD T+N +
Sbjct: 119 DAQRRDFTINGL 130
>gi|109659810|dbj|BAE96752.1| nitrate reductase 2 [Nicotiana benthamiana]
Length = 904
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 305 RIIVTTQESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEI 364
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GY++SGGGK + RV+VT+D G TW V+ + ++W W
Sbjct: 365 LPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTLDGGETWQVSTLDHPEKPTKYGKYWCWC 424
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 425 FW---------SLEVEVLDLLSAKE 440
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 534 YSMSEVRKHSSADSA-WIIVHGHIYDATRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 589
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 590 -SDKAKKLLEDFRIGEL 605
>gi|340027958|ref|ZP_08664021.1| polynucleotide adenylyltransferase region [Paracoccus sp. TRP]
Length = 388
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
DRI E+ R T++ + G V D G EDL + FVGDP RI EDYLR
Sbjct: 110 DRIEEDAQRRDFTMNAIYATST----GEVLDPVGGLEDLARRRLRFVGDPHDRISEDYLR 165
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
ILR+FRF A + + ++A +GL IS ERI E+ ++L
Sbjct: 166 ILRFFRFLAWYG---REAELQAVAACGELREGLARISRERIGYEIRRLL 211
>gi|427407658|ref|ZP_18897860.1| hypothetical protein HMPREF9718_00334 [Sphingobium yanoikuyae ATCC
51230]
gi|425714162|gb|EKU77173.1| hypothetical protein HMPREF9718_00334 [Sphingobium yanoikuyae ATCC
51230]
Length = 403
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
L G + DYF G DL F+GD +RI ED+LRILRYFRF AR +N +
Sbjct: 133 LTGAISDYFGGVADLDARHLRFIGDASARIAEDHLRILRYFRFLARYGDNEVD--ASAYD 190
Query: 708 AIKNNLDGLHNISGERIWTELNKIL 732
A + L +S ERI EL K+L
Sbjct: 191 ACVAAANSLMALSRERIADELLKLL 215
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGR A + +T+DW+ DA RRD T N+++
Sbjct: 92 ITTLRRDVSTDGRRATIAYTDDWQQDAARRDFTFNALY 129
>gi|359770105|gb|AEV66151.1| nitrate reductase [Nicotiana tabacum]
Length = 904
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 305 RIIVTTQESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEI 364
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GY++SGGGK + RV+VT+D G TW V + ++W W
Sbjct: 365 LPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTLDGGETWQVCTLDHPEKPTKYGKYWCWC 424
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 425 FW---------SLEVEVLDLLSAKE 440
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 534 YSMSEVRKHSSADSA-WIIVHGHIYDATRFLKDHPGGSDSILINAGTDCTEEFDAIH--- 589
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 590 -SDKAKKLLEEFRIGEL 605
>gi|730139|sp|P39865.1|NIA1_PHAVU RecName: Full=Nitrate reductase [NADH] 1; Short=NR-1
gi|21019|emb|CAA37672.1| nitrate reductase [Phaseolus vulgaris]
Length = 881
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++++S+ +S SH+ D K F D + + + I E+ + S I P
Sbjct: 289 RIVVSNQQSQSHYHYKDNKLFPSHVDAELANEEDWWYKPEYIINEVNINSVITTPSHQEI 348
Query: 304 LKLENHQMEV----QGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++ +GYA+SGGG+ + RV+VT+D G TW V + + ++W W
Sbjct: 349 LPINSWTTQMPYSMRGYAYSGGGRKVTRVEVTLDGGETWQVCSVERLEKPNKYGKYWCWC 408
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ D A N P+++
Sbjct: 409 FW---------SLEVEVLDILGAKEIAVRAWDEAQNTQPEKL 441
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGE--IIMKAAGGSIEPFWAMYGVH 80
YSLS+++ H + + S W++ VYD T F++ HPGGE I++ A E F A++
Sbjct: 518 YSLSEVRRHNN-RDSAWIIVNGHVYDCTRFLKDHPGGEDSILLNAGTDCTEEFEAIH--- 573
Query: 81 LQDEVFELLESYRIGNISQED 101
D+ ++LE YRIG + D
Sbjct: 574 -SDKAKKMLEDYRIGELMTTD 593
>gi|414163417|ref|ZP_11419664.1| hypothetical protein HMPREF9697_01565 [Afipia felis ATCC 53690]
gi|410881197|gb|EKS29037.1| hypothetical protein HMPREF9697_01565 [Afipia felis ATCC 53690]
Length = 422
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN-PNNHKE 703
S DG V+D+ G D++ F+GDP RI ED+LRILR+FR A P+
Sbjct: 135 SLSADGKVHDHVGGLADIEARRVRFIGDPARRIAEDFLRILRFFRIHAAYGQGEPDRAAV 194
Query: 704 EVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
E A + DGL ++S ER+ E+ K++ + + ++ M LL
Sbjct: 195 EACIAAR---DGLASLSAERLRMEMLKLVVAKGAADALVAMEDGGLL 238
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR DV T GR A+V F DW DA RRD T+N + L
Sbjct: 98 VTTLREDVETYGRKAKVAFGRDWVRDAERRDFTINGLSL 136
>gi|395767361|ref|ZP_10447896.1| hypothetical protein MCS_00829 [Bartonella doshiae NCTC 12862]
gi|395414674|gb|EJF81116.1| hypothetical protein MCS_00829 [Bartonella doshiae NCTC 12862]
Length = 417
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
DG +YD G D+ F+G RI+EDYLRILR+FRFFA P+ +
Sbjct: 135 DGHLYDAVGGLNDIASRTVRFIGIAEKRIREDYLRILRFFRFFAWYGAGRPDAQGLKACV 194
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K GL +S ERIW E+ K+L +L M +L
Sbjct: 195 FLKQ---GLKKLSSERIWDEMKKLLAAPDPTRALLWMRQSGIL 234
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGR+A+V F DW+ DA RRD T+N+++
Sbjct: 94 VTTLRSDIETDGRYAKVDFGRDWQKDAERRDFTINALY 131
>gi|77799302|dbj|BAE46746.1| nitrate reductase [Nicotiana benthamiana]
Length = 904
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 305 RIIVTTQESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEI 364
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GY++SGGGK + RV+VT+D G TW V+ + ++W W
Sbjct: 365 LPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTLDGGETWQVSTLDHPEKPTKYGKYWCWC 424
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 425 FW---------SLEVEVLDLLSAKE 440
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 534 YSMSEVRKHSSADSA-WIIVHGHIYDATRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 589
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 590 -SDKAKKLLEDFRIGEL 605
>gi|395778456|ref|ZP_10458968.1| hypothetical protein MCU_00669 [Bartonella elizabethae Re6043vi]
gi|423715233|ref|ZP_17689457.1| hypothetical protein MEE_00658 [Bartonella elizabethae F9251]
gi|395417664|gb|EJF84001.1| hypothetical protein MCU_00669 [Bartonella elizabethae Re6043vi]
gi|395430069|gb|EJF96120.1| hypothetical protein MEE_00658 [Bartonella elizabethae F9251]
Length = 417
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D+ F+G +RI+EDYLRILR+FRFFA P+ +
Sbjct: 136 GNLYDDVGGLSDIASRTVRFIGFAENRIREDYLRILRFFRFFAWYGAGRPDGQGLKACVR 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K+ GL +S ERIW E+ K+L S +L M +L
Sbjct: 196 LKH---GLKKLSSERIWAEMKKLLLASDPTRALLWMRQSRIL 234
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F DWK DA RRD T+N+++
Sbjct: 94 VTTLRSDIETDGRHAKVVFGRDWKKDAERRDFTINALY 131
>gi|315048965|ref|XP_003173857.1| sulfite oxidase [Arthroderma gypseum CBS 118893]
gi|311341824|gb|EFR01027.1| sulfite oxidase [Arthroderma gypseum CBS 118893]
Length = 411
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 9/120 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLK 305
++ + ES S +QQ+DY+ P +T W+ + ++ P+IQE+PV S + P +K
Sbjct: 247 RITVQTDESPSFYQQHDYRVLPPEATTWEVAEKYWSTVPSIQEMPVNSVVACPDDGDTVK 306
Query: 306 L-ENHQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
L + +EV+GYA G + IV+V+V+ D G++W A Q+ W WTLW+
Sbjct: 307 LSSDGCIEVKGYAVPAGSQGPIVQVEVSTDGGKSWVDAELQDDKPQS----KWSWTLWKV 362
>gi|128187|sp|P11605.1|NIA1_TOBAC RecName: Full=Nitrate reductase [NADH] 1; Short=NR1
gi|19889|emb|CAA32216.1| nitrate reductase [Nicotiana tabacum]
Length = 904
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 305 RIIVTTQESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEI 364
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GY++SGGGK + RV+VT+D G TW V + ++W W
Sbjct: 365 LPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTLDGGETWQVCTLDHPEKPTKYGKYWCWC 424
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 425 FW---------SLEVEVLDLLSAKE 440
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 534 YSMSEVRKHSSADSA-WIIVHGHIYDATRFLKDHPGGSDSILINAGTDCTEEFDAIH--- 589
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 590 -SDKAKKLLEEFRIGEL 605
>gi|374291884|ref|YP_005038919.1| putative tRNA nucleotidyltransferase/poly(A) polymerase
[Azospirillum lipoferum 4B]
gi|357423823|emb|CBS86683.1| Putative tRNA nucleotidyltransferase/poly(A) polymerase
[Azospirillum lipoferum 4B]
Length = 416
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R LT++ S DG ++D F G DL G FVG+ RI+ED LR+LR+
Sbjct: 118 EDAARRDLTMNAL----SCTPDGAMFDPFGGLADLAAGRVRFVGEARRRIEEDVLRLLRF 173
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
FRF A + E L+A + L +SGER+ EL ++L + + M+ Q
Sbjct: 174 FRFHAHYGRGEPD--AEALAACRELAPRLPTLSGERVRGELFRLLTAPCAAAVWRLMMGQ 231
Query: 748 NLL 750
++
Sbjct: 232 GIM 234
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV TDGRHA V+FT+DW DA RRDLT+N++
Sbjct: 94 ITTLRRDVETDGRHARVEFTDDWVEDAARRDLTMNAL 130
>gi|284447513|gb|ADB88830.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 130
Score = 65.9 bits (159), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 286 IQELPVISAICLPVADAKLKL---ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
I +L + SA+ P D LKL + + ++GYA+SGGG+ ++R +++ D G+ WH+A
Sbjct: 11 INDLNINSAMVYPQHDEVLKLNGKSDQKYTLKGYAYSGGGRKVIRSEISYDGGKAWHLAK 70
Query: 343 FTGQDSQAPLTRHWGWTLWRATIPVDP--KTKEVSIM--DMLMGKKPHDI 388
T ++ +HW W W I V +E+S+ D M +P DI
Sbjct: 71 LTHPETPNAYGKHWCWCFWELEINVLDLVGIEEISLRSWDEGMNTQPKDI 120
>gi|227925|prf||1713435A nitrate reductase
Length = 904
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 305 RIIVTTQESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEI 364
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GY++SGGGK + RV+VT+D G TW V + ++W W
Sbjct: 365 LPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTLDGGETWQVCTLDHPEKPTKYGKYWCWC 424
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 425 FW---------SLEVEVLDLLSAKE 440
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 534 YSMSEVRKHSSADSA-WIIVHGHIYDATRFLKDHPGGSDSILINAGTDCTEEFDAIH--- 589
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 590 -SDKAKKLLEEFRIGEL 605
>gi|319898483|ref|YP_004158576.1| poly(A) polymerase [Bartonella clarridgeiae 73]
gi|319402447|emb|CBI75988.1| poly(A) polymerase [Bartonella clarridgeiae 73]
Length = 417
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YD G D+ F+G RI EDYLRILR+FRFFA E L A
Sbjct: 136 GKIYDEVGGMNDIATRTIRFIGVSEQRICEDYLRILRFFRFFA--WYGKGRPDAEGLKAC 193
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
GL +S ERIW E+ K+L S +L M +L
Sbjct: 194 VRLKHGLQKLSPERIWEEMKKLLAASDPTRALLWMRQSGIL 234
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F+ DWK DA RRD T+N+++
Sbjct: 94 VTTLRSDIETDGRHAKVIFSRDWKKDAERRDFTINALY 131
>gi|284447519|gb|ADB88833.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284447543|gb|ADB88845.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284447582|gb|ADB88864.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284447598|gb|ADB88872.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284447618|gb|ADB88882.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 130
Score = 65.9 bits (159), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 286 IQELPVISAICLPVADAKLKL---ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
I +L + SA+ P D LKL + + ++GYA+SGGG+ ++R +++ D G+ WH+A
Sbjct: 11 INDLNINSAMVYPQHDEVLKLNGKSDQKYTLKGYAYSGGGRKVIRSEISYDGGKAWHLAK 70
Query: 343 FTGQDSQAPLTRHWGWTLWRATIPVDP--KTKEVSIM--DMLMGKKPHDI 388
T ++ +HW W W I V +E+S+ D M +P DI
Sbjct: 71 LTHPETPNAYGKHWCWCFWELEINVLDLVGIEEISLRSWDEGMNTQPKDI 120
>gi|296410754|ref|XP_002835100.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627875|emb|CAZ79221.1| unnamed protein product [Tuber melanosporum]
Length = 402
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDW--DTVDF-AKSPAIQELPVISAICLPVADAKL- 304
++ + D ES++ + Q DYK P D D+ K+ +Q +PV SAIC P +
Sbjct: 201 RITIQDEESSNFYMQRDYKILPPEIDTRKKANDYWHKAKPLQMMPVNSAICYPATGDTIF 260
Query: 305 --KLENHQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQ------APLTRH 355
KL + ++E+ GYA G + +V+V+++IDQG+TW + + A
Sbjct: 261 LDKLTDGELEIAGYALPKGDEGPVVKVEISIDQGKTWDESRLLYPSPEELCKPGAAKKYR 320
Query: 356 WGWTLWRATIPVDPKTKEV 374
W W +W+ +P + KTK++
Sbjct: 321 WAWAIWQHKLPAE-KTKKM 338
>gi|128190|sp|P08509.2|NIA2_TOBAC RecName: Full=Nitrate reductase [NADH] 2; Short=NR2
gi|19891|emb|CAA32217.1| nitrate reductase [Nicotiana tabacum]
Length = 904
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 305 RIIVTTQESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEI 364
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GY++SGGGK + RV+VT+D G TW V+ + ++W W
Sbjct: 365 LPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTLDGGETWQVSTLDHPEKPTKYGKYWCWC 424
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 425 FW---------SLEVEVLDLLSAKE 440
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 534 YSMSEVRKHSSADSA-WIIVHGHIYDATRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 589
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 590 -SDKAKKLLEDFRIGEL 605
>gi|402770835|ref|YP_006590372.1| polynucleotide adenylyltransferase region [Methylocystis sp. SC2]
gi|401772855|emb|CCJ05721.1| Polynucleotide adenylyltransferase region [Methylocystis sp. SC2]
Length = 415
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHK-- 702
S DG ++DY +G D++ F+GD +RI+EDYLRILR+FRF A P + +
Sbjct: 126 SLSSDGEIHDYTDGLADIEARRIRFIGDAATRIREDYLRILRFFRFNASHGEGPFDREGL 185
Query: 703 EEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
E + A +N L +S ERI EL K+L + +++ M + ++
Sbjct: 186 HESIVAREN----LSRLSRERIRAELMKLLLARRAPDVLRAMSHAGVI 229
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 11/106 (10%)
Query: 837 NKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPF-----TLLFSAN 890
+++GG+ M+ L EI++ D A GL + +P T++ +
Sbjct: 27 TRVVGGAVRDAMLGLPPHEIDLATTALPDAVLAAARSAGL-KGVPTGIEHGTVTIVVAGT 85
Query: 891 FFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
F +TTLR DV TDGR A+V+F D++ DA RRD T+N++ L
Sbjct: 86 PFE----VTTLREDVETDGRFAKVRFGGDFEQDAKRRDFTINALSL 127
>gi|355673631|ref|ZP_09059106.1| hypothetical protein HMPREF9469_02143 [Clostridium citroniae
WAL-17108]
gi|354814344|gb|EHE98944.1| hypothetical protein HMPREF9469_02143 [Clostridium citroniae
WAL-17108]
Length = 429
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 607 GTVTA-------KVLSYRNRREKEDRIGENQPFRKLTLSVQDKDRSFRLDGTVY------ 653
GTVT +V +YR E D N L+ K R F ++ Y
Sbjct: 68 GTVTVMMGNEGYEVTTYRIDGEYSDGRHPNHVEFTPNLAEDLKRRDFTINAMAYNSRTGF 127
Query: 654 -DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNN 712
D F G EDLKKG+ VG+P+ R ED LRILR RF A++ + E + I N
Sbjct: 128 VDEFGGAEDLKKGIIRCVGEPMDRFTEDALRILRAIRFSAQLGFLIEDRTYEAIRKIAPN 187
Query: 713 LDGLHNISGERIWTELNKILGGSFSKEMML 742
+ +H +S ERI TEL K+L S M L
Sbjct: 188 M--VH-VSKERIQTELTKLLLSSHPGHMEL 214
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEV 433
+ DM++G++P D D T+A PDQ+K +F R + G +HGTV M + E +EV
Sbjct: 29 CVRDMMLGREPGDWDITTSALPDQVKQVF-----RRTVDTGIQHGTVTVMMGN-EGYEV 81
>gi|227926|prf||1713435B nitrate reductase
Length = 904
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 305 RIIVTTQESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEI 364
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GY++SGGGK + RV+VT+D G TW V+ + ++W W
Sbjct: 365 LPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTLDGGETWQVSTLDHPEKPTKYGKYWCWC 424
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 425 FW---------SLEVEVLDLLSAKE 440
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 534 YSMSEVRKHSSADSA-WIIVHGHIYDATRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 589
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 590 -SDKAKKLLEDFRIGEL 605
>gi|220929703|ref|YP_002506612.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Clostridium cellulolyticum H10]
gi|220000031|gb|ACL76632.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Clostridium cellulolyticum H10]
Length = 448
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 38/209 (18%)
Query: 596 KHGYQLRIAGEGTVTAKVLSYRNRREKEDRIGENQPFRK-----LTLSVQDK--DRSFRL 648
KHG + GE + +V +YR G+ + FR+ T S+++ R F +
Sbjct: 70 KHGTVTVLIGE--MCLEVTTYRID-------GDYKDFRRPDKVEFTSSLREDLARRDFTI 120
Query: 649 DGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNH 701
+ Y D+F G +DLKK + VGDP R +ED LR++R RF A++
Sbjct: 121 NAMAYHPEQGLVDFFGGLQDLKKRIIKAVGDPEQRFREDALRMMRAIRFSAQL---GFEI 177
Query: 702 KEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMR 761
+E AIK+N + NIS ERI ELNK L + +N F+ L T +
Sbjct: 178 EEATFEAIKSNSALIANISSERIRDELNKTL------------VSENPEHFNYLHQTGIL 225
Query: 762 EYIVELMKYKEKSELIKDFHKWRLPTFPM 790
YI+ + K+E I +H + + M
Sbjct: 226 PYILPEFERCYKTEQINPYHVYNVADHTM 254
>gi|1171707|sp|P43101.1|NIA_CICIN RecName: Full=Nitrate reductase [NADH]; Short=NR
gi|662902|emb|CAA58909.1| nitrate reductase (NADH) [Cichorium intybus]
Length = 920
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D + + + I EL + S I P +
Sbjct: 307 RIIVTTPESESYYHFKDNRVLPSHVDAELANSEGWWYKPEYIINELNINSVITTPCHEEI 366
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGGK + RV+VT+D G TW+V ++ ++W W
Sbjct: 367 LPINSWTTQRPYTLRGYAYSGGGKKVTRVEVTMDGGETWNVCTLDHKEKPTRYAKYWCWC 426
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ D N PD++
Sbjct: 427 FW---------SLEVEVLDLLSAKEIAVRAWDETLNTQPDKL 459
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++S+++ H S+ W+V +YD T F++ HPGG I++ A E F A++
Sbjct: 537 FTMSEVKKHNSADSA-WIVVHGHIYDCTSFLKDHPGGSDSILLNAGTDCTEEFDAIH--- 592
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE YR+G +
Sbjct: 593 -SDKAKKLLEEYRVGEL 608
>gi|348670601|gb|EGZ10422.1| hypothetical protein PHYSODRAFT_337236 [Phytophthora sojae]
Length = 828
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVD----FAKSP-AIQELPVISAICLPVADA 302
++ +SD ES++H D + +T +AKSP AI EL + +AI P D
Sbjct: 218 ARIHVSDRESSNHHHIMDNRVLPSHLTAETATAEGWWAKSPYAIMELNINAAIIEPNHDD 277
Query: 303 KLKLEN-------HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH 355
L L ++GYA+SGGG+ ++RV+VT+D G TW +A + +
Sbjct: 278 LLALSEDGAVNDIETFTIKGYAYSGGGRRVIRVEVTLDDGATWQLARIIYHEKPNAYGKM 337
Query: 356 WGWTLWRATIPVDP--KTKEVSI 376
W W + +PV + +E+S+
Sbjct: 338 WCWVHYELVVPVGSLLRAREISV 360
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGS--IEPFW 74
+S LP S ++ H + K S W + R VYD T F+ HPGG + GG+ + F
Sbjct: 458 LSGLPLISADEVAKH-NTKESCWFICRGLVYDATPFLDEHPGGATSILLCGGTDCTDEFE 516
Query: 75 AMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRSPLLKATSL 129
+++ + +++L+ Y IG A D AS E L AT +
Sbjct: 517 SIHST----KAWQMLKKYCIGRCPSAGDDSGASDTASSSADHEETDVALKGATKV 567
>gi|300814961|ref|ZP_07095189.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300510931|gb|EFK38203.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 445
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
D I ++ R T+S D+S+ +YD FNG DLK + GD RI+ED LR
Sbjct: 101 DSIDDDLARRDFTISAMAMDKSY----NIYDPFNGIRDLKNKIIRACGDANKRIEEDALR 156
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
ILR RF R + EE+ AI N + L NI+ ERI++E+ KI+
Sbjct: 157 ILRAIRFATRFKFYLD---EELFDAISLNRNLLKNIARERIFSEICKII 202
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 28/142 (19%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
+ D+L+G +P+D D TNA P Q+K +F E K+ + G K+GT+ D+ +E+
Sbjct: 25 CLRDILLGIRPNDFDITTNARPSQVKEVFREYKIFDY---GIKYGTITVEYRDRL-YEIT 80
Query: 435 PVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS--LDSA--DVQHVHVEIWSKAVDS 490
+ T++ R PD+ LDS D+ I + A+D
Sbjct: 81 TFR---------SEGTYSDNR----------RPDRVLFLDSIDDDLARRDFTISAMAMDK 121
Query: 491 SYNTQPESFANIWNLRGVLSNA 512
SYN + F I +L+ + A
Sbjct: 122 SYNIY-DPFNGIRDLKNKIIRA 142
>gi|395781875|ref|ZP_10462285.1| hypothetical protein MCY_00682 [Bartonella rattimassiliensis 15908]
gi|395420317|gb|EJF86598.1| hypothetical protein MCY_00682 [Bartonella rattimassiliensis 15908]
Length = 415
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D+ F+G RI EDYLRILR+FRFFA P+ +
Sbjct: 134 GNLYDDVGGLSDIASRTVRFIGVAEDRICEDYLRILRFFRFFAWYGVGRPDAQGLKACVR 193
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K+ GL +S ERIW E+ K+L S +L M +L
Sbjct: 194 LKH---GLKKLSSERIWAEMKKLLAASDPTRALLWMRQSRIL 232
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F DWK DA RRD T+N+++
Sbjct: 92 VTTLRSDIETDGRHAKVAFGRDWKKDAERRDFTINALY 129
>gi|49475914|ref|YP_033955.1| poly(A) polymerase [Bartonella henselae str. Houston-1]
gi|49238722|emb|CAF27976.1| Poly(a) polymerase [Bartonella henselae str. Houston-1]
Length = 417
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G +D+ F+G RI+EDYLRILR+FRFFA P+ +
Sbjct: 136 GNLYDAVGGLDDIASRTVRFIGIAEKRIREDYLRILRFFRFFAWYGAGRPDVQGLKACVC 195
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
+K+ GL +S ERIW E+ K+L
Sbjct: 196 LKH---GLQKLSSERIWGEMKKLL 216
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 76/143 (53%), Gaps = 16/143 (11%)
Query: 795 IRQFFARICNNPNNHKEEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMMLK-ML 853
IRQ F ++ ++H +++L + +LDG E +I+GG+ +++ + +
Sbjct: 3 IRQDFKQVDWLQHSHIQKLLHVL--SLDG-----------EEARIVGGAVRNQLLEQPIS 49
Query: 854 EINMFPHLGTDETFATLDFEGLFRSMPIPFTLLFSANFFRNLA-RITTLRIDVTTDGRHA 912
++++ + ++ G F+++P ++ + +TTLR D+ TDGRHA
Sbjct: 50 DVDIATTCLPQQIIVRVEEAG-FKAIPTGIAFGTVTVVSQSCSYEVTTLRSDIETDGRHA 108
Query: 913 EVQFTEDWKLDANRRDLTVNSMF 935
+V F DW+ DA RRD T+N+++
Sbjct: 109 KVAFGRDWQKDAERRDFTMNALY 131
>gi|24474446|gb|AAN15927.1| nitrate reductase [Tilia platyphyllos]
Length = 894
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D + + + I EL + S I +P D
Sbjct: 294 RIIVTTKESESYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNIXSVITMPCHDEI 353
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGGK + RV+VT+D G TW V + W W
Sbjct: 354 LPINSWTTQMPYTLRGYAYSGGGKKVXRVEVTMDDGETWQVCTLDHPEKPNKYGNFWCWC 413
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 414 FW---------SLEVEVLDLLGAKE 429
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+S+S+++ H S+ W+V +YD T F++ HPGG I++ A E F A++
Sbjct: 523 FSMSEVRKHNSADSA-WIVVHGNIYDCTRFLKDHPGGADSILINAGTDCTEEFDAIH--- 578
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE YR+G +
Sbjct: 579 -SDKAKKLLEDYRVGEL 594
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE +K G WG A + + W G L DVLK GI
Sbjct: 171 VCAGNRRKEQNMIKKTIGSNWGAAGISTSVWRGVLLCDVLKRCGI 215
>gi|393771933|ref|ZP_10360399.1| poly(A) polymerase [Novosphingobium sp. Rr 2-17]
gi|392722609|gb|EIZ80008.1| poly(A) polymerase [Novosphingobium sp. Rr 2-17]
Length = 396
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE-VLSA 708
G + D+F+G DL F+GD RI+ED+LRILRYFRF AR + P + + E S
Sbjct: 136 GKISDWFDGLADLSARRVRFIGDAHQRIREDHLRILRYFRFQARFGSQPADREAENACSE 195
Query: 709 IKNNLDGLHNISGERIWTELNKILG 733
+ L GL S ER+ E +LG
Sbjct: 196 LAATLKGL---SRERVGMETMNLLG 217
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGR A V F DW+ DA RRD T+N+++
Sbjct: 93 ITTLRHDVSTDGRRATVAFASDWREDAARRDFTINALY 130
>gi|359401453|ref|ZP_09194421.1| poly(A) polymerase [Novosphingobium pentaromativorans US6-1]
gi|357597128|gb|EHJ58878.1| poly(A) polymerase [Novosphingobium pentaromativorans US6-1]
Length = 390
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++D+F G DL++ F+GD RI+ED+LRILRYFRF AR + P + + E A
Sbjct: 132 GEIFDFFGGLHDLRQRTVRFIGDARQRIREDHLRILRYFRFQARFGSQPADQEAEEACAE 191
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
L +S ERI E +LG + + +M +L
Sbjct: 192 LAAT--LKGLSRERIGMETMNLLGLAAPSPTLRRMAELGVL 230
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPFT-LLFSANFFRNL 895
+ +GG+ E++ L + +I+M L + A LD G+ R++P +A
Sbjct: 28 RFVGGAVRDELLGLPVKDIDMATTLLPQDVIARLDDAGM-RNVPTGIEHGTVTAVLPGGP 86
Query: 896 ARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGR A V F +W+ DA RRD T+N+++
Sbjct: 87 VEITTLRHDVSTDGRRATVAFASEWRDDAARRDFTINALY 126
>gi|284447390|gb|ADB88770.1| assimilatory nitrate reductase [Rhodomonas salina]
Length = 130
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 286 IQELPVISAICLPVADAKLKLE---NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
I +L + SA+ P D LKL + + ++GYA+SGGG+ ++R +++ D G+ WH+A
Sbjct: 11 INDLNINSAMVYPQHDEVLKLNGKSDQKYTLKGYAYSGGGRKVIRSEISYDGGKAWHLAK 70
Query: 343 FTGQDSQAPLTRHWGWTLWRATIPVDP--KTKEVSI--MDMLMGKKPHDIDF 390
T ++ +HW W W I V +E+S+ D M +P DI +
Sbjct: 71 LTHPETPNAYGKHWCWCFWELEINVLDLVGIEEISLRSWDEGMNTQPKDITW 122
>gi|310817143|ref|YP_003965107.1| poly(A) polymerase [Ketogulonicigenium vulgare Y25]
gi|385234724|ref|YP_005796066.1| tRNA-nucleotidyltransferase 1 [Ketogulonicigenium vulgare WSH-001]
gi|308755878|gb|ADO43807.1| polyA polymerase family protein [Ketogulonicigenium vulgare Y25]
gi|343463635|gb|AEM42070.1| tRNA-nucleotidyltransferase 1 [Ketogulonicigenium vulgare WSH-001]
Length = 373
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGT+ D G D G F+GD +RI+EDYLRILR+FRF A + L+A
Sbjct: 128 DGTLADPVGGLPDALSGTVRFIGDAPTRIREDYLRILRFFRFHAWY-GEAGAIDADGLAA 186
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
DG+ +S ER+ E+ K+L
Sbjct: 187 CAELADGIEGLSRERVGAEMRKLL 210
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITT R DV TDGRHA V F D DA RRD T+N+++
Sbjct: 87 ITTFRRDVETDGRHARVVFGTDLAEDAARRDFTMNALY 124
>gi|189182930|ref|YP_001936715.1| poly(A) polymerase [Orientia tsutsugamushi str. Ikeda]
gi|189179701|dbj|BAG39481.1| poly(A) polymerase [Orientia tsutsugamushi str. Ikeda]
Length = 402
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRF---FARICNNPNNHKEEVLSA 708
+YDYFNG +DLK F+GD +RIQED LRILR+FRF +AR + +E +
Sbjct: 136 LYDYFNGLQDLKDRRVIFIGDSDTRIQEDVLRILRFFRFSSYYAR------SIDQEGYQS 189
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
L +S ER+ EL+KI+ + E ++KM
Sbjct: 190 CAKYAKSLSILSKERVVQELSKIIISPNAYETLVKM 225
Score = 46.6 bits (109), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR D+ GR+A+V+F+ D+ DA RRD T+N++
Sbjct: 91 ITTLRQDIQCYGRYAKVEFSNDYFEDAKRRDFTINAL 127
>gi|325093574|gb|EGC46884.1| sulfite oxidase [Ajellomyces capsulatus H88]
Length = 403
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 8/121 (6%)
Query: 255 HESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLKLE-NHQ 310
HES + +QQ+DYK P + W+ + + K PA+Q +PV S + +P D+ + L + +
Sbjct: 240 HESPNFYQQHDYKILPPEALTWEIAEEYWPKVPAMQCMPVNSVVAVPNDDSTVSLPLSGE 299
Query: 311 MEVQGYAWS-GGGKAIVRVDVTIDQGRTW--HVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+E++G+A G + RV+V++D G+TW ++ DS + W W LWRA + V
Sbjct: 300 LEIKGFAVPFGADGPVTRVEVSVDGGKTWVDTELDYGPHDSNKSKNK-WAWVLWRAAVKV 358
Query: 368 D 368
+
Sbjct: 359 E 359
>gi|254503107|ref|ZP_05115258.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Labrenzia alexandrii DFL-11]
gi|222439178|gb|EEE45857.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Labrenzia alexandrii DFL-11]
Length = 415
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G +YD G ED F+GDP R++EDYLRILR+FR +A + E L A
Sbjct: 138 GKLYDPLGGLEDCLARRVRFIGDPDMRLREDYLRILRFFRIYA--AYGDGDMDAEGLGAC 195
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLY 746
DGL ++S ERI E+ +++ + ++M+Y
Sbjct: 196 LRQRDGLRHLSAERIGHEMRRLVSAP-KAAVAVRMMY 231
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR DV T GR A+V F DWK DA RRD T+N++++
Sbjct: 96 VTTLREDVETYGRQAKVVFGRDWKKDALRRDFTMNALYV 134
>gi|284447521|gb|ADB88834.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 130
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 286 IQELPVISAICLPVADAKLKLE---NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
I +L + SA+ P D LKL + + ++GYA+SGGG+ ++R +++ D G+ WH+A
Sbjct: 11 INDLNINSAMVYPQHDEVLKLNGKSDQKYTLKGYAYSGGGRKVIRSEISYDGGKAWHLAK 70
Query: 343 FTGQDSQAPLTRHWGWTLWRATIPVDP--KTKEVSI--MDMLMGKKPHDIDF 390
T ++ +HW W W I V +E+S+ D M +P DI +
Sbjct: 71 LTHPETPNAYGKHWCWCFWELEINVLDLVGIEEISLRSWDEGMNTQPKDITW 122
>gi|240277494|gb|EER41002.1| sulfite oxidase [Ajellomyces capsulatus H143]
Length = 403
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 8/121 (6%)
Query: 255 HESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLKLE-NHQ 310
HES + +QQ+DYK P + W+ + + K PA+Q +PV S + +P D+ + L + +
Sbjct: 240 HESPNFYQQHDYKILPPEALTWEIAEEYWPKVPAMQCMPVNSVVAVPNDDSTVSLPLSGE 299
Query: 311 MEVQGYAWS-GGGKAIVRVDVTIDQGRTW--HVANFTGQDSQAPLTRHWGWTLWRATIPV 367
+E++G+A G + RV+V++D G+TW ++ DS + W W LWRA + V
Sbjct: 300 LEIKGFAVPFGADGPVTRVEVSVDGGKTWVDTELDYGPHDSNKSKNK-WAWVLWRAAVKV 358
Query: 368 D 368
+
Sbjct: 359 E 359
>gi|255656450|ref|ZP_05401859.1| putative poly(A) polymerase [Clostridium difficile QCD-23m63]
gi|296450104|ref|ZP_06891866.1| polyA polymerase [Clostridium difficile NAP08]
gi|296878485|ref|ZP_06902491.1| polyA polymerase [Clostridium difficile NAP07]
gi|296261112|gb|EFH07945.1| polyA polymerase [Clostridium difficile NAP08]
gi|296430569|gb|EFH16410.1| polyA polymerase [Clostridium difficile NAP07]
Length = 445
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D FNG+ED++ VG+PV R +ED LR+LR RF A++
Sbjct: 113 RDFTINSIAYNSETGLVDPFNGYEDIQNKYIRCVGNPVDRFEEDALRMLRAVRFSAQLNF 172
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLK 743
N + E+ +I D + N+S ERI TE NKIL SK +LK
Sbjct: 173 NIDEGTEQ---SIHKKSDLIKNVSIERIQTEFNKILVSDSSKLNLLK 216
>gi|298242373|ref|ZP_06966180.1| Sulfite oxidase [Ktedonobacter racemifer DSM 44963]
gi|297555427|gb|EFH89291.1| Sulfite oxidase [Ktedonobacter racemifer DSM 44963]
Length = 362
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++ L ST+++Q DYK F P+ T D+ + ++E+ + + IC P + E
Sbjct: 207 EITLQSQPSTNYFQARDYKTFPPTVTAQTADWEQGKTLEEIALNAVICTPKSG-----ET 261
Query: 309 HQ---MEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATI 365
HQ + VQGYA +G + RV+++ D+G TW A + T W W W AT+
Sbjct: 262 HQAGPVLVQGYALTGEEAPVERVELSTDRGATWIPATIREK------TDRWAWCFWEATL 315
>gi|297846696|ref|XP_002891229.1| hypothetical protein ARALYDRAFT_891281 [Arabidopsis lyrata subsp.
lyrata]
gi|297337071|gb|EFH67488.1| hypothetical protein ARALYDRAFT_891281 [Arabidopsis lyrata subsp.
lyrata]
Length = 913
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES + + D + D + D + I EL + S I P +
Sbjct: 312 RIIVTTKESDNFYHFKDNRVLPSQVDAELADEEGWWYKPEYIINELNINSVITTPCHEEI 371
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK + RV+VT+D G TW+V Q+ + W W
Sbjct: 372 LPINAFTTQRPYTLKGYAYSGGGKKVTRVEVTVDGGETWNVCELDHQEKPNKYGKFWCWC 431
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ D N P++M
Sbjct: 432 FW---------SLEVEVLDLLSAKEIAVRAWDETLNTQPEKM 464
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWA 75
+T YS+S+++ H S W++ +YD T F+ HPGG I++ A E F A
Sbjct: 536 TTAKMYSMSEVKKHNS-ADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEA 594
Query: 76 MYGVHLQDEVFELLESYRIGNI 97
++ D+ ++LE YRIG +
Sbjct: 595 IH----SDKAKKMLEDYRIGEL 612
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK KG WG A V + W G L DVL+ GI
Sbjct: 186 VCAGNRRKEQNMVKKSKGFNWGSAGVSTSVWRGVPLCDVLRRCGI 230
>gi|420156000|ref|ZP_14662850.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Clostridium sp. MSTE9]
gi|394758199|gb|EJF41131.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Clostridium sp. MSTE9]
Length = 447
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D F G EDL++ + VGDP R +ED LRILR RF A +
Sbjct: 114 RDFTINAMAYSEQNGLIDCFGGQEDLRQKILRCVGDPDHRFEEDALRILRGLRFCAVLGF 173
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMM 741
+P+ + ++ + LD NI+ ERI TEL K+L G + +++
Sbjct: 174 HPDEKTAQSMNTHRELLD---NIAKERISTELVKLLCGQNAAQIL 215
>gi|149185903|ref|ZP_01864218.1| tRNA nucleotidyltransferase [Erythrobacter sp. SD-21]
gi|148830464|gb|EDL48900.1| tRNA nucleotidyltransferase [Erythrobacter sp. SD-21]
Length = 391
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 652 VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKN 711
+ D+F G DL++G F+G+ RI+ED+LRILRYFRF AR + + EE ++A ++
Sbjct: 134 IEDFFGGVADLERGHVRFIGEAEERIREDHLRILRYFRFQARFGDALD---EEAVNACRD 190
Query: 712 NLDGLHNISGERIWTELNKILG 733
L +S ER+ EL IL
Sbjct: 191 LAHTLKGLSRERVAMELLAILA 212
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV++DGR A V F ++WK DA+RRD T+N+++
Sbjct: 89 ITTLRRDVSSDGRRATVAFAQEWKDDASRRDFTINALY 126
>gi|284447539|gb|ADB88843.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284447559|gb|ADB88853.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284447633|gb|ADB88889.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 130
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 286 IQELPVISAICLPVADAKLKLE---NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
I +L + SA+ P D LKL + + ++GYA+SGGG+ ++R +++ D G+ WH+A
Sbjct: 11 INDLNINSAMVYPQHDEVLKLNGKSDQKYTLKGYAYSGGGRKVIRSEISYDGGKAWHLAK 70
Query: 343 FTGQDSQAPLTRHWGWTLWRATIPVDP--KTKEVSI--MDMLMGKKPHDIDF 390
T ++ +HW W W I V +E+S+ D M +P DI +
Sbjct: 71 LTHPETPNAYGKHWCWCFWELEINVLDLVGIEEISLRSWDEGMNTQPKDITW 122
>gi|421186312|ref|ZP_15643705.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB418]
gi|399967265|gb|EJO01747.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB418]
Length = 399
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G ++DYF+G +DLKK + VGD R ED LRILR FRF +++ +EE L A
Sbjct: 128 EGELFDYFSGLDDLKKKIIRTVGDAKQRFSEDALRILRAFRFSSQL---DFKIEEETLRA 184
Query: 709 IKNNLDGLHNISGERIWTELNKILGG 734
+ + L++I+ ERI+ E +K+L G
Sbjct: 185 SQMIKENLNDIAIERIFVEFSKLLAG 210
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEV 433
S+ D ++ + HD+D T+A P++MK +F N GEKHGT +N K+ +EV
Sbjct: 32 SVRDAILRRPIHDVDITTDALPNEMKRIFKTAD----NYAGEKHGTDLVFLNGKK-YEV 85
>gi|357489065|ref|XP_003614820.1| Nitrate reductase [Medicago truncatula]
gi|317135446|gb|ADV03139.1| nitrate reductase 2 [Medicago truncatula]
gi|355516155|gb|AES97778.1| Nitrate reductase [Medicago truncatula]
Length = 884
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ E H+ D + D + + + I EL + S I P D
Sbjct: 291 RIVVTTDECDGHYHYKDNRVLPSHVDAEQANEEGWWYKPEYIINELNINSVITTPCHDEI 350
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GY++SGGG+ + RV+VT+D G TWHV + ++W W
Sbjct: 351 LPINSWTTQRPYTLKGYSYSGGGRKVTRVEVTMDGGETWHVCTLDHPEKPTKYGKYWCWC 410
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ D A N P+ +
Sbjct: 411 FW---------SLEVEVLDLLGTKEIAVRAWDEALNTQPENL 443
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YSLS+++ HK L S+ W++ VYD T F++ HPGG I++ A + F A++
Sbjct: 520 YSLSEVKKHKTLDSA-WIIVHGNVYDCTRFLKDHPGGSDSILINAGTDCTDEFEAIH--- 575
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE YRIG +
Sbjct: 576 -SDKAKKLLEDYRIGEL 591
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 27/58 (46%)
Query: 408 VRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VR F + VCA KE VK G WG AAV N+ W G L VLK GI
Sbjct: 155 VREFPSRELPVTLVCAGNRRKEQNMVKQSVGFNWGAAAVSNSVWRGVSLHHVLKRCGI 212
>gi|255261768|ref|ZP_05341110.1| poly A polymerase family protein [Thalassiobium sp. R2A62]
gi|255104103|gb|EET46777.1| poly A polymerase family protein [Thalassiobium sp. R2A62]
Length = 383
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVL 706
R G V D G DL F+ + RIQED+LR LR+FRF A + + E +
Sbjct: 129 RATGEVVDPLGGLLDLYARRLRFIENADQRIQEDFLRSLRFFRFHALYADQTLGFEPEAI 188
Query: 707 SAIKNNLDGLHNISGERIWTELNKILGGS 735
+AI NLDGL + ERI E+ K+L +
Sbjct: 189 AAISGNLDGLETLPKERIGAEMVKLLAAT 217
>gi|296126066|ref|YP_003633318.1| polynucleotide adenylyltransferase [Brachyspira murdochii DSM
12563]
gi|296017882|gb|ADG71119.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Brachyspira murdochii DSM 12563]
Length = 464
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 626 IGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRIL 685
I ++ P R LT++ + LDGT+ D F+G +D+K+ + VGDP R +ED LRI+
Sbjct: 108 IEDDLPRRDLTINAMAYNV---LDGTLIDMFDGMKDIKRKIVKSVGDPYERFREDGLRIM 164
Query: 686 RYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
R RF A++ ++E AI ++ L +I+ ERI E N IL S
Sbjct: 165 RAIRFAAKLNFEI---EKETFEAITHSTGMLASIAAERIREEFNGILLSS 211
>gi|452963276|gb|EME68353.1| tRNA nucleotidyltransferase/poly(A) polymerase [Magnetospirillum
sp. SO-1]
Length = 435
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G VYD F+G D+ G FVG+P RI+ED LR+LR+FRF A + L+A
Sbjct: 145 EGNVYDPFDGIADMAAGRVRFVGEPEKRIEEDALRLLRFFRFHAHYGRG-IAMETRALNA 203
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ L +SGER+ EL ++L +L M +L
Sbjct: 204 CRRMAGRLEGLSGERVAGELVRLLLADDPTPSLLVMHSHGIL 245
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 32/37 (86%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR+DV + GRHA +++T+DW+ DA+RRD T+N++
Sbjct: 104 ITTLRVDVESFGRHARIEYTDDWRADASRRDFTMNAL 140
>gi|452000042|gb|EMD92504.1| hypothetical protein COCHEDRAFT_1135163 [Cochliobolus
heterostrophus C5]
Length = 374
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 256 ESTSHWQQNDYKGFSPSTDWDTVD---FAKSPAIQELPVISAICLPVADAKLKLENH-QM 311
ES +++QQ DYK P D + K +I+E+PV S + +P + ++ + +
Sbjct: 210 ESQNYYQQKDYKILPPEADCKEKAAEWWGKVSSIEEMPVNSVVGVPKSGTTVQRDAEGTI 269
Query: 312 EVQGYAW-SGGGKAIVRVDVTIDQGRTWHVA----NFTGQDSQAPLTRHWGWTLWRATIP 366
EV+GYA SG IV+V+V++D G++W A + G+D++ + W W LW+A +
Sbjct: 270 EVKGYALPSGADGPIVKVEVSVDDGQSWEEAELINEYEGEDTKN-VELKWAWALWKARVK 328
Query: 367 VD 368
+D
Sbjct: 329 ID 330
>gi|284447523|gb|ADB88835.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284447537|gb|ADB88842.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284447547|gb|ADB88847.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284447549|gb|ADB88848.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 130
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 286 IQELPVISAICLPVADAKLKLE---NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
I +L + SA+ P D LKL + + ++GYA+SGGG+ ++R +++ D G+ WH+A
Sbjct: 11 INDLNINSAMVYPQHDEVLKLNGKSDQKYTLKGYAYSGGGRKVIRSEISYDGGKAWHLAK 70
Query: 343 FTGQDSQAPLTRHWGWTLWRATIPVDP--KTKEVSI--MDMLMGKKPHDIDF 390
T ++ +HW W W I V +E+S+ D M +P DI +
Sbjct: 71 LTHPETPNAYGKHWCWCFWELEINVLDLVGIEEISLRSWDEGMNTQPKDITW 122
>gi|398382725|ref|ZP_10540806.1| tRNA nucleotidyltransferase/poly(A) polymerase [Sphingobium sp.
AP49]
gi|397726125|gb|EJK86566.1| tRNA nucleotidyltransferase/poly(A) polymerase [Sphingobium sp.
AP49]
Length = 403
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
L G + DYF G DL F+GD +RI ED+LRILRYFRF AR +N +
Sbjct: 133 LTGAISDYFGGVADLDARHLRFIGDANARIAEDHLRILRYFRFLARYGDNEVDTVAYAAC 192
Query: 708 AIKNNLDGLHNISGERIWTELNKIL 732
N L +S ERI EL K+L
Sbjct: 193 VAAAN--SLMALSRERIADELLKLL 215
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGR A + +T+DW+ DA RRD T N+++
Sbjct: 92 ITTLRRDVSTDGRRATIAYTDDWQQDAARRDFTFNALY 129
>gi|391348297|ref|XP_003748384.1| PREDICTED: cytochrome b5-like isoform 1 [Metaseiulus occidentalis]
gi|391348299|ref|XP_003748385.1| PREDICTED: cytochrome b5-like isoform 2 [Metaseiulus occidentalis]
gi|391348301|ref|XP_003748386.1| PREDICTED: cytochrome b5-like isoform 3 [Metaseiulus occidentalis]
Length = 131
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPFWAMYGVHLQ 82
YSL D+ H + KSS W+V +G+YD+T+F++ HPGGE ++ GG E V
Sbjct: 4 YSLEDVAKHNE-KSSCWLVIHEGIYDVTKFMEEHPGGEEVLLEQGGR-ESTEVFEDVGHS 61
Query: 83 DEVFELLESYRIGNISQEDSKLAAKDIASDPYVMEPVRS 121
+ EL+ Y+IG + ED K K +A EP +S
Sbjct: 62 TDARELMAKYKIGELCDED-KAKIKKVAEKSKFPEPSQS 99
>gi|342217118|ref|ZP_08709765.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341588008|gb|EGS31408.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 441
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 606 EGTVTAKVLSYRNRREKED-----RIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHE 660
E T + L+Y++ R E+ + ++ R T++ K+R G V+D F+G E
Sbjct: 78 EITTFRQDLAYKDHRHPEEVRFTPSLLDDLKRRDFTMNAMAKNRQ----GEVFDPFHGRE 133
Query: 661 DLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNIS 720
DL +G+ VGDP R++ED LRILR FRF +R N + + L A +GL +S
Sbjct: 134 DLDRGILRMVGDPKDRLEEDALRILRGFRFASRFKLNLD---PDFLDAASLYKEGLTQVS 190
Query: 721 GERIWTELNKIL 732
+RI E +L
Sbjct: 191 RDRIRQEFFGLL 202
>gi|327355252|gb|EGE84109.1| sulfite oxidase [Ajellomyces dermatitidis ATCC 18188]
Length = 401
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLE-N 308
+ + HES + +QQ+DYK P + + PA+Q +PV S + +P D ++ +
Sbjct: 238 ISVGPHESPNFYQQHDYKILPPRGH--HLGNRRVPAMQCMPVNSVVAVPGDDETVRRPPS 295
Query: 309 HQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFT-GQDSQAPLTRHWGWTLWRATIP 366
++EV+G+A G + + RV+V+ D G+TW A G +S W W LWRA +P
Sbjct: 296 GKLEVKGFAVPHGAEGPVTRVEVSADGGKTWVDAELNHGAESFNKGGSKWAWVLWRAEVP 355
Query: 367 VDPKTKEVSI 376
V+ K + ++I
Sbjct: 356 VE-KGRNLTI 364
>gi|118586879|ref|ZP_01544313.1| polynucleotide adenylyltransferase [Oenococcus oeni ATCC BAA-1163]
gi|118432711|gb|EAV39443.1| polynucleotide adenylyltransferase [Oenococcus oeni ATCC BAA-1163]
Length = 399
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G ++DYF+G DLKK + VGD R ED LRILR FRF +++ +EE L A
Sbjct: 128 EGELFDYFSGLNDLKKKIIRTVGDAKQRFSEDALRILRAFRFSSQL---DFKIEEETLRA 184
Query: 709 IKNNLDGLHNISGERIWTELNKILGG 734
+ + L++I+ ERI+ E +K+L G
Sbjct: 185 SQMIKENLNDIATERIFVEFSKLLAG 210
Score = 40.8 bits (94), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEV 433
S+ D ++ + HD+D T+A P++MK +F N GEKHGT +N K+ +EV
Sbjct: 32 SVRDAILRRPIHDVDITTDALPNEMKRIFKTAD----NYAGEKHGTDLVFLNGKK-YEV 85
>gi|157932108|gb|ABW05098.1| nitrate reductase [Beta vulgaris]
gi|177540045|gb|ACB73000.1| nitrate reductase [Beta vulgaris]
Length = 905
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES +++ D + D + + + I EL + S I P +
Sbjct: 309 RIIVTTSESDNYYHFKDNRVLPSHVDAELANTEAWWYKPEFIINELNINSVITTPCHEEI 368
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGG+ + RV++T+D G TWHV Q+ + ++W W
Sbjct: 369 LPINAWTTQRPYTIRGYAYSGGGRKVTRVELTLDGGETWHVCELDIQEKPSKYGKYWCWC 428
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 429 FW---------SLEVEVLDLLGAKE 444
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H +S+ W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 536 YSMSEVKKHNSAESA-WIVVHGHVYDATRFLKDHPGGSDSILINAGTDCTEEFDAIH--- 591
Query: 81 LQDEVFELLESYRIGNI 97
D+ LLE +R+G I
Sbjct: 592 -SDKAKRLLEDFRVGEI 607
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK G WG AAV + W G L DVLK GI
Sbjct: 186 VCAGNRRKEQNMVKQSIGFNWGSAAVSTSVWRGVPLRDVLKRCGI 230
>gi|116491042|ref|YP_810586.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
PSU-1]
gi|421189704|ref|ZP_15647018.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB422]
gi|421190838|ref|ZP_15648122.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB548]
gi|116091767|gb|ABJ56921.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
PSU-1]
gi|399972794|gb|EJO06993.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB422]
gi|399973534|gb|EJO07699.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB548]
Length = 399
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G ++DYF+G DLKK + VGD R ED LRILR FRF +++ +EE L A
Sbjct: 128 EGKLFDYFSGLNDLKKKIIRTVGDAKQRFSEDALRILRAFRFSSQL---DFKIEEETLRA 184
Query: 709 IKNNLDGLHNISGERIWTELNKILGG 734
+ + L++I+ ERI+ E +K+L G
Sbjct: 185 SQMIKENLNDIATERIFVEFSKLLAG 210
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEV 433
S+ D ++ + HD+D T+A P++MK +F N GEKHGT +N K+ +EV
Sbjct: 32 SVRDAILRRPIHDVDITTDALPNEMKRIFKTAD----NYAGEKHGTDLVFLNGKK-YEV 85
>gi|117188445|gb|ABK32637.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|117188451|gb|ABK32640.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 130
Score = 65.1 bits (157), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 288 ELPVISAICLPVADAKLKLENH---QMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFT 344
EL + SA+ P D L + + EV GYA++GGG+AI R +V+ DQGR WH+A
Sbjct: 13 ELNINSAMAKPNHDETLNIAQNIHKTYEVAGYAYTGGGRAITRAEVSTDQGRHWHLAKLY 72
Query: 345 GQDSQAPLTRHWGWTLWRATIPV 367
Q+ +W W W +PV
Sbjct: 73 RQERPTEYGMYWCWIWWAYDLPV 95
>gi|170747035|ref|YP_001753295.1| polynucleotide adenylyltransferase [Methylobacterium radiotolerans
JCM 2831]
gi|170653557|gb|ACB22612.1| Polynucleotide adenylyltransferase region [Methylobacterium
radiotolerans JCM 2831]
Length = 412
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S DG+++D G DL G F+GDP +RI+ED LRILR+FRF AR +
Sbjct: 133 SLGADGSLHDPVGGRPDLAAGRVRFIGDPATRIREDALRILRFFRFHARFGAGAPDAAAL 192
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L +S ER+ E K+L ++ + LL
Sbjct: 193 AACVAAR--DSLDRLSRERVRAEFLKLLAAPGGPALVTTLSATGLL 236
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLR DV TDGRHA V+F D+ DA RRD TVN++ LG
Sbjct: 96 VTTLREDVETDGRHAVVRFGTDFLRDAERRDFTVNALSLG 135
>gi|169827541|ref|YP_001697699.1| CCA-adding enzyme [Lysinibacillus sphaericus C3-41]
gi|168992029|gb|ACA39569.1| CCA-adding enzyme [Lysinibacillus sphaericus C3-41]
Length = 392
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 89/191 (46%), Gaps = 24/191 (12%)
Query: 552 LLTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTA 611
LL RP + V + P+ E S F +R I +HG L I G V
Sbjct: 35 LLNRPAHDVDVATNALPE--------EVKSVF----QRTVDIGIQHGTVLVIVPAGPV-- 80
Query: 612 KVLSYRNRREKED--RIGENQPFRKLTLSVQDKDRSF-----RLDGTVYDYFNGHEDLKK 664
+V +YR E D R + Q R L +Q +D + R DGT DY+ G +D++
Sbjct: 81 EVTTYRTDGEYTDHRRPDKVQFVRSLQDDLQRRDFTMNAIAMRHDGTFVDYYGGRQDIEL 140
Query: 665 GVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERI 724
V VGD R ED LR+LR RF A++ ++ ++AI+N + I+ ERI
Sbjct: 141 RVIRAVGDADKRFAEDALRMLRAIRFSAQL---DFTIAKDTMTAIQNRAPDIAFIAKERI 197
Query: 725 WTELNKILGGS 735
EL+K+ G+
Sbjct: 198 KAELDKLWLGT 208
>gi|28210893|ref|NP_781837.1| poly(A) polymerase [Clostridium tetani E88]
gi|28203332|gb|AAO35774.1| poly(A) polymerase [Clostridium tetani E88]
Length = 451
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y DY+NG EDLK + VGDP+ R ED LR++R RF A++
Sbjct: 121 RDFTVNAMAYNHKKGLADYYNGREDLKNKIIKSVGDPLKRFSEDALRMIRGVRFSAQLDF 180
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGS 735
N + +E + + +N + N+S ERI E NKIL S
Sbjct: 181 NIEENTKEAIKKLSSN---IKNVSVERIREEFNKILLSS 216
>gi|929750|emb|CAA29497.1| unnamed protein product [Nicotiana tabacum]
Length = 554
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + P D + + + I EL + S I P +
Sbjct: 135 RIIVTTQESDSYYHFKDNRVLPPHVDAELANTEAWWYKPEYIINELNINSVITTPCHEEI 194
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GY++SGGGK + RV+VT+D G TW V+ + ++W W
Sbjct: 195 LPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTLDGGETWQVSTLDHPEKPTKYGKYWCWC 254
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 255 FW---------SLEVEVLDLLSAKE 270
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 364 YSMSEVRKHSSADSA-WIIVHGHIYDATRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 419
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 420 -SDKAKKLLEDFRIGEL 435
>gi|326475520|gb|EGD99529.1| sulfite oxidase [Trichophyton tonsurans CBS 112818]
gi|326483119|gb|EGE07129.1| sulfite oxidase [Trichophyton equinum CBS 127.97]
Length = 411
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLK 305
++ + ES + +QQ+DYK P +T W+ + ++ P+IQE+PV S + P +K
Sbjct: 247 RITVQADESPNFYQQHDYKVLPPEATTWEIAERYWSTVPSIQEMPVNSVVACPDDGETVK 306
Query: 306 L-ENHQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
L + +EV+GYA G + +VRV+V+ D G +W A Q+ W W LW+A
Sbjct: 307 LGSDGCIEVKGYAVPTGSQGPVVRVEVSTDGGESWVDAELQDDKPQS----KWTWALWKA 362
Query: 364 TI 365
+
Sbjct: 363 RV 364
>gi|302781414|ref|XP_002972481.1| hypothetical protein SELMODRAFT_231924 [Selaginella moellendorffii]
gi|300159948|gb|EFJ26567.1| hypothetical protein SELMODRAFT_231924 [Selaginella moellendorffii]
Length = 904
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD---FAKSP--AIQELPVISAICLPVADAK 303
K+ ++ EST+++ D K D D + K P I EL + S I P
Sbjct: 286 KIEVTAAESTNYYHYQDNKVLPSHVDSDIASAEGWWKRPEYVINELNINSVITTPAHGDS 345
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++ + GYA+SGGG+ ++RV+VT+D G TW +A+ T + +HW W+
Sbjct: 346 LPINPVSIQSPYKMSGYAYSGGGRKVIRVEVTLDGGETWALADLTHPERPTKYGKHWCWS 405
Query: 360 LW 361
W
Sbjct: 406 FW 407
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 24 SLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVHL 81
++S+++ H S W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 523 TMSEVRKHSK-PDSPWIVVNSSVYDCTSFLKDHPGGADSILINAGTDCTEEFEAIHSARA 581
Query: 82 QDEVFELLESYRIGNISQEDSKLAAKDIASD 112
+ LLE Y+IG + ++ D + +
Sbjct: 582 K----ALLEDYKIGELVSTAGSFSSADTSPE 608
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 23/44 (52%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
VCA KE V+ G WG A V + W GA L DVLKA G
Sbjct: 165 VCAGNRRKEQNMVRQSVGFNWGAAGVSTSVWKGALLRDVLKACG 208
>gi|290890522|ref|ZP_06553597.1| hypothetical protein AWRIB429_0987 [Oenococcus oeni AWRIB429]
gi|419758811|ref|ZP_14285123.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB304]
gi|419857719|ref|ZP_14380423.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB202]
gi|421185440|ref|ZP_15642851.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB318]
gi|421195314|ref|ZP_15652523.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB568]
gi|421197427|ref|ZP_15654602.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB576]
gi|290479918|gb|EFD88567.1| hypothetical protein AWRIB429_0987 [Oenococcus oeni AWRIB429]
gi|399904266|gb|EJN91722.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB304]
gi|399964621|gb|EJN99262.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB318]
gi|399975036|gb|EJO09104.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB576]
gi|399976020|gb|EJO10049.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB568]
gi|410497496|gb|EKP88969.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB202]
Length = 399
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G ++DYF+G DLKK + VGD R ED LRILR FRF +++ +EE L A
Sbjct: 128 EGELFDYFSGLNDLKKKIIRTVGDAKQRFSEDALRILRAFRFSSQL---DFKIEEETLRA 184
Query: 709 IKNNLDGLHNISGERIWTELNKILGG 734
+ + L++I+ ERI+ E +K+L G
Sbjct: 185 SQMIKENLNDIATERIFVEFSKLLAG 210
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEV 433
S+ D ++ + HD+D T+A P++MK +F N GEKHGT +N K+ +EV
Sbjct: 32 SVRDAILRRPIHDVDITTDALPNEMKRIFKTAD----NYAGEKHGTDLVFLNGKK-YEV 85
>gi|419859508|ref|ZP_14382162.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni DSM
20252 = AWRIB129]
gi|421188919|ref|ZP_15646251.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB419]
gi|421193646|ref|ZP_15650892.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB553]
gi|399964252|gb|EJN98906.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB419]
gi|399971805|gb|EJO06044.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni
AWRIB553]
gi|410496525|gb|EKP88008.1| tRNA nucleotidyltransferase/poly(A) polymerase [Oenococcus oeni DSM
20252 = AWRIB129]
Length = 399
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G ++DYF+G DLKK + VGD R ED LRILR FRF +++ +EE L A
Sbjct: 128 EGELFDYFSGLNDLKKKIIRTVGDAKQRFSEDALRILRAFRFSSQL---DFKIEEETLRA 184
Query: 709 IKNNLDGLHNISGERIWTELNKILGG 734
+ + L++I+ ERI+ E +K+L G
Sbjct: 185 SQMIKENLNDIATERIFVEFSKLLAG 210
Score = 40.8 bits (94), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEV 433
S+ D ++ + HD+D T+A P++MK +F N GEKHGT +N K+ +EV
Sbjct: 32 SVRDAILRRPIHDVDITTDALPNEMKRIFKTAD----NYAGEKHGTDLVFLNGKK-YEV 85
>gi|1113861|gb|AAC49459.1| nitrate reductase [Chlorella vulgaris]
gi|1113863|gb|AAC49460.1| nitrate reductase [Chlorella vulgaris]
Length = 877
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 275 WDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQ 334
W DF I +L V SAI P + + L V+GYA+ G G I+R +V++D
Sbjct: 321 WYKPDFI----INDLNVQSAIGYPAHEEVVPLAAGTYAVRGYAYCGNGNKIIRCEVSLDD 376
Query: 335 GRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
G++W + + T + +HWGW W +P+
Sbjct: 377 GKSWRLGSVTHEGQPTEYGKHWGWVWWSLEVPI 409
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++++++ H ++S+ W V VYD T F++ HPGG I++ A + + F A++ +
Sbjct: 505 FTMAEVETHTTMESA-WFVVDGKVYDATPFLKDHPGGADSILLVAGTDATDEFNAIHSLK 563
Query: 81 LQDEVFELLESYRIGNISQE 100
+ ++ E Y IG +++E
Sbjct: 564 AKKQLLE----YYIGELAEE 579
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
CA KE VK G WG + G +TWTG R+ D+L+ G+
Sbjct: 162 TCAGNRRKEENMVKQTIGFNWGPSGTGCSTWTGVRVSDLLQRCGM 206
>gi|402849828|ref|ZP_10898051.1| tRNA nucleotidyltransferase [Rhodovulum sp. PH10]
gi|402499890|gb|EJW11579.1| tRNA nucleotidyltransferase [Rhodovulum sp. PH10]
Length = 448
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V+D G DL F+G P RI ED+LRILRYFRF A N + E L+A
Sbjct: 136 DGVVHDPLGGFPDLIARKVRFIGAPARRIAEDFLRILRYFRFHASYGN--GDFDRESLAA 193
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
+ L +S ER+ EL K+L
Sbjct: 194 CVAARETLRALSRERVRMELMKLL 217
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLR DV T GR A+V F DW+ DA RRD T+N++ +G
Sbjct: 95 VTTLRRDVETFGRKAKVAFGRDWRADAERRDFTMNALSVG 134
>gi|449542989|gb|EMD33966.1| hypothetical protein CERSUDRAFT_117488 [Ceriporiopsis subvermispora
B]
Length = 365
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVD---FAKSPAIQELPVISAICLPVADAKLKL 306
+ +S ES + +QQ DYK P + + K P+I LPV S + + +
Sbjct: 216 ITVSSEESPNFYQQLDYKILPPEVETKAQAAPLWVKYPSITTLPVNSIVA-----STTRT 270
Query: 307 ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
+ V+GYA SGG IVRV+V+ID G TW A T Q+ + W WTLW A
Sbjct: 271 SPTSVRVKGYAISGGDNKIVRVEVSIDDGTTWRDAQITYQEGK------WSWTLWEA 321
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 422 CARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGIS 466
CA KE EVKPV G+ W + N W GARL DVL++ ++
Sbjct: 96 CAGNRRKEMNEVKPVHGILWDDGVICNTRWAGARLRDVLQSVDVN 140
>gi|365878702|ref|ZP_09418165.1| putative poly(A) polymerase [Bradyrhizobium sp. ORS 375]
gi|365293412|emb|CCD90696.1| putative poly(A) polymerase [Bradyrhizobium sp. ORS 375]
Length = 417
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG ++D+ G D++ F+GDP RI EDYLRILR+FR A + + +E L+
Sbjct: 134 DGVIHDHVGGLADIEARRVRFIGDPAQRIAEDYLRILRFFRIHAAFGHGEPD-REGYLAC 192
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
I GL +S ER+ E+ K+L
Sbjct: 193 IAGR-GGLATLSAERVRMEMLKLL 215
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLR D T GR A+V F DW DA+RRD T+N++ +G
Sbjct: 93 VTTLREDTETFGRKAKVAFARDWVGDAHRRDFTINALSVG 132
>gi|317135444|gb|ADV03138.1| nitrate reductase 1 [Medicago truncatula]
Length = 902
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ +S +++ ND + D + + + I EL V S I P D
Sbjct: 299 RIIVTSKQSDNYYHYNDNRVLPSHVDAELANAEGWWYKPEYIINELNVNSVITSPCHDEI 358
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGG+ + RV+VT+D G TW V + ++W W
Sbjct: 359 LPINSCTTQMPYLLRGYAYSGGGRKVTRVEVTMDGGETWQVCTLDHSEKPNKYGKYWCWC 418
Query: 360 LWRATIPVDPKTKEVSIMDMLMGK 383
W + EV ++D+L K
Sbjct: 419 FW---------SLEVEVLDLLGAK 433
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
Y++S+++ H + +S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 528 YTISEVEKHNNAESA-WIIVHGHVYDCTRFIKDHPGGADSILINAGTDCTEEFEAIH--- 583
Query: 81 LQDEVFELLESYRIGNI 97
D+ +++E YRIG +
Sbjct: 584 -SDKAKKIIEQYRIGEL 599
>gi|209966674|ref|YP_002299589.1| polyA polymerase family protein [Rhodospirillum centenum SW]
gi|209960140|gb|ACJ00777.1| polyA polymerase family protein [Rhodospirillum centenum SW]
Length = 424
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S +G +YD F G DL G FVGD +RI+ED LRILRYFRF AR +
Sbjct: 131 SLSSEGDLYDPFGGLADLSAGRVRFVGDAEARIREDVLRILRYFRFHARFGKGGLDDDAI 190
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGSFSKE----MMLKMLYQNLL 750
A + L L +SGER+ EL ++ + E M+ + + Q+LL
Sbjct: 191 AACAAQAPL--LPTLSGERVREELLRLFATDRAVETWRLMLERGIIQHLL 238
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR DV T GRHA V+FT+DW DA RRD T N++ L
Sbjct: 94 ITTLRRDVETYGRHARVEFTDDWLEDARRRDFTFNALSL 132
>gi|146150662|gb|ABP97095.1| nitrate reductase [Chlorella vulgaris]
Length = 877
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 275 WDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQ 334
W DF I +L V SAI P + + L V+GYA+ G G I+R +V++D
Sbjct: 321 WYKPDFI----INDLNVQSAIGYPAHEEVVPLAAGTYAVRGYAYCGNGNKIIRCEVSLDD 376
Query: 335 GRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
G++W + + T + +HWGW W +P+
Sbjct: 377 GKSWRLGSVTHEGQPTEYGKHWGWVWWSLEVPI 409
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++++++ H ++S+ W V VYD T F++ HPGG I++ A + + F A++ +
Sbjct: 505 FTMAEVEQHTTMESA-WFVVDGKVYDATPFLKDHPGGADSILLVAGTDATDEFNAIHSLK 563
Query: 81 LQDEVFELLESYRIGNISQE 100
+ ++ E Y IG +++E
Sbjct: 564 AKKQLLE----YYIGELAEE 579
Score = 41.2 bits (95), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI-SPDQSLDSADVQHV 479
CA KE VK G WG + G +TWTG R+ D+L+ G+ +P + +
Sbjct: 162 TCAGNRRKEENMVKQTIGFNWGPSGTGCSTWTGVRVSDLLQRCGMKTPKEGARHVCFRGP 221
Query: 480 HVEIWSKAVDSSYNT 494
E+ K D SY T
Sbjct: 222 KGEL-PKGDDGSYGT 235
>gi|167644663|ref|YP_001682326.1| polynucleotide adenylyltransferase [Caulobacter sp. K31]
gi|167347093|gb|ABZ69828.1| Polynucleotide adenylyltransferase region [Caulobacter sp. K31]
Length = 417
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYD-YFNGHEDLKKGVCAFVGDPVSRIQEDYL 682
D+ E + FR L V L G +YD G D ++G FVGDP++RI+EDYL
Sbjct: 118 DQDAERRDFRFNALYVD-------LQGRLYDPTGEGVNDAREGRVVFVGDPMTRIREDYL 170
Query: 683 RILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMML 742
RILR+FRF A + K L+A K + + ER EL K+L + +
Sbjct: 171 RILRFFRFHAWYGKGEADQK--ALAACKALKGMVEGRAAERTQKELLKLLAAEDPRPSLR 228
Query: 743 KMLYQNLLLFSKLKATTMREYIVELMKYK-----EKSELIKDFHKWRLPTF-PMNGNIIR 796
M ++L +++ ++ L +++ E +L ++ + RL P + I
Sbjct: 229 LMAATSVL-------SSILPFVKSLARFEGLMAIETEQLFENDPELRLAALIPDDPKIAE 281
Query: 797 QFFARICNNPNNHKEEVLSAIKKN 820
Q R+ N KE ++ A+ K+
Sbjct: 282 QMAERL-RLSNALKERLVEAVGKS 304
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 838 KILGGSFSKEMMLKMLE-INMFPHLGTDETFATLDFEGLFRSMPI-----PFTLLFSANF 891
+ +GG +M K ++ I++ L D+ L GL R++P T L
Sbjct: 34 RFVGGCVRNTLMGKPIDDIDIATTLTPDQVIEALGEAGL-RAIPTGVDHGTVTALSGGRP 92
Query: 892 FRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
+ ITTLR DV TDGR A V FT+DW DA RRD N++++ ++
Sbjct: 93 YE----ITTLRRDVETDGRRAVVSFTQDWDQDAERRDFRFNALYVDLQ 136
>gi|284448047|gb|ADB89092.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 133
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 286 IQELPVISAICLPVADAKLKLEN--HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I EL + SAI P L L+ E+ GYA+ GGG+ I+RV+VT+D G++WH+
Sbjct: 11 INELNINSAISSPGHGEVLYLDECGPTYEMTGYAYGGGGRKIIRVEVTLDGGKSWHLVE- 69
Query: 344 TGQDSQAPLT-----RHWGWTLWRATIP 366
G + P T ++WGW LW T+P
Sbjct: 70 DGNVTHPPGTPTAAGKYWGWCLWTITVP 97
>gi|1946812|gb|AAB52786.1| NADH nitrate reductase [Solanum tuberosum]
Length = 911
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ ES S++ D + P + + + + I EL + S I P +
Sbjct: 310 RIVVTTQESESYYHYKDNRVLPPHVELELANAEAWWYKPEYIINELNINSVITTPSHEEI 369
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GYA+ GGGK + RV+VT+D G TW V + ++W W
Sbjct: 370 LPINAWTTQRPYTLRGYAYPGGGKKVTRVEVTLDGGETWSVCTLDHPEKPTKYGKYWCWC 429
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ ID N P+++
Sbjct: 430 FW---------SLEVEVLDLLRAKEIAVRAIDETHNTQPEKL 462
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S W++ +YD + F++ HPGG I++ A E F A++
Sbjct: 539 YSMSEVRKHNS-SDSAWIIVHGHIYDASRFLKDHPGGVDSILINAGTDCTEEFDAIH--- 594
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 595 -SDKAKKLLEDFRIGEL 610
>gi|418935524|ref|ZP_13489294.1| Polynucleotide adenylyltransferase region [Rhizobium sp. PDO1-076]
gi|375057771|gb|EHS53925.1| Polynucleotide adenylyltransferase region [Rhizobium sp. PDO1-076]
Length = 252
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G D++ F+GD RI EDYLR+LR+FRFFA + + L A
Sbjct: 132 DGQVIDLVGGLADIETRTVRFIGDAEQRIAEDYLRVLRFFRFFAYYGHGRPDAAG--LKA 189
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ L +S ER+W+E+ K+L +L M +L
Sbjct: 190 CARAREKLKTLSAERVWSEMKKLLSARDPGRALLWMRQSGVL 231
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLR DV TDGR A+V F DW+ DA RRDLT+N ++ G
Sbjct: 91 VTTLRRDVETDGRRAQVAFGADWQEDAERRDLTINGLYAG 130
>gi|1673613|gb|AAB18985.1| NADH nitrate reductase [Solanum tuberosum]
Length = 911
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ ES S++ D + P + + + + I EL + S I P +
Sbjct: 310 RIVVTTQESESYYHYKDNRVLPPHVELELANAEAWWYKPEYIINELNINSVITTPSHEEI 369
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GYA+ GGGK + RV+VT+D G TW V + ++W W
Sbjct: 370 LPINAWTTQRPYTLRGYAYPGGGKKVTRVEVTLDGGETWSVCTLDHPEKPTKYGKYWCWC 429
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ ID N P+++
Sbjct: 430 FW---------SLEVEVLDLLRAKEIAVRAIDETHNTQPEKL 462
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S W++ +YD + F++ HPGG I++ A E F A++
Sbjct: 539 YSMSEVRKHNS-SDSAWIIVHGHIYDASRFLKDHPGGVDSILINAGTDCTEEFDAIH--- 594
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE +RIG +
Sbjct: 595 -SDKAKKLLEDFRIGEL 610
>gi|197701160|gb|ABJ91208.4| nitrate reductase [Chlorella vulgaris]
Length = 877
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 275 WDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQ 334
W DF I +L V SAI P + + L V+GYA+ G G I+R +V++D
Sbjct: 321 WYKPDFI----INDLNVQSAIGYPAHEEVVPLAAGTYAVRGYAYCGNGNKIIRCEVSLDD 376
Query: 335 GRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
G++W + + T + +HWGW W +P+
Sbjct: 377 GKSWRLGSVTHEGQPTEYGKHWGWVWWSLEVPI 409
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++++++ H ++S+ W V VYD T F++ HPGG I++ A + + F A++ +
Sbjct: 505 FTMAEVEQHTTMESA-WFVVDGKVYDATPFLKDHPGGADSILLVAGTDATDEFNAIHSLK 563
Query: 81 LQDEVFELLESYRIGNISQE 100
+ ++ E Y IG +++E
Sbjct: 564 AKKQLLE----YYIGELAEE 579
Score = 41.2 bits (95), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI-SPDQSLDSADVQHV 479
CA KE VK G WG + G +TWTG R+ D+L+ G+ +P + +
Sbjct: 162 TCAGNRRKEENMVKQTIGFNWGPSGTGCSTWTGVRVSDLLQRCGMKTPKEGARHVCFRGP 221
Query: 480 HVEIWSKAVDSSYNT 494
E+ K D SY T
Sbjct: 222 KGEL-PKGDDGSYGT 235
>gi|1762628|gb|AAB39553.1| nitrate reductase, partial [Agrostemma githago]
Length = 629
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D + + + I EL + S I P +
Sbjct: 29 RIIVAPVESDSYYHYRDNRVLPSHVDAELANSEAWWYKTEYIINELNINSVITTPCHEEI 88
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK + RV+VT+D G TW +A Q + ++W W
Sbjct: 89 LPINAWSTQRPYTLRGYAYSGGGKKVTRVEVTMDGGETWRIAELDIQQKGSKYGKYWCWC 148
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 149 FW---------SLEVEVLDLLGAKE 164
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+S+S+I+ H +S+ W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 258 FSMSEIKKHNSAESA-WIVVHGHVYDATRFLKDHPGGSDSILINAGTDCTEEFDAIH--- 313
Query: 81 LQDEVFELLESYRIGNI 97
D+ +++E +RIG +
Sbjct: 314 -SDKAKKMIEDFRIGEL 329
>gi|163761621|ref|ZP_02168692.1| poly(A) polymerase [Hoeflea phototrophica DFL-43]
gi|162281217|gb|EDQ31517.1| poly(A) polymerase [Hoeflea phototrophica DFL-43]
Length = 426
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D G ED++ F+G +R+ EDYLR+LRYFRF+A L A
Sbjct: 146 GEIIDLIGGLEDIESRTVRFIGAADARVAEDYLRVLRYFRFYA--GYGSGRPDAAALKAC 203
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
D L ++S ERIW EL + +L M +L
Sbjct: 204 TRARDRLSSLSAERIWKELKLLFAARDPGRALLWMRQTGVL 244
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 824 LHNISGERIWTELNKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIP 882
+ N GE I +++GG+ +M L + ++++ ++ A + EG+ R++P
Sbjct: 34 VFNQDGEEI-----RVVGGAVRNALMGLPVSDVDLATTWAPEQVVARAEAEGI-RAVPTG 87
Query: 883 F-----TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
TL+ F ITTLR D TDGR A+V F +DW++DA RRD T+N+++
Sbjct: 88 IDHGTVTLVIDGQGFE----ITTLRHDAETDGRRAKVNFGQDWQVDAERRDFTINALYAN 143
Query: 938 MK 939
K
Sbjct: 144 QK 145
>gi|116617867|ref|YP_818238.1| tRNA nucleotidyltransferase/poly(A) polymerase [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|122271932|sp|Q03Y57.1|CCA_LEUMM RecName: Full=CCA-adding enzyme; AltName: Full=CCA tRNA
nucleotidyltransferase; AltName: Full=tRNA
CCA-pyrophosphorylase; AltName: Full=tRNA
adenylyl-/cytidylyl- transferase; AltName: Full=tRNA
nucleotidyltransferase; AltName: Full=tRNA-NT
gi|116096714|gb|ABJ61865.1| tRNA nucleotidyltransferase/poly(A) polymerase [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 401
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
+ R DG V D F+G ED+KKGV VGD R ED LR++R RF A++ N ++
Sbjct: 124 AMRHDGEVLDLFDGLEDMKKGVIRAVGDAEKRFTEDALRMMRALRFSAQLGFNIEADTQK 183
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGS 735
L + N L I+ ER+ E K+L GS
Sbjct: 184 ALVDLAPN---LAKIAVERVRVEFEKLLLGS 211
>gi|115476826|ref|NP_001062009.1| Os08g0468700 [Oryza sativa Japonica Group]
gi|42407404|dbj|BAD09562.1| putative nitrate reductase apoenzyme [Oryza sativa Japonica Group]
gi|113623978|dbj|BAF23923.1| Os08g0468700 [Oryza sativa Japonica Group]
Length = 916
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES +++ D + F D + + + I EL V S I P D
Sbjct: 314 RIIVTTAESDNYYHYKDNRVFPSHVDAELANADAWWYKPEYIINELNVNSVITAPGHDEI 373
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK I RV+VT+D G TW V + +HW W
Sbjct: 374 LPINGITTQRGYTMKGYAYSGGGKRITRVEVTLDGGETWLVCVLDLPEKPTKYGKHWCWC 433
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 434 FW---------SVEVEVLDLLGAKE 449
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++S+++ H + S W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 544 FTMSEVRKHSS-QDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAIH--- 599
Query: 81 LQDEVFELLESYRIGNI-------SQEDSKLAAKDIASDPYVMEPVRSPLLKATS 128
D+ LL++YRIG + S ++S A +++ + E +++P A S
Sbjct: 600 -SDKAKALLDTYRIGELITTGAGYSSDNSVHGASNLSQLAPIREAIKAPAPVALS 653
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS 470
C+ KE V+ G +G AAV + W GARL DVL+ GI P +
Sbjct: 191 ACSGNRRKEQNMVQQTVGFNFGAAAVSTSVWHGARLRDVLRRCGIMPSKG 240
>gi|312281633|dbj|BAJ33682.1| unnamed protein product [Thellungiella halophila]
Length = 909
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES + + D + D + D + I EL + S I P +
Sbjct: 308 RIIVTTKESDNFYHFKDNRVLPSDVDAELADEEGWWYKPEYIINELNINSVITTPCHEEI 367
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK + RV+VT+D G TW+V Q+ + W W
Sbjct: 368 LPINAFTTQRPYTLKGYAYSGGGKKVTRVEVTMDGGETWNVCTLDHQEKPNKYGKFWCWC 427
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ D N P++M
Sbjct: 428 FW---------SLEVEVLDLLGAKEIAVRAWDETLNTQPEKM 460
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWA 75
+T YS+S+++ H S W++ +YD T+F++ HPGG I++ A E F A
Sbjct: 532 TTAKMYSMSEVKKHNS-ADSCWIIVHGHIYDCTKFLKDHPGGSDSILINAGMDCTEEFEA 590
Query: 76 MYGVHLQDEVFELLESYRIGNI 97
++ D+ ++LE YRIG +
Sbjct: 591 IH----SDKAKKMLEDYRIGEL 608
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK KG WG A V + W G L DVL+ GI
Sbjct: 182 VCAGNRRKEQNMVKKSKGFNWGSAGVSTSVWRGVPLCDVLRHCGI 226
>gi|220925023|ref|YP_002500325.1| polynucleotide adenylyltransferase [Methylobacterium nodulans ORS
2060]
gi|219949630|gb|ACL60022.1| Polynucleotide adenylyltransferase region [Methylobacterium
nodulans ORS 2060]
Length = 417
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++D G DL G F+G RI+EDYLR+LR+FRF AR + E L+A
Sbjct: 137 GRLHDTVGGAADLASGRVRFIGAAAQRIREDYLRVLRFFRFHARYGRGALD--PEGLAAS 194
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
+GL +S ER+ EL K+L
Sbjct: 195 IAAREGLATLSRERVRVELLKLL 217
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR D+ TDGRHA V+F D+ DA RRD T+N++
Sbjct: 95 VTTLREDIETDGRHAVVRFGRDFARDAERRDFTINAL 131
>gi|118591958|ref|ZP_01549353.1| poly(A) polymerase [Stappia aggregata IAM 12614]
gi|118435601|gb|EAV42247.1| poly(A) polymerase [Stappia aggregata IAM 12614]
Length = 414
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 633 RKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFA 692
R TL+ DR RL +D G +D F+GDP +RI+EDYLRILR+FR +A
Sbjct: 125 RDFTLNALYVDRHGRL----HDPLGGLDDCLNRHVRFIGDPDTRIREDYLRILRFFRIYA 180
Query: 693 RICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
+ + L A DGL ++S ERI E+ ++L
Sbjct: 181 --AYGAGDMDADGLGACLRQRDGLRHLSAERIGHEMRRLL 218
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR DV T GR A V F +W DA RRD T+N++++
Sbjct: 96 VTTLREDVETFGRQARVVFGRNWTRDAERRDFTLNALYV 134
>gi|410725512|ref|ZP_11363907.1| tRNA nucleotidyltransferase/poly(A) polymerase [Clostridium sp.
Maddingley MBC34-26]
gi|410601895|gb|EKQ56392.1| tRNA nucleotidyltransferase/poly(A) polymerase [Clostridium sp.
Maddingley MBC34-26]
Length = 442
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 28/190 (14%)
Query: 552 LLTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKR--LAGIFEKHGYQL---RIAGE 606
+L + P + K+ P+ +KL F LK + I K Y++ RI GE
Sbjct: 37 ILNKKPKDWDITTKAKPEDVIKL----FDKVVLTGLKHGTVTVIINKESYEVTTYRIDGE 92
Query: 607 GTVTAKVLSYRNRREKE----DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDL 662
NR KE + + E+ R T++ + DG + DYF G +DL
Sbjct: 93 YE--------DNRHPKEVKFVNSLKEDLSRRDFTINAMAYNER---DGLI-DYFEGMKDL 140
Query: 663 KKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGE 722
+K + VGDP R ED LR+LR RF A++ + + H +L +I + + NIS E
Sbjct: 141 EKKIIKTVGDPEKRFSEDALRMLRAIRFSAQLSFSIDEH---ILCSIGKLKNHIMNISKE 197
Query: 723 RIWTELNKIL 732
RI E NKIL
Sbjct: 198 RIREEFNKIL 207
>gi|389693968|ref|ZP_10182062.1| tRNA nucleotidyltransferase/poly(A) polymerase [Microvirga sp.
WSM3557]
gi|388587354|gb|EIM27647.1| tRNA nucleotidyltransferase/poly(A) polymerase [Microvirga sp.
WSM3557]
Length = 414
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S LDG ++DY G DL F+GD +RI+EDYLRI+R+FRF A + +
Sbjct: 131 SLSLDGRLHDYTGGMADLAARRVRFIGDAHTRIREDYLRIMRFFRFHAEYAQGDPDPEGL 190
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKIL 732
V S + GL +S ERI EL K++
Sbjct: 191 VASGAERQ--GLEILSKERIRHELLKLV 216
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 837 NKILGGSFSKEMMLK-MLEINMFPHLGTDETFATLDFEGLFRSMPI-----PFTLLFSAN 890
+I+GG+ ++ + + E++ L D A + G F+++P T++
Sbjct: 32 TRIVGGAVRNALLGRPVTEVDCTTTLLPDAIVARAEAAG-FKAVPTGIEHGTITVIVQGE 90
Query: 891 FFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGM 938
+ ITTLR DV T+GRHA V F D+ LDA RRD T+N++ L +
Sbjct: 91 PYE----ITTLREDVETNGRHAVVHFGRDFALDARRRDFTINALSLSL 134
>gi|295102217|emb|CBK99762.1| tRNA nucleotidyltransferase/poly(A) polymerase [Faecalibacterium
prausnitzii L2-6]
Length = 403
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D F G EDL +GV VG+P+ R +ED LRILR +RF AR
Sbjct: 114 RDFTINAMAYSAEEGLCDPFGGQEDLARGVVRAVGEPLRRFEEDALRILRLYRFAARFGF 173
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
+ E + +LD +S ERI ELNK+L
Sbjct: 174 VIDETTEAAAKQLAAHLD---CVSVERIEEELNKLL 206
>gi|269838464|ref|YP_003320692.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Sphaerobacter thermophilus DSM 20745]
gi|269787727|gb|ACZ39870.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Sphaerobacter thermophilus DSM 20745]
Length = 478
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DGTV+D F G +DL++ + VGDP +R ED LRILR RF A++ + L+A
Sbjct: 151 DGTVHDPFGGLDDLERRIIRAVGDPKARFAEDPLRILRAARFAAQLDFRVDRR---TLAA 207
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
++ L IS ERI ELN++L
Sbjct: 208 MRAMGPQLERISRERIAAELNRLL 231
>gi|302501857|ref|XP_003012920.1| hypothetical protein ARB_00802 [Arthroderma benhamiae CBS 112371]
gi|291176481|gb|EFE32280.1| hypothetical protein ARB_00802 [Arthroderma benhamiae CBS 112371]
Length = 386
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLK 305
++ + ES + +QQ+DYK P +T W+ + ++ P+IQE+PV S + P +K
Sbjct: 222 RITVQADESPNFYQQHDYKVLPPEATTWEIAENYWSTVPSIQEMPVNSVVACPDDGETVK 281
Query: 306 L-ENHQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
L + +EV+GYA G + +VRV+V+ D G +W A Q+ W W LW+A
Sbjct: 282 LSSDGCIEVKGYAVPTGSQGPVVRVEVSTDGGESWVDAELQDDKPQS----KWTWALWKA 337
Query: 364 TI 365
+
Sbjct: 338 RV 339
>gi|108805591|ref|YP_645528.1| polynucleotide adenylyltransferase [Rubrobacter xylanophilus DSM
9941]
gi|108766834|gb|ABG05716.1| Polynucleotide adenylyltransferase region [Rubrobacter xylanophilus
DSM 9941]
Length = 510
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 21/166 (12%)
Query: 585 PELKRLAGIFEKHGYQLRIAGE--GTVTAKVLSYR--------NRREKEDRIGENQPFRK 634
PE+KRL H + GE GT+ A V YR +R + DR E
Sbjct: 56 PEIKRL---LRPHAGYMWDVGERFGTIGAAVDGYRVEVTTYRSDRYAEGDRHPEVSFGES 112
Query: 635 LTLSVQDKDRSFR------LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYF 688
L + +D + L G + D F G DL+ G+ VGDP+ R++ED LR+LR
Sbjct: 113 LMGDLARRDFTINAVAADALSGGIIDPFEGRRDLELGIIRPVGDPLERMREDPLRMLRAV 172
Query: 689 RFFARICN--NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
RF A + P ++ AI+ N L +IS ERI E ++IL
Sbjct: 173 RFVATLSTPEKPFEMTADLERAIRENARWLESISAERIREEFDRIL 218
>gi|282882323|ref|ZP_06290953.1| tRNA adenylyltransferase [Peptoniphilus lacrimalis 315-B]
gi|281297830|gb|EFA90296.1| tRNA adenylyltransferase [Peptoniphilus lacrimalis 315-B]
Length = 445
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
D I ++ R T++ D+S+ +YD FNG DLK + GD RI+ED LR
Sbjct: 101 DSIDDDLARRDFTINAMAMDKSY----NIYDPFNGIRDLKNKIIRACGDANKRIEEDALR 156
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
ILR RF R + EE+ AI N + L NI+ ERI++E+ KI+
Sbjct: 157 ILRAIRFATRFKFYLD---EELFDAISLNRNLLKNIARERIFSEICKII 202
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 28/142 (19%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
+ D+L+G +P+D D TNA P Q+K +F E K+ + G K+GT+ D+ +E+
Sbjct: 25 CLRDILLGIRPNDFDITTNARPSQVKEVFREYKIFHY---GIKYGTITVEYRDRL-YEIT 80
Query: 435 PVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS--LDSA--DVQHVHVEIWSKAVDS 490
+ T++ R PD+ LDS D+ I + A+D
Sbjct: 81 TFR---------SEGTYSDNR----------RPDRVLFLDSIDDDLARRDFTINAMAMDK 121
Query: 491 SYNTQPESFANIWNLRGVLSNA 512
SYN + F I +L+ + A
Sbjct: 122 SYNIY-DPFNGIRDLKNKIIRA 142
>gi|327301229|ref|XP_003235307.1| sulfite oxidase [Trichophyton rubrum CBS 118892]
gi|326462659|gb|EGD88112.1| sulfite oxidase [Trichophyton rubrum CBS 118892]
Length = 411
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLK 305
++ + ES + +QQ+DYK P +T W+ + ++ P+IQE+PV S + P +K
Sbjct: 247 RITVQADESPNFYQQHDYKVLPPEATTWEISEKYWSTVPSIQEMPVNSVVACPDDGETVK 306
Query: 306 L-ENHQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
L + +EV+GYA G + +VRV+V+ D G +W A Q+ W W LW+A
Sbjct: 307 LSSDGCIEVKGYAVPTGSQGPVVRVEVSTDGGESWVDAELQDDKPQS----KWTWALWKA 362
Query: 364 TI 365
+
Sbjct: 363 RV 364
>gi|15221314|ref|NP_174901.1| Nitrate reductase (NADH) [Arabidopsis thaliana]
gi|128188|sp|P11035.1|NIA2_ARATH RecName: Full=Nitrate reductase [NADH] 2; Short=NR2
gi|6623972|gb|AAF19225.1|AC007505_1 nitrate reductase [Arabidopsis thaliana]
gi|14194133|gb|AAK56261.1|AF367272_1 At1g37130/F28L22_2 [Arabidopsis thaliana]
gi|16930703|gb|AAL32017.1|AF436835_1 At1g37130/F28L22_2 [Arabidopsis thaliana]
gi|166782|gb|AAA32830.1| nitrate reductase (EC 1.6.6.1) [Arabidopsis thaliana]
gi|14335008|gb|AAK59768.1| At1g37130/F28L22_2 [Arabidopsis thaliana]
gi|14532580|gb|AAK64018.1| putative nitrate reductase [Arabidopsis thaliana]
gi|22137030|gb|AAM91360.1| At1g37130/F28L22_2 [Arabidopsis thaliana]
gi|23296643|gb|AAN13137.1| putative nitrate reductase [Arabidopsis thaliana]
gi|110740277|dbj|BAF02035.1| nitrate reductase [Arabidopsis thaliana]
gi|332193770|gb|AEE31891.1| Nitrate reductase (NADH) [Arabidopsis thaliana]
Length = 917
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES + + D + D + D + I EL + S I P +
Sbjct: 316 RIIVTTKESDNFYHFKDNRVLPSLVDAELADEEGWWYKPEYIINELNINSVITTPCHEEI 375
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK + RV+VT+D G TW+V Q+ + W W
Sbjct: 376 LPINAFTTQRPYTLKGYAYSGGGKKVTRVEVTVDGGETWNVCALDHQEKPNKYGKFWCWC 435
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ D N P++M
Sbjct: 436 FW---------SLEVEVLDLLSAKEIAVRAWDETLNTQPEKM 468
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWA 75
+T YS+S+++ H S W++ +YD T F+ HPGG I++ A E F A
Sbjct: 540 TTAKMYSMSEVKKHNS-ADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEA 598
Query: 76 MYGVHLQDEVFELLESYRIGNI 97
++ D+ ++LE YRIG +
Sbjct: 599 IH----SDKAKKMLEDYRIGEL 616
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK KG WG A V + W G L DVL+ GI
Sbjct: 190 VCAGNRRKEQNMVKKSKGFNWGSAGVSTSVWRGVPLCDVLRRCGI 234
>gi|323452186|gb|EGB08061.1| hypothetical protein AURANDRAFT_26887 [Aureococcus anophagefferens]
Length = 503
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 38 IWVVFRQGVYDITEFVQMHPGGEIIMK-AAGGSIEPFWAMYGVHLQD--EVFELLESYRI 94
+WV +++GVYD+T++ HPGG +K AAGG ++ +WA + VH+QD +LE YR+
Sbjct: 64 LWVSYKRGVYDVTDWAAQHPGGLANLKMAAGGPVDAYWAHWSVHVQDPSAALPVLEKYRV 123
Query: 95 GNI 97
G +
Sbjct: 124 GRL 126
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 298 PVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTR--- 354
PV A + E++G+A++G G+ + RVDV+ D G TW A + P R
Sbjct: 380 PVCSAATAYDPATRELRGFAYAGDGRGVARVDVSFDGGETWTAAAL-----EPPAVRDDA 434
Query: 355 HWGWTLWRATIPVDPKTKEVSI 376
W W LWRA P D T + ++
Sbjct: 435 RWAWRLWRAAAPRDATTLDCAV 456
>gi|284448122|gb|ADB89126.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 131
Score = 64.3 bits (155), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 286 IQELPVISAICLP--VADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I EL + SA+ P + KL ++GY +SGGG+ ++RV+V+ID G+TW ++
Sbjct: 11 INELSINSAVAYPGHLEVVKLDKPAKTYTIKGYCYSGGGRKVIRVEVSIDNGKTWTLSKL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDP----KTKEVSIM--DMLMGKKPHDI 388
T + R+W W W +P+ T E+ + D M ++P +
Sbjct: 71 THPEKPTEYGRYWCWCFWELEVPLSDLWTCDTAEILVRGWDSAMNRQPEKL 121
>gi|110742690|dbj|BAE99256.1| nitrate reductase [Arabidopsis thaliana]
Length = 917
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES + + D + D + D + I EL + S I P +
Sbjct: 316 RIIVTTKESDNFYHFKDNRVLPSLVDAELADEEGWWYKPEYIINELNINSVITTPCHEEI 375
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK + RV+VT+D G TW+V Q+ + W W
Sbjct: 376 LPINAFTTQRPYTLKGYAYSGGGKKVTRVEVTVDGGETWNVCALDHQEKPNKYGKFWCWC 435
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ D N P++M
Sbjct: 436 FW---------SLEVEVLDLLSAKEIAVRAWDETLNTQPEKM 468
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWA 75
+T YS+S+++ H S W++ +YD T F+ HPGG I++ A E F A
Sbjct: 540 TTAKMYSMSEVKKHNS-ADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEA 598
Query: 76 MYGVHLQDEVFELLESYRIGNI 97
++ D+ ++LE YRIG +
Sbjct: 599 IH----SDKAKKMLEDYRIGEL 616
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK KG WG A V + W G L DVL+ GI
Sbjct: 190 VCAGNRRKEQNMVKKSKGFNWGSAGVSTSVWRGVPLCDVLRRCGI 234
>gi|46254755|gb|AAS86310.1| nitrate reductase 2 [synthetic construct]
Length = 928
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES + + D + D + D + I EL + S I P +
Sbjct: 327 RIIVTTKESDNFYHFKDNRVLPSLVDAELADEEGWWYKPEYIINELNINSVITTPCHEEI 386
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK + RV+VT+D G TW+V Q+ + W W
Sbjct: 387 LPINAFTTQRPYTLKGYAYSGGGKKVTRVEVTVDGGETWNVCALDHQEKPNKYGKFWCWC 446
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ D N P++M
Sbjct: 447 FW---------SLEVEVLDLLSAKEIAVRAWDETLNTQPEKM 479
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWA 75
+T YS+S+++ H S W++ +YD T F+ HPGG I++ A E F A
Sbjct: 551 TTAKMYSMSEVKKHNS-ADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEA 609
Query: 76 MYGVHLQDEVFELLESYRIGNI 97
++ D+ ++LE YRIG +
Sbjct: 610 IH----SDKAKKMLEDYRIGEL 627
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK KG WG A V + W G L DVL+ GI
Sbjct: 201 VCAGNRRKEQNMVKKSKGFNWGSAGVSTSVWRGVPLCDVLRRCGI 245
>gi|14334876|gb|AAK59616.1| putative nitrate reductase [Arabidopsis thaliana]
Length = 917
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES + + D + D + D + I EL + S I P +
Sbjct: 316 RIIVTTKESDNFYHFKDNRVLPSLVDAELADEEGWWYKPEYIINELNINSVITTPCHEEI 375
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK + RV+VT+D G TW+V Q+ + W W
Sbjct: 376 LPINAFTTQRPYTLKGYAYSGGGKKVTRVEVTVDGGETWNVCALDHQEKPNKYGKFWCWC 435
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ D N P++M
Sbjct: 436 FW---------SLEVEVLDLLSAKEIAVRAWDETLNTQPEKM 468
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWA 75
+T YS+ +++ H S W++ +YD T F+ HPGG I++ A E F A
Sbjct: 540 TTAKMYSMYEVKKHNS-ADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEA 598
Query: 76 MYGVHLQDEVFELLESYRIGNI 97
++ D+ ++LE YRIG +
Sbjct: 599 IH----SDKAKKMLEDYRIGEL 616
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK KG WG A V + W G L DVL+ GI
Sbjct: 190 VCAGNRRKEQNMVKKSKGFNWGSAGVSTSVWRGVPLCDVLRRCGI 234
>gi|406990080|gb|EKE09769.1| hypothetical protein ACD_16C00110G0004 [uncultured bacterium]
Length = 403
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G ++D G EDLK F+GD RI+EDYLRILR+FRF AR + P + E L A
Sbjct: 132 GHLFDPVEGLEDLKAHRVRFIGDASLRIKEDYLRILRFFRFSARFGHEP--YSPEGLKAC 189
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
+ L +++ ER+ E KIL
Sbjct: 190 EGYASHLPHLARERVTDEFLKIL 212
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 897 RITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+ITTLRIDV T GR A V FTEDW DA RRD T+N+++
Sbjct: 89 QITTLRIDVKTFGRKAHVAFTEDWVQDAQRRDFTINAIY 127
>gi|359413009|ref|ZP_09205474.1| Polynucleotide adenylyltransferase region [Clostridium sp. DL-VIII]
gi|357171893|gb|EHJ00068.1| Polynucleotide adenylyltransferase region [Clostridium sp. DL-VIII]
Length = 446
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 539 SGYQPRATLQGAR--LLTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEK 596
+GY+ A R +L++ P + K+ PD ++L F L G+ K
Sbjct: 21 NGYEAYAVGGCVRDSILSKKPKDWDITTKAKPDDVIRL----FDRVV------LTGL--K 68
Query: 597 HGYQLRIAGEGTVTAKVLSYRNRREKEDRIGENQPFRKLTLSVQDKDRSFRLDGTVY--- 653
HG I +V +YRN E ED Q +L R F ++ Y
Sbjct: 69 HGTVTIILNNEN--YEVTTYRNDGEYEDNRHPKQVKFVSSLKEDLARRDFTINAMAYNEI 126
Query: 654 ----DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
DYF G +DL + VGDP R ED LR+LR RF A + ++ +++AI
Sbjct: 127 NGLIDYFGGIQDLNDKIIKTVGDPKQRFGEDALRMLRAIRFSAELNFRIDS---AIITAI 183
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLK 743
K D + IS ERI E NKIL K +LK
Sbjct: 184 KELKDNIKYISKERIREEFNKILINDSRKIEILK 217
>gi|336430252|ref|ZP_08610206.1| hypothetical protein HMPREF0994_06212 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336000556|gb|EGN30705.1| hypothetical protein HMPREF0994_06212 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 442
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 17/140 (12%)
Query: 607 GTVTA-------KVLSYRNRREKEDRIGENQPFRKLTLSVQDKDRSFRLDGTVY------ 653
GTVT +V +YR E ED + L K R F ++ Y
Sbjct: 68 GTVTVMLKKNGYEVTTYRVDGEYEDGRHPKEVIFTANLIEDLKRRDFTINAMAYNEESGL 127
Query: 654 -DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNN 712
D F+G EDL++G+ VGD R ED LRI+R RF A++ + +E+ +AI+ +
Sbjct: 128 VDAFSGKEDLEEGIIRCVGDADERFTEDALRIMRAVRFSAQL---GFSMEEKTKAAIRGH 184
Query: 713 LDGLHNISGERIWTELNKIL 732
+ L +S ERI TEL K++
Sbjct: 185 AENLRKVSAERIQTELTKLV 204
>gi|452841601|gb|EME43538.1| hypothetical protein DOTSEDRAFT_25465 [Dothistroma septosporum
NZE10]
Length = 367
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTD--------WDTVDFAKSPAIQELPVISAICLPVA 300
++ + ES +H+Q DYK P W+T+ PA+QE+PV S I P +
Sbjct: 203 QITVQMKESENHYQHFDYKVLPPEVQNMDQAKDVWETI-----PAVQEMPVNSVIAWPQS 257
Query: 301 DAKLKLE-NHQMEVQGYAW-SGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGW 358
++ + N + V GYA SG +V+V+++ D+G++W A+ G P W W
Sbjct: 258 GGTVRRDVNGAIGVAGYALPSGEDGPVVKVEISSDRGKSWTEADLIGH----PEESKWSW 313
Query: 359 TLWRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQ 398
LW A I V+ KE ++ D A N P+Q
Sbjct: 314 RLWEARIKVN-AGKEQTVYSRAT-------DRAGNTQPEQ 345
>gi|284447517|gb|ADB88832.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 131
Score = 63.9 bits (154), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 286 IQELPVISAICLP--VADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I EL + SAI P + L ++GY ++GGG+ ++RV+V+ID G+TW ++
Sbjct: 11 INELNINSAIAYPGHLEVVPLTQPKQTYPIRGYCYTGGGRKVIRVEVSIDGGKTWTLSEL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDP----KTKEVSIM--DMLMGKKPHDI 388
T + P R+W W +R +P+ +T E+ D M ++P +I
Sbjct: 71 THPEKPTPHGRYWCWCFFRLDVPLSALYECETPEILCRGWDAAMNRQPENI 121
>gi|168183936|ref|ZP_02618600.1| polyA polymerase family protein [Clostridium botulinum Bf]
gi|237795817|ref|YP_002863369.1| polyA polymerase family protein [Clostridium botulinum Ba4 str.
657]
gi|182672935|gb|EDT84896.1| polyA polymerase family protein [Clostridium botulinum Bf]
gi|229261764|gb|ACQ52797.1| polyA polymerase family protein [Clostridium botulinum Ba4 str.
657]
Length = 450
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 108/241 (44%), Gaps = 51/241 (21%)
Query: 516 VRVEIWSKAVDSSYNTQPENGHPSGYQPRATLQGARLLTRPPNPHSVRFKSGPDGKMKLD 575
+++EI K V+ NT ENG+ + Y ++ + LL R N + + P
Sbjct: 6 IKMEI-PKGVEYIINTLQENGYEA-YIVGGAVRDS-LLERKVNDWDITTSANP------- 55
Query: 576 SPEFHSCFTPELKRLAGIFEKHGYQLRIAG--EGTVTA-------KVLSYR-------NR 619
+ + IFE GY++ G GTVT +V ++R NR
Sbjct: 56 ------------QEVVNIFENLGYKIIPTGLKHGTVTILINSIGYEVTTFRIDGEYEDNR 103
Query: 620 REKEDR----IGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVS 675
R KE + + E+ R LT++ + RL DYF+G EDL + VGD
Sbjct: 104 RPKEVKFTSNLKEDLKRRDLTINAMAYNDKTRL----VDYFHGLEDLNNKIIRCVGDSKD 159
Query: 676 RIQEDYLRILRYFRFFARICNNPNNHKEEVLS-AIKNNLDGLHNISGERIWTELNKILGG 734
R+ ED LR+LR RF +++ N H EE +I+ + N+S ERI EL KIL
Sbjct: 160 RLNEDSLRMLRCIRFASQL----NFHMEESTKLSIRELSRNIANVSMERIRDELCKILVS 215
Query: 735 S 735
S
Sbjct: 216 S 216
>gi|406968152|gb|EKD93069.1| hypothetical protein ACD_28C00254G0001 [uncultured bacterium]
Length = 448
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 551 RLLTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVT 610
RLL + P + + +GPD +L L++ I ++ G L I GE
Sbjct: 39 RLLNKEPKDYDIVTSAGPDDIERL------------LQKTIPIGKEFGVILAIEGEHHF- 85
Query: 611 AKVLSYRNRREKEDRIGENQPFRKLTLSVQD-KDRSFRLDG--------TVYDYFNGHED 661
++ ++R+ D G T + D K R F ++G +YDY G D
Sbjct: 86 -EIATFRSDAGYSD--GRRPDAVTFTSAEDDAKRRDFTINGLFYDPLADEIYDYVGGRAD 142
Query: 662 LKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISG 721
LK+ + F+GDP RI ED+LR+LR R + + E A+ + + +SG
Sbjct: 143 LKERMVRFIGDPHQRILEDHLRLLRAVRLKNTL---QFQYHPETYRAVVQHHARVSRVSG 199
Query: 722 ERIWTELNKILGGSFSKEMMLKMLYQNLL 750
ERI ELNKI+ + E +L +L
Sbjct: 200 ERIRDELNKIMMSDHAVEAWEDLLETGIL 228
>gi|89069489|ref|ZP_01156839.1| molybdopterin oxidoreductase [Oceanicola granulosus HTCC2516]
gi|89044970|gb|EAR51057.1| molybdopterin oxidoreductase [Oceanicola granulosus HTCC2516]
Length = 358
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLEN 308
++ + D S S Q DYK F PS ++ + I+++PV SAICLP D +
Sbjct: 204 EIDVRDAPSDSPVQARDYKLFPPSVARQDANWDEGVTIEQMPVTSAICLPRPDEPIP--P 261
Query: 309 HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLW 361
+ V+GYA + G K + RVDV+ D GR+W A + + A WTLW
Sbjct: 262 GRTTVKGYAMAYGRK-VARVDVSTDGGRSWRQAGLMSERTTA------AWTLW 307
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 482 EIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRVRVEI 520
E+ KAVD + +QPE IWN G L+ A+HRV V++
Sbjct: 319 ELVVKAVDEAGQSQPECLEGIWNFAGYLATAWHRVIVDV 357
>gi|730148|sp|P39864.1|NIA_PHYIN RecName: Full=Nitrate reductase [NADPH]; Short=NR
gi|538158|gb|AAA86681.1| nitrate reductase [Phytophthora infestans]
Length = 902
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD----FAKSP-AIQELPVISAICLPVADAK 303
++ +SDHES++H D + +T ++KSP AI EL V + + LP D
Sbjct: 299 RIHVSDHESSNHHHIMDNRVLPSHVTAETATAEGWWSKSPYAIMELNVNAVVILPNHDDL 358
Query: 304 LKL-------ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHW 356
L L + ++GYA+SGGG+ ++RV+VT+D G +W +A + + + W
Sbjct: 359 LALGEDTTFNDIETYTIKGYAYSGGGRRVIRVEVTLDDGASWQLARIIYHERPSKYGKMW 418
Query: 357 GWTLWRATIPV 367
W + P+
Sbjct: 419 CWVHYELAAPM 429
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGS--IEPFW 74
+S LP ++ H K S W + R VYD T F+ HPGG + GG+ + F
Sbjct: 534 LSELPLIFADEVAKHNS-KKSCWFICRDLVYDATPFLDEHPGGATSILLCGGTDCTDEFE 592
Query: 75 AMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASD 112
+++ + +++L+ Y IG S + D +SD
Sbjct: 593 SIHST----KAWQMLKKYCIGRCSSTEDDTGTSDTSSD 626
>gi|301102933|ref|XP_002900553.1| nitrate reductase [NADPH], putative [Phytophthora infestans T30-4]
gi|262101816|gb|EEY59868.1| nitrate reductase [NADPH], putative [Phytophthora infestans T30-4]
Length = 902
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 248 GKVILSDHESTSHWQQNDYKGFSPSTDWDTVD----FAKSP-AIQELPVISAICLPVADA 302
++ +SDHES++H D + +T ++KSP AI EL V + + LP D
Sbjct: 298 ARIHVSDHESSNHHHIMDNRVLPSHVTAETATAEGWWSKSPYAIMELNVNAVVILPNHDD 357
Query: 303 KLKL-------ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRH 355
L L + ++GYA+SGGG+ ++RV+VT+D G +W +A + + +
Sbjct: 358 LLALGEDTTFNDIETYTIKGYAYSGGGRRVIRVEVTLDDGASWQLARIIYHERPSKYGKM 417
Query: 356 WGWTLWRATIPV 367
W W + P+
Sbjct: 418 WCWVHYELAAPM 429
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGS--IEPFW 74
+S LP ++ H K S W + R VYD T F+ HPGG + GG+ + F
Sbjct: 534 LSELPLIFADEVAKHNS-KKSCWFICRDLVYDATPFLDEHPGGATSILLCGGTDCTDEFE 592
Query: 75 AMYGVHLQDEVFELLESYRIGNISQEDSKLAAKDIASD 112
+++ + +++L+ Y IG S + D +SD
Sbjct: 593 SIHST----KAWQMLKKYCIGRCSSTEDDTGTSDTSSD 626
>gi|240850137|ref|YP_002971530.1| tRNA nucleotidyltransferase [Bartonella grahamii as4aup]
gi|240267260|gb|ACS50848.1| tRNA nucleotidyltransferase [Bartonella grahamii as4aup]
Length = 418
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G +YD G D+ F+G RI EDYLRILR+FRFFA P+ + +
Sbjct: 136 GNLYDDVGGLSDIASRTVRFIGIAEDRICEDYLRILRFFRFFAWYGAGRPDVQGLKACVS 195
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+K+ GL +S ERIW E+ K+L +L M +L
Sbjct: 196 LKH---GLKKLSSERIWAEMKKLLAAFDPTRALLWMRQSRIL 234
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F DWK DA RRD T+N+++
Sbjct: 94 VTTLRCDIETDGRHAKVAFGRDWKKDAERRDFTINALY 131
>gi|730146|sp|P39869.1|NIA_LOTJA RecName: Full=Nitrate reductase [NADH]; Short=NR
gi|517356|emb|CAA56696.1| nitrate reductase (NADH) [Lotus japonicus]
Length = 900
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++++++ E H+ D + D + + + I EL + S I P D
Sbjct: 294 RIVVTEEECDGHYHYKDNRVLPSHVDAELANEEGWWYKPEYIINELNINSVITTPCHDEI 353
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GY++SGGG+ + RV+VT+D G TW V Q+ ++W W
Sbjct: 354 LPINAWTTQRPYTLRGYSYSGGGRKVTRVEVTLDGGETWFVCALDQQEKPNKYGKYWCWC 413
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ D A N P+ +
Sbjct: 414 FW---------SLEVEVLDLLGTKEIAVRAWDEALNTQPENL 446
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YSLS+++ H S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 524 YSLSEVKKHNSPDSA-WIIVHGHVYDCTRFLKDHPGGADSILINAGTDCTEEFEAIH--- 579
Query: 81 LQDEVFELLESYRIGNI 97
D+ ++LE YR+G +
Sbjct: 580 -SDKAKKMLEDYRVGEL 595
>gi|381210160|ref|ZP_09917231.1| poly(A)polymerase [Lentibacillus sp. Grbi]
Length = 400
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 633 RKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFA 692
R T++ D++ G + D FNG ED++KG+ VG+ R +ED LRI+R RF +
Sbjct: 113 RDFTINALAMDKT----GVIIDLFNGQEDIQKGIIRTVGNGYDRFKEDPLRIMRALRFSS 168
Query: 693 RICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMM 741
++ + N H L A+++ ++ L +I+ ERI E K G++ + M
Sbjct: 169 QLGFSLNKH---TLKAMQSVINELKSIAVERILQETAKFFAGAYIETGM 214
>gi|283779836|ref|YP_003370591.1| tRNA adenylyltransferase [Pirellula staleyi DSM 6068]
gi|283438289|gb|ADB16731.1| tRNA adenylyltransferase [Pirellula staleyi DSM 6068]
Length = 419
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 635 LTLSVQDKD---RSFRLDGT--------VYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
+T S + D R F ++G V DY G DL V + DP RI+ED LR
Sbjct: 107 ITFSTPEHDAQRRDFTINGLFFDPIEERVIDYVGGEADLAARVVRAIRDPAERIEEDKLR 166
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
+LR RF AR+ + + + L+AI+ D L +S ERI E+ KIL
Sbjct: 167 MLRAVRFAARLG---FSIEAQTLAAIEQRADQLQVVSAERIAAEMEKIL 212
>gi|339265323|ref|XP_003366214.1| cytochrome b5 [Trichinella spiralis]
gi|316963804|gb|EFV49227.1| cytochrome b5 [Trichinella spiralis]
Length = 171
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSI 70
LP + +++ H + +WV FR GVYDITEFV +HPGG+IIM+A GG +
Sbjct: 83 LPTFRAEEVKLHNEKDRKLWVTFRGGVYDITEFVDVHPGGKIIMQAVGGPL 133
>gi|224063150|ref|XP_002301015.1| predicted protein [Populus trichocarpa]
gi|222842741|gb|EEE80288.1| predicted protein [Populus trichocarpa]
Length = 909
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D + + + I EL + SAI P +
Sbjct: 305 RIIVTTKESDSYYHYMDNRVLPSHVDTELANAEAWWYKTEYIINELNINSAITTPSHEEI 364
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGGK + R +VT+D G TW V N + ++W W
Sbjct: 365 LPINSWTTQSPFTLKGYAYSGGGKKVTRAEVTLDGGETWRVCNLDHPEKPNKYGKYWCWC 424
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV I+++L K+
Sbjct: 425 FW---------SLEVEILELLGAKE 440
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+S+++++ H +S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 535 FSMAEVKKHNSAESA-WIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 590
Query: 81 LQDEVFELLESYRIGNI 97
D+ ++LE YRIG +
Sbjct: 591 -SDKAKKMLEGYRIGEL 606
>gi|399073412|ref|ZP_10750460.1| tRNA nucleotidyltransferase/poly(A) polymerase [Caulobacter sp.
AP07]
gi|398041778|gb|EJL34833.1| tRNA nucleotidyltransferase/poly(A) polymerase [Caulobacter sp.
AP07]
Length = 406
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 624 DRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683
D+ E + FR L V + R + G G D ++G FVGDP++RI+EDYLR
Sbjct: 107 DQDAERRDFRFNALYVDPQGRLYDPTG------EGVNDAREGRVVFVGDPMTRIREDYLR 160
Query: 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLK 743
ILR+FRF A + K L+A K + + ER EL K+L + +
Sbjct: 161 ILRFFRFQAWYGKGEADQK--ALAACKALKGMVEGRAAERTQKELLKLLAADDPRAALRL 218
Query: 744 MLYQNLLLFSKLKATTMREYIVELMKYK-----EKSELIKDFHKWRLPTF-PMNGNIIRQ 797
M ++L +++ ++ L +++ E +L ++ + RL P + I Q
Sbjct: 219 MAATSVL-------SSILPFVKSLARFEGLMTIETEQLFENDPELRLAALIPDDPKIAAQ 271
Query: 798 FFARICNNPNNHKEEVLSAIKKN 820
R+ N KE ++ A+ K+
Sbjct: 272 MAERL-RLSNALKERLVEAVGKS 293
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 838 KILGGSFSKEMMLKMLE-INMFPHLGTDETFATLDFEGLFRSMPI-----PFTLLFSANF 891
+ +GG +M K ++ I++ L D+ L GL R++P T +
Sbjct: 23 RFVGGCVRNTVMGKPIDDIDIATTLTPDQVIEALHEAGL-RAIPTGVDHGTVTAIAKGRP 81
Query: 892 FRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+ +TTLR DV+TDGR A V FT+DW DA RRD N++++
Sbjct: 82 YE----VTTLRRDVSTDGRRAVVSFTQDWDQDAERRDFRFNALYV 122
>gi|148677406|gb|EDL09353.1| cytochrome b-5, isoform CRA_b [Mus musculus]
Length = 117
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 13 AGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMK--AAGGSI 70
AG+ + +Y+L +IQ HKD KS+ WV+ VYD+T+F++ HPGGE +++ A G +
Sbjct: 2 AGQSDKDVKYYTLEEIQKHKDSKST-WVILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 60
Query: 71 EPFWAMYGVHLQDEVFELLESYRIGNISQED-SKLAAKDIASDPY 114
E F V + EL ++Y IG + +D SK+A ++ Y
Sbjct: 61 ENFE---DVGHSTDARELSKTYIIGELHPDDRSKIAKPSVSLSKY 102
>gi|422316577|ref|ZP_16397969.1| hypothetical protein FPOG_00771 [Fusobacterium periodonticum D10]
gi|404590907|gb|EKA93174.1| hypothetical protein FPOG_00771 [Fusobacterium periodonticum D10]
Length = 451
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
Query: 612 KVLSYRNRREKEDRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVG 671
K++ N+ + D I E+ R +++ + + DG V D +NG +D++ V FVG
Sbjct: 101 KIVPEDNKVDFVDDIKEDLARRDFSINAMAYNEA---DGIV-DLYNGQKDIENKVINFVG 156
Query: 672 DPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKI 731
+ RI ED LRILR FRF +R+ + + E + AIK D L +I ERI E +K+
Sbjct: 157 NAEERIIEDPLRILRAFRFMSRLAFSLS---ENTIEAIKKQKDLLKSIPEERITMEFSKL 213
Query: 732 LGGSFSKEMMLKM 744
L G K + M
Sbjct: 214 LLGENVKNTLTAM 226
>gi|365924917|ref|ZP_09447680.1| tRNA CCA-pyrophosphorylase [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420266400|ref|ZP_14768872.1| tRNA CCA-pyrophosphorylase [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394425510|gb|EJE98469.1| tRNA CCA-pyrophosphorylase [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 403
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
+ L+G + D F G EDLKKG+ VG+P R ED LR++R RF +++ +
Sbjct: 124 ALSLNGEIIDLFGGLEDLKKGLIKAVGNPNERYHEDALRMMRTVRFASQL---DFEIETT 180
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYI 764
L A+ NN L I+ ERI E K+L G K+ ++ L L ++ L T E +
Sbjct: 181 TLEAVTNNAHLLEKIAVERINVEWIKLLLGKNPKKGIVGFLDTKLFVYCPLFNTM--EQV 238
Query: 765 VELMKYKEKSELIKDFHKWRLPTF 788
++ M E+ D W L +
Sbjct: 239 LKTMLSLEQLHFSDDVAAWTLFCY 262
>gi|218201285|gb|EEC83712.1| hypothetical protein OsI_29540 [Oryza sativa Indica Group]
Length = 794
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES +++ D + F D + + + I EL V S I P D
Sbjct: 315 RIIVTTAESDNYYHYKDNRVFPSHVDAELANADAWWYKPEYIINELNVNSVITAPGHDEI 374
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK I RV+VT+D G TW V + +HW W
Sbjct: 375 LPINGITTQRGYTMKGYAYSGGGKRITRVEVTLDGGETWLVCVLDLPEKPTKYGKHWCWC 434
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 435 FW---------SVEVEVLDLLGAKE 450
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++S+++ H + S W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 545 FTMSEVRKHSS-QDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAIH--- 600
Query: 81 LQDEVFELLESYRIGNI-------SQEDSKLAAKDIASDPYVMEPVRSPLLKATS 128
D+ LL++YRIG + S ++S A +++ + E +++P A S
Sbjct: 601 -SDKAKALLDTYRIGELITTGAGYSSDNSVHGASNLSQLAPIREAIKAPAPVALS 654
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS 470
C+ KE V+ G +G AAV + W GARL DVL+ GI P +
Sbjct: 191 ACSGNRRKEQNMVQQTVGFNFGAAAVSTSVWHGARLRDVLRRCGIMPSKG 240
>gi|227202742|dbj|BAH56844.1| AT1G37130 [Arabidopsis thaliana]
Length = 555
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES + + D + D + D + I EL + S I P +
Sbjct: 316 RIIVTTKESDNFYHFKDNRVLPSLVDAELADEEGWWYKPEYIINELNINSVITTPCHEEI 375
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK + RV+VT+D G TW+V Q+ + W W
Sbjct: 376 LPINAFTTQRPYTLKGYAYSGGGKKVTRVEVTVDGGETWNVCALDHQEKPNKYGKFWCWC 435
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++D+L K+ D N P++M
Sbjct: 436 FW---------SLEVEVLDLLSAKEIAVRAWDETLNTQPEKM 468
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK KG WG A V + W G L DVL+ GI
Sbjct: 190 VCAGNRRKEQNMVKKSKGFNWGSAGVSTSVWRGVPLCDVLRRCGI 234
>gi|187932836|ref|YP_001885873.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Clostridium botulinum B str. Eklund 17B]
gi|187720989|gb|ACD22210.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Clostridium botulinum B str. Eklund 17B]
Length = 432
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVL 706
++DG + DYF G DLKK V VG+ R ED LR+LR RF +++ + +N E L
Sbjct: 125 KVDGLI-DYFEGVSDLKKKVIKTVGNSEKRFSEDALRMLRAIRFSSQLNFSISN---ETL 180
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
++IKN + + NIS ERI E NKIL
Sbjct: 181 NSIKNLRENIKNISKERIREEFNKIL 206
>gi|146339019|ref|YP_001204067.1| poly(A) polymerase [Bradyrhizobium sp. ORS 278]
gi|146191825|emb|CAL75830.1| putative poly(A) polymerase [Bradyrhizobium sp. ORS 278]
Length = 417
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V+D+ G D++ F+GDP RI EDYLRILR+FR + + + +E L+
Sbjct: 134 DGVVHDHVGGLADIEARRVRFIGDPSQRIAEDYLRILRFFRIHSAFGHGEPD-REGYLAC 192
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
I GL +S ER+ E+ K+L
Sbjct: 193 IAGR-GGLATLSAERVRMEMLKLL 215
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLR D T GR A+V F DW DA+RRD T+N++ +G
Sbjct: 93 VTTLREDTETFGRKAKVAFGRDWVGDAHRRDFTINALSVG 132
>gi|416352603|ref|ZP_11681357.1| poly A polymerase family protein [Clostridium botulinum C str.
Stockholm]
gi|338195758|gb|EGO88003.1| poly A polymerase family protein [Clostridium botulinum C str.
Stockholm]
Length = 318
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG + DYFN DL + VGDPV R ED LRILR +RF A++ N + L+A
Sbjct: 7 DGLI-DYFNSKNDLDSRIIKCVGDPVKRFSEDALRILRAYRFAAQLGFKIEN---KTLNA 62
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
K L NIS ERI E+NKIL
Sbjct: 63 TKQLKGNLKNISIERIRDEINKIL 86
>gi|317495207|ref|ZP_07953577.1| poly A polymerase head domain-containing protein [Gemella
morbillorum M424]
gi|316914629|gb|EFV36105.1| poly A polymerase head domain-containing protein [Gemella
morbillorum M424]
Length = 382
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 612 KVLSYRNRREKEDRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVG 671
KV RN +E DR R T++ D G +YD+ NG DLK GV V
Sbjct: 101 KVEFVRNLKEDLDR-------RDFTINAMAMDSR----GVIYDFHNGVTDLKNGVIRTVN 149
Query: 672 DPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKI 731
+P R ED LR+LR FRF +++ +E AIK N + +S ERI +E K+
Sbjct: 150 NPSERFYEDSLRMLRAFRFSSKLNFEI---EESTFFAIKKNAKLIEFVSVERIVSEFKKL 206
Query: 732 LGGSFSKEMMLKML 745
L G K + K++
Sbjct: 207 LVGVGCKNSLEKLI 220
>gi|197106337|ref|YP_002131714.1| tRNA nucleotidyltransferase/poly(A) polymerase [Phenylobacterium
zucineum HLK1]
gi|196479757|gb|ACG79285.1| tRNA nucleotidyltransferase/poly(A) polymerase [Phenylobacterium
zucineum HLK1]
Length = 416
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 647 RLDGTVYD-YFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNN-PNNHKEE 704
R DGT++D +G D K G F+G+P R+ EDYLRILR+FRF+A P+
Sbjct: 133 RRDGTIFDPTGHGVADAKAGRIVFMGEPAQRLAEDYLRILRFFRFYAWYGKGEPDAAAVA 192
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGG 734
+A K+N + +++ ERI EL K+L
Sbjct: 193 ACAAAKDN---IQSLAAERISKELLKLLAA 219
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
ITTLR DV+TDGR A V FT+DW DA+RRD T+NS++
Sbjct: 94 ITTLRRDVSTDGRRATVAFTDDWMEDADRRDFTLNSLY 131
>gi|192289790|ref|YP_001990395.1| polynucleotide adenylyltransferase [Rhodopseudomonas palustris
TIE-1]
gi|192283539|gb|ACE99919.1| Polynucleotide adenylyltransferase region [Rhodopseudomonas
palustris TIE-1]
Length = 418
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKE 703
S DGTV+DY G D+ F+GDP RI EDYLRILR+FR A P+ ++
Sbjct: 131 SMSADGTVHDYVGGLVDIAARRVRFIGDPDQRIAEDYLRILRFFRIHAAYGAGEPD--RD 188
Query: 704 EVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
L+ I+ GL +S ER E+ K++ ++ ++ M
Sbjct: 189 AYLACIRGR-GGLAALSAERQRMEMLKLMIAGGAEASVVAM 228
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV T GR A+V F DW+ DA RRD T+N++
Sbjct: 94 ITTLREDVETFGRKAKVAFGRDWERDAQRRDFTINAL 130
>gi|418465710|ref|ZP_13036643.1| poly(A) polymerase [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359755745|gb|EHK89908.1| poly(A) polymerase [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 488
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI---CNNPNNHKEEV 705
D T+ DYFNG EDLK G +GDPV+R QED +R+LR RF A++ + P+ +
Sbjct: 195 DNTLKDYFNGIEDLKNGKLRLIGDPVTRYQEDPVRMLRSIRFMAKLDMFLDKPSETPIKE 254
Query: 706 LSAIKNNLDGLHNISGERIWTELNKIL-GGSFSKEMMLKMLY 746
LS + L NI R++ E K+L GGS K L Y
Sbjct: 255 LSHL------LKNIPPARLFEESLKLLQGGSGVKTYRLLRQY 290
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 376 IMDMLMGKKPHDIDFATNATPDQMKAMFAEE 406
+ D+L+GKKP D D ATNA P+Q++A+F +
Sbjct: 90 LRDLLLGKKPKDFDVATNARPEQIQAIFQRQ 120
>gi|295659909|ref|XP_002790512.1| sulfite oxidase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281689|gb|EEH37255.1| sulfite oxidase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 448
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 16/129 (12%)
Query: 255 HESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLKL-ENHQ 310
HES S +QQ+DYK P + W+ + +AK P++Q +P+ S + +P D + L + +
Sbjct: 275 HESPSFYQQHDYKILPPEALTWEIAEQYWAKVPSMQSMPINSVVAVPNDDETVTLPASGK 334
Query: 311 MEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFT-GQDSQAPLTRH----------WGW 358
+EV+G+A G + + RV+V+ D G+TW A G+D + W W
Sbjct: 335 IEVKGFAVPEGAEGPVTRVEVSADGGKTWVDAELDYGEDGDGNGDSNDMKMKWQKSKWSW 394
Query: 359 TLWRATIPV 367
LWRA + V
Sbjct: 395 VLWRAEVEV 403
Score = 40.0 bits (92), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 18/105 (17%)
Query: 363 ATIP-VDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKV-RTFNEKGEKHGT 420
+ IP +DP T VSI D+ + DQ++ F + +V G + T
Sbjct: 43 SAIPDLDPGTHTVSITG--------DVASPLRLSVDQLRHEFPQHEVLSALQCAGNRRHT 94
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
+ ++ K V GL W AV N TW+G RL DVL AG+
Sbjct: 95 MRTKL--------KEVVGLDWMDGAVMNCTWSGPRLRDVLIKAGV 131
>gi|155969991|gb|ABU41686.1| sulfite oxidase [Ajellomyces capsulatus]
gi|225556948|gb|EEH05235.1| sulfite oxidase [Ajellomyces capsulatus G186AR]
Length = 403
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 255 HESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLKLE-NHQ 310
+ES + +QQ+DYK P + W+ + + K PA+Q +PV S + +P D+ + L + +
Sbjct: 240 NESPNFYQQHDYKILPPEALTWEIAEEYWPKVPAMQCMPVNSVVAVPNDDSTIYLPPSGE 299
Query: 311 MEVQGYAWS-GGGKAIVRVDVTIDQGRTWHVANFT-GQDSQAPLTRHWGWTLWRATIPVD 368
+E++G+A G + RV+V++D G+TW A G W W LWRA + V+
Sbjct: 300 LEIKGFAVPFGADGPVTRVEVSVDGGKTWVDAELDYGPHESNKSKNKWAWVLWRAAVKVE 359
>gi|407799525|ref|ZP_11146418.1| polyA polymerase family protein [Oceaniovalibus guishaninsula
JLT2003]
gi|407058710|gb|EKE44653.1| polyA polymerase family protein [Oceaniovalibus guishaninsula
JLT2003]
Length = 384
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 49/86 (56%)
Query: 647 RLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVL 706
R DGTV D G DL+ G F+GD +RI+EDYLRILRYFRF A + E L
Sbjct: 129 RADGTVVDPLGGLPDLRAGRVRFIGDAEARIREDYLRILRYFRFHAWYGDADGGLDAEAL 188
Query: 707 SAIKNNLDGLHNISGERIWTELNKIL 732
+A DGL + ER+ E+ K+L
Sbjct: 189 AACAALADGLEILPAERVTAEMLKLL 214
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F + + DA RRD T+N+++
Sbjct: 90 VTTFRRDVETDGRRAVVAFADTLREDAMRRDFTMNALY 127
>gi|416051543|ref|ZP_11577591.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype e
str. SC1083]
gi|347992976|gb|EGY34353.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype e
str. SC1083]
Length = 488
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI---CNNPNNHKEEV 705
D T+ DYFNG EDLK G +GDPV+R QED +R+LR RF A++ + P+ +
Sbjct: 195 DNTLKDYFNGIEDLKSGKLRLIGDPVTRYQEDPVRMLRSIRFMAKLDMFLDKPSETPIKE 254
Query: 706 LSAIKNNLDGLHNISGERIWTELNKIL-GGSFSKEMMLKMLY 746
LS + L NI R++ E K+L GGS K L Y
Sbjct: 255 LSHL------LKNIPPARLFEESLKLLQGGSGVKTYRLLRQY 290
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEE 406
+ D+L+GKKP D D ATNA P+Q++A+F +
Sbjct: 89 CLRDLLLGKKPKDFDVATNARPEQIQAIFQRQ 120
>gi|378726896|gb|EHY53355.1| sulfite oxidase [Exophiala dermatitidis NIH/UT8656]
Length = 357
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 249 KVILSDHESTSHWQQNDYKGFSP-STDWDTVD--FAKSPAIQELPVISAICLPVADAKLK 305
+V +S+ ES +QQ DYK P + D ++ + +AK P + E+P+ S + P ++A ++
Sbjct: 191 RVTVSNQESPCFYQQRDYKILPPEAVDAESAEKFWAKCPTMLEMPINSCVAWPTSEAAIR 250
Query: 306 L-ENHQMEVQGYAWSGGGKA-IVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRA 363
+ ++V GYA G +VRV V+ D+G+TW A+ ++ W W LW A
Sbjct: 251 FPASGLIDVLGYAVPQGTHGPVVRVQVSGDEGKTWTDAHL---ENGGKFASKWSWVLWHA 307
Query: 364 TIPVD 368
I ++
Sbjct: 308 RIKIE 312
>gi|128194|sp|P17569.1|NIA_CUCMA RecName: Full=Nitrate reductase [NADH]; Short=NR
gi|167499|gb|AAA33114.1| nitrate reductase [Cucurbita maxima]
Length = 918
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES +++ D + D D + + I EL + S I P +
Sbjct: 317 RIIVTTKESENYYHFKDNRVLPSHVDADVANAEAWWYKPEHIINELNINSVITTPCHEEI 376
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GY++SGGGK + RV+VT+D G TW V + ++W W
Sbjct: 377 LPINAWTTQRPYTLRGYSYSGGGKKVTRVEVTMDSGETWQVCTLDHPEKANKYGKYWCWC 436
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 437 FW---------SLEVEVLDLLSAKE 452
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
Y+LS+++ H +S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 546 YTLSEVKKHNSPQSA-WIIVHGHVYDCTRFLKDHPGGSDSILINAGTDCTEEFDAIH--- 601
Query: 81 LQDEVFELLESYRIGNI 97
D+ ++LE YRIG +
Sbjct: 602 -SDKAKKMLEDYRIGEL 617
>gi|39934263|ref|NP_946539.1| polynucleotide adenylyltransferase [Rhodopseudomonas palustris
CGA009]
gi|39648111|emb|CAE26631.1| possible poly(A) polymerase [Rhodopseudomonas palustris CGA009]
Length = 418
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKE 703
S DGTV+DY G D+ F+GDP RI EDYLRILR+FR A P+ ++
Sbjct: 131 SMSADGTVHDYVGGLVDIAARRVRFIGDPDQRIAEDYLRILRFFRIHAAYGAGEPD--RD 188
Query: 704 EVLSAIKNNLDGLHNISGERIWTELNKIL 732
L+ I+ GL +S ER E+ K++
Sbjct: 189 AYLACIRGR-GGLAALSAERQRMEMLKLM 216
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
ITTLR DV T GR A+V F DW+ DA RRD T+N++
Sbjct: 94 ITTLREDVETFGRKAKVAFGRDWERDAQRRDFTINAL 130
>gi|295981672|emb|CBL88369.1| putative nitrate reductase (NADH) [Saponaria officinalis]
Length = 837
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 24/148 (16%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPA--------IQELPVISAICLPVA 300
++I++D ES +++ D + D + A S A I EL + S I P
Sbjct: 253 RIIVTDQESDNYYHYKDNRVLPSYVD---AELANSEAWWYRPEYIINELNINSVITTPCH 309
Query: 301 DAKLKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHW 356
D L + + ++GYA+SGGGK + RV+VT+D G TW V + W
Sbjct: 310 DEILPINEWTTQRPYTLRGYAYSGGGKKVTRVEVTVDGGETWQVCTTDHPEKPNKYGIFW 369
Query: 357 GWTLWRATIPVDPKTKEVSIMDMLMGKK 384
W W + EV ++D+L K+
Sbjct: 370 CWCFW---------SLEVEVLDLLGAKE 388
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+S+S+++ H S+ W++ +YD T F+ HPGG I++ A E F A++
Sbjct: 483 FSMSEVKKHNSTDSA-WIIVHDYIYDCTRFLNDHPGGADSILINAGTDCTEEFEAIH--- 538
Query: 81 LQDEVFELLESYRIGNI 97
D+ ++LESYRIG +
Sbjct: 539 -SDKAKKMLESYRIGEL 554
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 26/61 (42%)
Query: 405 EEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAG 464
++ V F + VCA KE K G WG A V + W G L DVLK G
Sbjct: 112 DQLVNEFQSREFPVSLVCAGNRRKEQNMTKQTIGFNWGAAGVSTSVWRGVPLCDVLKRCG 171
Query: 465 I 465
I
Sbjct: 172 I 172
>gi|296817547|ref|XP_002849110.1| sulfite oxidase [Arthroderma otae CBS 113480]
gi|238839563|gb|EEQ29225.1| sulfite oxidase [Arthroderma otae CBS 113480]
Length = 414
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 226 NAEP-PPSMLYSSLLRIP------FCSHTGKVILSDHESTSHWQQNDYKGFSP-STDWDT 277
N EP PP + + +P + ++ + ES + +QQ+DYK P ++ W+
Sbjct: 220 NDEPLPPEYGFPVRVVVPGVAGARWVKWLDRITVQADESPNFYQQHDYKVLPPEASTWEL 279
Query: 278 V-DFAKS-PAIQELPVISAICLPVADAKLKL-ENHQMEVQGYAWSGGGKA-IVRVDVTID 333
D+ K+ P+IQE+PV S + P +KL + +EV+G+A G + IVRV+V+ D
Sbjct: 280 AEDYWKTVPSIQEMPVNSVVACPDDGDTIKLSSDGCIEVKGFAVPAGSQGPIVRVEVSTD 339
Query: 334 QGRTWHVANFTGQDSQAPLTRHWGWTLWR 362
G W A Q+ W WTLW+
Sbjct: 340 GGENWVDAELQDDKPQS----KWSWTLWK 364
>gi|67902142|ref|XP_681327.1| hypothetical protein AN8058.2 [Aspergillus nidulans FGSC A4]
gi|40740490|gb|EAA59680.1| hypothetical protein AN8058.2 [Aspergillus nidulans FGSC A4]
gi|259480815|tpe|CBF73801.1| TPA: sulfite oxidase, putative (AFU_orthologue; AFUA_5G02190)
[Aspergillus nidulans FGSC A4]
Length = 380
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 249 KVILSDHESTSHWQQNDYKGF-SPSTDWDTVD--FAKSPAIQELPVISAICLPVADAKLK 305
++ + D EST+ +Q+ DYK + + D + + ++PAI E+ + S + +P + +
Sbjct: 207 RITVQDQESTNFYQRRDYKVLPEEAVNRDAAEPFWDQTPAISEISINSVVAVPEDNETVY 266
Query: 306 LEN-HQMEVQGYAW-SGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAP--LTRHWGWTLW 361
L + ++EV+GYA G G +V+V V+ D GRTW A +S R W W LW
Sbjct: 267 LSDVGKLEVKGYAVPQGSGGPVVKVQVSGDGGRTWIDAEIGKSESAGADGRVRKWCWVLW 326
Query: 362 RATIPVD 368
R + V+
Sbjct: 327 RVEVEVE 333
>gi|284448075|gb|ADB89105.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284448097|gb|ADB89114.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 63.2 bits (152), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 286 IQELPVISAICLPVADAKLKLENHQME--VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I +L + SAI P D + + Q +GYA+SGGG+ + RV+++ D+G TW +
Sbjct: 11 INDLNINSAITSPAHDEVVTISTRQATYTCKGYAYSGGGRKVTRVELSFDEGETWELTTL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKK 384
T + +HW W W +P IM ML K+
Sbjct: 71 THPERPTRAGKHWCWCFWEYEVP---------IMRMLRAKQ 102
>gi|294782920|ref|ZP_06748246.1| poly(A) polymerase [Fusobacterium sp. 1_1_41FAA]
gi|294481561|gb|EFG29336.1| poly(A) polymerase [Fusobacterium sp. 1_1_41FAA]
Length = 451
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
+DG V D +NG +D++ V FVG+ RI ED LRILR FRF +R+ + + E +
Sbjct: 134 VDGIV-DLYNGQKDIENKVINFVGNAEERIVEDPLRILRAFRFMSRLGFSLS---ENTIE 189
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
AIK D L +I ERI E +K+L G K + M
Sbjct: 190 AIKKQKDLLKSIPEERITIEFSKLLLGENVKNTLTAM 226
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKE 429
+I D+L+G KP DIDF TN + +K +F+E + E G+ G + R+ND E
Sbjct: 32 AIRDILLGLKPKDIDFTTNLPYETLKDLFSEYNPK---ETGKAFGVLRIRVNDTE 83
>gi|284448101|gb|ADB89116.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 63.2 bits (152), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 286 IQELPVISAICLPVADAKLKLENHQME--VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I +L + SAI P D + + Q +GYA+SGGG+ + RV+++ D+G TW +
Sbjct: 11 INDLNINSAITSPAHDEVVTISTRQATYTCKGYAYSGGGRKVTRVELSFDEGETWELTTL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKK 384
T + +HW W W +P IM ML K+
Sbjct: 71 THPERPTRAGKHWCWCFWEYEVP---------IMRMLRAKQ 102
>gi|284448069|gb|ADB89102.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284448073|gb|ADB89104.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284448093|gb|ADB89112.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284448112|gb|ADB89121.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 63.2 bits (152), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 286 IQELPVISAICLPVADAKLKLENHQME--VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I +L + SAI P D + + Q +GYA+SGGG+ + RV+++ D+G TW +
Sbjct: 11 INDLNINSAITSPAHDEVVTISTRQATYTCKGYAYSGGGRKVTRVELSFDEGETWELTTL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKK 384
T + +HW W W +P IM ML K+
Sbjct: 71 THPERPTRAGKHWCWCFWEYEVP---------IMRMLRAKQ 102
>gi|284448103|gb|ADB89117.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 63.2 bits (152), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 286 IQELPVISAICLPVADAKLKLENHQME--VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I +L + SAI P D + + Q +GYA+SGGG+ + RV+++ D+G TW +
Sbjct: 11 INDLNINSAITSPAHDEVVTISTRQATYTCKGYAYSGGGRKVTRVELSFDEGETWELTTL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKK 384
T + +HW W W +P IM ML K+
Sbjct: 71 THPERPTRAGKHWCWCFWEYEVP---------IMRMLRAKQ 102
>gi|284448008|gb|ADB89073.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 63.2 bits (152), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 286 IQELPVISAICLPVADAKLKLENHQME--VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I +L + SAI P D + + Q +GYA+SGGG+ + RV+++ D+G TW +
Sbjct: 11 INDLNINSAITSPAHDEVVTISTRQATYTCKGYAYSGGGRKVTRVELSFDEGETWELTTL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKK 384
T + +HW W W +P IM ML K+
Sbjct: 71 THPERPTRAGKHWCWCFWEYEVP---------IMRMLRAKQ 102
>gi|284448095|gb|ADB89113.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284448099|gb|ADB89115.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284448126|gb|ADB89128.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 63.2 bits (152), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 286 IQELPVISAICLPVADAKLKLENHQME--VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I +L + SAI P D + + Q +GYA+SGGG+ + RV+++ D+G TW +
Sbjct: 11 INDLNINSAITSPAHDEVVTISTRQATYTCKGYAYSGGGRKVTRVELSFDEGETWELTTL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKK 384
T + +HW W W +P IM ML K+
Sbjct: 71 THPERPTRAGKHWCWCFWEYEVP---------IMRMLRAKQ 102
>gi|225386499|ref|ZP_03756263.1| hypothetical protein CLOSTASPAR_00246 [Clostridium asparagiforme
DSM 15981]
gi|225047418|gb|EEG57664.1| hypothetical protein CLOSTASPAR_00246 [Clostridium asparagiforme
DSM 15981]
Length = 401
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 642 KDRSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI 694
K R F ++ Y D F G EDL++G+ VG+P+ R ED LRILR RF A++
Sbjct: 110 KRRDFTINAMAYNKATGFVDEFGGVEDLRRGIIRCVGEPMDRFTEDALRILRAIRFSAQL 169
Query: 695 CNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMML 742
+E + I N L +S ER+ EL K+L + + + L
Sbjct: 170 GFEIEERTQEAIRVIAPN---LAKVSKERVQVELTKLLCSAHPERIAL 214
>gi|149183107|ref|ZP_01861558.1| tRNA nucleotidyltransferase [Bacillus sp. SG-1]
gi|148849184|gb|EDL63383.1| tRNA nucleotidyltransferase [Bacillus sp. SG-1]
Length = 395
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 91/218 (41%), Gaps = 34/218 (15%)
Query: 534 ENGHPSGYQPRATLQGAR--LLTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLA 591
E +GYQ R LL RP N + + P E F +
Sbjct: 16 EKLEEAGYQAYFVGGAVRDLLLNRPTNDIDIATSALPQ--------EVKGVFPKTID--V 65
Query: 592 GIFEKHGYQLRIAGEGTVTAKVLSYRNRREKEDR-----------IGENQPFRKLTLSVQ 640
GI +HG + I E ++ ++R+ E +D + E+ R T++
Sbjct: 66 GI--EHGTVVVIYNE--TPYEITTFRSEEEYKDHRRPESVTFIKSLKEDLQRRDFTINAI 121
Query: 641 DKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNN 700
DRS GT++D F G D+K VG R +ED LR++R RF A++ N
Sbjct: 122 AMDRS----GTIHDPFGGEVDIKAKTIRTVGSADERFKEDALRMMRAVRFMAQLGFKMEN 177
Query: 701 HKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSK 738
+ +IK N + L I+ ER+ E K+LGG F K
Sbjct: 178 ---DTFESIKRNGNTLKYIAVERLSAEFEKLLGGRFKK 212
>gi|365901821|ref|ZP_09439647.1| putative poly(A) polymerase [Bradyrhizobium sp. STM 3843]
gi|365417431|emb|CCE12189.1| putative poly(A) polymerase [Bradyrhizobium sp. STM 3843]
Length = 417
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
S DG ++DY G D+ F+GDP RI EDYLRILR+FR A + + ++
Sbjct: 130 SVSADGIIHDYVGGLADIAARRVRFIGDPAQRIAEDYLRILRFFRIHAAFGHGEPD-RDG 188
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKIL 732
L+ I GL +S ER+ E+ K++
Sbjct: 189 YLACIAARA-GLATLSAERVRMEMLKLV 215
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR+D T GR A+V+F DW DA+RRD T+N++
Sbjct: 93 VTTLRLDTETFGRKAKVEFGRDWVGDAHRRDFTMNAL 129
>gi|414343027|ref|YP_006984548.1| poly(A) polymerase [Gluconobacter oxydans H24]
gi|411028362|gb|AFW01617.1| poly(A) polymerase [Gluconobacter oxydans H24]
Length = 401
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ DR + + DYF+G EDL FVG+ RI+ED LR LR+
Sbjct: 113 EDAARRDFTINAMSLDR----NDVLSDYFHGVEDLAAHRVRFVGEAGRRIEEDALRALRF 168
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGG 734
FRF AR + + E AI L + +S ER+ +E +IL G
Sbjct: 169 FRFDARYGDGAPD--AEACQAISQRLTLIDTLSAERVASEFLRILTG 213
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
ITTLR D TDGRHA V +TE+W+ DA RRD T+N+M L
Sbjct: 89 ITTLRRDEETDGRHAVVAWTENWEEDAARRDFTINAMSL 127
>gi|295687827|ref|YP_003591520.1| Polynucleotide adenylyltransferase region [Caulobacter segnis ATCC
21756]
gi|295429730|gb|ADG08902.1| Polynucleotide adenylyltransferase region [Caulobacter segnis ATCC
21756]
Length = 416
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 649 DGTVYD-YFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRF---FARICNNPNNHKEE 704
+GTVYD G ED + G FVGDP++RI+EDYLRILR+FRF + R+ P+
Sbjct: 136 EGTVYDPVGQGVEDARAGRVVFVGDPMTRIREDYLRILRFFRFQAWYGRL--EPDAEALA 193
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKIL 732
+A+K+ L G + ERI EL K L
Sbjct: 194 ACAALKDMLLGG---TAERIQKELMKTL 218
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 838 KILGGSFSKEMMLKMLE-INMFPHLGTDETFATLDFEGLFRSMPI-----PFTLLFSANF 891
+ +GG +M K ++ I++ L D+T ++ GL R++P T L
Sbjct: 34 RFVGGCVRNTLMGKPVDDIDIATTLTPDQTIEAIEQAGL-RAVPTGVEHGTVTALSGGRP 92
Query: 892 FRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
F +TTLR DV TDGR A V FT DW DA RRD N+++
Sbjct: 93 FE----VTTLRRDVATDGRRAVVAFTHDWGEDAQRRDFRFNALY 132
>gi|84685765|ref|ZP_01013661.1| polyA polymerase family protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84665858|gb|EAQ12332.1| polyA polymerase family protein [Rhodobacterales bacterium
HTCC2654]
Length = 387
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG + D G +DL F+ D RI+EDYLRILR+FRF+A + + L+A
Sbjct: 133 DGQIIDPLGGLQDLLARKVRFIDDAHDRIREDYLRILRFFRFYAWYGDADAGLDPDALTA 192
Query: 709 IKNNLDGLHNISGERIWTELNKILGG 734
I +G+ +S ER+ +E+ K+L
Sbjct: 193 ISELSEGIDTLSRERVGSEVVKLLAA 218
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R DV TDGR A V F + + DA RRD T+N+++
Sbjct: 92 VTTWRKDVETDGRRAVVAFADRLEDDARRRDFTMNALY 129
>gi|339624744|ref|ZP_08660533.1| tRNA nucleotidyltransferase/poly(A) polymerase [Fructobacillus
fructosus KCTC 3544]
Length = 400
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D FNG DL+K VGD R ED LR++R RF +++ E L A
Sbjct: 128 DGQVIDLFNGLGDLEKKQIRAVGDAKERFTEDALRMMRALRFASKLDFTIEEKTLEALEA 187
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
+ NL+ I+ ERI E K+L G + + +L M+ +LL
Sbjct: 188 LAPNLE---KIAVERIQVEFEKMLMGQAAGQALLTMVEVDLL 226
>gi|403515134|ref|YP_006655954.1| tRNA CCA-pyrophosphorylase [Lactobacillus helveticus R0052]
gi|403080572|gb|AFR22150.1| tRNA CCA-pyrophosphorylase [Lactobacillus helveticus R0052]
Length = 399
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
L G + D FNG EDLK + VGDP R ED LR++R RF +++ N E+
Sbjct: 128 LHGQIVDLFNGVEDLKNHIIRAVGDPEKRFHEDALRMMRAVRFTSQLKFNLEEKTEQ--- 184
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKE 739
AIK+N + L IS ERI E K+ G S++
Sbjct: 185 AIKDNHELLKKISVERIREEFVKMGIGPHSRQ 216
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEV 433
S+ D+L+ + HD+D T+A P+++K +FA+ + G KHGTV + E++E+
Sbjct: 34 SVRDLLLDRHVHDVDITTSAYPEEVKELFAKSI-----DTGIKHGTVTV-LYGGESYEI 86
>gi|416084684|ref|ZP_11587068.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype b
str. I23C]
gi|348010342|gb|EGY50396.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype b
str. I23C]
Length = 425
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI---CNNPNNHKEEV 705
D T+ DYFNG EDLK G +GDPV+R QED +R+LR RF A++ + P+ +
Sbjct: 132 DNTLKDYFNGIEDLKNGKLRLIGDPVTRYQEDPVRMLRSIRFMAKLEMFLDKPSEAPIKE 191
Query: 706 LSAIKNNLDGLHNISGERIWTELNKILGG 734
LS + L NI R++ E K+L G
Sbjct: 192 LSHL------LKNIPSARLFEESLKLLQG 214
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEE 406
+ D+L+GKKP D D ATNA P+Q++A+F +
Sbjct: 26 CLRDLLLGKKPKDFDVATNARPEQIQAVFQRQ 57
>gi|365967695|ref|YP_004949257.1| polyA polymerase [Aggregatibacter actinomycetemcomitans ANH9381]
gi|416074936|ref|ZP_11584784.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
gi|444344104|ref|ZP_21152419.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
gi|444348165|ref|ZP_21155890.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype b
str. S23A]
gi|348006551|gb|EGY46960.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
gi|365746608|gb|AEW77513.1| polyA polymerase [Aggregatibacter actinomycetemcomitans ANH9381]
gi|443544742|gb|ELT54675.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
gi|443547631|gb|ELT57092.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype b
str. S23A]
Length = 432
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI---CNNPNNHKEEV 705
D T+ DYFNG EDLK G +GDPV+R QED +R+LR RF A++ + P+ +
Sbjct: 139 DNTLKDYFNGIEDLKNGKLRLIGDPVTRYQEDPVRMLRSIRFMAKLEMFLDKPSEAPIKE 198
Query: 706 LSAIKNNLDGLHNISGERIWTELNKILGG 734
LS + L NI R++ E K+L G
Sbjct: 199 LSHL------LKNIPSARLFEESLKLLQG 221
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEE 406
+ D+L+GKKP D D ATNA P+Q++A+F +
Sbjct: 33 CLRDLLLGKKPKDFDVATNARPEQIQAVFQRQ 64
>gi|284448055|gb|ADB89096.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284448071|gb|ADB89103.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284448108|gb|ADB89119.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284448114|gb|ADB89122.1| assimilatory nitrate reductase [uncultured eukaryote]
gi|284448116|gb|ADB89123.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 63.2 bits (152), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 286 IQELPVISAICLPVADAKLKLENHQME--VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I +L + SAI P D + + Q +GYA+SGGG+ + RV+++ D+G TW +
Sbjct: 11 INDLNINSAITSPAHDEVVTISTRQATYTCKGYAYSGGGRKVTRVELSFDEGETWELTTL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKK 384
T + +HW W W +P IM ML K+
Sbjct: 71 THPERPTRAGKHWCWCFWEYEVP---------IMRMLRAKQ 102
>gi|302875215|ref|YP_003843848.1| Polynucleotide adenylyltransferase region [Clostridium
cellulovorans 743B]
gi|307688896|ref|ZP_07631342.1| Polynucleotide adenylyltransferase region [Clostridium
cellulovorans 743B]
gi|302578072|gb|ADL52084.1| Polynucleotide adenylyltransferase region [Clostridium
cellulovorans 743B]
Length = 454
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 14/127 (11%)
Query: 634 KLTLSVQD--KDRSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRI 684
K T S+++ K R + ++ Y DYFNG ED+ K + VG+P R++ED LR+
Sbjct: 108 KFTKSLEEDLKRRDYTINAMAYNDKVGLVDYFNGQEDIDKKLIRAVGEPKKRLEEDALRM 167
Query: 685 LRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
LR RF A++ E + A+ N + +S ERI E NKIL + + L
Sbjct: 168 LRAHRFSAQLGFKIEKETSEAIKALSVN---IRQVSIERIREEFNKILLS--NNLVQLFQ 222
Query: 745 LYQNLLL 751
LY+N LL
Sbjct: 223 LYENGLL 229
>gi|423092496|ref|ZP_17080300.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Clostridium difficile 70-100-2010]
gi|357553998|gb|EHJ35734.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Clostridium difficile 70-100-2010]
Length = 445
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D FNG+ED++ VG+PV R +ED LR+LR RF A++
Sbjct: 113 RDFTINSIAYNSKTGLVDPFNGYEDIQNKYIRCVGNPVDRFEEDALRMLRAVRFSAQL-- 170
Query: 697 NPNNHK--EEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLK 743
N K E +I D + N+S ERI TE NKIL SK +LK
Sbjct: 171 ---NFKIAEGTKQSIHKKADLIKNVSIERIQTEFNKILVSDSSKLNLLK 216
>gi|340752187|ref|ZP_08688994.1| Poly(A) polymerase [Fusobacterium sp. 2_1_31]
gi|229422001|gb|EEO37048.1| Poly(A) polymerase [Fusobacterium sp. 2_1_31]
Length = 451
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
Query: 612 KVLSYRNRREKEDRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVG 671
K++ N+ + D I E+ R +++ + + DG V D +NG +D++ V FVG
Sbjct: 101 KIVPEDNKVDFVDDIKEDLARRDFSINAMAYNEA---DGIV-DLYNGQKDIENKVINFVG 156
Query: 672 DPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKI 731
+ RI ED LRILR FRF +R+ + + E + AIK D L +I ERI E +K+
Sbjct: 157 NAEERIIEDPLRILRAFRFMSRLGFSSS---ENTIEAIKKQKDLLKSIPEERITMEFSKL 213
Query: 732 LGGSFSKEMMLKM 744
L G K + M
Sbjct: 214 LLGENVKNTLTAM 226
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMND 427
SI D+L+G KP DIDF TN + +K +F+E + E G+ G + R+N+
Sbjct: 32 SIRDILLGLKPKDIDFTTNIPYETLKDLFSEYNPK---ETGKAFGVLRIRVNE 81
>gi|145351102|ref|XP_001419925.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580158|gb|ABO98218.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 375
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++ ++D ES + + ND + P D + F I +L + AI P +
Sbjct: 226 EIKVTDRESNNFYHFNDNRVLPPPVDAERATEEGWWFKPEFIINQLNINGAIAYPAPEEV 285
Query: 304 LKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQD-------SQAPLTRHW 356
+ +GYA+SGGG+ ++R +++ DQG +W +++ ++ S RHW
Sbjct: 286 IPKSQKTYAFKGYAYSGGGRKVIRAELSFDQGLSWELSDIHTREEPRWADFSSGDKARHW 345
Query: 357 GWTLWRATIPVD 368
W +W +P++
Sbjct: 346 CWCMWTLEVPIE 357
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 24/46 (52%)
Query: 420 TVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK G +WG A+GN WTG L +L AGI
Sbjct: 95 VVCAGNRRKEQNLVKSSIGFSWGPCAIGNTYWTGVPLRVLLNRAGI 140
>gi|284447993|gb|ADB89066.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 63.2 bits (152), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 286 IQELPVISAICLPVADAKLKLENHQME--VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I +L + SAI P D + + Q +GYA+SGGG+ + RV+++ D+G TW +
Sbjct: 11 INDLNINSAITSPAHDEVVTISTRQATYTCKGYAYSGGGRKVTRVELSFDEGETWELTTL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKK 384
T + +HW W W +P IM ML K+
Sbjct: 71 THPERPTRAGKHWCWCFWEYEVP---------IMRMLRAKQ 102
>gi|284447980|gb|ADB89060.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 63.2 bits (152), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 286 IQELPVISAICLPVADAKLKLENHQME--VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I +L + SAI P D + + Q +GYA+SGGG+ + RV+++ D+G TW +
Sbjct: 11 INDLNINSAITSPAHDEVVTISTRQATYTCKGYAYSGGGRKVTRVELSFDEGETWELTTL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKK 384
T + +HW W W +P IM ML K+
Sbjct: 71 THPERPTRAGKHWCWCFWEYEVP---------IMRMLRAKQ 102
>gi|456357122|dbj|BAM91567.1| poly(A) polymerase [Agromonas oligotrophica S58]
Length = 416
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V+D+ G D++ F+GDP RI EDYLRILR+FR + + + ++ L+
Sbjct: 133 DGVVHDHVGGLADIEARRVRFIGDPAQRIAEDYLRILRFFRIHSAFGHGEPD-RDGYLAC 191
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
I GL +S ERI E+ K+L
Sbjct: 192 IAGRA-GLATLSAERIRMEMLKLL 214
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLR D T GR A+V+F DW DA+RRD T+N++ +G
Sbjct: 92 VTTLREDAETFGRKAKVEFGRDWIGDAHRRDFTINALSVG 131
>gi|339505630|ref|YP_004693050.1| poly A polymerase-like protein [Roseobacter litoralis Och 149]
gi|338759623|gb|AEI96087.1| poly A polymerase-like protein [Roseobacter litoralis Och 149]
Length = 392
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 44/83 (53%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D +G +D F+ DP RI+EDYLRILR+FRF A + + L AI
Sbjct: 139 GQLVDPLHGMQDCLNRRVRFIEDPQKRIREDYLRILRFFRFHAWYADPDAGFDPDALDAI 198
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
N L +S ERI E+ K+L
Sbjct: 199 AQNTARLAQLSAERIGAEMMKLL 221
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TT R D +TDGR+A V F+ D + DA RRD T+N+++
Sbjct: 97 VTTFRSDTSTDGRYAVVCFSTDIREDARRRDFTMNALY 134
>gi|161507464|ref|YP_001577418.1| tRNA CCA-pyrophosphorylase [Lactobacillus helveticus DPC 4571]
gi|385813933|ref|YP_005850326.1| tRNA nucleotidyltransferase [Lactobacillus helveticus H10]
gi|172048281|sp|A8YV39.1|CCA_LACH4 RecName: Full=CCA-adding enzyme; AltName: Full=CCA tRNA
nucleotidyltransferase; AltName: Full=tRNA
CCA-pyrophosphorylase; AltName: Full=tRNA
adenylyl-/cytidylyl- transferase; AltName: Full=tRNA
nucleotidyltransferase; AltName: Full=tRNA-NT
gi|160348453|gb|ABX27127.1| tRNA nucleotidyltransferase [Lactobacillus helveticus DPC 4571]
gi|323466652|gb|ADX70339.1| tRNA nucleotidyltransferase [Lactobacillus helveticus H10]
Length = 399
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
L G + D FNG EDLK + VGDP R ED LR++R RF +++ N E+
Sbjct: 128 LHGQIVDLFNGVEDLKNHIIRAVGDPEKRFHEDALRMMRAVRFTSQLKFNLEEKTEQ--- 184
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKE 739
AIK+N + L IS ERI E K+ G S++
Sbjct: 185 AIKDNHELLKKISVERIREEFVKMGIGPHSRQ 216
>gi|307104437|gb|EFN52691.1| nitrate reductase [Chlorella variabilis]
Length = 862
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 275 WDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQ 334
W DF I +L V SAI P + + L V+GYA+ G G I+R +V++D
Sbjct: 323 WYNPDFI----INDLNVQSAIGYPAHEEVVPLAAGAYAVRGYAYCGNGDKIIRCEVSLDD 378
Query: 335 GRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367
G++W +A T +HW W W IP+
Sbjct: 379 GKSWRLAGVTHSTPPTAYGKHWAWVWWSIDIPI 411
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI-SPDQSLDSADVQHV 479
CA KE VK G WG A +TWTG RL +VL+ + SP+Q +
Sbjct: 164 TCAGNRRKEENMVKQTIGFNWGPAGTSCSTWTGVRLSEVLQRCSVKSPEQGAHHVCFRGP 223
Query: 480 HVEIWSKAVDSSYNT 494
E+ K D SY T
Sbjct: 224 KGEL-PKGDDGSYGT 237
>gi|291548183|emb|CBL21291.1| uncharacterized domain HDIG [Ruminococcus sp. SR1/5]
Length = 446
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 21/142 (14%)
Query: 607 GTVTA-------KVLSYRNRREKEDRIGENQPFRKLTLSVQD--KDRSFRLDGTVY---- 653
GTVT +V +YR E D G + T S+++ K R F ++ Y
Sbjct: 68 GTVTVMMGKEGFEVTTYRVDGEYHD--GRHPDAVTFTRSLEEDLKRRDFTINAMAYHPGH 125
Query: 654 ---DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIK 710
D F G ED+ + + VGDPV R ED LR+LR RF A++ + + L+ +
Sbjct: 126 GLVDLFGGMEDINRKIIRCVGDPVERFTEDALRMLRAVRFSAQLGFTVEENTKAALARMS 185
Query: 711 NNLDGLHNISGERIWTELNKIL 732
NL+ ++S ERI TEL K+L
Sbjct: 186 GNLE---HVSAERIQTELVKLL 204
>gi|254976061|ref|ZP_05272533.1| putative poly(A) polymerase [Clostridium difficile QCD-66c26]
gi|255093452|ref|ZP_05322930.1| putative poly(A) polymerase [Clostridium difficile CIP 107932]
gi|255315194|ref|ZP_05356777.1| putative poly(A) polymerase [Clostridium difficile QCD-76w55]
gi|255517863|ref|ZP_05385539.1| putative poly(A) polymerase [Clostridium difficile QCD-97b34]
gi|255650979|ref|ZP_05397881.1| putative poly(A) polymerase [Clostridium difficile QCD-37x79]
gi|384361690|ref|YP_006199542.1| poly(A) polymerase [Clostridium difficile BI1]
Length = 445
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D FNG+ED++ VG+PV R +ED LR+LR RF A++
Sbjct: 113 RDFTINSIAYNSKTGLVDPFNGYEDIQNKYIRCVGNPVDRFEEDALRMLRAVRFSAQL-- 170
Query: 697 NPNNHK--EEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLK 743
N K E +I D + N+S ERI TE NKIL SK +LK
Sbjct: 171 ---NFKIAEGTKQSIHKKADLIKNVSIERIQTEFNKILVSDSSKLNLLK 216
>gi|261417981|ref|YP_003251663.1| tRNA CCA-pyrophosphorylase [Geobacillus sp. Y412MC61]
gi|319767207|ref|YP_004132708.1| polynucleotide adenylyltransferase region protein [Geobacillus sp.
Y412MC52]
gi|261374438|gb|ACX77181.1| Polynucleotide adenylyltransferase region [Geobacillus sp.
Y412MC61]
gi|317112073|gb|ADU94565.1| Polynucleotide adenylyltransferase region protein [Geobacillus sp.
Y412MC52]
Length = 404
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 106/235 (45%), Gaps = 18/235 (7%)
Query: 596 KHGYQLRIAGEGTVTAKVLSYRNRREKED-RIGENQPFRKLTLSVQDKDRSFRLD----- 649
KHG + + EGT +V ++R + ED R E+ F + +L K R F ++
Sbjct: 65 KHGTVV-VVHEGTAY-EVTTFRTDGDYEDHRRPESVTFVR-SLEEDLKRRDFTMNAIAMD 121
Query: 650 --GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
GT+ D F G E +++ + VG R +ED LR++R RF +++ E+ S
Sbjct: 122 ERGTIIDPFGGQEAIERRLICTVGAADERFREDALRMMRAVRFVSQLG---FALAEDTKS 178
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVEL 767
AI N + +IS ER+ E+ K+L G F E + L + LF+ L +E ++
Sbjct: 179 AIVQNAPLMAHISVERMTMEMEKLLAGPFVAEAL--PLLADTGLFAYLPGLAAKEQLLRS 236
Query: 768 MKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVLSAIKKNLD 822
L K +W L ++ IR F R PN +E AI LD
Sbjct: 237 AAAFRWPWLTKREERWALLCRALDVKDIRPFL-RAWKLPNKVIDEA-GAILAALD 289
>gi|58337270|ref|YP_193855.1| tRNA CCA-pyrophosphorylase [Lactobacillus acidophilus NCFM]
gi|227903855|ref|ZP_04021660.1| tRNA CCA-pyrophosphorylase [Lactobacillus acidophilus ATCC 4796]
gi|73619782|sp|Q5FKF0.1|CCA_LACAC RecName: Full=CCA-adding enzyme; AltName: Full=CCA tRNA
nucleotidyltransferase; AltName: Full=tRNA
CCA-pyrophosphorylase; AltName: Full=tRNA
adenylyl-/cytidylyl- transferase; AltName: Full=tRNA
nucleotidyltransferase; AltName: Full=tRNA-NT
gi|58254587|gb|AAV42824.1| tRNA nucleotidyltransferase, polyA polymerase polyA [Lactobacillus
acidophilus NCFM]
gi|227868742|gb|EEJ76163.1| tRNA CCA-pyrophosphorylase [Lactobacillus acidophilus ATCC 4796]
Length = 399
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D FNG EDLKK V VG+P +R ED LR++R RF +++ +E+ AI
Sbjct: 130 GQIIDLFNGVEDLKKRVIRAVGNPETRFHEDALRMMRAVRFMSQL---EFKLEEKTERAI 186
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKE 739
K+N + L IS ERI E K+ GS S++
Sbjct: 187 KDNHELLKKISIERIREEFVKMGLGSHSRQ 216
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEV 433
S+ D+L+ + HDID T+A P+++K +F E+ + T G KHGTV + + E++E+
Sbjct: 34 SVRDVLLDRHVHDIDITTSAYPEEVKELF-EKSIDT----GIKHGTVTV-LYEGESYEI 86
>gi|406918016|gb|EKD56671.1| hypothetical protein ACD_58C00122G0008 [uncultured bacterium]
Length = 446
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 644 RSFRLDGTVYD--------YFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R F ++G YD Y G EDLK + F+G+P +RI+ED+LRI+R RF +
Sbjct: 107 RDFTINGMFYDPINKKVIDYVGGQEDLKNKIIKFIGNPTNRIKEDHLRIIRAIRFKNVLG 166
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
+ + E AI NN + ++S ERI ELNK+L
Sbjct: 167 FSFDKRTYE---AIINNSYLIESVSYERIRDELNKML 200
>gi|374573733|ref|ZP_09646829.1| tRNA nucleotidyltransferase/poly(A) polymerase [Bradyrhizobium sp.
WSM471]
gi|374422054|gb|EHR01587.1| tRNA nucleotidyltransferase/poly(A) polymerase [Bradyrhizobium sp.
WSM471]
Length = 418
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLS 707
DG V+DY G D F+GDP RI ED+LRILR+FR A +P+ ++ L+
Sbjct: 135 DGVVHDYVGGIADAAARRVRFIGDPDQRIAEDFLRILRFFRIHAAFGAGDPD--RDGYLA 192
Query: 708 AIKNNLDGLHNISGERIWTELNKIL 732
I+ GL ++S ER+ E+ K+L
Sbjct: 193 CIRGRA-GLASLSAERLRMEMLKLL 216
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
+TTLR D T GR A+V F DW DA RRD T+N +
Sbjct: 94 VTTLREDTETFGRKAKVAFGRDWVKDAERRDFTMNGL 130
>gi|284448118|gb|ADB89124.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 63.2 bits (152), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 286 IQELPVISAICLPVADAKLKLENHQME--VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I +L + SAI P D + + Q +GYA+SGGG+ + RV+++ D+G TW +
Sbjct: 11 INDLNINSAITSPAHDEVVTISTRQATYTCKGYAYSGGGRKVTRVELSFDEGETWELTTL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPV 367
T + +HW W W +P+
Sbjct: 71 THPERPTRAGKHWCWCFWEYEVPI 94
>gi|284448022|gb|ADB89080.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 129
Score = 62.8 bits (151), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 286 IQELPVISAICLPVADAKLKLENHQME--VQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343
I +L + SAI P D + + Q +GYA+SGGG+ + RV+++ D+G TW +
Sbjct: 11 INDLNINSAITSPAHDEVVTISTRQATYTCKGYAYSGGGRKVTRVELSFDEGETWELTTL 70
Query: 344 TGQDSQAPLTRHWGWTLWRATIPV 367
T + +HW W W +P+
Sbjct: 71 THPERPTRAGKHWCWCFWEYEVPI 94
>gi|260684047|ref|YP_003215332.1| poly(A) polymerase [Clostridium difficile CD196]
gi|260687707|ref|YP_003218841.1| poly(A) polymerase [Clostridium difficile R20291]
gi|260210210|emb|CBA64432.1| putative poly(A) polymerase [Clostridium difficile CD196]
gi|260213724|emb|CBE05620.1| putative poly(A) polymerase [Clostridium difficile R20291]
Length = 470
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D FNG+ED++ VG+PV R +ED LR+LR RF A++
Sbjct: 138 RDFTINSIAYNSKTGLVDPFNGYEDIQNKYIRCVGNPVDRFEEDALRMLRAVRFSAQL-- 195
Query: 697 NPNNHK--EEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLK 743
N K E +I D + N+S ERI TE NKIL SK +LK
Sbjct: 196 ---NFKIAEGTKQSIHKKADLIKNVSIERIQTEFNKILVSDSSKLNLLK 241
>gi|255101627|ref|ZP_05330604.1| putative poly(A) polymerase [Clostridium difficile QCD-63q42]
gi|255307496|ref|ZP_05351667.1| putative poly(A) polymerase [Clostridium difficile ATCC 43255]
Length = 445
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D FNG+ED++ VG+PV R +ED LR+LR RF A++
Sbjct: 113 RDFTINSIAYNSKTGLVDPFNGYEDIQNKYIHCVGNPVDRFEEDALRMLRAVRFSAQL-- 170
Query: 697 NPNNHK--EEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLK 743
N K E +I D + N+S ERI TE NKIL SK +LK
Sbjct: 171 ---NFKIAEGTKQSIHKKADLIKNVSIERIQTEFNKILVSDSSKLNLLK 216
>gi|317058679|ref|ZP_07923164.1| poly(a) polymerase [Fusobacterium sp. 3_1_5R]
gi|313684355|gb|EFS21190.1| poly(a) polymerase [Fusobacterium sp. 3_1_5R]
Length = 438
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 579 FHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTAKVLSYRNRREKEDRIGENQPFRKLTLS 638
F F E + G+ +LRI GE ++ S+R+ + + R E F K +
Sbjct: 59 FSKYFCIETGKAFGVL-----RLRIDGE---EFEIASFRSEKGSDGRRPEEVIFVK-RIE 109
Query: 639 VQDKDRSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFF 691
R F ++ Y DY++ +DL+ V F+G+P RIQED LRI+R FRF
Sbjct: 110 EDLARRDFSINAMAYNQEKGLLDYYDAQKDLENKVIRFIGNPRERIQEDGLRIMRAFRFM 169
Query: 692 ARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
+++ + ++ + AI + L I+ RI E NK++ G F E + +M
Sbjct: 170 SQLGFSLESNTK---KAIMEEREMLGKIAKSRITEEWNKLILGDFVVETLEEM 219
>gi|148677405|gb|EDL09352.1| cytochrome b-5, isoform CRA_a [Mus musculus]
Length = 98
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 13 AGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMK--AAGGSI 70
AG+ + +Y+L +IQ HKD KS+ WV+ VYD+T+F++ HPGGE +++ A G +
Sbjct: 2 AGQSDKDVKYYTLEEIQKHKDSKST-WVILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 60
Query: 71 EPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAK 107
E F V + EL ++Y IG + +D AK
Sbjct: 61 ENFE---DVGHSTDARELSKTYIIGELHPDDRSKIAK 94
>gi|297529649|ref|YP_003670924.1| polynucleotide adenylyltransferase region [Geobacillus sp. C56-T3]
gi|297252901|gb|ADI26347.1| Polynucleotide adenylyltransferase region [Geobacillus sp. C56-T3]
Length = 404
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 106/235 (45%), Gaps = 18/235 (7%)
Query: 596 KHGYQLRIAGEGTVTAKVLSYRNRREKED-RIGENQPFRKLTLSVQDKDRSFRLD----- 649
KHG + + EGT +V ++R + ED R E+ F + +L K R F ++
Sbjct: 65 KHGTVV-VVHEGTAY-EVTTFRTDGDYEDHRRPESVTFVR-SLEEDLKRRDFTMNAIAMD 121
Query: 650 --GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
GT+ D F G E +++ + VG R +ED LR++R RF +++ E+ S
Sbjct: 122 ERGTIIDPFGGQEAIERRLICTVGAADERFREDALRMMRAVRFVSQLG---FALAEDTKS 178
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVEL 767
AI N + +IS ER+ E+ K+L G F E + L + LF+ L +E ++
Sbjct: 179 AIVQNAPLMAHISVERMTMEMEKLLAGPFVAEAL--PLLADTGLFAYLPGLAAKEQLLRS 236
Query: 768 MKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVLSAIKKNLD 822
L K +W L ++ IR F R PN +E AI LD
Sbjct: 237 AAAFRWPWLTKREERWALLCRALDVKDIRPFL-RAWKLPNKVIDEA-GAILAALD 289
>gi|423084211|ref|ZP_17072716.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Clostridium difficile 002-P50-2011]
gi|423086732|ref|ZP_17075123.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Clostridium difficile 050-P50-2011]
gi|357543258|gb|EHJ25291.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Clostridium difficile 002-P50-2011]
gi|357545841|gb|EHJ27804.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Clostridium difficile 050-P50-2011]
Length = 470
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D FNG+ED++ VG+PV R +ED LR+LR RF A++
Sbjct: 138 RDFTINSIAYNSKTGLVDPFNGYEDIQNKYIRCVGNPVDRFEEDALRMLRAVRFSAQL-- 195
Query: 697 NPNNHK--EEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLK 743
N K E +I D + N+S ERI TE NKIL SK +LK
Sbjct: 196 ---NFKIAEGTKQSIHKKADLIKNVSIERIQTEFNKILVSDSSKLNLLK 241
>gi|1402636|dbj|BAA13047.1| nitrate reductase [Spinacia oleracea]
Length = 926
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 23/191 (12%)
Query: 207 YVMEPVRSPLL----KATSLKPYNAEPPPSMLYSSLLRIPFCSHTGKVILSDHESTSHWQ 262
+ M+P R +L L P + P M+ + ++I++ ES +++
Sbjct: 281 FAMDPARDIILAYMQNGEKLSPAHGYPV-RMIIPGFIGGRMVKWLKRIIVTTTESDNYYH 339
Query: 263 QNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAKLKLENHQME----V 313
D + D + + + + I EL V S I P + L + + +
Sbjct: 340 YKDNRVLPSHVDAELANSEAWWYKQEYIINELNVNSVITSPCHEEILPINAWTTQRPYTM 399
Query: 314 QGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKE 373
+GYA+SGGG+ + RV+VT+D G TW + Q+ + + W W W + E
Sbjct: 400 RGYAYSGGGRKVTRVEVTMDGGDTWDICELDHQERGSKYGKFWCWCFW---------SLE 450
Query: 374 VSIMDMLMGKK 384
V ++D+L K+
Sbjct: 451 VEVLDLLGAKE 461
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H + S W+V VY+ T F++ HPGG I++ A E F A++
Sbjct: 554 YSMSEVKKH-NTADSAWIVVHGNVYNATRFLKDHPGGSDSILINAGTDCTEEFDAIH--- 609
Query: 81 LQDEVFELLESYRIGNI 97
D+ LLE +RIG +
Sbjct: 610 -SDKAKRLLEDFRIGEL 625
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 22/45 (48%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE K G WG AAV + W G L DVLK G+
Sbjct: 203 VCAGNRRKEQNMTKQSIGFNWGSAAVSTSVWRGVPLRDVLKRCGV 247
>gi|325072513|gb|ADY76273.1| nitrate reductase, partial [Nemania serpens]
Length = 274
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 285 AIQELPVISAICLPVADAKLKLEN--HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
AI +L SAIC P + +L L+ H +V+GYA++GGGK I RV++T+D+G+TW +AN
Sbjct: 149 AIYDLNTNSAICYPAHNEELSLQGPAHAYKVRGYAYAGGGKRITRVELTLDKGKTWALAN 208
Query: 343 FTGQDSQAPLT 353
+ + Q L
Sbjct: 209 ISYPEDQYRLA 219
>gi|91975779|ref|YP_568438.1| polynucleotide adenylyltransferase region [Rhodopseudomonas
palustris BisB5]
gi|91682235|gb|ABE38537.1| Polynucleotide adenylyltransferase region [Rhodopseudomonas
palustris BisB5]
Length = 417
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKE 703
S DG V+D+ G D+ F+GDP RI EDYLRILR+FR A P ++
Sbjct: 130 SVSADGVVHDHVGGLADIAARRVRFIGDPDQRIAEDYLRILRFFRIHAAYGVGAPE--RD 187
Query: 704 EVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKM 744
L+ I+ GL +S ER+ E+ K++ + E ++ M
Sbjct: 188 GYLACIRGR-GGLSTLSAERMRMEMLKLMVAGGAAESVVAM 227
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 884 TLLFSANFFRNLARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSM 934
TL+ + F ITTLR DV T GR A+V F DW DA RRD T+N +
Sbjct: 83 TLVLDGHGFE----ITTLREDVETFGRKAKVAFGRDWVRDAQRRDFTINGL 129
>gi|449016151|dbj|BAM79553.1| nitrate reductase [Cyanidioschyzon merolae strain 10D]
Length = 951
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 250 VILSDHESTSHWQQNDYKGFSPSTDWDTVDFAK-----SPAIQELPVISAICLPVADAKL 304
V +SD ES +H+ D + P D + D K EL + SA+ P+ D L
Sbjct: 273 VEVSDRESQNHYHFFDNRIMPPHVDKERADSEKWWYRPEYLFNELNINSAVVRPLHDELL 332
Query: 305 KL----ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L E H ++GYA+SGGG+ + RV++T D G+ W++ R W W+
Sbjct: 333 PLHHASEQHSYRIEGYAYSGGGRPVTRVEITFDDGQLWNLCELRHPFEPNAAGRQWAWS 391
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGE--IIMKAAGGSIEPFWAMYGVH 80
Y+ + ++ H+ ++ +W+V R VYD+T ++ HPGG+ I+M A E F A++
Sbjct: 552 YTSAQVERHQS-ETDLWIVVRGRVYDVTRYLNEHPGGKAAIMMNAGQDCTEDFEAIH--- 607
Query: 81 LQDEVFELLESYRIGNIS 98
++ ++LL+ + IG ++
Sbjct: 608 -SEKAWKLLDDFYIGELA 624
>gi|126700083|ref|YP_001088980.1| tRNA-nucleotidyltransferase/Poly(A) polymerase family member
[Clostridium difficile 630]
gi|115251520|emb|CAJ69353.1| putative tRNA-nucleotidyltransferase/Poly(A) polymerase family
member [Clostridium difficile 630]
Length = 448
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D FNG+ED++ VG+PV R +ED LR+LR RF A++
Sbjct: 116 RDFTINSIAYNSKTGLVDPFNGYEDIQNKYIRCVGNPVDRFEEDALRMLRAVRFSAQL-- 173
Query: 697 NPNNHK--EEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLK 743
N K E +I D + N+S ERI TE NKIL SK +LK
Sbjct: 174 ---NFKIAEGTKQSIHKKADLIKNVSIERIQTEFNKILVSDSSKLNLLK 219
>gi|255084493|ref|XP_002508821.1| predicted protein [Micromonas sp. RCC299]
gi|226524098|gb|ACO70079.1| predicted protein [Micromonas sp. RCC299]
Length = 368
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
K+I++D ES + + ND + D + F I L + AI P +
Sbjct: 223 KIIVTDEESKNFYHFNDNRVLPVGVDAEKATAEGWWFKPEYIINNLNINGAIIHPQHEET 282
Query: 304 LKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQD-------SQAPLTRHW 356
L + ++GYA+SGGG+ ++R +V+ DQG++W +AN ++ S +HW
Sbjct: 283 LHAPMKKYTIKGYAYSGGGRKVIRAEVSFDQGQSWKLANINVREKPRWAAGSSGDKAKHW 342
Query: 357 GWTLWRATIPVD 368
W W + D
Sbjct: 343 CWCHWEIEVDAD 354
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 23/46 (50%)
Query: 420 TVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE +K G WG AAVGN W G L +L AGI
Sbjct: 92 VVCAGNRRKEQNMIKKSIGFNWGPAAVGNTYWKGVPLRIILNRAGI 137
>gi|189220183|ref|YP_001940823.1| tRNA nucleotidyltransferase/poly(A) polymerase [Methylacidiphilum
infernorum V4]
gi|189187041|gb|ACD84226.1| tRNA nucleotidyltransferase/poly(A) polymerase [Methylacidiphilum
infernorum V4]
Length = 443
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
L GT+ DY G ED++K +GDP R +ED+LR+LR RF R+ + +E+
Sbjct: 121 LTGTIIDYVGGSEDIEKKRIRAIGDPKIRFEEDHLRLLRAIRFAVRLGFSI---EEKTWE 177
Query: 708 AIKNNLDGLHNISGERIWTELNKILGG 734
AI+++ + IS ERI EL+KI G
Sbjct: 178 AIQSSAHKITQISPERIREELDKIFTG 204
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEE 406
+ D+L+ K+PHDID AT+ATPDQ++ +F E+
Sbjct: 25 CVRDILLKKEPHDIDIATSATPDQVQNLFKEK 56
>gi|417644240|ref|ZP_12294248.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Staphylococcus warneri VCU121]
gi|330684979|gb|EGG96654.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Staphylococcus epidermidis VCU121]
Length = 400
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 620 REKEDRIGENQP-----FRKLTLSVQDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAF 669
R +E+ I +P R L VQ +D + D +DYF+G +D+ G+
Sbjct: 85 RAEEEYIDHRRPSDVHFVRDLYEDVQRRDFTINAIAMDTDYQTFDYFSGEDDINNGIIRT 144
Query: 670 VGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELN 729
VG P R +ED LRILR RF +++ H +A+ N ++ + +S ERI EL
Sbjct: 145 VGQPTERFEEDALRILRGLRFQSQLNFKIEYH---TYNAMANQMEDIKYLSIERIIVELK 201
Query: 730 KILGGS 735
K++ G
Sbjct: 202 KLISGQ 207
>gi|114799278|ref|YP_759076.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Hyphomonas neptunium ATCC 15444]
gi|114739452|gb|ABI77577.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Hyphomonas neptunium ATCC 15444]
Length = 381
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 837 NKILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIPFTLLFSANFFRNL 895
++ +GGS + LK ++++ L ET A L+ G+ R +P F++ +
Sbjct: 12 SRYVGGSVRNTLRGLKAEDVDIATQLLPQETAAALEAAGI-RVIPTGIEHGTVTAFYKGV 70
Query: 896 -ARITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLGMK 939
ITTLR DV TDGR A V FT+DW DA RRD +N+++ G +
Sbjct: 71 PIEITTLRRDVETDGRRAVVAFTQDWAEDAARRDFRMNAIYAGAE 115
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 644 RSFRL-------DGTVYDYFNGH-EDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R FR+ +G +Y+ G +D G F+G+ R+ EDYLRILR++RF A
Sbjct: 103 RDFRMNAIYAGAEGELYEVIPGSIDDAIAGRVIFIGEGDQRLIEDYLRILRFYRFNAWYG 162
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
+ E+ A +GL I+ ERIW EL + L
Sbjct: 163 AGID---EDGQGACARQREGLRKIAAERIWKELKRTL 196
>gi|413924383|gb|AFW64315.1| hypothetical protein ZEAMMB73_314366 [Zea mays]
Length = 877
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+V+++ ES S++ D + D + + + I EL + S I P D
Sbjct: 277 RVVVASDESDSYYHYRDNRVLPSHVDAELANAEAWWYRPEYIINELNINSVITTPGHDEV 336
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GYA+SGGG+ + RV+VT+D G TW V + + ++W W
Sbjct: 337 LPINALTTQRPYTIKGYAYSGGGRKVTRVEVTLDGGETWQVCSLDHPERPTKYGKYWCWC 396
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + +V ++D+L K+ D A N P+++
Sbjct: 397 FW---------SVDVEVLDVLGAKEIAVRAWDEAMNTQPEKL 429
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
Y++S+++ HK S+ W+V +YD T F++ HPGG I++ A E F A++
Sbjct: 506 YTMSEVRRHKSPDSA-WIVVHGHIYDCTGFLKDHPGGADSILISAGTDCTEEFDAIH--- 561
Query: 81 LQDEVFELLESYRIGNISQEDSKLAAKDIASD 112
D+ LLE+YR+G + S + ++ +D
Sbjct: 562 -SDKARGLLETYRVGELVVTGSDYSPQNSHAD 592
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE V+ G WG AV + W GARL DVL+ G+
Sbjct: 157 VCAGNRRKEQNMVRQTVGFNWGPGAVSTSVWRGARLRDVLRRCGV 201
>gi|169335807|ref|ZP_02863000.1| hypothetical protein ANASTE_02233 [Anaerofustis stercorihominis DSM
17244]
gi|169258545|gb|EDS72511.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
[Anaerofustis stercorihominis DSM 17244]
Length = 439
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D F G +DL+KG+ VGD R +ED +RILR +RF R
Sbjct: 114 RDFTINAMAYNEKSGLIDLFEGRQDLEKGIIRVVGDGKERFKEDAIRILRAYRFMGRYDF 173
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
N+ L+AIK N+ L+N++ ERI E+ +I
Sbjct: 174 EIENN---TLNAIKENMHLLNNVAKERILPEIKEIF 206
>gi|126654221|ref|ZP_01726017.1| tRNA nucleotidyltransferase [Bacillus sp. B14905]
gi|126589303|gb|EAZ83459.1| tRNA nucleotidyltransferase [Bacillus sp. B14905]
Length = 392
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 87/191 (45%), Gaps = 24/191 (12%)
Query: 552 LLTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTA 611
LL RP + V + P+ E + F +R I +HG L I G V
Sbjct: 35 LLNRPAHDVDVATNALPE--------EVKTVF----QRTVDIGIQHGTVLVIVPAGPV-- 80
Query: 612 KVLSYRNRREKED--RIGENQPFRKLTLSVQDKDRSF-----RLDGTVYDYFNGHEDLKK 664
+V +YR E D R + Q R L +Q +D + R DG+ DY+ G +D+
Sbjct: 81 EVTTYRTDGEYTDHRRPDKVQFVRSLQDDLQRRDFTMNAIAMRRDGSFVDYYGGRQDIDL 140
Query: 665 GVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERI 724
+ VGD R ED LR+LR RF A++ E+ L AI++ + I+ ERI
Sbjct: 141 RIIRAVGDAQKRFAEDALRMLRAIRFSAQL---DFTIAEDTLMAIQHRAADIAFIAKERI 197
Query: 725 WTELNKILGGS 735
EL+K+ G+
Sbjct: 198 KAELDKLWLGT 208
>gi|422338557|ref|ZP_16419517.1| poly(A) polymerase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355371684|gb|EHG19027.1| poly(A) polymerase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 291
Score = 62.8 bits (151), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D +NG +D++ V FVG+ RI ED LR+LR FRF +R+
Sbjct: 122 RDFTINAMAYNEEEGIVDLYNGQKDIENKVINFVGNAEERIIEDPLRVLRAFRFMSRL-- 179
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL--LLFSK 754
+ E + AIK D L NI ERI E +K+L G K + M + L+ +
Sbjct: 180 -DFSLSENTIEAIKKQKDLLKNIPEERITMEFSKLLLGKNIKNTLTLMKDTGVLELIIPE 238
Query: 755 LKAT 758
KAT
Sbjct: 239 FKAT 242
>gi|227432250|ref|ZP_03914246.1| tRNA nucleotidyltransferase/poly(A) polymerase [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|227352023|gb|EEJ42253.1| tRNA nucleotidyltransferase/poly(A) polymerase [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 401
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
+ R DG V D F+G ED+KKGV VG+ R ED LR++R RF A++ N ++
Sbjct: 124 AMRHDGEVLDLFDGLEDMKKGVIRAVGNAEKRFTEDALRMMRALRFSAQLGFNIEADTQK 183
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGS 735
L + N L I+ ER+ E K+L GS
Sbjct: 184 ALVDLAPN---LAKIAVERVRVEFEKLLLGS 211
>gi|225459455|ref|XP_002285831.1| PREDICTED: nitrate reductase [NADH]-like [Vitis vinifera]
Length = 909
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D + + + I EL + S I P +
Sbjct: 309 RIIVTTQESDSYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEI 368
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGGK + RV+VT+D G TW V + ++W W
Sbjct: 369 LPINSWTTQRPYTLKGYAYSGGGKKVTRVEVTMDGGETWQVCRLDHPEKPNKYGKYWCWC 428
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D++ K+
Sbjct: 429 FW---------SLEVEVLDLIGAKE 444
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 538 YSMSEVKKHNSADST-WIVVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 593
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE YRIG +
Sbjct: 594 -SDKAKKLLEDYRIGEL 609
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK G WG A V + W G RL DVLK GI
Sbjct: 186 VCAGNRRKEQNMVKQTIGFNWGAAGVSTSVWRGVRLRDVLKRCGI 230
>gi|351726431|ref|NP_001238150.1| inducible nitrate reductase [NADH] 2 [Glycine max]
gi|730143|sp|P39870.1|NIA2_SOYBN RecName: Full=Inducible nitrate reductase [NADH] 2; Short=NR
gi|537627|gb|AAA96813.1| inducible nitrate reductase 2 [Glycine max]
Length = 890
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ +S +++ D + D + + + I EL + S I P +
Sbjct: 291 RIIVTTDQSQNYYHYKDNRVLPSHVDAELANAQAWWYKPDYIINELNINSVITTPCHEEI 350
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGG+ + RV+VT+D G TW V + ++W W
Sbjct: 351 LPINSWTTQMPYFIRGYAYSGGGRKVTRVEVTLDGGETWQVCTLDCPEKPNKYGKYWCWC 410
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
LW EV ++D+L ++ D A N P+++
Sbjct: 411 LWSV---------EVEVLDLLGAREIAVRAWDEALNTQPEKL 443
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
Y++S+++ H + S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 520 YTMSEVRRHNNADSA-WIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFEAIH--- 575
Query: 81 LQDEVFELLESYRIGNIS 98
D+ ++LE YRIG ++
Sbjct: 576 -SDKAKQMLEDYRIGELT 592
>gi|445059634|ref|YP_007385038.1| tRNA CCA-pyrophosphorylase [Staphylococcus warneri SG1]
gi|443425691|gb|AGC90594.1| tRNA CCA-pyrophosphorylase [Staphylococcus warneri SG1]
Length = 400
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 620 REKEDRIGENQP-----FRKLTLSVQDKDRSFR-----LDGTVYDYFNGHEDLKKGVCAF 669
R +E+ I +P R L VQ +D + D +DYF+G +D+ G+
Sbjct: 85 RAEEEYIDHRRPSDVHFVRDLYEDVQRRDFTINAIAMDTDYQTFDYFSGEDDINNGIIRT 144
Query: 670 VGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELN 729
VG P R +ED LRILR RF +++ H +A+ N ++ + +S ERI EL
Sbjct: 145 VGQPTERFEEDALRILRGLRFQSQLNFKIEYH---TYNAMANQMEDIKYLSIERIIVELK 201
Query: 730 KILGGS 735
K++ G
Sbjct: 202 KLISGQ 207
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVK 434
S+ D LM + HDID T+ATPD+++++F G++HGT+ N +EN+EV
Sbjct: 29 SVRDYLMQRPIHDIDITTSATPDEIESIFDHTI-----PVGKEHGTINVVYN-RENYEVT 82
Query: 435 PVKG 438
+
Sbjct: 83 TFRA 86
>gi|347300846|gb|AEO72337.1| nitrate reductase 1 [Vitis vinifera]
Length = 909
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D + + + I EL + S I P +
Sbjct: 309 RIIVTTQESDSYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEI 368
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGGK + RV+VT+D G TW V + ++W W
Sbjct: 369 LPINSWTTQRPYTLKGYAYSGGGKKVTRVEVTMDGGETWQVCRLDHPEKPNKYGKYWCWC 428
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D++ K+
Sbjct: 429 FW---------SLEVEVLDLIGAKE 444
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 538 YSMSEVKKHNSADST-WIVVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 593
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE YRIG +
Sbjct: 594 -SDKAKKLLEDYRIGEL 609
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE VK G WG A V + W G RL DVLK GI
Sbjct: 186 VCAGNRRKEQNMVKQTIGFNWGAAGVSTSVWRGVRLRDVLKRCGI 230
>gi|319405251|emb|CBI78856.1| poly(A) polymerase [Bartonella sp. AR 15-3]
Length = 417
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI-CNNPNNHKEEVLSA 708
G VYD G D+ F+G RI EDYLRILR+FRFFA P+ + +
Sbjct: 136 GEVYDEVGGLNDIATRTVRFIGVAEQRICEDYLRILRFFRFFAWYGIGRPDAEGLKACTR 195
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
+K+ GL +S ER+W E+ K+L
Sbjct: 196 LKH---GLQKLSPERVWGEMKKLL 216
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMF 935
+TTLR D+ TDGRHA+V F+ DWK DA RRD T+N+++
Sbjct: 94 VTTLRSDIETDGRHAKVIFSRDWKKDAERRDFTINALY 131
>gi|53759053|gb|AAU93317.1| nitrate reductase [Colletotrichum sublineola]
Length = 235
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 72/171 (42%), Gaps = 32/171 (18%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSP--------AIQELPVISAICLPVA 300
K I+ E +W Y P+TD V A P AI +L SA C P
Sbjct: 65 KRIIGTKEPNDNWYHIYYNRVLPTTDSPDVS-ADLPEVWKDQRYAIYDLNPNSATCYPAH 123
Query: 301 DAKLKLEN--HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN---------------- 342
D + L + +V+GYA+SGGG+ I RV+VT+D+G+TW +AN
Sbjct: 124 DEVISLADGAKSYKVRGYAYSGGGRRITRVEVTLDRGKTWLLANIDYPEDTYRLAPEGET 183
Query: 343 -FTGQDSQAPLTRHWGWTLWRATIPV----DPKTKEVSIMDMLMGKKPHDI 388
+ G+ + W W IP+ D V MD M +P D+
Sbjct: 184 LYGGRVDMDWRETSFCWCFWDLDIPITRLADAADVMVRAMDESMMVQPRDM 234
>gi|406996766|gb|EKE15031.1| hypothetical protein ACD_12C00188G0002 [uncultured bacterium]
Length = 457
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 648 LDGTVY-DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVL 706
DG++ D +NG EDL+K + VGDP R +ED LR+LR RF +++ +E+
Sbjct: 134 FDGSIIIDPYNGQEDLEKKLIKAVGDPDIRFKEDALRLLRAIRFTSQLGFLI---EEKTN 190
Query: 707 SAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLF 752
+IK N + + +SGERI E KIL G E +L + LL +
Sbjct: 191 DSIKKNANLISKVSGERIRDEFLKILSGDHPSEGVLFLKSTGLLSY 236
>gi|299538590|ref|ZP_07051873.1| CCA-adding enzyme [Lysinibacillus fusiformis ZC1]
gi|298726177|gb|EFI66769.1| CCA-adding enzyme [Lysinibacillus fusiformis ZC1]
Length = 390
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 88/191 (46%), Gaps = 24/191 (12%)
Query: 552 LLTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTA 611
LL RP + V + P+ E + F ++ I +HG L I G V
Sbjct: 35 LLDRPAHDVDVATNALPE--------EVKTVF----QKTVDIGIQHGTVLVIVPAGPV-- 80
Query: 612 KVLSYRNRREKED-RIGENQPF-RKLTLSVQDKDRSF-----RLDGTVYDYFNGHEDLKK 664
+V +YR E D R +N F R L +Q +D + R DG+ DY+ G +D++K
Sbjct: 81 EVTTYRTDGEYTDHRRPQNVHFVRSLKEDLQRRDFTMNAIAMRRDGSFVDYYGGQQDIEK 140
Query: 665 GVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERI 724
V VG+ R ED LR+LR RF A++ + L+AI+ L I+ ERI
Sbjct: 141 RVIRAVGEAEKRFAEDALRMLRAIRFSAQLDFTIEAN---TLAAIQQRAGDLSFIAKERI 197
Query: 725 WTELNKILGGS 735
EL+K+ G
Sbjct: 198 KAELDKLWVGQ 208
>gi|184155361|ref|YP_001843701.1| tRNA CCA-pyrophosphorylase [Lactobacillus fermentum IFO 3956]
gi|226702069|sp|B2GC39.1|CCA_LACF3 RecName: Full=CCA-adding enzyme; AltName: Full=CCA tRNA
nucleotidyltransferase; AltName: Full=tRNA
CCA-pyrophosphorylase; AltName: Full=tRNA
adenylyl-/cytidylyl- transferase; AltName: Full=tRNA
nucleotidyltransferase; AltName: Full=tRNA-NT
gi|183226705|dbj|BAG27221.1| putative poly(A) polymerase [Lactobacillus fermentum IFO 3956]
Length = 400
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
+ + DGTV D F+G DLK+ + VGDP R ED LR++R RF A++ +
Sbjct: 124 ALKEDGTVVDLFDGLGDLKRHLIKAVGDPAERFHEDALRMMRAARFAAKLGFQI---EPG 180
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL 751
L+ + N L I+ ERI E K+L G + + ML L L
Sbjct: 181 TLAGMSQNAALLEKIAVERIQVEFEKLLLGKAVQNGLAAMLDTKLYL 227
>gi|225868453|ref|YP_002744401.1| CCA-adding enzyme [Streptococcus equi subsp. zooepidemicus]
gi|225701729|emb|CAW99090.1| CCA-adding enzyme [Streptococcus equi subsp. zooepidemicus]
Length = 404
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D FNG EDLK + VG P R +ED LRI+R FRF A + + E A
Sbjct: 129 DGQVIDIFNGLEDLKHKLLRAVGRPQERFEEDALRIMRGFRFAASLDFDIET---ETFEA 185
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
+K++ L IS ER + EL+K+L ++ +L M+
Sbjct: 186 MKSHAPLLEKISVERSFIELDKLLMAPKWRKGILAMI 222
>gi|415768871|ref|ZP_11484025.1| polyA polymerase [Aggregatibacter actinomycetemcomitans D17P-2]
gi|348657717|gb|EGY75303.1| polyA polymerase [Aggregatibacter actinomycetemcomitans D17P-2]
Length = 648
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI---CNNPNNHKEEV 705
D T+ DYFNG +DLK G +GDPV+R QED +R+LR RF A++ + P+ +
Sbjct: 195 DNTLKDYFNGIDDLKNGKLRLIGDPVTRYQEDPVRMLRSIRFMAKLEMFLDKPSEAPIKE 254
Query: 706 LSAIKNNLDGLHNISGERIWTELNKIL-GGSFSKEMMLKMLY 746
LS + L NI R++ E K+L GGS K L Y
Sbjct: 255 LSHL------LKNIPPARLFEESLKLLQGGSGVKTYRLLRQY 290
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEE 406
+ D+L+GKKP D D ATNA P+Q++A+F +
Sbjct: 89 CLRDLLLGKKPKDFDVATNARPEQIQAVFQRQ 120
>gi|414564120|ref|YP_006043081.1| CCA-adding enzyme [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847185|gb|AEJ25397.1| CCA-adding enzyme [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 400
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D FNG EDLK + VG P R +ED LRI+R FRF A + + E A
Sbjct: 125 DGQVIDIFNGLEDLKHKLLRAVGRPQERFEEDALRIMRGFRFAASLDFDIET---ETFEA 181
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
+K++ L IS ER + EL+K+L ++ +L M+
Sbjct: 182 MKSHAPLLEKISVERSFIELDKLLMAPKWRKGILAMI 218
>gi|302141875|emb|CBI19078.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D + + + I EL + S I P +
Sbjct: 221 RIIVTTQESDSYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEI 280
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + + ++GYA+SGGGK + RV+VT+D G TW V + ++W W
Sbjct: 281 LPINSWTTQRPYTLKGYAYSGGGKKVTRVEVTMDGGETWQVCRLDHPEKPNKYGKYWCWC 340
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D++ K+
Sbjct: 341 FW---------SLEVEVLDLIGAKE 356
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 450 YSMSEVKKHNSADST-WIVVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIH--- 505
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE YRIG +
Sbjct: 506 -SDKAKKLLEDYRIGEL 521
>gi|373107072|ref|ZP_09521372.1| hypothetical protein HMPREF9623_01036 [Stomatobaculum longum]
gi|371652011|gb|EHO17437.1| hypothetical protein HMPREF9623_01036 [Stomatobaculum longum]
Length = 415
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D F G EDL +G VGDP +R +ED LR+LR RF A++ + L+ +
Sbjct: 123 GELVDLFGGQEDLARGCIRCVGDPYARFREDALRMLRAVRFAAQLNFEIEAETFKALTEL 182
Query: 710 KNNLDGLHNISGERIWTELNKIL 732
+N L +S ERI EL K+L
Sbjct: 183 SSN---LARVSKERILAELTKLL 202
>gi|284447580|gb|ADB88863.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 136
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 20/125 (16%)
Query: 286 IQELPVISAIC-------LPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTW 338
I EL + SAI +P+ + K K+ ++GY ++GGG+ ++RV+V+ID G+TW
Sbjct: 11 INELNINSAIAYPGHQELVPLVNPKTKMPTKTYPIRGYCYTGGGRKVIRVEVSIDGGKTW 70
Query: 339 HVANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDI----DFATNA 394
++ T + R+W W+ + EV++ D+ +KP + D A N
Sbjct: 71 TLSKLTHPEKPTEYGRYWCWSFFE---------HEVALSDIWALEKPELLCRGWDAAMNR 121
Query: 395 TPDQM 399
P+++
Sbjct: 122 QPEKL 126
>gi|218191652|gb|EEC74079.1| hypothetical protein OsI_09099 [Oryza sativa Indica Group]
Length = 893
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D + + + I EL + S I P D
Sbjct: 287 RIIVASSESESYYHYRDNRVLPSHVDAELANAEAWWYKPEYMINELNINSVITTPGHDEV 346
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GYA+SGGG+ + RV+VT+D G TW V N + ++W W
Sbjct: 347 LPINALTTQRPYTMKGYAYSGGGRKVTRVEVTLDGGETWQVCNLDHPERPTKYGKYWCWC 406
Query: 360 LWRATIPV 367
W + V
Sbjct: 407 FWSVDVEV 414
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
Y++S+++ H +S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 516 YTMSEVRRHTTPESA-WIIVHGHVYDCTGFLKDHPGGADSIMINAGTDCTEEFDAIH--- 571
Query: 81 LQDEVFELLESYRIGNISQEDSKLAAKDIASD 112
D+ LLE YRIG + S + + ++D
Sbjct: 572 -SDKARGLLEMYRIGELIVTGSDYSPQSSSAD 602
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE V+ G WG A+ + W G RL DVL+ G+
Sbjct: 164 VCAGNRRKEQNMVRQTVGFNWGPGAISTSVWRGVRLRDVLRWCGV 208
>gi|170760612|ref|YP_001787688.1| poly(A) polymerase [Clostridium botulinum A3 str. Loch Maree]
gi|169407601|gb|ACA56012.1| polyA polymerase family protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 450
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 106/241 (43%), Gaps = 51/241 (21%)
Query: 516 VRVEIWSKAVDSSYNTQPENGHPSGYQPRATLQGARLLTRPPNPHSVRFKSGPDGKMKLD 575
+++EI K V+ NT ENG+ + Y ++ + LL R N + + P
Sbjct: 6 IKIEI-PKGVEYIINTLQENGYEA-YIVGGAVRDS-LLERKVNDWDITTSANP------- 55
Query: 576 SPEFHSCFTPELKRLAGIFEKHGYQLRIAG--EGTVTA-------KVLSYR-------NR 619
+ + IFE GY++ G GTVT +V ++R NR
Sbjct: 56 ------------QEVMNIFENLGYKIIPTGLKHGTVTILINSIGYEVTTFRIDGEYEDNR 103
Query: 620 REKEDR----IGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVS 675
R KE + + E+ R LT++ + RL DYF+G EDL + VGD
Sbjct: 104 RPKEVKFTSNLKEDLKRRDLTINAMAYNDKTRL----VDYFHGLEDLNNKIIRCVGDSKD 159
Query: 676 RIQEDYLRILRYFRFFARICNNPNNHKEEVLSA-IKNNLDGLHNISGERIWTELNKILGG 734
R ED LR+LR RF +++ N H EE I+ + N+S ERI EL KIL
Sbjct: 160 RFNEDSLRMLRCIRFASQL----NFHMEESTKLNIRELSRNIANVSMERIRDELCKILVS 215
Query: 735 S 735
S
Sbjct: 216 S 216
>gi|424736644|ref|ZP_18165103.1| CCA-adding enzyme [Lysinibacillus fusiformis ZB2]
gi|422949640|gb|EKU44014.1| CCA-adding enzyme [Lysinibacillus fusiformis ZB2]
Length = 390
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 88/191 (46%), Gaps = 24/191 (12%)
Query: 552 LLTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTA 611
LL RP + V + P+ E + F ++ I +HG L I G V
Sbjct: 35 LLDRPAHDVDVATNALPE--------EVKTVF----QKTVDIGIQHGTVLVIVPAGPV-- 80
Query: 612 KVLSYRNRREKED-RIGENQPF-RKLTLSVQDKDRSF-----RLDGTVYDYFNGHEDLKK 664
+V +YR E D R +N F R L +Q +D + R DG+ DY+ G +D++K
Sbjct: 81 EVTTYRTDGEYTDHRRPQNVHFVRSLKEDLQRRDFTMNAIAMRRDGSFVDYYGGQQDIEK 140
Query: 665 GVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERI 724
V VG+ R ED LR+LR RF A++ + L+AI+ L I+ ERI
Sbjct: 141 RVIRAVGEAEKRFAEDALRMLRAIRFSAQLDFTIEAN---TLAAIQQRAADLSFIAKERI 197
Query: 725 WTELNKILGGS 735
EL+K+ G
Sbjct: 198 KAELDKLWVGQ 208
>gi|255070861|ref|XP_002507512.1| nitrate reductase apoenzyme [Micromonas sp. RCC299]
gi|226522787|gb|ACO68770.1| nitrate reductase apoenzyme [Micromonas sp. RCC299]
Length = 972
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 286 IQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTG 345
EL + S I P +++ + ++GYA+SGGG++I+RV+V++D G+TW +A
Sbjct: 336 FNELNINSVISCPAHGDTIEISDRNFTMKGYAYSGGGRSIIRVEVSLDNGQTWRLARHYH 395
Query: 346 QDSQAPLTRHWGWTLWRATIP 366
+ W W W IP
Sbjct: 396 PCPTTKYGKQWCWAYWTHDIP 416
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQ--MHPGG--EIIMKAAGGSIEPFWAMYG 78
Y + +I+ H D + W++ + VYD+ ++ HPGG I M A + E F A++
Sbjct: 553 YRMQEIEEH-DSEEDAWILIKDRVYDVNRYISEGHHPGGNASITMNAGTDATEDFEAVHS 611
Query: 79 VHLQDEVFELLESYRIGNISQEDSKLA 105
+ ++ LE++ IG + D+ A
Sbjct: 612 A----KAWKQLEAFAIGYLDPRDNPAA 634
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGIS 466
V A KE ++ G WG A+ N WTG L DVL+ AG++
Sbjct: 170 VSAANRGKEQNMLEQTNGFNWGAGAISNTIWTGVPLRDVLRIAGVT 215
>gi|367475166|ref|ZP_09474639.1| putative poly(A) polymerase [Bradyrhizobium sp. ORS 285]
gi|365272533|emb|CCD87107.1| putative poly(A) polymerase [Bradyrhizobium sp. ORS 285]
Length = 417
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V+D+ G D+ + F+GDP RI EDYLRILR+FR A + + ++ L+
Sbjct: 134 DGVVHDHVGGLADIAQRRVRFIGDPAQRIAEDYLRILRFFRIHAAFGHG-DPDRDGYLAC 192
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
I GL +S ER+ E+ K++
Sbjct: 193 IVGR-SGLATLSAERVRMEMLKLV 215
Score = 47.8 bits (112), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLR D T GR A+V+F DW DA+RRD T+N++ +G
Sbjct: 93 VTTLREDTETFGRKAKVEFGRDWVGDAHRRDFTINALSVG 132
>gi|417007628|ref|ZP_11945403.1| tRNA CCA-pyrophosphorylase [Lactobacillus helveticus MTCC 5463]
gi|328467369|gb|EGF38447.1| tRNA CCA-pyrophosphorylase [Lactobacillus helveticus MTCC 5463]
Length = 399
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
L G + D FNG EDLK + VGDP R ED LR++R RF +++ N E+
Sbjct: 128 LYGQIVDLFNGVEDLKNHIIRAVGDPEKRFHEDALRMMRAVRFTSQLKFNLEEKTEQ--- 184
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKE 739
AIK+N + L IS ERI E K+ G S++
Sbjct: 185 AIKDNHELLKKISVERIREEFVKMGIGPHSRQ 216
>gi|227515169|ref|ZP_03945218.1| tRNA adenylyltransferase [Lactobacillus fermentum ATCC 14931]
gi|260662126|ref|ZP_05863022.1| polynucleotide adenylyltransferase region [Lactobacillus fermentum
28-3-CHN]
gi|227086501|gb|EEI21813.1| tRNA adenylyltransferase [Lactobacillus fermentum ATCC 14931]
gi|260553509|gb|EEX26401.1| polynucleotide adenylyltransferase region [Lactobacillus fermentum
28-3-CHN]
Length = 400
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
+ + DGTV D F+G DLK+ + VGDP R ED LR++R RF A++ +
Sbjct: 124 ALKEDGTVVDLFDGLGDLKRHLIKAVGDPAERFHEDALRMMRAARFAAKLGFQI---EPG 180
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL 751
L+ + N L I+ ERI E K+L G + + ML L L
Sbjct: 181 TLAGMSQNAALLEKIAVERIQVEFEKLLLGKAVQNGLATMLDTKLYL 227
>gi|325072747|gb|ADY76390.1| nitrate reductase, partial [uncultured Trichocladium]
gi|325072797|gb|ADY76415.1| nitrate reductase, partial [uncultured Trichocladium]
Length = 280
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 23/131 (17%)
Query: 285 AIQELPVISAICLPVADAKLKLE--NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
AI +L SAIC P D K+ L + +++GYA+SGGGK + R++VT+DQG++W +AN
Sbjct: 149 AIYDLNTNSAICYPAHDEKVPLTGGDESYKLKGYAYSGGGKRVTRLEVTLDQGKSWILAN 208
Query: 343 FTGQDSQ---AP---------LTRHW-----GWTLWRATIPV----DPKTKEVSIMDMLM 381
+ + Q AP L W W W IP+ D + MD M
Sbjct: 209 VSYPEDQYRTAPDGESLYGGRLDVSWRETCFCWCFWELDIPISQLQDAGDVMIRAMDDSM 268
Query: 382 GKKPHDIDFAT 392
+P D+ ++
Sbjct: 269 MVQPRDMYWSV 279
>gi|385812297|ref|YP_005848688.1| polynucleotide adenylyltransferase region [Lactobacillus fermentum
CECT 5716]
gi|299783194|gb|ADJ41192.1| Polynucleotide adenylyltransferase region [Lactobacillus fermentum
CECT 5716]
Length = 400
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
+ + DGTV D F+G DLK+ + VGDP R ED LR++R RF A++ +
Sbjct: 124 ALKEDGTVVDLFDGLGDLKRHLIKAVGDPAERFHEDALRMMRAARFAAKLGFQI---EPG 180
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLL 751
L+ + N L I+ ERI E K+L G + + ML L L
Sbjct: 181 TLAGMSQNAALLEKIAVERIQVEFEKLLLGKAVQNGLATMLDTKLYL 227
>gi|128198|sp|P23312.1|NIA_SPIOL RecName: Full=Nitrate reductase [NADH]; Short=NR
gi|170119|gb|AAA34033.1| NADH nitrate reductase [Spinacia oleracea]
Length = 926
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 23/191 (12%)
Query: 207 YVMEPVRSPLL----KATSLKPYNAEPPPSMLYSSLLRIPFCSHTGKVILSDHESTSHWQ 262
+ M+P R +L L P + P M+ + ++I++ ES +++
Sbjct: 281 FAMDPARDIILAYMQNGEKLSPDHGYPV-RMIIPGFIGGRMVKWLKRIIVTTTESDNYYH 339
Query: 263 QNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAKLKLENHQME----V 313
D + D + + + + I EL V S I P + L + + +
Sbjct: 340 YKDNRVLPSHVDAELANSEAWWYKQEYIINELNVNSVITSPCHEEILPINAWTTQRPYTM 399
Query: 314 QGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKE 373
+GYA+SGGG+ + RV+VT+D G TW + Q+ + + W W W + E
Sbjct: 400 RGYAYSGGGRKVTRVEVTMDGGDTWDICELDHQERGSKYGKFWCWCFW---------SLE 450
Query: 374 VSIMDMLMGKK 384
V ++D+L K+
Sbjct: 451 VEVLDLLGAKE 461
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H + S W+V VY+ T F++ HPGG I++ A E F A++
Sbjct: 554 YSMSEVKKH-NTADSAWIVVHGNVYNATRFLKDHPGGSDSILINAGTDCTEEFDAIH--- 609
Query: 81 LQDEVFELLESYRIGNI 97
D+ LLE +RIG +
Sbjct: 610 -SDKAKRLLEDFRIGEL 625
Score = 40.0 bits (92), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 22/45 (48%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE K G WG AAV + W G L DVLK G+
Sbjct: 203 VCAGNRRKEQNMTKQSIGFNWGSAAVSTSVWRGVPLRDVLKRCGV 247
>gi|326515144|dbj|BAK03485.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ +ES S++ D + D + + + I EL + S I P D
Sbjct: 78 RIVVACNESESYYHYRDNRVLPSHVDAELANAEAWWYKPECMINELNINSVITTPGHDEV 137
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGG+ + RV+VT+D G TW V + + ++W W
Sbjct: 138 LPINALTTQKPYTMKGYAYSGGGRKVTRVEVTLDGGETWQVCDLEHPERPTKYGKYWCWC 197
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++++L K+ D A N P+++
Sbjct: 198 FW---------SVEVEVLELLGAKEMAVRAWDEALNTQPERL 230
Score = 47.0 bits (110), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++S+++ H K S W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 307 FTMSEVRRHAS-KDSAWIVVHGHVYDCTGFLKDHPGGADSILINAGSDCTEEFDAIHSAK 365
Query: 81 LQDEVFELLESYRIGNI-------SQEDSKLAAKDIASDPYVMEP 118
+ LLE YR+G + S + S I P V+ P
Sbjct: 366 ARG----LLEMYRVGELIVTGNDYSPQSSSADLAAIVEAPAVVVP 406
>gi|317471034|ref|ZP_07930409.1| poly A polymerase head domain-containing protein [Anaerostipes sp.
3_2_56FAA]
gi|316901475|gb|EFV23414.1| poly A polymerase head domain-containing protein [Anaerostipes sp.
3_2_56FAA]
Length = 449
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG + DY+ G EDLKK VGD R ED LRILR RF A++ +EE A
Sbjct: 126 DGLI-DYYGGAEDLKKKTIRCVGDARRRFDEDALRILRALRFQAQLGFVI---EEETKQA 181
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
I+ L +IS ERI TEL K+L
Sbjct: 182 IQKQAKFLKDISAERIQTELTKLL 205
>gi|294784658|ref|ZP_06749947.1| poly(A) polymerase [Fusobacterium sp. 3_1_27]
gi|294487874|gb|EFG35233.1| poly(A) polymerase [Fusobacterium sp. 3_1_27]
Length = 451
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 644 RSFRLDGTVY-------DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICN 696
R F ++ Y D +NG +D++ + FVG RI ED LR+LR FRF +R+
Sbjct: 122 RDFTINAMAYNQKEGIIDLYNGQKDIENRIINFVGKAEERIIEDPLRVLRAFRFMSRLKF 181
Query: 697 NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL--LLFSK 754
+ + E + AIK + L NIS ERI E +K+L G K + M + L+ S+
Sbjct: 182 SLS---ENTVEAIKKQKELLKNISEERITMEFSKLLLGENIKNTLTLMKDTGVLELIISE 238
Query: 755 LKAT 758
KAT
Sbjct: 239 FKAT 242
>gi|284447594|gb|ADB88870.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 136
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 20/125 (16%)
Query: 286 IQELPVISAIC-------LPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTW 338
I EL + SAI +P+ + K K+ ++GY ++GGG+ ++RV+V+ID G+TW
Sbjct: 11 INELNINSAIAYPGHQELVPLVNPKTKMPTKTYPIRGYCYTGGGRKVIRVEVSIDGGKTW 70
Query: 339 HVANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDI----DFATNA 394
++ T + R+W W+ + EV++ D+ +KP + D A N
Sbjct: 71 TLSKLTHPEKPTEYGRYWCWSFFE---------HEVALSDIWALEKPELLCRGWDAAMNR 121
Query: 395 TPDQM 399
P+++
Sbjct: 122 QPEKL 126
>gi|284447402|gb|ADB88775.1| assimilatory nitrate reductase [Isochrysis galbana]
Length = 136
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 20/125 (16%)
Query: 286 IQELPVISAIC-------LPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTW 338
I EL + SAI +P+ + K K+ ++GY ++GGG+ ++RV+V+ID G+TW
Sbjct: 11 INELNINSAIAYPGHQELVPLVNPKTKMPTKTYPIRGYCYTGGGRKVIRVEVSIDGGKTW 70
Query: 339 HVANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDI----DFATNA 394
++ T + R+W W+ + EV++ D+ +KP + D A N
Sbjct: 71 TLSKLTHPEKPTEYGRYWCWSFFE---------HEVALSDIWALEKPELLCRGWDAAMNR 121
Query: 395 TPDQM 399
P+++
Sbjct: 122 QPEKL 126
>gi|260101624|ref|ZP_05751861.1| poly A polymerase [Lactobacillus helveticus DSM 20075]
gi|260084557|gb|EEW68677.1| poly A polymerase [Lactobacillus helveticus DSM 20075]
Length = 399
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 648 LDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
L G + D FNG EDLK + VGDP R ED LR++R RF +++ N E+
Sbjct: 128 LYGQIVDLFNGVEDLKNHIIRAVGDPEKRFHEDALRMMRAVRFTSQLKFNLEEKTEQ--- 184
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKE 739
AIK+N + L IS ERI E K+ G S++
Sbjct: 185 AIKDNHELLKKISVERIREEFVKMGIGPHSRQ 216
>gi|115476820|ref|NP_001062006.1| Os08g0468100 [Oryza sativa Japonica Group]
gi|116256153|sp|P16081.3|NIA1_ORYSJ RecName: Full=Nitrate reductase [NADH] 1; Short=NR1
gi|42407400|dbj|BAD09558.1| nitrate reductase apoenzyme [Oryza sativa Japonica Group]
gi|113623975|dbj|BAF23920.1| Os08g0468100 [Oryza sativa Japonica Group]
gi|125603710|gb|EAZ43035.1| hypothetical protein OsJ_27622 [Oryza sativa Japonica Group]
Length = 916
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES +++ D + D + + + I EL V S I P D
Sbjct: 314 RIIVTTAESDNYYHYKDNRVLPSHVDAELANADAWWYKPEYIINELNVNSVITTPGHDEI 373
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK I RV+VT+D G TW V + +HW W
Sbjct: 374 LPINGITTQRGYTMKGYAYSGGGKRITRVEVTLDGGETWLVCVLDLPEKPTKYGKHWCWC 433
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + EV ++D+L K+
Sbjct: 434 FW---------SVEVEVLDLLGAKE 449
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++S+++ H + S W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 544 FTMSEVRKHSS-QDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAIH--- 599
Query: 81 LQDEVFELLESYRIGNI-------SQEDSKLAAKDIASDPYVMEPVRSPLLKATS 128
D+ LL++YRIG + S ++S A +++ + E +++P A S
Sbjct: 600 -SDKAKALLDTYRIGELITTGAGYSSDNSVHGASNLSQLAPIREAIKAPAPVALS 653
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS 470
VCA KE V+ G WG A V + W GARL DVL+ GI P +
Sbjct: 191 VCAGNRRKEQNMVQQTVGFNWGAAGVSTSVWRGARLRDVLRRCGIMPSKG 240
>gi|84514898|ref|ZP_01002261.1| polyA polymerase family protein [Loktanella vestfoldensis SKA53]
gi|84511057|gb|EAQ07511.1| polyA polymerase family protein [Loktanella vestfoldensis SKA53]
Length = 380
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D G DL F+ D RI+EDYLRILR+FRF A + + L+A
Sbjct: 131 DGMVVDPLGGLPDLFARRVRFIEDAEQRIREDYLRILRFFRFHA--WYGADGIDPDALAA 188
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
N DGL ++S ER+ E+ K+L
Sbjct: 189 CAANTDGLASLSRERVTAEMLKLL 212
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TT R DV TDGR A V F + DA RRD T+N+++ G
Sbjct: 90 VTTFRRDVATDGRRAVVAFADTMLEDARRRDFTMNALYAG 129
>gi|115448947|ref|NP_001048253.1| Os02g0770800 [Oryza sativa Japonica Group]
gi|46805324|dbj|BAD16843.1| putative nitrate reductase [NAD(P)H] [Oryza sativa Japonica Group]
gi|113537784|dbj|BAF10167.1| Os02g0770800 [Oryza sativa Japonica Group]
gi|215717065|dbj|BAG95428.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 889
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D + + + I EL + S I P D
Sbjct: 287 RIIVASSESESYYHYRDNRVLPSHVDAELANAEAWWYKPEYMINELNINSVITTPGHDEV 346
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GYA+SGGG+ + RV+VT+D G TW V N + ++W W
Sbjct: 347 LPINALTTQRPYTMKGYAYSGGGRKVTRVEVTLDGGETWQVCNLDHPERPTKYGKYWCWC 406
Query: 360 LWRATIPV 367
W + V
Sbjct: 407 FWSVDVEV 414
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
Y++S+++ H +S+ W++ VYD T F++ HPGG I++ A E F A++
Sbjct: 516 YTMSEVRRHTTPESA-WIIVHGHVYDCTGFLKDHPGGADSIMINAGTDCTEEFDAIH--- 571
Query: 81 LQDEVFELLESYRIGNISQEDSKLAAKDIASD 112
D+ LLE YRIG + S + + ++D
Sbjct: 572 -SDKARGLLEMYRIGELIVTGSDYSPQSSSAD 602
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE V+ G WG A+ + W G RL DVL+ G+
Sbjct: 164 VCAGNRRKEQNMVRQTVGFNWGPGAISTSVWRGVRLRDVLRWCGV 208
>gi|328957360|ref|YP_004374746.1| tRNA CCA-pyrophosphorylase [Carnobacterium sp. 17-4]
gi|328673684|gb|AEB29730.1| tRNA CCA-pyrophosphorylase [Carnobacterium sp. 17-4]
Length = 401
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG + DYFNG +DL+ + VG P R ED LR++R RF +++ N ++ E +A
Sbjct: 126 DGEIIDYFNGQKDLENKLIKAVGIPEERFFEDALRMMRGVRFVSQLNFNMDSETE---AA 182
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFS 753
I+ N L I+ ERI E K+L GS K+ + + NL +
Sbjct: 183 IQKNHPLLKKIAIERIQVEFVKLLLGSGRKQGLGLFIRTNLFYYC 227
>gi|148253774|ref|YP_001238359.1| poly(A) polymerase [Bradyrhizobium sp. BTAi1]
gi|146405947|gb|ABQ34453.1| putative poly(A) polymerase [Bradyrhizobium sp. BTAi1]
Length = 417
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V+D+ G D+ F+GDP RI EDYLRILR+FR + + + ++ L+
Sbjct: 134 DGVVHDHVGGLADIAARRVRFIGDPAQRIAEDYLRILRFFRIHSAFGHGVPD-RDGYLAC 192
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
I GL +S ER+ E+ K+L
Sbjct: 193 IAGRA-GLATLSAERVRMEMLKLL 215
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFLG 937
+TTLR D T GR A+V+F DW DA+RRD T+N++ +G
Sbjct: 93 VTTLREDTETFGRKAKVEFGRDWIGDAHRRDFTINALSVG 132
>gi|416069817|ref|ZP_11583413.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype f
str. D18P1]
gi|347999570|gb|EGY40391.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype f
str. D18P1]
Length = 432
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI---CNNPNNHKEEV 705
D T+ DYFNG +DLK G +GDPV+R QED +R+LR RF A++ + P+ +
Sbjct: 139 DNTLKDYFNGIDDLKNGKLRLIGDPVTRYQEDPVRMLRSIRFMAKLEMFLDKPSEAPIKE 198
Query: 706 LSAIKNNLDGLHNISGERIWTELNKIL-GGSFSKEMMLKMLY 746
LS + L NI R++ E K+L GGS K L Y
Sbjct: 199 LSHL------LKNIPSARLFEESLKLLQGGSGVKTYRLLRQY 234
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEE 406
+ D+L+GKKP D D ATNA P+Q++A+F +
Sbjct: 33 CLRDLLLGKKPKDFDVATNARPEQIQAIFQRQ 64
>gi|386758823|ref|YP_006232039.1| tRNA CCA-pyrophosphorylase [Bacillus sp. JS]
gi|384932105|gb|AFI28783.1| tRNA CCA-pyrophosphorylase [Bacillus sp. JS]
Length = 397
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V DYF G +D+ + V VG P R QED LR+LR RF +++ + E+ +S
Sbjct: 123 DGKVLDYFGGRKDIDQKVIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEKAIS- 181
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL 749
I+ +L L ++S ER E K+L G S++ + ++ L
Sbjct: 182 IEKSL--LSHVSVERKTIEFEKLLQGRASRQALQTLIQTRL 220
>gi|387120137|ref|YP_006286020.1| polyA polymerase [Aggregatibacter actinomycetemcomitans D7S-1]
gi|416045226|ref|ZP_11575294.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype d
str. I63B]
gi|429732809|ref|ZP_19267390.1| polynucleotide adenylyltransferase [Aggregatibacter
actinomycetemcomitans Y4]
gi|347995615|gb|EGY36780.1| polyA polymerase [Aggregatibacter actinomycetemcomitans serotype d
str. I63B]
gi|385874629|gb|AFI86188.1| polyA polymerase [Aggregatibacter actinomycetemcomitans D7S-1]
gi|429155351|gb|EKX98033.1| polynucleotide adenylyltransferase [Aggregatibacter
actinomycetemcomitans Y4]
Length = 488
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI---CNNPNNHKEEV 705
D T+ DYFNG +DLK G +GDPV+R QED +R+LR RF A++ + P+ +
Sbjct: 195 DNTLRDYFNGIDDLKNGKLRLIGDPVTRYQEDPVRMLRSIRFMAKLEMFLDKPSEAPIKE 254
Query: 706 LSAIKNNLDGLHNISGERIWTELNKIL-GGSFSKEMMLKMLY 746
LS + L NI R++ E K+L GGS K L Y
Sbjct: 255 LSHL------LKNIPPARLFEESLKLLQGGSGVKTYRLLRQY 290
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEE 406
+ D+L+GKKP D D ATNA P+Q++A+F +
Sbjct: 89 CLRDLLLGKKPKDFDVATNARPEQIQAIFQRQ 120
>gi|392955783|ref|ZP_10321313.1| tRNA CCA-pyrophosphorylase [Bacillus macauensis ZFHKF-1]
gi|391878025|gb|EIT86615.1| tRNA CCA-pyrophosphorylase [Bacillus macauensis ZFHKF-1]
Length = 397
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 628 ENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRY 687
E+ R T++ KDR G +YD+F G +D+ + VG P +R +ED LR++R
Sbjct: 106 EDLSRRDFTMNAMAKDRH----GKLYDFFGGKQDIADKIITTVGSPEARFEEDPLRMMRA 161
Query: 688 FRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQ 747
RF A + + L A K L +S ER+ E K+LGG + E + + +
Sbjct: 162 LRFSAVLGFTICEETQHALCAKKALLK---RVSTERLAQEFIKLLGGQSAGEALRWLFTK 218
Query: 748 NLL 750
+L+
Sbjct: 219 DLV 221
>gi|266620762|ref|ZP_06113697.1| poly A polymerase [Clostridium hathewayi DSM 13479]
gi|288867623|gb|EFC99921.1| poly A polymerase [Clostridium hathewayi DSM 13479]
Length = 410
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 607 GTVTA-------KVLSYRNRREKEDRIGENQPFRKLTLSVQD--KDRSFRLDGTVY---- 653
GTVT +V +YR E ED G + T S+ + K R F ++ Y
Sbjct: 70 GTVTVMLNRQGYEVTTYRVDGEYED--GRHPKSVDFTTSLLEDLKRRDFTINAMAYNSRE 127
Query: 654 ---DYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIK 710
D F G EDL+ V VG V+R ED LRILR RF A++ + E +S I
Sbjct: 128 GLVDAFGGIEDLENRVIRCVGSAVNRFTEDALRILRAVRFSAQLDFRIEDETYEAISIIA 187
Query: 711 NNLDGLHNISGERIWTELNKILGGSFSKEM 740
NL+ +S ERI TEL K+L S ++M
Sbjct: 188 PNLE---KVSKERIATELTKLLLSSHPEKM 214
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEV 433
+ D L+GK+P D D T+A P ++K++F+ RT + G +HGTV +N ++ +EV
Sbjct: 31 CVRDSLLGKEPEDWDITTSARPGEVKSIFS----RTID-TGIQHGTVTVMLN-RQGYEV 83
>gi|239827472|ref|YP_002950096.1| tRNA CCA-pyrophosphorylase [Geobacillus sp. WCH70]
gi|259585843|sp|C5D3B5.1|CCA_GEOSW RecName: Full=CCA-adding enzyme; AltName: Full=CCA tRNA
nucleotidyltransferase; AltName: Full=tRNA
CCA-pyrophosphorylase; AltName: Full=tRNA
adenylyl-/cytidylyl- transferase; AltName: Full=tRNA
nucleotidyltransferase; AltName: Full=tRNA-NT
gi|239807765|gb|ACS24830.1| Polynucleotide adenylyltransferase region [Geobacillus sp. WCH70]
Length = 404
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 609 VTAKVLSYRNRREKED--RIGENQPFRKLTLSVQDKDRSFRL-----DGTVYDYFNGHED 661
++ +V ++R E ED R G R L +Q +D + +G + D F G E
Sbjct: 76 ISYEVTTFRTESEYEDYRRPGAVTFVRSLYEDLQRRDFTMNAIAMDAEGKLIDPFGGQEA 135
Query: 662 LKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISG 721
+ + VGDP +R ED LR++R RF ++ + + EE AI N L +IS
Sbjct: 136 IANRIICTVGDPKARFSEDALRMMRAIRFVGQLGFSLD---EETKQAIIENAALLAHISV 192
Query: 722 ERIWTELNKILGGSFSKEMMLKMLYQNLLLF 752
ER+ E K+L G F+ + ++ L L+
Sbjct: 193 ERMTMEFEKLLEGPFASRALSLLVETGLFLY 223
>gi|284447639|gb|ADB88892.1| assimilatory nitrate reductase [uncultured eukaryote]
Length = 136
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 20/125 (16%)
Query: 286 IQELPVISAIC-------LPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTW 338
I EL + SAI +P+ + K K+ ++GY ++GGG+ ++RV+V+ID G+TW
Sbjct: 11 INELNINSAIAYPGHQELVPLVNPKTKMPTKTYPIRGYCYTGGGRKVIRVEVSIDGGKTW 70
Query: 339 HVANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDI----DFATNA 394
++ T + R+W W+ + EV++ D+ +KP + D A N
Sbjct: 71 TLSKLTHPEKPTEYGRYWCWSFFE---------HEVALSDIWALEKPELLCRGWDAAMNR 121
Query: 395 TPDQM 399
P+++
Sbjct: 122 QPEKL 126
>gi|125583832|gb|EAZ24763.1| hypothetical protein OsJ_08536 [Oryza sativa Japonica Group]
Length = 890
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D + + + I EL + S I P D
Sbjct: 287 RIIVASSESESYYHYRDNRVLPSHVDAELANAEAWWYKPEYMINELNINSVITTPGHDEV 346
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GYA+SGGG+ + RV+VT+D G TW V N + ++W W
Sbjct: 347 LPINALTTQRPYTMKGYAYSGGGRKVTRVEVTLDGGETWQVCNLDHPERPTKYGKYWCWC 406
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK 384
W + +V ++++L K+
Sbjct: 407 FW---------SVDVEVLELLAAKE 422
Score = 40.4 bits (93), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE V+ G WG A+ + W G RL DVL+ G+
Sbjct: 164 VCAGNRRKEQNMVRQTVGFNWGPGAISTSVWRGVRLRDVLRWCGV 208
>gi|730140|sp|P39868.1|NIA2_BRANA RecName: Full=Nitrate reductase [NADH], clone PBNBR1412; Short=NR
gi|540487|dbj|BAA07395.1| nitrate reductase [Brassica napus]
Length = 911
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
++I++ ES S++ D + D + + + I EL + S I P
Sbjct: 313 RIIVTPQESDSYYHYKDNRVLPSLVDAELANAEAWWYKPEYIINELNINSVITTPGHQEI 372
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGGK + RV+VT+D G TW V + Q+ + W W
Sbjct: 373 LPINAFTTQKPYTLKGYAYSGGGKKVTRVEVTLDGGDTWSVCDLDHQEKPNKYGKFWCWC 432
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKKPHDI-----DFATNATPDQM 399
W + +V ++D+L K D+ D + N PD++
Sbjct: 433 FW---------SLDVEVLDLLSAK---DVAVRAWDESFNTQPDKL 465
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H ++S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 542 YSMSEVRKHNSVESA-WIIVHGHIYDCTRFLKDHPGGSDSILINAGTDCTEEFEAIH--- 597
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE YRIG +
Sbjct: 598 -SDKAKKLLEDYRIGEL 613
>gi|15826396|pdb|1JEX|A Chain A, Solution Structure Of A67v Mutant Of Rat Ferro Cytochrome
B5
Length = 94
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Query: 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMK--AAGGSIEPFWAMY 77
+ +Y+L +IQ HKD KS+ WV+ VYD+T+F++ HPGGE +++ A G + E F
Sbjct: 4 VKYYTLEEIQKHKDSKST-WVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFE--- 59
Query: 78 GVHLQDEVFELLESYRIGNISQEDSKLAAK 107
V +V EL ++Y IG + +D AK
Sbjct: 60 DVGHSTDVRELSKTYIIGELHPDDRSKIAK 89
>gi|404476841|ref|YP_006708272.1| polyA polymerase family protein [Brachyspira pilosicoli B2904]
gi|404438330|gb|AFR71524.1| polyA polymerase family protein [Brachyspira pilosicoli B2904]
Length = 464
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 19/148 (12%)
Query: 596 KHGYQLRIAGEGTVTAKVLSYRN-----------RREKEDRIGENQPFRKLTLSVQDKDR 644
KHG L I + V ++ ++RN + E I E+ P R LT++ +
Sbjct: 69 KHGTVLVIIEDMHV--EITTFRNDGNYSDGRHPDKVEYASSIEEDLPRRDLTINAMAYNV 126
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
LDGT+ D F+G +D+K+ + VG+P R ED LRI+R RF ++ + ++E
Sbjct: 127 ---LDGTLIDMFDGMKDIKRKIVRSVGNPYERFSEDGLRIMRAIRFATKLNFDI---EKE 180
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKIL 732
AI ++ L +I+ ERI E N IL
Sbjct: 181 TFEAICHSTGMLASIASERIREEFNGIL 208
>gi|293335371|ref|NP_001169343.1| uncharacterized protein LOC100383210 [Zea mays]
gi|224028833|gb|ACN33492.1| unknown [Zea mays]
Length = 561
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 286 IQELPVISAICLPVADAKLKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVA 341
I EL + S I P D L + ++GYA+SGGG+ + RV+VT+D G TWHV
Sbjct: 2 INELNINSVITTPGHDEVLPINALTTQRPYTIKGYAYSGGGRKVTRVEVTLDGGETWHVC 61
Query: 342 NFTGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
+ + ++W W W + +V ++D+L K+ D A N P+++
Sbjct: 62 SLDHPERPTKYGKYWCWCFW---------SVDVEVLDVLGAKEIAVRAWDEAMNTQPEKL 112
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
Y++S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 189 YTMSEVRRHTSPDSA-WIIVHGHIYDCTGFLKDHPGGADSILINAGTDCTEEFDAIH--- 244
Query: 81 LQDEVFELLESYRIGNISQEDSKLAAKDIASD 112
D+ LLE YR+G + S + ++ +D
Sbjct: 245 -SDKARGLLEMYRVGELVVTGSDYSPQNSHAD 275
>gi|297842553|ref|XP_002889158.1| hypothetical protein ARALYDRAFT_895665 [Arabidopsis lyrata subsp.
lyrata]
gi|297334999|gb|EFH65417.1| hypothetical protein ARALYDRAFT_895665 [Arabidopsis lyrata subsp.
lyrata]
Length = 920
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPA--------IQELPVISAICLPVA 300
++I++ ES +++ D + D + A S A I EL V S I P
Sbjct: 322 RIIVTPQESDNYYHYKDNRVLPSLVD---AELANSEAWWYKPEYIINELNVNSVITTPGH 378
Query: 301 DAKLKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHW 356
+ L + + ++GYA+SGGGK + RV+VT+D G TW V Q+ + W
Sbjct: 379 EEILPINAFTTQKPYTLKGYAYSGGGKKVTRVEVTLDGGDTWSVCELDHQEKPNKYGKFW 438
Query: 357 GWTLWRATIPVDPKTKEVSIMDMLMGKKPHDI-----DFATNATPDQM 399
W W + +V ++D+L K D+ D + N PD++
Sbjct: 439 CWCFW---------SLDVEVLDLLSAK---DVAVRAWDESLNTQPDKL 474
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
YS+S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 551 YSMSEVRKHNSADSA-WIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFEAIH--- 606
Query: 81 LQDEVFELLESYRIGNI 97
D+ +LLE YRIG +
Sbjct: 607 -SDKAKKLLEDYRIGEL 622
>gi|242066672|ref|XP_002454625.1| hypothetical protein SORBIDRAFT_04g034470 [Sorghum bicolor]
gi|241934456|gb|EES07601.1| hypothetical protein SORBIDRAFT_04g034470 [Sorghum bicolor]
Length = 892
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ ES S++ D + D + + + I EL + S I P D
Sbjct: 290 RIVVASSESESYYHYRDNRVLPSHVDAELANAEAWWYKPEYMINELNINSVITTPGHDEV 349
Query: 304 LKLE----NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + ++GYA+SGGG+ + RV+VT+D G TW V + + ++W W
Sbjct: 350 LPINALTTQRPYTIKGYAYSGGGRKVTRVEVTLDGGETWQVCSLDHPERPTKYGKYWCWC 409
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + +V ++D+L K+ D A N P+++
Sbjct: 410 FW---------SVDVEVLDVLGAKEIAVRAWDEAMNTQPEKL 442
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
Y++S+++ H S+ W++ +YD T F++ HPGG I++ A E F A++
Sbjct: 519 YTMSEVRRHTSPDSA-WIIVHGHIYDCTGFLKDHPGGADSILINAGTDCTEEFDAIH--- 574
Query: 81 LQDEVFELLESYRIGNISQEDSKLAAKDIASD 112
D+ LL+ YR+G + S + ++ +D
Sbjct: 575 -SDKARGLLDLYRVGELVVTGSDYSPQNSHAD 605
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE V+ G WG A+ + W GARL DVL+ G+
Sbjct: 167 VCAGNRRKEQNMVRQTVGFNWGPGAISTSVWRGARLRDVLRRCGV 211
>gi|321311714|ref|YP_004204001.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis BSn5]
gi|320017988|gb|ADV92974.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis BSn5]
Length = 397
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V DYF G +D+ + V VG P R QED LR+LR RF +++ + EE A
Sbjct: 123 DGKVLDYFGGKKDIDQKVIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEE---A 179
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL 749
I L ++S ER E K+L G S++ + ++ L
Sbjct: 180 IAKEKSLLSHVSVERKTIEFEKLLQGRASRQALQTLIQTRL 220
>gi|128191|sp|P27968.1|NIA7_HORVU RecName: Full=Nitrate reductase [NAD(P)H]
gi|19065|emb|CAA42739.1| nitrate reductase (NAD(P)H) [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ +ES S++ D + D + + + I EL + S I P D
Sbjct: 289 RIVVACNESESYYHYRDNRVLPSHVDAELANAEAWWYKPECMINELNINSVITTPGHDEV 348
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGG+ + RV+VT+D G TW V + + ++W W
Sbjct: 349 LPINALTTQKPYTMKGYAYSGGGRKVTRVEVTLDGGETWQVCDLEHPERPTKYGKYWCWC 408
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++++L K+ D A N P+++
Sbjct: 409 FW---------SVEVEVLELLGAKEMAVRAWDEALNTQPERL 441
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++S+++ H K S W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 518 FTMSEVRRHAS-KDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGSDCTEEFDAIHSAK 576
Query: 81 LQDEVFELLESYRIGNI-------SQEDSKLAAKDIASDPYVMEP 118
+ LLE YR+G + S + S I P V+ P
Sbjct: 577 ARG----LLEMYRVGELIVTGNDYSPQSSNADLAAIVEAPAVVVP 617
Score = 40.0 bits (92), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE V+ G WG A+ W G RL DVL+ G+
Sbjct: 167 VCAGNRRKEQNMVRQSSGFNWGPGAISTTVWRGVRLRDVLRRCGV 211
>gi|354500682|ref|XP_003512427.1| PREDICTED: cytochrome b5-like [Cricetulus griseus]
Length = 134
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 13 AGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMK--AAGGSI 70
AG+ + +Y+L +IQ HKD KS+ WV+ VYD+T+F++ HPGGE +++ A G +
Sbjct: 2 AGQSDKEVKYYTLEEIQKHKDSKST-WVILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 60
Query: 71 EPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAK 107
E F V + EL ++Y IG + +D AK
Sbjct: 61 ENF---EDVGHSTDARELSKTYIIGELHPDDRSKIAK 94
>gi|330919944|ref|XP_003298824.1| hypothetical protein PTT_09644 [Pyrenophora teres f. teres 0-1]
gi|311327795|gb|EFQ93070.1| hypothetical protein PTT_09644 [Pyrenophora teres f. teres 0-1]
Length = 430
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 20/120 (16%)
Query: 256 ESTSHWQQNDYKGFSPSTD--------WDTVDFAKSPAIQELPVISAICLPVADAKLKLE 307
ES S++QQ+DYK P D W VD A+ ++PV S I +P +D+ ++ E
Sbjct: 266 ESDSYYQQHDYKILPPEADCKEKAEEYWGKVD-----ALHDMPVNSVIGVPKSDSTVQQE 320
Query: 308 -NHQMEVQGYAW-SGGGKAIVRVDVTIDQGRTWH----VANFTGQDSQAPLTRHWGWTLW 361
+ +EV+GYA SG IV+V+V+ D G +W + + G+D++ + W W LW
Sbjct: 321 EDGTIEVKGYALPSGSDGPIVKVEVSTDGGNSWADAELIKTYEGEDAKD-VELKWAWALW 379
>gi|755607|gb|AAA92878.1| polyA polymerase [Bacillus subtilis subsp. subtilis str. 168]
Length = 377
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V DYF G +D+ + V VG P R QED LR+LR RF +++ + EE A
Sbjct: 103 DGKVLDYFGGKKDIDQKVIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEE---A 159
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL 749
I L ++S ER E K+L G S++ + ++ L
Sbjct: 160 IAKEKSLLSHVSVERKTIEFEKLLQGRASRQALQTLIQTRL 200
>gi|13385268|ref|NP_080073.1| cytochrome b5 [Mus musculus]
gi|3023608|sp|P56395.2|CYB5_MOUSE RecName: Full=Cytochrome b5
gi|12832403|dbj|BAB22093.1| unnamed protein product [Mus musculus]
gi|12850428|dbj|BAB28714.1| unnamed protein product [Mus musculus]
gi|19353357|gb|AAH24341.1| Cytochrome b-5 [Mus musculus]
gi|74205015|dbj|BAE20982.1| unnamed protein product [Mus musculus]
gi|148677408|gb|EDL09355.1| cytochrome b-5, isoform CRA_d [Mus musculus]
Length = 134
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 13 AGEPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMK--AAGGSI 70
AG+ + +Y+L +IQ HKD KS+ WV+ VYD+T+F++ HPGGE +++ A G +
Sbjct: 2 AGQSDKDVKYYTLEEIQKHKDSKST-WVILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 60
Query: 71 EPFWAMYGVHLQDEVFELLESYRIGNISQEDSKLAAK 107
E F V + EL ++Y IG + +D AK
Sbjct: 61 ENF---EDVGHSTDARELSKTYIIGELHPDDRSKIAK 94
>gi|375009238|ref|YP_004982871.1| CCA-adding enzyme [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288087|gb|AEV19771.1| CCA-adding enzyme [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 404
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 109/255 (42%), Gaps = 21/255 (8%)
Query: 596 KHGYQLRIAGEGTVTAKVLSYRNRREKED-RIGENQPFRKLTLSVQDKDRSFRLD----- 649
KHG + + EGT +V ++R + ED R E+ F + +L K R F ++
Sbjct: 65 KHGTVV-VVHEGTAY-EVTTFRTDGDYEDHRRPESVTFVR-SLEEDLKRRDFTMNAIAMD 121
Query: 650 --GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLS 707
GT+ D F G E +++ + VG R +ED LR++R RF +++ E+
Sbjct: 122 ERGTIIDPFGGQEAIERRLICTVGAADERFREDALRMMRAVRFVSQLG---FALAEDTKR 178
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVEL 767
AI N + +IS ER+ E+ K+L G F E + L + LF+ L +E ++
Sbjct: 179 AIVQNAPLMAHISVERMTMEMEKLLAGPFVAEAL--PLLADTGLFAYLPGLAEKEQLLRS 236
Query: 768 MKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVLSAIKKNLDGLHNI 827
L K +W L ++ IR F R PN V+ L L ++
Sbjct: 237 AAAFRWPWLTKREERWALLCRALDVKDIRPFL-RAWKLPNK----VIDEAGAILAALDDV 291
Query: 828 SGERIWTELNKILGG 842
WT L G
Sbjct: 292 PRPEAWTNEQLFLAG 306
>gi|261867904|ref|YP_003255826.1| poly(A) polymerase [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413236|gb|ACX82607.1| poly(A) polymerase (PAP) (Plasmid copy number protein)
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 592
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARI---CNNPNNHKEEV 705
D T+ DYFNG +DLK G +GDPV+R QED +R+LR RF A++ + P+ +
Sbjct: 139 DNTLKDYFNGIDDLKNGKLRLIGDPVTRYQEDPVRMLRSIRFMAKLEMFLDKPSEAPIKE 198
Query: 706 LSAIKNNLDGLHNISGERIWTELNKIL-GGSFSKEMMLKMLY 746
LS + L NI R++ E K+L GGS K L Y
Sbjct: 199 LSHL------LKNIPPARLFEESLKLLQGGSGVKTYRLLRQY 234
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEE 406
+ D+L+GKKP D D ATNA P+Q++A+F +
Sbjct: 33 CLRDLLLGKKPKDFDVATNARPEQIQAVFQRQ 64
>gi|449094740|ref|YP_007427231.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis XF-1]
gi|449028655|gb|AGE63894.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis XF-1]
Length = 397
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V DYF G +D+ + V VG P R QED LR+LR RF +++ + EE A
Sbjct: 123 DGKVLDYFGGKKDIDQKVIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEE---A 179
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL 749
I L ++S ER E K+L G S++ + ++ L
Sbjct: 180 IAKEKSLLSHVSVERKTIEFEKLLQGRASRQALQTLIQTRL 220
>gi|398311193|ref|ZP_10514667.1| tRNA CCA-pyrophosphorylase [Bacillus mojavensis RO-H-1]
Length = 397
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V DYF G +D+ + + VG P R QED LR+LR RF +++ + EE A
Sbjct: 123 DGQVLDYFGGKKDIDQQLIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSKETEE---A 179
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL 749
I L ++S ER E K+L G S+E + +++ L
Sbjct: 180 IIKEKTLLSHVSVERKTIEFEKLLLGKASREAIQMLVHTGL 220
>gi|325073089|gb|ADY76561.1| nitrate reductase, partial [uncultured Trichocladium]
Length = 274
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 23/126 (18%)
Query: 285 AIQELPVISAICLPVADAKLKLE--NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
AI +L SAIC P D K+ L + +++GYA+SGGGK + R++VT+DQG++W +AN
Sbjct: 149 AIYDLNTNSAICYPAHDEKVPLTGGDESYKLKGYAYSGGGKRVTRLEVTLDQGKSWILAN 208
Query: 343 FTGQDSQ---AP---------LTRHW-----GWTLWRATIPV----DPKTKEVSIMDMLM 381
+ + Q AP L W W W IP+ D + MD M
Sbjct: 209 VSYPEDQYRTAPDGESLYGGRLDVSWRETCFCWCFWELDIPISQLQDAGDVMIRAMDDSM 268
Query: 382 GKKPHD 387
+P D
Sbjct: 269 MVQPRD 274
>gi|384175852|ref|YP_005557237.1| CCA-adding enzyme [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349595076|gb|AEP91263.1| CCA-adding enzyme [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 397
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V DYF G +D+ + V VG P R QED LR+LR RF +++ + EE A
Sbjct: 123 DGKVLDYFGGKKDIDQKVIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEE---A 179
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL 749
I L ++S ER E K+L G S++ + ++ L
Sbjct: 180 IAKEKSLLSHVSVERKTIEFEKLLQGRASRQALQTLIQTRL 220
>gi|420161103|ref|ZP_14667874.1| tRNA adenylyltransferase [Weissella koreensis KCTC 3621]
gi|394745853|gb|EJF34671.1| tRNA adenylyltransferase [Weissella koreensis KCTC 3621]
Length = 406
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 29/190 (15%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
+G + D F+G DL++ VG R ED LR++R RF A++ N + E A
Sbjct: 128 NGEIVDLFDGLTDLRQQTLRAVGSADERFHEDALRMMRAVRFAAQLDFNLD---PETKLA 184
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYI---- 764
IKNN + L NIS ERI E K+L G ++ +L +L +T + EY+
Sbjct: 185 IKNNAELLQNISVERINVEFTKLLQGKNAQFGLLALL-----------STGLNEYMPGLN 233
Query: 765 ---VELMKYKEKSELIK---DFHKWRLPTFPMNGNIIR-QFFARICNNPNNHKEEVLSAI 817
++L Y E + + D W L F + + + F ++ N E++ I
Sbjct: 234 HTEIDLWGYAELLAVDQAHTDAEAWTLLAFELGLTTVDVKDFLKLWKQSN----ELIQTI 289
Query: 818 KKNLDGLHNI 827
+++LD L+ +
Sbjct: 290 QRSLDLLNQL 299
>gi|225870622|ref|YP_002746569.1| tRNA CCA-pyrophosphorylase [Streptococcus equi subsp. equi 4047]
gi|225700026|emb|CAW94050.1| CCA-adding enzyme [Streptococcus equi subsp. equi 4047]
Length = 404
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V D FNG EDLK + VG P R +ED LRI+R FRF A + + + E A
Sbjct: 129 DGQVIDIFNGLEDLKHKLLRAVGRPQERFEEDALRIMRGFRFAASL---DFDIEAETFEA 185
Query: 709 IKNNLDGLHNISGERIWTELNKIL 732
+K++ L IS ER + EL+K+L
Sbjct: 186 MKSHAPLLEKISIERSFIELDKLL 209
>gi|326519420|dbj|BAJ96709.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ +ES S++ D + D + + + I EL + S I P D
Sbjct: 289 RIVVACNESESYYHYRDNRVLPSHVDAELANAEAWWYKPECMINELNINSVITTPGHDEV 348
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGG+ + RV+VT+D G TW V + + ++W W
Sbjct: 349 LPINALTTQKPYTMKGYAYSGGGRKVTRVEVTLDGGETWQVCDLEHPERPTKYGKYWCWC 408
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++++L K+ D A N P+++
Sbjct: 409 FW---------SVEVEVLELLGAKEMAVRAWDEALNTQPERL 441
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++S+++ H K S W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 518 FTMSEVRRHAS-KDSAWIVVHGHVYDCTGFLKDHPGGADSILINAGSDCTEEFDAIHSAK 576
Query: 81 LQDEVFELLESYRIGNI-------SQEDSKLAAKDIASDPYVMEP 118
+ LLE YR+G + S + S I P V+ P
Sbjct: 577 ARG----LLEMYRVGELIVTGNDYSPQSSSADLAAIVEAPAVVVP 617
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE V+ G WG A+ W G RL DVL+ G+
Sbjct: 167 VCAGNRRKEQNMVRQSSGFNWGPGAISTTVWRGVRLRDVLRRCGV 211
>gi|325073087|gb|ADY76560.1| nitrate reductase, partial [uncultured Trichocladium]
gi|325073095|gb|ADY76564.1| nitrate reductase, partial [uncultured Trichocladium]
Length = 274
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 23/126 (18%)
Query: 285 AIQELPVISAICLPVADAKLKLE--NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
AI +L SAIC P D K+ L + +++GYA+SGGGK + R++VT+DQG++W +AN
Sbjct: 149 AIYDLNTNSAICYPAHDEKVPLTGGDESYKLKGYAYSGGGKRVTRLEVTLDQGKSWILAN 208
Query: 343 FTGQDSQ---AP---------LTRHW-----GWTLWRATIPV----DPKTKEVSIMDMLM 381
+ + Q AP L W W W IP+ D + MD M
Sbjct: 209 VSYPEDQYRTAPDGESLYGGRLDVSWRETCFCWCFWELDIPISQLQDAGDVMIRAMDDSM 268
Query: 382 GKKPHD 387
+P D
Sbjct: 269 MVQPRD 274
>gi|16079302|ref|NP_390126.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis subsp. subtilis str.
168]
gi|221310161|ref|ZP_03592008.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis subsp. subtilis str.
168]
gi|221314483|ref|ZP_03596288.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319405|ref|ZP_03600699.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323681|ref|ZP_03604975.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|418032596|ref|ZP_12671079.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|430758426|ref|YP_007209220.1| CCA-adding enzyme [Bacillus subtilis subsp. subtilis str. BSP1]
gi|452915388|ref|ZP_21964014.1| CCA-adding enzyme [Bacillus subtilis MB73/2]
gi|1709578|sp|P42977.2|CCA_BACSU RecName: Full=CCA-adding enzyme; AltName: Full=CCA tRNA
nucleotidyltransferase; AltName: Full=tRNA
CCA-pyrophosphorylase; AltName: Full=tRNA
adenylyl-/cytidylyl- transferase; AltName: Full=tRNA
nucleotidyltransferase; AltName: Full=tRNA-NT
gi|1146238|gb|AAB38446.1| poly(A) polymerase [Bacillus subtilis]
gi|2634663|emb|CAB14161.1| tRNA nucleotidyltransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|351471459|gb|EHA31580.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959486|dbj|BAM52726.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis BEST7613]
gi|407965062|dbj|BAM58301.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis BEST7003]
gi|430022946|gb|AGA23552.1| CCA-adding enzyme [Bacillus subtilis subsp. subtilis str. BSP1]
gi|452115736|gb|EME06132.1| CCA-adding enzyme [Bacillus subtilis MB73/2]
Length = 397
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V DYF G +D+ + V VG P R QED LR+LR RF +++ + EE A
Sbjct: 123 DGKVLDYFGGKKDIDQKVIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEE---A 179
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL 749
I L ++S ER E K+L G S++ + ++ L
Sbjct: 180 IAKEKSLLSHVSVERKTIEFEKLLQGRASRQALQTLIQTRL 220
>gi|326505706|dbj|BAJ95524.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ +ES S++ D + D + + + I EL + S I P D
Sbjct: 289 RIVVACNESESYYHYRDNRVLPSHVDAELANAEAWWYKPECMINELNINSVITTPGHDEV 348
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGG+ + RV+VT+D G TW V + + ++W W
Sbjct: 349 LPINALTTQKPYTMKGYAYSGGGRKVTRVEVTLDGGETWQVCDLEHPERPTKYGKYWCWC 408
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++++L K+ D A N P+++
Sbjct: 409 FW---------SVEVEVLELLGAKEMAVRAWDEALNTQPERL 441
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 23 YSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGVH 80
+++S+++ H K S W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 518 FTMSEVRRHAS-KDSAWIVVHGHVYDCTGFLKDHPGGADSILINAGSDCTEEFDAIHSAK 576
Query: 81 LQDEVFELLESYRIGNI-------SQEDSKLAAKDIASDPYVMEP 118
+ LLE YR+G + S + S I P V+ P
Sbjct: 577 ARG----LLEMYRVGELIVTGNDYSPQSSSADLAAIVEAPAVVVP 617
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE V+ G WG A+ W G RL DVL+ G+
Sbjct: 167 VCAGNRRKEQNMVRQSSGFNWGPGAISTTVWRGVRLRDVLRRCGV 211
>gi|325072817|gb|ADY76425.1| nitrate reductase, partial [uncultured Trichocladium]
Length = 280
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 23/131 (17%)
Query: 285 AIQELPVISAICLPVADAKLKLE--NHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
AI +L SAIC P D K+ L N +++GYA++GGGK + R++VT+DQGR+W +AN
Sbjct: 149 AIYDLNTNSAICYPAHDEKVPLTGGNESYKLKGYAYAGGGKRVSRLEVTLDQGRSWILAN 208
Query: 343 FTGQDSQ---AP---------LTRHW-----GWTLWRATIPV----DPKTKEVSIMDMLM 381
+ + Q AP + W W W IP+ D + MD M
Sbjct: 209 VSYPEDQYRAAPDGELLYGGRVDVSWRETCFCWCFWELGIPLSQLQDAGDVMIRAMDDSM 268
Query: 382 GKKPHDIDFAT 392
+P D+ ++
Sbjct: 269 MVQPRDMYWSV 279
>gi|384914618|ref|ZP_10015402.1| tRNA nucleotidyltransferase/poly(A) polymerase [Methylacidiphilum
fumariolicum SolV]
gi|384527503|emb|CCG91270.1| tRNA nucleotidyltransferase/poly(A) polymerase [Methylacidiphilum
fumariolicum SolV]
Length = 441
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 644 RSFRLDGTVYD--------YFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARIC 695
R F ++G YD Y G ED++K + +GDP R +ED+LR+LR RF ++
Sbjct: 109 RDFTINGIFYDPIADQIIDYVKGTEDIEKKIIRAIGDPKKRFEEDHLRMLRAIRFAVQLS 168
Query: 696 NNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKIL 732
+E +AI+ + + NIS ERI EL+KI
Sbjct: 169 FRI---EENTWNAIRQSAQAILNISAERIREELDKIF 202
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 26/32 (81%)
Query: 375 SIMDMLMGKKPHDIDFATNATPDQMKAMFAEE 406
+ D+L+ K+PHDID AT+ATP++++ +F ++
Sbjct: 25 CVRDILLEKEPHDIDIATSATPEEVQQLFKDK 56
>gi|430746615|ref|YP_007205744.1| tRNA nucleotidyltransferase/poly(A) polymerase [Singulisphaera
acidiphila DSM 18658]
gi|430018335|gb|AGA30049.1| tRNA nucleotidyltransferase/poly(A) polymerase [Singulisphaera
acidiphila DSM 18658]
Length = 449
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFA--RICNNPNNHKEEVLS 707
G + DY G DL V +GDP +R +ED LR+LR RF A R+ +P H S
Sbjct: 130 GEIIDYVGGRADLDARVLRAIGDPWARFREDKLRLLRAIRFAARFRLAIDPATH-----S 184
Query: 708 AIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
A+ + +H ++ ERI EL ++L E M +ML L+
Sbjct: 185 ALVTMANQIHVVAAERIAQELRRMLVHESRSEAMNRMLECGLV 227
>gi|195978215|ref|YP_002123459.1| tRNA CCA-pyrophosphorylase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195974920|gb|ACG62446.1| CCA-adding enzyme, tRNA nucleotidyltransferase [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 398
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG + D FNG EDLK + VG P R +ED LRI+R FRF A + + + E A
Sbjct: 123 DGQIIDIFNGLEDLKHKLLRAVGRPQERFEEDALRIMRGFRFAASL---DFDIEAETFEA 179
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKML 745
+K++ L IS ER + EL+K+L ++ +L M+
Sbjct: 180 MKSHAPLLEKISVERSFIELDKLLMAPKWRKGILAMI 216
>gi|428279710|ref|YP_005561445.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis subsp. natto BEST195]
gi|291484667|dbj|BAI85742.1| tRNA CCA-pyrophosphorylase [Bacillus subtilis subsp. natto BEST195]
Length = 397
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSA 708
DG V DYF G +D+ + V VG P R QED LR+LR RF +++ + EE A
Sbjct: 123 DGKVLDYFGGKKDIDQKVIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEE---A 179
Query: 709 IKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNL 749
I L ++S ER E K+L G S++ + ++ L
Sbjct: 180 IAKEKSLLSHVSVERKTIEFEKLLQGRASRQALQTLIQTRL 220
>gi|366086016|ref|ZP_09452501.1| CCA-adding enzyme (tRNA nucleotidyltransferase) (tRNA
adenylyl-/cytidylyl-transferase) (tRNA
CCA-pyrophosphorylase) (tRNA-NT) [Lactobacillus zeae
KCTC 3804]
Length = 361
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 645 SFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE 704
+ R DGT+ D F+G DLKK VGDP R ED LR++R RF +++ + +E
Sbjct: 87 AVRHDGTIIDLFDGLTDLKKHQLRAVGDPHERFHEDALRMMRAVRFESQLGFHIEPATKE 146
Query: 705 VLSAIKNNLDGLHNISGERIWTELNKILGG 734
++A N L +IS ERI E N++L G
Sbjct: 147 AITA---NAPLLKHISVERIAAEFNRLLIG 173
>gi|298292458|ref|YP_003694397.1| polynucleotide adenylyltransferase [Starkeya novella DSM 506]
gi|296928969|gb|ADH89778.1| Polynucleotide adenylyltransferase region [Starkeya novella DSM
506]
Length = 408
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 650 GTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAI 709
G + D G D + G F+GD RI+EDYLRILR FRF A E+ L+A
Sbjct: 135 GELIDLVGGEADARAGRVRFIGDADVRIREDYLRILRLFRFHA--AYGKGALDEDALAAA 192
Query: 710 KNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL 750
N +GL +S ER+ E+ K+L + E + +M LL
Sbjct: 193 VRNREGLDRLSRERVRAEMMKLLVAPRAAETLAQMEAAGLL 233
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 898 ITTLRIDVTTDGRHAEVQFTEDWKLDANRRDLTVNSMFL 936
+TTLR DV TDGR A V F +W DA RRD T+N+++L
Sbjct: 93 VTTLREDVETDGRRARVVFGRNWAHDAQRRDFTMNALYL 131
>gi|357137923|ref|XP_003570548.1| PREDICTED: nitrate reductase [NAD(P)H]-like [Brachypodium
distachyon]
Length = 905
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 249 KVILSDHESTSHWQQNDYKGFSPSTDWDTVD-----FAKSPAIQELPVISAICLPVADAK 303
+++++ +ES S++ D + D + + + I EL + S I P D
Sbjct: 292 RIVVACNESESYYHYRDNRVLPSHVDAELANAEAWWYKPECMINELNINSVIATPGHDEV 351
Query: 304 LKLENHQME----VQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWT 359
L + + ++GYA+SGGG+ + RV+VT+D G TW V + ++W W
Sbjct: 352 LPINALTTQKPYTMKGYAYSGGGRKVTRVEVTLDGGETWQVCALEHPERPTKYGKYWCWC 411
Query: 360 LWRATIPVDPKTKEVSIMDMLMGKK--PHDIDFATNATPDQM 399
W + EV ++++L K+ D A N P+++
Sbjct: 412 FW---------SVEVEVLELLGAKEMAVRAWDEAMNTQPEKL 444
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 22 WYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG--EIIMKAAGGSIEPFWAMYGV 79
+Y++S+++ H + S W+V VYD T F++ HPGG I++ A E F A++
Sbjct: 525 YYAMSEVRRHAS-RESAWIVVHGHVYDCTGFLKDHPGGADSILINAGTDCTEEFDAIHSA 583
Query: 80 HLQDEVFELLESYRIGNI 97
+ LLE YR+G +
Sbjct: 584 KARG----LLEMYRVGEL 597
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGI 465
VCA KE V+ G WG AV + W GARL DVL+ G+
Sbjct: 167 VCAGNRRKEQNMVRQSVGFNWGPGAVSTSVWRGARLRDVLRRCGV 211
>gi|335357294|ref|ZP_08549164.1| tRNA CCA-pyrophosphorylase [Lactobacillus animalis KCTC 3501]
Length = 403
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Query: 649 DGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRILRYFRFFARICNNPNNHKEE--VL 706
DGTV D F+G +DLK VGDP R ED LR++R RF +++ + K E L
Sbjct: 128 DGTVIDMFSGLDDLKNKTIRAVGDPTERFFEDALRMMRTVRFASQL-----DFKIEPKTL 182
Query: 707 SAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLLLFSKLKATTMREYIVE 766
AIK N L I+ ERI E K+L G + + L L + AT RE +
Sbjct: 183 QAIKANAHLLEKIAVERIQVEWIKLLLGKNVVQGLDAFLETELFKYCPQFAT--REQALR 240
Query: 767 LMKYKEKSELIKDFHKWRLP--TFPMNGNIIRQFFA--RICNNPNNHKEEVLSAIKK 819
+ + +L+ + W L F + +R F + N+ + + VLS +++
Sbjct: 241 KIAKLPQLKLVDELECWALLAYVFELTPKQVRSFLKAWKTSNDISMEVQNVLSILEQ 297
>gi|325072843|gb|ADY76438.1| nitrate reductase, partial [uncultured Arthrinium]
Length = 274
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 23/126 (18%)
Query: 285 AIQELPVISAICLPVADAKLKLEN--HQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVAN 342
AI +L SA C P D KL V+GYA++GGGK + RV++T+D+G+TW +AN
Sbjct: 149 AIYDLNTNSATCYPAHDEKLSTVGTAKSYVVRGYAYAGGGKRVTRVEITLDKGKTWSLAN 208
Query: 343 -----------------FTGQDSQAPLTRHWGWTLWRATIPVDPKTKE----VSIMDMLM 381
+ G+ A + W W IP+D T+ V MD M
Sbjct: 209 ISYPEDEYRLASDDEALYGGRLDMAWRESCFCWCFWDLDIPIDSLTRADDIMVRAMDESM 268
Query: 382 GKKPHD 387
+P D
Sbjct: 269 MVQPRD 274
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,290,442,526
Number of Sequences: 23463169
Number of extensions: 660745561
Number of successful extensions: 1601643
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3706
Number of HSP's successfully gapped in prelim test: 3614
Number of HSP's that attempted gapping in prelim test: 1581767
Number of HSP's gapped (non-prelim): 20721
length of query: 939
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 787
effective length of database: 8,792,793,679
effective search space: 6919928625373
effective search space used: 6919928625373
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)