Query psy11686
Match_columns 939
No_of_seqs 738 out of 5352
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 16:18:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11686.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11686hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1sox_A Sulfite oxidase; oxidor 100.0 6.1E-82 2.1E-86 727.9 27.9 387 18-521 2-465 (466)
2 2a9d_A Sulfite oxidase; molybd 100.0 3.9E-63 1.3E-67 556.0 21.9 296 112-521 1-371 (372)
3 1ogp_A Sulfite oxidase; oxidor 100.0 3.4E-60 1.2E-64 535.7 19.9 255 110-369 6-347 (393)
4 2bih_A Nitrate reductase [NADP 100.0 1.4E-58 4.7E-63 528.9 14.8 309 119-542 41-449 (474)
5 2bii_A Nitrate reductase [NADP 100.0 1.8E-58 6E-63 523.8 12.8 300 128-542 1-399 (424)
6 2blf_A SORA, sulfite\:cytochro 100.0 1.2E-56 4.1E-61 503.6 17.2 245 113-369 14-332 (373)
7 2xts_A Sulfite dehydrogenase; 100.0 5.2E-50 1.8E-54 450.6 17.8 258 113-388 32-356 (390)
8 3h38_A TRNA nucleotidyl transf 100.0 3.4E-37 1.1E-41 353.7 12.7 250 543-818 38-318 (441)
9 1ou5_A TRNA CCA-adding enzyme, 100.0 6E-35 2.1E-39 336.8 17.9 242 543-817 74-341 (448)
10 1vfg_A A-adding enzyme, poly A 100.0 3.7E-35 1.2E-39 334.5 12.3 250 543-815 14-292 (390)
11 1miw_A TRNA CCA-adding enzyme; 100.0 2.4E-35 8.3E-40 336.7 7.4 243 543-817 23-285 (404)
12 3aql_A Poly(A) polymerase; tra 100.0 2.8E-34 9.6E-39 328.3 6.3 187 543-756 36-253 (415)
13 1xdy_A Bacterial sulfite oxida 100.0 1.4E-31 4.8E-36 289.8 -3.6 202 124-339 20-291 (298)
14 2a9d_A Sulfite oxidase; molybd 99.9 1.2E-27 4.2E-32 268.4 5.9 161 403-564 71-268 (372)
15 2blf_A SORA, sulfite\:cytochro 99.9 5.3E-27 1.8E-31 263.4 8.7 159 403-564 84-278 (373)
16 1ogp_A Sulfite oxidase; oxidor 99.9 3.4E-27 1.2E-31 266.6 6.1 160 403-563 79-280 (393)
17 1sox_A Sulfite oxidase; oxidor 99.9 8.8E-27 3E-31 268.8 5.7 161 403-564 165-362 (466)
18 2bih_A Nitrate reductase [NADP 99.9 2.9E-26 9.9E-31 262.5 7.1 162 403-565 109-309 (474)
19 2bii_A Nitrate reductase [NADP 99.9 3E-26 1E-30 260.1 6.7 161 403-564 59-258 (424)
20 2xts_A Sulfite dehydrogenase; 99.9 5E-25 1.7E-29 247.9 5.5 159 403-563 101-278 (390)
21 1ou5_A TRNA CCA-adding enzyme, 99.8 8.9E-21 3E-25 218.8 4.5 96 838-938 74-176 (448)
22 1mj4_A Sulfite oxidase; cytoch 99.8 3E-20 1E-24 165.0 4.3 79 18-97 2-82 (82)
23 3ner_A Cytochrome B5 type B; h 99.8 8.3E-20 2.8E-24 165.4 6.7 84 16-102 5-89 (92)
24 3h38_A TRNA nucleotidyl transf 99.8 5.9E-20 2E-24 210.8 7.0 95 838-938 38-140 (441)
25 1miw_A TRNA CCA-adding enzyme; 99.8 6.9E-20 2.4E-24 209.2 7.1 92 838-938 23-122 (404)
26 1cyo_A Cytochrome B5; electron 99.8 2.7E-19 9.1E-24 162.5 6.7 82 18-102 2-84 (93)
27 1hko_A Cytochrome B5; electron 99.8 4.1E-19 1.4E-23 164.3 6.1 85 15-102 3-88 (104)
28 2ibj_A Cytochrome B5, CYTB5; F 99.8 4.2E-19 1.4E-23 159.8 5.1 82 17-101 3-85 (88)
29 3lf5_A Cytochrome B5 reductase 99.7 2E-19 6.9E-24 161.5 2.7 82 17-101 2-84 (88)
30 1cxy_A Cytochrome B5; helix, b 99.7 1.3E-18 4.4E-23 157.2 6.7 82 17-99 4-88 (90)
31 1vfg_A A-adding enzyme, poly A 99.7 2.1E-18 7.2E-23 196.4 6.3 94 838-938 14-115 (390)
32 1x3x_A Cytochrome B5; hemoprot 99.7 2.2E-18 7.6E-23 153.0 4.8 76 20-98 3-82 (82)
33 1xdy_A Bacterial sulfite oxida 99.7 3.6E-18 1.2E-22 185.0 6.2 132 403-554 82-255 (298)
34 3aql_A Poly(A) polymerase; tra 99.7 4.5E-18 1.5E-22 194.5 6.3 95 838-938 36-145 (415)
35 2keo_A Probable E3 ubiquitin-p 99.7 1.2E-18 4E-23 162.9 -2.0 85 15-102 18-103 (112)
36 1kbi_A Cytochrome B2, L-LCR; f 99.4 1.8E-13 6.2E-18 160.4 6.4 83 17-102 5-89 (511)
37 1j03_A Putative steroid bindin 99.1 5E-11 1.7E-15 109.7 4.2 54 21-75 3-59 (102)
38 3pe9_A Fibronectin(III)-like m 98.1 3.6E-06 1.2E-10 76.8 6.0 75 294-386 3-79 (98)
39 3pdd_A Glycoside hydrolase, fa 93.7 0.052 1.8E-06 55.2 4.7 74 294-386 3-79 (190)
40 3pdd_A Glycoside hydrolase, fa 87.8 1.3 4.5E-05 44.7 8.3 78 290-385 91-170 (190)
41 4fj6_A Glycoside hydrolase fam 32.6 45 0.0015 38.8 5.8 63 279-343 304-370 (523)
42 1ms9_A Trans-sialidase; trans- 25.0 75 0.0026 37.9 5.9 53 291-345 186-238 (648)
43 1w0p_A Sialidase; hydrolase, n 24.2 90 0.0031 38.1 6.6 54 290-344 540-600 (781)
44 3a72_A EXO-arabinanase; arabin 23.2 1.1E+02 0.0037 33.6 6.5 36 308-343 97-133 (355)
45 3a72_A EXO-arabinanase; arabin 22.0 1.2E+02 0.004 33.3 6.4 20 324-343 50-69 (355)
46 2fcl_A Hypothetical protein TM 20.8 56 0.0019 32.1 3.1 57 811-874 16-76 (169)
47 2ydt_A EXO-1,5-alpha-L-arabino 20.7 1.3E+02 0.0044 33.2 6.4 20 324-343 55-74 (367)
48 1so7_A Sialidase 2; neuraminid 20.3 1.3E+02 0.0045 32.7 6.5 49 293-343 158-213 (382)
No 1
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=100.00 E-value=6.1e-82 Score=727.86 Aligned_cols=387 Identities=43% Similarity=0.760 Sum_probs=347.3
Q ss_pred CCCCCcCHHHHhhccCCCCC-eEEEEcCeEeecccchhcCCCc-hHHHHhhcCCchhhhhccCCCChHHHHHHhhcCccc
Q psy11686 18 STLPWYSLSDIQNHKDLKSS-IWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIG 95 (939)
Q Consensus 18 ~~~~~~t~~ev~~h~~~~~~-~wvii~g~VYDvT~f~~~HPGG-~~il~~aG~d~~~~~~~~~~~hs~~a~~~l~~~~VG 95 (939)
++++.||++||++||+.+ + |||+|+|+|||||+|++.|||| +.|+.++|+|++.|++.+..|||..++++|++|+||
T Consensus 2 ~~~~~~t~~Ev~~H~~~~-d~~Wvii~g~VYDvT~fl~~HPGG~~~il~~aG~DT~~f~~~~~~~Hs~~a~~~L~~~~IG 80 (466)
T 1sox_A 2 PSYPEYTREEVGRHRSPE-ERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVHGEPHVLELLQQYKVG 80 (466)
T ss_dssp -CCCEECHHHHTTCEETT-TEEEEEETTEEEECTTTTTTSTTCHHHHGGGTTSBSHHHHHHSGGGGSHHHHHHHHTTEEE
T ss_pred CCCCeeCHHHHHHhcCCC-CceEEEECCEEEechHhHhhCcCCcccchhhcCCccccccccccccCCHHHHHHHHhCceE
Confidence 356899999999999874 6 9999999999999999999999 899999999988887655578999999999999999
Q ss_pred ccCccchhhhhcccCCCCCccCCCCccccccccCCCCCCCCCCCccccccccCCCCceEee-----------EEEEEeec
Q psy11686 96 NISQEDSKLAAKDIASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSLLSQVGS-----------STITLDQA 164 (939)
Q Consensus 96 ~l~~~~~~~~~~~~~~d~~~~dP~r~p~l~v~~~~P~n~e~p~~~l~~~~~TP~~~~~v~~-----------w~l~v~~G 164 (939)
.|.+++.... . ...+++.++|.|+|.|++++.+|||+|||++.|.+++|||+++||+|| |+|+|+ |
T Consensus 81 ~l~~~~~~~~-~-~~~~~~~~~p~~~~~l~~~~~~p~n~E~p~~~l~~~~iTp~~~~yvr~h~~vP~id~~~w~L~V~-G 157 (466)
T 1sox_A 81 ELSPDEAPAA-P-DAQDPFAGDPPRHPGLRVNSQKPFNAEPPAELLAERFLTPNELFFTRNHLPVPAVEPSSYRLRVD-G 157 (466)
T ss_dssp EECCCCCCC--C-SSSCTTTTCCCCCTTSEEEETTTTEEECCHHHHTSSSSCCGGGSCEECSSCCCCCCGGGCEEEEE-C
T ss_pred Eecccccccc-c-cccCccccCCCcCcceEEccCCCcccCCChHHhccccccccccEEEccCCCCCccCCCCeEEEEe-c
Confidence 9988775432 2 257899999999999999999999999999999889999999999999 999999 9
Q ss_pred ccCCcceeeeHHHHHHhccc-------eeccccC---------------------ccCccccHHHHHhCCCCC-------
Q psy11686 165 IVSKQLSSFKHSDEKLKLVK-------VMAGNIS---------------------QEDSKLAAKDIASDPYVM------- 209 (939)
Q Consensus 165 ~v~~~p~~~t~~dl~~~~p~-------~C~gn~~---------------------~~~~~~~~~~vL~~~g~~------- 209 (939)
+|++ |++||++||+++||+ +|+||+| ..|+|++++|||++||+.
T Consensus 158 ~V~~-p~~ltl~dL~~~lp~~~~~~~l~C~gN~r~~~~~~~~v~G~~W~~gai~~~~W~Gv~L~dlL~~ag~~~~~~~a~ 236 (466)
T 1sox_A 158 PGGG-TLSLSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGFPEELQGEW 236 (466)
T ss_dssp TTSC-CEEEEHHHHHHHSCEEEEEEEEECTTTTHHHHHTTSCCSSCCCCTTSEEEEEEEEEEHHHHHHHTTCCSCCSSCC
T ss_pred ccCC-ceEeeHHHHHhhCCCeEEEEEEEecCCCcccccccccccccccccCceecceEEEEEHHHHHHHcCCCCCCCCcE
Confidence 9998 999999999967999 9999974 357788899999999984
Q ss_pred -------C------CC--CcchhhhcCC-------CCCCCCCCCCC-CCCceEeeCC------cceeeeEEEeecCCCCc
Q psy11686 210 -------E------PV--RSPLLKATSL-------KPYNAEPPPSM-LYSSLLRIPF------CSHTGKVILSDHESTSH 260 (939)
Q Consensus 210 -------d------~~--~ipl~~a~~~-------~~mNGepLp~~-G~PlRlvvPg------vKWl~~I~~~~~~~~g~ 260 (939)
| +| ||||++||++ |+|||||||++ |||||||||| ||||++|+|++++++||
T Consensus 237 ~V~~~~~D~~~~~~~Y~~sipl~~a~~p~~~~lLA~~mNGepL~~~hG~PlRlvvPg~~G~~svKwl~~I~v~~~~~~~~ 316 (466)
T 1sox_A 237 HVCFEGLDADPGGAPYGASIPYGRALSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSH 316 (466)
T ss_dssp EEEEEEEEECTTCCEEEEEEEHHHHHCTTTCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCSH
T ss_pred EEEEEecCCCCCCCCEEEEeEHHHHhCCCCCEEEEECcCCeECChhcCceEEEEecchhheeeeeeccEEEEEeCCCCCc
Confidence 2 22 5999999973 99999999999 9999999999 99999999999999999
Q ss_pred ccccCCCccCCCCCCCCccCCCCCCcccccceEEEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEE
Q psy11686 261 WQQNDYKGFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHV 340 (939)
Q Consensus 261 w~~~~Y~~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~ 340 (939)
||++||+.++|..+.+.++|...++|++|+|||+|+.|.+|++|+. |+++|+||||||||++|+|||||+|||+||+.
T Consensus 317 w~~~~Y~~~~p~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~--g~~~v~G~A~sggg~~I~rVEVS~DgG~tW~~ 394 (466)
T 1sox_A 317 WQQNDYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVPP--GELTVKGYAWSGGGREVVRVDVSLDGGRTWKV 394 (466)
T ss_dssp HHHSSSCCCCTTCCTTTCCGGGSCCCCBCCCEEEEEESCTTCEECS--EEEEEEEEEECSTTCCEEEEEEESBTTSSCEE
T ss_pred ceecCceecCCCCCccccccccccccccccccEEEecCCCCCEecc--ceEEEEEEEEcCCCCCEEEEEEEcCCCCcceE
Confidence 9999999999988877777888899999999999999999999984 79999999999989999999999999999999
Q ss_pred eeeCCCCCCCCCCCceeEEEeEEEeecCCCCceeeeeecccCCCCCCcccccccChHHHhhcccHHHHhhccccCcceee
Q psy11686 341 ANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGT 420 (939)
Q Consensus 341 A~l~~~~~~~~~~~~~~W~~W~~~~~~~~~~~~vra~d~~~~~~p~~~d~~~~~~~~~l~~~f~~~~l~~~p~~~~~~~l 420 (939)
|+|.++..+ ..++|||++|+++|++++++.
T Consensus 395 A~l~~~~~~--~~~~~~W~~W~~~~~~~~g~~------------------------------------------------ 424 (466)
T 1sox_A 395 ARLMGDKAP--PGRAWAWALWELTVPVEAGTE------------------------------------------------ 424 (466)
T ss_dssp CEECSCCCC--TTCCCSCEEEEEEEEECTTCE------------------------------------------------
T ss_pred eecCCcccc--cCCccEEEEEEEeEEcCCCCE------------------------------------------------
Confidence 999976532 457899999999998876521
Q ss_pred ccCCCCCCCccccCCCCCCCcccceeeeeeeccccHHHHHHHcCCCCCCCcCCCCCceeeEEeeeeecccCCCCCCCCCC
Q psy11686 421 VCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVEIWSKAVDSSYNTQPESFA 500 (939)
Q Consensus 421 ~Cagn~r~~~~~~~~~~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~~~~~~~g~d~~~~~~~~~~~a~d~~~Ng~pl~~~ 500 (939)
..+.+||+|..+|.||....
T Consensus 425 ------------------------------------------------------------~~i~~RA~D~~g~~QP~~~~ 444 (466)
T 1sox_A 425 ------------------------------------------------------------LEIVCKAVDSSYNVQPDSVA 444 (466)
T ss_dssp ------------------------------------------------------------EEEEEEEEETTCCBCCSCSG
T ss_pred ------------------------------------------------------------EEEEEEEEcCCCCcCCCCcc
Confidence 44568999999999998766
Q ss_pred CCCCcceeecceeeEEEEEEe
Q psy11686 501 NIWNLRGVLSNAYHRVRVEIW 521 (939)
Q Consensus 501 ~g~p~R~vvp~~~~~~~i~~~ 521 (939)
.-||+|+++.|.||+++|+|.
T Consensus 445 ~~wn~~G~~~n~~~~v~v~v~ 465 (466)
T 1sox_A 445 PIWNLRGVLSTAWHRVRVSVQ 465 (466)
T ss_dssp GGCCTTCCCCCSCEEEEEEEC
T ss_pred CCcCCCCcccceEEEEEEEEe
Confidence 679999999999999999886
No 2
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=100.00 E-value=3.9e-63 Score=555.97 Aligned_cols=296 Identities=44% Similarity=0.738 Sum_probs=265.7
Q ss_pred CCCccCCCCccccccccCCCCCCCCCCCccccccccCCCCceEee-----------EEEEEeecccCCcceeeeHHHHHH
Q psy11686 112 DPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSLLSQVGS-----------STITLDQAIVSKQLSSFKHSDEKL 180 (939)
Q Consensus 112 d~~~~dP~r~p~l~v~~~~P~n~e~p~~~l~~~~~TP~~~~~v~~-----------w~l~v~~G~v~~~p~~~t~~dl~~ 180 (939)
|||.++|.|++.|++++.+|||+|||++.|.+++|||+++||+|| |+|+|+ |+|++ |++||++||++
T Consensus 1 ~p~~~~p~r~~~l~~~~~~P~n~E~p~~~l~~~~iTP~~~~yvr~h~~vP~id~~~w~L~V~-G~V~~-p~~ltl~dL~~ 78 (372)
T 2a9d_A 1 DPFAGDPPRHPGLRVNSQKPFNAEPPAELLAERFLTPNELFFTRNHLPVPAVEPSSYRLRVD-GPGGR-TLSLSLAELRS 78 (372)
T ss_dssp CTTTTCCCCCTTSEEEETTTTEEECCHHHHTSSSSCCTTTSCEECSSCCCCCCTTTCEEEEE-CC----CEEEEHHHHHH
T ss_pred CCCCcCCCCCCCceEcCCCCCccCCChHHhccCCcCCchheeEecCCCCCcccCCCeEEEEE-eEcCC-ceEEeHHHHHh
Confidence 578889999999999999999999999999889999999999999 999999 99998 99999999996
Q ss_pred hccc-------eeccccC---------------------ccCccccHHHHHhCCCCC--------------C------CC
Q psy11686 181 KLVK-------VMAGNIS---------------------QEDSKLAAKDIASDPYVM--------------E------PV 212 (939)
Q Consensus 181 ~~p~-------~C~gn~~---------------------~~~~~~~~~~vL~~~g~~--------------d------~~ 212 (939)
+||+ +|+||+| ..|+|++++|||++||+. | +|
T Consensus 79 ~lp~~~~~~~l~C~gN~r~~~~~~~~v~G~~w~~gav~~~~W~GV~L~dlL~~ag~~~~~~~a~~V~~~~~D~~~~~~~Y 158 (372)
T 2a9d_A 79 RFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGFPEELQGEWHVCFEGLDADPGGAPY 158 (372)
T ss_dssp HSCCEEEEEEEECTTTTHHHHHTTSCCSSCCCCTTSEEEEEEEEEEHHHHHHHTTCCSCCSSCCEEEEEEEEECTTCCEE
T ss_pred hCCCeEEEEEEEecCCchhhccccccccccccccCceecceEEeEEHHHHHHhcCCCcCCCCcEEEEEEecCCCCCCCCe
Confidence 7999 9999974 357888899999999984 2 22
Q ss_pred --CcchhhhcCC-------CCCCCCCCCCC-CCCceEeeCC------cceeeeEEEeecCCCCcccccCCCccCCCCCCC
Q psy11686 213 --RSPLLKATSL-------KPYNAEPPPSM-LYSSLLRIPF------CSHTGKVILSDHESTSHWQQNDYKGFSPSTDWD 276 (939)
Q Consensus 213 --~ipl~~a~~~-------~~mNGepLp~~-G~PlRlvvPg------vKWl~~I~~~~~~~~g~w~~~~Y~~~~~~~~~~ 276 (939)
||||++||++ |+|||||||++ |||||||||| ||||++|+|++++++||||++||+.++|..+.+
T Consensus 159 ~~sipl~~a~dp~~d~lLA~~mNGepL~~~hG~PlRlVvPg~~G~ksvKwl~~I~v~~~~~~~~w~~~~Y~~~~p~~~~~ 238 (372)
T 2a9d_A 159 GASIPYGRALSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQNDYKGFSPCVDWD 238 (372)
T ss_dssp EEEEEHHHHHCGGGCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCCHHHHSSSCCCCTTCCTT
T ss_pred EEEeEHHHHhCCCCCEEEEECCCCeECCcccCceEEEEecchhheeecceeeEEEEeccCCCCcceecceeEcCCCCCcc
Confidence 5999999983 99999999999 9999999999 999999999999999999999999999988877
Q ss_pred CccCCCCCCcccccceEEEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeeeCCCCCCCCCCCce
Q psy11686 277 TVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHW 356 (939)
Q Consensus 277 ~~~~~~~~~i~~~~v~S~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l~~~~~~~~~~~~~ 356 (939)
.++|...++|++|+|||+|+.|.+|++|+. ++++|+||||||||++|+|||||+|||+||+.|+|.++.. +..++|
T Consensus 239 ~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~--g~~~v~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~~--~~~~~~ 314 (372)
T 2a9d_A 239 TVDYRTAPAIQELPVQSAVTQPRPGAAVPP--GELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKA--PPGRAW 314 (372)
T ss_dssp TCCGGGSCCCCBCCCEEEEEESCTTCEECS--EEEEEEEEEECSTTCCEEEEEEESBSSSSCEECEECSCCC--CTTCCC
T ss_pred ccccccCcccccccccEEEecCCCCCEecc--ceEEEEEEEEcCCCCCEEEEEEEcCCCCcceEeEcCCccc--ccCCcc
Confidence 777888899999999999999999999984 7999999999998999999999999999999999997653 245789
Q ss_pred eEEEeEEEeecCCCCceeeeeecccCCCCCCcccccccChHHHhhcccHHHHhhccccCcceeeccCCCCCCCccccCCC
Q psy11686 357 GWTLWRATIPVDPKTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPV 436 (939)
Q Consensus 357 ~W~~W~~~~~~~~~~~~vra~d~~~~~~p~~~d~~~~~~~~~l~~~f~~~~l~~~p~~~~~~~l~Cagn~r~~~~~~~~~ 436 (939)
||++|+++|++++++.
T Consensus 315 ~W~~W~~~~~~~~g~~---------------------------------------------------------------- 330 (372)
T 2a9d_A 315 AWALWELTVPVEAGTE---------------------------------------------------------------- 330 (372)
T ss_dssp SCEEEEEEEEECTTCE----------------------------------------------------------------
T ss_pred EEEEEEEeEEcCCCCE----------------------------------------------------------------
Confidence 9999999998876521
Q ss_pred CCCCcccceeeeeeeccccHHHHHHHcCCCCCCCcCCCCCceeeEEeeeeecccCCCCCCCCCCCCCCcceeecceeeEE
Q psy11686 437 KGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGVLSNAYHRV 516 (939)
Q Consensus 437 ~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~~~~~~~g~d~~~~~~~~~~~a~d~~~Ng~pl~~~~g~p~R~vvp~~~~~~ 516 (939)
..+.++|+|..+|.||.....-||+|+++.|.||++
T Consensus 331 --------------------------------------------~~i~~RA~D~~g~~QP~~~~~~wn~~G~~~n~~~~v 366 (372)
T 2a9d_A 331 --------------------------------------------LEIVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRV 366 (372)
T ss_dssp --------------------------------------------EEEEEEEEETTCCBCCSCSGGGCCTTCCCCCSCEEE
T ss_pred --------------------------------------------EEEEEEEEcCCCCcCCCCccCCcCCCCcccceEEEE
Confidence 445689999999999987666799999999999999
Q ss_pred EEEEe
Q psy11686 517 RVEIW 521 (939)
Q Consensus 517 ~i~~~ 521 (939)
+|+|.
T Consensus 367 ~v~v~ 371 (372)
T 2a9d_A 367 RVSVQ 371 (372)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99885
No 3
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=100.00 E-value=3.4e-60 Score=535.66 Aligned_cols=255 Identities=30% Similarity=0.472 Sum_probs=230.0
Q ss_pred CCCCCccCCCCccccccccCCCCCCCCCCCccccccccCCCCceEee------------EEEEEeecccCCcceeeeHHH
Q psy11686 110 ASDPYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSLLSQVGS------------STITLDQAIVSKQLSSFKHSD 177 (939)
Q Consensus 110 ~~d~~~~dP~r~p~l~v~~~~P~n~e~p~~~l~~~~~TP~~~~~v~~------------w~l~v~~G~v~~~p~~~t~~d 177 (939)
++++|..+|.+++.|++++.+|||+|||+..|.+++|||+++||+|| |+|+|+ |+|++ |++||++|
T Consensus 6 ~~~~~~~~~~~~~~l~~~~~~P~n~e~p~~~l~~~~iTP~~~~yvr~h~~vP~i~d~~~w~L~V~-G~V~~-p~~ltl~d 83 (393)
T 1ogp_A 6 GPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVDHLQSYSVTLT-GLIQN-PRKLFIKD 83 (393)
T ss_dssp CCSSSTTCCCCCTTCEEEETTTTEEECCHHHHTSCSSCCGGGSCEECSSCCCEESCSTTCEEEEE-ESSSS-CCEEEHHH
T ss_pred CCCccccCCCCCCCceEcCCCCCCCCCChHHcccCCcCCcccceEecCCCCCccCCCCceEEEEE-eEcCC-CeEeeHHH
Confidence 57899999999999999999999999999999889999999999998 999999 99998 99999999
Q ss_pred HHHhccc-------eeccccC---------------------ccCccccHHHHHhCCCCC------------------C-
Q psy11686 178 EKLKLVK-------VMAGNIS---------------------QEDSKLAAKDIASDPYVM------------------E- 210 (939)
Q Consensus 178 l~~~~p~-------~C~gn~~---------------------~~~~~~~~~~vL~~~g~~------------------d- 210 (939)
|+ +||+ +|+||+| ..|+|++++|||++||+. |
T Consensus 84 L~-~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~a~W~GV~L~dlL~~aG~~~~a~~~~~~~~~V~f~g~D~ 162 (393)
T 1ogp_A 84 IR-SLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVSVDR 162 (393)
T ss_dssp HH-TSCEEEEEEEEECTTTTHHHHHHHSCCCSCCCCSCCEEEEEEEEEEHHHHHHTTTCCTTCSCCTTCCCEEEEEESCC
T ss_pred Hh-cCCCEEEEEEEEecCCccccccccccccCccccccceecceEEeeEHHHHHHhcCCCcccccccCcceEEEEEEcCc
Confidence 97 8999 9999865 367888899999999975 2
Q ss_pred -------CC--CcchhhhcCC-------CCCCCCCCCCC-CCCceEeeCC------cceeeeEEEeecCCCCcccccCCC
Q psy11686 211 -------PV--RSPLLKATSL-------KPYNAEPPPSM-LYSSLLRIPF------CSHTGKVILSDHESTSHWQQNDYK 267 (939)
Q Consensus 211 -------~~--~ipl~~a~~~-------~~mNGepLp~~-G~PlRlvvPg------vKWl~~I~~~~~~~~g~w~~~~Y~ 267 (939)
+| ||||++||++ |+|||||||++ |||||||||| ||||++|+|++++++||||++||+
T Consensus 163 ~~~~~~~~Y~~sipl~~al~~~~~vlLA~~mNGepL~~~hG~PlRLVvPg~~G~rsvKwL~~I~v~~~~~~~~w~~~~Y~ 242 (393)
T 1ogp_A 163 CKEENGGPYKASITLSQATNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKDYK 242 (393)
T ss_dssp CGGGTTCCCEEEEEHHHHHCGGGCCEEEEEETTEECCTTTTTTCEEECTTSCGGGSCCSEEEEEEESSCCCCHHHHSSSC
T ss_pred ccccCCCCeEEEeEHHHHhCCCCCEEEEeCcCCeECCcccCceEEEEeCccccceeeeeccEEEEEecCCCCcceecccc
Confidence 23 5999999974 99999999999 9999999999 999999999999999999999999
Q ss_pred ccCCCCCCCCccCCCCCCcccccceEEEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeeeCCCC
Q psy11686 268 GFSPSTDWDTVDFAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQD 347 (939)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l~~~~ 347 (939)
+++++++++.+.+.+..+|++|++||+|+.|.++++++. +.++|+||||+|||++|+|||||+|||+||+.|+|.++.
T Consensus 243 ~~p~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~--g~~~v~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~ 320 (393)
T 1ogp_A 243 MFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVKP--GKVSIKGYAVSGGGRGIERVDISLDGGKNWVEASRTQEP 320 (393)
T ss_dssp CCCTTCCTTTCCGGGSCCCCSCCCEEEECSSCSEEEECS--EEEEEEEEEECSTTCCEEEEEEESSTTSSCEECEEESSS
T ss_pred ccCCCCCcccccCCCCceeeeecccEEEeCCCCCCEecC--CcEEEEEEEEcCCCCCEEEEEEEcCCCCCceEeeccCcC
Confidence 999888776666666789999999999999999999974 679999999999889999999999999999999998743
Q ss_pred -CC----CCCCCceeEEEeEEEeecCC
Q psy11686 348 -SQ----APLTRHWGWTLWRATIPVDP 369 (939)
Q Consensus 348 -~~----~~~~~~~~W~~W~~~~~~~~ 369 (939)
.+ ..+.+.|||++|+++|++.+
T Consensus 321 ~~~~~~~~~~~~~~aW~~W~~~~~~~~ 347 (393)
T 1ogp_A 321 GKQYISEHSSSDKWAWVLFEATIDVSQ 347 (393)
T ss_dssp SSCCCSSSTTSCTTSCEEEEEEEEESS
T ss_pred ccccccccccCCCCEEEEEEEEEecCC
Confidence 11 11247899999999998744
No 4
>2bih_A Nitrate reductase [NADPH]; flavoprotein, nitrate assimilation, oxidoreductase; HET: MTV; 2.60A {Pichia angusta}
Probab=100.00 E-value=1.4e-58 Score=528.91 Aligned_cols=309 Identities=23% Similarity=0.372 Sum_probs=262.1
Q ss_pred CCcc-ccccccCCCCCCCCCCCccc-cccccCCCCceEee--------------EEEEEeecccCCcceeeeHHHHHHhc
Q psy11686 119 VRSP-LLKATSLKPYNAEPPPSMLV-ENFLTPSLLSQVGS--------------STITLDQAIVSKQLSSFKHSDEKLKL 182 (939)
Q Consensus 119 ~r~p-~l~v~~~~P~n~e~p~~~l~-~~~~TP~~~~~v~~--------------w~l~v~~G~v~~~p~~~t~~dl~~~~ 182 (939)
.|++ +|++++.+|||+|||++.|. .++|||+++||+|| |+|+|+ |+|++ |++||++||+++|
T Consensus 41 ~r~~~li~~~~~~P~n~E~p~~~L~~~~~iTP~~~~yvr~h~~vP~i~~~d~~~w~L~V~-G~V~~-p~~ltl~dL~~~l 118 (474)
T 2bih_A 41 ARDPDLLRLTGSHPFNSEPPLTKLYDSGFLTPVSLHFVRNHGPVPYVPDENILDWEVSIE-GMVET-PYKIKLSDIMEQF 118 (474)
T ss_dssp CCCTTSEESSTTSSCEEECCHHHHHHTCSSCCGGGSCEECSSCCCCCCTTTGGGCEEEEE-ESBSS-CEEEEHHHHHHHS
T ss_pred CCCcccEEecCCCCccCCCCHHHHhcccccCCCccEEEEecCCCCccccCCCCCeEEEEE-eecCC-ceEeeHHHHhhcC
Confidence 4554 66778899999999999996 48999999999995 999999 99998 9999999999449
Q ss_pred cc-------eeccccC---------------------ccCccccHHHHHhCCCCC-----------C-----CC--Ccch
Q psy11686 183 VK-------VMAGNIS---------------------QEDSKLAAKDIASDPYVM-----------E-----PV--RSPL 216 (939)
Q Consensus 183 p~-------~C~gn~~---------------------~~~~~~~~~~vL~~~g~~-----------d-----~~--~ipl 216 (939)
|+ +|+||+| ..|+|+++++||+.||+. | +| +|||
T Consensus 119 p~~~~~~~l~CvgN~r~e~~~v~~~~G~~W~~~avs~a~WtGV~L~dlL~~aG~~~~A~~V~f~g~D~~~~g~Y~~sipl 198 (474)
T 2bih_A 119 DIYSTPVTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKARPSKRARFVWMEGADNPANGAYGTCIRL 198 (474)
T ss_dssp CCEEEEEEEECTTTTHHHHHHHSCCSSCCCCSCCEEEEEEEEEEHHHHHHHTCBCTTCCEEEEEESCCCTTSSCEEEEEH
T ss_pred CCeEEEEEEEccCCccccccccccccccccccCceeeeEEEeEEHHHHHHhcCCCCCceEEEEEecCCCCCCCeEEEEEH
Confidence 99 9999964 467899999999999975 3 23 5999
Q ss_pred hhhcCC-------CCCCCCCCCCC-CCCceEeeCC------cceeeeEEEeecCCCCcccccCCCccCCCCCCCC-----
Q psy11686 217 LKATSL-------KPYNAEPPPSM-LYSSLLRIPF------CSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDT----- 277 (939)
Q Consensus 217 ~~a~~~-------~~mNGepLp~~-G~PlRlvvPg------vKWl~~I~~~~~~~~g~w~~~~Y~~~~~~~~~~~----- 277 (939)
++||++ |+|||||||++ |||||||||| ||||++|+|++++++||||.+||+++++.+.++.
T Consensus 199 ~~ald~~~dvlLA~~mNGepLp~~hG~PlRLVvPg~~G~rsvKWL~~Iev~~~~~~g~~~~~~yrv~p~~~~~~~~~~~~ 278 (474)
T 2bih_A 199 SWCMDPERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYFDNRVLPTMVTPEMAKSDD 278 (474)
T ss_dssp HHHTCTTTCCEEEEEETTEECCGGGTTTCEEECTTBBGGGSCSSEEEEEEESSCCCCHHHHHSSBCCCTTCCHHHHHTCG
T ss_pred HHHhCcCCCEEEEEeeCCeECCccCCCeeEEEecccccCCccccCCEEEEEeccCCCceeeecccccCCCCCcccccccc
Confidence 999984 99999999999 9999999999 9999999999999999999999999987765432
Q ss_pred ccC-CCCCCcccccceEEEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeeeCCCCCCCC-----
Q psy11686 278 VDF-AKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAP----- 351 (939)
Q Consensus 278 ~~~-~~~~~i~~~~v~S~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l~~~~~~~~----- 351 (939)
..| ++..+|++|+|||+||.|.++++|++.+++++|+||||||||++|+|||||+|||+||+.|+|..++.+..
T Consensus 279 ~~W~~~~~~i~~~~vnS~I~~P~~~e~v~~~~g~~~v~GyA~sGGGr~I~RVEVS~DgG~TW~~A~L~~pe~~~r~~~~~ 358 (474)
T 2bih_A 279 RWWKDERYAIYDLNLQTIICKPENQQVIKISEDEYEIAGFGYNGGGVRIGRIEVSLDKGKSWKLADIDYPEDRYREAGYF 358 (474)
T ss_dssp GGGSCGGGBCCBCCCEEEEEESCTTCEEECCSCEEEEEEEEECSTTCCEEEEEEESSSSSSCEECEEECTHHHHHHTCCE
T ss_pred CccccCcceeeccccceEEecCCCCCEeecCCCeEEEEEEEEcCCCCCEEEEEEEcCCCCCceECcccCccccccccccc
Confidence 123 34568999999999999999999976457999999999998999999999999999999999987642110
Q ss_pred --C---------CCceeEEEeEEEeecCC--CCceeeeeecccCCCCCCcccccccChHHHhhcccHHHHhhccccCcce
Q psy11686 352 --L---------TRHWGWTLWRATIPVDP--KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKH 418 (939)
Q Consensus 352 --~---------~~~~~W~~W~~~~~~~~--~~~~vra~d~~~~~~p~~~d~~~~~~~~~l~~~f~~~~l~~~p~~~~~~ 418 (939)
+ ...|+|++|+++|++++ +.
T Consensus 359 ~~~g~~~~~~~~~~~~~W~~W~~~~~~~~~~g~----------------------------------------------- 391 (474)
T 2bih_A 359 RLFGGLVNVCDRMSCLCWCFWKLKVPLSELARS----------------------------------------------- 391 (474)
T ss_dssp EETTEEECGGGCCCCCSCEEEEEEEEHHHHHTC-----------------------------------------------
T ss_pred cccccccccccccccceeeeeEEEEecccCCCc-----------------------------------------------
Confidence 1 25799999999998642 11
Q ss_pred eeccCCCCCCCccccCCCCCCCcccceeeeeeeccccHHHHHHHcCCCCCCCcCCCCCceeeEEeeeeecccCCCCCCCC
Q psy11686 419 GTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVEIWSKAVDSSYNTQPES 498 (939)
Q Consensus 419 ~l~Cagn~r~~~~~~~~~~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~~~~~~~g~d~~~~~~~~~~~a~d~~~Ng~pl~ 498 (939)
..+++||+|..||.||..
T Consensus 392 --------------------------------------------------------------~~I~vRA~D~sgn~QP~~ 409 (474)
T 2bih_A 392 --------------------------------------------------------------KDILIRGMDERMMVQPRT 409 (474)
T ss_dssp --------------------------------------------------------------SEEEEEEEETTCCBCCSS
T ss_pred --------------------------------------------------------------eEEEEEEEcCCCCcCCCC
Confidence 234589999999999986
Q ss_pred CCCCCCcceeecceeeEEEEEEecCCcCceeecCCCCCCCCCCc
Q psy11686 499 FANIWNLRGVLSNAYHRVRVEIWSKAVDSSYNTQPENGHPSGYQ 542 (939)
Q Consensus 499 ~~~g~p~R~vvp~~~~~~~i~~~~~~~~~~y~~~~~~~~~~~~~ 542 (939)
+ -||+|+++.|.|++++|++........+.+.|+ .+++||
T Consensus 410 ~--~WN~~G~~nN~~~rV~v~~~~~~~~f~hp~~~~--~~ggwm 449 (474)
T 2bih_A 410 M--YWNVTSMLNNWWYRVAIIREGESLRFEHPVVAN--KPGGWM 449 (474)
T ss_dssp C--CCCTTCCSCCSCEEEEEEEETTEEEEECSCCSS--SCCSHH
T ss_pred c--cccccccccCcEEEEEEEecCCEEEEeCCCCCC--CCCcCc
Confidence 4 699999999999999999865544666667777 456776
No 5
>2bii_A Nitrate reductase [NADPH]; FAD, flavoprotein, heme, molybdenum, nitrate assimilation, oxidoreductase; HET: MTV; 1.70A {Pichia angusta}
Probab=100.00 E-value=1.8e-58 Score=523.77 Aligned_cols=300 Identities=22% Similarity=0.355 Sum_probs=253.7
Q ss_pred cCCCCCCCCCCCccc-cccccCCCCceEee--------------EEEEEeecccCCcceeeeHHHHHHhccc-------e
Q psy11686 128 SLKPYNAEPPPSMLV-ENFLTPSLLSQVGS--------------STITLDQAIVSKQLSSFKHSDEKLKLVK-------V 185 (939)
Q Consensus 128 ~~~P~n~e~p~~~l~-~~~~TP~~~~~v~~--------------w~l~v~~G~v~~~p~~~t~~dl~~~~p~-------~ 185 (939)
+.+|||+|||++.|. +++|||+++||+|| |+|+|+ |+|++ |++||++||+++||+ +
T Consensus 1 g~~P~N~E~P~~~L~~~~~iTP~~~~yvr~h~~vP~i~~~d~~~w~L~V~-G~V~~-p~~ltl~dL~~~lp~~~~~~~l~ 78 (424)
T 2bii_A 1 GSHPFNSEPPLTKLYDSGFLTPVSLHFVRNHGPVPYVPDENILDWEVSIE-GMVET-PYKIKLSDIMEQFDIYSTPVTMV 78 (424)
T ss_dssp ---CEEECCCHHHHHHTCSSCCGGGSCEEESSCCCCCCGGGGGGCEEEEE-ESBSS-CEEEEHHHHHHHSCCEEEEEEEE
T ss_pred CCCCccCCCCHHHHhhCCccCCchheEEecCCCCCccCcCCCCCeEEEEE-eecCC-ceEeeHHHHhccCCCeEEEEEEE
Confidence 368999999999996 48999999999998 999999 99998 999999999944999 9
Q ss_pred eccccC---------------------ccCccccHHHHHhCCCCC-----------C-----CC--CcchhhhcCC----
Q psy11686 186 MAGNIS---------------------QEDSKLAAKDIASDPYVM-----------E-----PV--RSPLLKATSL---- 222 (939)
Q Consensus 186 C~gn~~---------------------~~~~~~~~~~vL~~~g~~-----------d-----~~--~ipl~~a~~~---- 222 (939)
|+||+| ..|+|++++|||+.||+. | +| +|||++|+++
T Consensus 79 C~gN~r~~~~~~~~~~G~~W~~~ai~~a~WtGV~L~dlL~~ag~~~~a~~V~f~~~D~~~~g~Y~~sipl~~a~d~~~dv 158 (424)
T 2bii_A 79 CAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKARPSKRARFVWMEGADNPANGAYGTCIRLSWCMDPERCI 158 (424)
T ss_dssp CTTTTHHHHHHHSCCSSCCCCSCCEEEEEEEEEEHHHHHHHHCBCTTCCEEEEEESCCCTTSSCEEEEEHHHHTCTTTCC
T ss_pred ecCCccccccccccccccccccCceEeeEEEeeEHHHHHHhcCCCCCceEEEEEecCCCCCCCEEEEEEHHHHhCCCCCE
Confidence 999964 467899999999999975 3 23 5999999984
Q ss_pred ---CCCCCCCCCCC-CCCceEeeCC------cceeeeEEEeecCCCCcccccCCCccCCCCCCCC-----ccC-CCCCCc
Q psy11686 223 ---KPYNAEPPPSM-LYSSLLRIPF------CSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDT-----VDF-AKSPAI 286 (939)
Q Consensus 223 ---~~mNGepLp~~-G~PlRlvvPg------vKWl~~I~~~~~~~~g~w~~~~Y~~~~~~~~~~~-----~~~-~~~~~i 286 (939)
|+|||||||++ |||||||||| ||||++|+|++++++||||.++|+++++.+.++. ..| ++..+|
T Consensus 159 lLA~~mNGepL~~~hG~PlRLVvPg~~G~rsvKwl~~I~v~~~~~~g~~~~~~yrv~p~~~~~~~~~~~~~~w~~~~~~i 238 (424)
T 2bii_A 159 MIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYFDNRVLPTMVTPEMAKSDDRWWKDERYAI 238 (424)
T ss_dssp EEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCCHHHHSSSBCCCTTCCHHHHHHCGGGGSCGGGBC
T ss_pred EEEEeeCCcCCCcccCCceEEEecccccCCccccCcEEEEEeccCCCceeeecccccCCCCCccccccccCccccCccee
Confidence 99999999999 9999999999 9999999999999999999999999987765432 122 345689
Q ss_pred ccccceEEEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeeeCCCCCCCC-------C-------
Q psy11686 287 QELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAP-------L------- 352 (939)
Q Consensus 287 ~~~~v~S~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l~~~~~~~~-------~------- 352 (939)
++|+|||+||.|.++++|++.+++++|+||||||||++|+|||||+|||+||+.|+|..++.+.. +
T Consensus 239 ~~l~v~S~I~~P~~~~~v~~~~g~~~v~GyA~sGGGr~I~rVEVS~DgG~tW~~A~L~~pe~~~~~~~~~~~~g~~~~~~ 318 (424)
T 2bii_A 239 YDLNLQTIICKPENQQVIKISEDEYEIAGFGYNGGGVRIGRIEVSLDKGKSWKLADIDYPEDRYREAGYFRLFGGLVNVC 318 (424)
T ss_dssp CBCCCEEEEEESCTTCEEECCSCEEEEEEEEECSTTCCEEEEEEESSTTSSCEECEEECTHHHHHHTCSEEETTEEECGG
T ss_pred cccccceEEecCCCCCEeecCCCeEEEEEEEEcCCCCCEEEEEEEcCCCCCceEeEccCcCCcccccccccccccccccc
Confidence 99999999999999999976457999999999998999999999999999999999997643210 1
Q ss_pred --CCceeEEEeEEEeecCC--CCceeeeeecccCCCCCCcccccccChHHHhhcccHHHHhhccccCcceeeccCCCCCC
Q psy11686 353 --TRHWGWTLWRATIPVDP--KTKEVSIMDMLMGKKPHDIDFATNATPDQMKAMFAEEKVRTFNEKGEKHGTVCARMNDK 428 (939)
Q Consensus 353 --~~~~~W~~W~~~~~~~~--~~~~vra~d~~~~~~p~~~d~~~~~~~~~l~~~f~~~~l~~~p~~~~~~~l~Cagn~r~ 428 (939)
...|+|++|+++|++++ +.
T Consensus 319 ~~~~~~~W~~W~~~~~~~~~~g~--------------------------------------------------------- 341 (424)
T 2bii_A 319 DRMSCLCWCFWKLKVPLSELARS--------------------------------------------------------- 341 (424)
T ss_dssp GCCCCCSCEEEEEEEEHHHHHTC---------------------------------------------------------
T ss_pred cccccceeeeeEEEEecccCCCc---------------------------------------------------------
Confidence 25799999999998642 11
Q ss_pred CccccCCCCCCCcccceeeeeeeccccHHHHHHHcCCCCCCCcCCCCCceeeEEeeeeecccCCCCCCCCCCCCCCccee
Q psy11686 429 ENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSLDSADVQHVHVEIWSKAVDSSYNTQPESFANIWNLRGV 508 (939)
Q Consensus 429 ~~~~~~~~~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~~~~~~~g~d~~~~~~~~~~~a~d~~~Ng~pl~~~~g~p~R~v 508 (939)
..+++||+|..||.||..+ -||+|++
T Consensus 342 ----------------------------------------------------~~I~vRA~D~~gn~QP~~~--~WN~~G~ 367 (424)
T 2bii_A 342 ----------------------------------------------------KDILIRGMDERMMVQPRTM--YWNVTSM 367 (424)
T ss_dssp ----------------------------------------------------SEEEEEEEETTCCBCCSSC--CCCTTCC
T ss_pred ----------------------------------------------------eEEEEEEEcCCCCcCCCCc--ccccccc
Confidence 2345899999999999864 6999999
Q ss_pred ecceeeEEEEEEecCCcCceeecCCCCCCCCCCc
Q psy11686 509 LSNAYHRVRVEIWSKAVDSSYNTQPENGHPSGYQ 542 (939)
Q Consensus 509 vp~~~~~~~i~~~~~~~~~~y~~~~~~~~~~~~~ 542 (939)
+.|.|++++|++........+.+.|+ .+.+||
T Consensus 368 ~nN~~~rv~v~~~~~~~~f~hp~~~~--~~~gwm 399 (424)
T 2bii_A 368 LNNWWYRVAIIREGESLRFEHPVVAN--KPGGWM 399 (424)
T ss_dssp SCCSCEEEEEEEETTEEEEECSCBTT--BCCSHH
T ss_pred ccCcEEEEEEEecCCEEEEeCCCCCC--CCCcCc
Confidence 99999999999866644666677777 456776
No 6
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=100.00 E-value=1.2e-56 Score=503.55 Aligned_cols=245 Identities=22% Similarity=0.282 Sum_probs=209.3
Q ss_pred CCccCCCCccccccccCCCCCCCCCCCccccccccCCCCceEee-------------EEEEEeecccCCcceeeeHHHHH
Q psy11686 113 PYVMEPVRSPLLKATSLKPYNAEPPPSMLVENFLTPSLLSQVGS-------------STITLDQAIVSKQLSSFKHSDEK 179 (939)
Q Consensus 113 ~~~~dP~r~p~l~v~~~~P~n~e~p~~~l~~~~~TP~~~~~v~~-------------w~l~v~~G~v~~~p~~~t~~dl~ 179 (939)
++...|.. +.|+..+.+|||+|||++.|.+++|||+++||+|| |+|+|+ |+|++ |++||++||+
T Consensus 14 ~~~~~p~~-~~li~~~~~p~n~e~p~~~l~~~~iTP~~~~yvr~h~~~vP~~id~~~w~L~V~-G~V~~-p~~ltl~dL~ 90 (373)
T 2blf_A 14 PLVMYPGK-RPLIGLTARPPQLETPFSVFDEGLITPNDAFFVRYHLAGIPLEIDPDAFRLEIK-GKVGT-PLSLSLQDLK 90 (373)
T ss_dssp EEECCTTC-CCEEEEETTTTEEECCGGGGGSCSSCCGGGCCBCCSCSBCCCEECTTTCCEEEE-ESBSS-CEEECHHHHH
T ss_pred ccccCCCC-CCcEEecCCCCcCCCChHHhCccccCChhheEEEecCCCCccccCCCCeEEEEE-eEcCC-ceEEeHHHHh
Confidence 45556664 44555569999999999999888999999999996 999999 99998 9999999999
Q ss_pred Hhccc-------eeccccC-------------------ccCccccHHHHHhCCCCC-----------CC--------C--
Q psy11686 180 LKLVK-------VMAGNIS-------------------QEDSKLAAKDIASDPYVM-----------EP--------V-- 212 (939)
Q Consensus 180 ~~~p~-------~C~gn~~-------------------~~~~~~~~~~vL~~~g~~-----------d~--------~-- 212 (939)
++||+ +|+||+| ..|+|++++|||+.||++ |. |
T Consensus 91 ~~lp~~~~~~~l~C~~N~R~~~~~~~~G~~W~~gai~~~~W~GV~L~dlL~~ag~~~~a~~V~~~~~D~~~~~~~~~Y~~ 170 (373)
T 2blf_A 91 NDFPASEVVAVNQCSGNSRGFVEPRVGGGQLANGAMGNARWRGVPLKAVLEKAGVQAGAKQVTFGGLDGPVIPETPDFVK 170 (373)
T ss_dssp HHSCCEEEEEEEECTTTTGGGCSSCCSSCCCCSCSEEEEEEEEEEHHHHHHHHCBCTTCCEEEEEESCBCSSTTSCCCEE
T ss_pred ccCCCeEEEEEEEeccCccccccccccCCCccccceeeeEEEEEEHHHHHHhcCCCCCCcEEEEEecCCCCCCCCCCEEE
Confidence 44999 9999864 356788899999999975 22 4
Q ss_pred CcchhhhcCC-----CCCCCCCCCCC-CCCceEeeCC------cceeeeEEEeecCCCCcccccCCCccCCCCCCCCcc-
Q psy11686 213 RSPLLKATSL-----KPYNAEPPPSM-LYSSLLRIPF------CSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDTVD- 279 (939)
Q Consensus 213 ~ipl~~a~~~-----~~mNGepLp~~-G~PlRlvvPg------vKWl~~I~~~~~~~~g~w~~~~Y~~~~~~~~~~~~~- 279 (939)
||||++|+++ |+|||||||++ |||||||||| ||||++|+|++++++||||++||++..........+
T Consensus 171 sipl~~a~~~~~lLA~~mNGepL~~~hG~PlRlVvPg~~G~~svKwl~~I~v~~~~~~~~w~~~~Y~~p~~~~~~~~~~~ 250 (373)
T 2blf_A 171 ALSIDHATDGEVMLAYSMNGADLPWLNGYPLRLVVPGYYGTYWVKHLNEITVIDKEFDGFWMKTAYRIPDNACACTEPGK 250 (373)
T ss_dssp EEEHHHHTSSCSEEEEEETTEECCGGGTTTCEEECTTBCGGGSCBSEEEEEEESSCCCCHHHHTSSEEESSTTCCCSTTC
T ss_pred EEEHHHhcCCCEEEEEeeCCeECCcccCCceEEEecCccccccceeccEEEEEecCCCCcceecccccCCccccccCCCC
Confidence 5999999996 99999999999 9999999999 999999999999999999999999843211111112
Q ss_pred -CCCCCCcccccceEEEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeeeCCCCCCCCCCCceeE
Q psy11686 280 -FAKSPAIQELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGW 358 (939)
Q Consensus 280 -~~~~~~i~~~~v~S~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l~~~~~~~~~~~~~~W 358 (939)
+.+..+|++|++||+|+.|.++++++. |+++|+||||+| |++|+|||||+|||+||+.|+|.++. ++|||
T Consensus 251 ~~~~~~~i~~~~v~S~I~~P~~~~~v~~--g~~~v~G~A~~G-g~~I~rVEVS~DgG~tW~~A~l~~~~------~~~~W 321 (373)
T 2blf_A 251 APTATIPINRFDVRSFITNVENGASVKA--GEVPLRGIAFDG-GYGITQVSVSADAGKSWTNATLDPGL------GKYSF 321 (373)
T ss_dssp CCSSEEECCBCCCEEEECSCCTTEEECS--EEEEEEEEEECS-SSCEEEEEEESSTTSSCEECEECCCS------CTTSC
T ss_pred cccccccceecccCEEEEecCCCCEecc--ceEEEEEEEEcC-CCCEEEEEEEeCCCCCceEeEeCCCC------CCCeE
Confidence 345578999999999999999999984 699999999965 77899999999999999999999654 57999
Q ss_pred EEeEEEeecCC
Q psy11686 359 TLWRATIPVDP 369 (939)
Q Consensus 359 ~~W~~~~~~~~ 369 (939)
++|+++|+..+
T Consensus 322 ~~W~~~~~~~~ 332 (373)
T 2blf_A 322 RGWKAVLPLTK 332 (373)
T ss_dssp EEEEEEEEECS
T ss_pred EEEEEEEEcCC
Confidence 99999997643
No 7
>2xts_A Sulfite dehydrogenase; oxidoreductase-electron transport complex, SOX system, sulfa oxidation, molybdenum cofactor, heme, electron transfer; HET: MTE HEC; 1.33A {Paracoccus pantotrophus}
Probab=100.00 E-value=5.2e-50 Score=450.64 Aligned_cols=258 Identities=20% Similarity=0.196 Sum_probs=221.5
Q ss_pred CCccCCCCcccccccc-CCCCCCCCCCCccccccccCCCCceEee-----------EEEEEeecccCCcceeeeHHHHHH
Q psy11686 113 PYVMEPVRSPLLKATS-LKPYNAEPPPSMLVENFLTPSLLSQVGS-----------STITLDQAIVSKQLSSFKHSDEKL 180 (939)
Q Consensus 113 ~~~~dP~r~p~l~v~~-~~P~n~e~p~~~l~~~~~TP~~~~~v~~-----------w~l~v~~G~v~~~p~~~t~~dl~~ 180 (939)
++.....|........ ..+.++|+|+..| .++|||+++||+|| |+|+|+ |+|++ |++||++||+
T Consensus 32 ~~~~~~~r~~~~~~~~~~~~~~~~~p~~~l-~~~iTP~~~~y~r~h~~vP~id~~~w~L~V~-G~V~~-p~~ltl~dL~- 107 (390)
T 2xts_A 32 HFESHVKRQYVEWLTESPVSSINFTPIHAL-EGTITPQGCAFERHHSGAIELSKQDYRLMIN-GLVEK-PLVFTFEDLL- 107 (390)
T ss_dssp GGGTTSSCBCCGGGCSBTTBEECBCCTTTC-CSSCCCGGGSCCEESSCBCCCCTTTCCEEEE-ESBSS-CEEECHHHHT-
T ss_pred cccccceeeccCccccccccccccCChhhc-cCCcCCCCceEEecCCCCCccCCCCeEEEEE-eEcCC-CeEEcHHHHh-
Confidence 3444444544322222 6778889999999 58999999999999 999999 99998 9999999999
Q ss_pred hccc-------eeccccC--------------------ccCccccHHHHHhCCCCC-----------CC----CCcchhh
Q psy11686 181 KLVK-------VMAGNIS--------------------QEDSKLAAKDIASDPYVM-----------EP----VRSPLLK 218 (939)
Q Consensus 181 ~~p~-------~C~gn~~--------------------~~~~~~~~~~vL~~~g~~-----------d~----~~ipl~~ 218 (939)
+||+ +|+||++ ..|+|++++|||+.||++ |+ .+|||++
T Consensus 108 ~lp~~~~~~~l~C~gn~r~~w~~~~~~g~~w~~g~i~~~~W~GV~L~dlL~~ag~~~~a~~V~~~~~Dg~~y~~sipl~~ 187 (390)
T 2xts_A 108 RFPRTTTTAFCECAANGGMEWGGAQLEGCQYTQGMIHNMEYVGVPLSVLLAEAGVKPEGKWLYAEGADASSNGRSFPMEK 187 (390)
T ss_dssp TSCCEEEEEEEECTTTTGGGTTSCCCSSHHHHHCSEEEEEEEEEEHHHHHHHHCBCTTCCEEEEEESSTTCCCEEEEHHH
T ss_pred cCCCEEEEEEEEecCCcccccccccccccccccCceeeeEEEEEEHHHHHHhcCCCCCceEEEEEecCCCeEEEEEEHHH
Confidence 8999 9999976 456788899999999975 23 3599999
Q ss_pred hcCC----CCCCCCCCCCC-CCCceEeeCC------cceeeeEEEeecCCCCcccccCCCccCCCCCCCCccCCCCCCcc
Q psy11686 219 ATSL----KPYNAEPPPSM-LYSSLLRIPF------CSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQ 287 (939)
Q Consensus 219 a~~~----~~mNGepLp~~-G~PlRlvvPg------vKWl~~I~~~~~~~~g~w~~~~Y~~~~~~~~~~~~~~~~~~~i~ 287 (939)
||++ |+|||||||++ |||||||||| ||||++|+|+++++++|||+.+|+.+.+.... ..+++
T Consensus 188 a~~~~lLA~~mNGepL~~~hG~PlRLVvPg~~G~~svKwl~~I~v~~~~~~~~~~~~~y~~~~~~~~~-------~~~~~ 260 (390)
T 2xts_A 188 VMDDVMLAFFANGEALRKEHGYPARLVVPGWEGNMWVKWVRRLGIYDKAVESREETSKYTDLMPDGRA-------RKWTW 260 (390)
T ss_dssp HHHHCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCBSEEEEEEESSCCCCGGGTTSSCEECTTSCE-------EECCC
T ss_pred HhcCcEEEEeECCeECCccCCCceEEEecCccCcccceeccEEEEEecCCCCchhhccccccCCCCCc-------cccce
Confidence 9976 99999999999 9999999999 99999999999999999999999987654321 23578
Q ss_pred cccceEEEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeeeCCCCCCCCCCCceeEEEeEEEeec
Q psy11686 288 ELPVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPV 367 (939)
Q Consensus 288 ~~~v~S~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l~~~~~~~~~~~~~~W~~W~~~~~~ 367 (939)
+|+|||+|+.|.+++.|+.+.+.++|+||||+|+| +|+|||||+|||+||+.|+|.++. .+++|++|++.|..
T Consensus 261 ~~~vnS~I~~P~~~~~i~~~~g~~~v~G~A~~G~g-~I~rVevS~DgG~tW~~A~L~~~~------~~~aw~~w~~~~~~ 333 (390)
T 2xts_A 261 VMDAKSVITSPSPQVPIRHGKGPLVISGLAWSGNG-RITRVDVSLDGGKNWTTARITGQA------LPKALTRFHLDIDW 333 (390)
T ss_dssp BCCCEEEEEESBTTBCCCSCSEEEEEEEEEECTTS-CEEEEEEESBTTSSCEECEEESCC------CTTSCEEEEEEEEE
T ss_pred eecCceeeecCCCCCEeecCCCcEEEEEEEEcCCC-cEEEEEEecCCCCcEEEeeccCCC------CCCceEEEEEEEEc
Confidence 99999999999999998643478999999999977 599999999999999999999876 45899999999988
Q ss_pred CCCCce--eeeeecccCCCCCCc
Q psy11686 368 DPKTKE--VSIMDMLMGKKPHDI 388 (939)
Q Consensus 368 ~~~~~~--vra~d~~~~~~p~~~ 388 (939)
..+.++ |||+|..+++||.+.
T Consensus 334 ~~g~~~i~vRA~D~~gn~QP~~~ 356 (390)
T 2xts_A 334 DGSEMLLQSRAVDETGYVQPTKD 356 (390)
T ss_dssp CSCCEEEEEEEEETTCCBCCCHH
T ss_pred CCCccEEEEEEEcCCCCcCCCcc
Confidence 766654 999999999999753
No 8
>3h38_A TRNA nucleotidyl transferase-related protein; transferase/RNA, nucleotide-binding, RNA-binding; 2.37A {Thermotoga maritima} PDB: 3h37_A 3h39_A* 3h3a_A*
Probab=100.00 E-value=3.4e-37 Score=353.67 Aligned_cols=250 Identities=19% Similarity=0.140 Sum_probs=193.5
Q ss_pred ccccccccee-ecCCCCCCccccCCCCCcccccCCCcccccchhHHHHHHHHHHhhCeE-EeecccCeEEE--------E
Q psy11686 543 PRATLQGARL-LTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQ-LRIAGEGTVTA--------K 612 (939)
Q Consensus 543 ~i~~m~V~Sl-I~~P~~D~dI~t~a~~~~~~~~~~~df~~~~~~~~~~l~~~~~~~g~~-~~~~~~g~~~~--------~ 612 (939)
-++++.||++ +++|+.|+||++++.++ ++.+.+. ..+|.. +.+..|||+++ +
T Consensus 38 ylVGG~VRD~LLg~~~~D~Di~t~~~~~----------------~~~~~~~--~~~~~~~~~g~~~gt~~v~~~~g~~~e 99 (441)
T 3h38_A 38 YVVGGFVRDLLLGIKNLDIDIVVEGNAL----------------EFAEYAK--RFLPGKLVKHDKFMTASLFLKGGLRID 99 (441)
T ss_dssp EEETHHHHHHHHTCCCCCEEEEESSCHH----------------HHHHHHH--TTSCEEEECCSSTTEEEEEETTSCEEE
T ss_pred EEEcHHHHHHHCCCCCCCeeEEeCCCHH----------------HHHHHHH--HHcCCEeccCCcCcEEEEEEeCCeEEE
Confidence 4678889997 79999999999998887 3322222 123433 45778888754 5
Q ss_pred EEeeccCCCC---------CCCccCCCcccchhHhhhcccCCCCCCCeEEeCcCcHHHHhcCcccccCCccccchhchhh
Q psy11686 613 VLSYRNRREK---------EDRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683 (939)
Q Consensus 613 v~tfr~~~~~---------~~~~~~Dl~rRDfTINA~a~~~~~~~~g~liD~~gG~~DL~~~~iR~v~~~~~~f~EDPlR 683 (939)
|+|||.+... .+++++||.||||||||||++++...+|+|+|||||++||++|+||+++++ +|.|||+|
T Consensus 100 v~t~R~e~~~~~~~~p~V~~~~l~eDl~RRDFTINAla~~~~~~~~g~liD~~gG~~DL~~~~iR~v~~~--~F~eDplR 177 (441)
T 3h38_A 100 IATARLEYYESPAKLPDVEMSTIKKDLYRRDFTINAMAIKLNPKDFGLLIDFFGGYRDLKEGVIRVLHTL--SFVDDPTR 177 (441)
T ss_dssp EEECCEECCSSSSSCCEESCCCHHHHHHTSSBGGGSCEEECSGGGTTEEECSSSHHHHHHTTEECBSSTT--HHHHCTTH
T ss_pred EecccccccCCCCCCCccCCCCHHHHHHhccchhhhhhcccCCCCCCeEeCCCCCHHHHhCCEEEECCCC--ChhhCHHH
Confidence 8899975321 258999999999999999999855456999999999999999999999986 89999999
Q ss_pred HHHHHHHHHHhCCCCCCChHHHHHHHHHhh--hhhcCCCHHHHHHHHHHHHcCCChHHHHHHHHHhcCc--ccccccchh
Q psy11686 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNL--DGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL--LFSKLKATT 759 (939)
Q Consensus 684 ilRa~RFaarlgf~~~~i~~~t~~ai~~~~--~~l~~vs~eRi~~El~kil~~~~~~~~~~~l~~~~~l--lfp~l~~~~ 759 (939)
||||+||++||||. |+++|.++|++++ ..|.++|+|||+.||.|||.++++...+..|.+.+++ +||++....
T Consensus 178 iLRa~Rfaa~lgf~---i~~~t~~~i~~~~~~~~l~~is~eRi~~El~kll~~~~~~~~l~~l~~~glL~~i~Pel~~~~ 254 (441)
T 3h38_A 178 ILRAIRFEQRFDFR---IEETTERLLKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRMAQFDVIKHLFPKTYYTP 254 (441)
T ss_dssp HHHHHHHHHHTTCE---ECHHHHHHHHHHHHTTHHHHSCHHHHHHHHHHHHTSSCHHHHHHHHHHTTHHHHHSTTCCCCH
T ss_pred HHHHHHHHHHhCCC---CChHHHHHHHHHHhhchhccCCHHHHHHHHHHHHcCCCHHHHHHHHHHcCChHHhCcccccch
Confidence 99999999999997 9999999999986 5899999999999999999999887777666655554 799998654
Q ss_pred h-H---HHHHHHHHHHhhhhhhhcccceeec----cCCCChhHHHHHHHHHhCCCCCchhhHHHHhh
Q psy11686 760 M-R---EYIVELMKYKEKSELIKDFHKWRLP----TFPMNGNIIRQFFARICNNPNNHKEEVLSAIK 818 (939)
Q Consensus 760 ~-~---~~~~~l~~~~~~~~~~~~~~~w~~~----~~~l~~~~l~~f~~RL~l~~~~~r~~ll~ai~ 818 (939)
. . ..+...+.|...... +...|.++ +..++.+...+++.||.++. ...+.+.....
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~l~~L~~~~~~~~~~~~~~rl~ls~-~~~~~l~~l~~ 318 (441)
T 3h38_A 255 SMDEKMENLFRNIPWVEENFG--EVDRFYAVLHVFLEFYDDESWKEVRDRYSLRR-NLINEIRHVEK 318 (441)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHTTTCCHHHHHHHHHHTTCCT-THHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhcc--chhhHHHHHHHHhCCCCHHHHHHHHHHcCCCH-HHHHHHHHHHH
Confidence 2 2 233444555543322 14567655 45567788999999999999 66666654433
No 9
>1ou5_A TRNA CCA-adding enzyme, tRNA-nucleotidyltransferase; polymerase, translation; 3.40A {Homo sapiens} SCOP: a.173.1.1 d.218.1.4
Probab=100.00 E-value=6e-35 Score=336.84 Aligned_cols=242 Identities=30% Similarity=0.389 Sum_probs=185.3
Q ss_pred ccccccccee-ecCCCCCCccccCCCCCcccccCCCcccccchhHHHHHHHHHHhhCeEE---eecccCeEEE-------
Q psy11686 543 PRATLQGARL-LTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQL---RIAGEGTVTA------- 611 (939)
Q Consensus 543 ~i~~m~V~Sl-I~~P~~D~dI~t~a~~~~~~~~~~~df~~~~~~~~~~l~~~~~~~g~~~---~~~~~g~~~~------- 611 (939)
-++++.||++ |++++.|+|+++++.|+ ++.++| ...|++. .+..||++++
T Consensus 74 ylVGG~VRD~LLg~~~~D~Di~~~~~p~----------------~~~~~~---~~~g~~~~~~~g~~~gt~~v~~~~~~~ 134 (448)
T 1ou5_A 74 RIAGGAVRDLLNGVKPQDIDFATTATPT----------------QMKEMF---QSAGIRMINNRGEKHGTITARLHEENF 134 (448)
T ss_dssp EEESTTTHHHHHTSCCSSCEEEESSCHH----------------HHHHHH---TTTTCCBCCCCCTTCCCEEECTTTTCE
T ss_pred EEeCHHHHHHHcCCCCCCEEEEeCCCHH----------------HHHHHH---HHcCCccccCcCcccceEEEEECCEEE
Confidence 4677889987 79999999999998888 555544 4445442 4677888764
Q ss_pred EEEeeccCCC---------CCCCccCCCcccchhHhhhcccCCCCCCCeEEeCcCcHHHHhcCcccccCCccccchhchh
Q psy11686 612 KVLSYRNRRE---------KEDRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYL 682 (939)
Q Consensus 612 ~v~tfr~~~~---------~~~~~~~Dl~rRDfTINA~a~~~~~~~~g~liD~~gG~~DL~~~~iR~v~~~~~~f~EDPl 682 (939)
+|+|||.+.. +.+++++||.||||||||||+++ +|+|+|||||++||++|+||+|++|.++|.|||+
T Consensus 135 ev~t~R~~~~~~~r~~~v~~~~~l~eDl~RRDFTINAla~~~----~g~l~D~~gG~~DL~~~~IR~v~d~~~rF~EDPL 210 (448)
T 1ou5_A 135 EITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGF----DGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYL 210 (448)
T ss_dssp EEEECCS------------SSCCSSCCGGGSSBGGGSCEECS----SCBEECSSSHHHHTTTTCCCBSSTTTTTSSSCTT
T ss_pred EEEeecccccccCCCCccccCccHHHHHHHcCCChhheeECC----CCCEeCCCCCHHHHhCCeEEecCChHHhhhhCHH
Confidence 6999997532 23479999999999999999996 7999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHh--CC-CCCCChHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHcCCChHHHHHHHHHhcCc--c-ccccc
Q psy11686 683 RILRYFRFFARI--CN-NPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL--L-FSKLK 756 (939)
Q Consensus 683 RilRa~RFaarl--gf-~~~~i~~~t~~ai~~~~~~l~~vs~eRi~~El~kil~~~~~~~~~~~l~~~~~l--l-fp~l~ 756 (939)
|||||+||++|| || . |+++|+++|++++..|..+|.|||+.||.|||.++++...+..|.+.+++ + ||++.
T Consensus 211 RiLRa~RFaarl~~gf~~---I~~~T~~ai~~~~~~L~~is~ERi~~El~kiL~~~~~~~~l~~L~~~GlL~~i~lPe~~ 287 (448)
T 1ou5_A 211 RILRYFRFYGRIVDKPGD---HDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLDVAPYIGLPANA 287 (448)
T ss_dssp HHHHHHHHHHHSCSSSSC---CCHHHHHHHHHSCTTGGGSCSHHHHHHHHHHHTSTTHHHHHHHHHHTTCGGGGTCCCCS
T ss_pred HHHHHHHHHHHcCcCCCC---cCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHcCCCHHHHHHHHHHCCCceEecCcchh
Confidence 999999999999 96 6 99999999999999999999999999999999999887777777776666 7 89987
Q ss_pred chhhHHHHHHHHHHHhhhhhhhcccceeeccCCCChhHHHHHHHHHhCCCCCchhhHHHHh
Q psy11686 757 ATTMREYIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVLSAI 817 (939)
Q Consensus 757 ~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~l~~~~l~~f~~RL~l~~~~~r~~ll~ai 817 (939)
.-.. +..++.+.... ....+..|..-+. +-....+++.||.++. ...+.+...+
T Consensus 288 ~i~~---~~~~l~~~~~~-~~~~~l~lAaLlh--Di~ka~~i~~rLkls~-~~~~~v~~Lv 341 (448)
T 1ou5_A 288 SLEE---FDKVSKNVDGF-SPKPVTLLASLFK--VQDDVTKLDLRLKIAK-EEKNLGLFIV 341 (448)
T ss_dssp CCHH---HHHHHHHHTTS-CCCHHHHHGGGCC--STTTTHHHHHHHCCCT-THHHHHHHHT
T ss_pred hHHH---HHHHHHHHHhc-CCCHHHHHHHHhc--ChHHHHHHHHHcCCCH-HHHHHHHHHH
Confidence 5322 22333322211 1112222333232 2345788999999998 5555444433
No 10
>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4
Probab=100.00 E-value=3.7e-35 Score=334.51 Aligned_cols=250 Identities=16% Similarity=0.112 Sum_probs=189.0
Q ss_pred ccccccccee-ecCCCCCCccccCCCCCcccccCCCcccccchhHHHHHHHHHHhhCeEEeecccCeEE-------EEEE
Q psy11686 543 PRATLQGARL-LTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVT-------AKVL 614 (939)
Q Consensus 543 ~i~~m~V~Sl-I~~P~~D~dI~t~a~~~~~~~~~~~df~~~~~~~~~~l~~~~~~~g~~~~~~~~g~~~-------~~v~ 614 (939)
-++++.||++ +++|+.|+|+++++.+. +| .+++.+.|.. ....+..|||++ ++|+
T Consensus 14 y~VGG~VRD~llg~~~~D~Di~~~~~~~--------~~-------~~~~~~~~~~--~~~~~~~~~t~~v~~~~~~~e~~ 76 (390)
T 1vfg_A 14 YIVGGVVRDILLGKEVWDVDFVVEGNAI--------EL-------AKELARRHGV--NVHPFPEFGTAHLKIGKLKLEFA 76 (390)
T ss_dssp EEETHHHHHHHTTCCCSEEEEEESSCHH--------HH-------HHHHHHHHTC--CCEEETTTTEEEEEETTEEEEEE
T ss_pred EEEChHHHHHHcCCCCCCEEEEEeCChH--------HH-------HHHHHHHcCC--ceeecCCCcEEEEEECCEEEEEe
Confidence 4677889987 79999999999998765 21 1233333311 124577888875 4699
Q ss_pred eeccCCCC---------CCCccCCCcccchhHhhhcccCCCCCCCeEEeCcCcHHHHhcCcccccCCccccchhchhhHH
Q psy11686 615 SYRNRREK---------EDRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLRIL 685 (939)
Q Consensus 615 tfr~~~~~---------~~~~~~Dl~rRDfTINA~a~~~~~~~~g~liD~~gG~~DL~~~~iR~v~~~~~~f~EDPlRil 685 (939)
|||.+..+ .+++++||.||||||||||++++...+|+|+|||||++||++|+||++++. +|.|||+|||
T Consensus 77 ~~R~e~~~~~~~~p~v~~~~l~~Dl~RRDfTiNAla~~~~~~~~g~l~D~~~G~~DL~~~~ir~v~~~--~F~eDPlRiL 154 (390)
T 1vfg_A 77 TARRETYPRPGAYPKVEPASLKEDLIRRDFTINAMAISVNLEDYGTLIDYFGGLRDLKDKVIRVLHPV--SFIEDPVRIL 154 (390)
T ss_dssp ECCSCC---------CCCCCHHHHHHTSSBGGGSCEEECCGGGTTCEECSSCHHHHHHTTEECBSSTT--HHHHCTTHHH
T ss_pred ccCcccCCCCCCCCccCCCCHHHHHhhCCCchhheeecccCCCCCeEEeCCCCHHHHhCCeeEeCCcc--chhhCHHHHH
Confidence 99986532 248999999999999999999754446999999999999999999999974 9999999999
Q ss_pred HHHHHHHHhCCCCCCChHHHHHHHHHhhh--hhcCCCHHHHHHHHHHHHcCCChHHHHHHHHHhcCc--ccccccchh-h
Q psy11686 686 RYFRFFARICNNPNNHKEEVLSAIKNNLD--GLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL--LFSKLKATT-M 760 (939)
Q Consensus 686 Ra~RFaarlgf~~~~i~~~t~~ai~~~~~--~l~~vs~eRi~~El~kil~~~~~~~~~~~l~~~~~l--lfp~l~~~~-~ 760 (939)
||+||++||||. |+++|+++|++++. .|..+|.|||+.||.|||.++++...+..|.+.+.+ +||++.... .
T Consensus 155 Ra~Rfaa~~gf~---i~~~T~~~i~~~~~~~~l~~~s~eRi~~El~kiL~~~~~~~~l~~l~~~glL~~~lPe~~~~~~~ 231 (390)
T 1vfg_A 155 RALRFAGRLNFK---LSRSTEKLLKQAVNLGLLKEAPRGRLINEIKLALREDRFLEILELYRKYRVLEEIIEGFQWNEKV 231 (390)
T ss_dssp HHHHHHHHHTCE---ECHHHHHHHHHHHHTTGGGTSCHHHHHHHHHHHHHCSSHHHHHHHHHHTTCHHHHSTTCCCCHHH
T ss_pred HHHHHHHHcCCC---CCHHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHcCCCHHHHHHHHHHcCCHHHHhHhhhhhhhH
Confidence 999999999997 99999999999965 799999999999999999999877777766666655 799987543 1
Q ss_pred ---HHHHHHHHHHHhhhhhhhcccceeec----cCCCChhHHHHHHHHHhCCCCCchhhHHH
Q psy11686 761 ---REYIVELMKYKEKSELIKDFHKWRLP----TFPMNGNIIRQFFARICNNPNNHKEEVLS 815 (939)
Q Consensus 761 ---~~~~~~l~~~~~~~~~~~~~~~w~~~----~~~l~~~~l~~f~~RL~l~~~~~r~~ll~ 815 (939)
...+...+.|+...........|.++ ++.++.....++|.|+.++. ...+.+..
T Consensus 232 ~q~l~~~~~~~~~~~~~~~~~~~~~~~l~laaLlhdi~~~~a~~~~~rL~ls~-~~~~~v~~ 292 (390)
T 1vfg_A 232 LQKLYALRKVVDWHALEFSEERIDYGWLYLLILISNLDYERGKHFLEEMSAPS-WVRETYKF 292 (390)
T ss_dssp HHHHHHHHHHHHHHHHHGGGSCCCHHHHHHHHHHCSCCSSTTHHHHHHTTCCH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHhhhccccchHHHHHHHHHccCCHHHHHHHHHHcCCCH-HHHHHHHH
Confidence 22333344454432222223445555 45666677899999999998 44444433
No 11
>1miw_A TRNA CCA-adding enzyme; tRNA nucleotidyltransferase, translation, transferase; HET: ATP; 3.00A {Geobacillus stearothermophilus} SCOP: a.173.1.1 d.218.1.4 PDB: 1miv_A* 1miy_A*
Probab=100.00 E-value=2.4e-35 Score=336.70 Aligned_cols=243 Identities=21% Similarity=0.247 Sum_probs=184.8
Q ss_pred ccccccccee-ecCCCCCCccccCCCCCcccccCCCcccccchhHHHHHHHHHHhhCeEEeecccCeEEE-------EEE
Q psy11686 543 PRATLQGARL-LTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVTA-------KVL 614 (939)
Q Consensus 543 ~i~~m~V~Sl-I~~P~~D~dI~t~a~~~~~~~~~~~df~~~~~~~~~~l~~~~~~~g~~~~~~~~g~~~~-------~v~ 614 (939)
-++++.||++ +++++.|+||++++.|+ ++.++++. ...+|..||++++ +|+
T Consensus 23 y~VGG~VRD~lLg~~~~D~Di~~~~~~~----------------~~~~~~~~-----~~~~g~~~gt~~v~~~~~~~ev~ 81 (404)
T 1miw_A 23 YFVGGAVRDLLLGRPIGDVDIATSALPE----------------DVMAIFPK-----TIDVGSKHGTVVVVHKGKAYEVT 81 (404)
T ss_dssp EEESHHHHHHHHTCCCCCCEEEESSCHH----------------HHHHHCSS-----EEEEEGGGTEEEEEETTEEEEEE
T ss_pred EEECHHHHHHHcCCCCCCEEEEeCCCHH----------------HHHHHhhh-----hcccCcCCCeEEEEECCeEEEEe
Confidence 4677889987 79999999999998888 55555542 2345777888764 689
Q ss_pred eeccCCCC-----------CCCccCCCcccchhHhhhcccCCCCCCCeEEeCcCcHHHHhcCcccccCCccccchhchhh
Q psy11686 615 SYRNRREK-----------EDRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDPVSRIQEDYLR 683 (939)
Q Consensus 615 tfr~~~~~-----------~~~~~~Dl~rRDfTINA~a~~~~~~~~g~liD~~gG~~DL~~~~iR~v~~~~~~f~EDPlR 683 (939)
|||.+..+ .+++++||.||||||||||++. +|+|+|||||++||++|+||++++|..+|.|||+|
T Consensus 82 t~R~e~~~~~~~~p~~v~~~~~l~~Dl~RRDfTiNAla~~~----~g~l~D~~~G~~Dl~~~~ir~~~~p~~~f~eDPlR 157 (404)
T 1miw_A 82 TFKTDGDYEDYRRPESVTFVRSLEEDLKRRDFTMNAIAMDE----YGTIIDPFGGREAIRRRIIRTVGEAEKRFREDALR 157 (404)
T ss_dssp ECEECC---------CCEECSCHHHHHHTSSBSGGGCEECT----TCCEECTTCHHHHHHHTEECBSSCHHHHHHHCTHH
T ss_pred eecccCCCCCCcCCcccccCCcHHHHHHhCCCCcchheeCC----CCCEeCCCCCHHHHhCCeeeecCChHhhHHhhHHH
Confidence 99986432 1589999999999999999985 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCChHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHcCCChHHHHHHHHHhcCc-ccccccchhhHH
Q psy11686 684 ILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL-LFSKLKATTMRE 762 (939)
Q Consensus 684 ilRa~RFaarlgf~~~~i~~~t~~ai~~~~~~l~~vs~eRi~~El~kil~~~~~~~~~~~l~~~~~l-lfp~l~~~~~~~ 762 (939)
||||+||++||||. |+++|+++|++++..|..+|.|||+.||.|||.++++...+..|.+.+++ .+|++.... .
T Consensus 158 iLRa~Rfaa~lgf~---i~~~T~~ai~~~~~~l~~is~eRi~~El~kiL~~~~~~~~l~~l~~~Gll~~lPe~~~~~--~ 232 (404)
T 1miw_A 158 MMRAVRFVSELGFA---LAPDTEQAIVQNAPLLAHISVERMTMEMEKLLGGPFAARALPLLAETGLNAYLPGLAGKE--K 232 (404)
T ss_dssp HHHHHHHHHHHCCE---ECHHHHHHHHHHGGGGGGSCHHHHHHHHHHHHTSSSHHHHHHHHHHSTTTTSSTTCSSCH--H
T ss_pred HHHHHHHHHHcCCC---CCHHHHHHHHHHHhhhccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhcchhhCcchhhHH--H
Confidence 99999999999997 99999999999999999999999999999999999776777766665555 358776422 1
Q ss_pred HHHHHHHHHhhhhhhhcccceeeccCCCChhHHHHHHHHHhCCCCCchhhHHHHh
Q psy11686 763 YIVELMKYKEKSELIKDFHKWRLPTFPMNGNIIRQFFARICNNPNNHKEEVLSAI 817 (939)
Q Consensus 763 ~~~~l~~~~~~~~~~~~~~~w~~~~~~l~~~~l~~f~~RL~l~~~~~r~~ll~ai 817 (939)
.+..+.. .....+......|...++.++.....+++.||.++. ...+.+...+
T Consensus 233 ~~~~l~~-~~~~~~~~~~l~~aaLlhdigk~~a~~~l~rLkls~-~~~~~v~~Lv 285 (404)
T 1miw_A 233 QLRLAAA-YRWPWLAAREERWALLCHALGVQESRPFLRAWKLPN-KVVDEAGAIL 285 (404)
T ss_dssp HHHHGGG-SCGGGCCSHHHHHHHHHHHHTCSCHHHHHHHTTCCH-HHHHHHHHHH
T ss_pred HHHHHHH-HhccccCChHHHHHHHHHhCCHHHHHHHHHHcCCCH-HHHHHHHHHH
Confidence 1111100 000001112234555554444456788999999987 4444444433
No 12
>3aql_A Poly(A) polymerase; transferase/RNA, ATP-binding, nucleotide-binding, RNA-bindin transferase, nucleotidyltransferase, ATP binding, A-phospho; 3.00A {Escherichia coli} PDB: 3aqn_A* 3aqk_A 3aqm_A
Probab=100.00 E-value=2.8e-34 Score=328.28 Aligned_cols=187 Identities=25% Similarity=0.317 Sum_probs=159.4
Q ss_pred ccccccccee-ecCCCCCCccccCCCCCcccccCCCcccccchhHHHHHHHHHHhhCeEEeecccCeEE-------EEEE
Q psy11686 543 PRATLQGARL-LTRPPNPHSVRFKSGPDGKMKLDSPEFHSCFTPELKRLAGIFEKHGYQLRIAGEGTVT-------AKVL 614 (939)
Q Consensus 543 ~i~~m~V~Sl-I~~P~~D~dI~t~a~~~~~~~~~~~df~~~~~~~~~~l~~~~~~~g~~~~~~~~g~~~-------~~v~ 614 (939)
-++++.||++ |+++++|+||+++++++ ++.++|+.. ..+|..||+++ ++|+
T Consensus 36 ylVGG~VRD~LLg~~~~D~Di~t~a~p~----------------~~~~~f~~~-----~~~g~~f~~~~v~~~~~~~ev~ 94 (415)
T 3aql_A 36 WLVGGGVRDLLLGKKPKDFDVTTNATPE----------------QVRKLFRNC-----RLVGRRFRLAHVMFGPEIIEVA 94 (415)
T ss_dssp EEETHHHHHHHHSSCCSCCEEEESSCHH----------------HHHHHTTTS-----CCCCCSSSCCEEESSSCEEEEE
T ss_pred EEECHHHHHHHcCCCCCCEEEEcCCCHH----------------HHHHHhhhC-----eEecccCCEEEEEECCcEEEEe
Confidence 4678899997 79999999999999988 666665432 34566677654 5699
Q ss_pred eeccCCCC---------------------CCCccCCCcccchhHhhhcccCCCCCCCeEEeCcCcHHHHhcCcccccCCc
Q psy11686 615 SYRNRREK---------------------EDRIGENQPFRKLTLSVQDKDRSFRLDGTVYDYFNGHEDLKKGVCAFVGDP 673 (939)
Q Consensus 615 tfr~~~~~---------------------~~~~~~Dl~rRDfTINA~a~~~~~~~~g~liD~~gG~~DL~~~~iR~v~~~ 673 (939)
|||.+... ..++++||.||||||||||+++ .+|+|+|||||++||++|+||++++|
T Consensus 95 t~R~~~~~~~~~~~~~~~~~~g~~~~~~~~~tl~eDl~RRDFTINAla~~~---~~~~l~D~~gG~~DL~~~~Ir~v~~p 171 (415)
T 3aql_A 95 TFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSV---ADFTVRDYVGGMKDLKDGVIRLIGNP 171 (415)
T ss_dssp ECCC-----------------------CCCCCHHHHHTTSSBSGGGCEEET---TTCCEECSSSHHHHHHHTEECBSSCH
T ss_pred eecccccccccccccccccCCCcccccccCCCHHHHHhcCCccceeEEEeC---CCCeeeCCCCCHHHHhCCeEEecCCh
Confidence 99975321 1478999999999999999997 57899999999999999999999999
Q ss_pred cccchhchhhHHHHHHHHHHhCCCCCCChHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHcCCChHHHHHHHHHhcCc--c
Q psy11686 674 VSRIQEDYLRILRYFRFFARICNNPNNHKEEVLSAIKNNLDGLHNISGERIWTELNKILGGSFSKEMMLKMLYQNLL--L 751 (939)
Q Consensus 674 ~~~f~EDPlRilRa~RFaarlgf~~~~i~~~t~~ai~~~~~~l~~vs~eRi~~El~kil~~~~~~~~~~~l~~~~~l--l 751 (939)
..+|.|||+|||||+||+++|||. |+++|+++|++++..|..+|.|||+.||.|||.++++...+..|.+.+++ +
T Consensus 172 ~~~F~eDPlRiLRa~Rfaarlgf~---i~~~T~~ai~~~~~~l~~is~eRi~~E~~kiL~~~~~~~~l~~l~~~GlL~~~ 248 (415)
T 3aql_A 172 ETRYREDPVRMLRAVRFAAKLGMR---ISPETAEPIPRLATLLNDIPPAHLFEESLKLLQAGYGYETYKLLCEYHLFQPL 248 (415)
T ss_dssp HHHHHHCTHHHHHHHHHHHHTTCE---ECHHHHTHHHHHGGGGGGSCHHHHHHHHHHHHTSSCHHHHHHHHHHTTCSTTT
T ss_pred hhhhhhCHHHHHHHHHHHHHhCCC---CCHHHHHHHHHHHHhhhcCChHHHHHHHHHHHcCCCHHHHHHHHHHcCChHHh
Confidence 889999999999999999999997 99999999999999999999999999999999999877777776666665 7
Q ss_pred ccccc
Q psy11686 752 FSKLK 756 (939)
Q Consensus 752 fp~l~ 756 (939)
||++.
T Consensus 249 lPe~~ 253 (415)
T 3aql_A 249 FPTIT 253 (415)
T ss_dssp CHHHH
T ss_pred chhHH
Confidence 88764
No 13
>1xdy_A Bacterial sulfite oxidase; bioinformatics, sequence analysis, electron transfer, oxidoreductase, molybdoenzymes, molybdopterin; HET: MTE; 2.20A {Escherichia coli} SCOP: d.176.1.1 PDB: 1xdq_A*
Probab=99.96 E-value=1.4e-31 Score=289.79 Aligned_cols=202 Identities=10% Similarity=0.008 Sum_probs=160.8
Q ss_pred cccccCCCCCCCCCCCccccccccCCCCceEee-----------------EEEEEeecccCCcceeeeHHHHHHhccc--
Q psy11686 124 LKATSLKPYNAEPPPSMLVENFLTPSLLSQVGS-----------------STITLDQAIVSKQLSSFKHSDEKLKLVK-- 184 (939)
Q Consensus 124 l~v~~~~P~n~e~p~~~l~~~~~TP~~~~~v~~-----------------w~l~v~~G~v~~~p~~~t~~dl~~~~p~-- 184 (939)
+.+.+..|||+|+|+. ..++|||++.||+++ |+|+|+ |+|++ |++||++||+++||+
T Consensus 20 ~~~~~~~~~~~~~~~t--~~~~iT~~~~fY~~~~~~~~p~~~~~~id~~~w~L~V~-G~V~~-p~~ltl~dL~~~lP~~e 95 (298)
T 1xdy_A 20 LEFSKPAAWQNNLPLT--PADKVSGYNNFYEFGLDKADPAANAGSLKTDPWTLKIS-GEVAK-PLTLDHDDLTRRFPLEE 95 (298)
T ss_dssp CCCBCCGGGCCCCCCC--CHHHHTTSCCCGGGCSSTTHHHHHGGGSCCSSCEEEEE-ESBSS-CEEEEHHHHHHTSCCEE
T ss_pred cccCCCCCCCCCCCCC--cHHHcCCCCCeEEecCCcCCcccccCcccCCCeEEEEe-eecCC-CeEeeHHHHhccCCCeE
Confidence 5677789999999877 446899999999884 999999 99998 999999999944999
Q ss_pred -----eeccccC--ccCccccHHHHHhCCCCC-----------C-------------------CC--CcchhhhcCC---
Q psy11686 185 -----VMAGNIS--QEDSKLAAKDIASDPYVM-----------E-------------------PV--RSPLLKATSL--- 222 (939)
Q Consensus 185 -----~C~gn~~--~~~~~~~~~~vL~~~g~~-----------d-------------------~~--~ipl~~a~~~--- 222 (939)
+|+++|. ..|+|+++++||+.||+. | +| +|||++|+++
T Consensus 96 ~~~~l~Cv~~Ws~~~~W~GV~L~dLL~~aG~~~~A~~V~f~~~dd~~~~~G~~~~~~~~~~~~~Y~~slpl~~a~~~~~l 175 (298)
T 1xdy_A 96 RIYRMRCVEAWSMVVPWIGFPLHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLTL 175 (298)
T ss_dssp EEEEEEETTTEEEEEEEEEEEHHHHHHHHCBCTTCCEEEEEECCCTTTCGGGTCTTTTTTCCSSCEEEEEHHHHHSTTCE
T ss_pred EEEEEEecCCCcceeEEEeEEHHHHHHHcCCCCCCeEEEEEeCCChhcccCccccccccccCCCeEEEEEHHHhcCCCEE
Confidence 8999987 689999999999999964 1 12 4899999998
Q ss_pred --CCCCCCCCCCC-CCCceEeeCC------cceeeeEEEeecCCCCcccccCCCccCCCCCCCCccCCCCCCcccccceE
Q psy11686 223 --KPYNAEPPPSM-LYSSLLRIPF------CSHTGKVILSDHESTSHWQQNDYKGFSPSTDWDTVDFAKSPAIQELPVIS 293 (939)
Q Consensus 223 --~~mNGepLp~~-G~PlRlvvPg------vKWl~~I~~~~~~~~g~w~~~~Y~~~~~~~~~~~~~~~~~~~i~~~~v~S 293 (939)
|+|||||||++ |||+|||||| ||||++|+|++++.+||||+++|+...-..+ .+..-..|.|+|...+
T Consensus 176 LA~~mNGepLp~~hG~PlRLVVPg~yG~ksvKwl~~Iev~~~~~~g~We~~~y~~yg~~~n---~n~~v~~P~w~q~~er 252 (298)
T 1xdy_A 176 MTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYGFYAN---VNPYVDHPRWSQATER 252 (298)
T ss_dssp EEEEETTEECCGGGTCSCEEECTTBCGGGSCCSEEEEEEESSCCCCHHHHHCTTTCCSSCB---CCTTSCBTTBCCSEEE
T ss_pred EEEeeCCeECCcccCCceEEEeCCccccCcceeccEEEEEeCCCCCchhhcCccccCcccC---CCCCCCCCccccccee
Confidence 99999999999 9999999999 9999999999999999999999986542111 1112234577777777
Q ss_pred EEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeE
Q psy11686 294 AICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWH 339 (939)
Q Consensus 294 ~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~ 339 (939)
+|.. .+... ..++.+++|.|.|..|.++..++|.++..-
T Consensus 253 ~i~~--g~~~~-----~~r~~t~~fnGy~~~va~ly~~md~~~~~~ 291 (298)
T 1xdy_A 253 FIGS--GGILD-----VQRQPTLLFNGYADQVASLYRGLDLRENFL 291 (298)
T ss_dssp ECCC--C-----------CEECCGGGGTHHHHHHHHTTCCC-----
T ss_pred EEcC--CCcee-----ecccCceeecccHHHhhhhhhCcccchhhh
Confidence 7641 11011 235688999999989999999999987554
No 14
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=99.94 E-value=1.2e-27 Score=268.40 Aligned_cols=161 Identities=24% Similarity=0.299 Sum_probs=133.6
Q ss_pred ccHHHHh-hccccCcceeeccCCCCCCCccccCCCCCCCcccceeeeeeeccccHHHHHHHcCCC---CCCCc---CCCC
Q psy11686 403 FAEEKVR-TFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGIS---PDQSL---DSAD 475 (939)
Q Consensus 403 f~~~~l~-~~p~~~~~~~l~Cagn~r~~~~~~~~~~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~---~~~~~---~g~d 475 (939)
|++++|+ +||+++++++++|+||+|++|..++++.|.+|+.|+|||++|+||+|+|||++||++ +++++ +|.|
T Consensus 71 ltl~dL~~~lp~~~~~~~l~C~gN~r~~~~~~~~v~G~~w~~gav~~~~W~GV~L~dlL~~ag~~~~~~~a~~V~~~~~D 150 (372)
T 2a9d_A 71 LSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGFPEELQGEWHVCFEGLD 150 (372)
T ss_dssp EEHHHHHHHSCCEEEEEEEECTTTTHHHHHTTSCCSSCCCCTTSEEEEEEEEEEHHHHHHHTTCCSCCSSCCEEEEEEEE
T ss_pred EeHHHHHhhCCCeEEEEEEEecCCchhhccccccccccccccCceecceEEeEEHHHHHHhcCCCcCCCCcEEEEEEecC
Confidence 5666666 789999999999999999999989999999999999999999999999999999997 56666 7777
Q ss_pred ------CceeeEEeeeeeccc--------CCCCCCCCCCCCCCcceeecceee------EEEEEEecCCcCce-----ee
Q psy11686 476 ------VQHVHVEIWSKAVDS--------SYNTQPESFANIWNLRGVLSNAYH------RVRVEIWSKAVDSS-----YN 530 (939)
Q Consensus 476 ------~~~~~~~~~~~a~d~--------~~Ng~pl~~~~g~p~R~vvp~~~~------~~~i~~~~~~~~~~-----y~ 530 (939)
.-.+++++ ++|||+ +||||||+++||||||+||||++| ..+|+|.++++... |+
T Consensus 151 ~~~~~~~Y~~sipl-~~a~dp~~d~lLA~~mNGepL~~~hG~PlRlVvPg~~G~ksvKwl~~I~v~~~~~~~~w~~~~Y~ 229 (372)
T 2a9d_A 151 ADPGGAPYGASIPY-GRALSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQNDYK 229 (372)
T ss_dssp ECTTCCEEEEEEEH-HHHHCGGGCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCCHHHHSSSC
T ss_pred CCCCCCCeEEEeEH-HHHhCCCCCEEEEECCCCeECCcccCceEEEEecchhheeecceeeEEEEeccCCCCcceeccee
Confidence 45588998 899972 899999999999999999999984 46999999988544 44
Q ss_pred c-CCCCC----CCCCCccccccccceeecCCCCCCcccc
Q psy11686 531 T-QPENG----HPSGYQPRATLQGARLLTRPPNPHSVRF 564 (939)
Q Consensus 531 ~-~~~~~----~~~~~~~i~~m~V~SlI~~P~~D~dI~t 564 (939)
. .|... .+....+|++|+|+|+|+.|..+..+..
T Consensus 230 ~~~p~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~ 268 (372)
T 2a9d_A 230 GFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVPP 268 (372)
T ss_dssp CCCTTCCTTTCCGGGSCCCCBCCCEEEEEESCTTCEECS
T ss_pred EcCCCCCccccccccCcccccccccEEEecCCCCCEecc
Confidence 3 22211 1123358999999999999998877743
No 15
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=99.93 E-value=5.3e-27 Score=263.37 Aligned_cols=159 Identities=22% Similarity=0.284 Sum_probs=132.5
Q ss_pred ccHHHHhh-ccccCcceeeccCCCCCCCccccCCCCCCCcccceeeeeeeccccHHHHHHHcCCCCCCCc---CCCCC--
Q psy11686 403 FAEEKVRT-FNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSL---DSADV-- 476 (939)
Q Consensus 403 f~~~~l~~-~p~~~~~~~l~Cagn~r~~~~~~~~~~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~~~~~~---~g~d~-- 476 (939)
|++++|++ ||+++++++++|+||+|++| .+++.|.+|+.|+|||++|+||+|+|||++||+++++++ +|.|.
T Consensus 84 ltl~dL~~~lp~~~~~~~l~C~~N~R~~~--~~~~~G~~W~~gai~~~~W~GV~L~dlL~~ag~~~~a~~V~~~~~D~~~ 161 (373)
T 2blf_A 84 LSLQDLKNDFPASEVVAVNQCSGNSRGFV--EPRVGGGQLANGAMGNARWRGVPLKAVLEKAGVQAGAKQVTFGGLDGPV 161 (373)
T ss_dssp ECHHHHHHHSCCEEEEEEEECTTTTGGGC--SSCCSSCCCCSCSEEEEEEEEEEHHHHHHHHCBCTTCCEEEEEESCBCS
T ss_pred EeHHHHhccCCCeEEEEEEEeccCccccc--cccccCCCccccceeeeEEEEEEHHHHHHhcCCCCCCcEEEEEecCCCC
Confidence 55555666 78999999999999999986 589999999999999999999999999999999998887 77775
Q ss_pred ------ceeeEEeeeeeccc------CCCCCCCCCCCCCCcceeecceee------EEEEEEecCCcCc-----eeecCC
Q psy11686 477 ------QHVHVEIWSKAVDS------SYNTQPESFANIWNLRGVLSNAYH------RVRVEIWSKAVDS-----SYNTQP 533 (939)
Q Consensus 477 ------~~~~~~~~~~a~d~------~~Ng~pl~~~~g~p~R~vvp~~~~------~~~i~~~~~~~~~-----~y~~~~ 533 (939)
-.+++++ ++||++ +||||||+++||||+|+||||++| ..+|+|.++++.. .|+.+.
T Consensus 162 ~~~~~~Y~~sipl-~~a~~~~~lLA~~mNGepL~~~hG~PlRlVvPg~~G~~svKwl~~I~v~~~~~~~~w~~~~Y~~p~ 240 (373)
T 2blf_A 162 IPETPDFVKALSI-DHATDGEVMLAYSMNGADLPWLNGYPLRLVVPGYYGTYWVKHLNEITVIDKEFDGFWMKTAYRIPD 240 (373)
T ss_dssp STTSCCCEEEEEH-HHHTSSCSEEEEEETTEECCGGGTTTCEEECTTBCGGGSCBSEEEEEEESSCCCCHHHHTSSEEES
T ss_pred CCCCCCEEEEEEH-HHhcCCCEEEEEeeCCeECCcccCCceEEEecCccccccceeccEEEEEecCCCCcceecccccCC
Confidence 4689998 999986 999999999999999999999874 4699999998844 455421
Q ss_pred C-------CCCCCCCccccccccceeecCCCCCCcccc
Q psy11686 534 E-------NGHPSGYQPRATLQGARLLTRPPNPHSVRF 564 (939)
Q Consensus 534 ~-------~~~~~~~~~i~~m~V~SlI~~P~~D~dI~t 564 (939)
. ...+....|+++|+|+|+|+.|..+..+..
T Consensus 241 ~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~ 278 (373)
T 2blf_A 241 NACACTEPGKAPTATIPINRFDVRSFITNVENGASVKA 278 (373)
T ss_dssp STTCCCSTTCCCSSEEECCBCCCEEEECSCCTTEEECS
T ss_pred ccccccCCCCcccccccceecccCEEEEecCCCCEecc
Confidence 1 111223467999999999999998887753
No 16
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=99.93 E-value=3.4e-27 Score=266.58 Aligned_cols=160 Identities=21% Similarity=0.320 Sum_probs=133.4
Q ss_pred ccHHHHhhccccCcceeeccCCCCCCCccccCCCCCCCcccceeeeeeeccccHHHHHHHcCCCCCCC-------c---C
Q psy11686 403 FAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQS-------L---D 472 (939)
Q Consensus 403 f~~~~l~~~p~~~~~~~l~Cagn~r~~~~~~~~~~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~~~~~-------~---~ 472 (939)
|++++|++||+++++++++|+||+|++|..++++.|.+|+.|||||++|+||+|+|||++||+++++. + +
T Consensus 79 ltl~dL~~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~a~W~GV~L~dlL~~aG~~~~a~~~~~~~~~V~f~ 158 (393)
T 1ogp_A 79 LFIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFV 158 (393)
T ss_dssp EEHHHHHTSCEEEEEEEEECTTTTHHHHHHHSCCCSCCCCSCCEEEEEEEEEEHHHHHHTTTCCTTCSCCTTCCCEEEEE
T ss_pred eeHHHHhcCCCEEEEEEEEecCCccccccccccccCccccccceecceEEeeEHHHHHHhcCCCcccccccCcceEEEEE
Confidence 55666667899999999999999999998899999999999999999999999999999999998774 4 6
Q ss_pred CCC--------CceeeEEeeeeeccc--------CCCCCCCCCCCCCCcceeecceee------EEEEEEecCCcCc---
Q psy11686 473 SAD--------VQHVHVEIWSKAVDS--------SYNTQPESFANIWNLRGVLSNAYH------RVRVEIWSKAVDS--- 527 (939)
Q Consensus 473 g~d--------~~~~~~~~~~~a~d~--------~~Ng~pl~~~~g~p~R~vvp~~~~------~~~i~~~~~~~~~--- 527 (939)
|.| .-.+++++ ++|||+ +||||||+++||||||+||||++| ..+|+|.+.++.+
T Consensus 159 g~D~~~~~~~~~Y~~sipl-~~al~~~~~vlLA~~mNGepL~~~hG~PlRLVvPg~~G~rsvKwL~~I~v~~~~~~~~w~ 237 (393)
T 1ogp_A 159 SVDRCKEENGGPYKASITL-SQATNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFM 237 (393)
T ss_dssp ESCCCGGGTTCCCEEEEEH-HHHHCGGGCCEEEEEETTEECCTTTTTTCEEECTTSCGGGSCCSEEEEEEESSCCCCHHH
T ss_pred EcCcccccCCCCeEEEeEH-HHHhCCCCCEEEEeCcCCeECCcccCceEEEEeCccccceeeeeccEEEEEecCCCCcce
Confidence 777 34588998 899975 899999999999999999999874 4699999998854
Q ss_pred --eeecCCCCCC-----CCCCccccccccceeecCCCCCCccc
Q psy11686 528 --SYNTQPENGH-----PSGYQPRATLQGARLLTRPPNPHSVR 563 (939)
Q Consensus 528 --~y~~~~~~~~-----~~~~~~i~~m~V~SlI~~P~~D~dI~ 563 (939)
.|+..|.+.+ .....++++|+|+|+|+.|..+..+.
T Consensus 238 ~~~Y~~~p~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~ 280 (393)
T 1ogp_A 238 QKDYKMFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVK 280 (393)
T ss_dssp HSSSCCCCTTCCTTTCCGGGSCCCCSCCCEEEECSSCSEEEEC
T ss_pred eccccccCCCCCcccccCCCCceeeeecccEEEeCCCCCCEec
Confidence 4443222211 12346899999999999999877764
No 17
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=99.93 E-value=8.8e-27 Score=268.83 Aligned_cols=161 Identities=24% Similarity=0.299 Sum_probs=132.7
Q ss_pred ccHHHHh-hccccCcceeeccCCCCCCCccccCCCCCCCcccceeeeeeeccccHHHHHHHcCCC---CCCCc---CCCC
Q psy11686 403 FAEEKVR-TFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGIS---PDQSL---DSAD 475 (939)
Q Consensus 403 f~~~~l~-~~p~~~~~~~l~Cagn~r~~~~~~~~~~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~---~~~~~---~g~d 475 (939)
|++++|+ +||+++++++++|+||+|++|..++++.|.+|+.|+|||++|+||+|+|||++||++ +++++ +|.|
T Consensus 165 ltl~dL~~~lp~~~~~~~l~C~gN~r~~~~~~~~v~G~~W~~gai~~~~W~Gv~L~dlL~~ag~~~~~~~a~~V~~~~~D 244 (466)
T 1sox_A 165 LSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGFPEELQGEWHVCFEGLD 244 (466)
T ss_dssp EEHHHHHHHSCEEEEEEEEECTTTTHHHHHTTSCCSSCCCCTTSEEEEEEEEEEHHHHHHHTTCCSCCSSCCEEEEEEEE
T ss_pred eeHHHHHhhCCCeEEEEEEEecCCCcccccccccccccccccCceecceEEEEEHHHHHHHcCCCCCCCCcEEEEEEecC
Confidence 4555555 678999999999999999999889999999999999999999999999999999997 56666 7777
Q ss_pred ------CceeeEEeeeeeccc--------CCCCCCCCCCCCCCcceeecceee------EEEEEEecCCcCce-----ee
Q psy11686 476 ------VQHVHVEIWSKAVDS--------SYNTQPESFANIWNLRGVLSNAYH------RVRVEIWSKAVDSS-----YN 530 (939)
Q Consensus 476 ------~~~~~~~~~~~a~d~--------~~Ng~pl~~~~g~p~R~vvp~~~~------~~~i~~~~~~~~~~-----y~ 530 (939)
.-.+++++ ++|||+ +||||||+++||||||+||||++| ..+|+|.++++... |+
T Consensus 245 ~~~~~~~Y~~sipl-~~a~~p~~~~lLA~~mNGepL~~~hG~PlRlvvPg~~G~~svKwl~~I~v~~~~~~~~w~~~~Y~ 323 (466)
T 1sox_A 245 ADPGGAPYGASIPY-GRALSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQNDYK 323 (466)
T ss_dssp ECTTCCEEEEEEEH-HHHHCTTTCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCSHHHHSSSC
T ss_pred CCCCCCCEEEEeEH-HHHhCCCCCEEEEECcCCeECChhcCceEEEEecchhheeeeeeccEEEEEeCCCCCcceecCce
Confidence 45588998 899972 899999999999999999999984 46999999988544 44
Q ss_pred c-CCCCC----CCCCCccccccccceeecCCCCCCcccc
Q psy11686 531 T-QPENG----HPSGYQPRATLQGARLLTRPPNPHSVRF 564 (939)
Q Consensus 531 ~-~~~~~----~~~~~~~i~~m~V~SlI~~P~~D~dI~t 564 (939)
. +|... .+....+|++|+|+|+|+.|..+..+..
T Consensus 324 ~~~p~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~ 362 (466)
T 1sox_A 324 GFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVPP 362 (466)
T ss_dssp CCCTTCCTTTCCGGGSCCCCBCCCEEEEEESCTTCEECS
T ss_pred ecCCCCCccccccccccccccccccEEEecCCCCCEecc
Confidence 3 22211 1123358999999999999998877743
No 18
>2bih_A Nitrate reductase [NADPH]; flavoprotein, nitrate assimilation, oxidoreductase; HET: MTV; 2.60A {Pichia angusta}
Probab=99.92 E-value=2.9e-26 Score=262.47 Aligned_cols=162 Identities=20% Similarity=0.253 Sum_probs=135.9
Q ss_pred ccHHHHhh-ccccCcceeeccCCCCCCCccccCCCCCCCcccceeeeeeeccccHHHHHHHcCCCCCCCc---CCCCC--
Q psy11686 403 FAEEKVRT-FNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSL---DSADV-- 476 (939)
Q Consensus 403 f~~~~l~~-~p~~~~~~~l~Cagn~r~~~~~~~~~~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~~~~~~---~g~d~-- 476 (939)
|++++|++ ||+++++++++|+||+|++|..++++.|.+|+.|+|||++|+||+|+|||++||+++++++ +|.|.
T Consensus 109 ltl~dL~~~lp~~~~~~~l~CvgN~r~e~~~v~~~~G~~W~~~avs~a~WtGV~L~dlL~~aG~~~~A~~V~f~g~D~~~ 188 (474)
T 2bih_A 109 IKLSDIMEQFDIYSTPVTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKARPSKRARFVWMEGADNPA 188 (474)
T ss_dssp EEHHHHHHHSCCEEEEEEEECTTTTHHHHHHHSCCSSCCCCSCCEEEEEEEEEEHHHHHHHTCBCTTCCEEEEEESCCCT
T ss_pred eeHHHHhhcCCCeEEEEEEEccCCccccccccccccccccccCceeeeEEEeEEHHHHHHhcCCCCCceEEEEEecCCCC
Confidence 55556665 7899999999999999999988999999999999999999999999999999999998887 78773
Q ss_pred ---ceeeEEeeeeeccc--------CCCCCCCCCCCCCCcceeecceee------EEEEEEecCCcCceee-----cCCC
Q psy11686 477 ---QHVHVEIWSKAVDS--------SYNTQPESFANIWNLRGVLSNAYH------RVRVEIWSKAVDSSYN-----TQPE 534 (939)
Q Consensus 477 ---~~~~~~~~~~a~d~--------~~Ng~pl~~~~g~p~R~vvp~~~~------~~~i~~~~~~~~~~y~-----~~~~ 534 (939)
-.+++++ ++|||+ +||||||+++||||||+||||+++ ..+|+|.+.++...|+ +.|.
T Consensus 189 ~g~Y~~sipl-~~ald~~~dvlLA~~mNGepLp~~hG~PlRLVvPg~~G~rsvKWL~~Iev~~~~~~g~~~~~~yrv~p~ 267 (474)
T 2bih_A 189 NGAYGTCIRL-SWCMDPERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYFDNRVLPT 267 (474)
T ss_dssp TSSCEEEEEH-HHHTCTTTCCEEEEEETTEECCGGGTTTCEEECTTBBGGGSCSSEEEEEEESSCCCCHHHHHSSBCCCT
T ss_pred CCCeEEEEEH-HHHhCcCCCEEEEEeeCCeECCccCCCeeEEEecccccCCccccCCEEEEEeccCCCceeeecccccCC
Confidence 3588998 899984 899999999999999999999984 4699999999866554 3222
Q ss_pred CCC-----------CCCCccccccccceeecCCCCCCccccC
Q psy11686 535 NGH-----------PSGYQPRATLQGARLLTRPPNPHSVRFK 565 (939)
Q Consensus 535 ~~~-----------~~~~~~i~~m~V~SlI~~P~~D~dI~t~ 565 (939)
... .....++++|+|+|+|+.|..+..+..+
T Consensus 268 ~~~~~~~~~~~~~W~~~~~~i~~~~vnS~I~~P~~~e~v~~~ 309 (474)
T 2bih_A 268 MVTPEMAKSDDRWWKDERYAIYDLNLQTIICKPENQQVIKIS 309 (474)
T ss_dssp TCCHHHHHTCGGGGSCGGGBCCBCCCEEEEEESCTTCEEECC
T ss_pred CCCccccccccCccccCcceeeccccceEEecCCCCCEeecC
Confidence 111 1123579999999999999988888543
No 19
>2bii_A Nitrate reductase [NADPH]; FAD, flavoprotein, heme, molybdenum, nitrate assimilation, oxidoreductase; HET: MTV; 1.70A {Pichia angusta}
Probab=99.92 E-value=3e-26 Score=260.07 Aligned_cols=161 Identities=20% Similarity=0.254 Sum_probs=135.5
Q ss_pred ccHHHHhh-ccccCcceeeccCCCCCCCccccCCCCCCCcccceeeeeeeccccHHHHHHHcCCCCCCCc---CCCCC--
Q psy11686 403 FAEEKVRT-FNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSL---DSADV-- 476 (939)
Q Consensus 403 f~~~~l~~-~p~~~~~~~l~Cagn~r~~~~~~~~~~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~~~~~~---~g~d~-- 476 (939)
|++++|++ ||+++++++++|+||+|++|..++++.|.+|+.|+|||++|+||+|+|||++||+++++++ +|.|.
T Consensus 59 ltl~dL~~~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~~ai~~a~WtGV~L~dlL~~ag~~~~a~~V~f~~~D~~~ 138 (424)
T 2bii_A 59 IKLSDIMEQFDIYSTPVTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKARPSKRARFVWMEGADNPA 138 (424)
T ss_dssp EEHHHHHHHSCCEEEEEEEECTTTTHHHHHHHSCCSSCCCCSCCEEEEEEEEEEHHHHHHHHCBCTTCCEEEEEESCCCT
T ss_pred eeHHHHhccCCCeEEEEEEEecCCccccccccccccccccccCceEeeEEEeeEHHHHHHhcCCCCCceEEEEEecCCCC
Confidence 55666665 8899999999999999999988999999999999999999999999999999999998887 78773
Q ss_pred ---ceeeEEeeeeeccc--------CCCCCCCCCCCCCCcceeecceee------EEEEEEecCCcCceee-----cCCC
Q psy11686 477 ---QHVHVEIWSKAVDS--------SYNTQPESFANIWNLRGVLSNAYH------RVRVEIWSKAVDSSYN-----TQPE 534 (939)
Q Consensus 477 ---~~~~~~~~~~a~d~--------~~Ng~pl~~~~g~p~R~vvp~~~~------~~~i~~~~~~~~~~y~-----~~~~ 534 (939)
-.+++++ ++|||+ +||||||+++||||||+||||+++ ..+|+|.+.++...|+ +.|.
T Consensus 139 ~g~Y~~sipl-~~a~d~~~dvlLA~~mNGepL~~~hG~PlRLVvPg~~G~rsvKwl~~I~v~~~~~~g~~~~~~yrv~p~ 217 (424)
T 2bii_A 139 NGAYGTCIRL-SWCMDPERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYFDNRVLPT 217 (424)
T ss_dssp TSSCEEEEEH-HHHTCTTTCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCCHHHHSSSBCCCT
T ss_pred CCCEEEEEEH-HHHhCCCCCEEEEEeeCCcCCCcccCCceEEEecccccCCccccCcEEEEEeccCCCceeeecccccCC
Confidence 3589998 899984 899999999999999999999874 4699999999866554 3222
Q ss_pred CCC-----------CCCCccccccccceeecCCCCCCcccc
Q psy11686 535 NGH-----------PSGYQPRATLQGARLLTRPPNPHSVRF 564 (939)
Q Consensus 535 ~~~-----------~~~~~~i~~m~V~SlI~~P~~D~dI~t 564 (939)
... .....++++|+|+|+|+.|..+..+..
T Consensus 218 ~~~~~~~~~~~~~w~~~~~~i~~l~v~S~I~~P~~~~~v~~ 258 (424)
T 2bii_A 218 MVTPEMAKSDDRWWKDERYAIYDLNLQTIICKPENQQVIKI 258 (424)
T ss_dssp TCCHHHHHHCGGGGSCGGGBCCBCCCEEEEEESCTTCEEEC
T ss_pred CCCccccccccCccccCcceecccccceEEecCCCCCEeec
Confidence 111 112357999999999999998888754
No 20
>2xts_A Sulfite dehydrogenase; oxidoreductase-electron transport complex, SOX system, sulfa oxidation, molybdenum cofactor, heme, electron transfer; HET: MTE HEC; 1.33A {Paracoccus pantotrophus}
Probab=99.90 E-value=5e-25 Score=247.91 Aligned_cols=159 Identities=19% Similarity=0.222 Sum_probs=129.7
Q ss_pred ccHHHHhhccccCcceeeccCCCCCCCccccCCCCCCCcccceeeeeeeccccHHHHHHHcCCCCCCCc---CCCCC--c
Q psy11686 403 FAEEKVRTFNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSL---DSADV--Q 477 (939)
Q Consensus 403 f~~~~l~~~p~~~~~~~l~Cagn~r~~~~~~~~~~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~~~~~~---~g~d~--~ 477 (939)
|++++|++||+++++++++|+||+|+++. .++++|.||++|+|||++|+||+|+|||++||+++++++ +|.|. -
T Consensus 101 ltl~dL~~lp~~~~~~~l~C~gn~r~~w~-~~~~~g~~w~~g~i~~~~W~GV~L~dlL~~ag~~~~a~~V~~~~~Dg~~y 179 (390)
T 2xts_A 101 FTFEDLLRFPRTTTTAFCECAANGGMEWG-GAQLEGCQYTQGMIHNMEYVGVPLSVLLAEAGVKPEGKWLYAEGADASSN 179 (390)
T ss_dssp ECHHHHTTSCCEEEEEEEECTTTTGGGTT-SCCCSSHHHHHCSEEEEEEEEEEHHHHHHHHCBCTTCCEEEEEESSTTCC
T ss_pred EcHHHHhcCCCEEEEEEEEecCCcccccc-cccccccccccCceeeeEEEEEEHHHHHHhcCCCCCceEEEEEecCCCeE
Confidence 55556667799999999999999996654 456899999999999999999999999999999998888 78886 5
Q ss_pred eeeEEeeeeeccc-----CCCCCCCCCCCCCCcceeecceee------EEEEEEecCCcCceeecCCCCC---CCCCCcc
Q psy11686 478 HVHVEIWSKAVDS-----SYNTQPESFANIWNLRGVLSNAYH------RVRVEIWSKAVDSSYNTQPENG---HPSGYQP 543 (939)
Q Consensus 478 ~~~~~~~~~a~d~-----~~Ng~pl~~~~g~p~R~vvp~~~~------~~~i~~~~~~~~~~y~~~~~~~---~~~~~~~ 543 (939)
.+++++ ++|||+ +||||||+++||||||+||||++| ..+|+|.++++.+.++...+.. ......+
T Consensus 180 ~~sipl-~~a~~~~lLA~~mNGepL~~~hG~PlRLVvPg~~G~~svKwl~~I~v~~~~~~~~~~~~~y~~~~~~~~~~~~ 258 (390)
T 2xts_A 180 GRSFPM-EKVMDDVMLAFFANGEALRKEHGYPARLVVPGWEGNMWVKWVRRLGIYDKAVESREETSKYTDLMPDGRARKW 258 (390)
T ss_dssp CEEEEH-HHHHHHCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCBSEEEEEEESSCCCCGGGTTSSCEECTTSCEEEC
T ss_pred EEEEEH-HHHhcCcEEEEeECCeECCccCCCceEEEecCccCcccceeccEEEEEecCCCCchhhccccccCCCCCcccc
Confidence 689998 899976 999999999999999999999874 4699999998855444321110 0011246
Q ss_pred ccccccceeecCCCCCCccc
Q psy11686 544 RATLQGARLLTRPPNPHSVR 563 (939)
Q Consensus 544 i~~m~V~SlI~~P~~D~dI~ 563 (939)
++.|+|||+|+.|..+..|.
T Consensus 259 ~~~~~vnS~I~~P~~~~~i~ 278 (390)
T 2xts_A 259 TWVMDAKSVITSPSPQVPIR 278 (390)
T ss_dssp CCBCCCEEEEEESBTTBCCC
T ss_pred ceeecCceeeecCCCCCEee
Confidence 78999999999998777663
No 21
>1ou5_A TRNA CCA-adding enzyme, tRNA-nucleotidyltransferase; polymerase, translation; 3.40A {Homo sapiens} SCOP: a.173.1.1 d.218.1.4
Probab=99.80 E-value=8.9e-21 Score=218.80 Aligned_cols=96 Identities=45% Similarity=0.682 Sum_probs=76.1
Q ss_pred hhhcCcchhhhc-CCCCcEEEecCCCHHHHHHHhhhcCCCceee-ee-----EEEEEcCeeeccccceecccccccCCCC
Q psy11686 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMP-IP-----FTLLFSANFFRNLARITTLRIDVTTDGR 910 (939)
Q Consensus 838 ~iVGG~VRD~LL-~~~~D~Di~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~eitt~R~e~~~~~r 910 (939)
|+|||||||.|| ++++|+||+|++.|+++.++|...++ +.++ +| +++.++|..| ||+|+|.|.|+++|
T Consensus 74 ylVGG~VRD~LLg~~~~D~Di~~~~~p~~~~~~~~~~g~-~~~~~~g~~~gt~~v~~~~~~~----ev~t~R~~~~~~~r 148 (448)
T 1ou5_A 74 RIAGGAVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGI-RMINNRGEKHGTITARLHEENF----EITTLRIDVTTDGR 148 (448)
T ss_dssp EEESTTTHHHHHTSCCSSCEEEESSCHHHHHHHHTTTTC-CBCCCCCTTCCCEEECTTTTCE----EEEECCS-------
T ss_pred EEeCHHHHHHHcCCCCCCEEEEeCCCHHHHHHHHHHcCC-ccccCcCcccceEEEEECCEEE----EEEeecccccccCC
Confidence 999999999999 89999999999999999999987663 5555 44 7778888777 99999999999999
Q ss_pred ccccccCCCHHHHhhcCCchhhhcCccC
Q psy11686 911 HAEVQFTEDWKLDANRRDLTVNSMFLGM 938 (939)
Q Consensus 911 ~~~v~~~~~l~~Dl~RRDFTINAma~~l 938 (939)
|+.|.|+.+|++||.||||||||||+|+
T Consensus 149 ~~~v~~~~~l~eDl~RRDFTINAla~~~ 176 (448)
T 1ou5_A 149 HAEVEFTTDWQKDAERRDLTINSMFLGF 176 (448)
T ss_dssp -----SSCCSSCCGGGSSBGGGSCEECS
T ss_pred CCccccCccHHHHHHHcCCChhheeECC
Confidence 9999999999999999999999999986
No 22
>1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1
Probab=99.79 E-value=3e-20 Score=164.97 Aligned_cols=79 Identities=46% Similarity=0.932 Sum_probs=69.3
Q ss_pred CCCCCcCHHHHhhccCCCCC-eEEEEcCeEeecccchhcCCCc-hHHHHhhcCCchhhhhccCCCChHHHHHHhhcCccc
Q psy11686 18 STLPWYSLSDIQNHKDLKSS-IWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIG 95 (939)
Q Consensus 18 ~~~~~~t~~ev~~h~~~~~~-~wvii~g~VYDvT~f~~~HPGG-~~il~~aG~d~~~~~~~~~~~hs~~a~~~l~~~~VG 95 (939)
++++.||++||++||+++ + |||+|+|+|||||+|++.|||| +.|+.++|+|++.|++....||+..|+++|++|+||
T Consensus 2 ~~~~~~t~~ev~~h~~~~-~~~wv~i~g~VYDvt~f~~~HPGG~~~il~~aG~Dt~~f~~~~~~~hs~~a~~~L~~~~IG 80 (82)
T 1mj4_A 2 ESTHIYTKEEVSSHTSPE-TGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHNQSHVRELLAQYKIG 80 (82)
T ss_dssp -CCCBCCCC-CTTCEETT-TEEEEEETTEEEECTTTGGGSTTCHHHHHTTTTSBSHHHHTTCGGGCSHHHHHHHHTTEEE
T ss_pred CCCCccCHHHHHHhcCCC-CCeEEEECCEEEEchHHHHhCCCHhHHHHHHcCCChHHHHhhccccCcHHHHHHHHhCcce
Confidence 456899999999999874 6 9999999999999999999999 889999999988876544568899999999999999
Q ss_pred cc
Q psy11686 96 NI 97 (939)
Q Consensus 96 ~l 97 (939)
.|
T Consensus 81 ~l 82 (82)
T 1mj4_A 81 EL 82 (82)
T ss_dssp EC
T ss_pred eC
Confidence 76
No 23
>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A*
Probab=99.79 E-value=8.3e-20 Score=165.36 Aligned_cols=84 Identities=30% Similarity=0.650 Sum_probs=75.6
Q ss_pred CCCCCCCcCHHHHhhccCCCCCeEEEEcCeEeecccchhcCCCc-hHHHHhhcCCchhhhhccCCCChHHHHHHhhcCcc
Q psy11686 16 PISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRI 94 (939)
Q Consensus 16 ~~~~~~~~t~~ev~~h~~~~~~~wvii~g~VYDvT~f~~~HPGG-~~il~~aG~d~~~~~~~~~~~hs~~a~~~l~~~~V 94 (939)
+.+.++.||++||++||+. ++|||+|+|+|||||+|+..|||| ..|+.++|+|+|..|. ..+||..|+++|++|+|
T Consensus 5 ~~~~~~~~t~~Ev~~h~~~-~~~wv~i~g~VYDvT~f~~~HPGG~~~l~~~aG~DaT~~F~--~~~Hs~~a~~~L~~~~I 81 (92)
T 3ner_A 5 VETSVTYYRLEEVAKRNSL-KELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFE--DVGHSSDAREMLKQYYI 81 (92)
T ss_dssp CCCCSCEECHHHHTTCEET-TEEEEEETTEEEECGGGTTTCTTCSHHHHTTTTSBCHHHHH--HTTCCHHHHHHHGGGEE
T ss_pred CCCCCCeeCHHHHHhhCCC-CCEEEEECCEEEEcccccccCCCHHHHHHHhcCCcchHHHH--HcCCCHHHHHHHHhCee
Confidence 5677899999999999987 599999999999999999999999 7788899998888875 35789999999999999
Q ss_pred cccCccch
Q psy11686 95 GNISQEDS 102 (939)
Q Consensus 95 G~l~~~~~ 102 (939)
|.|.+++.
T Consensus 82 G~l~~~~~ 89 (92)
T 3ner_A 82 GDIHPSDL 89 (92)
T ss_dssp EEECGGGS
T ss_pred EEEChHhc
Confidence 99988774
No 24
>3h38_A TRNA nucleotidyl transferase-related protein; transferase/RNA, nucleotide-binding, RNA-binding; 2.37A {Thermotoga maritima} PDB: 3h37_A 3h39_A* 3h3a_A*
Probab=99.78 E-value=5.9e-20 Score=210.84 Aligned_cols=95 Identities=20% Similarity=0.243 Sum_probs=78.6
Q ss_pred hhhcCcchhhhc-CCCCcEEEecCCCHHHHHHHhhhcCCCceeeee-----EEEEE-cCeeeccccceeccccccc-CCC
Q psy11686 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIP-----FTLLF-SANFFRNLARITTLRIDVT-TDG 909 (939)
Q Consensus 838 ~iVGG~VRD~LL-~~~~D~Di~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~eitt~R~e~~-~~~ 909 (939)
|+|||||||+|| ++++|+||+|++.|+++.+.+....- ..+..| +++++ +|..+ ||||+|+|.| .++
T Consensus 38 ylVGG~VRD~LLg~~~~D~Di~t~~~~~~~~~~~~~~~~-~~~~~g~~~gt~~v~~~~g~~~----ev~t~R~e~~~~~~ 112 (441)
T 3h38_A 38 YVVGGFVRDLLLGIKNLDIDIVVEGNALEFAEYAKRFLP-GKLVKHDKFMTASLFLKGGLRI----DIATARLEYYESPA 112 (441)
T ss_dssp EEETHHHHHHHHTCCCCCEEEEESSCHHHHHHHHHTTSC-EEEECCSSTTEEEEEETTSCEE----EEEECCEECCSSSS
T ss_pred EEEcHHHHHHHCCCCCCCeeEEeCCCHHHHHHHHHHHcC-CEeccCCcCcEEEEEEeCCeEE----EEecccccccCCCC
Confidence 999999999999 89999999999999988766654321 122223 78887 77888 9999999988 567
Q ss_pred CccccccCCCHHHHhhcCCchhhhcCccC
Q psy11686 910 RHAEVQFTEDWKLDANRRDLTVNSMFLGM 938 (939)
Q Consensus 910 r~~~v~~~~~l~~Dl~RRDFTINAma~~l 938 (939)
|++.|.+ .+|++||.||||||||||+++
T Consensus 113 ~~p~V~~-~~l~eDl~RRDFTINAla~~~ 140 (441)
T 3h38_A 113 KLPDVEM-STIKKDLYRRDFTINAMAIKL 140 (441)
T ss_dssp SCCEESC-CCHHHHHHTSSBGGGSCEEEC
T ss_pred CCCccCC-CCHHHHHHhccchhhhhhccc
Confidence 7777766 689999999999999999975
No 25
>1miw_A TRNA CCA-adding enzyme; tRNA nucleotidyltransferase, translation, transferase; HET: ATP; 3.00A {Geobacillus stearothermophilus} SCOP: a.173.1.1 d.218.1.4 PDB: 1miv_A* 1miy_A*
Probab=99.78 E-value=6.9e-20 Score=209.18 Aligned_cols=92 Identities=17% Similarity=0.369 Sum_probs=76.9
Q ss_pred hhhcCcchhhhc-CCCCcEEEecCCCHHHHHHHhhhcCCCceeeee-----EEEEEcCeeeccccceeccccccc-CCCC
Q psy11686 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIP-----FTLLFSANFFRNLARITTLRIDVT-TDGR 910 (939)
Q Consensus 838 ~iVGG~VRD~LL-~~~~D~Di~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~eitt~R~e~~-~~~r 910 (939)
|+|||||||+|| ++++|+||+|++.|+++.++|. +.+++| ++++.+|..+ ||||+|+|.| +++|
T Consensus 23 y~VGG~VRD~lLg~~~~D~Di~~~~~~~~~~~~~~-----~~~~~g~~~gt~~v~~~~~~~----ev~t~R~e~~~~~~~ 93 (404)
T 1miw_A 23 YFVGGAVRDLLLGRPIGDVDIATSALPEDVMAIFP-----KTIDVGSKHGTVVVVHKGKAY----EVTTFKTDGDYEDYR 93 (404)
T ss_dssp EEESHHHHHHHHTCCCCCCEEEESSCHHHHHHHCS-----SEEEEEGGGTEEEEEETTEEE----EEEECEECC------
T ss_pred EEECHHHHHHHcCCCCCCEEEEeCCCHHHHHHHhh-----hhcccCcCCCeEEEEECCeEE----EEeeecccCCCCCCc
Confidence 999999999999 8999999999999999999986 333444 7888898888 9999999977 7889
Q ss_pred cc-ccccCCCHHHHhhcCCchhhhcCccC
Q psy11686 911 HA-EVQFTEDWKLDANRRDLTVNSMFLGM 938 (939)
Q Consensus 911 ~~-~v~~~~~l~~Dl~RRDFTINAma~~l 938 (939)
|+ .|.|+.+|++||.||||||||||++.
T Consensus 94 ~p~~v~~~~~l~~Dl~RRDfTiNAla~~~ 122 (404)
T 1miw_A 94 RPESVTFVRSLEEDLKRRDFTMNAIAMDE 122 (404)
T ss_dssp ---CCEECSCHHHHHHTSSBSGGGCEECT
T ss_pred CCcccccCCcHHHHHHhCCCCcchheeCC
Confidence 97 78998999999999999999999985
No 26
>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...
Probab=99.77 E-value=2.7e-19 Score=162.54 Aligned_cols=82 Identities=32% Similarity=0.695 Sum_probs=73.4
Q ss_pred CCCCCcCHHHHhhccCCCCCeEEEEcCeEeecccchhcCCCc-hHHHHhhcCCchhhhhccCCCChHHHHHHhhcCcccc
Q psy11686 18 STLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIGN 96 (939)
Q Consensus 18 ~~~~~~t~~ev~~h~~~~~~~wvii~g~VYDvT~f~~~HPGG-~~il~~aG~d~~~~~~~~~~~hs~~a~~~l~~~~VG~ 96 (939)
+.++.||++||++||+. ++|||+|+|+|||||+|+..|||| ..|+.++|+|+|..|. ..+|+..|+++|++|+||.
T Consensus 2 ~~~~~~t~~Ev~~h~~~-~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~--~~~Hs~~a~~~L~~~~IG~ 78 (93)
T 1cyo_A 2 KAVKYYTLEEIQKHNNS-KSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFE--DVGHSTDARELSKTFIIGE 78 (93)
T ss_dssp CSCCEECHHHHTTCEET-TEEEEEETTEEEECTTTTTTCTTCSHHHHHHTTSBCHHHHH--HTTCCHHHHHHHTTTEEEE
T ss_pred CCCCccCHHHHHhhCCC-CCEEEEECCEEEECCCcchhCcChHHHHHHhcCccchHHHH--HcCCCHHHHHHHHhCeeEE
Confidence 45789999999999987 599999999999999999999999 7888999998888874 3578999999999999999
Q ss_pred cCccch
Q psy11686 97 ISQEDS 102 (939)
Q Consensus 97 l~~~~~ 102 (939)
|.+++.
T Consensus 79 l~~~~~ 84 (93)
T 1cyo_A 79 LHPDDR 84 (93)
T ss_dssp ECGGGG
T ss_pred ecCccc
Confidence 987664
No 27
>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*
Probab=99.76 E-value=4.1e-19 Score=164.26 Aligned_cols=85 Identities=32% Similarity=0.679 Sum_probs=75.0
Q ss_pred CCCCCCCCcCHHHHhhccCCCCCeEEEEcCeEeecccchhcCCCc-hHHHHhhcCCchhhhhccCCCChHHHHHHhhcCc
Q psy11686 15 EPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYR 93 (939)
Q Consensus 15 ~~~~~~~~~t~~ev~~h~~~~~~~wvii~g~VYDvT~f~~~HPGG-~~il~~aG~d~~~~~~~~~~~hs~~a~~~l~~~~ 93 (939)
.+.+.++.||++||++||+. ++|||+|+|+|||||+|+..|||| ..|+.++|+|++..|. ..+|+..|+++|++|+
T Consensus 3 ~~~~~~~~~t~~Ev~~h~~~-~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aGkDaT~~F~--~~~Hs~~a~~~L~~~~ 79 (104)
T 1hko_A 3 ESSKAVKYYTLEEIQKHNNS-KSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFE--DVGHSTDARELSKTFI 79 (104)
T ss_dssp CCCCCCEEECHHHHHHCBSS-SSBEEEETTEEEEHHHHSSSSSSCSHHHHTTCSEECHHHHT--TTTCCHHHHHHHTTTE
T ss_pred cccccCCccCHHHHHHhcCC-CCEEEEECCEEEECCcchhhCcChHHHHHHhcCccchHHHH--HcCCCHHHHHHHHcCe
Confidence 34567789999999999987 599999999999999999999999 7788899998888874 4578999999999999
Q ss_pred ccccCccch
Q psy11686 94 IGNISQEDS 102 (939)
Q Consensus 94 VG~l~~~~~ 102 (939)
||.|.+.+.
T Consensus 80 IG~l~~~~~ 88 (104)
T 1hko_A 80 IGELHPDDR 88 (104)
T ss_dssp EEEECTTSS
T ss_pred eEEECCccc
Confidence 999976654
No 28
>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}
Probab=99.75 E-value=4.2e-19 Score=159.83 Aligned_cols=82 Identities=22% Similarity=0.622 Sum_probs=72.8
Q ss_pred CCCCCCcCHHHHhhccCCCCCeEEEEcCeEeecccchhcCCCc-hHHHHhhcCCchhhhhccCCCChHHHHHHhhcCccc
Q psy11686 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIG 95 (939)
Q Consensus 17 ~~~~~~~t~~ev~~h~~~~~~~wvii~g~VYDvT~f~~~HPGG-~~il~~aG~d~~~~~~~~~~~hs~~a~~~l~~~~VG 95 (939)
.+.++.||++||++|++. ++|||+|+|+|||||+|+..|||| ..|+.++|+|+|..|. ..+|+..|+++|++|+||
T Consensus 3 ~~~~~~~t~~ev~~h~~~-~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~--~~~Hs~~a~~~L~~~~IG 79 (88)
T 2ibj_A 3 SEDVKYFTRAEVAKNNTK-DKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFE--DVGHSSDAREMMKQYKVG 79 (88)
T ss_dssp CCCCCEECHHHHHTSEET-TEEEEEETTEEEECGGGTTTCTTCSHHHHTTTTEECHHHHH--HHTCCHHHHHHHGGGEEE
T ss_pred CccCCccCHHHHHHhCCC-CCEEEEECCEEEECCcchhhCcCHHHHHHHhCCCcchHHHH--HcCCCHHHHHHHHcCceE
Confidence 346789999999999987 599999999999999999999999 6788899998888874 347899999999999999
Q ss_pred ccCccc
Q psy11686 96 NISQED 101 (939)
Q Consensus 96 ~l~~~~ 101 (939)
.|.+++
T Consensus 80 ~l~~~~ 85 (88)
T 2ibj_A 80 ELVAEE 85 (88)
T ss_dssp EECGGG
T ss_pred EeCccc
Confidence 997655
No 29
>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}
Probab=99.75 E-value=2e-19 Score=161.50 Aligned_cols=82 Identities=22% Similarity=0.456 Sum_probs=73.3
Q ss_pred CCCCCCcCHHHHhhccCCCCCeEEEEcCeEeecccchhcCCCc-hHHHHhhcCCchhhhhccCCCChHHHHHHhhcCccc
Q psy11686 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYRIG 95 (939)
Q Consensus 17 ~~~~~~~t~~ev~~h~~~~~~~wvii~g~VYDvT~f~~~HPGG-~~il~~aG~d~~~~~~~~~~~hs~~a~~~l~~~~VG 95 (939)
..+++.||++||++||+. ++|||+|+|+|||||+|++.|||| +.|+.++|+|+|..|+ ..||+..++++|++|+||
T Consensus 2 ~~~l~~~t~~Ev~~h~~~-~~~wv~i~g~VYDvT~f~~~HPGG~~~l~~~aG~DaT~~F~--~~h~~~~~~~~L~~~~IG 78 (88)
T 3lf5_A 2 KGRLIEVTEEELKKHNKK-DDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFD--QVHRWVNYESMLKECLVG 78 (88)
T ss_dssp CCSSEEECHHHHHHCEET-TEEEEEETTEEEECGGGTTTCTTCHHHHHTTTTEECHHHHH--HHHTTCCHHHHTGGGEEE
T ss_pred CCCCCEeCHHHHHhhCCC-CCEEEEECCEEEECccchhhCcChhhhhhhcCCCcchHHHH--HHCCcHHHHHHHHcCeeE
Confidence 467889999999999987 599999999999999999999999 7888899998888885 467888889999999999
Q ss_pred ccCccc
Q psy11686 96 NISQED 101 (939)
Q Consensus 96 ~l~~~~ 101 (939)
.|.+++
T Consensus 79 ~l~~~~ 84 (88)
T 3lf5_A 79 RMAIKP 84 (88)
T ss_dssp EECCCG
T ss_pred EeCCCc
Confidence 997664
No 30
>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1
Probab=99.74 E-value=1.3e-18 Score=157.24 Aligned_cols=82 Identities=28% Similarity=0.587 Sum_probs=70.3
Q ss_pred CCCCCCcCHHHHhhccCCCCCeEEEEcCeEeecccchhcCCCc-hHHHHhhcCCchhhhhc--cCCCChHHHHHHhhcCc
Q psy11686 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAM--YGVHLQDEVFELLESYR 93 (939)
Q Consensus 17 ~~~~~~~t~~ev~~h~~~~~~~wvii~g~VYDvT~f~~~HPGG-~~il~~aG~d~~~~~~~--~~~~hs~~a~~~l~~~~ 93 (939)
....+.||++||++|+++ ++|||+|+|+|||||+|+..|||| +.|+.++|+|++..|.. +..+|+..|+++|++|+
T Consensus 4 ~~~~~~~t~~Ev~~h~~~-~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~~~~~Hs~~a~~~L~~~~ 82 (90)
T 1cxy_A 4 EATLPVFTLEQVAEHHSP-DDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWCGQESTEAWETKSYGEPHSSLAARLLQRYL 82 (90)
T ss_dssp --CCCBCCHHHHTTCEET-TEEEEEETTEEEECTTTGGGCCSSTTTTGGGTTSBCHHHHHHTTTTCCCCHHHHHHHHHTE
T ss_pred cccCCCcCHHHHHHhcCC-CCEEEEECCEEEECccchhhCcChHHHHHHHCCcchhHHHhhcccccCCCHHHHHHHHhCc
Confidence 345689999999999987 599999999999999999999999 78999999988888851 24678999999999999
Q ss_pred ccccCc
Q psy11686 94 IGNISQ 99 (939)
Q Consensus 94 VG~l~~ 99 (939)
||.|++
T Consensus 83 IG~l~~ 88 (90)
T 1cxy_A 83 IGTLEE 88 (90)
T ss_dssp EEEC--
T ss_pred eeEeCC
Confidence 999864
No 31
>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4
Probab=99.72 E-value=2.1e-18 Score=196.42 Aligned_cols=94 Identities=19% Similarity=0.245 Sum_probs=68.9
Q ss_pred hhhcCcchhhhc-CCCCcEEEecCCCHHH----HHHHhhhcCCCceee-ee-EEEEEcCeeeccccceeccccccc-CCC
Q psy11686 838 KILGGSFSKEMM-LKMLEINMFPHLGTDE----TFATLDFEGLFRSMP-IP-FTLLFSANFFRNLARITTLRIDVT-TDG 909 (939)
Q Consensus 838 ~iVGG~VRD~LL-~~~~D~Di~~~~~~~~----~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~eitt~R~e~~-~~~ 909 (939)
|+|||||||.|| ++++|+||+|++.+.+ +.+.+.. . +.... .| +++.++|..+ ||||+|+|.| .++
T Consensus 14 y~VGG~VRD~llg~~~~D~Di~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~t~~v~~~~~~~----e~~~~R~e~~~~~~ 87 (390)
T 1vfg_A 14 YIVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARRHGV-N-VHPFPEFGTAHLKIGKLKL----EFATARRETYPRPG 87 (390)
T ss_dssp EEETHHHHHHHTTCCCSEEEEEESSCHHHHHHHHHHHHTC-C-CEEETTTTEEEEEETTEEE----EEEECCSCC-----
T ss_pred EEEChHHHHHHcCCCCCCEEEEEeCChHHHHHHHHHHcCC-c-eeecCCCcEEEEEECCEEE----EEeccCcccCCCCC
Confidence 999999999999 8999999999998755 3444421 1 11111 12 8888899888 9999999998 466
Q ss_pred CccccccCCCHHHHhhcCCchhhhcCccC
Q psy11686 910 RHAEVQFTEDWKLDANRRDLTVNSMFLGM 938 (939)
Q Consensus 910 r~~~v~~~~~l~~Dl~RRDFTINAma~~l 938 (939)
|++.| ...+|++||.||||||||||+++
T Consensus 88 ~~p~v-~~~~l~~Dl~RRDfTiNAla~~~ 115 (390)
T 1vfg_A 88 AYPKV-EPASLKEDLIRRDFTINAMAISV 115 (390)
T ss_dssp ----C-CCCCHHHHHHTSSBGGGSCEEEC
T ss_pred CCCcc-CCCCHHHHHhhCCCchhheeecc
Confidence 77665 45699999999999999999975
No 32
>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}
Probab=99.72 E-value=2.2e-18 Score=152.99 Aligned_cols=76 Identities=26% Similarity=0.539 Sum_probs=68.6
Q ss_pred CCCcCHHHHhhccCCCCCeEEEEcCeEeecccchhcCCCchHHHHhhcCCchhh--hhccCCC--ChHHHHHHhhcCccc
Q psy11686 20 LPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGGEIIMKAAGGSIEPF--WAMYGVH--LQDEVFELLESYRIG 95 (939)
Q Consensus 20 ~~~~t~~ev~~h~~~~~~~wvii~g~VYDvT~f~~~HPGG~~il~~aG~d~~~~--~~~~~~~--hs~~a~~~l~~~~VG 95 (939)
.+.||++||++|++. ++|||+|+|+|||||+|++.||||+.|+.++|+|+|.. |. ..| |+..|+++|++|+||
T Consensus 3 ~~~~t~~ev~~h~~~-~~~wv~i~g~VYDvT~f~~~HPGG~~i~~~aG~D~T~~~~F~--~~h~~hs~~a~~~L~~~~IG 79 (82)
T 1x3x_A 3 DKKYTKEEVAKHNTQ-NDLWIIYDGEVHDMTSFYKEHPGGKVILNKAGQDATSVLKTL--APHVKAADVVMKKLKQTCIG 79 (82)
T ss_dssp SCEECHHHHHTCEET-TEEEEEETTEEEECGGGGGGCTTGGGGGGGTTSBCHHHHHHS--HHHHHTHHHHHHHHHHHEEE
T ss_pred CCccCHHHHHhhCCC-CCEEEEECCEEEECCcchhhCcChhhhhhhCCCCCchhhhhh--cccccchHHHHHHHHhCcce
Confidence 578999999999987 49999999999999999999999977888999988887 74 457 899999999999999
Q ss_pred ccC
Q psy11686 96 NIS 98 (939)
Q Consensus 96 ~l~ 98 (939)
.|.
T Consensus 80 ~l~ 82 (82)
T 1x3x_A 80 KVK 82 (82)
T ss_dssp EEC
T ss_pred EeC
Confidence 873
No 33
>1xdy_A Bacterial sulfite oxidase; bioinformatics, sequence analysis, electron transfer, oxidoreductase, molybdoenzymes, molybdopterin; HET: MTE; 2.20A {Escherichia coli} SCOP: d.176.1.1 PDB: 1xdq_A*
Probab=99.71 E-value=3.6e-18 Score=185.02 Aligned_cols=132 Identities=14% Similarity=0.196 Sum_probs=102.4
Q ss_pred ccHHHHhh-ccccCcceeeccCCCCCCCccccCCCCCCCcccceeeeeeeccccHHHHHHHcCCCCCCCc---CCCC---
Q psy11686 403 FAEEKVRT-FNEKGEKHGTVCARMNDKENFEVKPVKGLTWGHAAVGNATWTGARLVDVLKAAGISPDQSL---DSAD--- 475 (939)
Q Consensus 403 f~~~~l~~-~p~~~~~~~l~Cagn~r~~~~~~~~~~g~~w~~gav~~a~W~Gv~L~~vL~~~gv~~~~~~---~g~d--- 475 (939)
|++++|++ ||+++++++++|+++ |+ +|+.|+||+|+|||++||++++|++ +|.|
T Consensus 82 ltl~dL~~~lP~~e~~~~l~Cv~~---------------Ws----~~~~W~GV~L~dLL~~aG~~~~A~~V~f~~~dd~~ 142 (298)
T 1xdy_A 82 LDHDDLTRRFPLEERIYRMRCVEA---------------WS----MVVPWIGFPLHKLLALAEPTSNAKYVAFETIYAPE 142 (298)
T ss_dssp EEHHHHHHTSCCEEEEEEEEETTT---------------EE----EEEEEEEEEHHHHHHHHCBCTTCCEEEEEECCCTT
T ss_pred eeHHHHhccCCCeEEEEEEEecCC---------------Cc----ceeEEEeEEHHHHHHHcCCCCCCeEEEEEeCCChh
Confidence 55556665 789999999999973 65 3899999999999999999998877 5653
Q ss_pred ----------------CceeeEEeeeeeccc------CCCCCCCCCCCCCCcceeecceee------EEEEEEecCCcCc
Q psy11686 476 ----------------VQHVHVEIWSKAVDS------SYNTQPESFANIWNLRGVLSNAYH------RVRVEIWSKAVDS 527 (939)
Q Consensus 476 ----------------~~~~~~~~~~~a~d~------~~Ng~pl~~~~g~p~R~vvp~~~~------~~~i~~~~~~~~~ 527 (939)
.-..++++ ++||++ +||||||+++||+|+|+||||++| ..+|+|.+++..+
T Consensus 143 ~~~G~~~~~~~~~~~~~Y~~slpl-~~a~~~~~lLA~~mNGepLp~~hG~PlRLVVPg~yG~ksvKwl~~Iev~~~~~~g 221 (298)
T 1xdy_A 143 QMPGQQDRFIGGGLKYPYVEGLRL-DEAMHPLTLMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPT 221 (298)
T ss_dssp TCGGGTCTTTTTTCCSSCEEEEEH-HHHHSTTCEEEEEETTEECCGGGTCSCEEECTTBCGGGSCCSEEEEEEESSCCCC
T ss_pred cccCccccccccccCCCeEEEEEH-HHhcCCCEEEEEeeCCeECCcccCCceEEEeCCccccCcceeccEEEEEeCCCCC
Confidence 12367887 899987 999999999999999999999874 4699999998865
Q ss_pred eeecC-------CCCCCCCCCccccccccceeec
Q psy11686 528 SYNTQ-------PENGHPSGYQPRATLQGARLLT 554 (939)
Q Consensus 528 ~y~~~-------~~~~~~~~~~~i~~m~V~SlI~ 554 (939)
.|+.. ..+..+....|.|.|++.++|+
T Consensus 222 ~We~~~y~~yg~~~n~n~~v~~P~w~q~~er~i~ 255 (298)
T 1xdy_A 222 TWNLAAPDEYGFYANVNPYVDHPRWSQATERFIG 255 (298)
T ss_dssp HHHHHCTTTCCSSCBCCTTSCBTTBCCSEEEECC
T ss_pred chhhcCccccCcccCCCCCCCCCcccccceeEEc
Confidence 55431 1112233445777777777776
No 34
>3aql_A Poly(A) polymerase; transferase/RNA, ATP-binding, nucleotide-binding, RNA-bindin transferase, nucleotidyltransferase, ATP binding, A-phospho; 3.00A {Escherichia coli} PDB: 3aqn_A* 3aqk_A 3aqm_A
Probab=99.71 E-value=4.5e-18 Score=194.53 Aligned_cols=95 Identities=18% Similarity=0.293 Sum_probs=71.3
Q ss_pred hhhcCcchhhhc-CCCCcEEEecCCCHHHHHHHhhhcCCCceeeee-EEEEEcCeeeccccceecccccccC--------
Q psy11686 838 KILGGSFSKEMM-LKMLEINMFPHLGTDETFATLDFEGLFRSMPIP-FTLLFSANFFRNLARITTLRIDVTT-------- 907 (939)
Q Consensus 838 ~iVGG~VRD~LL-~~~~D~Di~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~eitt~R~e~~~-------- 907 (939)
|+|||||||+|| ++++|+||+|++.|+++.++|.....+. ...+ +++.+++..+ ||+|||.+.|.
T Consensus 36 ylVGG~VRD~LLg~~~~D~Di~t~a~p~~~~~~f~~~~~~g-~~f~~~~v~~~~~~~----ev~t~R~~~~~~~~~~~~~ 110 (415)
T 3aql_A 36 WLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVG-RRFRLAHVMFGPEII----EVATFRGHHEGNVSDRTTS 110 (415)
T ss_dssp EEETHHHHHHHHSSCCSCCEEEESSCHHHHHHHTTTSCCCC-CSSSCCEEESSSCEE----EEEECCC------------
T ss_pred EEECHHHHHHHcCCCCCCEEEEcCCCHHHHHHHhhhCeEec-ccCCEEEEEECCcEE----EEeeecccccccccccccc
Confidence 999999999999 8999999999999999999996443210 1112 6777888877 99999998652
Q ss_pred ----CCCcc-ccccCCCHHHHhhcCCchhhhcCccC
Q psy11686 908 ----DGRHA-EVQFTEDWKLDANRRDLTVNSMFLGM 938 (939)
Q Consensus 908 ----~~r~~-~v~~~~~l~~Dl~RRDFTINAma~~l 938 (939)
++|+. .+.|+ +|++||.||||||||||||+
T Consensus 111 ~~~~~g~~~~~~~~~-tl~eDl~RRDFTINAla~~~ 145 (415)
T 3aql_A 111 QRGQNGMLLRDNIFG-SIEEDAQRRDFTINSLYYSV 145 (415)
T ss_dssp -----------CCCC-CHHHHHTTSSBSGGGCEEET
T ss_pred cccCCCcccccccCC-CHHHHHhcCCccceeEEEeC
Confidence 23332 23454 89999999999999999986
No 35
>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens}
Probab=99.68 E-value=1.2e-18 Score=162.86 Aligned_cols=85 Identities=19% Similarity=0.325 Sum_probs=73.0
Q ss_pred CCCCCCCCcCHHHHhhccCCCCCeEEEEcCeEeecccchhcCCCc-hHHHHhhcCCchhhhhccCCCChHHHHHHhhcCc
Q psy11686 15 EPISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHLQDEVFELLESYR 93 (939)
Q Consensus 15 ~~~~~~~~~t~~ev~~h~~~~~~~wvii~g~VYDvT~f~~~HPGG-~~il~~aG~d~~~~~~~~~~~hs~~a~~~l~~~~ 93 (939)
++.+..+.||++||++|++. ++|||+|+|+|||||+|+..|||| +.|+.++|+|+|..|. ..+|+..|+++|++|+
T Consensus 18 ~m~~~~~~~t~~Ev~~h~~~-~d~wvvi~G~VYDVT~fl~~HPGG~~~l~~~aGkDaT~~F~--~~~Hs~~a~~~L~~~~ 94 (112)
T 2keo_A 18 GNNEKVTLVRIADLENHNND-GGFWTVIDGKVYDIKDFQTQSLTENSILAQFAGEDPVVALE--AALQFEDTRESMHAFC 94 (112)
T ss_dssp ---CCCCEECHHHHHHHHHH-TCCEEEETTEEEEHHHHHHHHTSTTSTTGGGTTSCHHHHHH--HHHHSTTGGGTHHHHE
T ss_pred cCCCCCCccCHHHHHHhcCC-CCEEEEECCEEEECCcchhhCCCchhhhhhhCCccchHHHh--HcCCCHHHHHHHHhCc
Confidence 34556789999999999986 599999999999999999999999 7889999998888875 3357888999999999
Q ss_pred ccccCccch
Q psy11686 94 IGNISQEDS 102 (939)
Q Consensus 94 VG~l~~~~~ 102 (939)
||.|.++++
T Consensus 95 IG~l~~~e~ 103 (112)
T 2keo_A 95 VGQYLEPDQ 103 (112)
T ss_dssp EEEECCHHH
T ss_pred eEeeCCccc
Confidence 999986654
No 36
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.39 E-value=1.8e-13 Score=160.37 Aligned_cols=83 Identities=23% Similarity=0.441 Sum_probs=69.3
Q ss_pred CCCCCCcCHHHHhhccCCCCCeEEEEcCeEeecccchhcCCCc-hHHHHhhcCCchhhhhccCCCChHHHHHHh-hcCcc
Q psy11686 17 ISTLPWYSLSDIQNHKDLKSSIWVVFRQGVYDITEFVQMHPGG-EIIMKAAGGSIEPFWAMYGVHLQDEVFELL-ESYRI 94 (939)
Q Consensus 17 ~~~~~~~t~~ev~~h~~~~~~~wvii~g~VYDvT~f~~~HPGG-~~il~~aG~d~~~~~~~~~~~hs~~a~~~l-~~~~V 94 (939)
....+.||++||++||+. ++|||+|+|+|||||+|++.|||| +.|+.++|+|+|..|+. .|++..+.++| ++|+|
T Consensus 5 ~~~~~~~t~~ev~~h~~~-~~~wv~i~g~VYDvt~f~~~HPGG~~~i~~~aG~DaT~~f~~--~H~~~~~~~~l~~~~~i 81 (511)
T 1kbi_A 5 DMNKQKISPAEVAKHNKP-DDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEP--LHAPNVIDKYIAPEKKL 81 (511)
T ss_dssp CSCSCCBCTTHHHHCEET-TEEEEEETTEEEECTTTGGGCTTCHHHHHTTTTSBCHHHHGG--GSCTTHHHHHSCGGGEE
T ss_pred CCCCCccCHHHHHHhCCC-CCEEEEECCEEEECCcchhhCcChHHHHHHHcCcchhhhhhh--cCCHHHHHHhhccccEE
Confidence 355689999999999987 599999999999999999999999 78889999988888753 45555455555 78999
Q ss_pred cccCccch
Q psy11686 95 GNISQEDS 102 (939)
Q Consensus 95 G~l~~~~~ 102 (939)
|.|++++.
T Consensus 82 G~l~~~~~ 89 (511)
T 1kbi_A 82 GPLQGSMP 89 (511)
T ss_dssp EEBCSCCC
T ss_pred EEecCCcc
Confidence 99987664
No 37
>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A
Probab=99.08 E-value=5e-11 Score=109.65 Aligned_cols=54 Identities=17% Similarity=0.252 Sum_probs=46.8
Q ss_pred CCcCHHHHhhccCCC--CCeEEEEcCeEeecccchh-cCCCchHHHHhhcCCchhhhh
Q psy11686 21 PWYSLSDIQNHKDLK--SSIWVVFRQGVYDITEFVQ-MHPGGEIIMKAAGGSIEPFWA 75 (939)
Q Consensus 21 ~~~t~~ev~~h~~~~--~~~wvii~g~VYDvT~f~~-~HPGG~~il~~aG~d~~~~~~ 75 (939)
+.||++||++||..+ .+|||+|+|+|||||+|.. +||||.. ..+||+|+|..|.
T Consensus 3 ~~~T~~El~~~ng~~~~~~~~vaI~G~VYDVT~~~~~~hPGG~~-~~~AG~DaT~~f~ 59 (102)
T 1j03_A 3 MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDY-SMFAGKDASRALG 59 (102)
T ss_dssp CCCCHHHHTTCBSCSSSCCBEEEETTEEEECGGGHHHHSSSSTT-TTTTTSBCHHHHH
T ss_pred cccCHHHHHHhcCCCCCCCEEEEECCEEEECCCCccccCCCCcc-cccccchHHHHHH
Confidence 579999999999763 2799999999999999987 8999973 5899998887774
No 38
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=98.08 E-value=3.6e-06 Score=76.79 Aligned_cols=75 Identities=16% Similarity=0.049 Sum_probs=61.3
Q ss_pred EEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeeeCCCCCCCCCCCceeEEEeEEEeecCCCCce
Q psy11686 294 AICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVDPKTKE 373 (939)
Q Consensus 294 ~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l~~~~~~~~~~~~~~W~~W~~~~~~~~~~~~ 373 (939)
.|+.|.+|+.+.. ++.++|.+-||+..| .|.+|||.+||+.-. ..+|..|++.|+..+|.+.
T Consensus 3 sItsP~~ga~v~~-g~~v~i~a~A~D~dg-~V~kVef~vdg~~vg----------------~dt~apy~~~w~~~~G~ht 64 (98)
T 3pe9_A 3 KLTAPKSNVVAYG-NEFLKITATASDSDG-KISRVDFLVDGEVIG----------------SDREAPYEYEWKAVEGNHE 64 (98)
T ss_dssp EEEECCTTCCEET-TSEEEEEEEECCSSS-CEEEEEEEETTEEEE----------------EECSSSEEEEEECCSEEEE
T ss_pred EEeeCCCcCEEcC-CCEEEEEEEEEeCCC-CEEEEEEEECCEEec----------------ccccCCEEEEEEcCCccEE
Confidence 4889999999986 678999999998755 699999999996321 2367889999998766664
Q ss_pred --eeeeecccCCCCC
Q psy11686 374 --VSIMDMLMGKKPH 386 (939)
Q Consensus 374 --vra~d~~~~~~p~ 386 (939)
+||.|..++.+.+
T Consensus 65 l~a~AtD~~G~~~tS 79 (98)
T 3pe9_A 65 ISVIAYDDDDAASTP 79 (98)
T ss_dssp EEEEEEETTCCBCCC
T ss_pred EEEEEEECCCCEEee
Confidence 8999999997754
No 39
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=93.67 E-value=0.052 Score=55.17 Aligned_cols=74 Identities=9% Similarity=0.015 Sum_probs=54.5
Q ss_pred EEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeeeCCCCCCCCCCCceeEEEeEEEeecC-CCCc
Q psy11686 294 AICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVD-PKTK 372 (939)
Q Consensus 294 ~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l~~~~~~~~~~~~~~W~~W~~~~~~~-~~~~ 372 (939)
.|+.|.+|+.+.. +..++|.+-|+ ..+ +|.+|||.+||.. + + .-.|..|++.|... .|.+
T Consensus 3 ~ItsP~~g~~~~~-g~~vtv~~~As-~d~-~V~~Ve~~~dg~~------v-~---------~~t~~~ys~~~~~~~~G~h 63 (190)
T 3pdd_A 3 TIDSPVAGERFEA-GKDINISATVK-SKT-PVSKVEFYNGDTL------I-S---------SDTTAPYTAKITGAAVGAY 63 (190)
T ss_dssp EEEESCTTCEEET-TSCEEEEEEEC-CSS-CEEEEEEEETTEE------E-E---------EECSSSEEEEECSCCSEEE
T ss_pred EEecCCCCCEEcC-CCeEEEEEEEe-CCC-CEEEEEEEECCEE------E-c---------cccCCceEEEeccCCCccE
Confidence 4889999999974 45899999998 434 7999999999842 1 1 11345577788754 4555
Q ss_pred e--eeeeecccCCCCC
Q psy11686 373 E--VSIMDMLMGKKPH 386 (939)
Q Consensus 373 ~--vra~d~~~~~~p~ 386 (939)
. +||+|..++.+..
T Consensus 64 tlta~A~D~aGn~s~s 79 (190)
T 3pdd_A 64 NLKAVAVLSDGRRIES 79 (190)
T ss_dssp EEEEEEEETTSCEEEC
T ss_pred EEEEEEEECCCCEeee
Confidence 3 8999999998654
No 40
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=87.80 E-value=1.3 Score=44.68 Aligned_cols=78 Identities=15% Similarity=0.065 Sum_probs=54.8
Q ss_pred cceEEEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeeeCCCCCCCCCCCceeEEEeEEEeecCC
Q psy11686 290 PVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTGQDSQAPLTRHWGWTLWRATIPVDP 369 (939)
Q Consensus 290 ~v~S~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l~~~~~~~~~~~~~~W~~W~~~~~~~~ 369 (939)
++.-.|+.|..|..+.. ++.++|.+-|-...| .|.+|||.+||..-- . . ....|++.|..+.
T Consensus 91 ~Ptv~itsP~~g~~~~~-~~~vtl~~~AsD~~g-~V~~Ve~~~dg~~v~---t---~----------t~~~y~~~~~~~~ 152 (190)
T 3pdd_A 91 KPTVKLTAPKSNVVAYG-NEFLKITATASDSDG-KISRVDFLVDGEVIG---S---D----------REAPYEYEWKAVE 152 (190)
T ss_dssp CCEEEEEECCTTCCCBT-TSEEEEEEEEECSSS-CEEEEEEEETTEEEE---E---E----------CSSSEEEEEECCS
T ss_pred CCceeecCCCCCcEEec-CCeEEEEEEEECCCC-cEEEEEEEECCEEEe---c---c----------cCCCEEEEEecCC
Confidence 34456889999988764 578999999976544 599999999984211 1 0 1123566777655
Q ss_pred CCce--eeeeecccCCCC
Q psy11686 370 KTKE--VSIMDMLMGKKP 385 (939)
Q Consensus 370 ~~~~--vra~d~~~~~~p 385 (939)
|.+. ++|+|..++...
T Consensus 153 G~~tl~a~A~D~aGn~s~ 170 (190)
T 3pdd_A 153 GNHEISVIAYDDDDAAST 170 (190)
T ss_dssp EEEEEEEEEEETTCCBCC
T ss_pred eeEEEEEEEEECCCCEEe
Confidence 5553 899999998754
No 41
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=32.61 E-value=45 Score=38.81 Aligned_cols=63 Identities=13% Similarity=0.166 Sum_probs=43.0
Q ss_pred cCCCCCCcccc----cceEEEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeee
Q psy11686 279 DFAKSPAIQEL----PVISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANF 343 (939)
Q Consensus 279 ~~~~~~~i~~~----~v~S~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l 343 (939)
.|.+...|... ....++..|..|-.+. +|++.+-.++....|.....+-+|-|+|+||+....
T Consensus 304 TWs~p~~l~~~~~~~~~~~~~~g~G~GI~l~--dGrLv~P~~~~~~~g~~~s~i~~S~D~G~TW~~~~~ 370 (523)
T 4fj6_A 304 TWSEPINITSQVKDPSWYFLLQGPGRGITMQ--DGTLVFPIQFIDATRVPNAGIMYSKDRGKTWHLHNL 370 (523)
T ss_dssp SCCCCEECHHHHCCTTCSEEEECSEECEECT--TSCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCC
T ss_pred cCCCCeeecccccCCcceEEecCCCcceEEe--CCeEEEEEEEEcCCCCEEEEEEEECCCCCeEEECCC
Confidence 46554444322 1234566666665544 788888888877666678899999999999997643
No 42
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=24.95 E-value=75 Score=37.91 Aligned_cols=53 Identities=9% Similarity=0.044 Sum_probs=40.7
Q ss_pred ceEEEEecCCCCeeccCCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeeeCC
Q psy11686 291 VISAICLPVADAKLKLENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFTG 345 (939)
Q Consensus 291 v~S~I~~P~~~~~~~~~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l~~ 345 (939)
....|..|..|-+++ +|++.+--++....|+.+.-+-.|-|+|+||+......
T Consensus 186 ~~~~~~GgGsGI~m~--dGtLVfPv~~~~~~g~~~s~iiySdD~G~TW~ls~~~~ 238 (648)
T 1ms9_A 186 TNQFLGGAGVAIVAS--NGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRS 238 (648)
T ss_dssp EEEEEECSEECEECT--TSCEEEEEEEEETTCCEEEEEEEESSTTSSCEECSCCC
T ss_pred eEEEEecCCceEEec--CCcEEEEEEEEcccccceeeEEEecCCCCCEEECCCCC
Confidence 456777777775554 78888888887665677888999999999999876543
No 43
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=24.25 E-value=90 Score=38.13 Aligned_cols=54 Identities=15% Similarity=0.004 Sum_probs=40.0
Q ss_pred cceEEEEecCCCCeecc-------CCcEEEEEEEEEcCCCCceEEEEEEeCCCCCeEEeeeC
Q psy11686 290 PVISAICLPVADAKLKL-------ENHQMEVQGYAWSGGGKAIVRVDVTIDQGRTWHVANFT 344 (939)
Q Consensus 290 ~v~S~I~~P~~~~~~~~-------~~~~~~i~G~A~~g~g~~I~rVevS~DgG~tW~~A~l~ 344 (939)
.+++++..|.+|-.++. .+|++.+-.++..+ +..-..+.+|-|+|+||+.....
T Consensus 540 g~~~~~~GPG~GIql~~~p~~~g~~dGRLV~P~~~~~~-~~~~s~~~ySdD~GkTW~~g~~i 600 (781)
T 1w0p_A 540 GNASVNPGPGHGITLTRQQNISGSQNGRLIYPAIVLDR-FFLNVMSIYSDDGGSNWQTGSTL 600 (781)
T ss_dssp SCSEEECCSSCCEECCCCTTSTTCCTTCEEEEEEEESS-SCEEEEEEEESSSSSSCEECCCC
T ss_pred ccceeecCCCceEEEeeccccCcCCCCeEEEEEEEeCC-CCcEEEEEEECCCCCcccccccc
Confidence 45677788888866551 15888888888765 33456789999999999987664
No 44
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=23.22 E-value=1.1e+02 Score=33.55 Aligned_cols=36 Identities=14% Similarity=0.280 Sum_probs=26.0
Q ss_pred CcEEEEEEEEEcCC-CCceEEEEEEeCCCCCeEEeee
Q psy11686 308 NHQMEVQGYAWSGG-GKAIVRVDVTIDQGRTWHVANF 343 (939)
Q Consensus 308 ~~~~~i~G~A~~g~-g~~I~rVevS~DgG~tW~~A~l 343 (939)
+|++-+.|.+|... ...-..|..|.|+|+||+....
T Consensus 97 ~G~ll~~~~~~~~d~~~~~~~v~~S~D~G~TW~~~~~ 133 (355)
T 3a72_A 97 KGTLLLAGSSIPTDLSSTDIVLYASQDDGMTWDFVSH 133 (355)
T ss_dssp TTCEEEEEEECCTTCCCEEEEEEEESSTTSCCEEEEE
T ss_pred CCcEEEEEeeecCCCCCceEEEEEECCCCccCccCcc
Confidence 56777777777431 1234579999999999998765
No 45
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=21.97 E-value=1.2e+02 Score=33.33 Aligned_cols=20 Identities=20% Similarity=0.408 Sum_probs=16.3
Q ss_pred ceEEEEEEeCCCCCeEEeee
Q psy11686 324 AIVRVDVTIDQGRTWHVANF 343 (939)
Q Consensus 324 ~I~rVevS~DgG~tW~~A~l 343 (939)
..-.|..|.|+|+||.....
T Consensus 50 ~~~~v~rS~DgG~TW~~~~~ 69 (355)
T 3a72_A 50 VYFPIYRSKDHGKTWNEISR 69 (355)
T ss_dssp CCEEEEEESSTTSCCEEEEE
T ss_pred ceEEEEEEcCCCcCcCCCcc
Confidence 45578999999999999644
No 46
>2fcl_A Hypothetical protein TM1012; putative nucleotidyltransferase, structural genomics, joint for structural genomics, JCSG; HET: MLY; 1.20A {Thermotoga maritima} SCOP: d.218.1.11 PDB: 2ewr_A
Probab=20.81 E-value=56 Score=32.06 Aligned_cols=57 Identities=19% Similarity=0.170 Sum_probs=33.4
Q ss_pred hhHHHHhhhhccccccccchhhHHHHhhhhcCcchhhhc---CCCCcEEEecCC-CHHHHHHHhhhcC
Q psy11686 811 EEVLSAIKKNLDGLHNISGERIWTELNKILGGSFSKEMM---LKMLEINMFPHL-GTDETFATLDFEG 874 (939)
Q Consensus 811 ~~ll~ai~~i~~~L~~l~~eri~~~L~~iVGG~VRD~LL---~~~~D~Di~~~~-~~~~~~~~~~~~~ 874 (939)
+.+..+++.+.+.|.+...+ |.+||..--++- ..++||||.+.. ..+.+.+.|...+
T Consensus 16 ~~~~~~L~~i~~~L~~~~V~-------~~l~Gs~Al~~~G~~~~~~DIDi~i~~~da~~~~~~L~~~g 76 (169)
T 2fcl_A 16 PEYLRVLRXIYDRLXNEXVN-------WVVTGSLSFALQGVPVEVHDIDIQTDEEGAYEIERIFSEFV 76 (169)
T ss_dssp HHHHHHHHHHHHHHTTSSCC-------EEEEHHHHHHHTTCCCCCCSEEEEECHHHHHHHHHHTGGGE
T ss_pred HHHHHHHHHHHHHHHhcCCC-------EEEeHHHHHHHcCCCCCCCccEEEecccCHHHHHHHHHHHh
Confidence 45666666666655443333 555555544444 578999999864 3334555555444
No 47
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=20.73 E-value=1.3e+02 Score=33.20 Aligned_cols=20 Identities=20% Similarity=0.345 Sum_probs=16.3
Q ss_pred ceEEEEEEeCCCCCeEEeee
Q psy11686 324 AIVRVDVTIDQGRTWHVANF 343 (939)
Q Consensus 324 ~I~rVevS~DgG~tW~~A~l 343 (939)
..-.|..|.|+|+||+....
T Consensus 55 ~~~~v~rS~DgG~TW~~~~~ 74 (367)
T 2ydt_A 55 VWFPIVKSKDGGKTWKEISK 74 (367)
T ss_dssp CCEEEEEESSTTSSCEEEEE
T ss_pred eEEEEEEECCCCcCcCcCcc
Confidence 35578899999999999643
No 48
>1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A*
Probab=20.32 E-value=1.3e+02 Score=32.69 Aligned_cols=49 Identities=22% Similarity=0.299 Sum_probs=31.4
Q ss_pred EEEEecCCCCeeccCC--cEEEEEEEEEcCC-----CCceEEEEEEeCCCCCeEEeee
Q psy11686 293 SAICLPVADAKLKLEN--HQMEVQGYAWSGG-----GKAIVRVDVTIDQGRTWHVANF 343 (939)
Q Consensus 293 S~I~~P~~~~~~~~~~--~~~~i~G~A~~g~-----g~~I~rVevS~DgG~tW~~A~l 343 (939)
..+..|..+-.+. + |++.+-.++.... +.....|-.|.|+|+||+....
T Consensus 158 ~~~~~pg~gi~l~--~~~G~lv~p~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~ 213 (382)
T 1so7_A 158 TFAVGPGHCLQLN--DRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHF 213 (382)
T ss_dssp EEEECSSCCEECC--STTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTTSSCEECCC
T ss_pred eeccCCCcEeecc--cCCCcEEEEEEEecccccccCCCceeEEEEECCCCceeEcCcc
Confidence 4555665553333 4 6776655555321 2346778899999999998764
Done!