Query psy11688
Match_columns 546
No_of_seqs 674 out of 5033
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 16:21:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11688.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11688hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wao_1 Serine/threonine protei 100.0 6E-78 2E-82 645.8 32.7 411 32-442 3-466 (477)
2 3h63_A Serine/threonine-protei 100.0 4.4E-71 1.5E-75 548.9 26.1 299 144-442 15-313 (315)
3 3icf_A PPT, serine/threonine-p 100.0 7.3E-70 2.5E-74 543.9 25.2 298 145-442 17-327 (335)
4 3ll8_A Serine/threonine-protei 100.0 4.5E-67 1.5E-71 524.9 28.7 303 144-454 29-346 (357)
5 3e7a_A PP-1A, serine/threonine 100.0 3E-66 1E-70 510.6 26.3 269 157-432 28-297 (299)
6 1aui_A Calcineurin, serine/thr 100.0 6.9E-63 2.4E-67 512.0 27.7 291 145-443 43-347 (521)
7 2ie4_C PP2A-alpha;, serine/thr 100.0 3.4E-62 1.2E-66 487.5 25.1 283 147-436 12-295 (309)
8 1fjm_A Protein serine/threonin 100.0 1E-60 3.4E-65 479.5 26.4 272 157-435 29-301 (330)
9 2z72_A Protein-tyrosine-phosph 100.0 8.7E-36 3E-40 303.8 7.9 221 188-420 70-320 (342)
10 2dfj_A Diadenosinetetraphospha 99.9 3.9E-29 1.3E-33 247.1 2.8 195 190-392 2-211 (280)
11 1wao_1 Serine/threonine protei 99.9 3E-23 1E-27 221.7 10.5 85 68-152 6-90 (477)
12 4gco_A Protein STI-1; structur 99.8 2.2E-20 7.5E-25 162.3 14.4 118 29-146 7-125 (126)
13 2qjc_A Diadenosine tetraphosph 99.8 7.7E-21 2.6E-25 186.4 3.2 209 174-418 8-236 (262)
14 3h63_A Serine/threonine-protei 99.8 1E-19 3.5E-24 180.5 7.6 81 461-543 64-149 (315)
15 3e7a_A PP-1A, serine/threonine 99.8 7.4E-20 2.5E-24 180.2 2.9 91 451-543 50-144 (299)
16 3ll8_A Serine/threonine-protei 99.8 1.2E-19 4.1E-24 181.8 3.0 85 457-543 70-158 (357)
17 2hr2_A Hypothetical protein; a 99.7 9.4E-18 3.2E-22 149.9 12.4 121 31-151 7-151 (159)
18 4gyw_A UDP-N-acetylglucosamine 99.7 1.1E-17 3.8E-22 186.5 15.6 171 30-211 4-175 (723)
19 1g5b_A Serine/threonine protei 99.7 7E-18 2.4E-22 161.3 11.3 161 186-385 10-190 (221)
20 3icf_A PPT, serine/threonine-p 99.7 6.2E-19 2.1E-23 176.1 2.6 82 459-542 66-152 (335)
21 1fjm_A Protein serine/threonin 99.7 8E-19 2.7E-23 175.8 2.9 86 456-543 56-145 (330)
22 3gyz_A Chaperone protein IPGC; 99.7 4.5E-17 1.6E-21 146.0 13.8 112 25-136 26-138 (151)
23 1aui_A Calcineurin, serine/thr 99.7 1.6E-18 5.3E-23 180.3 3.0 82 459-542 85-170 (521)
24 2pl2_A Hypothetical conserved 99.7 1.5E-17 5.2E-22 158.1 9.6 168 32-211 2-181 (217)
25 3upv_A Heat shock protein STI1 99.7 6.6E-17 2.3E-21 139.2 12.5 116 32-147 1-123 (126)
26 3rkv_A Putative peptidylprolyl 99.7 6E-17 2.1E-21 146.1 12.0 124 29-152 5-148 (162)
27 4ga2_A E3 SUMO-protein ligase 99.7 6.2E-17 2.1E-21 144.7 12.0 120 28-147 24-145 (150)
28 4gcn_A Protein STI-1; structur 99.7 9.3E-17 3.2E-21 139.3 12.4 106 29-134 2-115 (127)
29 2ie4_C PP2A-alpha;, serine/thr 99.7 6.6E-18 2.3E-22 168.1 4.6 87 455-543 48-138 (309)
30 2xcb_A PCRH, regulatory protei 99.7 3.2E-16 1.1E-20 138.4 14.2 125 26-150 9-134 (142)
31 2vgx_A Chaperone SYCD; alterna 99.7 3.2E-16 1.1E-20 139.8 13.6 122 26-147 12-134 (148)
32 2h6f_A Protein farnesyltransfe 99.7 1.4E-16 4.9E-21 164.9 12.9 204 27-243 89-302 (382)
33 3vtx_A MAMA; tetratricopeptide 99.7 5.9E-16 2E-20 142.1 14.5 167 33-210 3-170 (184)
34 3sz7_A HSC70 cochaperone (SGT) 99.7 6.5E-16 2.2E-20 139.6 14.3 113 29-141 5-118 (164)
35 2pl2_A Hypothetical conserved 99.7 2.7E-16 9.2E-21 149.5 11.8 161 29-201 33-205 (217)
36 2h6f_A Protein farnesyltransfe 99.7 1.2E-16 4E-21 165.5 8.3 152 28-184 124-277 (382)
37 3urz_A Uncharacterized protein 99.6 4.7E-15 1.6E-19 139.8 15.7 117 34-150 3-136 (208)
38 1p5q_A FKBP52, FK506-binding p 99.6 5E-15 1.7E-19 150.6 16.6 128 27-154 139-282 (336)
39 4i17_A Hypothetical protein; T 99.6 6.1E-15 2.1E-19 140.3 14.5 134 35-179 7-149 (228)
40 2fbn_A 70 kDa peptidylprolyl i 99.6 7.6E-15 2.6E-19 136.8 14.4 130 24-153 27-173 (198)
41 2vyi_A SGTA protein; chaperone 99.6 1.5E-14 5E-19 123.4 14.6 125 27-151 4-129 (131)
42 2ho1_A Type 4 fimbrial biogene 99.6 3.6E-15 1.2E-19 143.5 11.9 208 28-248 29-240 (252)
43 2lni_A Stress-induced-phosphop 99.6 5.2E-15 1.8E-19 127.1 11.7 120 29-148 10-130 (133)
44 4ga2_A E3 SUMO-protein ligase 99.6 4E-16 1.4E-20 139.4 4.7 112 41-152 3-115 (150)
45 4gyw_A UDP-N-acetylglucosamine 99.6 3.2E-15 1.1E-19 166.6 12.9 127 28-154 36-163 (723)
46 2dba_A Smooth muscle cell asso 99.6 9.3E-15 3.2E-19 128.1 13.1 121 26-146 19-143 (148)
47 1hxi_A PEX5, peroxisome target 99.6 1.2E-14 4E-19 124.9 13.0 101 37-137 19-120 (121)
48 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 9.1E-15 3.1E-19 155.1 14.9 127 27-153 260-402 (457)
49 2vq2_A PILW, putative fimbrial 99.6 1.1E-14 3.6E-19 136.8 12.6 208 30-249 3-214 (225)
50 3q49_B STIP1 homology and U bo 99.6 8.4E-15 2.9E-19 127.2 11.0 104 31-134 5-109 (137)
51 2y4t_A DNAJ homolog subfamily 99.6 1.7E-14 6E-19 150.9 14.0 224 24-249 15-243 (450)
52 3vtx_A MAMA; tetratricopeptide 99.6 3.5E-14 1.2E-18 130.1 14.0 141 28-179 32-173 (184)
53 1a17_A Serine/threonine protei 99.6 1.4E-13 4.6E-18 123.1 17.4 117 29-145 7-124 (166)
54 1elw_A TPR1-domain of HOP; HOP 99.5 7.8E-14 2.7E-18 116.6 14.3 113 34-146 3-116 (118)
55 2q7f_A YRRB protein; TPR, prot 99.5 6.6E-15 2.2E-19 140.3 7.8 167 33-210 21-188 (243)
56 1w3b_A UDP-N-acetylglucosamine 99.5 1.4E-14 4.9E-19 149.0 10.8 217 30-248 28-268 (388)
57 1w3b_A UDP-N-acetylglucosamine 99.5 2.6E-14 8.8E-19 147.1 11.8 217 31-249 97-337 (388)
58 2if4_A ATFKBP42; FKBP-like, al 99.5 2.2E-14 7.5E-19 146.0 10.9 124 26-149 170-311 (338)
59 4i17_A Hypothetical protein; T 99.5 9.7E-14 3.3E-18 131.9 14.6 119 34-152 41-169 (228)
60 1ihg_A Cyclophilin 40; ppiase 99.5 4.4E-14 1.5E-18 145.6 13.0 125 29-153 217-358 (370)
61 3qky_A Outer membrane assembly 99.5 4.7E-14 1.6E-18 137.2 12.5 109 31-139 11-134 (261)
62 3uq3_A Heat shock protein STI1 99.5 2E-14 6.7E-19 137.9 9.6 103 32-134 2-111 (258)
63 3ieg_A DNAJ homolog subfamily 99.5 4.1E-14 1.4E-18 142.3 11.7 214 34-249 2-220 (359)
64 3u4t_A TPR repeat-containing p 99.5 2E-14 6.7E-19 139.8 8.4 207 31-249 33-253 (272)
65 4eqf_A PEX5-related protein; a 99.5 5.5E-14 1.9E-18 143.2 12.1 203 34-249 64-279 (365)
66 2c2l_A CHIP, carboxy terminus 99.5 6.2E-14 2.1E-18 138.7 11.6 106 34-139 3-109 (281)
67 2q7f_A YRRB protein; TPR, prot 99.5 2.1E-13 7.3E-18 129.7 14.7 171 29-210 51-222 (243)
68 4abn_A Tetratricopeptide repea 99.5 3.3E-14 1.1E-18 151.5 10.0 176 31-210 98-287 (474)
69 2xev_A YBGF; tetratricopeptide 99.5 1.4E-13 4.8E-18 118.0 11.7 111 36-146 3-120 (129)
70 1elr_A TPR2A-domain of HOP; HO 99.5 1.6E-13 5.3E-18 117.1 11.8 118 33-151 2-127 (131)
71 3rqz_A Metallophosphoesterase; 99.5 1.7E-13 5.9E-18 132.9 13.6 187 190-428 5-216 (246)
72 3urz_A Uncharacterized protein 99.5 3.4E-13 1.2E-17 127.0 14.7 88 29-116 32-136 (208)
73 1zu2_A Mitochondrial import re 99.5 6.2E-14 2.1E-18 124.9 9.0 96 46-141 13-130 (158)
74 3hym_B Cell division cycle pro 99.5 1.3E-13 4.4E-18 137.3 12.4 210 30-249 85-302 (330)
75 4abn_A Tetratricopeptide repea 99.5 7.5E-14 2.6E-18 148.7 11.3 165 29-211 131-315 (474)
76 2yhc_A BAMD, UPF0169 lipoprote 99.5 3E-13 1E-17 128.9 14.1 107 35-141 4-135 (225)
77 3as5_A MAMA; tetratricopeptide 99.5 1.8E-13 6.2E-18 123.8 12.0 169 32-211 5-174 (186)
78 1na0_A Designed protein CTPR3; 99.5 4.6E-13 1.6E-17 112.9 13.5 114 34-147 8-122 (125)
79 3gyz_A Chaperone protein IPGC; 99.5 2.6E-14 8.8E-19 128.0 5.8 100 54-153 21-121 (151)
80 1hh8_A P67PHOX, NCF-2, neutrop 99.5 4.9E-13 1.7E-17 125.2 14.7 119 32-152 3-137 (213)
81 2kck_A TPR repeat; tetratricop 99.5 1.3E-13 4.4E-18 114.3 9.4 104 33-136 4-111 (112)
82 2pzi_A Probable serine/threoni 99.5 5.7E-14 2E-18 156.4 9.2 143 30-184 428-571 (681)
83 4gco_A Protein STI-1; structur 99.5 1.1E-13 3.7E-18 119.7 8.8 112 60-182 4-116 (126)
84 3hym_B Cell division cycle pro 99.5 1.4E-13 4.9E-18 137.0 10.8 219 31-249 18-268 (330)
85 1nnw_A Hypothetical protein; s 99.5 1.3E-12 4.6E-17 126.9 17.3 198 190-430 3-222 (252)
86 1fch_A Peroxisomal targeting s 99.4 7E-13 2.4E-17 134.6 15.1 212 35-248 64-282 (368)
87 1xnf_A Lipoprotein NLPI; TPR, 99.4 7.8E-13 2.7E-17 128.3 14.6 113 30-142 38-151 (275)
88 4eqf_A PEX5-related protein; a 99.4 3.2E-14 1.1E-18 144.9 4.8 207 29-248 93-312 (365)
89 3as5_A MAMA; tetratricopeptide 99.4 1.8E-12 6.2E-17 117.2 15.6 121 32-152 39-160 (186)
90 2ho1_A Type 4 fimbrial biogene 99.4 8.4E-13 2.9E-17 126.7 13.7 170 30-210 66-238 (252)
91 3cv0_A Peroxisome targeting si 99.4 1.2E-12 4.1E-17 130.1 15.1 203 34-249 20-238 (327)
92 2vsy_A XCC0866; transferase, g 99.4 7.9E-13 2.7E-17 143.8 14.3 146 25-181 13-162 (568)
93 2gw1_A Mitochondrial precursor 99.4 5.1E-13 1.7E-17 141.7 12.5 108 31-138 2-109 (514)
94 3qky_A Outer membrane assembly 99.4 7.4E-13 2.5E-17 128.7 12.5 148 34-182 51-230 (261)
95 3uq3_A Heat shock protein STI1 99.4 6.6E-13 2.3E-17 127.2 11.9 167 34-211 37-237 (258)
96 2e2e_A Formate-dependent nitri 99.4 1E-12 3.6E-17 119.6 12.1 112 29-140 38-153 (177)
97 3k9i_A BH0479 protein; putativ 99.4 1.4E-13 4.8E-18 116.9 5.5 94 47-140 2-99 (117)
98 2fo7_A Synthetic consensus TPR 99.4 3.9E-12 1.3E-16 108.3 14.6 117 36-152 2-119 (136)
99 3ieg_A DNAJ homolog subfamily 99.4 7.4E-13 2.5E-17 133.1 11.3 208 29-249 31-266 (359)
100 3u4t_A TPR repeat-containing p 99.4 6.9E-13 2.4E-17 128.8 10.7 172 35-211 74-251 (272)
101 3qou_A Protein YBBN; thioredox 99.4 5.9E-13 2E-17 132.0 10.4 167 32-209 114-283 (287)
102 3fp2_A TPR repeat-containing p 99.4 9E-13 3.1E-17 141.0 12.4 108 29-137 19-127 (537)
103 2xpi_A Anaphase-promoting comp 99.4 1.2E-12 4.2E-17 142.1 12.6 209 31-249 369-582 (597)
104 2vgx_A Chaperone SYCD; alterna 99.4 6.4E-13 2.2E-17 118.2 8.3 98 55-152 7-105 (148)
105 2pzi_A Probable serine/threoni 99.4 1.9E-13 6.4E-18 152.2 5.0 162 33-209 392-562 (681)
106 2y4t_A DNAJ homolog subfamily 99.4 9.5E-13 3.2E-17 137.6 10.1 220 30-249 55-327 (450)
107 3fp2_A TPR repeat-containing p 99.4 1.4E-12 4.7E-17 139.5 11.5 169 33-212 241-409 (537)
108 2r5s_A Uncharacterized protein 99.4 4.8E-13 1.6E-17 122.2 6.7 167 32-210 3-173 (176)
109 4g1t_A Interferon-induced prot 99.4 4.8E-13 1.7E-17 141.0 7.6 210 33-250 49-280 (472)
110 2vq2_A PILW, putative fimbrial 99.4 4.1E-12 1.4E-16 118.9 13.1 122 31-152 38-163 (225)
111 3qfm_A SAPH, putative uncharac 99.4 3.8E-12 1.3E-16 125.0 13.3 114 190-309 13-139 (270)
112 1fch_A Peroxisomal targeting s 99.4 4.3E-12 1.5E-16 128.7 13.9 198 30-241 93-309 (368)
113 2l6j_A TPR repeat-containing p 99.4 1.5E-12 5.2E-17 108.2 8.2 95 34-128 3-104 (111)
114 2gw1_A Mitochondrial precursor 99.3 2E-12 6.8E-17 137.1 10.4 208 31-249 233-447 (514)
115 1hh8_A P67PHOX, NCF-2, neutrop 99.3 1.2E-11 4.1E-16 115.6 14.2 101 35-135 37-154 (213)
116 2yhc_A BAMD, UPF0169 lipoprote 99.3 9.9E-12 3.4E-16 118.2 13.4 138 34-182 40-219 (225)
117 3cv0_A Peroxisome targeting si 99.3 1.1E-12 3.8E-17 130.3 6.1 207 30-249 50-272 (327)
118 2xcb_A PCRH, regulatory protei 99.3 3.1E-12 1.1E-16 112.5 8.3 97 56-152 5-102 (142)
119 2vsy_A XCC0866; transferase, g 99.3 6.1E-12 2.1E-16 136.7 10.6 164 48-224 2-169 (568)
120 2r5s_A Uncharacterized protein 99.3 1E-11 3.5E-16 113.3 10.1 127 27-153 32-161 (176)
121 2e2e_A Formate-dependent nitri 99.3 5.9E-12 2E-16 114.5 8.5 111 42-152 17-131 (177)
122 2xpi_A Anaphase-promoting comp 99.3 9.6E-12 3.3E-16 135.0 11.2 120 32-151 302-422 (597)
123 3edt_B KLC 2, kinesin light ch 99.3 8.4E-12 2.9E-16 120.8 9.4 124 30-153 38-186 (283)
124 2ond_A Cleavage stimulation fa 99.3 7.1E-12 2.4E-16 125.3 8.6 210 29-249 44-273 (308)
125 1qqe_A Vesicular transport pro 99.3 2.8E-11 9.5E-16 120.0 12.5 138 32-180 74-232 (292)
126 3mkr_A Coatomer subunit epsilo 99.2 2.3E-11 7.8E-16 120.9 11.4 119 33-152 128-250 (291)
127 2fo7_A Synthetic consensus TPR 99.2 6.5E-11 2.2E-15 100.6 12.7 104 32-135 32-136 (136)
128 3qou_A Protein YBBN; thioredox 99.2 1.5E-11 5E-16 121.9 9.6 126 28-153 144-272 (287)
129 3mkr_A Coatomer subunit epsilo 99.2 3.9E-11 1.3E-15 119.2 12.0 205 31-251 61-269 (291)
130 3nf1_A KLC 1, kinesin light ch 99.2 1.3E-11 4.5E-16 121.5 8.6 181 22-210 14-224 (311)
131 4gcn_A Protein STI-1; structur 99.2 1.7E-11 5.9E-16 105.8 8.2 82 68-149 8-89 (127)
132 1xnf_A Lipoprotein NLPI; TPR, 99.2 2.8E-11 9.6E-16 117.2 10.6 155 45-211 15-174 (275)
133 4a1s_A PINS, partner of inscut 99.2 3.8E-11 1.3E-15 123.8 11.4 212 29-241 42-287 (411)
134 2ond_A Cleavage stimulation fa 99.2 5.6E-11 1.9E-15 118.7 11.7 174 31-212 95-272 (308)
135 1hxi_A PEX5, peroxisome target 99.2 7.8E-11 2.7E-15 100.7 10.4 100 69-179 18-117 (121)
136 1na3_A Designed protein CTPR2; 99.2 2.1E-10 7.3E-15 91.4 12.4 85 32-116 6-91 (91)
137 2kat_A Uncharacterized protein 99.2 7.6E-11 2.6E-15 99.2 10.0 85 52-136 2-87 (115)
138 1qqe_A Vesicular transport pro 99.2 3E-11 1E-15 119.8 8.7 120 33-152 35-174 (292)
139 3upv_A Heat shock protein STI1 99.2 1.3E-10 4.4E-15 99.3 11.0 86 68-153 4-89 (126)
140 4g1t_A Interferon-induced prot 99.2 5.4E-11 1.9E-15 125.2 10.1 174 31-211 90-277 (472)
141 2kc7_A BFR218_protein; tetratr 99.2 6.7E-11 2.3E-15 96.5 8.4 91 39-137 4-96 (99)
142 3nf1_A KLC 1, kinesin light ch 99.2 6E-11 2.1E-15 116.7 9.3 125 30-154 64-213 (311)
143 1p5q_A FKBP52, FK506-binding p 99.1 3.5E-10 1.2E-14 114.7 14.1 102 30-131 191-294 (336)
144 1dce_A Protein (RAB geranylger 99.1 2.6E-10 8.8E-15 123.9 13.7 153 28-180 56-225 (567)
145 2hr2_A Hypothetical protein; a 99.1 1.7E-10 5.9E-15 102.8 10.1 86 68-153 11-119 (159)
146 3edt_B KLC 2, kinesin light ch 99.1 1.7E-10 5.7E-15 111.6 11.0 103 30-132 80-199 (283)
147 3dra_A Protein farnesyltransfe 99.1 7.8E-11 2.7E-15 117.6 8.5 97 53-149 51-157 (306)
148 1ouv_A Conserved hypothetical 99.1 3.1E-10 1E-14 110.6 12.5 190 31-243 2-212 (273)
149 2z72_A Protein-tyrosine-phosph 99.1 2.6E-11 8.7E-16 123.1 4.6 69 457-527 71-150 (342)
150 3ro3_A PINS homolog, G-protein 99.1 2.8E-10 9.6E-15 100.0 10.7 123 30-152 4-145 (164)
151 3sz7_A HSC70 cochaperone (SGT) 99.1 3.7E-10 1.3E-14 101.4 11.4 85 68-152 11-95 (164)
152 1a17_A Serine/threonine protei 99.1 5.7E-10 2E-14 99.2 12.1 103 30-132 42-147 (166)
153 1dce_A Protein (RAB geranylger 99.1 5.9E-10 2E-14 121.0 13.9 141 29-180 19-177 (567)
154 3ulq_A Response regulator aspa 99.1 3.3E-10 1.1E-14 116.3 10.7 124 30-153 138-281 (383)
155 3ulq_A Response regulator aspa 99.1 3.9E-10 1.3E-14 115.8 11.2 166 38-211 106-294 (383)
156 2l6j_A TPR repeat-containing p 99.1 3.5E-10 1.2E-14 93.6 8.6 82 67-148 3-90 (111)
157 1na3_A Designed protein CTPR2; 99.1 5.3E-10 1.8E-14 89.0 9.1 80 68-147 9-88 (91)
158 3ro2_A PINS homolog, G-protein 99.1 5.5E-10 1.9E-14 110.4 11.2 118 34-151 4-138 (338)
159 3q49_B STIP1 homology and U bo 99.1 9.8E-10 3.3E-14 94.7 11.3 89 64-152 4-93 (137)
160 1ouv_A Conserved hypothetical 99.0 6.7E-10 2.3E-14 108.2 11.1 112 32-148 35-158 (273)
161 3sf4_A G-protein-signaling mod 99.0 4.6E-10 1.6E-14 114.8 10.3 117 35-151 9-142 (406)
162 3dss_A Geranylgeranyl transfer 99.0 1.2E-09 4.1E-14 109.8 12.9 154 28-181 57-227 (331)
163 1kt0_A FKBP51, 51 kDa FK506-bi 99.0 3.1E-11 1.1E-15 127.8 1.2 126 47-183 246-387 (457)
164 3dss_A Geranylgeranyl transfer 99.0 1.9E-09 6.5E-14 108.3 13.9 151 28-179 101-270 (331)
165 2kck_A TPR repeat; tetratricop 99.0 4.9E-10 1.7E-14 92.3 7.9 88 65-152 2-93 (112)
166 3ma5_A Tetratricopeptide repea 99.0 3.5E-10 1.2E-14 93.0 6.7 72 65-136 3-75 (100)
167 2qfc_A PLCR protein; TPR, HTH, 99.0 4.7E-09 1.6E-13 103.7 16.1 137 30-174 70-226 (293)
168 3q7a_A Farnesyltransferase alp 99.0 3.5E-09 1.2E-13 106.9 14.9 125 29-153 48-176 (349)
169 3k9i_A BH0479 protein; putativ 99.0 2.4E-09 8.1E-14 90.4 11.5 75 31-105 23-98 (117)
170 3q15_A PSP28, response regulat 99.0 1.4E-09 4.7E-14 111.6 11.8 139 30-176 136-293 (378)
171 1zu2_A Mitochondrial import re 99.0 7.9E-10 2.7E-14 98.3 8.4 76 28-103 29-126 (158)
172 2qfc_A PLCR protein; TPR, HTH, 99.0 3.1E-09 1.1E-13 105.0 13.8 122 31-152 111-252 (293)
173 2dfj_A Diadenosinetetraphospha 99.0 1.6E-10 5.5E-15 113.7 4.0 72 460-537 4-80 (280)
174 2ifu_A Gamma-SNAP; membrane fu 99.0 7.1E-10 2.4E-14 110.7 8.7 122 31-153 32-172 (307)
175 3gw4_A Uncharacterized protein 99.0 1.9E-09 6.4E-14 99.3 10.7 135 33-175 24-178 (203)
176 3q15_A PSP28, response regulat 99.0 1.8E-09 6.2E-14 110.7 11.5 104 31-134 178-293 (378)
177 3q7a_A Farnesyltransferase alp 99.0 1E-08 3.5E-13 103.5 16.6 92 28-119 81-176 (349)
178 3u3w_A Transcriptional activat 99.0 2.2E-09 7.5E-14 106.1 11.3 135 35-176 115-269 (293)
179 3dra_A Protein farnesyltransfe 99.0 9.6E-10 3.3E-14 109.7 8.6 124 28-151 96-235 (306)
180 4a1s_A PINS, partner of inscut 99.0 3.1E-10 1.1E-14 117.0 5.2 104 31-134 122-255 (411)
181 2vyi_A SGTA protein; chaperone 99.0 3.6E-09 1.2E-13 89.4 11.0 89 31-119 42-131 (131)
182 3rkv_A Putative peptidylprolyl 99.0 1.6E-09 5.4E-14 97.0 9.0 86 68-153 11-114 (162)
183 2ifu_A Gamma-SNAP; membrane fu 98.9 9.2E-10 3.1E-14 109.8 7.8 104 33-137 74-190 (307)
184 3ma5_A Tetratricopeptide repea 98.9 2.9E-09 9.9E-14 87.4 9.2 88 30-117 2-92 (100)
185 2fbn_A 70 kDa peptidylprolyl i 98.9 4.7E-09 1.6E-13 97.2 11.7 96 35-130 88-185 (198)
186 3sf4_A G-protein-signaling mod 98.9 1.6E-09 5.5E-14 110.7 9.1 103 32-134 84-219 (406)
187 2lni_A Stress-induced-phosphop 98.9 3.6E-09 1.2E-13 90.0 9.7 88 30-117 45-133 (133)
188 2if4_A ATFKBP42; FKBP-like, al 98.9 8.3E-10 2.8E-14 112.0 6.4 102 36-137 231-334 (338)
189 1elw_A TPR1-domain of HOP; HOP 98.9 5.8E-09 2E-13 86.4 10.5 85 68-152 4-88 (118)
190 3rjv_A Putative SEL1 repeat pr 98.9 4.6E-09 1.6E-13 98.9 11.0 112 33-148 16-137 (212)
191 1ihg_A Cyclophilin 40; ppiase 98.9 7.2E-09 2.5E-13 106.5 13.2 95 30-124 268-363 (370)
192 2xev_A YBGF; tetratricopeptide 98.9 4.1E-09 1.4E-13 89.7 8.6 84 69-152 3-92 (129)
193 3ro2_A PINS homolog, G-protein 98.9 4E-09 1.4E-13 104.1 9.7 122 31-152 179-319 (338)
194 2kc7_A BFR218_protein; tetratr 98.9 5.4E-09 1.8E-13 84.9 8.1 69 71-139 3-72 (99)
195 4f3v_A ESX-1 secretion system 98.9 7.4E-09 2.5E-13 101.3 10.4 113 30-144 131-249 (282)
196 2c2l_A CHIP, carboxy terminus 98.8 1.4E-08 4.7E-13 100.1 11.9 86 67-152 3-88 (281)
197 2ooe_A Cleavage stimulation fa 98.8 5.3E-09 1.8E-13 112.4 9.6 172 29-211 266-455 (530)
198 3ro3_A PINS homolog, G-protein 98.8 1.4E-08 4.7E-13 88.9 10.1 103 32-134 46-161 (164)
199 3u3w_A Transcriptional activat 98.8 1.6E-08 5.6E-13 99.8 11.6 171 32-210 72-266 (293)
200 2dba_A Smooth muscle cell asso 98.8 1.6E-08 5.4E-13 87.8 10.1 86 67-152 27-115 (148)
201 1na0_A Designed protein CTPR3; 98.8 2.3E-08 7.9E-13 83.5 10.8 85 68-152 9-93 (125)
202 2ooe_A Cleavage stimulation fa 98.8 1.3E-08 4.6E-13 109.2 11.0 135 31-173 317-454 (530)
203 3rjv_A Putative SEL1 repeat pr 98.8 2E-08 6.9E-13 94.4 9.3 113 33-148 48-174 (212)
204 1elr_A TPR2A-domain of HOP; HO 98.8 2.3E-08 7.9E-13 84.4 8.8 85 68-152 4-95 (131)
205 2kat_A Uncharacterized protein 98.7 3.4E-08 1.2E-12 82.7 9.0 87 30-116 14-103 (115)
206 3n71_A Histone lysine methyltr 98.7 5.3E-08 1.8E-12 103.4 12.0 119 34-152 308-451 (490)
207 1s3l_A Hypothetical protein MJ 98.7 1.9E-07 6.5E-12 86.4 13.5 64 190-263 27-90 (190)
208 1pc2_A Mitochondria fission pr 98.7 5.1E-08 1.7E-12 85.7 9.0 94 50-143 13-112 (152)
209 3gw4_A Uncharacterized protein 98.7 4.3E-08 1.5E-12 90.0 8.9 158 45-211 2-177 (203)
210 4f3v_A ESX-1 secretion system 98.6 5.5E-08 1.9E-12 95.1 8.5 118 36-153 103-225 (282)
211 3bee_A Putative YFRE protein; 98.6 1.9E-07 6.4E-12 75.7 9.7 73 65-137 2-78 (93)
212 1hz4_A MALT regulatory protein 98.6 2.3E-07 7.8E-12 94.3 11.9 173 31-211 10-204 (373)
213 1uf3_A Hypothetical protein TT 98.6 3.6E-07 1.2E-11 86.4 11.6 71 190-262 7-77 (228)
214 1hz4_A MALT regulatory protein 98.6 4.8E-07 1.6E-11 91.9 13.3 134 33-174 51-204 (373)
215 2qjc_A Diadenosine tetraphosph 98.5 1.3E-08 4.3E-13 99.3 0.8 77 452-536 14-95 (262)
216 2a22_A Vacuolar protein sortin 98.5 5.6E-07 1.9E-11 84.9 11.7 118 190-385 27-153 (215)
217 1klx_A Cysteine rich protein B 98.5 7.3E-07 2.5E-11 77.7 11.3 89 41-132 31-127 (138)
218 2v5f_A Prolyl 4-hydroxylase su 98.5 5.8E-07 2E-11 74.3 9.9 75 35-109 5-87 (104)
219 2xm6_A Protein corresponding t 98.5 8.3E-07 2.8E-11 94.2 13.6 106 37-145 330-449 (490)
220 2v5f_A Prolyl 4-hydroxylase su 98.5 4.8E-07 1.6E-11 74.8 9.2 79 67-145 4-89 (104)
221 2xm6_A Protein corresponding t 98.5 4.9E-07 1.7E-11 96.0 11.4 113 31-148 35-159 (490)
222 2kkn_A Uncharacterized protein 98.5 7.8E-07 2.7E-11 81.3 10.6 84 190-309 24-112 (178)
223 3qww_A SET and MYND domain-con 98.5 5.5E-07 1.9E-11 94.1 10.8 95 37-131 300-411 (433)
224 3qwp_A SET and MYND domain-con 98.4 1.9E-06 6.6E-11 89.9 13.6 107 33-139 285-413 (429)
225 1z2w_A Vacuolar protein sortin 98.4 3E-06 1E-10 78.3 13.4 113 190-385 12-129 (192)
226 3ly7_A Transcriptional activat 98.4 2.5E-06 8.5E-11 86.1 13.0 101 35-136 196-344 (372)
227 1su1_A Hypothetical protein YF 98.4 4.4E-07 1.5E-11 85.2 7.0 68 190-262 27-102 (208)
228 3ck2_A Conserved uncharacteriz 98.4 6.1E-06 2.1E-10 75.1 14.3 108 190-386 8-118 (176)
229 3n71_A Histone lysine methyltr 98.4 9.7E-07 3.3E-11 93.7 10.0 105 28-132 344-465 (490)
230 3e4b_A ALGK; tetratricopeptide 98.3 1.1E-06 3.9E-11 92.4 9.0 106 37-147 178-294 (452)
231 3u64_A Protein TP_0956; tetrat 98.3 2.6E-06 9E-11 82.6 10.3 107 29-135 146-273 (301)
232 3bee_A Putative YFRE protein; 98.2 1.9E-06 6.4E-11 69.7 7.0 73 31-103 2-78 (93)
233 1klx_A Cysteine rich protein B 98.2 4.5E-06 1.6E-10 72.6 9.5 94 48-148 8-105 (138)
234 3e4b_A ALGK; tetratricopeptide 98.2 3.7E-06 1.3E-10 88.5 9.6 101 37-146 215-328 (452)
235 1xm7_A Hypothetical protein AQ 98.2 4.8E-06 1.6E-10 77.1 8.9 136 190-390 3-156 (195)
236 1g5b_A Serine/threonine protei 98.2 8.2E-07 2.8E-11 84.1 3.5 61 459-527 15-76 (221)
237 4b4t_Q 26S proteasome regulato 98.1 7.1E-06 2.4E-10 84.7 10.8 175 28-210 48-245 (434)
238 3ib7_A ICC protein; metallopho 98.1 8.7E-06 3E-10 81.5 10.3 73 189-261 26-113 (330)
239 1pc2_A Mitochondria fission pr 98.1 1.2E-05 4.2E-10 70.6 9.6 78 34-111 31-114 (152)
240 1nzn_A CGI-135 protein, fissio 98.0 1.5E-05 5.2E-10 67.4 8.7 100 48-147 14-119 (126)
241 3mv2_B Coatomer subunit epsilo 98.0 4.9E-05 1.7E-09 75.1 13.5 115 35-152 100-227 (310)
242 1xi4_A Clathrin heavy chain; a 98.0 2.7E-05 9.4E-10 90.0 12.3 93 32-128 1102-1221(1630)
243 3mv2_B Coatomer subunit epsilo 98.0 2.1E-05 7.3E-10 77.8 10.0 117 33-150 134-269 (310)
244 3d03_A Phosphohydrolase; glyce 98.0 0.00019 6.6E-09 69.5 16.5 69 190-262 2-85 (274)
245 1b89_A Protein (clathrin heavy 98.0 1.3E-05 4.3E-10 83.1 7.9 100 37-148 124-253 (449)
246 1xi4_A Clathrin heavy chain; a 97.9 3E-05 1E-09 89.7 11.0 106 36-148 1196-1326(1630)
247 4b4t_Q 26S proteasome regulato 97.8 5E-05 1.7E-09 78.3 10.0 102 36-137 96-210 (434)
248 1b89_A Protein (clathrin heavy 97.7 3.2E-06 1.1E-10 87.5 -0.9 110 33-153 30-139 (449)
249 3ly7_A Transcriptional activat 97.7 0.00016 5.5E-09 72.9 10.1 75 29-103 271-345 (372)
250 3rqz_A Metallophosphoesterase; 97.7 3E-05 1E-09 74.5 4.7 59 460-527 7-65 (246)
251 3qwp_A SET and MYND domain-con 97.6 0.0002 6.8E-09 74.6 10.6 89 27-115 321-426 (429)
252 3u64_A Protein TP_0956; tetrat 97.6 0.00045 1.6E-08 67.0 12.1 119 30-148 101-251 (301)
253 3qww_A SET and MYND domain-con 97.6 0.00014 4.8E-09 75.8 9.0 77 28-104 333-423 (433)
254 1y8m_A FIS1; mitochondria, unk 97.5 0.00046 1.6E-08 59.3 9.8 77 65-141 36-116 (144)
255 3qfm_A SAPH, putative uncharac 97.5 4.5E-05 1.5E-09 74.4 4.0 60 461-527 16-75 (270)
256 3o48_A Mitochondria fission 1 97.5 0.00051 1.7E-08 58.3 9.6 86 64-149 36-125 (134)
257 3ffl_A Anaphase-promoting comp 97.5 0.0005 1.7E-08 60.7 9.9 95 34-128 19-148 (167)
258 1nnw_A Hypothetical protein; s 97.5 5.2E-05 1.8E-09 72.9 3.7 63 461-527 6-73 (252)
259 2yvt_A Hypothetical protein AQ 97.4 5E-05 1.7E-09 73.2 2.9 72 190-263 7-104 (260)
260 4e6h_A MRNA 3'-END-processing 97.2 0.00038 1.3E-08 76.7 7.0 103 38-140 381-508 (679)
261 3rl5_A Metallophosphoesterase 97.2 0.011 3.7E-07 57.9 16.1 65 188-263 59-125 (296)
262 2xmo_A LMO2642 protein; phosph 97.1 0.0043 1.5E-07 64.7 14.0 61 361-422 261-322 (443)
263 1nzn_A CGI-135 protein, fissio 97.1 0.0023 7.7E-08 54.1 9.4 77 35-111 35-117 (126)
264 4e6h_A MRNA 3'-END-processing 97.0 0.0034 1.2E-07 69.1 12.2 101 34-134 433-536 (679)
265 4h7y_A Dual specificity protei 97.0 0.0039 1.3E-07 53.9 9.6 106 32-138 10-130 (161)
266 1y8m_A FIS1; mitochondria, unk 96.9 0.012 4.2E-07 50.5 11.7 77 35-111 39-120 (144)
267 3o48_A Mitochondria fission 1 96.8 0.01 3.6E-07 50.2 10.7 78 35-112 40-122 (134)
268 1su1_A Hypothetical protein YF 96.8 0.001 3.6E-08 61.9 4.8 63 459-527 28-98 (208)
269 2uy1_A Cleavage stimulation fa 96.4 0.073 2.5E-06 56.2 16.4 157 35-211 286-449 (493)
270 2nxf_A Putative dimetal phosph 96.2 0.0017 5.8E-08 64.1 2.7 71 190-261 7-100 (322)
271 2q8u_A Exonuclease, putative; 96.2 0.0019 6.3E-08 64.9 2.8 72 188-262 18-110 (336)
272 3av0_A DNA double-strand break 96.1 0.0044 1.5E-07 63.4 5.0 71 190-262 22-109 (386)
273 2ff4_A Probable regulatory pro 96.0 0.069 2.4E-06 54.5 13.6 102 29-130 109-233 (388)
274 3ffl_A Anaphase-promoting comp 95.9 0.03 1E-06 49.4 8.7 80 32-112 60-165 (167)
275 1ii7_A MRE11 nuclease; RAD50, 95.9 0.0054 1.9E-07 61.4 4.5 69 191-261 3-88 (333)
276 2uy1_A Cleavage stimulation fa 95.8 0.04 1.4E-06 58.2 11.2 32 35-67 213-244 (493)
277 4gns_B Protein CSD3, chitin bi 95.5 0.032 1.1E-06 61.6 9.2 60 69-128 338-397 (754)
278 1ute_A Protein (II purple acid 95.4 0.054 1.9E-06 52.8 9.8 73 189-261 7-95 (313)
279 1uf3_A Hypothetical protein TT 94.7 0.028 9.4E-07 52.2 4.9 64 461-527 10-73 (228)
280 4g26_A Pentatricopeptide repea 94.7 0.31 1E-05 51.5 13.5 95 37-131 107-204 (501)
281 3tho_B Exonuclease, putative; 94.3 0.012 4.1E-07 60.0 1.6 43 217-261 44-91 (379)
282 1zbp_A Hypothetical protein VP 94.3 0.47 1.6E-05 45.2 12.2 62 43-104 5-67 (273)
283 1s3l_A Hypothetical protein MJ 94.1 0.042 1.4E-06 50.1 4.5 58 459-527 28-85 (190)
284 3kae_A CDC27, possible protein 94.1 0.54 1.8E-05 41.4 11.0 96 39-138 37-150 (242)
285 4g26_A Pentatricopeptide repea 93.9 0.45 1.5E-05 50.2 12.8 82 49-131 84-169 (501)
286 3t1i_A Double-strand break rep 93.8 0.038 1.3E-06 56.9 4.2 53 189-242 33-97 (431)
287 4fbk_A DNA repair and telomere 93.7 0.045 1.6E-06 56.8 4.4 49 190-239 78-138 (472)
288 4gns_B Protein CSD3, chitin bi 93.6 0.2 6.7E-06 55.3 9.5 62 34-99 336-398 (754)
289 4fbw_A DNA repair protein RAD3 93.4 0.054 1.8E-06 55.6 4.4 50 189-239 14-75 (417)
290 2qfp_A Purple acid phosphatase 93.0 0.089 3E-06 54.3 5.3 71 189-262 120-198 (424)
291 2yvt_A Hypothetical protein AQ 92.7 0.04 1.4E-06 52.4 2.1 40 460-502 9-49 (260)
292 3kae_A CDC27, possible protein 92.2 4.1 0.00014 35.9 13.7 68 35-102 62-148 (242)
293 1xm7_A Hypothetical protein AQ 92.2 0.11 3.8E-06 47.2 4.2 38 486-527 44-81 (195)
294 1xzw_A Purple acid phosphatase 91.9 0.12 4.1E-06 53.3 4.7 71 189-262 127-205 (426)
295 1ya0_A SMG-7 transcript varian 91.7 0.43 1.5E-05 50.1 8.5 78 70-147 154-231 (497)
296 1ya0_A SMG-7 transcript varian 90.5 1.1 3.7E-05 47.1 10.2 80 36-115 153-233 (497)
297 2kkn_A Uncharacterized protein 89.9 0.099 3.4E-06 47.0 1.5 58 460-527 26-83 (178)
298 3txn_A 26S proteasome regulato 89.3 2.6 8.9E-05 42.7 11.6 91 40-130 104-209 (394)
299 2a22_A Vacuolar protein sortin 89.0 0.29 9.8E-06 45.3 4.0 57 459-527 28-88 (215)
300 1zbp_A Hypothetical protein VP 88.9 0.76 2.6E-05 43.8 6.8 61 77-137 6-66 (273)
301 3mkq_A Coatomer beta'-subunit; 88.1 2.5 8.6E-05 46.5 11.7 58 68-125 681-746 (814)
302 2q8u_A Exonuclease, putative; 88.1 0.35 1.2E-05 48.0 4.3 38 488-527 64-106 (336)
303 4b4t_R RPN7, 26S proteasome re 88.0 1.1 3.8E-05 46.1 8.0 95 37-131 133-237 (429)
304 3spa_A Mtrpol, DNA-directed RN 87.7 5 0.00017 45.6 13.4 95 36-131 128-230 (1134)
305 2ff4_A Probable regulatory pro 87.7 2.2 7.6E-05 43.1 10.0 62 35-96 171-233 (388)
306 3ib7_A ICC protein; metallopho 86.1 0.87 3E-05 44.5 5.8 41 487-527 68-110 (330)
307 3tgh_A Glideosome-associated p 85.8 0.27 9.1E-06 49.1 1.8 72 190-262 5-87 (342)
308 4b4t_P 26S proteasome regulato 85.3 10 0.00036 38.9 13.8 99 33-131 135-247 (445)
309 1z2w_A Vacuolar protein sortin 83.3 0.54 1.8E-05 42.5 2.5 33 486-527 41-73 (192)
310 1ii7_A MRE11 nuclease; RAD50, 83.2 0.87 3E-05 45.1 4.3 40 487-527 42-85 (333)
311 2nxf_A Putative dimetal phosph 83.0 0.6 2.1E-05 45.3 3.0 41 487-527 53-97 (322)
312 3d03_A Phosphohydrolase; glyce 82.6 2 6.8E-05 40.6 6.5 38 487-527 43-81 (274)
313 3av0_A DNA double-strand break 81.9 1.2 4.2E-05 45.0 4.9 40 487-527 62-105 (386)
314 4fbk_A DNA repair and telomere 80.8 2.2 7.4E-05 44.2 6.2 25 487-511 117-141 (472)
315 4b4t_S RPN3, 26S proteasome re 80.7 2.7 9.2E-05 44.0 6.9 69 68-138 231-306 (523)
316 3mkq_A Coatomer beta'-subunit; 80.6 8.2 0.00028 42.3 11.5 84 35-130 681-764 (814)
317 3mkq_B Coatomer subunit alpha; 80.4 15 0.00053 32.4 10.9 47 44-94 14-60 (177)
318 4fhn_B Nucleoporin NUP120; pro 79.8 4.9 0.00017 46.8 9.6 90 38-127 845-963 (1139)
319 3qfk_A Uncharacterized protein 79.8 0.68 2.3E-05 49.1 2.2 66 190-260 21-112 (527)
320 4fbw_A DNA repair protein RAD3 79.5 2.2 7.4E-05 43.6 5.7 25 487-511 54-78 (417)
321 4h7y_A Dual specificity protei 79.4 20 0.00068 30.9 10.7 74 29-103 55-129 (161)
322 1wfd_A Hypothetical protein 15 78.5 22 0.00074 27.8 10.4 34 30-63 10-43 (93)
323 3mkq_B Coatomer subunit alpha; 78.1 5.1 0.00018 35.6 7.0 55 67-129 7-61 (177)
324 3t1i_A Double-strand break rep 77.7 2.3 7.7E-05 43.7 5.2 26 487-512 73-98 (431)
325 3ck2_A Conserved uncharacteriz 77.1 0.73 2.5E-05 40.9 1.2 52 460-527 10-61 (176)
326 4a5x_A MITD1, MIT domain-conta 76.6 23 0.0008 27.2 9.6 33 31-63 12-44 (86)
327 2xmo_A LMO2642 protein; phosph 75.9 2.3 8E-05 43.6 4.8 40 487-527 94-135 (443)
328 3tho_B Exonuclease, putative; 75.2 2 7E-05 43.3 4.1 39 487-527 45-88 (379)
329 2w2u_A Hypothetical P60 katani 74.9 3.7 0.00013 31.5 4.5 36 28-63 12-47 (83)
330 1hp1_A 5'-nucleotidase; metall 72.7 1.3 4.4E-05 46.8 1.9 66 190-260 10-94 (516)
331 2z1a_A 5'-nucleotidase; metal- 71.5 1.8 6.3E-05 46.0 2.8 67 190-261 31-119 (552)
332 1qsa_A Protein (soluble lytic 71.3 11 0.00038 40.5 8.9 115 38-153 217-336 (618)
333 2cpt_A SKD1 protein, vacuolar 71.1 9.5 0.00032 31.3 6.4 34 30-63 13-46 (117)
334 3txn_A 26S proteasome regulato 71.0 21 0.00072 36.0 10.4 99 33-131 17-168 (394)
335 2vkj_A TM1634; membrane protei 70.7 24 0.00081 27.2 7.9 35 33-67 51-85 (106)
336 2v6y_A AAA family ATPase, P60 70.1 6.8 0.00023 30.0 5.0 32 32-63 8-39 (83)
337 4h2g_A 5'-nucleotidase; dimer, 69.9 1.9 6.6E-05 45.8 2.5 65 191-260 28-117 (546)
338 3rl5_A Metallophosphoesterase 68.7 3.8 0.00013 39.7 4.1 55 461-527 64-120 (296)
339 2v6x_A Vacuolar protein sortin 66.0 11 0.00037 28.9 5.5 34 30-63 8-41 (85)
340 2crb_A Nuclear receptor bindin 64.1 18 0.00062 28.1 6.1 33 31-63 11-43 (97)
341 2w2u_A Hypothetical P60 katani 63.1 8.7 0.0003 29.4 4.4 13 80-92 31-43 (83)
342 3ztv_A NAD nucleotidase, NADN; 62.9 3.4 0.00012 44.2 2.7 65 191-260 15-105 (579)
343 2v6y_A AAA family ATPase, P60 62.5 9 0.00031 29.3 4.4 12 53-64 10-21 (83)
344 1t71_A Phosphatase, conserved 60.6 4.1 0.00014 39.1 2.6 68 190-262 6-76 (281)
345 3lpz_A GET4 (YOR164C homolog); 57.4 1E+02 0.0035 30.2 11.9 26 100-125 134-159 (336)
346 3ax2_A Mitochondrial import re 56.9 29 0.001 25.8 6.1 29 39-67 21-49 (73)
347 4fhn_B Nucleoporin NUP120; pro 56.4 43 0.0015 38.8 10.7 90 41-134 818-931 (1139)
348 2cfu_A SDSA1; SDS-hydrolase, l 50.8 46 0.0016 35.9 9.2 53 68-120 449-501 (658)
349 3ive_A Nucleotidase; structura 50.8 5 0.00017 42.1 1.5 31 366-396 217-248 (509)
350 4b4t_R RPN7, 26S proteasome re 50.7 19 0.00066 36.6 5.9 35 100-134 129-163 (429)
351 1wy6_A Hypothetical protein ST 50.4 48 0.0016 28.1 7.0 51 81-131 104-154 (172)
352 2qfp_A Purple acid phosphatase 49.8 16 0.00056 37.0 5.2 39 487-527 149-194 (424)
353 1wfd_A Hypothetical protein 15 49.0 15 0.0005 28.8 3.6 13 52-64 13-25 (93)
354 3jyf_A 2',3'-cyclic nucleotide 49.0 7.4 0.00025 38.5 2.3 66 191-261 11-105 (339)
355 3gve_A YFKN protein; alpha-bet 47.2 6.2 0.00021 39.1 1.4 41 191-231 14-70 (341)
356 2crb_A Nuclear receptor bindin 47.2 21 0.00071 27.7 4.0 26 104-129 17-42 (97)
357 2cpt_A SKD1 protein, vacuolar 47.1 20 0.00068 29.4 4.2 12 52-63 16-27 (117)
358 4b4t_S RPN3, 26S proteasome re 46.7 21 0.00071 37.3 5.3 70 30-101 226-303 (523)
359 4b4t_P 26S proteasome regulato 44.3 1.3E+02 0.0044 30.5 11.0 69 29-97 171-247 (445)
360 2v6x_A Vacuolar protein sortin 44.2 26 0.00091 26.6 4.4 16 80-95 25-40 (85)
361 4gq2_M Nucleoporin NUP120; bet 43.7 72 0.0025 36.1 9.7 88 41-132 816-927 (950)
362 1xzw_A Purple acid phosphatase 42.8 26 0.00089 35.5 5.4 39 487-527 156-201 (426)
363 1qsa_A Protein (soluble lytic 42.8 1.2E+02 0.0041 32.4 10.8 85 46-130 263-347 (618)
364 1om2_A Protein (mitochondrial 41.7 93 0.0032 24.3 7.1 38 31-68 12-53 (95)
365 1t70_A Phosphatase; crystal, X 40.0 34 0.0012 32.1 5.3 65 190-261 2-69 (255)
366 2wpv_A GET4, UPF0363 protein Y 39.4 2.1E+02 0.0071 27.6 10.9 27 100-126 132-158 (312)
367 2z06_A Putative uncharacterize 39.1 31 0.001 32.4 4.7 66 190-262 2-70 (252)
368 4a5x_A MITD1, MIT domain-conta 38.9 26 0.00089 26.9 3.5 19 112-130 26-44 (86)
369 2rpa_A Katanin P60 ATPase-cont 38.5 27 0.00092 26.3 3.4 27 38-64 15-41 (78)
370 3c9f_A 5'-nucleotidase; 2',3'- 37.3 9.2 0.00032 40.6 0.9 68 190-262 17-108 (557)
371 3t5x_A PCI domain-containing p 36.6 65 0.0022 28.9 6.5 36 31-66 10-45 (203)
372 4h1s_A 5'-nucleotidase; hydrol 36.2 14 0.00046 39.0 2.0 54 203-261 38-96 (530)
373 2cfu_A SDSA1; SDS-hydrolase, l 34.8 66 0.0022 34.7 7.2 50 35-84 449-499 (658)
374 1wy6_A Hypothetical protein ST 34.4 2.1E+02 0.0073 24.2 8.5 61 38-98 93-155 (172)
375 2dl1_A Spartin; SPG20, MIT, st 33.5 1.1E+02 0.0037 24.9 6.4 44 83-134 18-61 (116)
376 3e0j_A DNA polymerase subunit 33.3 41 0.0014 34.7 4.9 54 375-433 407-462 (476)
377 3ax2_A Mitochondrial import re 32.7 55 0.0019 24.2 4.2 29 74-102 23-51 (73)
378 4gq2_M Nucleoporin NUP120; bet 30.7 60 0.002 36.8 6.2 52 74-129 816-867 (950)
379 2ijq_A Hypothetical protein; s 30.6 2.1E+02 0.0072 24.6 8.3 31 36-66 33-63 (161)
380 3t5v_B Nuclear mRNA export pro 27.8 54 0.0018 33.6 4.8 87 49-135 140-254 (455)
381 3myv_A SUSD superfamily protei 27.7 1.2E+02 0.004 30.9 7.4 30 101-130 189-218 (454)
382 3t5v_B Nuclear mRNA export pro 27.0 2.4E+02 0.0081 28.8 9.4 63 39-101 180-254 (455)
383 2cwy_A Hypothetical protein TT 26.3 1.8E+02 0.0062 22.4 6.6 28 39-66 5-32 (94)
384 2rpa_A Katanin P60 ATPase-cont 26.3 55 0.0019 24.6 3.3 27 105-131 15-41 (78)
385 3re2_A Predicted protein; meni 25.9 1.4E+02 0.0048 29.5 6.8 45 87-131 276-325 (472)
386 3t5x_A PCI domain-containing p 25.0 2.3E+02 0.0079 25.2 8.0 53 68-120 14-71 (203)
387 3kez_A Putative sugar binding 25.0 1.3E+02 0.0045 30.6 7.2 29 102-130 196-224 (461)
388 3spa_A Mtrpol, DNA-directed RN 24.3 2E+02 0.007 32.8 8.8 60 39-98 169-231 (1134)
389 3ph0_C ASCG; type III secretio 24.3 1.8E+02 0.0063 20.2 6.0 42 80-122 18-60 (61)
390 2wdc_A SOXB, sulfur oxidation 23.5 24 0.00081 37.4 1.1 36 219-260 126-166 (562)
391 2oo2_A Hypothetical protein AF 23.0 1.2E+02 0.0041 23.2 4.7 33 29-61 29-61 (86)
392 3mcx_A SUSD superfamily protei 22.7 1.4E+02 0.0046 30.6 6.8 30 102-131 202-231 (477)
393 2pmr_A Uncharacterized protein 22.4 1.2E+02 0.0042 23.2 4.7 26 33-58 37-62 (87)
394 3myv_A SUSD superfamily protei 21.8 1.4E+02 0.0048 30.3 6.7 46 52-97 165-219 (454)
395 3lew_A SUSD-like carbohydrate 20.9 1.6E+02 0.0054 30.3 6.9 48 84-131 174-232 (495)
396 3lew_A SUSD-like carbohydrate 20.8 1.8E+02 0.0062 29.9 7.3 30 68-97 203-232 (495)
397 2yhe_A SEC-alkyl sulfatase; hy 26.1 21 0.00072 38.7 0.0 49 72-120 465-513 (668)
398 3qfk_A Uncharacterized protein 20.5 75 0.0026 33.1 4.3 40 484-528 62-111 (527)
399 3kez_A Putative sugar binding 20.1 1.7E+02 0.0058 29.7 6.9 27 69-95 197-223 (461)
No 1
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=100.00 E-value=6e-78 Score=645.80 Aligned_cols=411 Identities=64% Similarity=1.116 Sum_probs=366.5
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
++.++++..+|..++++|+|++|+..|++|++++|+ +.+|.++|.+|.++|++++|++++++|++++|+++.+|+++|.
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 455667777778888888888888888888888884 7788888888888888888888888888888888888888888
Q ss_pred HHHHhcChHHHHHHHHHhhccCCCCcchhcccccc--hhhhhhh------------------------------------
Q psy11688 111 AYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTEC--NKIVKRM------------------------------------ 152 (546)
Q Consensus 111 ~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~--~~~l~~~------------------------------------ 152 (546)
+|..+|++++|++.|+++++++|++..++..++.+ +...+++
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 162 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDG 162 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCCCGGG
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccccccccccc
Confidence 88888888888888888888888877766666555 2211111
Q ss_pred --------------hhhhhchHHHHHHHHHHHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCC
Q psy11688 153 --------------QIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDN 218 (546)
Q Consensus 153 --------------~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~ 218 (546)
.....+++..+..++..+.+++..+|+++++..|...+++++||+||++.+|.++++..+.++..+
T Consensus 163 ~itl~~l~~lie~l~~~~~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~ 242 (477)
T 1wao_1 163 KVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETN 242 (477)
T ss_dssp SCCHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHCCCBTTB
T ss_pred cccHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcCCCCCcC
Confidence 113456677888899999999999999999998888889999999999999999999999887777
Q ss_pred CeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhhcchhhhhhhchHHHHHHHHHhhccccceeee
Q psy11688 219 PYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCI 298 (546)
Q Consensus 219 ~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~lP~~~~~ 298 (546)
.++|+|||||||++|.||+.+++++++.+|.+|++||||||.+.++..|||.+++..+|+..+|+.+.++|++||+++++
T Consensus 243 ~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~ 322 (477)
T 1wao_1 243 PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCI 322 (477)
T ss_dssp CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCTTHHHHHHHHHTTSCSEEEE
T ss_pred eEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhhHHHHHHHHHHhccCCcEEEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEeCCccCCCCCChhhhhccCCCCCCCCchhhhhhhcCCCCCCCCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEE
Q psy11688 299 NNKVLVMHGGLFSSDNVTLEDIRTIDRNRQPPDEGLMCELLWSDPQIPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYII 378 (546)
Q Consensus 299 ~~~~~~vHgGi~~~~~~~~~~i~~~~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ii 378 (546)
+++++|||||+++|...++++|+++.|+.+++.++.++|+|||||....+|.+++||.|+.||++++++||+++|+++||
T Consensus 323 ~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ii 402 (477)
T 1wao_1 323 NGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYII 402 (477)
T ss_dssp TTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSSHHHHHHHCEECSSSSCEECTTSSSEEECHHHHHHHHHHTTCCEEE
T ss_pred cCcEEEECCCCCccccCCHHHHHhccCCCCCchhhhhhhhccCCCCccCCcCcCCCCCceeECHHHHHHHHHHcCCeEEE
Confidence 99999999999888889999999999999999999999999999999889999999999999999999999999999999
Q ss_pred EeccccccCceEeCCCeEEEEeCCCCCCCCCCCceeEEEeeCCCCceeEEEEeecCCCCCCCCc
Q psy11688 379 RSHEVKQDGYEVAHDGRCITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEAVGVSPPEPAL 442 (546)
Q Consensus 379 r~H~~~~~G~~~~~~~~~itifsa~~y~~~~~n~~a~~~~~~~~~~~~~~~~~~~~~~~~~p~l 442 (546)
||||++++||+++++++|||||||||||+.++|.||||.|++++++++|++|+++|+|.++|+-
T Consensus 403 r~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (477)
T 1wao_1 403 RSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMA 466 (477)
T ss_dssp ECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCEEEEEEEETTEEEEEEEEECCCCCCSCCTTC
T ss_pred ECCCCCcCCeEEecCCeEEEEeCCcccccCCCccEEEEEEECCCCeEEEEEEeCCCCCCCChhh
Confidence 9999999999999999999999999999999999999999778899999999999999998864
No 2
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=100.00 E-value=4.4e-71 Score=548.91 Aligned_cols=299 Identities=64% Similarity=1.143 Sum_probs=286.3
Q ss_pred cchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeee
Q psy11688 144 ECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFN 223 (546)
Q Consensus 144 ~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~l 223 (546)
.+...++..+.++.+++.++..++.++++++.++|+++++..|...+++++||+||++.+|.++|+..+.++..+.++|+
T Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vfl 94 (315)
T 3h63_A 15 FMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFN 94 (315)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEE
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEe
Confidence 44555667777888999999999999999999999999999998889999999999999999999999998777779999
Q ss_pred ccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhhcchhhhhhhchHHHHHHHHHhhccccceeeecceEE
Q psy11688 224 GDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCINNKVL 303 (546)
Q Consensus 224 GD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~lP~~~~~~~~~~ 303 (546)
|||||||++|.|++.+++++++.+|+++++||||||.+.++..|||.+|+..+|+..+|+.+.++|++||++++++++++
T Consensus 95 GD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~~~l~~~~~~~f~~LPla~ii~~~il 174 (315)
T 3h63_A 95 GDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVL 174 (315)
T ss_dssp SCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCHHHHHHHHHHHTTSCSEEEETTTEE
T ss_pred CCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHhhhHHHHHHHHHHhcCCcEEEEcCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCccCCCCCChhhhhccCCCCCCCCchhhhhhhcCCCCCCCCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEEEeccc
Q psy11688 304 VMHGGLFSSDNVTLEDIRTIDRNRQPPDEGLMCELLWSDPQIPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEV 383 (546)
Q Consensus 304 ~vHgGi~~~~~~~~~~i~~~~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~ 383 (546)
|||||+++|...++++|++++|+.+++.+++++|+|||||....+|.+++||.|+.||++++++||++||+++||||||+
T Consensus 175 ~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g~~~dllWsDP~~~~g~~~s~RG~g~~fg~~~~~~fl~~n~l~~iiR~Hq~ 254 (315)
T 3h63_A 175 IMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEV 254 (315)
T ss_dssp ECSSCCCSSTTCCHHHHHHCCCSSCCCSSSHHHHHHHCEECSSSSEEECTTSSSEEECHHHHHHHHHHHTCSEEEECCSC
T ss_pred EeCCCCCCcccCCHHHHHhCcccccccccchhhhheecCCCCCCCcCcCCCCceEEECHHHHHHHHHHcCCcEEEEecee
Confidence 99999988899999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred cccCceEeCCCeEEEEeCCCCCCCCCCCceeEEEeeCCCCceeEEEEeecCCCCCCCCc
Q psy11688 384 KQDGYEVAHDGRCITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEAVGVSPPEPAL 442 (546)
Q Consensus 384 ~~~G~~~~~~~~~itifsa~~y~~~~~n~~a~~~~~~~~~~~~~~~~~~~~~~~~~p~l 442 (546)
+++||+++++++|||||||||||+.++|.||+|.|++++++++|+||+++|+|+++||.
T Consensus 255 ~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~~~~~~~~~~~~~~~f~~~~~~~~~p~~ 313 (315)
T 3h63_A 255 KAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMA 313 (315)
T ss_dssp CTTSEEEEGGGTEEEECCCTTGGGTSCCCEEEEEEETTEEEEEEEEECCCCCCSCCTTT
T ss_pred ecCCeEEecCCeEEEEECCcccCCCCCccEEEEEEECCCCeEeeEEEecCCCCCCCCcC
Confidence 99999999999999999999999999999999999777899999999999999999974
No 3
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-70 Score=543.86 Aligned_cols=298 Identities=47% Similarity=0.800 Sum_probs=280.7
Q ss_pred chhhh-hhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccc--cccccccccccchhHhhHHHHHHHhCCCCCCCCee
Q psy11688 145 CNKIV-KRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVE--DEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYL 221 (546)
Q Consensus 145 ~~~~l-~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~--~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~ 221 (546)
+...+ ++.+.++.+++.++..++.++++++.++|+++++..| .+.+++++|||||++.+|.++|+..+.++..+.++
T Consensus 17 ~~~~i~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~v 96 (335)
T 3icf_A 17 ISKMVNDLFLKGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYL 96 (335)
T ss_dssp HHHHHHHTGGGTCCCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEE
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEE
Confidence 34445 5555667889999999999999999999999999988 77889999999999999999999999987766799
Q ss_pred eeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhhcchhhhhhhchHHHHHHHHHhhccccceeeecce
Q psy11688 222 FNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCINNK 301 (546)
Q Consensus 222 ~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~lP~~~~~~~~ 301 (546)
|+|||||||++|+||+.+++++++.+|+++++||||||.+.++..|||.+|+..+|+..+|+.+.++|++||++++++++
T Consensus 97 flGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~~~l~~~~~~~f~~LPlaaii~~~ 176 (335)
T 3icf_A 97 FNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYSQRIFNMFAQSFESLPLATLINND 176 (335)
T ss_dssp ECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCHHHHHHHHHHHTTSCSEEEETTT
T ss_pred EeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhccHHHHHHHHHHHhhcceeEEEcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCccCCCCCChhhhhccCCCCCCCCchhhhhhhcCCCCCCCCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEEEec
Q psy11688 302 VLVMHGGLFSSDNVTLEDIRTIDRNRQPPDEGLMCELLWSDPQIPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSH 381 (546)
Q Consensus 302 ~~~vHgGi~~~~~~~~~~i~~~~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H 381 (546)
++|||||+++|...++++|+.++|+.+++.+++++|+|||||....+|.+++||.|+.||++++++||++|++++|||||
T Consensus 177 il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g~~~dlLWSDP~~~~g~~~s~RG~g~~FG~~~~~~fl~~n~l~~IiR~H 256 (335)
T 3icf_A 177 YLVMHGGLPSDPSATLSDFKNIDRFAQPPRDGAFMELLWADPQEANGMGPSQRGLGHAFGPDITDRFLRNNKLRKIFRSH 256 (335)
T ss_dssp EEECSSCCCSCTTCCHHHHHTCCCSSCCCSSSHHHHHHHCEECSSSSEEECCCC--EEECHHHHHHHHHHTTCSEEEECS
T ss_pred EEEecCCcCCCccCCHHHHHhCccccccccccchhhhhccCCCCcCCcccCCCCCceeeCHHHHHHHHHHCCCeEEEEcC
Confidence 99999999889999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred cccccCceEeCCCeEEEEeCCCCCCCCCCCceeEEEeeCC----------CCceeEEEEeecCCCCCCCCc
Q psy11688 382 EVKQDGYEVAHDGRCITVFSAPNYCDSVGNKGAFITMKGK----------DMVPHFTTYEAVGVSPPEPAL 442 (546)
Q Consensus 382 ~~~~~G~~~~~~~~~itifsa~~y~~~~~n~~a~~~~~~~----------~~~~~~~~~~~~~~~~~~p~l 442 (546)
|++++||+++++++|||||||||||+.++|.||||.|+.+ +++++|+||+++|+|.++||.
T Consensus 257 q~~~~Gy~~~~~~~liTvfSapnYc~~~~N~~a~~~i~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~p~~ 327 (335)
T 3icf_A 257 ELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQNLIIETFEAVEHPDIKPMA 327 (335)
T ss_dssp SCCTEEEEEEGGGTEEEECCCTTGGGTSCCEEEEEEECTTCCCCBTTTBCCTTEEEEEECCCCCCSCCTTT
T ss_pred ceecCeEEEecCCcEEEEECCcccCCCCCCceEEEEEecccccccccccccCceeEEEEecCCCCCCCchh
Confidence 9999999999999999999999999999999999999543 789999999999999999885
No 4
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=100.00 E-value=4.5e-67 Score=524.92 Aligned_cols=303 Identities=36% Similarity=0.686 Sum_probs=276.6
Q ss_pred cchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeee
Q psy11688 144 ECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFN 223 (546)
Q Consensus 144 ~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~l 223 (546)
.+...++....++.++++++..++.++++++.++|+++++..+ ++++||+||++.+|.++++..+.++. +.++|+
T Consensus 29 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~p----i~ViGDIHG~~~dL~~ll~~~g~~~~-~~~vfL 103 (357)
T 3ll8_A 29 RVDILKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAP----VTVCGDIHGQFFDLMKLFEVGGSPAN-TRYLFL 103 (357)
T ss_dssp CHHHHHHHHHTTCCBCHHHHHHHHHHHHHHHHTSCSEEEECSS----EEEECCCTTCHHHHHHHHHHHCCTTT-CCEEEC
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCCCeEEeccc----ceeeccCCCCHHHHHHHHHhcCCCCC-cEEEEC
Confidence 3455566666788899999999999999999999999999866 99999999999999999999888755 469999
Q ss_pred ccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhhcchhhhhhhchHHHHHHHHHhhccccceeeecceEE
Q psy11688 224 GDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCINNKVL 303 (546)
Q Consensus 224 GD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~lP~~~~~~~~~~ 303 (546)
|||||||++|+|++.++++++..+|+++++||||||.+.++..|||.+|+..+|+..+|+.+.++|++||++++++++++
T Consensus 104 GD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~~~l~~~~~~~f~~LPlaaii~~~il 183 (357)
T 3ll8_A 104 GDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFL 183 (357)
T ss_dssp SCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCHHHHHHHHHHHHTSCSEEEETTTEE
T ss_pred CCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccchhHHHHHHHHHHhCCcceEEcccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCccCCCCCChhhhhccCCCCCCCCchhhhhhhcCCCCCCCC-------CC-CCCCCCeeeeCHHHHHHHHHhcCCc
Q psy11688 304 VMHGGLFSSDNVTLEDIRTIDRNRQPPDEGLMCELLWSDPQIPNG-------RA-PSKRGVGVHFGPDVTKAFLERNKLE 375 (546)
Q Consensus 304 ~vHgGi~~~~~~~~~~i~~~~r~~~~~~~~~~~dllWsdp~~~~~-------~~-~~~rg~~~~fg~~~~~~fl~~~~~~ 375 (546)
|||||+ +|...++++|++++|+.++|..+.++|+|||||....+ |. +++||.|+.||++++++||++|+++
T Consensus 184 ~vHGGl-sp~l~~ld~I~~i~R~~e~p~~g~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~ 262 (357)
T 3ll8_A 184 CVHGGL-SPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLL 262 (357)
T ss_dssp ECSSCC-CTTCCSHHHHHTCCCSSCCCSSSHHHHHHHCEECTTTTSCSCCCSEEECTTTTSSEEECHHHHHHHHHHTTCS
T ss_pred EEecCc-CcccCCHHHHhhccccccCCccCchhHhhccCccccccccccccccccCCCCCCceEEChHHHHHHHHHCCCe
Confidence 999999 89999999999999999999999999999999987644 32 5789999999999999999999999
Q ss_pred EEEEeccccccCceEeCCC------eEEEEeCCCCCCCCCCCceeEEEeeCCCCceeEEEEeecCCCCCCCCccch-hhh
Q psy11688 376 YIIRSHEVKQDGYEVAHDG------RCITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEAVGVSPPEPALEND-KVT 448 (546)
Q Consensus 376 ~iir~H~~~~~G~~~~~~~------~~itifsa~~y~~~~~n~~a~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~ 448 (546)
+||||||++++||++++++ +|||||||||||+.++|+||+|.|+. + ..+|.||+++|||++.|...+. +-+
T Consensus 263 ~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~~a~l~~~~-~-~~~~~~f~~~~hp~~~p~~~~~f~ws 340 (357)
T 3ll8_A 263 SILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYEN-N-VMNIRQFNCSPHPYWLPNFMDVFTWS 340 (357)
T ss_dssp EEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCCEEEEEEET-T-EEEEEEECCCCCCCCCGGGCCHHHHH
T ss_pred EEEEeccccccceEEecCCcCCCCCcEEEEECCCccCCCCCccEEEEEEEC-C-cceEEEecCCCCCCcCCCcceeeEec
Confidence 9999999999999999886 79999999999999999999999943 3 4789999999999998887654 235
Q ss_pred hhhhhh
Q psy11688 449 LKFMTD 454 (546)
Q Consensus 449 ~~~l~~ 454 (546)
.+|+.+
T Consensus 341 ~p~~~~ 346 (357)
T 3ll8_A 341 LPFVGE 346 (357)
T ss_dssp HHHHHH
T ss_pred HhhHHH
Confidence 555433
No 5
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=100.00 E-value=3e-66 Score=510.60 Aligned_cols=269 Identities=40% Similarity=0.811 Sum_probs=258.0
Q ss_pred hchHHHHHHHHHHHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHH
Q psy11688 157 KLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVEC 236 (546)
Q Consensus 157 ~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~ 236 (546)
.+++.++..++.++++++.++|+++++..+ ++++||+||++.+|.++++..+.++.. .++|+|||||||++|.|+
T Consensus 28 ~l~~~~~~~l~~~~~~il~~ep~ll~~~~~----i~viGDIHG~~~~L~~ll~~~g~~~~~-~~vfLGD~VDrG~~s~ev 102 (299)
T 3e7a_A 28 QLTENEIRGLCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPES-NYLFLGDYVDRGKQSLET 102 (299)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSCSEEEECSS----EEEECBCTTCHHHHHHHHHHHCSTTSS-CEEECSCCSSSSSCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeeecCCC----EEEEecCCCCHHHHHHHHHHhCCCCCc-cEEeCCcccCCCCCcHHH
Confidence 367789999999999999999999999876 999999999999999999999988654 599999999999999999
Q ss_pred HHHHhhhhhcCCCeEEEEccccccchhhhhhcchhhhhhhchHHHHHHHHHhhccccceeeecceEEEEeCCccCCCCCC
Q psy11688 237 IFTLFGFKLLYPNHFFMARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCINNKVLVMHGGLFSSDNVT 316 (546)
Q Consensus 237 l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~lP~~~~~~~~~~~vHgGi~~~~~~~ 316 (546)
+.+++++|..+|+++++||||||.+.++..|||.+|+..+|+..+|+.+.++|++||++++++++++|||||+ ||+..+
T Consensus 103 l~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~~~l~~~~~~~f~~LPlaaii~~~il~vHGGl-sp~~~~ 181 (299)
T 3e7a_A 103 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGL-SPDLQS 181 (299)
T ss_dssp HHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCHHHHHHHHHHHTTCCCEEEETTTEEEESSCC-CTTCCC
T ss_pred HHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHhhHHHHHHHHHHHhhCCceEEECCeEEEEcCcc-CcccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred hhhhhccCCCCCCCCchhhhhhhcCCCCC-CCCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEEEeccccccCceEeCCCe
Q psy11688 317 LEDIRTIDRNRQPPDEGLMCELLWSDPQI-PNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVKQDGYEVAHDGR 395 (546)
Q Consensus 317 ~~~i~~~~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~ 395 (546)
+++|++++|+.++|.+++++|+|||||.. ..+|.+++||.|+.||++++++||++|++++||||||++++||+++++++
T Consensus 182 l~~i~~i~R~~~~p~~~~~~dllWsDP~~~~~~~~~~~RG~~~~fG~~~~~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~ 261 (299)
T 3e7a_A 182 MEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQ 261 (299)
T ss_dssp THHHHTCCSSCCCCSSSHHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEETTTT
T ss_pred HHHHHhccCCCcCCcchhhhhhhcCCccccccCcccCCCCcceeeCHHHHHHHHHHCCCeEEEEcCeeeecceEEecCCe
Confidence 99999999999999999999999999985 57899999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCCCCCceeEEEeeCCCCceeEEEEee
Q psy11688 396 CITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEA 432 (546)
Q Consensus 396 ~itifsa~~y~~~~~n~~a~~~~~~~~~~~~~~~~~~ 432 (546)
|||||||||||+.++|.||+|.| ++++.++|++|++
T Consensus 262 ~iTvfSapnY~~~~~N~~a~l~~-~~~~~~~~~~~~~ 297 (299)
T 3e7a_A 262 LVTLFSAPNYCGEFDNAGAMMSV-DETLMCSFQILKP 297 (299)
T ss_dssp EEEEBCCSSGGGTCCCCEEEEEE-CTTCCEEEEEECC
T ss_pred EEEEECCcccCCCCCccEEEEEE-CCCCcEEEEEecC
Confidence 99999999999999999999999 7899999999875
No 6
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=100.00 E-value=6.9e-63 Score=512.01 Aligned_cols=291 Identities=37% Similarity=0.704 Sum_probs=268.1
Q ss_pred chhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeec
Q psy11688 145 CNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNG 224 (546)
Q Consensus 145 ~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lG 224 (546)
+...++.......+++.++..++.++.+++.++|+++++..+ ++++|||||++.+|.++|+..+.++ .+.|+|+|
T Consensus 43 ~d~l~~~~~~~~~l~~~~i~~L~~~a~~il~~Ep~ll~l~~p----I~VIGDIHGq~~dL~~LL~~~g~p~-~d~yVFLG 117 (521)
T 1aui_A 43 VDILKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAP----VTVCGDIHGQFFDLMKLFEVGGSPA-NTRYLFLG 117 (521)
T ss_dssp HHHHHHHHHTTCCBCHHHHHHHHHHHHHHHHTSCSEEEECSS----EEEECCCTTCHHHHHHHHHHHCCTT-TCCEEECS
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCCCeEeeccc----eeeccCCCCCHHHHHHHHHhcCCCC-cceEEEcC
Confidence 344455555677899999999999999999999999998866 9999999999999999999888765 45699999
Q ss_pred cccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhhcchhhhhhhchHHHHHHHHHhhccccceeeecceEEE
Q psy11688 225 DFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCINNKVLV 304 (546)
Q Consensus 225 D~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~lP~~~~~~~~~~~ 304 (546)
||||||++|.||+.+|+++++.+|+++++||||||.+.++..|||.+|+..+|+..+|+.+.++|++||++++++++++|
T Consensus 118 DyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~~~l~~~~~~~f~~LPlaaii~~~il~ 197 (521)
T 1aui_A 118 DYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLC 197 (521)
T ss_dssp CCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCHHHHHHHHHHHTTSCCEEEETTTEEE
T ss_pred CcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhhhHHHHHHHHHHHhCCceEEecCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCccCCCCCChhhhhccCCCCCCCCchhhhhhhcCCCCCCCC-------CCC-CCCCCeeeeCHHHHHHHHHhcCCcE
Q psy11688 305 MHGGLFSSDNVTLEDIRTIDRNRQPPDEGLMCELLWSDPQIPNG-------RAP-SKRGVGVHFGPDVTKAFLERNKLEY 376 (546)
Q Consensus 305 vHgGi~~~~~~~~~~i~~~~r~~~~~~~~~~~dllWsdp~~~~~-------~~~-~~rg~~~~fg~~~~~~fl~~~~~~~ 376 (546)
||||+ +|.+.++++|++++|+.+++..++++|+|||||....+ |.+ +.||.|+.||++++++||++||+++
T Consensus 198 VHGGl-sP~~~sld~I~~I~R~~e~p~~g~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g~~FG~d~v~~FL~~n~l~l 276 (521)
T 1aui_A 198 VHGGL-SPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLS 276 (521)
T ss_dssp ESSCC-CTTCCSHHHHHHSCCSSSCCSSSHHHHHHHCEECTTTTSCSSCCCEEECTTTTSSEEECHHHHHHHHHHTTCSE
T ss_pred ECCCc-CcccCCHHHhhhccCCcCCCccchhhhheecCccccccccccCcceecccCCCcccccCHHHHHHHHHHcCCcE
Confidence 99999 99999999999999999999999999999999987533 444 4799999999999999999999999
Q ss_pred EEEeccccccCceEeCCC------eEEEEeCCCCCCCCCCCceeEEEeeCCCCceeEEEEeecCCCCCCCCcc
Q psy11688 377 IIRSHEVKQDGYEVAHDG------RCITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEAVGVSPPEPALE 443 (546)
Q Consensus 377 iir~H~~~~~G~~~~~~~------~~itifsa~~y~~~~~n~~a~~~~~~~~~~~~~~~~~~~~~~~~~p~l~ 443 (546)
||||||++++||++++++ +|||||||||||+.++|.||||.|++ + .++|.+|+++|+|.+.|...
T Consensus 277 IIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N~gAvl~i~~-~-~~~~~~f~~~~~p~~~P~~~ 347 (521)
T 1aui_A 277 ILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYEN-N-VMNIRQFNCSPHPYWLPNFM 347 (521)
T ss_dssp EEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEET-T-EEEEEEECCCCCCCCCGGGC
T ss_pred EEEccchhccceeeecCCcCCCCCeEEEEeCCcccCCCCCceEEEEEEeC-C-cceEEEecCCCCCCcCcccc
Confidence 999999999999999987 59999999999999999999999944 4 68999999999999988754
No 7
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=100.00 E-value=3.4e-62 Score=487.52 Aligned_cols=283 Identities=35% Similarity=0.696 Sum_probs=263.8
Q ss_pred hhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccc
Q psy11688 147 KIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDF 226 (546)
Q Consensus 147 ~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~ 226 (546)
..+++......+++.++..++.++++++.++|+++++..+ ++++||+||++.+|.++|+..+.++.. .++|+|||
T Consensus 12 ~~i~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~~~~~----i~viGDIHG~~~~L~~ll~~~~~~~~~-~~vflGD~ 86 (309)
T 2ie4_C 12 QWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCP----VTVCGDVHGQFHDLMELFRIGGKSPDT-NYLFMGDY 86 (309)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHHHSCTTEEECSS----EEEECCCTTCHHHHHHHHHHHCCTTTS-CEEECSCC
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCEEeccCC----EEEEecCCCCHHHHHHHHHHcCCCCCC-EEEEeCCc
Confidence 3444444556788999999999999999999999998765 999999999999999999999887654 59999999
Q ss_pred cccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhhcchhhhhhhch-HHHHHHHHHhhccccceeeecceEEEE
Q psy11688 227 VDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYGFEGEVKSKYT-DLMAQFFTEVYNWLPLCHCINNKVLVM 305 (546)
Q Consensus 227 vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~-~~~~~~~~~~~~~lP~~~~~~~~~~~v 305 (546)
||||++|.|++.++++++..+|+++++||||||.+.++..|||.+|+..+|+ ..+|+.+.++|++||++++++++++||
T Consensus 87 VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~~l~~~~~~~~~~LPl~~~i~~~il~v 166 (309)
T 2ie4_C 87 VDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCL 166 (309)
T ss_dssp SSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSSTHHHHHHHHHTTSSCSCEEETTTEEEC
T ss_pred cCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccHHHHHHHHHHHHhCCceEEEcCcEEEE
Confidence 9999999999999999999999999999999999999999999999999995 579999999999999999999999999
Q ss_pred eCCccCCCCCChhhhhccCCCCCCCCchhhhhhhcCCCCCCCCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEEEeccccc
Q psy11688 306 HGGLFSSDNVTLEDIRTIDRNRQPPDEGLMCELLWSDPQIPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVKQ 385 (546)
Q Consensus 306 HgGi~~~~~~~~~~i~~~~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~ 385 (546)
|||+ +|...++++|++++|+.+.+.++.++|+|||||....+|.+++||.|+.||++++++||++||+++||||||+++
T Consensus 167 HgGl-~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~s~RG~g~~fG~~~~~~fl~~n~l~~iir~Hq~~~ 245 (309)
T 2ie4_C 167 HGGL-SPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVM 245 (309)
T ss_dssp SSCC-CTTCCSHHHHHTSCCSSCCCSSSHHHHHHHCEECSSSSEEECTTSSSEEECHHHHHHHHHHTTCSEEEECCSCCT
T ss_pred CCCC-CCcccCHHHHHhhcccccCChhHHHHHHhhCCCccccccccCCCCcccccCHHHHHHHHHHcCCeEEEecCccee
Confidence 9999 899999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred cCceEeCCCeEEEEeCCCCCCCCCCCceeEEEeeCCCCceeEEEEeecCCC
Q psy11688 386 DGYEVAHDGRCITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEAVGVS 436 (546)
Q Consensus 386 ~G~~~~~~~~~itifsa~~y~~~~~n~~a~~~~~~~~~~~~~~~~~~~~~~ 436 (546)
+||++.++++|||||||||||+.++|.||+|.| +++++++|++|+++|++
T Consensus 246 ~G~~~~~~~~~iTvfSa~ny~~~~~N~~a~l~i-~~~~~~~~~~~~~~~~~ 295 (309)
T 2ie4_C 246 EGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMEL-DDTLKYSFLQFDPAPRR 295 (309)
T ss_dssp EEEEEETTTTEEEECCCSSGGGTSCCEEEEEEE-CTTCCEEEEEECCCC--
T ss_pred CCEEEecCCeEEEEECCcccccCCCCeEEEEEE-CCCCcEeEEEEeCCCCc
Confidence 999999999999999999999999999999999 77899999999988765
No 8
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=100.00 E-value=1e-60 Score=479.47 Aligned_cols=272 Identities=40% Similarity=0.802 Sum_probs=257.9
Q ss_pred hchHHHHHHHHHHHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHH
Q psy11688 157 KLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVEC 236 (546)
Q Consensus 157 ~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~ 236 (546)
.+++.++..++.++.+++.++|+++++..+ ++++||+||++.+|.++|+..++++. +.++|+|||||||++|+||
T Consensus 29 ~l~~~~~~~l~~~~~~il~~e~~l~~~~~~----i~viGDIHG~~~~L~~ll~~~g~~~~-~~~vflGD~VDRG~~s~ev 103 (330)
T 1fjm_A 29 QLTENEIRGLCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPE-SNYLFLGDYVDRGKQSLET 103 (330)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSCSEEEECSS----EEEECBCTTCHHHHHHHHHHHCSTTS-SCEEECSCCSSSSSCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEeecCc----eEEecCCCCCHHHHHHHHHHhCCCCc-ceEEeCCCcCCCCCChHHH
Confidence 477889999999999999999999998866 99999999999999999999998765 4599999999999999999
Q ss_pred HHHHhhhhhcCCCeEEEEccccccchhhhhhcchhhhhhhchHHHHHHHHHhhccccceeeecceEEEEeCCccCCCCCC
Q psy11688 237 IFTLFGFKLLYPNHFFMARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCINNKVLVMHGGLFSSDNVT 316 (546)
Q Consensus 237 l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~lP~~~~~~~~~~~vHgGi~~~~~~~ 316 (546)
+.+|++++..+|+++++||||||.+.++..|||.+|+..+|+..+|+.+.++|++||++++++++++|||||+ +|.+.+
T Consensus 104 l~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPl~~~i~~~i~~vHgGl-~p~~~~ 182 (330)
T 1fjm_A 104 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGL-SPDLQS 182 (330)
T ss_dssp HHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCHHHHHHHHHHHTTCCCEEEETTTEEEESSCC-CTTCSC
T ss_pred HHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhccHHHHHHHHHHHHhCCceEEEcCcEEEEccCC-CcccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred hhhhhccCCCCCCCCchhhhhhhcCCCCCC-CCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEEEeccccccCceEeCCCe
Q psy11688 317 LEDIRTIDRNRQPPDEGLMCELLWSDPQIP-NGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVKQDGYEVAHDGR 395 (546)
Q Consensus 317 ~~~i~~~~r~~~~~~~~~~~dllWsdp~~~-~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~ 395 (546)
+++++.+.|+.+.++.++++|+|||||... .+|.++.||.++.||++++.+||+++++++||||||++++||+++++++
T Consensus 183 l~qi~~i~r~~e~~~~g~~~dlLWsdp~~~~~~w~~~~rG~~~~fG~~~~~~fl~~~~l~liir~Hq~v~~Gy~~~~~~~ 262 (330)
T 1fjm_A 183 MEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQ 262 (330)
T ss_dssp HHHHHHCCSSCCCCSSSHHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEETTTT
T ss_pred HHHHhhhhcCccCcccchHHHHHhcCCccccCCcCcccCCCceeeChHHHHHHHHhCCCceEecccccccCCeEEccCCe
Confidence 999999999999999999999999999864 6889999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCCCCCceeEEEeeCCCCceeEEEEeecCC
Q psy11688 396 CITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEAVGV 435 (546)
Q Consensus 396 ~itifsa~~y~~~~~n~~a~~~~~~~~~~~~~~~~~~~~~ 435 (546)
|||||||||||+.++|.||+|.| ++++.++|++|.+.+.
T Consensus 263 lvTvfSapnY~~~~~N~ga~l~i-~~~~~~~~~~~~~~~~ 301 (330)
T 1fjm_A 263 LVTLFSAPNYCGEFDNAGAMMSV-DETLMCSFQILKPADK 301 (330)
T ss_dssp EEEEBCCTTCCSSSCCCEEEEEE-CTTCCEEEEEECCCC-
T ss_pred EEEEeCCcccccCCCCcEEEEEE-CCCCcEeEEEecCCcc
Confidence 99999999999999999999999 7789999999987653
No 9
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=100.00 E-value=8.7e-36 Score=303.84 Aligned_cols=221 Identities=19% Similarity=0.277 Sum_probs=176.7
Q ss_pred ccccccccccchhHhhHHHHHHHhCCCC-------CCCCeeeeccccccCCChHHHHHHHhhhhh---cCCCeEEEEccc
Q psy11688 188 EAKFTVCGDIHGQFYDLMNIFELNGLPS-------PDNPYLFNGDFVDRGSFSVECIFTLFGFKL---LYPNHFFMARGN 257 (546)
Q Consensus 188 ~~~~~viGDihg~~~~l~~il~~~~~~~-------~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~---~~p~~v~~lrGN 257 (546)
..+++++||+||++.+|.++++..+.++ ..+.++|+|||||||+++.+++.++.+++. .+|.+++++|||
T Consensus 70 ~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v~~v~GN 149 (342)
T 2z72_A 70 IKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGN 149 (342)
T ss_dssp CCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEEEECCCH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeEEEEecC
Confidence 3469999999999999999999987653 346799999999999999999999999986 789999999999
Q ss_pred cccchhhh-------hhcchhhhhhhchHHHHH---HHHHhhccccceeeecceEEEEeCCccCCCCC----Chhhhhcc
Q psy11688 258 HESAYMNQ-------IYGFEGEVKSKYTDLMAQ---FFTEVYNWLPLCHCINNKVLVMHGGLFSSDNV----TLEDIRTI 323 (546)
Q Consensus 258 HE~~~~~~-------~~~~~~e~~~~~~~~~~~---~~~~~~~~lP~~~~~~~~~~~vHgGi~~~~~~----~~~~i~~~ 323 (546)
||.+.++. .|++..++.......+|. ...+|+..||++++++ +++|||||+ +|... ++++|+.+
T Consensus 150 HE~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl-~p~~~~~~~~l~~i~~~ 227 (342)
T 2z72_A 150 HEQMVLGGDLRYVHQRYDIATTLINRPYNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGI-SSEWISRELTLDKANAL 227 (342)
T ss_dssp HHHHHHHTCCTTSCTTHHHHHHHTTSCGGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCC-CHHHHHTTCCHHHHHHH
T ss_pred CcHHHhhCcccccccccchHHHHhcccHHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCC-ChhhcccCCCHHHHHHH
Confidence 99998864 233333332222233432 4567888889999988 799999999 66543 88999888
Q ss_pred CCCC-----CCCCchhhhhhhcCCCCCCCCCCCCCCCC-eeeeCHHHHHHHHHhcCCcEEEEeccccccCceEeCCCeEE
Q psy11688 324 DRNR-----QPPDEGLMCELLWSDPQIPNGRAPSKRGV-GVHFGPDVTKAFLERNKLEYIIRSHEVKQDGYEVAHDGRCI 397 (546)
Q Consensus 324 ~r~~-----~~~~~~~~~dllWsdp~~~~~~~~~~rg~-~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~~~~i 397 (546)
.|+. +++.++...+++|+||.. .| .||. +..||++++++||+.+++++|||||++++. +...+++++|
T Consensus 228 ~r~~~~~~~~~~~~~~~~~~lwsd~~~--~w---~R~~~~~~fg~~~~~~fl~~~~~~~IV~GHt~~~~-~~~~~~~~~i 301 (342)
T 2z72_A 228 YRANVDASKKSLKADDLLNFLFFGNGP--TW---YRGYFSETFTEAELDTILQHFNVNHIVVGHTSQER-VLGLFHNKVI 301 (342)
T ss_dssp HHHHTTSCHHHHHHSHHHHHHHSTTST--TT---CCGGGSTTCCHHHHHHHHHHHTCSEEEECSSCCSS-CEEETTTTEE
T ss_pred hhhhccccccccccCHHHHhccCCCCC--CC---cCCcccccCChHHHHHHHHHCCCcEEEECCCcccc-hhhhcCCCEE
Confidence 7752 112235678999999864 23 4666 567999999999999999999999999865 6677899999
Q ss_pred EEeCCCCCCCCCCCceeEEEeeC
Q psy11688 398 TVFSAPNYCDSVGNKGAFITMKG 420 (546)
Q Consensus 398 tifsa~~y~~~~~n~~a~~~~~~ 420 (546)
||||+++| +|.++++.|++
T Consensus 302 ~Idsg~~~----gg~la~l~i~~ 320 (342)
T 2z72_A 302 AVDSSIKV----GKSGELLLLEN 320 (342)
T ss_dssp ECCCCGGG----SSCCCEEEEET
T ss_pred EEECCCCC----CCcEEEEEEEC
Confidence 99999998 47899999954
No 10
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.95 E-value=3.9e-29 Score=247.15 Aligned_cols=195 Identities=17% Similarity=0.285 Sum_probs=159.2
Q ss_pred ccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhhcc
Q psy11688 190 KFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYGF 269 (546)
Q Consensus 190 ~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~ 269 (546)
+++++||+||++.+|.++++..+.++..+.++|+|||||||+++.+++.++.++ |.++++|+||||.+.++..+|+
T Consensus 2 ~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l----~~~~~~v~GNHe~~~l~~~~g~ 77 (280)
T 2dfj_A 2 ATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSL----GDSVRLVLGNHDLHLLAVFAGI 77 (280)
T ss_dssp CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHT----GGGEEECCCHHHHHHHHHHTTS
T ss_pred eEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhC----CCceEEEECCCcHHHHhHhcCC
Confidence 378999999999999999999988656678999999999999999999999887 3589999999999999999888
Q ss_pred hhhhhhhc-----hHHHHHHHHHhhccccceeeecc-eEEEEeCCccCCCCCChhhhhccCCCCC----CCCchhhhhhh
Q psy11688 270 EGEVKSKY-----TDLMAQFFTEVYNWLPLCHCINN-KVLVMHGGLFSSDNVTLEDIRTIDRNRQ----PPDEGLMCELL 339 (546)
Q Consensus 270 ~~e~~~~~-----~~~~~~~~~~~~~~lP~~~~~~~-~~~~vHgGi~~~~~~~~~~i~~~~r~~~----~~~~~~~~dll 339 (546)
........ .......+.++++.||+++.+++ +++|||||+ +|.+ +++++..+.|+.+ .++...+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi-~p~~-~l~~~~~~~r~~e~~l~~~~~~~~~~~l 155 (280)
T 2dfj_A 78 SRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGI-TPQW-DLQTAKECARDVEAVLSSDSYPFFLDAM 155 (280)
T ss_dssp SCCCGGGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCC-CTTC-CHHHHHHHHHHHHHHHHSTTHHHHHHHT
T ss_pred cccchhhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCC-CcCc-CHHHHHHHHHHHHHhhcCCcHHHHHHHh
Confidence 64321111 12234566788999999998887 899999999 7776 7888887776532 34556788999
Q ss_pred cCCCCCCCCCCCCCCCCe-eeeCHHH--HHHHHHhcC-CcEEEEec-cccccCceEeC
Q psy11688 340 WSDPQIPNGRAPSKRGVG-VHFGPDV--TKAFLERNK-LEYIIRSH-EVKQDGYEVAH 392 (546)
Q Consensus 340 Wsdp~~~~~~~~~~rg~~-~~fg~~~--~~~fl~~~~-~~~iir~H-~~~~~G~~~~~ 392 (546)
|+||. ..|.++.||.+ +.||.++ ..+||+.+| +++++|+| +.+++||...+
T Consensus 156 ~~d~~--~~w~~~~~G~~r~~~~~~~~tr~rf~~~~g~l~~~~r~~~~~~~~g~~~w~ 211 (280)
T 2dfj_A 156 YGDMP--NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWF 211 (280)
T ss_dssp TCSCC--CSCCTTCCHHHHHHHHHHHHHTCCEEETTBEEESSCCSCGGGCCSSCEEGG
T ss_pred cCCCC--CCcCCCCCCceeEEEeccHHHHHHHhhcCCcEeEEeccChhhcCccccchh
Confidence 99985 57889999988 7789888 477898888 88888888 77778877654
No 11
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.88 E-value=3e-23 Score=221.67 Aligned_cols=85 Identities=20% Similarity=0.188 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchh
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
+.++.++|.++.+.|+|++|++.|++|++++|++..+|.++|.+|..+|++++|++.|++|++++|++..++..++.++.
T Consensus 6 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 85 (477)
T 1wao_1 6 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 85 (477)
T ss_dssp HTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhh
Q psy11688 148 IVKRM 152 (546)
Q Consensus 148 ~l~~~ 152 (546)
..+++
T Consensus 86 ~~g~~ 90 (477)
T 1wao_1 86 ALGKF 90 (477)
T ss_dssp HHTCH
T ss_pred HcCCH
Confidence 88776
No 12
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.84 E-value=2.2e-20 Score=162.28 Aligned_cols=118 Identities=31% Similarity=0.515 Sum_probs=113.4
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR 107 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~ 107 (546)
.-+|+.+++++++|+.++++|+|++|+..|++|++++|+ +.+|+++|.+|.++|++++|+.+++++++++|+++.+|++
T Consensus 7 ~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 86 (126)
T 4gco_A 7 YINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIR 86 (126)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHH
Confidence 468999999999999999999999999999999999995 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccch
Q psy11688 108 RAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECN 146 (546)
Q Consensus 108 lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~ 146 (546)
+|.++..+|++++|+++|+++++++|++.+++..++.|.
T Consensus 87 lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 87 KAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999999999999999999988877664
No 13
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.80 E-value=7.7e-21 Score=186.44 Aligned_cols=209 Identities=18% Similarity=0.256 Sum_probs=132.8
Q ss_pred hhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEE
Q psy11688 174 FMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFM 253 (546)
Q Consensus 174 L~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~ 253 (546)
+..+|++..+. .+++++||+||++..+.++++..+..+..+.++++||++|||+++.+++.++.++ .+++
T Consensus 8 ~~~~~~l~~~~----~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~~------~~~~ 77 (262)
T 2qjc_A 8 YANVVTLPNVT----GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL------GAYS 77 (262)
T ss_dssp CCCEEECTTCC----SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHHHHHHHHHHH------TCEE
T ss_pred cCChhhhcCCC----CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHHHHHHHHHHC------CCEE
Confidence 44555555543 2499999999999999999999877655478999999999999999999988764 4899
Q ss_pred Eccccccchhhhhhcchhh-hhhhch---------HHHHHHHHHhhccccceeeec-ceEEEEeCCccCCCCC----Chh
Q psy11688 254 ARGNHESAYMNQIYGFEGE-VKSKYT---------DLMAQFFTEVYNWLPLCHCIN-NKVLVMHGGLFSSDNV----TLE 318 (546)
Q Consensus 254 lrGNHE~~~~~~~~~~~~e-~~~~~~---------~~~~~~~~~~~~~lP~~~~~~-~~~~~vHgGi~~~~~~----~~~ 318 (546)
++||||.+.++..+++..+ +...++ ..+.....++++.||+++.++ .+++|||||+ +|... ..+
T Consensus 78 v~GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~-~p~~~~~~~~~~ 156 (262)
T 2qjc_A 78 VLGNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGL-HPQRPVDRQYED 156 (262)
T ss_dssp CCCHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCC-CTTSCGGGCCHH
T ss_pred EeCcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCC-CCCCCcccCCHH
Confidence 9999999998877776543 222221 223355678899999999886 5899999999 55432 122
Q ss_pred hh---hccCCCCCCCCchhhhhhhcCCCCCC--CCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEEEeccccccCceEeCC
Q psy11688 319 DI---RTIDRNRQPPDEGLMCELLWSDPQIP--NGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVKQDGYEVAHD 393 (546)
Q Consensus 319 ~i---~~~~r~~~~~~~~~~~dllWsdp~~~--~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~~~~ 393 (546)
++ +.+.++.+.+..+. .++|+||... ..|..+.+ +.+.||-||+.+. ++....+
T Consensus 157 ~l~~ir~~~~~~~~~~~G~--~~~~~d~~~~~~~~w~~~~~------------------g~~~vvfGHt~~~-~~~~~~~ 215 (262)
T 2qjc_A 157 EVTTMRNLIEKEQEATGGV--TLTATEETNDGGKPWASMWR------------------GPETVVFGHDARR-GLQEQYK 215 (262)
T ss_dssp HHHHCCEEEEC-------C--CEEEESCSTTCCEEGGGGCC------------------CSSEEEECCCGGG-CCBCTTT
T ss_pred HHhhhhhcccccccCCCCc--cccccCCCCcCCCChhhccC------------------CCCEEEECCCccc-cccccCC
Confidence 33 22222211111222 3789987431 12222222 4567777887764 4433222
Q ss_pred CeEEEEeCCCCCCCCCCCceeEEEe
Q psy11688 394 GRCITVFSAPNYCDSVGNKGAFITM 418 (546)
Q Consensus 394 ~~~itifsa~~y~~~~~n~~a~~~~ 418 (546)
+.++.|-+..-| +..=+++.+
T Consensus 216 ~~~i~IDtG~~~----gG~Lt~l~l 236 (262)
T 2qjc_A 216 PLAIGLDSRCVY----GGRLSAAVF 236 (262)
T ss_dssp TTEEECCCBGGG----TSEEEEEEE
T ss_pred CCEEEeeCcccc----CCeeEEEEE
Confidence 256666655433 234566777
No 14
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=99.78 E-value=1e-19 Score=180.48 Aligned_cols=81 Identities=43% Similarity=0.732 Sum_probs=70.3
Q ss_pred hhCcchhhhHHHHHHHHHHhcCCCCCc-ceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC----cccccchh
Q psy11688 461 AQGKLHRKYAYRILMDIKKKKILNLDF-TQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC----IFTLFGFK 535 (546)
Q Consensus 461 ~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh----~~~~~gf~ 535 (546)
.+|||||+ ++.|.++++..+.++.+ +|||||||||||++|+||+.+|+++|+.||.+|+++|||| +|..|||+
T Consensus 64 viGDIHG~--~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~ 141 (315)
T 3h63_A 64 VCGDTHGQ--FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFE 141 (315)
T ss_dssp EECCCTTC--HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHH
T ss_pred EEecCCCC--HHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCccccccccccccc
Confidence 46777777 44477777776766655 5999999999999999999999999999999999999999 88999999
Q ss_pred hhcccccc
Q psy11688 536 LLYPNHFF 543 (546)
Q Consensus 536 ~e~~~~~~ 543 (546)
+|+.+++.
T Consensus 142 ~e~~~k~~ 149 (315)
T 3h63_A 142 GEVKAKYT 149 (315)
T ss_dssp HHHHHHSC
T ss_pred HHHHHHhh
Confidence 99988873
No 15
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=99.77 E-value=7.4e-20 Score=180.18 Aligned_cols=91 Identities=30% Similarity=0.505 Sum_probs=81.6
Q ss_pred hhhhhhhhhHhhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC---
Q psy11688 451 FMTDLMQTYKAQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC--- 527 (546)
Q Consensus 451 ~l~~l~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh--- 527 (546)
.+.++..++..+|||||+| +.|.++++..+.++.++|||||||||||++|+||+.+|+++|+.||.+++++||||
T Consensus 50 ~ll~~~~~i~viGDIHG~~--~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 50 ILLELEAPLKICGDIHGQY--YDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SEEEECSSEEEECBCTTCH--HHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CeeecCCCEEEEecCCCCH--HHHHHHHHHhCCCCCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhh
Confidence 3334444567899999994 66999999999999999999999999999999999999999999999999999999
Q ss_pred -cccccchhhhcccccc
Q psy11688 528 -IFTLFGFKLLYPNHFF 543 (546)
Q Consensus 528 -~~~~~gf~~e~~~~~~ 543 (546)
+|+.|||++||.++|.
T Consensus 128 ~i~~~ygF~~e~~~ky~ 144 (299)
T 3e7a_A 128 SINRIYGFYDECKRRYN 144 (299)
T ss_dssp HHHHHHSHHHHHHHHSC
T ss_pred hhcccccchHHHHHHhh
Confidence 8899999999998874
No 16
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=99.76 E-value=1.2e-19 Score=181.83 Aligned_cols=85 Identities=31% Similarity=0.544 Sum_probs=78.0
Q ss_pred hhhHhhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC----ccccc
Q psy11688 457 QTYKAQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC----IFTLF 532 (546)
Q Consensus 457 ~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh----~~~~~ 532 (546)
.++..+|||||+| +.|.++++..+.++.++|||||||||||++|+||+.+|+++|+.||.+++++|||| +++.|
T Consensus 70 ~pi~ViGDIHG~~--~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~y 147 (357)
T 3ll8_A 70 APVTVCGDIHGQF--FDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYF 147 (357)
T ss_dssp SSEEEECCCTTCH--HHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHS
T ss_pred ccceeeccCCCCH--HHHHHHHHhcCCCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhccc
Confidence 3445899999994 55888999989999999999999999999999999999999999999999999999 88999
Q ss_pred chhhhcccccc
Q psy11688 533 GFKLLYPNHFF 543 (546)
Q Consensus 533 gf~~e~~~~~~ 543 (546)
||++||.++|.
T Consensus 148 gF~~E~~~ky~ 158 (357)
T 3ll8_A 148 TFKQECKIKYS 158 (357)
T ss_dssp SHHHHHHHHSC
T ss_pred Cchhhhhhccc
Confidence 99999998873
No 17
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.74 E-value=9.4e-18 Score=149.90 Aligned_cols=121 Identities=21% Similarity=0.210 Sum_probs=111.9
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-------------AIYYANRSFAYLKTEAIGYALNDASKAIEL 97 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-------------~~a~~nla~~~~~~g~~~~Al~~~~~al~l 97 (546)
+...+..+.++|+.+++.|+|++|+..|++||+++|+ +.+|.|+|.++.++|+|++|+.+|++||++
T Consensus 7 ~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 7 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3557889999999999999999999999999999996 239999999999999999999999999999
Q ss_pred -------CCCcHHHH----HHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhh
Q psy11688 98 -------DQTYTKAY----YRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKR 151 (546)
Q Consensus 98 -------~p~~~~a~----~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~ 151 (546)
+|++.++| +++|.++..+|++++|+.+|+++++++|++..+...+..+...+..
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~ 151 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAID 151 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHH
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999999999988877777665543
No 18
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.74 E-value=1.1e-17 Score=186.49 Aligned_cols=171 Identities=16% Similarity=0.174 Sum_probs=153.2
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
..|+.++++.++|..+.++|++++|+..|++|++++|+ +.+|+++|.+|.++|++++|++.|++|++++|+++.+|+++
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nL 83 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNM 83 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 46889999999999999999999999999999999996 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccccc
Q psy11688 109 AAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDE 188 (546)
Q Consensus 109 g~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~ 188 (546)
|.+|..+|++++|+++|++|++++|++..++.+++.++...++++ +++..+++++...|+........+
T Consensus 84 g~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~-----------eAi~~~~~Al~l~P~~~~a~~~L~ 152 (723)
T 4gyw_A 84 GNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIP-----------EAIASYRTALKLKPDFPDAYCNLA 152 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-----------HHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH-----------HHHHHHHHHHHhCCCChHHHhhhh
Confidence 999999999999999999999999999999999999998887763 445556666777887776666666
Q ss_pred cccccccccchhHhhHHHHHHHh
Q psy11688 189 AKFTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 189 ~~~~viGDihg~~~~l~~il~~~ 211 (546)
..+...|+..++.+.+.++++..
T Consensus 153 ~~l~~~g~~~~A~~~~~kal~l~ 175 (723)
T 4gyw_A 153 HCLQIVCDWTDYDERMKKLVSIV 175 (723)
T ss_dssp HHHHHTTCCTTHHHHHHHHHHHH
T ss_pred hHHHhcccHHHHHHHHHHHHHhC
Confidence 67788899999888888887754
No 19
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.74 E-value=7e-18 Score=161.32 Aligned_cols=161 Identities=22% Similarity=0.314 Sum_probs=114.4
Q ss_pred ccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhh
Q psy11688 186 EDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQ 265 (546)
Q Consensus 186 ~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 265 (546)
+...++.++||+||++..+.++++..+.++..+.++++||++|||+++.+++.++.. ..+++++||||.+.++.
T Consensus 10 ~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~~~ 83 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMIDG 83 (221)
T ss_dssp GGCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHHHH
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHHhh
Confidence 344568999999999999999999987765667899999999999999999876543 36999999999988765
Q ss_pred hhcchhhh---------hhh---chHHHHHHHHHhhccccceeee---cceEEEEeCCccCCCCCChhhhhccCCCCCCC
Q psy11688 266 IYGFEGEV---------KSK---YTDLMAQFFTEVYNWLPLCHCI---NNKVLVMHGGLFSSDNVTLEDIRTIDRNRQPP 330 (546)
Q Consensus 266 ~~~~~~e~---------~~~---~~~~~~~~~~~~~~~lP~~~~~---~~~~~~vHgGi~~~~~~~~~~i~~~~r~~~~~ 330 (546)
.+++.... ... ....+.+.+.++|..||..+++ +.+++|||||+| +.... ..++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~-~~~~~------~~~~~--- 153 (221)
T 1g5b_A 84 LSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYP-FDEYE------FGKPV--- 153 (221)
T ss_dssp HSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCC-SSBCC------TTCCC---
T ss_pred hccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCC-hhhcc------cCCCc---
Confidence 43321110 000 1245667788999999999877 568999999983 32211 11111
Q ss_pred CchhhhhhhcCCCCCCCCCCCCCCCCeeeeCHHHHHHHHH-----hcCCcEEEEeccccc
Q psy11688 331 DEGLMCELLWSDPQIPNGRAPSKRGVGVHFGPDVTKAFLE-----RNKLEYIIRSHEVKQ 385 (546)
Q Consensus 331 ~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~-----~~~~~~iir~H~~~~ 385 (546)
...+++|+++.. .+..+ ..+.+.+|-||+.++
T Consensus 154 ---~~~~~lw~~~~~--------------------~~~~~~~~~~~~~~~~vv~GHth~~ 190 (221)
T 1g5b_A 154 ---DHQQVIWNRERI--------------------SNSQNGIVKEIKGADTFIFGHTPAV 190 (221)
T ss_dssp ---CHHHHHHCCHHH--------------------HHHHTTCCCCCBTSSEEEECSSCCS
T ss_pred ---cccccccCchhh--------------------hhhccccCCcccCCCEEEECCCCCc
Confidence 135789987531 12222 356788999999875
No 20
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=99.73 E-value=6.2e-19 Score=176.12 Aligned_cols=82 Identities=32% Similarity=0.538 Sum_probs=75.1
Q ss_pred hHhhCcchhhhHHHHHHHHHHhcCCCCC-cceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC----cccccc
Q psy11688 459 YKAQGKLHRKYAYRILMDIKKKKILNLD-FTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC----IFTLFG 533 (546)
Q Consensus 459 f~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh----~~~~~g 533 (546)
+..+|||||+ ++.|.++++..+.++. ++|||||||||||++|+||+.+|+++|+.||.+|+++|||| +|+.||
T Consensus 66 i~viGDIHG~--~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~yg 143 (335)
T 3icf_A 66 ISVCGDTHGQ--FYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYG 143 (335)
T ss_dssp EEEECCCTTC--HHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHS
T ss_pred EEEEecCCCC--HHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccc
Confidence 6789999999 5558999998887765 56999999999999999999999999999999999999999 889999
Q ss_pred hhhhccccc
Q psy11688 534 FKLLYPNHF 542 (546)
Q Consensus 534 f~~e~~~~~ 542 (546)
|++|+.++|
T Consensus 144 f~~e~~~k~ 152 (335)
T 3icf_A 144 FEDECKYKY 152 (335)
T ss_dssp HHHHHHHHS
T ss_pred cchHhHhhc
Confidence 999998877
No 21
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=99.72 E-value=8e-19 Score=175.76 Aligned_cols=86 Identities=30% Similarity=0.499 Sum_probs=78.2
Q ss_pred hhhhHhhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC----cccc
Q psy11688 456 MQTYKAQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC----IFTL 531 (546)
Q Consensus 456 ~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh----~~~~ 531 (546)
..++..+|||||+| +.|.++++..+.++.++|||+|||||||++|+||+.+|+++|+.||.+++++|||| ++..
T Consensus 56 ~~~i~viGDIHG~~--~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ 133 (330)
T 1fjm_A 56 EAPLKICGDIHGQY--YDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 133 (330)
T ss_dssp CSSEEEECBCTTCH--HHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHH
T ss_pred cCceEEecCCCCCH--HHHHHHHHHhCCCCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhh
Confidence 34456899999995 66999999989888899999999999999999999999999999999999999999 7889
Q ss_pred cchhhhcccccc
Q psy11688 532 FGFKLLYPNHFF 543 (546)
Q Consensus 532 ~gf~~e~~~~~~ 543 (546)
|||++|+.++|.
T Consensus 134 ~gf~~e~~~~y~ 145 (330)
T 1fjm_A 134 YGFYDECKRRYN 145 (330)
T ss_dssp HSHHHHHHHHSC
T ss_pred hhhhhhhhhhcc
Confidence 999999988763
No 22
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.72 E-value=4.5e-17 Score=145.98 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=107.4
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHH
Q psy11688 25 KEVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTK 103 (546)
Q Consensus 25 ~~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~ 103 (546)
..+...+|+.+++++.+|..+++.|+|++|+..|+++++++|+ +.+|+++|.++..+|+|++|+..|+++++++|+++.
T Consensus 26 ~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~ 105 (151)
T 3gyz_A 26 KDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYT 105 (151)
T ss_dssp GGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcH
Confidence 4556788999999999999999999999999999999999995 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhhccCCCCc
Q psy11688 104 AYYRRAAAYMSLGKFKLALRDYEAVHKARPNDK 136 (546)
Q Consensus 104 a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~ 136 (546)
+|+++|.+|..+|++++|+++|++++++.|+.+
T Consensus 106 ~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 106 PVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999999999999999999999999999999764
No 23
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=99.71 E-value=1.6e-18 Score=180.27 Aligned_cols=82 Identities=32% Similarity=0.575 Sum_probs=75.8
Q ss_pred hHhhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC----cccccch
Q psy11688 459 YKAQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC----IFTLFGF 534 (546)
Q Consensus 459 f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh----~~~~~gf 534 (546)
+..+|||||+| +.|.++++..+.++.++|||||||||||++|+||+.+|+++|+.||.++++||||| ++..|||
T Consensus 85 I~VIGDIHGq~--~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF 162 (521)
T 1aui_A 85 VTVCGDIHGQF--FDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTF 162 (521)
T ss_dssp EEEECCCTTCH--HHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSH
T ss_pred eeeccCCCCCH--HHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCc
Confidence 45899999994 55889999888888999999999999999999999999999999999999999999 7889999
Q ss_pred hhhccccc
Q psy11688 535 KLLYPNHF 542 (546)
Q Consensus 535 ~~e~~~~~ 542 (546)
++||.++|
T Consensus 163 ~~E~~~ky 170 (521)
T 1aui_A 163 KQECKIKY 170 (521)
T ss_dssp HHHHHHHS
T ss_pred cHHHHHhh
Confidence 99998776
No 24
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.71 E-value=1.5e-17 Score=158.11 Aligned_cols=168 Identities=15% Similarity=0.154 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
|.++++++.+|..+++.|++++|+..|+++++.+|+ +.+++++|.++.++|++++|+..++++++++|+++.+++.+|.
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 455678999999999999999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred HHHHh-----------cChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCc
Q psy11688 111 AYMSL-----------GKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDS 179 (546)
Q Consensus 111 ~~~~~-----------g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~ 179 (546)
++..+ |++++|+..|+++++++|++..++..++.++...++. +.+...++++.++- .
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~--------~~A~~~~~~al~~~----~ 149 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGER--------DKAEASLKQALALE----D 149 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHC----C
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCh--------HHHHHHHHHHHhcc----c
Confidence 99999 9999999999999999999999999999999888776 33444444444433 2
Q ss_pred ccccccccccccccccccchhHhhHHHHHHHh
Q psy11688 180 LVHITVEDEAKFTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 180 ~~~i~~~~~~~~~viGDihg~~~~l~~il~~~ 211 (546)
...+....+..+...|+...+...+.++++..
T Consensus 150 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 181 (217)
T 2pl2_A 150 TPEIRSALAELYLSMGRLDEALAQYAKALEQA 181 (217)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 23333334455677888888888888888864
No 25
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.71 E-value=6.6e-17 Score=139.16 Aligned_cols=116 Identities=26% Similarity=0.428 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
|..++.++++|..+++.|+|++|+..|+++++++|+ +.+|.++|.++.++|++++|+.+++++++++|+++.+|+.+|.
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 356889999999999999999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred HHHHhcChHHHHHHHHHhhccC------CCCcchhcccccchh
Q psy11688 111 AYMSLGKFKLALRDYEAVHKAR------PNDKDAKAKFTECNK 147 (546)
Q Consensus 111 ~~~~~g~~~eA~~~~~kal~l~------P~~~~~~~~l~~~~~ 147 (546)
++..+|++++|+++|+++++++ |++..++..+..+..
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQ 123 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHH
Confidence 9999999999999999999999 888877766666554
No 26
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.70 E-value=6e-17 Score=146.12 Aligned_cols=124 Identities=23% Similarity=0.309 Sum_probs=111.2
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh------------------CCC-HHHHHHHHHHHHHccCHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEV------------------NPT-AIYYANRSFAYLKTEAIGYALN 89 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~------------------~p~-~~a~~nla~~~~~~g~~~~Al~ 89 (546)
++..+.+..+.++|+.+++.|+|++|+..|++|+++ +|. ..+|+++|.+|.++|+|++|+.
T Consensus 5 ~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~ 84 (162)
T 3rkv_A 5 DDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEE 84 (162)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 345567899999999999999999999999999999 664 6899999999999999999999
Q ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCc-chhcccccchhhhhhh
Q psy11688 90 DASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDK-DAKAKFTECNKIVKRM 152 (546)
Q Consensus 90 ~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~-~~~~~l~~~~~~l~~~ 152 (546)
+++++++++|+++.+|+++|.+|..+|++++|+++|+++++++|+++ .+...+..+...++..
T Consensus 85 ~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 85 TSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEK 148 (162)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 6676677666655544
No 27
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.70 E-value=6.2e-17 Score=144.69 Aligned_cols=120 Identities=13% Similarity=0.026 Sum_probs=111.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHH
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYY 106 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~ 106 (546)
...+|+.+..++.+|.+|++.|+|++|+..|+++++++|+ +.+|+++|.+|..+|++++|+..|+++++++|+++.+|+
T Consensus 24 ~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 103 (150)
T 4ga2_A 24 TPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVL 103 (150)
T ss_dssp SCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHH
Confidence 3567888999999999999999999999999999999995 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcChHHHHHH-HHHhhccCCCCcchhcccccchh
Q psy11688 107 RRAAAYMSLGKFKLALRD-YEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 107 ~lg~~~~~~g~~~eA~~~-~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
++|.+|..+|++++|.+. +++|++++|+++.++...+.+..
T Consensus 104 ~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 104 KIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp HHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 999999999999988776 59999999999998876666554
No 28
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.70 E-value=9.3e-17 Score=139.35 Aligned_cols=106 Identities=22% Similarity=0.332 Sum_probs=99.3
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc------
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY------ 101 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~------ 101 (546)
+..++.+.++.++|+.++++|+|++|+..|++|++++|+ +.+|.++|.+|.++|+|++|+++++++++++|++
T Consensus 2 n~~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 81 (127)
T 4gcn_A 2 NAMTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKL 81 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHH
Confidence 345778899999999999999999999999999999995 9999999999999999999999999999999876
Q ss_pred -HHHHHHHHHHHHHhcChHHHHHHHHHhhccCCC
Q psy11688 102 -TKAYYRRAAAYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 102 -~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
..+|+++|.++..+|++++|+++|+++++.+|+
T Consensus 82 ~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 82 IAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 358999999999999999999999999999885
No 29
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=99.69 E-value=6.6e-18 Score=168.09 Aligned_cols=87 Identities=26% Similarity=0.390 Sum_probs=78.2
Q ss_pred hhhhhHhhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC----ccc
Q psy11688 455 LMQTYKAQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC----IFT 530 (546)
Q Consensus 455 l~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh----~~~ 530 (546)
+..++..+|||||+| +.|.++++..+.++.+.|||+|||||||++|.||+.+|+++|+.||.+++++|||| ++.
T Consensus 48 ~~~~i~viGDIHG~~--~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~ 125 (309)
T 2ie4_C 48 VRCPVTVCGDVHGQF--HDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQ 125 (309)
T ss_dssp ECSSEEEECCCTTCH--HHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGG
T ss_pred ccCCEEEEecCCCCH--HHHHHHHHHcCCCCCCEEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhh
Confidence 334456899999995 56899999888888899999999999999999999999999999999999999999 788
Q ss_pred ccchhhhcccccc
Q psy11688 531 LFGFKLLYPNHFF 543 (546)
Q Consensus 531 ~~gf~~e~~~~~~ 543 (546)
.|||++|+.++|.
T Consensus 126 ~~gf~~e~~~~yg 138 (309)
T 2ie4_C 126 VYGFYDECLRKYG 138 (309)
T ss_dssp TSSHHHHHHHHSS
T ss_pred hhhhhHHHHhhcc
Confidence 9999999988764
No 30
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.68 E-value=3.2e-16 Score=138.36 Aligned_cols=125 Identities=13% Similarity=0.135 Sum_probs=114.5
Q ss_pred CCChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHH
Q psy11688 26 EVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKA 104 (546)
Q Consensus 26 ~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a 104 (546)
++...+|+.+..++.+|..+++.|+|++|+..|+++++.+|+ +.+|+++|.++..+|++++|+..|+++++++|+++.+
T Consensus 9 ~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 88 (142)
T 2xcb_A 9 MLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRF 88 (142)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHH
Confidence 455678999999999999999999999999999999999995 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhh
Q psy11688 105 YYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVK 150 (546)
Q Consensus 105 ~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~ 150 (546)
++.+|.+|..+|++++|+++|+++++++|+++........+...++
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 134 (142)
T 2xcb_A 89 PFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLE 134 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999998877655555544443
No 31
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.68 E-value=3.2e-16 Score=139.79 Aligned_cols=122 Identities=11% Similarity=0.105 Sum_probs=111.7
Q ss_pred CCChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHH
Q psy11688 26 EVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKA 104 (546)
Q Consensus 26 ~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a 104 (546)
.+...+|+.+..++.+|..+++.|+|++|+..|+++++.+|+ +.+|+++|.++..+|++++|++.|+++++++|+++.+
T Consensus 12 ~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 91 (148)
T 2vgx_A 12 MLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRF 91 (148)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHH
T ss_pred HHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchH
Confidence 345678999999999999999999999999999999999995 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchh
Q psy11688 105 YYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 105 ~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
++++|.+|..+|++++|+++|+++++++|+++........+..
T Consensus 92 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 134 (148)
T 2vgx_A 92 PFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSS 134 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHH
Confidence 9999999999999999999999999999998876544444433
No 32
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.68 E-value=1.4e-16 Score=164.85 Aligned_cols=204 Identities=11% Similarity=0.030 Sum_probs=160.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCCcHHH
Q psy11688 27 VSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEA-IGYALNDASKAIELDQTYTKA 104 (546)
Q Consensus 27 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~-~~~Al~~~~~al~l~p~~~~a 104 (546)
+..-+|+.++++..+|..+.+.|++++|+..|++|++++|+ ..+|+++|.++..+|+ +++|+++++++++++|+++.+
T Consensus 89 ai~~~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a 168 (382)
T 2h6f_A 89 QIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQV 168 (382)
T ss_dssp EECCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hhhCChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHH
Confidence 34678999999999999999999999999999999999995 9999999999999997 999999999999999999999
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccc
Q psy11688 105 YYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHIT 184 (546)
Q Consensus 105 ~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~ 184 (546)
|+++|.++..+|++++|+.+|+++++++|++..++..++.++..+++++ ..+..+.+++...|......
T Consensus 169 ~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~-----------eAl~~~~~al~l~P~~~~a~ 237 (382)
T 2h6f_A 169 WHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWD-----------NELQYVDQLLKEDVRNNSVW 237 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCT-----------THHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChH-----------HHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999999999999999999998887763 34455666666677655544
Q ss_pred ccccccccc-ccccchh-----HhhHHHHHHHhCCCCCCCCeeeeccccc-cCC-ChHHHHHHHhhh
Q psy11688 185 VEDEAKFTV-CGDIHGQ-----FYDLMNIFELNGLPSPDNPYLFNGDFVD-RGS-FSVECIFTLFGF 243 (546)
Q Consensus 185 ~~~~~~~~v-iGDihg~-----~~~l~~il~~~~~~~~~~~~~~lGD~vd-rG~-~~~e~l~~l~~l 243 (546)
...+..+.. .|....+ +..+.++++..+ .....+..+|.+.. .|. +-.+++..+..+
T Consensus 238 ~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P--~~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~ 302 (382)
T 2h6f_A 238 NQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVP--HNESAWNYLKGILQDRGLSKYPNLLNQLLDL 302 (382)
T ss_dssp HHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHST--TCHHHHHHHHHHHTTTCGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHccCccchHHHHHHHHHh
Confidence 433333333 2332444 356677777643 22334555565443 342 345666666665
No 33
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.67 E-value=5.9e-16 Score=142.08 Aligned_cols=167 Identities=13% Similarity=0.114 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAA 111 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~ 111 (546)
+.+..++++|.++.++|+|++|+..|++|++++|+ ..++.++|.+|.++|++++|+..+++++..+|+++.++..+|.+
T Consensus 3 e~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSA 82 (184)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 34678999999999999999999999999999995 99999999999999999999999999999999999999999999
Q ss_pred HHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCccccccccccccc
Q psy11688 112 YMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKF 191 (546)
Q Consensus 112 ~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~ 191 (546)
+...+++++|.+.++++++++|++..++..++.++...++++ +++....+++...|....+....+..+
T Consensus 83 ~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~-----------~A~~~~~~~l~~~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHD-----------KAIEAYEKTISIKPGFIRAYQSIGLAY 151 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-----------HHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCch-----------hHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence 999999999999999999999999999999999998777663 444555566666777666555556667
Q ss_pred ccccccchhHhhHHHHHHH
Q psy11688 192 TVCGDIHGQFYDLMNIFEL 210 (546)
Q Consensus 192 ~viGDihg~~~~l~~il~~ 210 (546)
...|+...+...+.++++.
T Consensus 152 ~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 152 EGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHT
T ss_pred HHCCCHHHHHHHHHHHHhC
Confidence 7778888888888888875
No 34
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.67 E-value=6.5e-16 Score=139.60 Aligned_cols=113 Identities=32% Similarity=0.463 Sum_probs=107.5
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR 107 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~ 107 (546)
.+++..++.++.+|..+++.|+|++|+..|+++++++|+ ..+|+++|.+|..+|++++|+.+++++++++|+++.+|++
T Consensus 5 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 5 MAPTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred chhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 456778999999999999999999999999999999995 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcChHHHHHHHHHhhccCCCCcchhcc
Q psy11688 108 RAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAK 141 (546)
Q Consensus 108 lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~ 141 (546)
+|.+|..+|++++|+++|+++++++|++..++..
T Consensus 85 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 118 (164)
T 3sz7_A 85 LGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMK 118 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHH
Confidence 9999999999999999999999999999886543
No 35
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.66 E-value=2.7e-16 Score=149.45 Aligned_cols=161 Identities=17% Similarity=0.141 Sum_probs=131.6
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKT-----------EAIGYALNDASKAIE 96 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~-----------g~~~~Al~~~~~al~ 96 (546)
..+|+.+.+++.+|.++.+.|++++|+..|+++++++|+ ..+++++|.++..+ |++++|+..++++++
T Consensus 33 ~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 112 (217)
T 2pl2_A 33 KENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAER 112 (217)
T ss_dssp TTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHH
Confidence 456778899999999999999999999999999999995 89999999999999 999999999999999
Q ss_pred hCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhc
Q psy11688 97 LDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMT 176 (546)
Q Consensus 97 l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~ 176 (546)
++|+++.+++.+|.++..+|++++|++.|+++++++ +++.++..++.++...++.+ +.+..+.+++..
T Consensus 113 ~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~-----------~A~~~~~~al~~ 180 (217)
T 2pl2_A 113 VNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLD-----------EALAQYAKALEQ 180 (217)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHH-----------HHHHHHHHHHHH
T ss_pred hCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHH-----------HHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 99999999999998877763 344455556666
Q ss_pred CCcccccccccccccccccccchhH
Q psy11688 177 QDSLVHITVEDEAKFTVCGDIHGQF 201 (546)
Q Consensus 177 ~p~~~~i~~~~~~~~~viGDihg~~ 201 (546)
.|....+....+..+...|+...+.
T Consensus 181 ~P~~~~~~~~la~~~~~~g~~~~A~ 205 (217)
T 2pl2_A 181 APKDLDLRVRYASALLLKGKAEEAA 205 (217)
T ss_dssp STTCHHHHHHHHHHHTC--------
T ss_pred CCCChHHHHHHHHHHHHccCHHHHH
Confidence 6765544333222233344443333
No 36
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.65 E-value=1.2e-16 Score=165.51 Aligned_cols=152 Identities=9% Similarity=-0.054 Sum_probs=130.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHH
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQA-YNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAY 105 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~-~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~ 105 (546)
...+|+.+.+|..+|.++...|+ +++|+..|++|++++|+ ..+|+++|.++..+|++++|+.+|++|++++|++..+|
T Consensus 124 l~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~ 203 (382)
T 2h6f_A 124 IELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAW 203 (382)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHH
Confidence 35688889999999999999997 99999999999999995 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccc
Q psy11688 106 YRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHIT 184 (546)
Q Consensus 106 ~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~ 184 (546)
+++|.++..+|++++|+++|+++++++|++..++..++.++..+... .........+..+.+++...|+.....
T Consensus 204 ~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~-----~~eA~~~~el~~~~~Al~l~P~~~~a~ 277 (382)
T 2h6f_A 204 QHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGY-----NDRAVLEREVQYTLEMIKLVPHNESAW 277 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCS-----CSHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc-----chHHHHHHHHHHHHHHHHHCCCCHHHH
Confidence 99999999999999999999999999999999999999988763322 111112223455666677777755443
No 37
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.62 E-value=4.7e-15 Score=139.81 Aligned_cols=117 Identities=15% Similarity=0.143 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHH----------------HHHHHHHccCHHHHHHHHHHHHH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYAN----------------RSFAYLKTEAIGYALNDASKAIE 96 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~n----------------la~~~~~~g~~~~Al~~~~~al~ 96 (546)
.++.+..+|..++..|+|++|+..|+++++.+|+ +.+++. +|.++..+|++++|+..|+++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3677899999999999999999999999999995 788988 99999999999999999999999
Q ss_pred hCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhh
Q psy11688 97 LDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVK 150 (546)
Q Consensus 97 l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~ 150 (546)
++|+++.+++.+|.++..+|++++|+++|+++++++|++..++..++.++...+
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998876544
No 38
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.62 E-value=5e-15 Score=150.60 Aligned_cols=128 Identities=27% Similarity=0.382 Sum_probs=121.7
Q ss_pred CChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHccCHHHHHHH
Q psy11688 27 VSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT----------------AIYYANRSFAYLKTEAIGYALND 90 (546)
Q Consensus 27 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~----------------~~a~~nla~~~~~~g~~~~Al~~ 90 (546)
..+.+|+.+.++.++|..+++.|+|++|+..|++|++++|+ ..+|.++|.+|.++|++++|+.+
T Consensus 139 a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~ 218 (336)
T 1p5q_A 139 NSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIES 218 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 34678999999999999999999999999999999999995 48999999999999999999999
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhh
Q psy11688 91 ASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQI 154 (546)
Q Consensus 91 ~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~ 154 (546)
|++|++++|+++.+|+++|.+|..+|++++|+++|+++++++|++..++..++.++..+++.+.
T Consensus 219 ~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~ 282 (336)
T 1p5q_A 219 CNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLA 282 (336)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988887754
No 39
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.61 E-value=6.1e-15 Score=140.25 Aligned_cols=134 Identities=17% Similarity=0.141 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNP--TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAY 112 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p--~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 112 (546)
++.++.+|..++..|+|++|+..|+++++++| +..+++++|.++..+|++++|+..++++++++|+++.+|+.+|.+|
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 37899999999999999999999999999996 5889999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHHhhccCCCCcch-------hcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCc
Q psy11688 113 MSLGKFKLALRDYEAVHKARPNDKDA-------KAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDS 179 (546)
Q Consensus 113 ~~~g~~~eA~~~~~kal~l~P~~~~~-------~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~ 179 (546)
..+|++++|++.|+++++++|+++.. +..++.++...+++ .+++....+++...|.
T Consensus 87 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNI-----------EKAEENYKHATDVTSK 149 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHTTSSCH
T ss_pred HHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccH-----------HHHHHHHHHHHhcCCC
Confidence 99999999999999999999999944 55555555544444 2444445555555555
No 40
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.60 E-value=7.6e-15 Score=136.82 Aligned_cols=130 Identities=25% Similarity=0.327 Sum_probs=119.9
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-H----------------HHHHHHHHHHHHccCHHH
Q psy11688 24 PKEVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-A----------------IYYANRSFAYLKTEAIGY 86 (546)
Q Consensus 24 ~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~----------------~a~~nla~~~~~~g~~~~ 86 (546)
.....++.++.+..+..+|..++..|+|++|+..|++++++.|+ . .++.++|.++..+|++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 106 (198)
T 2fbn_A 27 YDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPK 106 (198)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 33445778889999999999999999999999999999999884 4 899999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhh
Q psy11688 87 ALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 87 Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~ 153 (546)
|+.+++++++++|+++.+++++|.+|..+|++++|++.|+++++++|++..++..++.+...+++..
T Consensus 107 A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~ 173 (198)
T 2fbn_A 107 AIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEAR 173 (198)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998888887766554
No 41
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.60 E-value=1.5e-14 Score=123.37 Aligned_cols=125 Identities=34% Similarity=0.511 Sum_probs=115.6
Q ss_pred CChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHH
Q psy11688 27 VSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAY 105 (546)
Q Consensus 27 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~ 105 (546)
....++..+..+..+|..++..|++++|+..|+++++.+|+ ..++.++|.++...|++++|+..++++++++|+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 83 (131)
T 2vyi_A 4 GSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAY 83 (131)
T ss_dssp ---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHH
Confidence 34578889999999999999999999999999999999995 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhh
Q psy11688 106 YRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKR 151 (546)
Q Consensus 106 ~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~ 151 (546)
+.+|.++..+|++++|++.|+++++++|++..++..++.++...++
T Consensus 84 ~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 84 GRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999988888877766554
No 42
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.60 E-value=3.6e-15 Score=143.49 Aligned_cols=208 Identities=10% Similarity=0.008 Sum_probs=154.0
Q ss_pred ChhhHHH-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHH
Q psy11688 28 SVEDKER-AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAY 105 (546)
Q Consensus 28 ~~~~~~~-a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~ 105 (546)
...+|+. +..+..+|..++..|++++|+..|+++++.+|+ ..++..+|.++...|++++|++.++++++++|++..++
T Consensus 29 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 108 (252)
T 2ho1_A 29 TDKGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVL 108 (252)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHH
Confidence 4556665 899999999999999999999999999999995 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcChHHHHHHHHHhhc--cCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCccccc
Q psy11688 106 YRRAAAYMSLGKFKLALRDYEAVHK--ARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHI 183 (546)
Q Consensus 106 ~~lg~~~~~~g~~~eA~~~~~kal~--l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i 183 (546)
..+|.++...|++++|++.|+++++ ..|.+..++..++.++...++.+ .+... ..+++...|.....
T Consensus 109 ~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~--------~A~~~---~~~~~~~~~~~~~~ 177 (252)
T 2ho1_A 109 NNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPA--------QAKEY---FEKSLRLNRNQPSV 177 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHH--------HHHHH---HHHHHHHCSCCHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHH--------HHHHH---HHHHHhcCcccHHH
Confidence 9999999999999999999999999 88888888888888887766652 23333 33344444543333
Q ss_pred ccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCC
Q psy11688 184 TVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYP 248 (546)
Q Consensus 184 ~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p 248 (546)
....+..+...|+...+...+.++++.. |.....+..++.+..+-.+..++..++..+....|
T Consensus 178 ~~~la~~~~~~g~~~~A~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p 240 (252)
T 2ho1_A 178 ALEMADLLYKEREYVPARQYYDLFAQGG--GQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYP 240 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTS--CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC--cCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC
Confidence 3333334555666666666666666532 22222234444444444445555555555544444
No 43
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.60 E-value=5.2e-15 Score=127.07 Aligned_cols=120 Identities=29% Similarity=0.462 Sum_probs=112.3
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR 107 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~ 107 (546)
...+..+.+++.+|..++..|++++|+..|+++++.+|+ ..++.++|.++..+|++++|+..++++++++|+++.+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 89 (133)
T 2lni_A 10 HMNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTR 89 (133)
T ss_dssp CSSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHH
Confidence 455667899999999999999999999999999999994 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhh
Q psy11688 108 RAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKI 148 (546)
Q Consensus 108 lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~ 148 (546)
+|.++..+|++++|++.|+++++++|++..++..++.++..
T Consensus 90 la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 90 KAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999998888777776654
No 44
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.59 E-value=4e-16 Score=139.38 Aligned_cols=112 Identities=13% Similarity=0.001 Sum_probs=103.6
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChH
Q psy11688 41 EANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFK 119 (546)
Q Consensus 41 ~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~ 119 (546)
+|..+..+|++++|+..+.+++..+|+ +.+++++|.+|+++|+|++|++.++++++++|+++.+|+.+|.+|..+|+++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~ 82 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTD 82 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchH
Confidence 688888999999999999999999985 8889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCcchhcccccchhhhhhh
Q psy11688 120 LALRDYEAVHKARPNDKDAKAKFTECNKIVKRM 152 (546)
Q Consensus 120 eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~ 152 (546)
+|+.+|+++++++|+++.++..++.++...++.
T Consensus 83 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 115 (150)
T 4ga2_A 83 KAVECYRRSVELNPTQKDLVLKIAELLCKNDVT 115 (150)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCh
Confidence 999999999999999999999999998777665
No 45
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.59 E-value=3.2e-15 Score=166.60 Aligned_cols=127 Identities=22% Similarity=0.223 Sum_probs=120.9
Q ss_pred ChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHH
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYY 106 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~ 106 (546)
.+.+|+.+.++.++|.++.++|++++|+..|++|++++|+ +.+|+++|.++.++|++++|++.|++|++++|+++.+|+
T Consensus 36 l~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~ 115 (723)
T 4gyw_A 36 LEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHS 115 (723)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 3556778899999999999999999999999999999996 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhh
Q psy11688 107 RRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQI 154 (546)
Q Consensus 107 ~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~ 154 (546)
++|.+|..+|++++|+++|++|++++|++..++.+++.++..+++.+.
T Consensus 116 ~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~ 163 (723)
T 4gyw_A 116 NLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTD 163 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHH
Confidence 999999999999999999999999999999999999999988887753
No 46
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=9.3e-15 Score=128.10 Aligned_cols=121 Identities=31% Similarity=0.407 Sum_probs=111.3
Q ss_pred CCChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc
Q psy11688 26 EVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT----AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY 101 (546)
Q Consensus 26 ~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~ 101 (546)
.....++..+..++..|..++..|+|++|+..|+++++.+|+ ..++.++|.++..+|++++|+..++++++++|++
T Consensus 19 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 98 (148)
T 2dba_A 19 RPATPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD 98 (148)
T ss_dssp CCCCTTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC
T ss_pred cCCccchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC
Confidence 334456667889999999999999999999999999999996 7899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccch
Q psy11688 102 TKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECN 146 (546)
Q Consensus 102 ~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~ 146 (546)
+.+++.+|.++..+|++++|+++|+++++++|++..++..++.+.
T Consensus 99 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 99 VKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999988876665543
No 47
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.59 E-value=1.2e-14 Score=124.88 Aligned_cols=101 Identities=16% Similarity=0.081 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Q psy11688 37 KLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSL 115 (546)
Q Consensus 37 ~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~ 115 (546)
.++.+|..+++.|++++|+..|+++++.+|+ +.+|+++|.++..+|++++|+..++++++++|+++.+++.+|.++..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 4688999999999999999999999999995 999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHhhccCCCCcc
Q psy11688 116 GKFKLALRDYEAVHKARPNDKD 137 (546)
Q Consensus 116 g~~~eA~~~~~kal~l~P~~~~ 137 (546)
|++++|+..|+++++++|++..
T Consensus 99 g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999998654
No 48
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.59 E-value=9.1e-15 Score=155.12 Aligned_cols=127 Identities=27% Similarity=0.385 Sum_probs=116.6
Q ss_pred CChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHccCHHHHHHH
Q psy11688 27 VSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT----------------AIYYANRSFAYLKTEAIGYALND 90 (546)
Q Consensus 27 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~----------------~~a~~nla~~~~~~g~~~~Al~~ 90 (546)
..+.+|+.+.+++++|+.++++|+|++|+..|++|++++|+ ..+|+++|.||.++|+|++|+.+
T Consensus 260 ~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~ 339 (457)
T 1kt0_A 260 DTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVEC 339 (457)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 34678899999999999999999999999999999999994 58999999999999999999999
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhh
Q psy11688 91 ASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 91 ~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~ 153 (546)
|++|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.++..+++.+
T Consensus 340 ~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~ 402 (457)
T 1kt0_A 340 CDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHN 402 (457)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998877664
No 49
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.57 E-value=1.1e-14 Score=136.79 Aligned_cols=208 Identities=11% Similarity=0.047 Sum_probs=157.9
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.+|+.+..+..+|..++..|++++|+..|+++++.+|+ ..++..+|.++...|++++|+..++++++++|++..++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l 82 (225)
T 2vq2_A 3 KANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNY 82 (225)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHH
Confidence 46778899999999999999999999999999999995 89999999999999999999999999999999999999999
Q ss_pred HHHHHHh-cChHHHHHHHHHhhc--cCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCccccccc
Q psy11688 109 AAAYMSL-GKFKLALRDYEAVHK--ARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITV 185 (546)
Q Consensus 109 g~~~~~~-g~~~eA~~~~~kal~--l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~ 185 (546)
|.++... |++++|+..|+++++ .+|.+..++..++.++...++.+ .+.. ...+.+...|.......
T Consensus 83 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~A~~---~~~~~~~~~~~~~~~~~ 151 (225)
T 2vq2_A 83 GWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFG--------LAEA---YLKRSLAAQPQFPPAFK 151 (225)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHH--------HHHH---HHHHHHHHSTTCHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHH--------HHHH---HHHHHHHhCCCCchHHH
Confidence 9999999 999999999999999 66666788888888887766653 2333 33344444555433333
Q ss_pred ccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCC
Q psy11688 186 EDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249 (546)
Q Consensus 186 ~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~ 249 (546)
..+..+...|+...+...+.++++..+. .....+..++.+.....+..++..+...+....|+
T Consensus 152 ~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~p~ 214 (225)
T 2vq2_A 152 ELARTKMLAGQLGDADYYFKKYQSRVEV-LQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPY 214 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCS-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCC
Confidence 3344456677888888888888876540 12222333444444555556666666665545544
No 50
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.57 E-value=8.4e-15 Score=127.18 Aligned_cols=104 Identities=29% Similarity=0.454 Sum_probs=99.4
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRA 109 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg 109 (546)
++..+..++..|..++..|+|++|+..|+++++.+|+ ..+++++|.++..+|++++|+..++++++++|+++.+++.+|
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 3445788999999999999999999999999999995 899999999999999999999999999999999999999999
Q ss_pred HHHHHhcChHHHHHHHHHhhccCCC
Q psy11688 110 AAYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 110 ~~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
.++..+|++++|+..|+++++++|+
T Consensus 85 ~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 85 QCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHChh
Confidence 9999999999999999999999997
No 51
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.56 E-value=1.7e-14 Score=150.87 Aligned_cols=224 Identities=15% Similarity=0.143 Sum_probs=167.1
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcH
Q psy11688 24 PKEVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYT 102 (546)
Q Consensus 24 ~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~ 102 (546)
-.++...+|..+..+..+|..+++.|++++|+..|+++++.+|+ ..+++++|.++..+|++++|+..++++++++|++.
T Consensus 15 ~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 94 (450)
T 2y4t_A 15 TENLYFQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFT 94 (450)
T ss_dssp --------CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred ccccccccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 34556788999999999999999999999999999999999995 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCc---chhcccccchhhhhhhhhhh-hchHHHHHHHHHHHHhhhhcCC
Q psy11688 103 KAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDK---DAKAKFTECNKIVKRMQIKG-KLHRKYAYRILMDIKALFMTQD 178 (546)
Q Consensus 103 ~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~---~~~~~l~~~~~~l~~~~~~~-~l~~~~~~~il~~a~eiL~~~p 178 (546)
.++..+|.+|..+|++++|++.|+++++++|++. .++..+..++........+. ....+....++....+++...|
T Consensus 95 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 174 (450)
T 2y4t_A 95 AARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCV 174 (450)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999988 77776655543333322211 1222333444555555566666
Q ss_pred cccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCC
Q psy11688 179 SLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249 (546)
Q Consensus 179 ~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~ 249 (546)
....+....+..+...|+...+...+.++++..+. ....+..+|...-+-.+..+++..+.......|+
T Consensus 175 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~--~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~ 243 (450)
T 2y4t_A 175 WDAELRELRAECFIKEGEPRKAISDLKAASKLKND--NTEAFYKISTLYYQLGDHELSLSEVRECLKLDQD 243 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCS--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 65554444455667788888899999988887532 2334566776665555666677666655555554
No 52
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.55 E-value=3.5e-14 Score=130.07 Aligned_cols=141 Identities=20% Similarity=0.195 Sum_probs=127.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHH
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYY 106 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~ 106 (546)
.+.+|+.+.++..+|.++.+.|++++|+..+.+++..+|+ ..++.++|.++...+++++|+..+.++++++|++..++.
T Consensus 32 l~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~ 111 (184)
T 3vtx_A 32 LKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYY 111 (184)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHH
Confidence 3567788899999999999999999999999999999996 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCc
Q psy11688 107 RRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDS 179 (546)
Q Consensus 107 ~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~ 179 (546)
.+|.+|..+|++++|++.|+++++++|+++.++..++.++...++.+ +++....+++..+|+
T Consensus 112 ~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~-----------~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 112 KLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRD-----------EAVKYFKKALEKEEK 173 (184)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-----------HHHHHHHHHHHTTHH
T ss_pred HHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHH-----------HHHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999998887763 334444455555554
No 53
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.55 E-value=1.4e-13 Score=123.10 Aligned_cols=117 Identities=62% Similarity=1.001 Sum_probs=110.1
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR 107 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~ 107 (546)
....+.+..+..+|..++..|++++|+..|+++++.+|+ ..++.++|.++..+|++++|+..++++++++|+++.+++.
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 86 (166)
T 1a17_A 7 DGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYR 86 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 456678999999999999999999999999999999995 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccc
Q psy11688 108 RAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTEC 145 (546)
Q Consensus 108 lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~ 145 (546)
+|.++..+|++++|++.|+++++++|++..++..++.+
T Consensus 87 ~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 87 RAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 99999999999999999999999999998887655555
No 54
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.55 E-value=7.8e-14 Score=116.64 Aligned_cols=113 Identities=31% Similarity=0.474 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAY 112 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 112 (546)
.++.++..|..++..|++++|+..|+++++.+|+ ..++.++|.++..+|++++|+..++++++++|+++.+++.+|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 4678999999999999999999999999999994 899999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHHhhccCCCCcchhcccccch
Q psy11688 113 MSLGKFKLALRDYEAVHKARPNDKDAKAKFTECN 146 (546)
Q Consensus 113 ~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~ 146 (546)
..+|++++|++.|+++++++|++..++..++.+.
T Consensus 83 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 9999999999999999999999988877665543
No 55
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.54 E-value=6.6e-15 Score=140.32 Aligned_cols=167 Identities=20% Similarity=0.152 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAA 111 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~ 111 (546)
-.+..++.+|..++..|++++|+..|+++++.+|+ ..++..+|.++...|++++|+..++++++++|++..++..+|.+
T Consensus 21 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 100 (243)
T 2q7f_A 21 MASMTGGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNV 100 (243)
T ss_dssp ---------------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 34667788888888888888888888888888884 78888888888888888888888888888888888888888888
Q ss_pred HHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCccccccccccccc
Q psy11688 112 YMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKF 191 (546)
Q Consensus 112 ~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~ 191 (546)
+..+|++++|++.|+++++.+|++..++..++.++...++. +.+...++ +++...|....+....+..+
T Consensus 101 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~A~~~~~---~~~~~~~~~~~~~~~l~~~~ 169 (243)
T 2q7f_A 101 YVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQP--------KLALPYLQ---RAVELNENDTEARFQFGMCL 169 (243)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCH--------HHHHHHHH---HHHHHCTTCHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccH--------HHHHHHHH---HHHHhCCccHHHHHHHHHHH
Confidence 88888888888888888888888888887777777666555 22333333 33333443333322233345
Q ss_pred ccccccchhHhhHHHHHHH
Q psy11688 192 TVCGDIHGQFYDLMNIFEL 210 (546)
Q Consensus 192 ~viGDihg~~~~l~~il~~ 210 (546)
...|+...+...+.++++.
T Consensus 170 ~~~~~~~~A~~~~~~~~~~ 188 (243)
T 2q7f_A 170 ANEGMLDEALSQFAAVTEQ 188 (243)
T ss_dssp HHHTCCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHh
Confidence 5566666667677776665
No 56
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.54 E-value=1.4e-14 Score=148.99 Aligned_cols=217 Identities=13% Similarity=0.120 Sum_probs=125.0
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.+|+.+..+..+|..+++.|++++|+..++++++.+|+ +.+|.++|.++.+.|++++|++.|+++++++|++..+|..+
T Consensus 28 ~~p~~~~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 107 (388)
T 1w3b_A 28 QEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINL 107 (388)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHH
Confidence 34555566666777777777777777777777777773 66777777777777777777777777777777777777777
Q ss_pred HHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhc-----------------------hHHHHHH
Q psy11688 109 AAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKL-----------------------HRKYAYR 165 (546)
Q Consensus 109 g~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l-----------------------~~~~~~~ 165 (546)
|.++...|++++|++.|+++++++|++..++..++.++...++.+..... ..+....
T Consensus 108 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 187 (388)
T 1w3b_A 108 AAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWL 187 (388)
T ss_dssp HHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 77777777777777777777777777776666666666555544321000 0011122
Q ss_pred HHHHHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhh
Q psy11688 166 ILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKL 245 (546)
Q Consensus 166 il~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~ 245 (546)
++....+++...|.........+..+...|+...+...+.++++..+ .....+..+|...-+-.+..+++..+.....
T Consensus 188 A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 265 (388)
T 1w3b_A 188 AIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP--NHAVVHGNLACVYYEQGLIDLAIDTYRRAIE 265 (388)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCc--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 33334444445555444433333444455566666666666665432 1112233445444344444455554444433
Q ss_pred cCC
Q psy11688 246 LYP 248 (546)
Q Consensus 246 ~~p 248 (546)
..|
T Consensus 266 ~~p 268 (388)
T 1w3b_A 266 LQP 268 (388)
T ss_dssp TCS
T ss_pred hCC
Confidence 333
No 57
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.53 E-value=2.6e-14 Score=147.06 Aligned_cols=217 Identities=12% Similarity=0.060 Sum_probs=118.3
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRA 109 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg 109 (546)
+|+.+.++..+|..+.+.|++++|+..|+++++.+|+ ..++.++|.++..+|++++|++.++++++.+|+++.+|..+|
T Consensus 97 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 176 (388)
T 1w3b_A 97 KPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLG 176 (388)
T ss_dssp CTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 3444555566666666666666666666666666664 555556666666666666666666666666666666666666
Q ss_pred HHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhh-----------------------hchHHHHHHH
Q psy11688 110 AAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKG-----------------------KLHRKYAYRI 166 (546)
Q Consensus 110 ~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~-----------------------~l~~~~~~~i 166 (546)
.++...|++++|++.|+++++++|++..++..++.++...++.+... ....+....+
T Consensus 177 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 256 (388)
T 1w3b_A 177 CVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLA 256 (388)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHH
Confidence 66666666666666666666666665555555555544443332200 0000112233
Q ss_pred HHHHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhc
Q psy11688 167 LMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLL 246 (546)
Q Consensus 167 l~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~ 246 (546)
+....+++...|.........+..+...|+...+...+.++++.. |.....+..+|....+-.+..+++..+......
T Consensus 257 ~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 334 (388)
T 1w3b_A 257 IDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC--PTHADSLNNLANIKREQGNIEEAVRLYRKALEV 334 (388)
T ss_dssp HHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 444445555556544443333444555677777777777777663 222334555666555555566666666555444
Q ss_pred CCC
Q psy11688 247 YPN 249 (546)
Q Consensus 247 ~p~ 249 (546)
.|+
T Consensus 335 ~p~ 337 (388)
T 1w3b_A 335 FPE 337 (388)
T ss_dssp CTT
T ss_pred CCC
Confidence 443
No 58
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.53 E-value=2.2e-14 Score=146.00 Aligned_cols=124 Identities=21% Similarity=0.275 Sum_probs=99.9
Q ss_pred CCChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH------------------HHHHHHHHHHHHccCHHHH
Q psy11688 26 EVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTA------------------IYYANRSFAYLKTEAIGYA 87 (546)
Q Consensus 26 ~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~------------------~a~~nla~~~~~~g~~~~A 87 (546)
...++.++.+..++.+|+.+++.|+|++|+..|++|+++.|+. .+|.++|.+|.++|+|++|
T Consensus 170 ~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A 249 (338)
T 2if4_A 170 MTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEA 249 (338)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 3447788999999999999999999999999999999999963 3899999999999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhh
Q psy11688 88 LNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIV 149 (546)
Q Consensus 88 l~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l 149 (546)
+.+|+++++++|++..+|+++|.+|..+|++++|+++|+++++++|++..++..++.+....
T Consensus 250 ~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 250 IGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQE 311 (338)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888875543
No 59
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.52 E-value=9.7e-14 Score=131.88 Aligned_cols=119 Identities=14% Similarity=0.096 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcH-------HHH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYT-------KAY 105 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~-------~a~ 105 (546)
....++.+|.+++..|++++|+..|+++++.+|+ ..++.++|.+|..+|++++|++.++++++++|+++ .+|
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 120 (228)
T 4i17_A 41 DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYY 120 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 3467788999999999999999999999999996 89999999999999999999999999999999999 679
Q ss_pred HHHHHHHHHhcChHHHHHHHHHhhccCCC--Ccchhcccccchhhhhhh
Q psy11688 106 YRRAAAYMSLGKFKLALRDYEAVHKARPN--DKDAKAKFTECNKIVKRM 152 (546)
Q Consensus 106 ~~lg~~~~~~g~~~eA~~~~~kal~l~P~--~~~~~~~l~~~~~~l~~~ 152 (546)
+.+|.++..+|++++|++.|+++++++|+ +..++..++.++...++.
T Consensus 121 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 121 LKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999988766554
No 60
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.52 E-value=4.4e-14 Score=145.58 Aligned_cols=125 Identities=27% Similarity=0.377 Sum_probs=116.2
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH----------------hCCC-HHHHHHHHHHHHHccCHHHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIE----------------VNPT-AIYYANRSFAYLKTEAIGYALNDA 91 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~----------------~~p~-~~a~~nla~~~~~~g~~~~Al~~~ 91 (546)
++..+.+..+..+|+.++++|+|++|+..|++|++ .+|. ..+|.++|.+|.++|+|++|++++
T Consensus 217 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 296 (370)
T 1ihg_A 217 DKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSC 296 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 45667788899999999999999999999999998 6664 799999999999999999999999
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhh
Q psy11688 92 SKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 92 ~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~ 153 (546)
++|++++|+++++|+++|.+|..+|++++|+++|++|++++|++..++..++.++..+++.+
T Consensus 297 ~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~ 358 (370)
T 1ihg_A 297 LEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQK 358 (370)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988888887766554
No 61
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.52 E-value=4.7e-14 Score=137.22 Aligned_cols=109 Identities=20% Similarity=0.253 Sum_probs=101.6
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---cHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT----AIYYANRSFAYLKTEAIGYALNDASKAIELDQT---YTK 103 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~---~~~ 103 (546)
++..++.++.+|..+++.|+|++|+..|+++++.+|+ ..+++.+|.+|.++|++++|+..++++++++|+ .+.
T Consensus 11 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~ 90 (261)
T 3qky_A 11 RHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQ 90 (261)
T ss_dssp CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHH
Confidence 4455789999999999999999999999999999994 789999999999999999999999999999884 477
Q ss_pred HHHHHHHHHHH--------hcChHHHHHHHHHhhccCCCCcchh
Q psy11688 104 AYYRRAAAYMS--------LGKFKLALRDYEAVHKARPNDKDAK 139 (546)
Q Consensus 104 a~~~lg~~~~~--------~g~~~eA~~~~~kal~l~P~~~~~~ 139 (546)
+++.+|.++.. +|++++|+..|+++++.+|++..+.
T Consensus 91 a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 91 AEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 99999999999 9999999999999999999988776
No 62
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.52 E-value=2e-14 Score=137.94 Aligned_cols=103 Identities=27% Similarity=0.407 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc-------HHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTY-------TKA 104 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~-------~~a 104 (546)
+..++.+..+|..++..|+|++|+..|+++++.+++..++.++|.++..+|++++|+..++++++++|++ +.+
T Consensus 2 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 81 (258)
T 3uq3_A 2 GSMADKEKAEGNKFYKARQFDEAIEHYNKAWELHKDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKS 81 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHH
Confidence 5678999999999999999999999999999999558999999999999999999999999999999877 799
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHhhccCCC
Q psy11688 105 YYRRAAAYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 105 ~~~lg~~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
++.+|.++..+|++++|+..|+++++++|+
T Consensus 82 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 82 FARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 999999999999999999999999997665
No 63
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.51 E-value=4.1e-14 Score=142.32 Aligned_cols=214 Identities=16% Similarity=0.163 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAY 112 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 112 (546)
+++.++.+|..++..|+|++|+..|+++++.+|+ ..++.++|.++..+|++++|+..++++++++|++..++..+|.++
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 81 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLL 81 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 4678999999999999999999999999999995 999999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHHhhccCC---CCcchhcccccchhhhhhhhhh-hhchHHHHHHHHHHHHhhhhcCCcccccccccc
Q psy11688 113 MSLGKFKLALRDYEAVHKARP---NDKDAKAKFTECNKIVKRMQIK-GKLHRKYAYRILMDIKALFMTQDSLVHITVEDE 188 (546)
Q Consensus 113 ~~~g~~~eA~~~~~kal~l~P---~~~~~~~~l~~~~~~l~~~~~~-~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~ 188 (546)
...|++++|+..|+++++++| ++..++..++.+.......... .....+....++....+++...|....+....+
T Consensus 82 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
T 3ieg_A 82 LKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRA 161 (359)
T ss_dssp HHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 999999999999999999999 8888887775443322222111 111122333444555555555665554444444
Q ss_pred cccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCC
Q psy11688 189 AKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249 (546)
Q Consensus 189 ~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~ 249 (546)
..+...|+...+...+.++++.. |.....+..+|...-+-.+..+++..+.......|+
T Consensus 162 ~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 220 (359)
T 3ieg_A 162 ECFIKEGEPRKAISDLKAASKLK--SDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQD 220 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTC--SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHCCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc
Confidence 45566677777777777776653 222334555665554444555666655554444443
No 64
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.51 E-value=2e-14 Score=139.79 Aligned_cols=207 Identities=9% Similarity=-0.009 Sum_probs=138.1
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT----AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYY 106 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~ 106 (546)
+|+.+..+..+|.+++..|++++|+..|+++++..++ ..+|.++|.++..+|++++|+..++++++++|+++.++.
T Consensus 33 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 112 (272)
T 3u4t_A 33 KYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYG 112 (272)
T ss_dssp TCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHH
Confidence 3344557788888888899999999999998883322 567888999999999999999999999999998888899
Q ss_pred HHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccc-cchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCccccccc
Q psy11688 107 RRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFT-ECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITV 185 (546)
Q Consensus 107 ~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~-~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~ 185 (546)
.+|.+|..+|++++|++.|+++++++|++..++..++ .++... ++ + .++....+++...|.......
T Consensus 113 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~-~~--------~---~A~~~~~~a~~~~p~~~~~~~ 180 (272)
T 3u4t_A 113 QIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNK-EY--------V---KADSSFVKVLELKPNIYIGYL 180 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTT-CH--------H---HHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH-HH--------H---HHHHHHHHHHHhCccchHHHH
Confidence 9999999999999999999999988888888888877 554332 11 2 333344444555555433332
Q ss_pred ccccccccccc---cchhHhhHHHHHHHhCCCCCC------CCeeeeccccccCCChHHHHHHHhhhhhcCCC
Q psy11688 186 EDEAKFTVCGD---IHGQFYDLMNIFELNGLPSPD------NPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249 (546)
Q Consensus 186 ~~~~~~~viGD---ihg~~~~l~~il~~~~~~~~~------~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~ 249 (546)
..+......|+ ...+...+.++++.....+.. ..+..+|.+..+-.+..+++.++.......|+
T Consensus 181 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 253 (272)
T 3u4t_A 181 WRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPT 253 (272)
T ss_dssp HHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc
Confidence 33333445565 555666777777664222111 12444555544444455555555444444443
No 65
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.51 E-value=5.5e-14 Score=143.21 Aligned_cols=203 Identities=13% Similarity=0.038 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAY 112 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 112 (546)
.+..++.+|..+++.|++++|+..|+++++.+|+ ..++.++|.++..+|++++|+..++++++++|+++.++..+|.+|
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSY 143 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 4566899999999999999999999999999995 999999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHHhhccCCCCcchhccc----------ccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCc--c
Q psy11688 113 MSLGKFKLALRDYEAVHKARPNDKDAKAKF----------TECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDS--L 180 (546)
Q Consensus 113 ~~~g~~~eA~~~~~kal~l~P~~~~~~~~l----------~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~--~ 180 (546)
..+|++++|++.|+++++++|++..++..+ +.++...+++ ..++....+++...|. .
T Consensus 144 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-----------~~A~~~~~~al~~~p~~~~ 212 (365)
T 4eqf_A 144 TNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVL-----------EGVKELYLEAAHQNGDMID 212 (365)
T ss_dssp HHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHH-----------HHHHHHHHHHHHHSCSSCC
T ss_pred HccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhH-----------HHHHHHHHHHHHhCcCccC
Confidence 999999999999999999999988877665 5555444443 3444444555555555 2
Q ss_pred cccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCC
Q psy11688 181 VHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249 (546)
Q Consensus 181 ~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~ 249 (546)
..+....+..+...|+...+...+.++++..+ .....+..+|...-+-.+..+++..+.......|+
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 279 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRP--EDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPG 279 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 33322333445566777777777777777642 22334566776655555566666666555444554
No 66
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.50 E-value=6.2e-14 Score=138.75 Aligned_cols=106 Identities=28% Similarity=0.433 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAY 112 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 112 (546)
.+..++.+|..+++.|+|++|+..|++|++.+|+ ..+++++|.+|..+|++++|+++++++++++|+++.+++++|.+|
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4678999999999999999999999999999995 999999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHHhhccCCCCcchh
Q psy11688 113 MSLGKFKLALRDYEAVHKARPNDKDAK 139 (546)
Q Consensus 113 ~~~g~~~eA~~~~~kal~l~P~~~~~~ 139 (546)
..+|++++|++.|+++++++|++...+
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p~~~~~~ 109 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAKEQRLNF 109 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHcCCHHHHHHHHHHHHHhCccchhhH
Confidence 999999999999999999999875443
No 67
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.50 E-value=2.1e-13 Score=129.75 Aligned_cols=171 Identities=18% Similarity=0.171 Sum_probs=142.0
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR 107 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~ 107 (546)
..+|..+..+..+|.++...|++++|+..|+++++.+|+ ..++..+|.++..+|++++|++.++++++++|+++.++..
T Consensus 51 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 130 (243)
T 2q7f_A 51 EENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYM 130 (243)
T ss_dssp TTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHH
T ss_pred HhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 455667889999999999999999999999999999995 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCccccccccc
Q psy11688 108 RAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVED 187 (546)
Q Consensus 108 lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~ 187 (546)
+|.++..+|++++|++.++++++.+|++..++..++.++...++.+ .+...++ +++...|....+....
T Consensus 131 ~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~A~~~~~---~~~~~~~~~~~~~~~l 199 (243)
T 2q7f_A 131 LGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLD--------EALSQFA---AVTEQDPGHADAFYNA 199 (243)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCH--------HHHHHHH---HHHHHCTTCHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHH--------HHHHHHH---HHHHhCcccHHHHHHH
Confidence 9999999999999999999999999999999998888887776663 2333333 3344445433333333
Q ss_pred ccccccccccchhHhhHHHHHHH
Q psy11688 188 EAKFTVCGDIHGQFYDLMNIFEL 210 (546)
Q Consensus 188 ~~~~~viGDihg~~~~l~~il~~ 210 (546)
+..+...|+...+...+.++++.
T Consensus 200 a~~~~~~~~~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 200 GVTYAYKENREKALEMLDKAIDI 222 (243)
T ss_dssp HHHHHHTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHcc
Confidence 44456677777777777777775
No 68
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.50 E-value=3.3e-14 Score=151.51 Aligned_cols=176 Identities=11% Similarity=0.023 Sum_probs=142.9
Q ss_pred hHHHHHHHHHHHHHHHHccCH-HHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAY-NKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~-~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.+..+..++.+|..++..|+| ++|+..|++|++++|+ ..+|+++|.+|..+|++++|++.|+++++++|+ ..++..+
T Consensus 98 ~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~l 176 (474)
T 4abn_A 98 AQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNL 176 (474)
T ss_dssp CCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHH
T ss_pred CchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHH
Confidence 345678899999999999999 9999999999999996 999999999999999999999999999999999 7999999
Q ss_pred HHHHHHh---------cChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCC-
Q psy11688 109 AAAYMSL---------GKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQD- 178 (546)
Q Consensus 109 g~~~~~~---------g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p- 178 (546)
|.++..+ |++++|++.|+++++++|++..++..++.++...- +..+. ..+...+++..+.+++...|
T Consensus 177 g~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~-~~~~~--~~g~~~~A~~~~~~al~~~p~ 253 (474)
T 4abn_A 177 SMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLY-FNTGQ--NPKISQQALSAYAQAEKVDRK 253 (474)
T ss_dssp HHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-HHTTC--CHHHHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-Hhhcc--ccchHHHHHHHHHHHHHhCCC
Confidence 9999999 99999999999999999999999999999987660 00000 11223344555555555566
Q ss_pred --cccccccccccccccccccchhHhhHHHHHHH
Q psy11688 179 --SLVHITVEDEAKFTVCGDIHGQFYDLMNIFEL 210 (546)
Q Consensus 179 --~~~~i~~~~~~~~~viGDihg~~~~l~~il~~ 210 (546)
.........+..+...|+...+...+.++++.
T Consensus 254 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 287 (474)
T 4abn_A 254 ASSNPDLHLNRATLHKYEESYGEALEGFSQAAAL 287 (474)
T ss_dssp GGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 55554444455566677777777777777776
No 69
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.49 E-value=1.4e-13 Score=118.01 Aligned_cols=111 Identities=16% Similarity=0.131 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-H---HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc---HHHHHHH
Q psy11688 36 EKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-A---IYYANRSFAYLKTEAIGYALNDASKAIELDQTY---TKAYYRR 108 (546)
Q Consensus 36 ~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~---~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~---~~a~~~l 108 (546)
++++.+|..++..|+|++|+..|+++++.+|+ . .+++++|.++..+|++++|+..++++++.+|++ +.+++.+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 45788999999999999999999999999995 3 799999999999999999999999999999999 8999999
Q ss_pred HHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccch
Q psy11688 109 AAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECN 146 (546)
Q Consensus 109 g~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~ 146 (546)
|.++..+|++++|+..|+++++..|+++.+......+.
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~ 120 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQ 120 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHH
Confidence 99999999999999999999999999887655444433
No 70
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.49 E-value=1.6e-13 Score=117.07 Aligned_cols=118 Identities=27% Similarity=0.400 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc-------HHH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY-------TKA 104 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~-------~~a 104 (546)
+.++.+..+|..++..|++++|+..|+++++.+|+ ..++.++|.++...|++++|+..++++++++|++ ..+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 56788999999999999999999999999999995 8999999999999999999999999999999887 999
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhh
Q psy11688 105 YYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKR 151 (546)
Q Consensus 105 ~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~ 151 (546)
++.+|.++..+|++++|++.|++++++.| ++.....++.+...+++
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998 57777666666654443
No 71
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.49 E-value=1.7e-13 Score=132.91 Aligned_cols=187 Identities=14% Similarity=0.103 Sum_probs=127.4
Q ss_pred ccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhhc-
Q psy11688 190 KFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYG- 268 (546)
Q Consensus 190 ~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~- 268 (546)
++.++||+||++..+.++++... ..+.++++||++++|+++.+++..+..+. .+++++||||.........
T Consensus 5 ri~~isDiHg~~~~l~~~l~~~~---~~d~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~~~~ 76 (246)
T 3rqz_A 5 RILIISDVHANLVALEAVLSDAG---RVDDIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACIGRLSLD 76 (246)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHC---SCSEEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHTCCCCCC
T ss_pred EEEEEeecCCCHHHHHHHHHhcc---CCCEEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHhccCCcc
Confidence 58899999999999999999876 45679999999999999999999998874 2789999999987654322
Q ss_pred -ch---hhhhhhchHHHHHHHHHhhccccceeeecceEEEEeCCccCCCCCChhhhhccCCCCCCCCchhhhhhhcCCCC
Q psy11688 269 -FE---GEVKSKYTDLMAQFFTEVYNWLPLCHCINNKVLVMHGGLFSSDNVTLEDIRTIDRNRQPPDEGLMCELLWSDPQ 344 (546)
Q Consensus 269 -~~---~e~~~~~~~~~~~~~~~~~~~lP~~~~~~~~~~~vHgGi~~~~~~~~~~i~~~~r~~~~~~~~~~~dllWsdp~ 344 (546)
+. ..........+.....+++..||.....+ +++++||++.++. |.
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~-~i~~~Hg~p~~~~--------------------------~~--- 126 (246)
T 3rqz_A 77 EFNPVARFASYWTTMQLQAEHLQYLESLPNRMIDG-DWTVVHGSPRHPI--------------------------WE--- 126 (246)
T ss_dssp --CGGGGCHHHHHHHHCCHHHHHHHHHCCSEEEET-TEEEESSCSSSTT--------------------------TC---
T ss_pred ccCHHHHHHHHHHHHHcCHHHHHHHHhCCcEEEEC-CEEEEECCcCCcc--------------------------cc---
Confidence 11 11111113334455668899999987766 8999999982210 00
Q ss_pred CCCCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEEEeccccccCceE--------------------eCCCeEEEEeCCCC
Q psy11688 345 IPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVKQDGYEV--------------------AHDGRCITVFSAPN 404 (546)
Q Consensus 345 ~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~--------------------~~~~~~itifsa~~ 404 (546)
+.+....+.+.++..+.+++|-||+-.+..+.. ..+..++..=|...
T Consensus 127 -------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~ 193 (246)
T 3rqz_A 127 -------------YIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQ 193 (246)
T ss_dssp -------------CCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSC
T ss_pred -------------ccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeecCCCeEEEECCccCC
Confidence 011335677778889999999999987543331 11344555555422
Q ss_pred CCCCCCCceeEEEeeCCCCceeEE
Q psy11688 405 YCDSVGNKGAFITMKGKDMVPHFT 428 (546)
Q Consensus 405 y~~~~~n~~a~~~~~~~~~~~~~~ 428 (546)
--+ ....+++++++..+.+++|+
T Consensus 194 Prd-g~p~A~Y~i~d~~~~~v~~~ 216 (246)
T 3rqz_A 194 PRD-GDPRASYAIFEPDAQRVTFH 216 (246)
T ss_dssp CCS-SCCSEEEEEEEGGGTEEEEE
T ss_pred CCC-cCCcceEEEEECCCCEEEEE
Confidence 111 24568888886544444444
No 72
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.48 E-value=3.4e-13 Score=126.99 Aligned_cols=88 Identities=18% Similarity=0.084 Sum_probs=81.5
Q ss_pred hhhHHHHHHHHH----------------HHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHH
Q psy11688 29 VEDKERAEKLKA----------------EANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDA 91 (546)
Q Consensus 29 ~~~~~~a~~~~~----------------~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~ 91 (546)
..+|+.+++++. +|.++.+.|++++|+..|+++++++|+ ..+++++|.++..+|++++|++.|
T Consensus 32 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 111 (208)
T 3urz_A 32 ALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMY 111 (208)
T ss_dssp HHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 567888888888 999999999999999999999999995 999999999999999999999999
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHhc
Q psy11688 92 SKAIELDQTYTKAYYRRAAAYMSLG 116 (546)
Q Consensus 92 ~~al~l~p~~~~a~~~lg~~~~~~g 116 (546)
+++++++|+++.+|+.+|.+|...+
T Consensus 112 ~~al~~~P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 112 EKILQLEADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999998876543
No 73
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.48 E-value=6.2e-14 Score=124.90 Aligned_cols=96 Identities=16% Similarity=0.176 Sum_probs=87.6
Q ss_pred HHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCH----------HHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q psy11688 46 FKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAI----------GYALNDASKAIELDQTYTKAYYRRAAAYMS 114 (546)
Q Consensus 46 ~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~----------~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 114 (546)
-+.+.|++|+..|++|++++|+ +.+|+++|.++..++++ ++|+..|++|++++|++..+|+++|.+|..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 3567889999999999999995 99999999999999876 599999999999999999999999999998
Q ss_pred hc-----------ChHHHHHHHHHhhccCCCCcchhcc
Q psy11688 115 LG-----------KFKLALRDYEAVHKARPNDKDAKAK 141 (546)
Q Consensus 115 ~g-----------~~~eA~~~~~kal~l~P~~~~~~~~ 141 (546)
+| ++++|+++|++|++++|++..++..
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~a 130 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKS 130 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 85 8999999999999999998655433
No 74
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.48 E-value=1.3e-13 Score=137.34 Aligned_cols=210 Identities=11% Similarity=-0.056 Sum_probs=146.7
Q ss_pred hhHHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQ-AYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR 107 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g-~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~ 107 (546)
.+|+.+..+..+|..+...| ++++|+..|+++++.+|+ ..++..+|.++...|++++|++.++++++++|++..++..
T Consensus 85 ~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 164 (330)
T 3hym_B 85 LYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLY 164 (330)
T ss_dssp HCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHH
T ss_pred hCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHH
Confidence 34555677888888888888 888888888888888885 7888888888888888888888888888888888888888
Q ss_pred HHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcC------Cccc
Q psy11688 108 RAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQ------DSLV 181 (546)
Q Consensus 108 lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~------p~~~ 181 (546)
+|.++...|++++|++.|+++++.+|++..++..++.++...++. +.+...++++.+..... |...
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~--------~~A~~~~~~a~~~~~~~~~~~~~~~~~ 236 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEW--------KTAEKWFLDALEKIKAIGNEVTVDKWE 236 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHTTTSCSCTTTTCC
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccH--------HHHHHHHHHHHHHhhhccccccccHHH
Confidence 888888888888888888888888888888888888887776665 33444555555444322 2212
Q ss_pred ccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCC
Q psy11688 182 HITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249 (546)
Q Consensus 182 ~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~ 249 (546)
.+....+..+...|+...+...+.++++.. |.....+..+|....+-.+..+++..+.......|+
T Consensus 237 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 302 (330)
T 3hym_B 237 PLLNNLGHVCRKLKKYAEALDYHRQALVLI--PQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRD 302 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhC--ccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCC
Confidence 222223334555677777777777777763 223334555666554444555666655554444443
No 75
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.48 E-value=7.5e-14 Score=148.73 Aligned_cols=165 Identities=15% Similarity=0.127 Sum_probs=140.8
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHc---------cCHHHHHHHHHHHHHhCC
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKT---------EAIGYALNDASKAIELDQ 99 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~---------g~~~~Al~~~~~al~l~p 99 (546)
..+|+.++++..+|.++++.|++++|+..|++|++++|+..++.++|.++..+ |++++|++.++++++++|
T Consensus 131 ~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p 210 (474)
T 4abn_A 131 KLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDV 210 (474)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred hhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCC
Confidence 55677788999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CcHHHHHHHHHHHHHh--------cChHHHHHHHHHhhccCC---CCcchhcccccchhhhhhhhhhhhchHHHHHHHHH
Q psy11688 100 TYTKAYYRRAAAYMSL--------GKFKLALRDYEAVHKARP---NDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILM 168 (546)
Q Consensus 100 ~~~~a~~~lg~~~~~~--------g~~~eA~~~~~kal~l~P---~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~ 168 (546)
+++.+|+.+|.+|..+ |++++|+++|+++++++| +++.++..++.++...++++ +++.
T Consensus 211 ~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~-----------~A~~ 279 (474)
T 4abn_A 211 LDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYG-----------EALE 279 (474)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHH-----------HHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHH-----------HHHH
Confidence 9999999999999999 999999999999999999 99999999999998887763 3444
Q ss_pred HHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHh
Q psy11688 169 DIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 169 ~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~ 211 (546)
.+.+++...|..... ....+.+......+.++++..
T Consensus 280 ~~~~al~l~p~~~~a-------~~~l~~~~~~lg~~~eAi~~~ 315 (474)
T 4abn_A 280 GFSQAAALDPAWPEP-------QQREQQLLEFLSRLTSLLESK 315 (474)
T ss_dssp HHHHHHHHCTTCHHH-------HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCHHH-------HHHHHHHHHHHHHHHHHHHHh
Confidence 455555556654432 344566666666666666543
No 76
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.48 E-value=3e-13 Score=128.86 Aligned_cols=107 Identities=19% Similarity=0.275 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHH---HHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT----AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTK---AYYR 107 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~---a~~~ 107 (546)
++.++.+|..+++.|+|++|+..|+++++..|+ ..+++++|.++.++|++++|++.|+++++++|+++. +++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 567899999999999999999999999999994 579999999999999999999999999999999864 8999
Q ss_pred HHHHHHH------------------hcChHHHHHHHHHhhccCCCCcchhcc
Q psy11688 108 RAAAYMS------------------LGKFKLALRDYEAVHKARPNDKDAKAK 141 (546)
Q Consensus 108 lg~~~~~------------------~g~~~eA~~~~~kal~l~P~~~~~~~~ 141 (546)
+|.++.. +|++++|+..|+++++..|++..+...
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a 135 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDA 135 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHH
Confidence 9999987 579999999999999999999876543
No 77
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.48 E-value=1.8e-13 Score=123.85 Aligned_cols=169 Identities=14% Similarity=0.124 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
...+..+..+|..++..|++++|+..++++++.+|+ ..++..+|.++...|++++|+..++++++.+|++..++..+|.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 84 (186)
T 3as5_A 5 DIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGL 84 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 345778899999999999999999999999999995 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccccccc
Q psy11688 111 AYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAK 190 (546)
Q Consensus 111 ~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~ 190 (546)
++...|++++|++.++++++.+|++..++..++.++...++. +.+...++ +++...|.........+..
T Consensus 85 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~A~~~~~---~~~~~~~~~~~~~~~la~~ 153 (186)
T 3as5_A 85 TYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRF--------DEAIDSFK---IALGLRPNEGKVHRAIAFS 153 (186)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH--------HHHHHHHH---HHHHHCTTCHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcH--------HHHHHHHH---HHHhcCccchHHHHHHHHH
Confidence 999999999999999999999999999988888888776665 23333333 3333344433333333344
Q ss_pred cccccccchhHhhHHHHHHHh
Q psy11688 191 FTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 191 ~~viGDihg~~~~l~~il~~~ 211 (546)
....|+...+...+.++++..
T Consensus 154 ~~~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 154 YEQMGRHEEALPHFKKANELD 174 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHcC
Confidence 556677777777777777654
No 78
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.48 E-value=4.6e-13 Score=112.93 Aligned_cols=114 Identities=30% Similarity=0.459 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAY 112 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 112 (546)
.+..+...|..+...|++++|+..|+++++.+|+ ..++.++|.++...|++++|+..++++++.+|+++.+++.+|.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 3778899999999999999999999999999995 899999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHHhhccCCCCcchhcccccchh
Q psy11688 113 MSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 113 ~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
...|++++|+..|+++++.+|++..++..++.++.
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999988877766553
No 79
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.47 E-value=2.6e-14 Score=127.97 Aligned_cols=100 Identities=13% Similarity=-0.018 Sum_probs=94.3
Q ss_pred HHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccC
Q psy11688 54 AIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKAR 132 (546)
Q Consensus 54 Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~ 132 (546)
+-..++++++++|+ ..+++++|.++.++|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+.+|+++++++
T Consensus 21 ~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 21 SGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG 100 (151)
T ss_dssp TSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 33567888899995 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchhcccccchhhhhhhh
Q psy11688 133 PNDKDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 133 P~~~~~~~~l~~~~~~l~~~~ 153 (546)
|+++.++..++.++..+++.+
T Consensus 101 P~~~~~~~~lg~~~~~lg~~~ 121 (151)
T 3gyz_A 101 KNDYTPVFHTGQCQLRLKAPL 121 (151)
T ss_dssp SSCCHHHHHHHHHHHHTTCHH
T ss_pred CCCcHHHHHHHHHHHHcCCHH
Confidence 999999999999999888873
No 80
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.47 E-value=4.9e-13 Score=125.22 Aligned_cols=119 Identities=17% Similarity=0.204 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAA 111 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~ 111 (546)
...+..++.+|..++..|+|++|+..|++++ +|++.+++++|.++..+|++++|+..++++++++|+++.+++++|.+
T Consensus 3 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~ 80 (213)
T 1hh8_A 3 LVEAISLWNEGVLAADKKDWKGALDAFSAVQ--DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 80 (213)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 3456778999999999999999999999995 67899999999999999999999999999999999999999999999
Q ss_pred HHHhcChHHHHHHHHHhhccCCCCc----------------chhcccccchhhhhhh
Q psy11688 112 YMSLGKFKLALRDYEAVHKARPNDK----------------DAKAKFTECNKIVKRM 152 (546)
Q Consensus 112 ~~~~g~~~eA~~~~~kal~l~P~~~----------------~~~~~l~~~~~~l~~~ 152 (546)
|..+|++++|++.|++++++.|++. .++..++.++...++.
T Consensus 81 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 137 (213)
T 1hh8_A 81 YYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEW 137 (213)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCH
T ss_pred HHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCH
Confidence 9999999999999999999999877 6677777777666554
No 81
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.47 E-value=1.3e-13 Score=114.29 Aligned_cols=104 Identities=17% Similarity=0.222 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--cHHHHHHHH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQT--YTKAYYRRA 109 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~--~~~a~~~lg 109 (546)
+.+..+..+|..++..|++++|+..|+++++.+|+ ..++.++|.++..+|++++|++.++++++++|+ +..+++.+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 4 QNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp SSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 34566788999999999999999999999999995 899999999999999999999999999999999 999999999
Q ss_pred HHHHHh-cChHHHHHHHHHhhccCCCCc
Q psy11688 110 AAYMSL-GKFKLALRDYEAVHKARPNDK 136 (546)
Q Consensus 110 ~~~~~~-g~~~eA~~~~~kal~l~P~~~ 136 (546)
.++..+ |++++|+++++++++..|.++
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999999 999999999999999999764
No 82
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.47 E-value=5.7e-14 Score=156.39 Aligned_cols=143 Identities=13% Similarity=-0.042 Sum_probs=128.7
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.+|+.++++..+|..+++.|++++|+..|+++++.+|+ ..+|+++|.++..+|++++|++.|++|++++|+++.+|+++
T Consensus 428 ~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~l 507 (681)
T 2pzi_A 428 DFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLAL 507 (681)
T ss_dssp CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHH
T ss_pred ccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 44667788999999999999999999999999999995 89999999999999999999999999999999999999999
Q ss_pred HHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccc
Q psy11688 109 AAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHIT 184 (546)
Q Consensus 109 g~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~ 184 (546)
|.++..+|++++ ++.|+++++++|++..++.+++.++...++++ +++..+.+++...|......
T Consensus 508 g~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~-----------~A~~~~~~al~l~P~~~~a~ 571 (681)
T 2pzi_A 508 AATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRV-----------GAVRTLDEVPPTSRHFTTAR 571 (681)
T ss_dssp HHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-----------HHHHHHHTSCTTSTTHHHHH
T ss_pred HHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHH-----------HHHHHHHhhcccCcccHHHH
Confidence 999999999999 99999999999999999999999998877663 45555666677777655443
No 83
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.46 E-value=1.1e-13 Score=119.73 Aligned_cols=112 Identities=18% Similarity=0.184 Sum_probs=97.1
Q ss_pred HHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcch
Q psy11688 60 AAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA 138 (546)
Q Consensus 60 ~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~ 138 (546)
++..+||+ +.++.++|.++++.|+|++|++.|+++++++|+++.+|+++|.+|..+|++++|+++|+++++++|++..+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 44568896 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccc
Q psy11688 139 KAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVH 182 (546)
Q Consensus 139 ~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~ 182 (546)
+..++.++..+++++ +++....+++..+|+...
T Consensus 84 ~~~lg~~~~~~~~~~-----------~A~~~~~~al~l~P~~~~ 116 (126)
T 4gco_A 84 YIRKAACLVAMREWS-----------KAQRAYEDALQVDPSNEE 116 (126)
T ss_dssp HHHHHHHHHHTTCHH-----------HHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHCCCHH-----------HHHHHHHHHHHHCcCCHH
Confidence 999999998887763 344555556666666444
No 84
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.46 E-value=1.4e-13 Score=137.00 Aligned_cols=219 Identities=11% Similarity=-0.003 Sum_probs=142.1
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRA 109 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg 109 (546)
.++++..+..+|..++..|+|++|+..|+++++.+|+ ..++..++.++..+|++++|+..++++++.+|+++.+|+.+|
T Consensus 18 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 97 (330)
T 3hym_B 18 LQENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVG 97 (330)
T ss_dssp --CCCTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHH
Confidence 3444556777888888888888888888888888884 667777888888888888888888888888888888888888
Q ss_pred HHHHHhc-ChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhh-----------------------chHHHHHH
Q psy11688 110 AAYMSLG-KFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGK-----------------------LHRKYAYR 165 (546)
Q Consensus 110 ~~~~~~g-~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~-----------------------l~~~~~~~ 165 (546)
.++...| ++++|++.|+++++++|++..++..++.++...++++.... ...+....
T Consensus 98 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~ 177 (330)
T 3hym_B 98 CYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKL 177 (330)
T ss_dssp HHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHH
Confidence 8888888 78888888888888888888887777777766665543100 00111223
Q ss_pred HHHHHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCC-------CCCCCCeeeeccccccCCChHHHHH
Q psy11688 166 ILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGL-------PSPDNPYLFNGDFVDRGSFSVECIF 238 (546)
Q Consensus 166 il~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~-------~~~~~~~~~lGD~vdrG~~~~e~l~ 238 (546)
++....+++...|....+....+..+...|+...+...+.++++.... +.....+..+|...-+-.+..+++.
T Consensus 178 A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 257 (330)
T 3hym_B 178 AERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALD 257 (330)
T ss_dssp HHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 344444555555554443333344455667777777777777766422 1112234556655544445556666
Q ss_pred HHhhhhhcCCC
Q psy11688 239 TLFGFKLLYPN 249 (546)
Q Consensus 239 ~l~~l~~~~p~ 249 (546)
.+.......|+
T Consensus 258 ~~~~a~~~~~~ 268 (330)
T 3hym_B 258 YHRQALVLIPQ 268 (330)
T ss_dssp HHHHHHHHSTT
T ss_pred HHHHHHhhCcc
Confidence 55554444443
No 85
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.46 E-value=1.3e-12 Score=126.94 Aligned_cols=198 Identities=13% Similarity=0.074 Sum_probs=124.4
Q ss_pred ccccccccchhHhhHHHHHHHhC---CCC-CCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhh
Q psy11688 190 KFTVCGDIHGQFYDLMNIFELNG---LPS-PDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQ 265 (546)
Q Consensus 190 ~~~viGDihg~~~~l~~il~~~~---~~~-~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 265 (546)
+++++||+||+...+.++++... ..+ ..+.++++||++|+|+.+.+++..+.++.... .+++++||||.+....
T Consensus 3 ~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNhD~~~~~~ 80 (252)
T 1nnw_A 3 YVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKYDQIIAMS 80 (252)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHHHHHHHHS
T ss_pred EEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecchHHHhhcc
Confidence 37889999999999998888764 221 34679999999999999999999998876432 4999999999877643
Q ss_pred hhcch--h------------hhhhhchHHHHHHHHHhhccccceeee--c-ceEEEEeCCccCCCCCChhhhhccCCCCC
Q psy11688 266 IYGFE--G------------EVKSKYTDLMAQFFTEVYNWLPLCHCI--N-NKVLVMHGGLFSSDNVTLEDIRTIDRNRQ 328 (546)
Q Consensus 266 ~~~~~--~------------e~~~~~~~~~~~~~~~~~~~lP~~~~~--~-~~~~~vHgGi~~~~~~~~~~i~~~~r~~~ 328 (546)
..... . .........+.....+++..+|....+ + .+++++||++..+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~~-------------- 146 (252)
T 1nnw_A 81 DPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFD-------------- 146 (252)
T ss_dssp CTTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTT--------------
T ss_pred ccccCCcccccchhhhHHHHHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCcc--------------
Confidence 21110 0 000111223444556888899987655 3 389999999721100
Q ss_pred CCCchhhhhhhcCCCCCCCCCCCCCCCCeeeeCHHHHHHHHHhc-CCcEEEEeccccccCceEeCCCeEEEEeCCCCCCC
Q psy11688 329 PPDEGLMCELLWSDPQIPNGRAPSKRGVGVHFGPDVTKAFLERN-KLEYIIRSHEVKQDGYEVAHDGRCITVFSAPNYCD 407 (546)
Q Consensus 329 ~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~-~~~~iir~H~~~~~G~~~~~~~~~itifsa~~y~~ 407 (546)
+.+|.+ -+.+.+.++++.. +.+++|-||+..+..... ++.++.-=.|..+.-
T Consensus 147 --------~~~~~~-----------------~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~--~~~~~in~Gs~~~~~ 199 (252)
T 1nnw_A 147 --------GEVLAE-----------------QPTSYYEAIMRPVKDYEMLIVASPMYPVDAMT--RYGRVVCPGSVGFPP 199 (252)
T ss_dssp --------CCCCSS-----------------CCHHHHHHHHGGGTTSSEEEESTTCSEEEEEE--TTEEEEEECCSSSCS
T ss_pred --------cccCCC-----------------CCHHHHHHHHhcCCCCCEEEECCccccceEec--CCeEEEECCCccCCC
Confidence 011110 0235677788887 999999999987654432 443321112222211
Q ss_pred CCCCceeEEEeeCCCCceeEEEE
Q psy11688 408 SVGNKGAFITMKGKDMVPHFTTY 430 (546)
Q Consensus 408 ~~~n~~a~~~~~~~~~~~~~~~~ 430 (546)
.....++++.++..+.++++...
T Consensus 200 ~~~~~~~y~il~~~~~~v~~~~v 222 (252)
T 1nnw_A 200 GKEHKATFALVDVDTLKPKFIEV 222 (252)
T ss_dssp SSSCCEEEEEEETTTCCEEEEEE
T ss_pred CCCCcceEEEEECCCCeEEEEEe
Confidence 11125677777555566665543
No 86
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.45 E-value=7e-13 Score=134.56 Aligned_cols=212 Identities=12% Similarity=0.047 Sum_probs=151.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYM 113 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 113 (546)
+..++.+|..+++.|++++|+..|+++++.+|+ ..++.++|.++..+|++++|+..++++++++|+++.++..+|.++.
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 143 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFT 143 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999995 8999999999999999999999999999999999999999999999
Q ss_pred HhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhh----hhhhhchHHHHHHHHHHHHhhhhcCCc--cccccccc
Q psy11688 114 SLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRM----QIKGKLHRKYAYRILMDIKALFMTQDS--LVHITVED 187 (546)
Q Consensus 114 ~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~----~~~~~l~~~~~~~il~~a~eiL~~~p~--~~~i~~~~ 187 (546)
.+|++++|++.|+++++++|++..++..+..+....... ..+..+..+....++....+++...|. ...+....
T Consensus 144 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l 223 (368)
T 1fch_A 144 NESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGL 223 (368)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHH
Confidence 999999999999999999999888775431110000000 001111223444555555566666666 33333333
Q ss_pred ccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCC
Q psy11688 188 EAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYP 248 (546)
Q Consensus 188 ~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p 248 (546)
+..+...|+...+...+.++++.. |.....+..+|...-+-.+..+++..+.......|
T Consensus 224 ~~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 282 (368)
T 1fch_A 224 GVLFNLSGEYDKAVDCFTAALSVR--PNDYLLWNKLGATLANGNQSEEAVAAYRRALELQP 282 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhC--cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 444556677777777777777763 22233456677665555566666666655544444
No 87
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.45 E-value=7.8e-13 Score=128.28 Aligned_cols=113 Identities=24% Similarity=0.185 Sum_probs=106.6
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.+|..+..+..+|..++..|++++|+..|+++++.+|+ ..++.++|.++...|++++|+..++++++++|+++.+++.+
T Consensus 38 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l 117 (275)
T 1xnf_A 38 TDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNR 117 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred cCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHH
Confidence 36788999999999999999999999999999999995 89999999999999999999999999999999999999999
Q ss_pred HHHHHHhcChHHHHHHHHHhhccCCCCcchhccc
Q psy11688 109 AAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKF 142 (546)
Q Consensus 109 g~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l 142 (546)
|.++..+|++++|++.|+++++++|++.......
T Consensus 118 a~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 151 (275)
T 1xnf_A 118 GIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWL 151 (275)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 9999999999999999999999999988655443
No 88
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.45 E-value=3.2e-14 Score=144.94 Aligned_cols=207 Identities=12% Similarity=0.032 Sum_probs=148.2
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR 107 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~ 107 (546)
..+|+.+..+..+|.++...|++++|+..|+++++++|+ ..++.++|.+|..+|++++|+..++++++++|++..++..
T Consensus 93 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 172 (365)
T 4eqf_A 93 LQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKN 172 (365)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC---
T ss_pred HhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhh
Confidence 345667888999999999999999999999999999995 9999999999999999999999999999999998777766
Q ss_pred H----------HHHHHHhcChHHHHHHHHHhhccCCC--CcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhh
Q psy11688 108 R----------AAAYMSLGKFKLALRDYEAVHKARPN--DKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFM 175 (546)
Q Consensus 108 l----------g~~~~~~g~~~eA~~~~~kal~l~P~--~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~ 175 (546)
+ |.++...|++++|++.|+++++++|+ ++.++..++.++...++++ +++....+++.
T Consensus 173 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~-----------~A~~~~~~al~ 241 (365)
T 4eqf_A 173 KKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFN-----------RAIDAFNAALT 241 (365)
T ss_dssp ----------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHH-----------HHHHHHHHHHH
T ss_pred hccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHH-----------HHHHHHHHHHH
Confidence 5 99999999999999999999999999 7888888888887766652 33344444455
Q ss_pred cCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCC
Q psy11688 176 TQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYP 248 (546)
Q Consensus 176 ~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p 248 (546)
..|....+....+..+...|+...+...+.++++.. |.....+..+|...-+-.+..+++..+.......|
T Consensus 242 ~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 312 (365)
T 4eqf_A 242 VRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQ--PGFIRSRYNLGISCINLGAYREAVSNFLTALSLQR 312 (365)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 555544444444455666777777777777777763 22233455566554433344455544444333333
No 89
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.44 E-value=1.8e-12 Score=117.20 Aligned_cols=121 Identities=16% Similarity=0.178 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
|+.+..+...|..+...|++++|+..++++++.+|+ ..++.++|.++...|++++|++.++++++.+|+++.++..+|.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 118 (186)
T 3as5_A 39 AFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGV 118 (186)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHH
Confidence 344678899999999999999999999999999995 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhh
Q psy11688 111 AYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRM 152 (546)
Q Consensus 111 ~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~ 152 (546)
++...|++++|++.++++++.+|++..++..++.++...++.
T Consensus 119 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 160 (186)
T 3as5_A 119 ALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRH 160 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCH
Confidence 999999999999999999999999999999999988877765
No 90
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.43 E-value=8.4e-13 Score=126.75 Aligned_cols=170 Identities=12% Similarity=-0.019 Sum_probs=136.9
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHH--hCCCcHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIE--LDQTYTKAYY 106 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~--l~p~~~~a~~ 106 (546)
.+|..+..+..+|..+...|++++|+..|+++++.+|+ ..++.++|.++...|++++|++.++++++ .+|.+..++.
T Consensus 66 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~ 145 (252)
T 2ho1_A 66 IDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFE 145 (252)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHH
T ss_pred cCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHH
Confidence 34556778999999999999999999999999999995 89999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccc
Q psy11688 107 RRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVE 186 (546)
Q Consensus 107 ~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~ 186 (546)
.+|.++...|++++|++.|+++++.+|++..++..++.++...++. ..+...+ .+++...|........
T Consensus 146 ~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~--------~~A~~~~---~~~~~~~~~~~~~~~~ 214 (252)
T 2ho1_A 146 NLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREY--------VPARQYY---DLFAQGGGQNARSLLL 214 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCH--------HHHHHHH---HHHHTTSCCCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCH--------HHHHHHH---HHHHHhCcCcHHHHHH
Confidence 9999999999999999999999999999999999888888777665 3333333 3344445543332222
Q ss_pred cccccccccccchhHhhHHHHHHH
Q psy11688 187 DEAKFTVCGDIHGQFYDLMNIFEL 210 (546)
Q Consensus 187 ~~~~~~viGDihg~~~~l~~il~~ 210 (546)
.+......|+...+...+.++++.
T Consensus 215 ~~~~~~~~g~~~~A~~~~~~~~~~ 238 (252)
T 2ho1_A 215 GIRLAKVFEDRDTAASYGLQLKRL 238 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHH
Confidence 222344566666666666666665
No 91
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.43 E-value=1.2e-12 Score=130.08 Aligned_cols=203 Identities=12% Similarity=0.031 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAY 112 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 112 (546)
.+..++.+|..++..|++++|+..|+++++.+|+ ..++..+|.++...|++++|++.++++++++|++..++..+|.++
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 99 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSH 99 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHH
Confidence 4567899999999999999999999999999995 899999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHHhhccCCCCcchhccc--------------cc-chhhhhhhhhhhhchHHHHHHHHHHHHhhhhcC
Q psy11688 113 MSLGKFKLALRDYEAVHKARPNDKDAKAKF--------------TE-CNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQ 177 (546)
Q Consensus 113 ~~~g~~~eA~~~~~kal~l~P~~~~~~~~l--------------~~-~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~ 177 (546)
...|++++|++.|+++++.+|++...+..+ +. ++...+ ....++....+++...
T Consensus 100 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~A~~~~~~~~~~~ 168 (327)
T 3cv0_A 100 TNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPN-----------EYRECRTLLHAALEMN 168 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHH-----------HHHHHHHHHHHHHHHS
T ss_pred HHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcc-----------cHHHHHHHHHHHHhhC
Confidence 999999999999999999999988877666 33 333333 3334444455555555
Q ss_pred CcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCC
Q psy11688 178 DSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249 (546)
Q Consensus 178 p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~ 249 (546)
|....+....+..+...|+...+...+.++++..+ .....+..+|...-+-.+..+++..+.......|+
T Consensus 169 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 238 (327)
T 3cv0_A 169 PNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRP--DDAQLWNKLGATLANGNRPQEALDAYNRALDINPG 238 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 55444333334445566777777777777776532 22233555666555555556666665554444443
No 92
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.42 E-value=7.9e-13 Score=143.82 Aligned_cols=146 Identities=10% Similarity=0.025 Sum_probs=124.2
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHH
Q psy11688 25 KEVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTK 103 (546)
Q Consensus 25 ~~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~ 103 (546)
.++.+.+|+.+.++..+|..+.+.|++++|+..|++|++++|+ ..++.++|.++..+|++++|++.++++++++|+++.
T Consensus 13 ~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 92 (568)
T 2vsy_A 13 RAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPG 92 (568)
T ss_dssp --------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHH
Confidence 3445667888899999999999999999999999999999995 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhh---hhhhhhhhchHHHHHHHHHHHHhhhhcCCcc
Q psy11688 104 AYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIV---KRMQIKGKLHRKYAYRILMDIKALFMTQDSL 180 (546)
Q Consensus 104 a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l---~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~ 180 (546)
+++++|.+|..+|++++|++.|+++++++|++..++..++.++... ++. + ++.....+.+...|..
T Consensus 93 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~--------~---~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 93 IALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRAL--------D---VLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTH--------H---HHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccH--------H---HHHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999999999988777 544 2 3444455556666654
Q ss_pred c
Q psy11688 181 V 181 (546)
Q Consensus 181 ~ 181 (546)
.
T Consensus 162 ~ 162 (568)
T 2vsy_A 162 V 162 (568)
T ss_dssp S
T ss_pred c
Confidence 3
No 93
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.42 E-value=5.1e-13 Score=141.74 Aligned_cols=108 Identities=30% Similarity=0.479 Sum_probs=103.0
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
..+.+++++.+|..+++.|+|++|+..|+++++.+|++.++.++|.++.++|++++|++.++++++++|++..+++.+|.
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 81 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRAS 81 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcChHHHHHHHHHhhccCCCCcch
Q psy11688 111 AYMSLGKFKLALRDYEAVHKARPNDKDA 138 (546)
Q Consensus 111 ~~~~~g~~~eA~~~~~kal~l~P~~~~~ 138 (546)
++..+|++++|++.|+++++.+|.+...
T Consensus 82 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 109 (514)
T 2gw1_A 82 ANEGLGKFADAMFDLSVLSLNGDFNDAS 109 (514)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSSSCCGGG
T ss_pred HHHHHhhHHHHHHHHHHHHhcCCCccch
Confidence 9999999999999999999999865443
No 94
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.42 E-value=7.4e-13 Score=128.67 Aligned_cols=148 Identities=18% Similarity=0.123 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----HHHHHHHHHHHHH--------ccCHHHHHHHHHHHHHhCCCc
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT----AIYYANRSFAYLK--------TEAIGYALNDASKAIELDQTY 101 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~----~~a~~nla~~~~~--------~g~~~~Al~~~~~al~l~p~~ 101 (546)
.+.+++.+|.++++.|+|++|+..|+++++.+|+ ..+++++|.++.. +|++++|+..++++++.+|++
T Consensus 51 ~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 51 AADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 3789999999999999999999999999999883 7899999999999 999999999999999999998
Q ss_pred HHHH-----------------HHHHHHHHHhcChHHHHHHHHHhhccCCCC---cchhcccccchhhhhhhhhhhhchHH
Q psy11688 102 TKAY-----------------YRRAAAYMSLGKFKLALRDYEAVHKARPND---KDAKAKFTECNKIVKRMQIKGKLHRK 161 (546)
Q Consensus 102 ~~a~-----------------~~lg~~~~~~g~~~eA~~~~~kal~l~P~~---~~~~~~l~~~~~~l~~~~~~~~l~~~ 161 (546)
..++ +.+|.+|..+|++++|+..|+++++..|++ ..++..++.++..++...... ...+
T Consensus 131 ~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~-~~~~ 209 (261)
T 3qky_A 131 ELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRA-RQPE 209 (261)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGG-GHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhh-cccc
Confidence 7666 889999999999999999999999999984 457888888887664332110 1224
Q ss_pred HHHHHHHHHHhhhhcCCcccc
Q psy11688 162 YAYRILMDIKALFMTQDSLVH 182 (546)
Q Consensus 162 ~~~~il~~a~eiL~~~p~~~~ 182 (546)
...+++....+++...|+...
T Consensus 210 ~~~~A~~~~~~~~~~~p~~~~ 230 (261)
T 3qky_A 210 RYRRAVELYERLLQIFPDSPL 230 (261)
T ss_dssp HHHHHHHHHHHHHHHCTTCTH
T ss_pred hHHHHHHHHHHHHHHCCCChH
Confidence 445566666667777776443
No 95
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.42 E-value=6.6e-13 Score=127.17 Aligned_cols=167 Identities=13% Similarity=0.166 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--------HHHHHHHHHHHHHccCHHHHHHHHHHHHH---------
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT--------AIYYANRSFAYLKTEAIGYALNDASKAIE--------- 96 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~--------~~a~~nla~~~~~~g~~~~Al~~~~~al~--------- 96 (546)
.+..+..+|.++...|++++|+..++++++++|+ ..++.++|.++..+|++++|+..++++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 116 (258)
T 3uq3_A 37 DITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILT 116 (258)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred cHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHH
Confidence 3568899999999999999999999999998883 68999999999999999999999999999
Q ss_pred -----------------hCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhch
Q psy11688 97 -----------------LDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLH 159 (546)
Q Consensus 97 -----------------l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~ 159 (546)
.+|+++.++..+|.++...|++++|++.|+++++.+|++..++..++.++...++++
T Consensus 117 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~------ 190 (258)
T 3uq3_A 117 KLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFP------ 190 (258)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH------
T ss_pred HHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHH------
Confidence 777888999999999999999999999999999999999999999999887777663
Q ss_pred HHHHHHHHHHHHhhhhcCCcccccccccccccccccccchhHhhHHHHHHHh
Q psy11688 160 RKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 160 ~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~ 211 (546)
.+ +....+++...|.........+..+...|+...+...+.++++..
T Consensus 191 --~A---~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 191 --EA---IADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp --HH---HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred --HH---HHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 33 333444454556544444344445666777777777777777653
No 96
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.41 E-value=1e-12 Score=119.57 Aligned_cols=112 Identities=14% Similarity=0.164 Sum_probs=104.7
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHH-HHHccCH--HHHHHHHHHHHHhCCCcHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFA-YLKTEAI--GYALNDASKAIELDQTYTKA 104 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~-~~~~g~~--~~Al~~~~~al~l~p~~~~a 104 (546)
..+|+.+..+..+|.+++..|++++|+..|+++++++|+ ..++.++|.+ +...|++ ++|+..++++++++|+++.+
T Consensus 38 ~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 117 (177)
T 2e2e_A 38 RANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITA 117 (177)
T ss_dssp HHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHH
T ss_pred HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHH
Confidence 456677889999999999999999999999999999994 8999999999 8899999 99999999999999999999
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhc
Q psy11688 105 YYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKA 140 (546)
Q Consensus 105 ~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~ 140 (546)
++.+|.++..+|++++|+..|+++++++|++.....
T Consensus 118 ~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 153 (177)
T 2e2e_A 118 LMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQ 153 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHH
Confidence 999999999999999999999999999999866543
No 97
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.41 E-value=1.4e-13 Score=116.91 Aligned_cols=94 Identities=12% Similarity=0.072 Sum_probs=84.7
Q ss_pred HccCHHHHHHHHHHHHHh---CCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHH
Q psy11688 47 KNQAYNKAIELYSAAIEV---NPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLAL 122 (546)
Q Consensus 47 ~~g~~~~Ai~~~~~al~~---~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~ 122 (546)
..|++++|+..|++++++ +|+ ..++.++|.+|..+|++++|+..++++++++|+++.+++.+|.++..+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 574 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcchhc
Q psy11688 123 RDYEAVHKARPNDKDAKA 140 (546)
Q Consensus 123 ~~~~kal~l~P~~~~~~~ 140 (546)
+.|+++++..|+++.+..
T Consensus 82 ~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHhCCCcHHHHH
Confidence 999999999999887643
No 98
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.41 E-value=3.9e-12 Score=108.30 Aligned_cols=117 Identities=26% Similarity=0.365 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q psy11688 36 EKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMS 114 (546)
Q Consensus 36 ~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 114 (546)
++++..|..+...|++++|+..++++++.+|+ ..++..+|.++...|++++|+..++++++.+|+++.+++.+|.++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 56788999999999999999999999999995 88999999999999999999999999999999999999999999999
Q ss_pred hcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhh
Q psy11688 115 LGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRM 152 (546)
Q Consensus 115 ~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~ 152 (546)
.|++++|++.++++++..|++..++..++.++...++.
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 119 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDY 119 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccH
Confidence 99999999999999999999998888888887766655
No 99
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.40 E-value=7.4e-13 Score=133.07 Aligned_cols=208 Identities=12% Similarity=0.050 Sum_probs=158.9
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---CcHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQ---TYTKA 104 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p---~~~~a 104 (546)
..+|+.+..+..+|.+++..|++++|+..|+++++.+|+ ..++..+|.++...|++++|+..++++++++| ++..+
T Consensus 31 ~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 110 (359)
T 3ieg_A 31 DGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEA 110 (359)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred hhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHH
Confidence 345566789999999999999999999999999999995 89999999999999999999999999999999 99999
Q ss_pred HHHH------------HHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHh
Q psy11688 105 YYRR------------AAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKA 172 (546)
Q Consensus 105 ~~~l------------g~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~e 172 (546)
+..+ |.++...|++++|++.|+++++.+|++..++..++.++...++++ .++....+
T Consensus 111 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~A~~~~~~ 179 (359)
T 3ieg_A 111 ESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPR-----------KAISDLKA 179 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-----------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHH-----------HHHHHHHH
Confidence 8887 799999999999999999999999999999999999988777663 33344445
Q ss_pred hhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCe------------eeeccccccCCChHHHHHHH
Q psy11688 173 LFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPY------------LFNGDFVDRGSFSVECIFTL 240 (546)
Q Consensus 173 iL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~------------~~lGD~vdrG~~~~e~l~~l 240 (546)
++...|.........+..+...|+...+...+.++++..+.. ...+ +.+|...-+..+..+++..+
T Consensus 180 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~ 257 (359)
T 3ieg_A 180 ASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDH--KRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKY 257 (359)
T ss_dssp HHTTCSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc--hHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 555566655544444445566777777777777777764322 1111 12244344444555666665
Q ss_pred hhhhhcCCC
Q psy11688 241 FGFKLLYPN 249 (546)
Q Consensus 241 ~~l~~~~p~ 249 (546)
.......|+
T Consensus 258 ~~~~~~~~~ 266 (359)
T 3ieg_A 258 ESVMKTEPS 266 (359)
T ss_dssp HHHHHHCCS
T ss_pred HHHHhcCCC
Confidence 555544444
No 100
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.40 E-value=6.9e-13 Score=128.76 Aligned_cols=172 Identities=16% Similarity=0.106 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYM 113 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 113 (546)
+.++..+|.++...|++++|+..|+++++.+|+ ..++.++|.++..+|++++|+..++++++++|+++.+++.+|....
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 567899999999999999999999999999995 8999999999999999999999999999999999999999994444
Q ss_pred HhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcc-----cccccccc
Q psy11688 114 SLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSL-----VHITVEDE 188 (546)
Q Consensus 114 ~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~-----~~i~~~~~ 188 (546)
..+++++|++.|+++++++|++..++..++.++...++.. ..+.+...++++.+.....|.. ..+....+
T Consensus 154 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~-----~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 228 (272)
T 3u4t_A 154 YNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDT-----KQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIA 228 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTC-----SSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcch-----hhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 5569999999999999999999999988888887765411 0112334444555554444431 12222223
Q ss_pred cccccccccchhHhhHHHHHHHh
Q psy11688 189 AKFTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 189 ~~~~viGDihg~~~~l~~il~~~ 211 (546)
..+...|+...+...+.++++..
T Consensus 229 ~~~~~~~~~~~A~~~~~~al~~~ 251 (272)
T 3u4t_A 229 YYYTINRDKVKADAAWKNILALD 251 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHHHHhcC
Confidence 33455677777777777777764
No 101
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.40 E-value=5.9e-13 Score=132.01 Aligned_cols=167 Identities=9% Similarity=-0.037 Sum_probs=138.1
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
|..++.+..+|..+.+.|++++|+..|+++++.+|+ ..+++++|.++..+|++++|++.++++++.+|+....+...+.
T Consensus 114 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~ 193 (287)
T 3qou_A 114 PREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQI 193 (287)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHH
Confidence 456778899999999999999999999999999995 9999999999999999999999999999999988888888899
Q ss_pred HHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcc--cccccccc
Q psy11688 111 AYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSL--VHITVEDE 188 (546)
Q Consensus 111 ~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~--~~i~~~~~ 188 (546)
.+...++.++|++.|+++++++|++..++..++.++...++.+ +++....+++...|+. .......+
T Consensus 194 ~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~-----------~A~~~l~~~l~~~p~~~~~~a~~~l~ 262 (287)
T 3qou_A 194 ELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNE-----------EALELLFGHLRXDLTAADGQTRXTFQ 262 (287)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-----------HHHHHHHHHHHHCTTGGGGHHHHHHH
T ss_pred HHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHH-----------HHHHHHHHHHhcccccccchHHHHHH
Confidence 9999999999999999999999999999999999998877763 4555666677777765 32322223
Q ss_pred cccccccccchhHhhHHHHHH
Q psy11688 189 AKFTVCGDIHGQFYDLMNIFE 209 (546)
Q Consensus 189 ~~~~viGDihg~~~~l~~il~ 209 (546)
..+...|+.+.+...+.+.+.
T Consensus 263 ~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 263 EILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCcHHHHHHHHHH
Confidence 334455666665555555554
No 102
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.40 E-value=9e-13 Score=140.95 Aligned_cols=108 Identities=31% Similarity=0.473 Sum_probs=95.4
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR 107 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~ 107 (546)
++.++.+++++.+|..+++.|+|++|+..|+++++.+|+ +.++.++|.+|..+|++++|++.++++++++|+++.+++.
T Consensus 19 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 98 (537)
T 3fp2_A 19 SQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLR 98 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHH
Confidence 455668899999999999999999999999999999995 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcChHHHHHHHHHhhccCCCCcc
Q psy11688 108 RAAAYMSLGKFKLALRDYEAVHKARPNDKD 137 (546)
Q Consensus 108 lg~~~~~~g~~~eA~~~~~kal~l~P~~~~ 137 (546)
+|.++..+|++++|+..|+ ++.++|+...
T Consensus 99 la~~~~~~g~~~~A~~~~~-~~~~~~~~~~ 127 (537)
T 3fp2_A 99 RASANESLGNFTDAMFDLS-VLSLNGDFDG 127 (537)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHC-------
T ss_pred HHHHHHHcCCHHHHHHHHH-HHhcCCCCCh
Confidence 9999999999999999995 8888887554
No 103
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.39 E-value=1.2e-12 Score=142.10 Aligned_cols=209 Identities=13% Similarity=-0.003 Sum_probs=155.4
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRA 109 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg 109 (546)
.|+.+..+..+|..+.+.|++++|+..|+++++.+|+ ..+|..+|.+|.+.|++++|++.++++++.+|++..+|..+|
T Consensus 369 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~ 448 (597)
T 2xpi_A 369 HPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLG 448 (597)
T ss_dssp CTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 3455778888999999999999999999999999985 889999999999999999999999999999999999999999
Q ss_pred HHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhc---CCcc-ccccc
Q psy11688 110 AAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMT---QDSL-VHITV 185 (546)
Q Consensus 110 ~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~---~p~~-~~i~~ 185 (546)
.+|...|++++|++.|+++++.+|+++.++..++.++...++. +.+...++++.+.... .|.. ..+..
T Consensus 449 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~--------~~A~~~~~~~~~~~~~~~~~p~~~~~~~~ 520 (597)
T 2xpi_A 449 MQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDM--------QTAINHFQNALLLVKKTQSNEKPWAATWA 520 (597)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHHHSCCCSGGGHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCH--------HHHHHHHHHHHHhhhccccchhhHHHHHH
Confidence 9999999999999999999999999998888888888777666 3444555555444322 3331 22222
Q ss_pred ccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCC
Q psy11688 186 EDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249 (546)
Q Consensus 186 ~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~ 249 (546)
..+..+...|+...+...+.++++.. |.....+..+|...-+-.+..+++..+.......|+
T Consensus 521 ~l~~~~~~~g~~~~A~~~~~~~~~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~ 582 (597)
T 2xpi_A 521 NLGHAYRKLKMYDAAIDALNQGLLLS--TNDANVHTAIALVYLHKKIPGLAITHLHESLAISPN 582 (597)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHS--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 23334555666666666677776653 333345666777666666666777666665555554
No 104
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.38 E-value=6.4e-13 Score=118.20 Aligned_cols=98 Identities=12% Similarity=0.075 Sum_probs=93.1
Q ss_pred HHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCC
Q psy11688 55 IELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARP 133 (546)
Q Consensus 55 i~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P 133 (546)
-..|+++++++|+ ..+++++|.++...|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+++|+++++++|
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 3468899999995 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhcccccchhhhhhh
Q psy11688 134 NDKDAKAKFTECNKIVKRM 152 (546)
Q Consensus 134 ~~~~~~~~l~~~~~~l~~~ 152 (546)
+++.++..++.++...++.
T Consensus 87 ~~~~~~~~lg~~~~~~g~~ 105 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGEL 105 (148)
T ss_dssp TCTHHHHHHHHHHHHTTCH
T ss_pred CCchHHHHHHHHHHHcCCH
Confidence 9999999999999888877
No 105
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.37 E-value=1.9e-13 Score=152.24 Aligned_cols=162 Identities=13% Similarity=0.053 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHH--------HhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAI--------EVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTK 103 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al--------~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~ 103 (546)
+++.+++..| +..|++++|++.|++++ +.+|+ ..+++++|.++..+|++++|++.++++++++|+++.
T Consensus 392 ~~~~a~~~~a---~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~ 468 (681)
T 2pzi_A 392 TDVAASVLQA---TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWR 468 (681)
T ss_dssp TSTTHHHHHH---TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHH
T ss_pred CCcchHHhhc---ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHH
Confidence 3334455444 78999999999999999 88995 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCccccc
Q psy11688 104 AYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHI 183 (546)
Q Consensus 104 a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i 183 (546)
+|+.+|.++..+|++++|++.|+++++++|++..++..++.++...++++ + +..+.+++...|.....
T Consensus 469 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~-----------~-~~~~~~al~~~P~~~~a 536 (681)
T 2pzi_A 469 LVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTD-----------E-HKFYQTVWSTNDGVISA 536 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCC-----------T-TCHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChH-----------H-HHHHHHHHHhCCchHHH
Confidence 99999999999999999999999999999999999999999998887764 2 33344555566665554
Q ss_pred ccccccccccccccchhHhhHHHHHH
Q psy11688 184 TVEDEAKFTVCGDIHGQFYDLMNIFE 209 (546)
Q Consensus 184 ~~~~~~~~~viGDihg~~~~l~~il~ 209 (546)
....+..+...|+...+...+.++++
T Consensus 537 ~~~lg~~~~~~g~~~~A~~~~~~al~ 562 (681)
T 2pzi_A 537 AFGLARARSAEGDRVGAVRTLDEVPP 562 (681)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHhhcc
Confidence 44434444455555444444444433
No 106
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.37 E-value=9.5e-13 Score=137.60 Aligned_cols=220 Identities=10% Similarity=0.023 Sum_probs=145.2
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcH---HHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYT---KAY 105 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~---~a~ 105 (546)
.+|+.+..+..+|.+++..|++++|+..|+++++.+|+ ..++..+|.+|..+|++++|++.++++++++|++. .++
T Consensus 55 ~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~ 134 (450)
T 2y4t_A 55 GDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQ 134 (450)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred hCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHH
Confidence 34556778888999999999999999999999999995 88899999999999999999999999999999888 665
Q ss_pred HHH------------HHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhh----------------
Q psy11688 106 YRR------------AAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGK---------------- 157 (546)
Q Consensus 106 ~~l------------g~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~---------------- 157 (546)
..+ |.++...|++++|++.|+++++.+|++..++..++.++...++.+....
T Consensus 135 ~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 214 (450)
T 2y4t_A 135 SQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAF 214 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 554 6668888999999999999998888888888888887776665543110
Q ss_pred -------chHHHHHHHHHHHHhhhhcCCcccccccc------------cccccccccccchhHhhHHHHHHHhCCCCC--
Q psy11688 158 -------LHRKYAYRILMDIKALFMTQDSLVHITVE------------DEAKFTVCGDIHGQFYDLMNIFELNGLPSP-- 216 (546)
Q Consensus 158 -------l~~~~~~~il~~a~eiL~~~p~~~~i~~~------------~~~~~~viGDihg~~~~l~~il~~~~~~~~-- 216 (546)
...+....++....+++...|........ .+..+...|+...+...+.++++..+..+.
T Consensus 215 ~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 294 (450)
T 2y4t_A 215 YKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYT 294 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHH
Confidence 00011222333333344444443222110 022344456666666666666664322100
Q ss_pred CCCeeeeccccccCCChHHHHHHHhhhhhcCCC
Q psy11688 217 DNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249 (546)
Q Consensus 217 ~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~ 249 (546)
...+..+|+...+-.+..+++..+.......|+
T Consensus 295 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~ 327 (450)
T 2y4t_A 295 VRSKERICHCFSKDEKPVEAIRVCSEVLQMEPD 327 (450)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc
Confidence 113455666666666666666666554444443
No 107
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.37 E-value=1.4e-12 Score=139.52 Aligned_cols=169 Identities=17% Similarity=0.162 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAY 112 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 112 (546)
..+.++..+|..+...|++++|+..|+++++.+|+..++..+|.++...|++++|+..++++++++|+++.++..+|.++
T Consensus 241 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 320 (537)
T 3fp2_A 241 NAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMY 320 (537)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 34667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccccccccc
Q psy11688 113 MSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFT 192 (546)
Q Consensus 113 ~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~~ 192 (546)
...|++++|++.|+++++++|++..++..++.++...+++ ..+...++ +++...|....+....+..+.
T Consensus 321 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~--------~~A~~~~~---~~~~~~~~~~~~~~~l~~~~~ 389 (537)
T 3fp2_A 321 FILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKF--------TESEAFFN---ETKLKFPTLPEVPTFFAEILT 389 (537)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCH--------HHHHHHHH---HHHHHCTTCTHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH--------HHHHHHHH---HHHHhCCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999998877766 33334433 444445554444434445566
Q ss_pred cccccchhHhhHHHHHHHhC
Q psy11688 193 VCGDIHGQFYDLMNIFELNG 212 (546)
Q Consensus 193 viGDihg~~~~l~~il~~~~ 212 (546)
..|+...+...+.++++..+
T Consensus 390 ~~g~~~~A~~~~~~a~~~~~ 409 (537)
T 3fp2_A 390 DRGDFDTAIKQYDIAKRLEE 409 (537)
T ss_dssp HTTCHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHcCC
Confidence 77888888888888887653
No 108
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.37 E-value=4.8e-13 Score=122.22 Aligned_cols=167 Identities=10% Similarity=-0.027 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
|...+.+..+|..+.+.|++++|+..|+++++.+|+ ..+++++|.++...|++++|+..++++++++| ++..+..++.
T Consensus 3 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~ 81 (176)
T 2r5s_A 3 ASPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAK 81 (176)
T ss_dssp ---CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHH
Confidence 334456788999999999999999999999999995 89999999999999999999999999999999 8877666665
Q ss_pred HH-HHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccc--ccccc
Q psy11688 111 AY-MSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVH--ITVED 187 (546)
Q Consensus 111 ~~-~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~--i~~~~ 187 (546)
+. ...++..+|++.|+++++++|++..++..++.++...++.+ +......+++...|.... .....
T Consensus 82 ~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~-----------~A~~~~~~~l~~~p~~~~~~a~~~l 150 (176)
T 2r5s_A 82 LELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDE-----------EALELLWNILKVNLGAQDGEVKKTF 150 (176)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH-----------HHHHHHHHHHTTCTTTTTTHHHHHH
T ss_pred HHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHH-----------HHHHHHHHHHHhCcccChHHHHHHH
Confidence 53 33445567899999999999999999999999988777663 344455566666665422 22222
Q ss_pred ccccccccccchhHhhHHHHHHH
Q psy11688 188 EAKFTVCGDIHGQFYDLMNIFEL 210 (546)
Q Consensus 188 ~~~~~viGDihg~~~~l~~il~~ 210 (546)
+..+...|+...+...+.+.+..
T Consensus 151 ~~~~~~~g~~~~A~~~y~~al~~ 173 (176)
T 2r5s_A 151 MDILSALGQGNAIASKYRRQLYS 173 (176)
T ss_dssp HHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCcHHHHHHHHHHH
Confidence 33345566666666666666543
No 109
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.37 E-value=4.8e-13 Score=141.01 Aligned_cols=210 Identities=11% Similarity=0.016 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---------CCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC----
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEV---------NPT-AIYYANRSFAYLKTEAIGYALNDASKAIELD---- 98 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~---------~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~---- 98 (546)
..+..+..+|.++..+|++++|++.|++|+++ +|+ ..+|.|+|.+|..+|++++|+.++++++++.
T Consensus 49 ~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~ 128 (472)
T 4g1t_A 49 FKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFS 128 (472)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcc
Confidence 34567788999999999999999999999987 443 7889999999999999999999999999873
Q ss_pred ----CCcHHHHHHHHHHHHHhc--ChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHh
Q psy11688 99 ----QTYTKAYYRRAAAYMSLG--KFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKA 172 (546)
Q Consensus 99 ----p~~~~a~~~lg~~~~~~g--~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~e 172 (546)
++.+.++..+|.++...+ +|++|+++|++|++++|+++.++..++.+....+.... ...+++...+
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~--------~~~al~~~~~ 200 (472)
T 4g1t_A 129 SPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPP--------SQNAIDPLRQ 200 (472)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCC--------CCCTHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchH--------HHHHHHHHHH
Confidence 456889999998887764 69999999999999999999998888877655443321 1122333444
Q ss_pred hhhcCCcccccccccccccccccccchhHhhHHHHHHHhC--CCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCe
Q psy11688 173 LFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNG--LPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNH 250 (546)
Q Consensus 173 iL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~--~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~ 250 (546)
++...|....+....+..+..+++..|+++...+.++..- .|.....+..+|....+-....+++..+.......|+.
T Consensus 201 al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 280 (472)
T 4g1t_A 201 AIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNN 280 (472)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCh
Confidence 5555565444332222223344555555555555544321 22223335556766666566666666666555556653
No 110
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.37 E-value=4.1e-12 Score=118.93 Aligned_cols=122 Identities=16% Similarity=0.106 Sum_probs=113.6
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHc-cCHHHHHHHHHHHHH--hCCCcHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKT-EAIGYALNDASKAIE--LDQTYTKAYY 106 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~-g~~~~Al~~~~~al~--l~p~~~~a~~ 106 (546)
.|+.+..+...|..+...|++++|+..|+++++.+|+ ..++.++|.++... |++++|+..++++++ .+|.+..+++
T Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 117 (225)
T 2vq2_A 38 DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANL 117 (225)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHH
T ss_pred CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHH
Confidence 4455778999999999999999999999999999995 89999999999999 999999999999999 7788899999
Q ss_pred HHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhh
Q psy11688 107 RRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRM 152 (546)
Q Consensus 107 ~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~ 152 (546)
.+|.++...|++++|++.|+++++.+|++..++..++.++...++.
T Consensus 118 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 163 (225)
T 2vq2_A 118 NKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQL 163 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCH
Confidence 9999999999999999999999999999999999999888777666
No 111
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.36 E-value=3.8e-12 Score=125.03 Aligned_cols=114 Identities=18% Similarity=0.109 Sum_probs=85.9
Q ss_pred ccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhhc-
Q psy11688 190 KFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYG- 268 (546)
Q Consensus 190 ~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~- 268 (546)
++.+++|+||++..|.++++..... ..+.++++||++++|+.+.++++++.+++ .+++++||||.+.+....+
T Consensus 13 ~i~~iSDiHg~~~~l~~vl~~~~~~-~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~~~~ 86 (270)
T 3qfm_A 13 KIALLSDIHGNTTALEAVLADARQL-GVDEYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWHGVRKE 86 (270)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHT-TCCEEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHHHHTTC
T ss_pred EEEEEecCCCCHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHHhhccc
Confidence 5899999999999999999877543 35679999999999999999999998773 5899999999988765432
Q ss_pred --chhhhhh------hc-hHHHHHHHHHhhccccceeee---cceEEEEeCCc
Q psy11688 269 --FEGEVKS------KY-TDLMAQFFTEVYNWLPLCHCI---NNKVLVMHGGL 309 (546)
Q Consensus 269 --~~~e~~~------~~-~~~~~~~~~~~~~~lP~~~~~---~~~~~~vHgGi 309 (546)
+...... .| ...+.....+++..||....+ +.+++++||.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p 139 (270)
T 3qfm_A 87 LDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLP 139 (270)
T ss_dssp SCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBT
T ss_pred cCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCC
Confidence 2221111 11 122334567899999998755 34899999765
No 112
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.36 E-value=4.3e-12 Score=128.69 Aligned_cols=198 Identities=11% Similarity=0.011 Sum_probs=123.7
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHH--
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYY-- 106 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~-- 106 (546)
.+|+.+..+..+|.++...|++++|+..|+++++++|+ ..++.++|.++..+|++++|+..++++++++|++..++.
T Consensus 93 ~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~ 172 (368)
T 1fch_A 93 QDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPA 172 (368)
T ss_dssp SCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC--
T ss_pred hCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHH
Confidence 35666788999999999999999999999999999995 899999999999999999999999988888877655443
Q ss_pred --------------HHHHHHHHhcChHHHHHHHHHhhccCCC--CcchhcccccchhhhhhhhhhhhchHHHHHHHHHHH
Q psy11688 107 --------------RRAAAYMSLGKFKLALRDYEAVHKARPN--DKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDI 170 (546)
Q Consensus 107 --------------~lg~~~~~~g~~~eA~~~~~kal~l~P~--~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a 170 (546)
.+|.++ ..|++++|+..|+++++++|+ +..++..++.++...++++ .+... .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~--------~A~~~---~ 240 (368)
T 1fch_A 173 EEGAGGAGLGPSKRILGSLL-SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYD--------KAVDC---F 240 (368)
T ss_dssp -------------CTTHHHH-HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHH--------HHHHH---H
T ss_pred HHHhhhhcccHHHHHHHHHh-hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHH--------HHHHH---H
Confidence 344444 666666666666666666666 5555555666655554442 12222 2
Q ss_pred HhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHh
Q psy11688 171 KALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLF 241 (546)
Q Consensus 171 ~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~ 241 (546)
.+++...|.........+..+...|+...+...+.++++..+ .....+..+|...-+-.+..+++..+.
T Consensus 241 ~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~--~~~~~~~~l~~~~~~~g~~~~A~~~~~ 309 (368)
T 1fch_A 241 TAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQP--GYIRSRYNLGISCINLGAHREAVEHFL 309 (368)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 222223333333222333334455555555555555555421 112234445544333333344444333
No 113
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.35 E-value=1.5e-12 Score=108.18 Aligned_cols=95 Identities=23% Similarity=0.392 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc------HHHHH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY------TKAYY 106 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~------~~a~~ 106 (546)
.++++..+|..++..|+|++|+..|+++++++|+ +.+++++|.++..+|++++|++.++++++++|++ ..+++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 4678999999999999999999999999999995 8999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhcChHHHHHHHHHh
Q psy11688 107 RRAAAYMSLGKFKLALRDYEAV 128 (546)
Q Consensus 107 ~lg~~~~~~g~~~eA~~~~~ka 128 (546)
.+|.++..+|++++|+..+++.
T Consensus 83 ~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 83 RLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHhHhhhHhHHHHh
Confidence 9999999999999998877654
No 114
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.34 E-value=2e-12 Score=137.14 Aligned_cols=208 Identities=15% Similarity=0.089 Sum_probs=161.4
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
+|..+..+..+|..+...|++++|+..|+++++.+|+..++..+|.++...|++++|+..++++++++|+++.++..+|.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 312 (514)
T 2gw1_A 233 KEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELFPRVNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQ 312 (514)
T ss_dssp HHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCccHHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHH
Confidence 48889999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred HHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccccccc
Q psy11688 111 AYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAK 190 (546)
Q Consensus 111 ~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~ 190 (546)
++...|++++|+..|+++++++|++..++..++.++...++.+ .+...+.. ++...|....+....+..
T Consensus 313 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~A~~~~~~---~~~~~~~~~~~~~~la~~ 381 (514)
T 2gw1_A 313 MNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFD--------DCETLFSE---AKRKFPEAPEVPNFFAEI 381 (514)
T ss_dssp HHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHH--------HHHHHHHH---HHHHSTTCSHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHH--------HHHHHHHH---HHHHcccCHHHHHHHHHH
Confidence 9999999999999999999999999999999998887777663 33333333 344444443333333445
Q ss_pred cccccccchhHhhHHHHHHHhCCCCCC----CCeeeecccccc---CCChHHHHHHHhhhhhcCCC
Q psy11688 191 FTVCGDIHGQFYDLMNIFELNGLPSPD----NPYLFNGDFVDR---GSFSVECIFTLFGFKLLYPN 249 (546)
Q Consensus 191 ~~viGDihg~~~~l~~il~~~~~~~~~----~~~~~lGD~vdr---G~~~~e~l~~l~~l~~~~p~ 249 (546)
+...|+...+...+.++++..+..+.. ..+..+|...-+ -.+..+++..+.......|+
T Consensus 382 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~ 447 (514)
T 2gw1_A 382 LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPR 447 (514)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTT
T ss_pred HHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcc
Confidence 566777777777777777765433221 135556665544 44555666655555444443
No 115
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.33 E-value=1.2e-11 Score=115.62 Aligned_cols=101 Identities=16% Similarity=0.158 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcH-----------
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYT----------- 102 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~----------- 102 (546)
+..++.+|.+++..|++++|+..|+++++.+|+ ..+++++|.++..+|++++|++.+++++++.|++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 116 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQF 116 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcccc
Confidence 568999999999999999999999999999995 89999999999999999999999999999888766
Q ss_pred -----HHHHHHHHHHHHhcChHHHHHHHHHhhccCCCC
Q psy11688 103 -----KAYYRRAAAYMSLGKFKLALRDYEAVHKARPND 135 (546)
Q Consensus 103 -----~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~ 135 (546)
.+++++|.++..+|++++|++.|+++++++|++
T Consensus 117 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 117 KLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp EEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred CccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 999999999999999999999999999999986
No 116
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.33 E-value=9.9e-12 Score=118.22 Aligned_cols=138 Identities=15% Similarity=0.130 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----HHHHHHHHHHHHH------------------ccCHHHHHHHH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT----AIYYANRSFAYLK------------------TEAIGYALNDA 91 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~----~~a~~nla~~~~~------------------~g~~~~Al~~~ 91 (546)
..++++.+|.++++.|+|++|+..|+++++.+|+ ..+++.+|.++.. .|++++|+..+
T Consensus 40 ~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 40 SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 4578999999999999999999999999999995 3689999999987 57999999999
Q ss_pred HHHHHhCCCcHHHH-----------------HHHHHHHHHhcChHHHHHHHHHhhccCCCCc---chhcccccchhhhhh
Q psy11688 92 SKAIELDQTYTKAY-----------------YRRAAAYMSLGKFKLALRDYEAVHKARPNDK---DAKAKFTECNKIVKR 151 (546)
Q Consensus 92 ~~al~l~p~~~~a~-----------------~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~---~~~~~l~~~~~~l~~ 151 (546)
+++++.+|+++.++ +.+|.+|...|++++|+..|+++++..|+++ .++..++.++..+++
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~ 199 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQM 199 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCC
Confidence 99999999987655 6789999999999999999999999999986 578888888887776
Q ss_pred hhhhhhchHHHHHHHHHHHHhhhhcCCcccc
Q psy11688 152 MQIKGKLHRKYAYRILMDIKALFMTQDSLVH 182 (546)
Q Consensus 152 ~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~ 182 (546)
.+ .++.....+....|..++
T Consensus 200 ~~-----------~A~~~~~~l~~~~~~~~~ 219 (225)
T 2yhc_A 200 NA-----------QAEKVAKIIAANSSNTLE 219 (225)
T ss_dssp HH-----------HHHHHHHHHHHCCSCCCC
T ss_pred cH-----------HHHHHHHHHHhhCCCchh
Confidence 63 233344455555665444
No 117
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.31 E-value=1.1e-12 Score=130.32 Aligned_cols=207 Identities=11% Similarity=-0.009 Sum_probs=147.7
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.+|+.+..+..+|.++...|++++|+..|+++++.+|+ ..++..+|.++...|++++|++.++++++.+|++..++..+
T Consensus 50 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 129 (327)
T 3cv0_A 50 AAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVN 129 (327)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC----
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 45566788899999999999999999999999999995 89999999999999999999999999999999988888777
Q ss_pred --------------HH-HHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhh
Q psy11688 109 --------------AA-AYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKAL 173 (546)
Q Consensus 109 --------------g~-~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~ei 173 (546)
|. ++...|++++|++.++++++.+|++..++..++.++...++.+ .+... ..++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~--------~A~~~---~~~~ 198 (327)
T 3cv0_A 130 LQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYD--------SAAAN---LRRA 198 (327)
T ss_dssp ----------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH--------HHHHH---HHHH
T ss_pred hHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHH--------HHHHH---HHHH
Confidence 66 7888999999999999999999999888888888887766652 23333 3333
Q ss_pred hhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCC
Q psy11688 174 FMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249 (546)
Q Consensus 174 L~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~ 249 (546)
+...|.........+..+...|+...+...+.++++..+ .....+..+|...-+-.+..+++..+.......|+
T Consensus 199 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 199 VELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINP--GYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 444454333333333445556777777777777776532 22233555665554444555666555544444443
No 118
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.31 E-value=3.1e-12 Score=112.45 Aligned_cols=97 Identities=14% Similarity=0.078 Sum_probs=89.6
Q ss_pred HHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCC
Q psy11688 56 ELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 56 ~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
..|.++++++|+ ..+++++|.++...|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|+++++++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 467888889995 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccchhcccccchhhhhhh
Q psy11688 135 DKDAKAKFTECNKIVKRM 152 (546)
Q Consensus 135 ~~~~~~~l~~~~~~l~~~ 152 (546)
++.++..++.++...++.
T Consensus 85 ~~~~~~~lg~~~~~~g~~ 102 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDL 102 (142)
T ss_dssp CTHHHHHHHHHHHHTTCH
T ss_pred CcHHHHHHHHHHHHcCCH
Confidence 999999999999888877
No 119
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.29 E-value=6.1e-12 Score=136.75 Aligned_cols=164 Identities=10% Similarity=-0.054 Sum_probs=115.2
Q ss_pred ccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHH
Q psy11688 48 NQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYE 126 (546)
Q Consensus 48 ~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~ 126 (546)
.|++++|+..|+++++.+|+ ..+++++|.++..+|++++|++.++++++++|++..+++.+|.+|..+|++++|++.|+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 81 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQ 81 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 47899999999999999995 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccccccccccc---cccchhHhh
Q psy11688 127 AVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVC---GDIHGQFYD 203 (546)
Q Consensus 127 kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~~vi---GDihg~~~~ 203 (546)
++++++|++..++..++.++...++.+ .+. ....+++...|.........+..+... |+...+...
T Consensus 82 ~al~~~p~~~~~~~~la~~~~~~g~~~--------~A~---~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~ 150 (568)
T 2vsy_A 82 QASDAAPEHPGIALWLGHALEDAGQAE--------AAA---AAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQ 150 (568)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHH--------HHH---HHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHH--------HHH---HHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 999999999999999999998877663 333 334444555555444433334445556 777778888
Q ss_pred HHHHHHHhCCCCCCCCeeeec
Q psy11688 204 LMNIFELNGLPSPDNPYLFNG 224 (546)
Q Consensus 204 l~~il~~~~~~~~~~~~~~lG 224 (546)
+.++++..+. ....+..++
T Consensus 151 ~~~al~~~p~--~~~~~~~l~ 169 (568)
T 2vsy_A 151 VRAAVAQGVG--AVEPFAFLS 169 (568)
T ss_dssp HHHHHHHTCC--CSCHHHHTT
T ss_pred HHHHHhcCCc--ccChHHHhC
Confidence 8888886432 233455555
No 120
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.28 E-value=1e-11 Score=113.31 Aligned_cols=127 Identities=16% Similarity=0.094 Sum_probs=108.6
Q ss_pred CChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCcHHHH
Q psy11688 27 VSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYL-KTEAIGYALNDASKAIELDQTYTKAY 105 (546)
Q Consensus 27 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~-~~g~~~~Al~~~~~al~l~p~~~~a~ 105 (546)
+...+|+.+.++..+|..+.+.|++++|+..|+++++.+|++..+..++.+.. ..++..+|++.++++++++|+++.++
T Consensus 32 al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~ 111 (176)
T 2r5s_A 32 LSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELA 111 (176)
T ss_dssp SCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHH
Confidence 45788999999999999999999999999999999999996555555554432 33445568999999999999999999
Q ss_pred HHHHHHHHHhcChHHHHHHHHHhhccCCCC--cchhcccccchhhhhhhh
Q psy11688 106 YRRAAAYMSLGKFKLALRDYEAVHKARPND--KDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 106 ~~lg~~~~~~g~~~eA~~~~~kal~l~P~~--~~~~~~l~~~~~~l~~~~ 153 (546)
+.+|.++...|++++|+..|+++++++|+. ..++..++.++...++.+
T Consensus 112 ~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 161 (176)
T 2r5s_A 112 CELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGN 161 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999986 458888888887776653
No 121
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.28 E-value=5.9e-12 Score=114.52 Aligned_cols=111 Identities=14% Similarity=0.097 Sum_probs=99.3
Q ss_pred HHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHH-HHHhcCh-
Q psy11688 42 ANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAA-YMSLGKF- 118 (546)
Q Consensus 42 g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~-~~~~g~~- 118 (546)
+..+...|++++|+..++++++.+|+ ..++..+|.++...|++++|+..++++++++|+++.+++.+|.+ +...|++
T Consensus 17 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~ 96 (177)
T 2e2e_A 17 LHQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHM 96 (177)
T ss_dssp TCCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCC
T ss_pred hhhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcc
Confidence 34456789999999999999999995 89999999999999999999999999999999999999999999 8899999
Q ss_pred -HHHHHHHHHhhccCCCCcchhcccccchhhhhhh
Q psy11688 119 -KLALRDYEAVHKARPNDKDAKAKFTECNKIVKRM 152 (546)
Q Consensus 119 -~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~ 152 (546)
++|+..|+++++++|++..++..++.++...+++
T Consensus 97 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 131 (177)
T 2e2e_A 97 TAQTRAMIDKALALDSNEITALMLLASDAFMQANY 131 (177)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccH
Confidence 9999999999999999999999999998877766
No 122
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.27 E-value=9.6e-12 Score=134.99 Aligned_cols=120 Identities=12% Similarity=0.140 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
|.++..+..+|..+.+.|++++|+..|+++++.+|+ ..++..++.++.+.|++++|++.++++++.+|++..++..+|.
T Consensus 302 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 381 (597)
T 2xpi_A 302 EKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGI 381 (597)
T ss_dssp GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHH
Confidence 355777888888888888888888888888877763 4445555555555555555555555555555555555555555
Q ss_pred HHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhh
Q psy11688 111 AYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKR 151 (546)
Q Consensus 111 ~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~ 151 (546)
+|...|++++|++.|+++++++|++..++..++.++...++
T Consensus 382 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 422 (597)
T 2xpi_A 382 YYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGE 422 (597)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 55555555555555555555555555444444444443333
No 123
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.27 E-value=8.4e-12 Score=120.83 Aligned_cols=124 Identities=20% Similarity=0.188 Sum_probs=113.0
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------CC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHh---
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVN--------PT-AIYYANRSFAYLKTEAIGYALNDASKAIEL--- 97 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~--------p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l--- 97 (546)
+.|..+..+..+|..++..|++++|+..|++++++. |. ..++.++|.++..+|++++|++.+++++++
T Consensus 38 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 117 (283)
T 3edt_B 38 DHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 117 (283)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 458889999999999999999999999999999873 32 789999999999999999999999999998
Q ss_pred -----CCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhcc--------CCCCcchhcccccchhhhhhhh
Q psy11688 98 -----DQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKA--------RPNDKDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 98 -----~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l--------~P~~~~~~~~l~~~~~~l~~~~ 153 (546)
+|....++..+|.++..+|++++|++.|++++++ .|....++..++.++...++.+
T Consensus 118 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 186 (283)
T 3edt_B 118 VLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQ 186 (283)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHH
T ss_pred HcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHH
Confidence 5788899999999999999999999999999999 7777778888898888877764
No 124
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.26 E-value=7.1e-12 Score=125.25 Aligned_cols=210 Identities=7% Similarity=-0.046 Sum_probs=142.1
Q ss_pred hhhHHHHHHHHHHHHHHHH-------ccCH-------HHHHHHHHHHHH-hCCC-HHHHHHHHHHHHHccCHHHHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFK-------NQAY-------NKAIELYSAAIE-VNPT-AIYYANRSFAYLKTEAIGYALNDAS 92 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~-------~g~~-------~~Ai~~~~~al~-~~p~-~~a~~nla~~~~~~g~~~~Al~~~~ 92 (546)
..+|..++.|...|..+.. .|++ ++|+..|++|++ ++|+ ..+|.++|.++...|++++|.+.|+
T Consensus 44 ~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~ 123 (308)
T 2ond_A 44 LVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYN 123 (308)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4577888899999998874 5775 999999999999 7995 8899999999999999999999999
Q ss_pred HHHHhCCCcHH-HHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhh-hhhhhhhhhchHHHHHHHHHHH
Q psy11688 93 KAIELDQTYTK-AYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKI-VKRMQIKGKLHRKYAYRILMDI 170 (546)
Q Consensus 93 ~al~l~p~~~~-a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~-l~~~~~~~~l~~~~~~~il~~a 170 (546)
++++++|+++. +|..+|.++...|++++|++.|+++++.+|.+..++...+.+... .++ ...+..+++.+
T Consensus 124 ~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~--------~~~A~~~~~~a 195 (308)
T 2ond_A 124 RLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKD--------KSVAFKIFELG 195 (308)
T ss_dssp HHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCC--------HHHHHHHHHHH
T ss_pred HHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC--------HHHHHHHHHHH
Confidence 99999999987 999999999999999999999999999999876665433322211 121 23444555544
Q ss_pred HhhhhcCCcccccccccccccccccccchhHhhHHHHHHHhCCCCCCC--CeeeeccccccCCChHHHHHHHhhhhhcCC
Q psy11688 171 KALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDN--PYLFNGDFVDRGSFSVECIFTLFGFKLLYP 248 (546)
Q Consensus 171 ~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~~--~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p 248 (546)
.+. .|....+....+.-....|+...+...+.++++....++... .+...+.+..+-.+..++...+......+|
T Consensus 196 l~~---~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p 272 (308)
T 2ond_A 196 LKK---YGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFR 272 (308)
T ss_dssp HHH---HTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTT
T ss_pred HHh---CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcc
Confidence 444 444333322222223345666666666666666432232211 122233443333344455555555545555
Q ss_pred C
Q psy11688 249 N 249 (546)
Q Consensus 249 ~ 249 (546)
+
T Consensus 273 ~ 273 (308)
T 2ond_A 273 E 273 (308)
T ss_dssp T
T ss_pred c
Confidence 4
No 125
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.25 E-value=2.8e-11 Score=120.04 Aligned_cols=138 Identities=12% Similarity=0.006 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHc-cCHHHHHHHHHHHHHhCCCc--
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-------AIYYANRSFAYLKT-EAIGYALNDASKAIELDQTY-- 101 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-------~~a~~nla~~~~~~-g~~~~Al~~~~~al~l~p~~-- 101 (546)
+..+.++.++|.++.+.|++++|+.+|++|+++.|. +.++.++|.+|... |++++|+..|++|+++.|+.
T Consensus 74 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~ 153 (292)
T 1qqe_A 74 DEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS 153 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCC
Confidence 345788899999999999999999999999998772 56889999999995 99999999999999998754
Q ss_pred ----HHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcch-------hcccccchhhhhhhhhhhhchHHHHHHHHHHH
Q psy11688 102 ----TKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA-------KAKFTECNKIVKRMQIKGKLHRKYAYRILMDI 170 (546)
Q Consensus 102 ----~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~-------~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a 170 (546)
..++.++|.++..+|++++|+..|++++++.|++... +..++.++...+++ ..++...
T Consensus 154 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~-----------~~A~~~~ 222 (292)
T 1qqe_A 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDA-----------VAAARTL 222 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCH-----------HHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCH-----------HHHHHHH
Confidence 5678899999999999999999999999999887653 34455555544443 2344445
Q ss_pred HhhhhcCCcc
Q psy11688 171 KALFMTQDSL 180 (546)
Q Consensus 171 ~eiL~~~p~~ 180 (546)
.+.+...|..
T Consensus 223 ~~al~l~p~~ 232 (292)
T 1qqe_A 223 QEGQSEDPNF 232 (292)
T ss_dssp HGGGCC----
T ss_pred HHHHhhCCCC
Confidence 5555555543
No 126
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.25 E-value=2.3e-11 Score=120.86 Aligned_cols=119 Identities=10% Similarity=0.007 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHH----HHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFA----YLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~----~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
...+++..+|..+.+.|++++|+..|+++++.+|+.. ..+++.+ +...|++++|+..|+++++.+|+++.+++.+
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~-~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 128 DSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDAT-LTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcH-HHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 4467888899999999999999999999999999632 2233333 3345899999999999999999999999999
Q ss_pred HHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhh
Q psy11688 109 AAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRM 152 (546)
Q Consensus 109 g~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~ 152 (546)
|.++..+|++++|++.|+++++++|+++.++.+++.++...++.
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~ 250 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKP 250 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999888776654
No 127
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.24 E-value=6.5e-11 Score=100.60 Aligned_cols=104 Identities=30% Similarity=0.437 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
|.....+...|..+...|++++|+..++++++.+|+ ..++.++|.++...|++++|++.++++++.+|++..+++.+|.
T Consensus 32 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 111 (136)
T 2fo7_A 32 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGN 111 (136)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 344677888999999999999999999999999995 8899999999999999999999999999999999999999999
Q ss_pred HHHHhcChHHHHHHHHHhhccCCCC
Q psy11688 111 AYMSLGKFKLALRDYEAVHKARPND 135 (546)
Q Consensus 111 ~~~~~g~~~eA~~~~~kal~l~P~~ 135 (546)
++...|++++|+..++++++.+|++
T Consensus 112 ~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 112 AYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999863
No 128
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.24 E-value=1.5e-11 Score=121.89 Aligned_cols=126 Identities=9% Similarity=-0.060 Sum_probs=115.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHH
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYY 106 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~ 106 (546)
...+|++++++..+|..+.+.|++++|+..|+++++.+|+ .......+..+...++.++|++.++++++++|+++.+++
T Consensus 144 l~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~ 223 (287)
T 3qou_A 144 WQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALAT 223 (287)
T ss_dssp HHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHH
Confidence 3567788899999999999999999999999999999997 566777777888999999999999999999999999999
Q ss_pred HHHHHHHHhcChHHHHHHHHHhhccCCCC--cchhcccccchhhhhhhh
Q psy11688 107 RRAAAYMSLGKFKLALRDYEAVHKARPND--KDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 107 ~lg~~~~~~g~~~eA~~~~~kal~l~P~~--~~~~~~l~~~~~~l~~~~ 153 (546)
.+|.++...|++++|++.|+++++.+|++ ..++..++.++..+++.+
T Consensus 224 ~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 272 (287)
T 3qou_A 224 QLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGD 272 (287)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999998 778888988888777654
No 129
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.23 E-value=3.9e-11 Score=119.20 Aligned_cols=205 Identities=7% Similarity=-0.033 Sum_probs=149.8
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEV--NPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR 107 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~--~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~ 107 (546)
++....++...+..+...+++++|++.+++++.. +|+ +.+++.+|.++...|++++|++.+++ |++..++..
T Consensus 61 ~~~~~~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~ 135 (291)
T 3mkr_A 61 SAPELQAVRMFAEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAM 135 (291)
T ss_dssp SCHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHH
T ss_pred CChhHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHH
Confidence 3446788888999999999999999999999876 584 88999999999999999999999988 899999999
Q ss_pred HHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCccccccccc
Q psy11688 108 RAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVED 187 (546)
Q Consensus 108 lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~ 187 (546)
+|.++..+|++++|++.|+++++.+|++.......+.+.... ..+...+++....+++...|....+....
T Consensus 136 l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~---------~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 136 TVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAA---------GGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH---------CTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHh---------CchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 999999999999999999999999998653322212111111 01223344455556666677655555444
Q ss_pred ccccccccccchhHhhHHHHHHHhCCCCCCCCeeeecc-ccccCCChHHHHHHHhhhhhcCCCeE
Q psy11688 188 EAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGD-FVDRGSFSVECIFTLFGFKLLYPNHF 251 (546)
Q Consensus 188 ~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD-~vdrG~~~~e~l~~l~~l~~~~p~~v 251 (546)
+..+...|+...+...+.++++..+ ...+.+..+|- +...|....++..++..+....|++.
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p--~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDS--GHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHP 269 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCh
Confidence 5556778888888888889888743 33334555663 34556555556677777766666543
No 130
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.23 E-value=1.3e-11 Score=121.53 Aligned_cols=181 Identities=14% Similarity=0.071 Sum_probs=139.7
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCC-HHHHHHHHHHHHHccCHHHHHHHHH
Q psy11688 22 PAPKEVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEV--------NPT-AIYYANRSFAYLKTEAIGYALNDAS 92 (546)
Q Consensus 22 ~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~--------~p~-~~a~~nla~~~~~~g~~~~Al~~~~ 92 (546)
...+....++|..+..+..+|..++..|++++|+..|++++++ +|. ..++.++|.++...|++++|+..++
T Consensus 14 ~~~q~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 93 (311)
T 3nf1_A 14 LYFQGGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLN 93 (311)
T ss_dssp GSCSSSCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccccCCCCcchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 3455556788999999999999999999999999999999996 343 7899999999999999999999999
Q ss_pred HHHHh--------CCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccC--------CCCcchhcccccchhhhhhhhhhh
Q psy11688 93 KAIEL--------DQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKAR--------PNDKDAKAKFTECNKIVKRMQIKG 156 (546)
Q Consensus 93 ~al~l--------~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~--------P~~~~~~~~l~~~~~~l~~~~~~~ 156 (546)
+++++ +|....++..+|.++..+|++++|++.|++++++. |....++..++.++...+++
T Consensus 94 ~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~---- 169 (311)
T 3nf1_A 94 DALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKY---- 169 (311)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCH----
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCH----
Confidence 99988 46778899999999999999999999999999884 55566777788887776665
Q ss_pred hchHHHHHHHHHHHHhhhhc-----CCcccccccccccccccccccchhHhhHHHHHHH
Q psy11688 157 KLHRKYAYRILMDIKALFMT-----QDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFEL 210 (546)
Q Consensus 157 ~l~~~~~~~il~~a~eiL~~-----~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~ 210 (546)
..+...++++.+.... .|.........+..+...|+...+...+.++++.
T Consensus 170 ----~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 170 ----EEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp ----HHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3344444544444322 2222222222334455667777777777777764
No 131
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.23 E-value=1.7e-11 Score=105.79 Aligned_cols=82 Identities=22% Similarity=0.167 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchh
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
+.++.++|.++++.|+|++|+..|++|++++|+++.+|.++|.+|..+|++++|+++|+++++++|++...+..++.++.
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999988765554444443
Q ss_pred hh
Q psy11688 148 IV 149 (546)
Q Consensus 148 ~l 149 (546)
.+
T Consensus 88 ~l 89 (127)
T 4gcn_A 88 RA 89 (127)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 132
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.22 E-value=2.8e-11 Score=117.18 Aligned_cols=155 Identities=14% Similarity=0.016 Sum_probs=119.6
Q ss_pred HHHccCHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChH
Q psy11688 45 HFKNQAYNKAIELYSAAIEVNP-----TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFK 119 (546)
Q Consensus 45 ~~~~g~~~~Ai~~~~~al~~~p-----~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~ 119 (546)
+...|++++|+..|+++++..| ++.+++++|.++...|++++|+..++++++++|+++.+|..+|.++...|+++
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~ 94 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFD 94 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHH
T ss_pred cCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHH
Confidence 3446899999999999999743 37899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccccccccccccccccccch
Q psy11688 120 LALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHG 199 (546)
Q Consensus 120 eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i~~~~~~~~~viGDihg 199 (546)
+|++.|+++++++|++..++..++.++...+++ ..+...++++. ...|........ .......|+...
T Consensus 95 ~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~--------~~A~~~~~~a~---~~~~~~~~~~~~-~~~~~~~~~~~~ 162 (275)
T 1xnf_A 95 AAYEAFDSVLELDPTYNYAHLNRGIALYYGGRD--------KLAQDDLLAFY---QDDPNDPFRSLW-LYLAEQKLDEKQ 162 (275)
T ss_dssp HHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCH--------HHHHHHHHHHH---HHCTTCHHHHHH-HHHHHHHHCHHH
T ss_pred HHHHHHHHHHhcCccccHHHHHHHHHHHHhccH--------HHHHHHHHHHH---HhCCCChHHHHH-HHHHHHhcCHHH
Confidence 999999999999999999999999999877766 33344444443 334433221110 011233455555
Q ss_pred hHhhHHHHHHHh
Q psy11688 200 QFYDLMNIFELN 211 (546)
Q Consensus 200 ~~~~l~~il~~~ 211 (546)
+...+.+++...
T Consensus 163 A~~~~~~~~~~~ 174 (275)
T 1xnf_A 163 AKEVLKQHFEKS 174 (275)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHhcC
Confidence 555565666553
No 133
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.21 E-value=3.8e-11 Score=123.84 Aligned_cols=212 Identities=11% Similarity=-0.000 Sum_probs=146.1
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh------
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-----AIYYANRSFAYLKTEAIGYALNDASKAIEL------ 97 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-----~~a~~nla~~~~~~g~~~~Al~~~~~al~l------ 97 (546)
..++..+..+..+|..++..|++++|+..|+++++++|+ ..++.++|.+|..+|++++|+..+++++++
T Consensus 42 ~~~~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 121 (411)
T 4a1s_A 42 DGGSSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMND 121 (411)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred cchhHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccC
Confidence 345788899999999999999999999999999999995 368999999999999999999999999998
Q ss_pred CCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhcc------CCCCcchhcccccchhhhhh----------hhhhhhchHH
Q psy11688 98 DQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKA------RPNDKDAKAKFTECNKIVKR----------MQIKGKLHRK 161 (546)
Q Consensus 98 ~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l------~P~~~~~~~~l~~~~~~l~~----------~~~~~~l~~~ 161 (546)
+|....++..+|.+|..+|++++|+..|++++++ .|....++..++.++...++ .... .-..+
T Consensus 122 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a-~~~~~ 200 (411)
T 4a1s_A 122 RLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDV-KEALT 200 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHH-HHHHH
T ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhh-hHHHH
Confidence 6788899999999999999999999999999998 45556678888888877777 1100 00012
Q ss_pred HHHHHHHHHHhhhhcCCc---ccccccccccccccccccchhHhhHHHHHHHhCCCCCC----CCeeeeccccccCCChH
Q psy11688 162 YAYRILMDIKALFMTQDS---LVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPD----NPYLFNGDFVDRGSFSV 234 (546)
Q Consensus 162 ~~~~il~~a~eiL~~~p~---~~~i~~~~~~~~~viGDihg~~~~l~~il~~~~~~~~~----~~~~~lGD~vdrG~~~~ 234 (546)
.+...+.++.++....+. ........+..+...|+...+...+.++++........ ..+..+|...-.-.+..
T Consensus 201 ~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 280 (411)
T 4a1s_A 201 RAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFE 280 (411)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHH
Confidence 233333333333322211 11122222334556677777777777776654321110 03445565444444444
Q ss_pred HHHHHHh
Q psy11688 235 ECIFTLF 241 (546)
Q Consensus 235 e~l~~l~ 241 (546)
+++.++.
T Consensus 281 ~A~~~~~ 287 (411)
T 4a1s_A 281 DAAEHYK 287 (411)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
No 134
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.20 E-value=5.6e-11 Score=118.70 Aligned_cols=174 Identities=13% Similarity=-0.025 Sum_probs=131.2
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HH-HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AI-YYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~-a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
+|+.+..|...|..+.+.|++++|+..|+++++++|+ .. +|.++|.++.+.|++++|++.|++|++.+|....+|...
T Consensus 95 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~ 174 (308)
T 2ond_A 95 LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTA 174 (308)
T ss_dssp TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHH
T ss_pred CcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 5667789999999999999999999999999999995 55 999999999999999999999999999999998888877
Q ss_pred HHHHHH-hcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCc-ccccccc
Q psy11688 109 AAAYMS-LGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDS-LVHITVE 186 (546)
Q Consensus 109 g~~~~~-~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~-~~~i~~~ 186 (546)
+..... +|++++|++.|+++++.+|+++.++..++..+...++. ..+..+++++.+.....|. ...+...
T Consensus 175 a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~--------~~A~~~~~~al~~~~l~p~~~~~l~~~ 246 (308)
T 2ond_A 175 ALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNED--------NNTRVLFERVLTSGSLPPEKSGEIWAR 246 (308)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCH--------HHHHHHHHHHHHSSSSCGGGCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCH--------HHHHHHHHHHHhccCCCHHHHHHHHHH
Confidence 666443 79999999999999999999999998888877666655 4455555555443111221 1111111
Q ss_pred cccccccccccchhHhhHHHHHHHhC
Q psy11688 187 DEAKFTVCGDIHGQFYDLMNIFELNG 212 (546)
Q Consensus 187 ~~~~~~viGDihg~~~~l~~il~~~~ 212 (546)
...-....|+.......+.++++..+
T Consensus 247 ~~~~~~~~g~~~~a~~~~~~a~~~~p 272 (308)
T 2ond_A 247 FLAFESNIGDLASILKVEKRRFTAFR 272 (308)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHcc
Confidence 01112235666666666666666544
No 135
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.19 E-value=7.8e-11 Score=100.73 Aligned_cols=100 Identities=13% Similarity=0.091 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhh
Q psy11688 69 IYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKI 148 (546)
Q Consensus 69 ~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~ 148 (546)
..++.+|.++.+.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++..++..++.++..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhhhhhhhhchHHHHHHHHHHHHhhhhcCCc
Q psy11688 149 VKRMQIKGKLHRKYAYRILMDIKALFMTQDS 179 (546)
Q Consensus 149 l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~ 179 (546)
.++.+ +++....+++...|.
T Consensus 98 ~g~~~-----------~A~~~~~~al~~~P~ 117 (121)
T 1hxi_A 98 EHNAN-----------AALASLRAWLLSQPQ 117 (121)
T ss_dssp HHHHH-----------HHHHHHHHHHC----
T ss_pred cCCHH-----------HHHHHHHHHHHhCcC
Confidence 76663 344444555555554
No 136
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.19 E-value=2.1e-10 Score=91.35 Aligned_cols=85 Identities=31% Similarity=0.355 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
+..+..++.+|..++..|++++|+..|+++++.+|+ ..+++++|.++..+|++++|+..++++++++|+++.++..+|.
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 356788889999999999999999999999999995 8889999999999999999999999999999999999999999
Q ss_pred HHHHhc
Q psy11688 111 AYMSLG 116 (546)
Q Consensus 111 ~~~~~g 116 (546)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 887764
No 137
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.19 E-value=7.6e-11 Score=99.20 Aligned_cols=85 Identities=18% Similarity=0.160 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhc
Q psy11688 52 NKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHK 130 (546)
Q Consensus 52 ~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~ 130 (546)
++|+..|+++++.+|+ ..+++++|.++...|++++|+..++++++++|++..+|+.+|.+|..+|++++|+..|+++++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3689999999999995 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCc
Q psy11688 131 ARPNDK 136 (546)
Q Consensus 131 l~P~~~ 136 (546)
++|++.
T Consensus 82 ~~~~~~ 87 (115)
T 2kat_A 82 AAQSRG 87 (115)
T ss_dssp HHHHHT
T ss_pred hccccc
Confidence 988643
No 138
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.19 E-value=3e-11 Score=119.80 Aligned_cols=120 Identities=13% Similarity=0.056 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc----
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP---T----AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY---- 101 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p---~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~---- 101 (546)
+..+.+...|..+...|+|++|+..|.+|+++.+ + +.+|.++|.+|..+|++++|+.++++|+++.|+.
T Consensus 35 ~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~ 114 (292)
T 1qqe_A 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFR 114 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 3344556667788899999999999999999854 1 6799999999999999999999999999998754
Q ss_pred --HHHHHHHHHHHHHh-cChHHHHHHHHHhhccCCCC------cchhcccccchhhhhhh
Q psy11688 102 --TKAYYRRAAAYMSL-GKFKLALRDYEAVHKARPND------KDAKAKFTECNKIVKRM 152 (546)
Q Consensus 102 --~~a~~~lg~~~~~~-g~~~eA~~~~~kal~l~P~~------~~~~~~l~~~~~~l~~~ 152 (546)
..++.++|.+|... |++++|+.+|++|+++.|++ ..++..++.++...+++
T Consensus 115 ~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~ 174 (292)
T 1qqe_A 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQY 174 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCH
Confidence 56899999999996 99999999999999998865 33566667777666655
No 139
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.3e-10 Score=99.29 Aligned_cols=86 Identities=21% Similarity=0.158 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchh
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
+..+.++|.+++..|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|+++++++|++..++..++.++.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhh
Q psy11688 148 IVKRMQ 153 (546)
Q Consensus 148 ~l~~~~ 153 (546)
..++++
T Consensus 84 ~~~~~~ 89 (126)
T 3upv_A 84 AVKEYA 89 (126)
T ss_dssp HTTCHH
T ss_pred HHhCHH
Confidence 887763
No 140
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.17 E-value=5.4e-11 Score=125.21 Aligned_cols=174 Identities=9% Similarity=-0.066 Sum_probs=132.0
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--------C-HHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhCC
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP--------T-AIYYANRSFAYLKTE--AIGYALNDASKAIELDQ 99 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p--------~-~~a~~nla~~~~~~g--~~~~Al~~~~~al~l~p 99 (546)
++..+..+.++|.+++..|++++|+.+|++++++.+ + +.++.++|.++...+ +|++|++.|++|++++|
T Consensus 90 ~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p 169 (472)
T 4g1t_A 90 EIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKP 169 (472)
T ss_dssp TTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHST
T ss_pred chHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCC
Confidence 445567788999999999999999999999998743 2 789999998887764 79999999999999999
Q ss_pred CcHHHHHHHHHHHHH---hcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhc
Q psy11688 100 TYTKAYYRRAAAYMS---LGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMT 176 (546)
Q Consensus 100 ~~~~a~~~lg~~~~~---~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~ 176 (546)
+++.++..+|.++.. .+++++|++.|+++++++|++..++..++.....+.... +....+.....+++..
T Consensus 170 ~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~-------~~~~~a~~~~~~al~~ 242 (472)
T 4g1t_A 170 KNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEG-------EEEGEGEKLVEEALEK 242 (472)
T ss_dssp TCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC-------------CHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHh
Confidence 999999999998665 467789999999999999999998877765443332211 1122233334445555
Q ss_pred CCcccccccccccccccccccchhHhhHHHHHHHh
Q psy11688 177 QDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 177 ~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~ 211 (546)
.|....+....+..+...|+...+...+.++++..
T Consensus 243 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 277 (472)
T 4g1t_A 243 APGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYI 277 (472)
T ss_dssp CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhC
Confidence 66655554444555677788888888888888764
No 141
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.17 E-value=6.7e-11 Score=96.49 Aligned_cols=91 Identities=19% Similarity=0.119 Sum_probs=83.5
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCC-HH-HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Q psy11688 39 KAEANEHFKNQAYNKAIELYSAAIEVNPT-AI-YYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLG 116 (546)
Q Consensus 39 ~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~-a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g 116 (546)
+++|..+++.|++++|+..|+++++.+|+ .. +++++|.++..+|++++|++.++++++++|++..++.. +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~ 75 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------K 75 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------H
Confidence 67899999999999999999999999995 78 99999999999999999999999999999999998755 7
Q ss_pred ChHHHHHHHHHhhccCCCCcc
Q psy11688 117 KFKLALRDYEAVHKARPNDKD 137 (546)
Q Consensus 117 ~~~eA~~~~~kal~l~P~~~~ 137 (546)
.+.+|+..|++++..+|++..
T Consensus 76 ~~~~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 76 MVMDILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp HHHHHHHHHCCTTHHHHCCSS
T ss_pred HHHHHHHHHHHHhccCccccc
Confidence 788899999999999887654
No 142
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.16 E-value=6e-11 Score=116.74 Aligned_cols=125 Identities=19% Similarity=0.204 Sum_probs=111.9
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------CC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVN--------PT-AIYYANRSFAYLKTEAIGYALNDASKAIELD-- 98 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~--------p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~-- 98 (546)
..+..+..+..+|..+...|++++|+..|+++++.. |. ..++.++|.++..+|++++|+..+++++++.
T Consensus 64 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 64 DHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 467888999999999999999999999999999873 32 7899999999999999999999999999984
Q ss_pred ------CCcHHHHHHHHHHHHHhcChHHHHHHHHHhhcc--------CCCCcchhcccccchhhhhhhhh
Q psy11688 99 ------QTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKA--------RPNDKDAKAKFTECNKIVKRMQI 154 (546)
Q Consensus 99 ------p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l--------~P~~~~~~~~l~~~~~~l~~~~~ 154 (546)
|....++..+|.++..+|++++|++.|++++++ +|....++..++.++...++++.
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 213 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQ 213 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHH
Confidence 667889999999999999999999999999998 67677788888888887777643
No 143
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.14 E-value=3.5e-10 Score=114.66 Aligned_cols=102 Identities=21% Similarity=0.149 Sum_probs=94.4
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.++..+..+.++|.++++.|+|++|+..|++|++++|+ ..+|+++|.+|..+|++++|+++|+++++++|++..++..+
T Consensus 191 ~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l 270 (336)
T 1p5q_A 191 AQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQL 270 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 45556789999999999999999999999999999995 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhcChHHH-HHHHHHhhcc
Q psy11688 109 AAAYMSLGKFKLA-LRDYEAVHKA 131 (546)
Q Consensus 109 g~~~~~~g~~~eA-~~~~~kal~l 131 (546)
|.++..++++++| ...|++++..
T Consensus 271 ~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 271 AVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 5577777643
No 144
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.13 E-value=2.6e-10 Score=123.86 Aligned_cols=153 Identities=10% Similarity=0.033 Sum_probs=129.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHccC----------HHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHcc--CHHHHHHHHHHH
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQA----------YNKAIELYSAAIEVNPT-AIYYANRSFAYLKTE--AIGYALNDASKA 94 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~----------~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g--~~~~Al~~~~~a 94 (546)
...+|+...+|..++.++.+.++ +++|+..++++++.+|+ ..+|+.|+.++.+++ ++++|++.++++
T Consensus 56 l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~ 135 (567)
T 1dce_A 56 LGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARF 135 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHH
T ss_pred HHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHH
Confidence 35678888999999999999988 99999999999999995 999999999999999 779999999999
Q ss_pred HHhCCCcHHHHHHHHHHHHHhc-ChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhh---hhhchHHHHHHHHHHH
Q psy11688 95 IELDQTYTKAYYRRAAAYMSLG-KFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQI---KGKLHRKYAYRILMDI 170 (546)
Q Consensus 95 l~l~p~~~~a~~~lg~~~~~~g-~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~---~~~l~~~~~~~il~~a 170 (546)
+++||.|..||..++.++..++ .+++|+++++++++.+|+|..+|..++.+...+..... ...+..+...+.++.+
T Consensus 136 l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~ 215 (567)
T 1dce_A 136 LEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELV 215 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHH
T ss_pred HhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999888766532211 0112234455556666
Q ss_pred HhhhhcCCcc
Q psy11688 171 KALFMTQDSL 180 (546)
Q Consensus 171 ~eiL~~~p~~ 180 (546)
.+++...|.-
T Consensus 216 ~~ai~~~P~~ 225 (567)
T 1dce_A 216 QNAFFTDPND 225 (567)
T ss_dssp HHHHHHCSSC
T ss_pred HHHHhhCCCC
Confidence 6666666653
No 145
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.13 E-value=1.7e-10 Score=102.81 Aligned_cols=86 Identities=15% Similarity=0.037 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------cHH-----HHHHHHHHHHHhcChHHHHHHHHHhhcc----
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQT-------YTK-----AYYRRAAAYMSLGKFKLALRDYEAVHKA---- 131 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~-------~~~-----a~~~lg~~~~~~g~~~eA~~~~~kal~l---- 131 (546)
+..+.++|..+.++|+|++|+..|++|++++|+ +.. +|.++|.++..+|+|++|+.+|++|+++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 677899999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---CCCCcchh----cccccchhhhhhhh
Q psy11688 132 ---RPNDKDAK----AKFTECNKIVKRMQ 153 (546)
Q Consensus 132 ---~P~~~~~~----~~l~~~~~~l~~~~ 153 (546)
+|++..+| ++++.++..+++++
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~e 119 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGA 119 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHH
Confidence 99999999 99999999988873
No 146
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.13 E-value=1.7e-10 Score=111.56 Aligned_cols=103 Identities=21% Similarity=0.204 Sum_probs=96.2
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHh---
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEV--------NPT-AIYYANRSFAYLKTEAIGYALNDASKAIEL--- 97 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~--------~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l--- 97 (546)
+.|..+..+..+|.++...|++++|+..|.+++++ +|. ..++.++|.++..+|++++|+..+++++++
T Consensus 80 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 159 (283)
T 3edt_B 80 DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYAT 159 (283)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999998 353 789999999999999999999999999999
Q ss_pred -----CCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccC
Q psy11688 98 -----DQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKAR 132 (546)
Q Consensus 98 -----~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~ 132 (546)
+|....++..+|.++..+|++++|++.|++++++.
T Consensus 160 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 160 RLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRA 199 (283)
T ss_dssp HSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999999999873
No 147
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.13 E-value=7.8e-11 Score=117.56 Aligned_cols=97 Identities=8% Similarity=-0.070 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhCCC-HHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhCCCcHHHHHHHHHHH----HHh---cChHHHH
Q psy11688 53 KAIELYSAAIEVNPT-AIYYANRSFAYLKTE--AIGYALNDASKAIELDQTYTKAYYRRAAAY----MSL---GKFKLAL 122 (546)
Q Consensus 53 ~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g--~~~~Al~~~~~al~l~p~~~~a~~~lg~~~----~~~---g~~~eA~ 122 (546)
+|+..++++|.++|+ ..+|..|+.++..++ ++++|++.+++++..+|++..+|..++.++ ..+ +++++++
T Consensus 51 ~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL 130 (306)
T 3dra_A 51 RALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREF 130 (306)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHH
T ss_pred HHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHH
Confidence 455555555555553 445555555555444 555555555555555555555555555444 333 4444555
Q ss_pred HHHHHhhccCCCCcchhcccccchhhh
Q psy11688 123 RDYEAVHKARPNDKDAKAKFTECNKIV 149 (546)
Q Consensus 123 ~~~~kal~l~P~~~~~~~~l~~~~~~l 149 (546)
+.++++++.+|+|..+|...+.+...+
T Consensus 131 ~~~~~~l~~~pkny~aW~~R~~vl~~l 157 (306)
T 3dra_A 131 DILEAMLSSDPKNHHVWSYRKWLVDTF 157 (306)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 555555555555555544444444433
No 148
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.12 E-value=3.1e-10 Score=110.62 Aligned_cols=190 Identities=13% Similarity=0.104 Sum_probs=134.7
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCcHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP-TAIYYANRSFAYLK----TEAIGYALNDASKAIELDQTYTKAY 105 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p-~~~a~~nla~~~~~----~g~~~~Al~~~~~al~l~p~~~~a~ 105 (546)
+|.++++++.+|..++..|++++|+.+|+++++ | +..+++++|.+|.. .+++++|+..++++++++ ++.++
T Consensus 2 ~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~ 77 (273)
T 1ouv_A 2 AEQDPKELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGC 77 (273)
T ss_dssp ---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHH
T ss_pred CCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHH
Confidence 456688999999999999999999999999998 4 48899999999999 999999999999999996 89999
Q ss_pred HHHHHHHHH----hcChHHHHHHHHHhhccCCCCcchhcccccchhh----hhhhhhhhhchHHHHHHHHHHHHhhhhcC
Q psy11688 106 YRRAAAYMS----LGKFKLALRDYEAVHKARPNDKDAKAKFTECNKI----VKRMQIKGKLHRKYAYRILMDIKALFMTQ 177 (546)
Q Consensus 106 ~~lg~~~~~----~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~----l~~~~~~~~l~~~~~~~il~~a~eiL~~~ 177 (546)
+.+|.+|.. .+++++|++.|+++++.+ ++.++..++.++.. .++. +.+...++++.+ ..
T Consensus 78 ~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~--------~~A~~~~~~a~~---~~ 144 (273)
T 1ouv_A 78 HLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDF--------KKAVEYFTKACD---LN 144 (273)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCH--------HHHHHHHHHHHH---TT
T ss_pred HHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCH--------HHHHHHHHHHHh---cC
Confidence 999999999 999999999999999874 78888888888765 4443 233333333332 22
Q ss_pred Ccccccccccccccc----cccccchhHhhHHHHHHHhCCCCCCCCeeeecccccc----CCChHHHHHHHhhh
Q psy11688 178 DSLVHITVEDEAKFT----VCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDR----GSFSVECIFTLFGF 243 (546)
Q Consensus 178 p~~~~i~~~~~~~~~----viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdr----G~~~~e~l~~l~~l 243 (546)
+. ......+..+. +.+|...++..+.++++. + ....+..+|....+ -.+..+++.++...
T Consensus 145 ~~--~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a 212 (273)
T 1ouv_A 145 DG--DGCTILGSLYDAGRGTPKDLKKALASYDKACDL-K---DSPGCFNAGNMYHHGEGATKNFKEALARYSKA 212 (273)
T ss_dssp CH--HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-T---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHH
T ss_pred cH--HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-C---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHH
Confidence 11 11001111111 155656666666666654 1 22345667766555 44555666655443
No 149
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=99.12 E-value=2.6e-11 Score=123.14 Aligned_cols=69 Identities=17% Similarity=0.262 Sum_probs=59.7
Q ss_pred hhhHhhCcchhhhHHHHHHHHHHhcCCC--------CCcceeeccccCCCCCchHHHHHHHHHhcc---cCCCcEEEEcC
Q psy11688 457 QTYKAQGKLHRKYAYRILMDIKKKKILN--------LDFTQLFNGDFVDRGSFSVECIFTLFGFKL---LYPNHFFMARV 525 (546)
Q Consensus 457 ~~f~~~~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~---~~~~~~~~~rg 525 (546)
..+...|||||++ ..|.++++..+.. ..+.+||+|||||||++|.||+.+|.++|. .+|..++++||
T Consensus 71 ~~i~vigDiHG~~--~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v~~v~G 148 (342)
T 2z72_A 71 KKVVALSDVHGQY--DVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMG 148 (342)
T ss_dssp CEEEEECCCTTCH--HHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCEEEEECCCCCH--HHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeEEEEec
Confidence 4467899999995 5688888876543 246799999999999999999999999996 79999999999
Q ss_pred CC
Q psy11688 526 EC 527 (546)
Q Consensus 526 nh 527 (546)
||
T Consensus 149 NH 150 (342)
T 2z72_A 149 NH 150 (342)
T ss_dssp HH
T ss_pred CC
Confidence 99
No 150
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.11 E-value=2.8e-10 Score=99.95 Aligned_cols=123 Identities=13% Similarity=0.108 Sum_probs=101.8
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc-
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-------AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY- 101 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-------~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~- 101 (546)
+.+..+..+..+|..++..|++++|+..+++++++.+. ..++.++|.++..+|++++|+..+++++++.+..
T Consensus 4 d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 83 (164)
T 3ro3_A 4 SRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK 83 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC
Confidence 45567889999999999999999999999999998662 4689999999999999999999999999886543
Q ss_pred -----HHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCC------cchhcccccchhhhhhh
Q psy11688 102 -----TKAYYRRAAAYMSLGKFKLALRDYEAVHKARPND------KDAKAKFTECNKIVKRM 152 (546)
Q Consensus 102 -----~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~------~~~~~~l~~~~~~l~~~ 152 (546)
..++..+|.++..+|++++|++.+++++++.+.. ..++..++.++...++.
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 145 (164)
T 3ro3_A 84 DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNH 145 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred CcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCH
Confidence 6689999999999999999999999999875432 22444555555544444
No 151
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.11 E-value=3.7e-10 Score=101.38 Aligned_cols=85 Identities=16% Similarity=0.120 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchh
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
+.+++.+|.+++..|+|++|+..|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++..++..++.++.
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhh
Q psy11688 148 IVKRM 152 (546)
Q Consensus 148 ~l~~~ 152 (546)
..+++
T Consensus 91 ~~g~~ 95 (164)
T 3sz7_A 91 DMADY 95 (164)
T ss_dssp HTTCH
T ss_pred HccCH
Confidence 88776
No 152
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.10 E-value=5.7e-10 Score=99.17 Aligned_cols=103 Identities=15% Similarity=0.122 Sum_probs=92.5
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.+|+.+..+...|.++...|++++|+..|+++++.+|+ ..+++++|.++..+|++++|++.++++++++|++..++..+
T Consensus 42 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~ 121 (166)
T 1a17_A 42 LNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKY 121 (166)
T ss_dssp HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 34556788999999999999999999999999999995 89999999999999999999999999999999999988555
Q ss_pred H--HHHHHhcChHHHHHHHHHhhccC
Q psy11688 109 A--AAYMSLGKFKLALRDYEAVHKAR 132 (546)
Q Consensus 109 g--~~~~~~g~~~eA~~~~~kal~l~ 132 (546)
+ ..+...|++++|++.++++..+.
T Consensus 122 ~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 122 QECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHh
Confidence 4 44889999999999999876553
No 153
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.09 E-value=5.9e-10 Score=121.04 Aligned_cols=141 Identities=12% Similarity=0.051 Sum_probs=114.5
Q ss_pred hhhHHHHHHHH---HHHHHHHHccCH-HHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccC----------HHHHHHHHHH
Q psy11688 29 VEDKERAEKLK---AEANEHFKNQAY-NKAIELYSAAIEVNPT-AIYYANRSFAYLKTEA----------IGYALNDASK 93 (546)
Q Consensus 29 ~~~~~~a~~~~---~~g~~~~~~g~~-~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~----------~~~Al~~~~~ 93 (546)
.+...+.+.+. .......+.|.+ ++|++.++++++.+|+ ..+|+.|+.++..+++ +++|++.+++
T Consensus 19 ~~~~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~ 98 (567)
T 1dce_A 19 LEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLES 98 (567)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHH
Confidence 34444454443 333344556665 6789999999999996 9999999999999999 9999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHhc--ChHHHHHHHHHhhccCCCCcchhcccccchhhhh-hhhhhhhchHHHHHHHHHHH
Q psy11688 94 AIELDQTYTKAYYRRAAAYMSLG--KFKLALRDYEAVHKARPNDKDAKAKFTECNKIVK-RMQIKGKLHRKYAYRILMDI 170 (546)
Q Consensus 94 al~l~p~~~~a~~~lg~~~~~~g--~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~-~~~~~~~l~~~~~~~il~~a 170 (546)
+++.+|++..+|+.++.++..++ ++++|++.++++++++|.|..+|...+.+...++ .. .+.++.+
T Consensus 99 ~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~-----------~~el~~~ 167 (567)
T 1dce_A 99 CLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAP-----------AEELAFT 167 (567)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCH-----------HHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCCh-----------HHHHHHH
Confidence 99999999999999999999999 6699999999999999999999999988877665 22 2344555
Q ss_pred HhhhhcCCcc
Q psy11688 171 KALFMTQDSL 180 (546)
Q Consensus 171 ~eiL~~~p~~ 180 (546)
.+.+...|.-
T Consensus 168 ~~~I~~~p~n 177 (567)
T 1dce_A 168 DSLITRNFSN 177 (567)
T ss_dssp HTTTTTTCCC
T ss_pred HHHHHHCCCC
Confidence 5666666653
No 154
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.07 E-value=3.3e-10 Score=116.35 Aligned_cols=124 Identities=12% Similarity=0.094 Sum_probs=106.8
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-------C-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP-------T-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY 101 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p-------~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~ 101 (546)
+.+..+..+..+|..++..|++++|+.++.+|+++.+ . +.++.++|.+|..+|++++|+..+++|+++.+..
T Consensus 138 ~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 217 (383)
T 3ulq_A 138 DRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE 217 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc
Confidence 4667889999999999999999999999999998744 1 5789999999999999999999999999886533
Q ss_pred ------HHHHHHHHHHHHHhcChHHHHHHHHHhhc-----cC-CCCcchhcccccchhhhhhhh
Q psy11688 102 ------TKAYYRRAAAYMSLGKFKLALRDYEAVHK-----AR-PNDKDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 102 ------~~a~~~lg~~~~~~g~~~eA~~~~~kal~-----l~-P~~~~~~~~l~~~~~~l~~~~ 153 (546)
..++.++|.+|..+|++++|+++|+++++ .+ |....++..++.++...++.+
T Consensus 218 ~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 281 (383)
T 3ulq_A 218 KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKID 281 (383)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHH
T ss_pred CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHH
Confidence 35899999999999999999999999999 45 767778888888888777663
No 155
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.07 E-value=3.9e-10 Score=115.79 Aligned_cols=166 Identities=13% Similarity=0.112 Sum_probs=124.8
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHh---CCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-------CcHH
Q psy11688 38 LKAEANEHFKNQAYNKAIELYSAAIEV---NPT----AIYYANRSFAYLKTEAIGYALNDASKAIELDQ-------TYTK 103 (546)
Q Consensus 38 ~~~~g~~~~~~g~~~~Ai~~~~~al~~---~p~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p-------~~~~ 103 (546)
++.+|..++..|+|++|+..|++|+++ .++ +.+++++|.+|..+|++++|+..+++|+++.+ ....
T Consensus 106 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 185 (383)
T 3ulq_A 106 NFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQ 185 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHH
Confidence 445999999999999999999999987 232 68999999999999999999999999999843 3456
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhhccCCCCc------chhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcC
Q psy11688 104 AYYRRAAAYMSLGKFKLALRDYEAVHKARPNDK------DAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQ 177 (546)
Q Consensus 104 a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~------~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~ 177 (546)
++..+|.+|..+|++++|++.|++++++.|+.. .++..++.++...+++ +.+...++++.++....
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~--------~~A~~~~~~al~~~~~~ 257 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQY--------EDAIPYFKRAIAVFEES 257 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCH--------HHHHHHHHHHHHHHHhh
Confidence 899999999999999999999999999876544 3677788888777766 33444445554443322
Q ss_pred ---CcccccccccccccccccccchhHhhHHHHHHHh
Q psy11688 178 ---DSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 178 ---p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~ 211 (546)
|.........+..+...|+...+...+.++++..
T Consensus 258 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 258 NILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp TCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 3333332233444556666666666666666653
No 156
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.07 E-value=3.5e-10 Score=93.61 Aligned_cols=82 Identities=11% Similarity=0.097 Sum_probs=72.9
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCC------cchhc
Q psy11688 67 TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPND------KDAKA 140 (546)
Q Consensus 67 ~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~------~~~~~ 140 (546)
++.++.++|.++...|++++|+..++++++++|+++.+++++|.++..+|++++|++.|+++++++|++ ..++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 367899999999999999999999999999999999999999999999999999999999999999998 44444
Q ss_pred ccccchhh
Q psy11688 141 KFTECNKI 148 (546)
Q Consensus 141 ~l~~~~~~ 148 (546)
.++.++..
T Consensus 83 ~~~~~~~~ 90 (111)
T 2l6j_A 83 RLELAQGA 90 (111)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 157
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.06 E-value=5.3e-10 Score=89.00 Aligned_cols=80 Identities=28% Similarity=0.407 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchh
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
+.+++++|.++...|++++|+..++++++++|+++.+++.+|.++..+|++++|++.|+++++++|++..++..++.++.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999998887777654
No 158
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.06 E-value=5.5e-10 Score=110.42 Aligned_cols=118 Identities=17% Similarity=0.163 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCcH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-----AIYYANRSFAYLKTEAIGYALNDASKAIEL------DQTYT 102 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-----~~a~~nla~~~~~~g~~~~Al~~~~~al~l------~p~~~ 102 (546)
....++..|..++..|++++|+..|+++++.+|+ ..++..+|.++...|++++|++.+++++++ .|...
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 4667889999999999999999999999999995 578999999999999999999999999988 55668
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcc------hhcccccchhhhhh
Q psy11688 103 KAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKD------AKAKFTECNKIVKR 151 (546)
Q Consensus 103 ~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~------~~~~l~~~~~~l~~ 151 (546)
.++..+|.++..+|++++|+..+++++++.|.... ++..++.++...++
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 89999999999999999999999999998776544 66777777776666
No 159
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.05 E-value=9.8e-10 Score=94.73 Aligned_cols=89 Identities=15% Similarity=0.123 Sum_probs=83.5
Q ss_pred hCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhccc
Q psy11688 64 VNP-TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKF 142 (546)
Q Consensus 64 ~~p-~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l 142 (546)
.+| ++..++.+|.+++..|++++|+..++++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++..++..+
T Consensus 4 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 83 (137)
T 3q49_B 4 MKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFL 83 (137)
T ss_dssp --CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHH
Confidence 344 4899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhh
Q psy11688 143 TECNKIVKRM 152 (546)
Q Consensus 143 ~~~~~~l~~~ 152 (546)
+.++...+++
T Consensus 84 ~~~~~~~~~~ 93 (137)
T 3q49_B 84 GQCQLEMESY 93 (137)
T ss_dssp HHHHHHTTCH
T ss_pred HHHHHHHhhH
Confidence 9999888776
No 160
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.05 E-value=6.7e-10 Score=108.17 Aligned_cols=112 Identities=17% Similarity=0.152 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCcHH
Q psy11688 32 KERAEKLKAEANEHFK----NQAYNKAIELYSAAIEVNPTAIYYANRSFAYLK----TEAIGYALNDASKAIELDQTYTK 103 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~----~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~----~g~~~~Al~~~~~al~l~p~~~~ 103 (546)
+..+.+++.+|..+.. .+++++|+..|++|++.+ ++.+++++|.+|.. .+++++|+..++++++.+ ++.
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~ 111 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAE 111 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHH
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--Ccc
Confidence 3445788999999999 999999999999999986 79999999999999 999999999999999985 899
Q ss_pred HHHHHHHHHHH----hcChHHHHHHHHHhhccCCCCcchhcccccchhh
Q psy11688 104 AYYRRAAAYMS----LGKFKLALRDYEAVHKARPNDKDAKAKFTECNKI 148 (546)
Q Consensus 104 a~~~lg~~~~~----~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~ 148 (546)
+++.+|.+|.. .+++++|+.+|+++++.+ +..++..++.++..
T Consensus 112 a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 112 GCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDA 158 (273)
T ss_dssp HHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHc
Confidence 99999999999 999999999999999986 56677777777654
No 161
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.04 E-value=4.6e-10 Score=114.83 Aligned_cols=117 Identities=17% Similarity=0.165 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCcHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-----AIYYANRSFAYLKTEAIGYALNDASKAIEL------DQTYTK 103 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-----~~a~~nla~~~~~~g~~~~Al~~~~~al~l------~p~~~~ 103 (546)
+.++..+|..++..|++++|+..|+++++.+|+ ..++..+|.++...|++++|+..+++++++ .|....
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 88 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAK 88 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 667899999999999999999999999999994 478999999999999999999999999988 456688
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcc------hhcccccchhhhhh
Q psy11688 104 AYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKD------AKAKFTECNKIVKR 151 (546)
Q Consensus 104 a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~------~~~~l~~~~~~l~~ 151 (546)
++..+|.++..+|++++|+..+++++++.|.... ++..++.++...++
T Consensus 89 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 89 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999876533 67777777777666
No 162
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.04 E-value=1.2e-09 Score=109.81 Aligned_cols=154 Identities=10% Similarity=0.031 Sum_probs=128.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHccC----------HHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHccC--HHHHHHHHHHH
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQA----------YNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEA--IGYALNDASKA 94 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~----------~~~Ai~~~~~al~~~p-~~~a~~nla~~~~~~g~--~~~Al~~~~~a 94 (546)
...+|+...+|..++.++...+. +++++..+++++..+| +..+|..|+.++..+++ ++++++.++++
T Consensus 57 L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~ 136 (331)
T 3dss_A 57 LGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARF 136 (331)
T ss_dssp HTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred HHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHH
Confidence 46788999999999999987766 7899999999999999 59999999999999994 99999999999
Q ss_pred HHhCCCcHHHHHHHHHHHHHhcC-hHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhh---hhhchHHHHHHHHHHH
Q psy11688 95 IELDQTYTKAYYRRAAAYMSLGK-FKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQI---KGKLHRKYAYRILMDI 170 (546)
Q Consensus 95 l~l~p~~~~a~~~lg~~~~~~g~-~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~---~~~l~~~~~~~il~~a 170 (546)
++++|.|..||..++.+...+|. ++++++++.++++.+|.|..+|..++.+...+..... ......+.....++.+
T Consensus 137 l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~ 216 (331)
T 3dss_A 137 LEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELV 216 (331)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHH
Confidence 99999999999999999999999 5999999999999999999999998888766522110 1112334455666777
Q ss_pred HhhhhcCCccc
Q psy11688 171 KALFMTQDSLV 181 (546)
Q Consensus 171 ~eiL~~~p~~~ 181 (546)
.+++...|.-.
T Consensus 217 ~~ai~~~P~d~ 227 (331)
T 3dss_A 217 QNAFFTDPNDQ 227 (331)
T ss_dssp HHHHHHSTTCH
T ss_pred HHHHHhCCCCH
Confidence 77777777643
No 163
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.04 E-value=3.1e-11 Score=127.85 Aligned_cols=126 Identities=12% Similarity=0.123 Sum_probs=107.3
Q ss_pred HccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHH
Q psy11688 47 KNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY---------------TKAYYRRAA 110 (546)
Q Consensus 47 ~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~---------------~~a~~~lg~ 110 (546)
..++|++|+..|+++++.+|+ +.++.++|.+++++|+|++|+..|++|++++|++ ..+|+++|.
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~ 325 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAM 325 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHH
Confidence 445777889999999998885 8999999999999999999999999999999998 799999999
Q ss_pred HHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCccccc
Q psy11688 111 AYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHI 183 (546)
Q Consensus 111 ~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~i 183 (546)
||..+|+|++|+.+|+++++++|++..+++.++.++..+++++ .++..+.+++...|+...+
T Consensus 326 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~-----------~A~~~~~~al~l~P~~~~a 387 (457)
T 1kt0_A 326 CYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFE-----------SAKGDFEKVLEVNPQNKAA 387 (457)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH-----------HHHHHHHHHHTTC----CH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHH-----------HHHHHHHHHHHhCCCCHHH
Confidence 9999999999999999999999999999999999998887763 3445555566666655444
No 164
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.03 E-value=1.9e-09 Score=108.29 Aligned_cols=151 Identities=12% Similarity=0.020 Sum_probs=123.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCCcHH
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQ--AYNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEA-IGYALNDASKAIELDQTYTK 103 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g--~~~~Ai~~~~~al~~~p-~~~a~~nla~~~~~~g~-~~~Al~~~~~al~l~p~~~~ 103 (546)
...+|+...+|..++.++...+ ++++++..++++++.+| |..+|..++.+....+. +++++++++++++.+|.|..
T Consensus 101 L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~S 180 (331)
T 3dss_A 101 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 180 (331)
T ss_dssp HHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHH
T ss_pred HHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHH
Confidence 3568889999999999999988 49999999999999999 69999999999999999 69999999999999999999
Q ss_pred HHHHHHHHHHHh--------------cChHHHHHHHHHhhccCCCCcchhcccccchhhh-hhhhhhhhchHHHHHHHHH
Q psy11688 104 AYYRRAAAYMSL--------------GKFKLALRDYEAVHKARPNDKDAKAKFTECNKIV-KRMQIKGKLHRKYAYRILM 168 (546)
Q Consensus 104 a~~~lg~~~~~~--------------g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l-~~~~~~~~l~~~~~~~il~ 168 (546)
||..++.++..+ +.++++++++.+++..+|+|..+|..+..+.... +..... .-..+...+.++
T Consensus 181 AW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~-~~~~~~l~~el~ 259 (331)
T 3dss_A 181 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELS-VEKSTVLQSELE 259 (331)
T ss_dssp HHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccc-hHHHHHHHHHHH
Confidence 999999999988 6689999999999999999999997554443322 211100 111234556666
Q ss_pred HHHhhhhcCCc
Q psy11688 169 DIKALFMTQDS 179 (546)
Q Consensus 169 ~a~eiL~~~p~ 179 (546)
.+.+++..+|+
T Consensus 260 ~~~elle~~pd 270 (331)
T 3dss_A 260 SCKELQELEPE 270 (331)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHhhCcc
Confidence 67777777775
No 165
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.03 E-value=4.9e-10 Score=92.26 Aligned_cols=88 Identities=17% Similarity=0.172 Sum_probs=82.8
Q ss_pred CCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCC--Ccchhcc
Q psy11688 65 NPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPN--DKDAKAK 141 (546)
Q Consensus 65 ~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~--~~~~~~~ 141 (546)
+|+ ..++..+|.++...|++++|+..++++++++|++..+++.+|.++..+|++++|++.|+++++.+|+ +..++..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 563 7789999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cccchhhh-hhh
Q psy11688 142 FTECNKIV-KRM 152 (546)
Q Consensus 142 l~~~~~~l-~~~ 152 (546)
++.++... ++.
T Consensus 82 l~~~~~~~~~~~ 93 (112)
T 2kck_A 82 KADALRYIEGKE 93 (112)
T ss_dssp HHHHHTTCSSCS
T ss_pred HHHHHHHHhCCH
Confidence 99998877 766
No 166
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.02 E-value=3.5e-10 Score=93.04 Aligned_cols=72 Identities=19% Similarity=0.243 Sum_probs=59.4
Q ss_pred CCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCc
Q psy11688 65 NPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDK 136 (546)
Q Consensus 65 ~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~ 136 (546)
+|+ +.+++++|.++..+|++++|+..++++++++|+++.+|+.+|.+|..+|++++|++.|++++++.|++.
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 75 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEG 75 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCC
Confidence 564 788888888888888888888888888888888888888888888888888888888888888766543
No 167
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.02 E-value=4.7e-09 Score=103.73 Aligned_cols=137 Identities=13% Similarity=0.095 Sum_probs=112.0
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc-
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-------AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY- 101 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-------~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~- 101 (546)
.+++....+..++..++..|+|++|+..+.++++..|. ...++.+|.++...|++++|+..+++|+++.+..
T Consensus 70 ~~~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~ 149 (293)
T 2qfc_A 70 SDIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI 149 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSS
T ss_pred cchhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCC
Confidence 45677788899999999999999999999999998773 3557789999999999999999999999876543
Q ss_pred -----HHHHHHHHHHHHHhcChHHHHHHHHHhh---ccCCCCc----chhcccccchhhhhhhhhhhhchHHHHHHHHHH
Q psy11688 102 -----TKAYYRRAAAYMSLGKFKLALRDYEAVH---KARPNDK----DAKAKFTECNKIVKRMQIKGKLHRKYAYRILMD 169 (546)
Q Consensus 102 -----~~a~~~lg~~~~~~g~~~eA~~~~~kal---~l~P~~~----~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~ 169 (546)
..++..+|.+|..+|++++|+..|++++ +..|++. .++.+++.++...+++ +.+...+++
T Consensus 150 ~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y--------~~Al~~~~k 221 (293)
T 2qfc_A 150 DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRY--------EESLYQVNK 221 (293)
T ss_dssp CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhH--------HHHHHHHHH
Confidence 6689999999999999999999999999 4456543 4777888888877777 344455555
Q ss_pred HHhhh
Q psy11688 170 IKALF 174 (546)
Q Consensus 170 a~eiL 174 (546)
+.++.
T Consensus 222 al~~~ 226 (293)
T 2qfc_A 222 AIEIS 226 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 168
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.01 E-value=3.5e-09 Score=106.93 Aligned_cols=125 Identities=10% Similarity=0.024 Sum_probs=98.8
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCcHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTE-AIGYALNDASKAIELDQTYTKAYY 106 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g-~~~~Al~~~~~al~l~p~~~~a~~ 106 (546)
.=.++..+++-.......+.+..++|+..++++|.++|+ ..+|..|+.++..++ .++++++.+++++..+|++..+|.
T Consensus 48 ~y~~~y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~ 127 (349)
T 3q7a_A 48 MYSEEYKDAMDYFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWH 127 (349)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred eeCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHH
Confidence 344555555555555555566667888888888888885 888888888888888 488888888888888888888888
Q ss_pred HHHHHHHHh-c-ChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhh
Q psy11688 107 RRAAAYMSL-G-KFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 107 ~lg~~~~~~-g-~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~ 153 (546)
.++.++..+ + +++++++.++++++.+|+|..+|...+.+...++..+
T Consensus 128 hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 128 HRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 888888887 7 8888888888888888888888888777776665544
No 169
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.00 E-value=2.4e-09 Score=90.40 Aligned_cols=75 Identities=12% Similarity=0.016 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAY 105 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~ 105 (546)
+|+.+.++..+|.+++..|+|++|+..|+++++++|+ ..+++++|.++..+|++++|++.++++++.+|+++...
T Consensus 23 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 98 (117)
T 3k9i_A 23 GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQ 98 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHH
T ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 7899999999999999999999999999999999995 99999999999999999999999999999999998764
No 170
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.00 E-value=1.4e-09 Score=111.57 Aligned_cols=139 Identities=13% Similarity=0.044 Sum_probs=101.0
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP---T-----AIYYANRSFAYLKTEAIGYALNDASKAIELDQ-- 99 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p---~-----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p-- 99 (546)
+.+..+..+..+|..++..|++++|+.++++|+++.+ + +.++.++|.+|..+|++++|++.+++|+++.+
T Consensus 136 ~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 215 (378)
T 3q15_A 136 DDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI 215 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc
Confidence 3566777888888888888888888888888887643 1 56777888888888888888888888887632
Q ss_pred ----CcHHHHHHHHHHHHHhcChHHHHHHHHHhhc-----cCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHH
Q psy11688 100 ----TYTKAYYRRAAAYMSLGKFKLALRDYEAVHK-----ARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDI 170 (546)
Q Consensus 100 ----~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~-----l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a 170 (546)
....++.++|.+|..+|++++|++.|+++++ .+|....++..++.++...++. +.+...++++
T Consensus 216 ~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~--------~~A~~~~~~a 287 (378)
T 3q15_A 216 QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQT--------QKAFQFIEEG 287 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCH--------HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCH--------HHHHHHHHHH
Confidence 1245678888888888888888888888888 6666666777777777766655 3444555555
Q ss_pred Hhhhhc
Q psy11688 171 KALFMT 176 (546)
Q Consensus 171 ~eiL~~ 176 (546)
.++...
T Consensus 288 l~~~~~ 293 (378)
T 3q15_A 288 LDHITA 293 (378)
T ss_dssp HHHCCT
T ss_pred HHHHHH
Confidence 555443
No 171
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.00 E-value=7.9e-10 Score=98.34 Aligned_cols=76 Identities=14% Similarity=0.111 Sum_probs=69.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHhCCC-HHHHHHHHHHHHHcc-----------CHH
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQAY----------NKAIELYSAAIEVNPT-AIYYANRSFAYLKTE-----------AIG 85 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~~----------~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g-----------~~~ 85 (546)
...+|+++++|++.|.++...+++ ++|+..|++||+++|+ ..+|+++|.+|..+| +++
T Consensus 29 i~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~ 108 (158)
T 1zu2_A 29 YKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFD 108 (158)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHH
Confidence 367888999999999999998875 5999999999999996 999999999999985 899
Q ss_pred HHHHHHHHHHHhCCCcHH
Q psy11688 86 YALNDASKAIELDQTYTK 103 (546)
Q Consensus 86 ~Al~~~~~al~l~p~~~~ 103 (546)
+|+++|++|++++|++..
T Consensus 109 eA~~~~~kAl~l~P~~~~ 126 (158)
T 1zu2_A 109 LATQFFQQAVDEQPDNTH 126 (158)
T ss_dssp HHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHhCCCCHH
Confidence 999999999999999854
No 172
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.00 E-value=3.1e-09 Score=104.99 Aligned_cols=122 Identities=11% Similarity=-0.005 Sum_probs=100.7
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----C--HHHHHHHHHHHHHccCHHHHHHHHHHHH---HhCCC
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP-----T--AIYYANRSFAYLKTEAIGYALNDASKAI---ELDQT 100 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p-----~--~~a~~nla~~~~~~g~~~~Al~~~~~al---~l~p~ 100 (546)
.......++..|..+...|++++|+..|.+|++..+ . ..++.++|.+|..+|++++|+..+++|+ +..|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~ 190 (293)
T 2qfc_A 111 FQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD 190 (293)
T ss_dssp HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc
Confidence 334556667789999999999999999999998654 1 5689999999999999999999999999 55666
Q ss_pred cH----HHHHHHHHHHHHhcChHHHHHHHHHhhccCCCC------cchhcccccchhhhhhh
Q psy11688 101 YT----KAYYRRAAAYMSLGKFKLALRDYEAVHKARPND------KDAKAKFTECNKIVKRM 152 (546)
Q Consensus 101 ~~----~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~------~~~~~~l~~~~~~l~~~ 152 (546)
+. .+++++|.+|..+|+|++|+.+|++++++.++. ..++..++.++...++.
T Consensus 191 ~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~ 252 (293)
T 2qfc_A 191 NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYE 252 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCC
T ss_pred cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCc
Confidence 43 689999999999999999999999999886431 34566667777666655
No 173
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=98.99 E-value=1.6e-10 Score=113.74 Aligned_cols=72 Identities=18% Similarity=0.176 Sum_probs=60.4
Q ss_pred HhhCcchhhhHHHHHHHHHHhcCC-CCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC----cccccch
Q psy11688 460 KAQGKLHRKYAYRILMDIKKKKIL-NLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC----IFTLFGF 534 (546)
Q Consensus 460 ~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh----~~~~~gf 534 (546)
...|||||+| ..|.++++..+. +....+||+|||||||+.|.||+.+|.++ |..++++|||| ++..|||
T Consensus 4 ~vigDiHG~~--~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l----~~~~~~v~GNHe~~~l~~~~g~ 77 (280)
T 2dfj_A 4 YLIGDVHGCY--DELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSL----GDSVRLVLGNHDLHLLAVFAGI 77 (280)
T ss_dssp EEECCCCSCH--HHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHT----GGGEEECCCHHHHHHHHHHTTS
T ss_pred EEEecCCCCH--HHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhC----CCceEEEECCCcHHHHhHhcCC
Confidence 3579999995 558888887776 45678999999999999999999999987 45799999999 7778888
Q ss_pred hhh
Q psy11688 535 KLL 537 (546)
Q Consensus 535 ~~e 537 (546)
..+
T Consensus 78 ~~~ 80 (280)
T 2dfj_A 78 SRN 80 (280)
T ss_dssp SCC
T ss_pred ccc
Confidence 753
No 174
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.98 E-value=7.1e-10 Score=110.66 Aligned_cols=122 Identities=12% Similarity=0.062 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP---T----AIYYANRSFAYLKTEAIGYALNDASKAIELDQT--- 100 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p---~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~--- 100 (546)
-.+....+...|..+...|+|++|+..|.+|+++.+ + +.+|.++|.+|..+|++++|+..+++|+++.+.
T Consensus 32 ~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~ 111 (307)
T 2ifu_A 32 YDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGT 111 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC
Confidence 344445555555555555555555555555555543 1 345555555555555555555555555555321
Q ss_pred ---cHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCC------cchhcccccchhhhhhhh
Q psy11688 101 ---YTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPND------KDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 101 ---~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~------~~~~~~l~~~~~~l~~~~ 153 (546)
...++.++|.+|.. |++++|+++|++|+++.|.. ..++..++.++...++++
T Consensus 112 ~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 172 (307)
T 2ifu_A 112 PDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFD 172 (307)
T ss_dssp HHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHH
Confidence 12345555555555 55555555555555554432 233444444444444443
No 175
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.98 E-value=1.9e-09 Score=99.33 Aligned_cols=135 Identities=12% Similarity=0.015 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------C-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---CC---
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVN------P-TAIYYANRSFAYLKTEAIGYALNDASKAIEL---DQ--- 99 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~------p-~~~a~~nla~~~~~~g~~~~Al~~~~~al~l---~p--- 99 (546)
..+..+..+|..+...|++++|+..|++++++. | ...++.++|.++..+|++++|+..+++++++ .+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 467889999999999999999999999999842 2 2788999999999999999999999999998 33
Q ss_pred -CcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcc------hhcccccchhhhhhhhhhhhchHHHHHHHHHHHHh
Q psy11688 100 -TYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKD------AKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKA 172 (546)
Q Consensus 100 -~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~------~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~e 172 (546)
....++.++|.++..+|++++|+..+++++++.+.... ++..++.++...++. ..+...++++.+
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~--------~~A~~~~~~al~ 175 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNL--------LEAQQHWLRARD 175 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCH--------HHHHHHHHHHHH
Confidence 34567999999999999999999999999977443222 234555555555544 344445555554
Q ss_pred hhh
Q psy11688 173 LFM 175 (546)
Q Consensus 173 iL~ 175 (546)
+..
T Consensus 176 ~~~ 178 (203)
T 3gw4_A 176 IFA 178 (203)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 176
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.97 E-value=1.8e-09 Score=110.70 Aligned_cols=104 Identities=18% Similarity=0.125 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----HHHHHHHHHHHHHccCHHHHHHHHHHHHH-----hC
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP---T----AIYYANRSFAYLKTEAIGYALNDASKAIE-----LD 98 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p---~----~~a~~nla~~~~~~g~~~~Al~~~~~al~-----l~ 98 (546)
.+..+..+...|.++...|+|++|+..|.+|+++.+ + +.++.++|.+|..+|++++|+..++++++ .+
T Consensus 178 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~ 257 (378)
T 3q15_A 178 SIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVP 257 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCG
T ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCC
Confidence 456788999999999999999999999999999743 2 67899999999999999999999999999 78
Q ss_pred CCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCC
Q psy11688 99 QTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 99 p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
|..+.+++.+|.++..+|++++|+..+++++++.+.
T Consensus 258 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 258 DLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999998765
No 177
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.97 E-value=1e-08 Score=103.51 Aligned_cols=92 Identities=5% Similarity=-0.065 Sum_probs=84.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHc-c-CHHHHHHHHHHHHHhCCCcHH
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQ-AYNKAIELYSAAIEVNPT-AIYYANRSFAYLKT-E-AIGYALNDASKAIELDQTYTK 103 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g-~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~-g-~~~~Al~~~~~al~l~p~~~~ 103 (546)
...+|+...+|..++.++...+ .+++|+..+++++..+|+ ..+|..|+.++..+ + +++++++.++++++++|.|..
T Consensus 81 L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~ 160 (349)
T 3q7a_A 81 VRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYH 160 (349)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHH
T ss_pred HHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHH
Confidence 4778888999999999999998 599999999999999995 99999999999998 7 899999999999999999999
Q ss_pred HHHHHHHHHHHhcChH
Q psy11688 104 AYYRRAAAYMSLGKFK 119 (546)
Q Consensus 104 a~~~lg~~~~~~g~~~ 119 (546)
+|..++.++..++.++
T Consensus 161 AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 161 TWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcccc
Confidence 9999999999888765
No 178
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.96 E-value=2.2e-09 Score=106.12 Aligned_cols=135 Identities=10% Similarity=-0.001 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-------CCC
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNP---T----AIYYANRSFAYLKTEAIGYALNDASKAIEL-------DQT 100 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p---~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l-------~p~ 100 (546)
...+...|..+...+++++|+.+|++|+++.+ + ..++.++|.+|..+|++++|+..+++|++. .+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 44455688888888999999999999999655 2 457999999999999999999999999952 233
Q ss_pred cHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCC------cchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhh
Q psy11688 101 YTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPND------KDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALF 174 (546)
Q Consensus 101 ~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~------~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL 174 (546)
...+++++|.+|..+|+|++|+..+++++++.++. ..++..++.++..+++. .+.+...++++.++.
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~-------~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYE-------EAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCc-------HHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999887654 44566666666655521 133445555555554
Q ss_pred hc
Q psy11688 175 MT 176 (546)
Q Consensus 175 ~~ 176 (546)
..
T Consensus 268 ~~ 269 (293)
T 3u3w_A 268 DI 269 (293)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 179
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.96 E-value=9.6e-10 Score=109.65 Aligned_cols=124 Identities=11% Similarity=0.077 Sum_probs=114.9
Q ss_pred ChhhHHHHHHHHHHHHHH----HHc---cCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHccCHH--HHHHHHHHHHHh
Q psy11688 28 SVEDKERAEKLKAEANEH----FKN---QAYNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEAIG--YALNDASKAIEL 97 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~----~~~---g~~~~Ai~~~~~al~~~p-~~~a~~nla~~~~~~g~~~--~Al~~~~~al~l 97 (546)
...+|+...+|..++.++ ... +++++++..++++++.+| +..+|..|+.+...+++++ ++++.++++++.
T Consensus 96 L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~ 175 (306)
T 3dra_A 96 ALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT 175 (306)
T ss_dssp HHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHh
Confidence 356788888999999988 666 789999999999999999 5999999999999999999 999999999999
Q ss_pred CCCcHHHHHHHHHHHHHhcC------hHHHHHHHHHhhccCCCCcchhcccccchhhhhh
Q psy11688 98 DQTYTKAYYRRAAAYMSLGK------FKLALRDYEAVHKARPNDKDAKAKFTECNKIVKR 151 (546)
Q Consensus 98 ~p~~~~a~~~lg~~~~~~g~------~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~ 151 (546)
||.|..||..++.++..+++ ++++++++++++..+|+|..++..++.+....++
T Consensus 176 d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 176 DLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp CTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC
Confidence 99999999999999999998 9999999999999999999999998888876654
No 180
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.96 E-value=3.1e-10 Score=116.95 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CC-HHHHHHHHHHHHHccC-----------------HHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVN------PT-AIYYANRSFAYLKTEA-----------------IGY 86 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~------p~-~~a~~nla~~~~~~g~-----------------~~~ 86 (546)
.+..+..+..+|..+...|++++|+..|.+++++. |. ..++.++|.+|..+|+ +++
T Consensus 122 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~ 201 (411)
T 4a1s_A 122 RLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTR 201 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHH
Confidence 34445555555555555555555555555555542 11 4455555555555555 555
Q ss_pred HHHHHHHHHHhC------CCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCC
Q psy11688 87 ALNDASKAIELD------QTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 87 Al~~~~~al~l~------p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
|+..+++++++. +....++..+|.+|..+|++++|++.|++++++.|+
T Consensus 202 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 202 AVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 555555555442 222335555555555555555555555555555444
No 181
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.96 E-value=3.6e-09 Score=89.39 Aligned_cols=89 Identities=20% Similarity=0.120 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRA 109 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg 109 (546)
.|+.+..+...|.++...|++++|+..+.++++.+|+ ..+++++|.++..+|++++|+..++++++++|++..++..+|
T Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~ 121 (131)
T 2vyi_A 42 NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLK 121 (131)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHH
Confidence 4455778999999999999999999999999999995 899999999999999999999999999999999999999999
Q ss_pred HHHHHhcChH
Q psy11688 110 AAYMSLGKFK 119 (546)
Q Consensus 110 ~~~~~~g~~~ 119 (546)
.++..+|+++
T Consensus 122 ~~~~~~~~~~ 131 (131)
T 2vyi_A 122 IAELKLREAP 131 (131)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHhcCC
Confidence 9999998863
No 182
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.96 E-value=1.6e-09 Score=97.00 Aligned_cols=86 Identities=12% Similarity=0.143 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHh------------------CCCcHHHHHHHHHHHHHhcChHHHHHHHHHhh
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIEL------------------DQTYTKAYYRRAAAYMSLGKFKLALRDYEAVH 129 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l------------------~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal 129 (546)
+..+.++|..+++.|+|++|+..|++++++ +|.+..+|+++|.||..+|++++|+.++++++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 678999999999999999999999999999 88888999999999999999999999999999
Q ss_pred ccCCCCcchhcccccchhhhhhhh
Q psy11688 130 KARPNDKDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 130 ~l~P~~~~~~~~l~~~~~~l~~~~ 153 (546)
+++|++..++..++.++..+++++
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~ 114 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLD 114 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHH
T ss_pred hcCCcchHHHHHHHHHHHHHhcHH
Confidence 999999999999999998888773
No 183
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.95 E-value=9.2e-10 Score=109.84 Aligned_cols=104 Identities=11% Similarity=-0.005 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc----
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP---T----AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY---- 101 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p---~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~---- 101 (546)
..+..+.+.|.++.+.|++++|+.+|++|+++.+ + +.++.++|.+|.. |++++|+..|++|+++.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 4567889999999999999999999999999854 1 5789999999998 99999999999999998753
Q ss_pred --HHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcc
Q psy11688 102 --TKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKD 137 (546)
Q Consensus 102 --~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~ 137 (546)
..++.++|.+|..+|++++|++.|++++++.|++..
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 190 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMEN 190 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999887653
No 184
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.94 E-value=2.9e-09 Score=87.43 Aligned_cols=88 Identities=22% Similarity=0.259 Sum_probs=72.6
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc--HHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY--TKAYY 106 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~--~~a~~ 106 (546)
.+|+.+.+++.+|.++++.|+|++|+..|+++++++|+ ..+|+++|.+|..+|++++|++.+++++++.|++ ..+..
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~ 81 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLS 81 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHH
Confidence 46777899999999999999999999999999999996 8999999999999999999999999999998753 34444
Q ss_pred HHHHHHHHhcC
Q psy11688 107 RRAAAYMSLGK 117 (546)
Q Consensus 107 ~lg~~~~~~g~ 117 (546)
.+...+...+.
T Consensus 82 ~l~~~l~~~~~ 92 (100)
T 3ma5_A 82 ELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHccc
Confidence 44444444433
No 185
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.94 E-value=4.7e-09 Score=97.20 Aligned_cols=96 Identities=15% Similarity=0.031 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYM 113 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 113 (546)
...+.++|.++++.|+|++|+..++++++++|+ ..+++++|.++..+|++++|+..++++++++|++..++..++.++.
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 167 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVN 167 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 478899999999999999999999999999995 8999999999999999999999999999999999999999999999
Q ss_pred HhcChHHHH-HHHHHhhc
Q psy11688 114 SLGKFKLAL-RDYEAVHK 130 (546)
Q Consensus 114 ~~g~~~eA~-~~~~kal~ 130 (546)
.+++.+++. ..|.+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 168 KLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999998887 44554443
No 186
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.93 E-value=1.6e-09 Score=110.74 Aligned_cols=103 Identities=15% Similarity=0.076 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHccC--------------------H
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-------AIYYANRSFAYLKTEA--------------------I 84 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-------~~a~~nla~~~~~~g~--------------------~ 84 (546)
+..+..+..+|..+...|++++|+..+++++++.|. ..++.++|.+|...|+ +
T Consensus 84 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~ 163 (406)
T 3sf4_A 84 LGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDAL 163 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHH
Confidence 344445555555555555555555555555554331 3345555555555555 5
Q ss_pred HHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCC
Q psy11688 85 GYALNDASKAIEL------DQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 85 ~~Al~~~~~al~l------~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
++|+..+++++++ .|....++..+|.++..+|++++|++.+++++++.|+
T Consensus 164 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 219 (406)
T 3sf4_A 164 QAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE 219 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Confidence 5555555555544 2233344555555555555555555555555554443
No 187
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.92 E-value=3.6e-09 Score=90.00 Aligned_cols=88 Identities=18% Similarity=0.158 Sum_probs=82.0
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.+|+.+..+..+|.++...|++++|+..++++++.+|+ ..+++++|.++..+|++++|++.++++++++|++..++..+
T Consensus 45 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 124 (133)
T 2lni_A 45 RNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGY 124 (133)
T ss_dssp TCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 34555788999999999999999999999999999995 89999999999999999999999999999999999999999
Q ss_pred HHHHHHhcC
Q psy11688 109 AAAYMSLGK 117 (546)
Q Consensus 109 g~~~~~~g~ 117 (546)
+.++..+|+
T Consensus 125 ~~~~~~~~~ 133 (133)
T 2lni_A 125 QRCMMAQYN 133 (133)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 999988764
No 188
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.92 E-value=8.3e-10 Score=112.00 Aligned_cols=102 Identities=14% Similarity=0.036 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH-H
Q psy11688 36 EKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAY-M 113 (546)
Q Consensus 36 ~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~-~ 113 (546)
..+.++|.++++.|+|++|+..|++|++++|+ ..+|+++|.+|..+|++++|+++|+++++++|++..++..++.+. .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~ 310 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ 310 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 37899999999999999999999999999995 899999999999999999999999999999999999999999994 4
Q ss_pred HhcChHHHHHHHHHhhccCCCCcc
Q psy11688 114 SLGKFKLALRDYEAVHKARPNDKD 137 (546)
Q Consensus 114 ~~g~~~eA~~~~~kal~l~P~~~~ 137 (546)
..+..++|.+.|.+++...|+++.
T Consensus 311 ~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 311 EKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCC
Confidence 567788899999999999998764
No 189
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.92 E-value=5.8e-09 Score=86.40 Aligned_cols=85 Identities=22% Similarity=0.232 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchh
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
+.+++.+|.++...|++++|+..++++++.+|+++.++..+|.++..+|++++|+..++++++.+|++..++..++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhhhh
Q psy11688 148 IVKRM 152 (546)
Q Consensus 148 ~l~~~ 152 (546)
..++.
T Consensus 84 ~~~~~ 88 (118)
T 1elw_A 84 FLNRF 88 (118)
T ss_dssp HTTCH
T ss_pred HHhhH
Confidence 77665
No 190
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.92 E-value=4.6e-09 Score=98.86 Aligned_cols=112 Identities=13% Similarity=-0.022 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcc----CHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTE----AIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g----~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.++.+++.+|..+...+++++|+.+|++|++.. ++.+++++|.+|.. + ++++|+.++++|++ +.++.+++++
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g-~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~L 91 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG-DGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVL 91 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT-CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHH
Confidence 457899999999999999999999999999863 68999999999998 7 99999999999965 5789999999
Q ss_pred HHHHHH----hcChHHHHHHHHHhhccCCC--Ccchhcccccchhh
Q psy11688 109 AAAYMS----LGKFKLALRDYEAVHKARPN--DKDAKAKFTECNKI 148 (546)
Q Consensus 109 g~~~~~----~g~~~eA~~~~~kal~l~P~--~~~~~~~l~~~~~~ 148 (546)
|.+|.. .+++++|+++|+++.+..|. ++.+...++.++..
T Consensus 92 g~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 92 ARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 999998 89999999999999999883 57888888888754
No 191
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.91 E-value=7.2e-09 Score=106.47 Aligned_cols=95 Identities=14% Similarity=0.067 Sum_probs=90.6
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.+|..+..+.++|.++++.|+|++|+.+|++|++++|+ +.+++++|.+|..+|++++|++++++|++++|++..++..+
T Consensus 268 ~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l 347 (370)
T 1ihg_A 268 LQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 347 (370)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 67888999999999999999999999999999999995 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhcChHHHHHH
Q psy11688 109 AAAYMSLGKFKLALRD 124 (546)
Q Consensus 109 g~~~~~~g~~~eA~~~ 124 (546)
+.++..++++++|.+.
T Consensus 348 ~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 348 LKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999888654
No 192
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.89 E-value=4.1e-09 Score=89.73 Aligned_cols=84 Identities=18% Similarity=0.104 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcH---HHHHHHHHHHHHhcChHHHHHHHHHhhccCCCC---cchhccc
Q psy11688 69 IYYANRSFAYLKTEAIGYALNDASKAIELDQTYT---KAYYRRAAAYMSLGKFKLALRDYEAVHKARPND---KDAKAKF 142 (546)
Q Consensus 69 ~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~---~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~---~~~~~~l 142 (546)
.+++++|.+++..|++++|+..++++++.+|+++ .+++.+|.++..+|++++|+..|+++++.+|++ +.++..+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3578999999999999999999999999999998 899999999999999999999999999999999 7778999
Q ss_pred ccchhhhhhh
Q psy11688 143 TECNKIVKRM 152 (546)
Q Consensus 143 ~~~~~~l~~~ 152 (546)
+.++...++.
T Consensus 83 a~~~~~~g~~ 92 (129)
T 2xev_A 83 GLSQYGEGKN 92 (129)
T ss_dssp HHHHHHTTCH
T ss_pred HHHHHHcCCH
Confidence 9988877766
No 193
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.88 E-value=4e-09 Score=104.13 Aligned_cols=122 Identities=14% Similarity=0.117 Sum_probs=104.4
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc--
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP---T----AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY-- 101 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p---~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~-- 101 (546)
.+..+..+...|..+...|++++|+..++++++..+ + ..++.++|.++...|++++|+..+++++++.|+.
T Consensus 179 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 258 (338)
T 3ro2_A 179 RAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD 258 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcc
Confidence 455677889999999999999999999999998765 2 4589999999999999999999999999987765
Q ss_pred ----HHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcc------hhcccccchhhhhhh
Q psy11688 102 ----TKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKD------AKAKFTECNKIVKRM 152 (546)
Q Consensus 102 ----~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~------~~~~l~~~~~~l~~~ 152 (546)
..++..+|.++..+|++++|+..+++++++.|.... ++..++.++...++.
T Consensus 259 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 319 (338)
T 3ro2_A 259 RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNH 319 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCh
Confidence 778999999999999999999999999998765432 556666666666555
No 194
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.86 E-value=5.4e-09 Score=84.94 Aligned_cols=69 Identities=20% Similarity=0.331 Sum_probs=66.1
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchh
Q psy11688 71 YANRSFAYLKTEAIGYALNDASKAIELDQTYTK-AYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAK 139 (546)
Q Consensus 71 ~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~-a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~ 139 (546)
.+++|.++...|++++|++.++++++++|+++. +++.+|.+|..+|++++|+++|+++++++|++..++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 367899999999999999999999999999999 999999999999999999999999999999998876
No 195
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.86 E-value=7.4e-09 Score=101.31 Aligned_cols=113 Identities=13% Similarity=0.010 Sum_probs=91.9
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CC-cHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT---AIYYANRSFAYLKTEAIGYALNDASKAIELD--QT-YTK 103 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~---~~a~~nla~~~~~~g~~~~Al~~~~~al~l~--p~-~~~ 103 (546)
..|... ..+.+|..+++.++|++|+..|++++...++ ..+++++|.++..+|++++|+..|++++.-. |. .++
T Consensus 131 ~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~d 209 (282)
T 4f3v_A 131 AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARA 209 (282)
T ss_dssp TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHH
T ss_pred cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHH
Confidence 456666 7888999999999999999999888765322 4688999999999999999999999998554 55 678
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhccccc
Q psy11688 104 AYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTE 144 (546)
Q Consensus 104 a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~ 144 (546)
+++++|.|+.++|+.++|...|++++..+|+ ..+...+..
T Consensus 210 a~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~~ 249 (282)
T 4f3v_A 210 IAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALKD 249 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHhC
Confidence 8999999999999999999999999999998 666554444
No 196
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.84 E-value=1.4e-08 Score=100.07 Aligned_cols=86 Identities=15% Similarity=0.116 Sum_probs=82.7
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccch
Q psy11688 67 TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECN 146 (546)
Q Consensus 67 ~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~ 146 (546)
++.++.++|.++...|+|++|+..|+++++++|+++.+|+++|.+|..+|++++|++.|+++++++|++..++..++.++
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhh
Q psy11688 147 KIVKRM 152 (546)
Q Consensus 147 ~~l~~~ 152 (546)
...+++
T Consensus 83 ~~~g~~ 88 (281)
T 2c2l_A 83 LEMESY 88 (281)
T ss_dssp HHTTCH
T ss_pred HHcCCH
Confidence 888776
No 197
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.84 E-value=5.3e-09 Score=112.42 Aligned_cols=172 Identities=7% Similarity=-0.029 Sum_probs=124.1
Q ss_pred hhhHHHHHHHHHHHHHHHH-------ccCHH-------HHHHHHHHHHH-hCCC-HHHHHHHHHHHHHccCHHHHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFK-------NQAYN-------KAIELYSAAIE-VNPT-AIYYANRSFAYLKTEAIGYALNDAS 92 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~-------~g~~~-------~Ai~~~~~al~-~~p~-~~a~~nla~~~~~~g~~~~Al~~~~ 92 (546)
..+|..++.|...|..+.+ .|+++ +|+..|++|++ .+|+ ..+|..+|..+.+.|++++|.+.|+
T Consensus 266 ~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~ 345 (530)
T 2ooe_A 266 LVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYN 345 (530)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 3456678889999998886 79987 99999999997 7995 8999999999999999999999999
Q ss_pred HHHHhCCCcH-HHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchh-hhhhhhhhhhchHHHHHHHHHHH
Q psy11688 93 KAIELDQTYT-KAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK-IVKRMQIKGKLHRKYAYRILMDI 170 (546)
Q Consensus 93 ~al~l~p~~~-~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~-~l~~~~~~~~l~~~~~~~il~~a 170 (546)
++++++|.++ .+|..+|.++.+.|++++|++.|++|++..|.+...+...+.+.. ..+ ..+.+..+++.+
T Consensus 346 ~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~--------~~~~A~~~~e~a 417 (530)
T 2ooe_A 346 RLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK--------DKSVAFKIFELG 417 (530)
T ss_dssp HHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTC--------CHHHHHHHHHHH
T ss_pred HHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcC--------ChhHHHHHHHHH
Confidence 9999999986 699999999999999999999999999998876554432222210 111 124445555555
Q ss_pred HhhhhcCCcccccccccccccccccccchhHhhHHHHHHHh
Q psy11688 171 KALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 171 ~eiL~~~p~~~~i~~~~~~~~~viGDihg~~~~l~~il~~~ 211 (546)
.+. .|+...+....+.-....|+...+...+.+++...
T Consensus 418 l~~---~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~ 455 (530)
T 2ooe_A 418 LKK---YGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSG 455 (530)
T ss_dssp HHH---HTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSC
T ss_pred HHH---CCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhcc
Confidence 444 44433322221222233455555555566666543
No 198
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.83 E-value=1.4e-08 Score=88.92 Aligned_cols=103 Identities=16% Similarity=0.114 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP---T----AIYYANRSFAYLKTEAIGYALNDASKAIELDQ----- 99 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p---~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p----- 99 (546)
...+..+...|..+...|++++|+..+++++++.+ + ..++.++|.++..+|++++|++.+++++++.+
T Consensus 46 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 125 (164)
T 3ro3_A 46 AAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDR 125 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccch
Confidence 34457889999999999999999999999998755 2 67899999999999999999999999998743
Q ss_pred -CcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCC
Q psy11688 100 -TYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 100 -~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
....++..+|.++..+|++++|++.+++++++..+
T Consensus 126 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 126 IGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 23568999999999999999999999999987543
No 199
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.82 E-value=1.6e-08 Score=99.77 Aligned_cols=171 Identities=11% Similarity=0.015 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc---
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-------AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY--- 101 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-------~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~--- 101 (546)
.+....+.+.+..++..|+|++|+..++++++..+. ...+..+|.++...+++++|+..+++|+++.+..
T Consensus 72 ~~~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 151 (293)
T 3u3w_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCT
T ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccH
Confidence 455667778899999999999999999999997773 1234469999999999999999999999975432
Q ss_pred ---HHHHHHHHHHHHHhcChHHHHHHHHHhhccC-------CCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHH
Q psy11688 102 ---TKAYYRRAAAYMSLGKFKLALRDYEAVHKAR-------PNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIK 171 (546)
Q Consensus 102 ---~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~-------P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~ 171 (546)
..++.++|.+|..+|++++|+.+|+++++.. +....++.+++.++...+++ +.+...++++.
T Consensus 152 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y--------~~A~~~~~~al 223 (293)
T 3u3w_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRY--------EESLYQVNKAI 223 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHH--------HHHHHHHHHHH
Confidence 3479999999999999999999999999532 22334677888888777776 34445555555
Q ss_pred hhhhcCCccc---ccccccccccccccc-cchhHhhHHHHHHH
Q psy11688 172 ALFMTQDSLV---HITVEDEAKFTVCGD-IHGQFYDLMNIFEL 210 (546)
Q Consensus 172 eiL~~~p~~~---~i~~~~~~~~~viGD-ihg~~~~l~~il~~ 210 (546)
++........ .+....+......|+ ...+...+.+++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 224 EISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 5544433221 122222333444553 34555555555544
No 200
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=1.6e-08 Score=87.80 Aligned_cols=86 Identities=19% Similarity=0.147 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc---HHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccc
Q psy11688 67 TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTY---TKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFT 143 (546)
Q Consensus 67 ~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~---~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~ 143 (546)
+...++.+|.++...|++++|++.++++++++|++ ..+++.+|.++..+|++++|++.|+++++++|++..++..++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 48899999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred cchhhhhhh
Q psy11688 144 ECNKIVKRM 152 (546)
Q Consensus 144 ~~~~~l~~~ 152 (546)
.++...++.
T Consensus 107 ~~~~~~~~~ 115 (148)
T 2dba_A 107 QALEKLGRL 115 (148)
T ss_dssp HHHHHHTCH
T ss_pred HHHHHcCCH
Confidence 998877766
No 201
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.82 E-value=2.3e-08 Score=83.51 Aligned_cols=85 Identities=25% Similarity=0.307 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchh
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
..+++.+|.++...|++++|++.++++++.+|++..+++.+|.++...|++++|+..|+++++.+|++..++..++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999888888887
Q ss_pred hhhhh
Q psy11688 148 IVKRM 152 (546)
Q Consensus 148 ~l~~~ 152 (546)
..++.
T Consensus 89 ~~~~~ 93 (125)
T 1na0_A 89 KQGDY 93 (125)
T ss_dssp HTTCH
T ss_pred HhcCH
Confidence 76655
No 202
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.80 E-value=1.3e-08 Score=109.25 Aligned_cols=135 Identities=14% Similarity=0.062 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-H-HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-A-IYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~-~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.|+.+..|...|..+.+.|++++|...|+++++++|+ . .+|.++|.++.+.|++++|.+.|++|++..|.....+...
T Consensus 317 ~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~ 396 (530)
T 2ooe_A 317 LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTA 396 (530)
T ss_dssp CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHH
T ss_pred CcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHH
Confidence 5667888999999999999999999999999999995 4 6999999999999999999999999999999888887776
Q ss_pred HHH-HHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhh
Q psy11688 109 AAA-YMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKAL 173 (546)
Q Consensus 109 g~~-~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~ei 173 (546)
+.+ +...|++++|...|+++++.+|+++.++..++.+....++. ..+..+++++...
T Consensus 397 a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~--------~~Ar~~~~~al~~ 454 (530)
T 2ooe_A 397 ALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNED--------NNTRVLFERVLTS 454 (530)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCH--------HHHHHHHHHHHHS
T ss_pred HHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCH--------hhHHHHHHHHHhc
Confidence 655 45699999999999999999999999998888877665554 4455555555443
No 203
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.75 E-value=2e-08 Score=94.40 Aligned_cols=113 Identities=12% Similarity=-0.004 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHcc----CHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCC--CcH
Q psy11688 33 ERAEKLKAEANEHFKNQ----AYNKAIELYSAAIEVNPTAIYYANRSFAYLK----TEAIGYALNDASKAIELDQ--TYT 102 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g----~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~----~g~~~~Al~~~~~al~l~p--~~~ 102 (546)
..+.+++++|..+.. + ++++|+.+|++|++.. ++.+++++|.+|.. .+++++|+.++++|++.+| +++
T Consensus 48 g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~ 125 (212)
T 3rjv_A 48 GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVEAG-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAV 125 (212)
T ss_dssp TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHH
T ss_pred CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchH
Confidence 346788889999888 7 9999999999997642 58999999999998 8999999999999999998 569
Q ss_pred HHHHHHHHHHHH----hcChHHHHHHHHHhhccCCCCcchhcccccchhh
Q psy11688 103 KAYYRRAAAYMS----LGKFKLALRDYEAVHKARPNDKDAKAKFTECNKI 148 (546)
Q Consensus 103 ~a~~~lg~~~~~----~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~ 148 (546)
.+++++|.+|.. .+++++|+.+|++++++ |.++.+...++.++..
T Consensus 126 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 126 DAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQ 174 (212)
T ss_dssp HHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHc
Confidence 999999999999 89999999999999998 7777888888887753
No 204
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.75 E-value=2.3e-08 Score=84.39 Aligned_cols=85 Identities=20% Similarity=0.153 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCC-------cchhc
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPND-------KDAKA 140 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~-------~~~~~ 140 (546)
+.+++.+|.++...|++++|+..++++++.+|+++.+++.+|.++..+|++++|+..|++++++.|++ ..++.
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999877 66777
Q ss_pred ccccchhhhhhh
Q psy11688 141 KFTECNKIVKRM 152 (546)
Q Consensus 141 ~l~~~~~~l~~~ 152 (546)
.++.++...++.
T Consensus 84 ~la~~~~~~~~~ 95 (131)
T 1elr_A 84 RIGNSYFKEEKY 95 (131)
T ss_dssp HHHHHHHHTTCH
T ss_pred HHHHHHHHhccH
Confidence 777777666655
No 205
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.73 E-value=3.4e-08 Score=82.69 Aligned_cols=87 Identities=9% Similarity=0.043 Sum_probs=73.5
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc--HHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY--TKAYY 106 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~--~~a~~ 106 (546)
.+|+.+..++.+|..++..|++++|+..|+++++++|+ ..+|+++|.++..+|++++|+..++++++++|+. ..+..
T Consensus 14 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 93 (115)
T 2kat_A 14 QGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVK 93 (115)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHH
Confidence 34556789999999999999999999999999999996 8999999999999999999999999999999853 44444
Q ss_pred HHHHHHHHhc
Q psy11688 107 RRAAAYMSLG 116 (546)
Q Consensus 107 ~lg~~~~~~g 116 (546)
.+...+..++
T Consensus 94 ~l~~~l~~l~ 103 (115)
T 2kat_A 94 ELQVFLRRLA 103 (115)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 4544444443
No 206
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.71 E-value=5.3e-08 Score=103.40 Aligned_cols=119 Identities=12% Similarity=0.049 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CC
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP-----T----AIYYANRSFAYLKTEAIGYALNDASKAIEL-----DQ 99 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p-----~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l-----~p 99 (546)
.+....+++..+..+|+|++|+..|++++++.- + +..+.|+|.+|..+|+|++|+..+++++++ .|
T Consensus 308 ~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~ 387 (490)
T 3n71_A 308 FSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHH 387 (490)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCC
Confidence 355566777788899999999999999998632 2 788999999999999999999999999976 34
Q ss_pred Cc---HHHHHHHHHHHHHhcChHHHHHHHHHhhcc-----CCCCcchh---cccccchhhhhhh
Q psy11688 100 TY---TKAYYRRAAAYMSLGKFKLALRDYEAVHKA-----RPNDKDAK---AKFTECNKIVKRM 152 (546)
Q Consensus 100 ~~---~~a~~~lg~~~~~~g~~~eA~~~~~kal~l-----~P~~~~~~---~~l~~~~~~l~~~ 152 (546)
++ ...+.++|.+|..+|++++|+..|++|+++ .|+.+.+. ..++.++..++.+
T Consensus 388 ~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~ 451 (490)
T 3n71_A 388 NNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMF 451 (490)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHH
Confidence 54 457999999999999999999999999975 56666554 3444444444444
No 207
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.69 E-value=1.9e-07 Score=86.35 Aligned_cols=64 Identities=17% Similarity=0.240 Sum_probs=49.8
Q ss_pred ccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchh
Q psy11688 190 KFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYM 263 (546)
Q Consensus 190 ~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~ 263 (546)
++.+++|+||+...+.++++..... ..+.++++||+++. +++..+.++ +..+++++||||....
T Consensus 27 ~i~~iSD~Hg~~~~l~~~l~~~~~~-~~D~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~ 90 (190)
T 1s3l_A 27 KIGIMSDTHDHLPNIRKAIEIFNDE-NVETVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC 90 (190)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHS-CCSEEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred EEEEEeeCCCCHHHHHHHHHHHhhc-CCCEEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence 4899999999999999988876422 35679999999974 566665543 3479999999998654
No 208
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.69 E-value=5.1e-08 Score=85.74 Aligned_cols=94 Identities=10% Similarity=0.103 Sum_probs=82.7
Q ss_pred CHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhC-C-CcHHHHHHHHHHHHHhcChHHHHH
Q psy11688 50 AYNKAIELYSAAIEVNP-TAIYYANRSFAYLKTE---AIGYALNDASKAIELD-Q-TYTKAYYRRAAAYMSLGKFKLALR 123 (546)
Q Consensus 50 ~~~~Ai~~~~~al~~~p-~~~a~~nla~~~~~~g---~~~~Al~~~~~al~l~-p-~~~~a~~~lg~~~~~~g~~~eA~~ 123 (546)
....+.+.|.++++.+| +..+.+++|.++.+.+ +.++|+..++.+++.+ | ++.+++|++|..++++++|++|++
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 34567778888888777 6999999999999988 7779999999999999 7 678999999999999999999999
Q ss_pred HHHHhhccCCCCcchhcccc
Q psy11688 124 DYEAVHKARPNDKDAKAKFT 143 (546)
Q Consensus 124 ~~~kal~l~P~~~~~~~~l~ 143 (546)
+++++++++|++..+.....
T Consensus 93 y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 93 YVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHH
Confidence 99999999999888764433
No 209
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.68 E-value=4.3e-08 Score=90.02 Aligned_cols=158 Identities=11% Similarity=-0.006 Sum_probs=105.9
Q ss_pred HHHccCHHHHHHHHHHHHHhCC-C-HHHHHHHHHHHHHccCHHHHHHHHHHHHH------hCCCcHHHHHHHHHHHHHhc
Q psy11688 45 HFKNQAYNKAIELYSAAIEVNP-T-AIYYANRSFAYLKTEAIGYALNDASKAIE------LDQTYTKAYYRRAAAYMSLG 116 (546)
Q Consensus 45 ~~~~g~~~~Ai~~~~~al~~~p-~-~~a~~nla~~~~~~g~~~~Al~~~~~al~------l~p~~~~a~~~lg~~~~~~g 116 (546)
++..|+|++|.+.++... .+| . ..++.++|.++...|++++|+..++++++ ..|....++..+|.++..+|
T Consensus 2 ~~~~g~~~~A~~~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 80 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALL-AHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAG 80 (203)
T ss_dssp -----CHHHHHHHHHHHH-TSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcC
Confidence 467899999999655443 366 3 88999999999999999999999999999 45567788999999999999
Q ss_pred ChHHHHHHHHHhhcc---CCCC----cchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhcCCcccc---cccc
Q psy11688 117 KFKLALRDYEAVHKA---RPND----KDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVH---ITVE 186 (546)
Q Consensus 117 ~~~eA~~~~~kal~l---~P~~----~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~~p~~~~---i~~~ 186 (546)
++++|++.+++++++ .+++ ..++..++.++...+++ ..+...++++.++....+.... ....
T Consensus 81 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~--------~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 152 (203)
T 3gw4_A 81 NWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDL--------AGARQEYEKSLVYAQQADDQVAIACAFRG 152 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCH--------HHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCH--------HHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 999999999999998 3422 33566677777666665 3344444444444333322111 0111
Q ss_pred cccccccccccchhHhhHHHHHHHh
Q psy11688 187 DEAKFTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 187 ~~~~~~viGDihg~~~~l~~il~~~ 211 (546)
.+......|+...+...+.++++..
T Consensus 153 la~~~~~~g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 153 LGDLAQQEKNLLEAQQHWLRARDIF 177 (203)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 2223444566666666666665543
No 210
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.63 E-value=5.5e-08 Score=95.12 Aligned_cols=118 Identities=13% Similarity=0.043 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHH
Q psy11688 36 EKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTY--TKAYYRRAAAYM 113 (546)
Q Consensus 36 ~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~--~~a~~~lg~~~~ 113 (546)
+.....+..+...|+|++|.+.|+.++...|+..+.+.+|.++++.++|++|+..++++++..+.. ..+++.+|.++.
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~ 182 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA 182 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH
Confidence 344667899999999999999999999999964499999999999999999999999887764222 458999999999
Q ss_pred HhcChHHHHHHHHHhhccC--CC-Ccchhcccccchhhhhhhh
Q psy11688 114 SLGKFKLALRDYEAVHKAR--PN-DKDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 114 ~~g~~~eA~~~~~kal~l~--P~-~~~~~~~l~~~~~~l~~~~ 153 (546)
.+|++++|+++|++++... |. ..+++..++.++..+++.+
T Consensus 183 ~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~d 225 (282)
T 4f3v_A 183 NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNES 225 (282)
T ss_dssp HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHH
T ss_pred HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHH
Confidence 9999999999999998654 55 5668888999998888763
No 211
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.61 E-value=1.9e-07 Score=75.68 Aligned_cols=73 Identities=15% Similarity=0.061 Sum_probs=66.2
Q ss_pred CC-CHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcc
Q psy11688 65 NP-TAIYYANRSFAYLKTEA---IGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKD 137 (546)
Q Consensus 65 ~p-~~~a~~nla~~~~~~g~---~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~ 137 (546)
+| ++.++..+|.+++..++ .++|.+.+++|+++||+++.+++.+|..++..|+|++|+..|+++++.+|.++.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 45 58999999999987766 799999999999999999999999999999999999999999999999998433
No 212
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.58 E-value=2.3e-07 Score=94.34 Aligned_cols=173 Identities=11% Similarity=-0.027 Sum_probs=120.3
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc---
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT------AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY--- 101 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~------~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~--- 101 (546)
..-.++.+...|..++..|++++|+..+++++...|. ..++.++|.++...|++++|++.+++++++.|..
T Consensus 10 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 89 (373)
T 1hz4_A 10 DTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW 89 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcH
Confidence 3445678889999999999999999999999998873 2478999999999999999999999999986543
Q ss_pred ---HHHHHHHHHHHHHhcChHHHHHHHHHhhccCCC--------CcchhcccccchhhhhhhhhhhhchHHHHHHHHHHH
Q psy11688 102 ---TKAYYRRAAAYMSLGKFKLALRDYEAVHKARPN--------DKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDI 170 (546)
Q Consensus 102 ---~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~--------~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a 170 (546)
..++..+|.++..+|++++|++.|++++++.+. ...++..++.++...+++ ..+...+.++
T Consensus 90 ~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~--------~~A~~~~~~a 161 (373)
T 1hz4_A 90 HYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARL--------DEAEASARSG 161 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCH--------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCH--------HHHHHHHHHH
Confidence 234788999999999999999999999987532 233445566666555555 3344444444
Q ss_pred HhhhhcCCc--ccccccccccccccccccchhHhhHHHHHHHh
Q psy11688 171 KALFMTQDS--LVHITVEDEAKFTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 171 ~eiL~~~p~--~~~i~~~~~~~~~viGDihg~~~~l~~il~~~ 211 (546)
.++...... ........+......|+...+...+.+++...
T Consensus 162 l~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 162 IEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp HHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 444332211 11111111222344566666666666666553
No 213
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=98.56 E-value=3.6e-07 Score=86.41 Aligned_cols=71 Identities=8% Similarity=0.028 Sum_probs=52.5
Q ss_pred ccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccch
Q psy11688 190 KFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAY 262 (546)
Q Consensus 190 ~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~ 262 (546)
++.+++|+|+....+.++++..... ..+.++++||++++|....++..++..++.. +..+++++||||...
T Consensus 7 ri~~iSD~H~~~~~~~~~~~~~~~~-~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~-~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 7 YILATSNPMGDLEALEKFVKLAPDT-GADAIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQDAPI 77 (228)
T ss_dssp EEEEEECCTTCHHHHHHHHTHHHHH-TCSEEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTTSCSH
T ss_pred EEEEEeeccCCHHHHHHHHHHHhhc-CCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEECCCCCchh
Confidence 4889999999998888887765321 3467999999999997666555555555432 335999999999864
No 214
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.55 E-value=4.8e-07 Score=91.91 Aligned_cols=134 Identities=11% Similarity=0.037 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP---T----AIYYANRSFAYLKTEAIGYALNDASKAIELD------- 98 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p---~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~------- 98 (546)
..+..+..+|..+...|++++|+..+++++++.| + ..++.++|.++...|++++|++.+++++++.
T Consensus 51 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~ 130 (373)
T 1hz4_A 51 SRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ 130 (373)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhcccc
Confidence 4566788999999999999999999999999766 2 4568899999999999999999999999875
Q ss_pred -CCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcc-----hhcccccchhhhhhhhhhhhchHHHHHHHHHHHHh
Q psy11688 99 -QTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKD-----AKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKA 172 (546)
Q Consensus 99 -p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~-----~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~e 172 (546)
|....++..+|.++...|++++|...+++++++.|.... ++..++.++...++. ..+...++++.+
T Consensus 131 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~--------~~A~~~l~~a~~ 202 (373)
T 1hz4_A 131 LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDL--------DNARSQLNRLEN 202 (373)
T ss_dssp STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCH--------HHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCH--------HHHHHHHHHHHH
Confidence 445678889999999999999999999999999886432 233444444444443 334445555544
Q ss_pred hh
Q psy11688 173 LF 174 (546)
Q Consensus 173 iL 174 (546)
+.
T Consensus 203 ~~ 204 (373)
T 1hz4_A 203 LL 204 (373)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 215
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=98.53 E-value=1.3e-08 Score=99.34 Aligned_cols=77 Identities=14% Similarity=0.102 Sum_probs=58.4
Q ss_pred hhhhhhhhHhhCcchhhhHHHHHHHHHHhcCCCCC-cceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC---
Q psy11688 452 MTDLMQTYKAQGKLHRKYAYRILMDIKKKKILNLD-FTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC--- 527 (546)
Q Consensus 452 l~~l~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh--- 527 (546)
+..|...+...+|+||++ ..|.++++.....+. ..+||+|||||||+.|.||+.+|..+ .++++||||
T Consensus 14 l~~~~~~i~visDiHg~~--~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~~------~~~~v~GNHd~~ 85 (262)
T 2qjc_A 14 LPNVTGRVIIVGDIHGCR--AQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL------GAYSVLGNHDAK 85 (262)
T ss_dssp CTTCCSCEEEECCCTTCH--HHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHHHHHHHHHHH------TCEECCCHHHHH
T ss_pred hcCCCCeEEEEeCCCCCH--HHHHHHHHHHhccCCCCEEEEecCCCCCCCCHHHHHHHHHHC------CCEEEeCcChHH
Confidence 334444567899999984 558888877665544 78999999999999999999988764 389999999
Q ss_pred -cccccchhh
Q psy11688 528 -IFTLFGFKL 536 (546)
Q Consensus 528 -~~~~~gf~~ 536 (546)
++..+||..
T Consensus 86 ~~~~~~~~~~ 95 (262)
T 2qjc_A 86 LLKLVKKLGK 95 (262)
T ss_dssp HHHHHHCC--
T ss_pred HHhhhcCCCc
Confidence 444556544
No 216
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=98.51 E-value=5.6e-07 Score=84.93 Aligned_cols=118 Identities=19% Similarity=0.329 Sum_probs=80.6
Q ss_pred ccccccccchhH------hhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchh
Q psy11688 190 KFTVCGDIHGQF------YDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYM 263 (546)
Q Consensus 190 ~~~viGDihg~~------~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~ 263 (546)
++.+++|+|+.. ..+.++++ ....+.++++||+++ .++++.+.++. ..+++++||||....
T Consensus 27 ~i~~iSD~H~~~~~~~l~~~l~~~~~----~~~~D~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~GNHD~~~~ 93 (215)
T 2a22_A 27 LVLLIGDLKIPYGAKELPSNFRELLA----TDKINYVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSGDLDSAIF 93 (215)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHH----CTTCCEEEECSCCCC-----HHHHHHHHHHC----SCEEECCCTTCCSCC
T ss_pred EEEEEecCCCCCChHHHHHHHHHHHh----cCCCCEEEECCCCCC-----HHHHHHHHHcC----CCEEEecCCCcCccc
Confidence 589999999865 23344443 224567999999997 57777776653 359999999998654
Q ss_pred hhhhcchhhhhhhchHHHHHHHHHhhccccceeee---cceEEEEeCCccCCCCCChhhhhccCCCCCCCCchhhhhhhc
Q psy11688 264 NQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCI---NNKVLVMHGGLFSSDNVTLEDIRTIDRNRQPPDEGLMCELLW 340 (546)
Q Consensus 264 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~lP~~~~~---~~~~~~vHgGi~~~~~~~~~~i~~~~r~~~~~~~~~~~dllW 340 (546)
.. . .+++..+|....+ +.+++++||.+..+ |
T Consensus 94 ~~----~---------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~~~---------------------------~ 127 (215)
T 2a22_A 94 NP----D---------------PESNGVFPEYVVVQIGEFKIGLMHGNQVLP---------------------------W 127 (215)
T ss_dssp BC----C---------------GGGTBCCCSEEEEEETTEEEEEECSTTSSS---------------------------T
T ss_pred cc----C---------------hhhHhhCCceEEEecCCeEEEEEcCCccCC---------------------------C
Confidence 31 0 0245667765433 34899999876110 1
Q ss_pred CCCCCCCCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEEEeccccc
Q psy11688 341 SDPQIPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVKQ 385 (546)
Q Consensus 341 sdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~ 385 (546)
.+.+.+.++++..+.++++-||.-..
T Consensus 128 -------------------~~~~~l~~~~~~~~~d~vl~GHtH~~ 153 (215)
T 2a22_A 128 -------------------DDPGSLEQWQRRLDCDILVTGHTHKL 153 (215)
T ss_dssp -------------------TCHHHHHHHHHHHTCSEEEECSSCCC
T ss_pred -------------------CCHHHHHHHHhhcCCCEEEECCcCCC
Confidence 03456777777889999999998754
No 217
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.50 E-value=7.3e-07 Score=77.69 Aligned_cols=89 Identities=15% Similarity=0.001 Sum_probs=80.6
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH--
Q psy11688 41 EANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLK----TEAIGYALNDASKAIELDQTYTKAYYRRAAAYMS-- 114 (546)
Q Consensus 41 ~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~----~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~-- 114 (546)
+|..+...+..++|+.+|++|.+. .++.+++++|.+|.. .+++++|+.++++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~-g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~ 107 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL-NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGK 107 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC-CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCC
Confidence 677777778889999999999986 468999999999999 89999999999999987 689999999999999
Q ss_pred --hcChHHHHHHHHHhhccC
Q psy11688 115 --LGKFKLALRDYEAVHKAR 132 (546)
Q Consensus 115 --~g~~~eA~~~~~kal~l~ 132 (546)
.+++++|+++|++|.+..
T Consensus 108 g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 108 GVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp SSCCCHHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHCC
Confidence 999999999999999874
No 218
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.50 E-value=5.8e-07 Score=74.27 Aligned_cols=75 Identities=17% Similarity=0.083 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------C-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVN-------P-TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYY 106 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~-------p-~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~ 106 (546)
++..+..|..+++.++|+.|+..|++|++.. + ...++.++|.++.++|++++|+..++++++++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4566889999999999999999999999863 1 2788999999999999999999999999999999988877
Q ss_pred HHH
Q psy11688 107 RRA 109 (546)
Q Consensus 107 ~lg 109 (546)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 776
No 219
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.49 E-value=8.3e-07 Score=94.19 Aligned_cols=106 Identities=15% Similarity=0.035 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHcc---CHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy11688 37 KLKAEANEHFKNQ---AYNKAIELYSAAIEVNPTAIYYANRSFAYLK----TEAIGYALNDASKAIELDQTYTKAYYRRA 109 (546)
Q Consensus 37 ~~~~~g~~~~~~g---~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~----~g~~~~Al~~~~~al~l~p~~~~a~~~lg 109 (546)
+++.+|..+...| ++++|+.+|++|++. .++.+++++|.+|.. .+++++|+.++++|++.. ++.+++++|
T Consensus 330 a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~-~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg 406 (490)
T 2xm6_A 330 AQANLGAIYFRLGSEEEHKKAVEWFRKAAAK-GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLG 406 (490)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccHHHHHHHHHHHHHC-CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHH
Confidence 3444444444433 455555555555544 235555555555555 455555555555555542 355555555
Q ss_pred HHHHH----hcChHHHHHHHHHhhccCCC---Ccchhcccccc
Q psy11688 110 AAYMS----LGKFKLALRDYEAVHKARPN---DKDAKAKFTEC 145 (546)
Q Consensus 110 ~~~~~----~g~~~eA~~~~~kal~l~P~---~~~~~~~l~~~ 145 (546)
.+|.. .+++++|+.+|++|++.+|+ ++.+...++.+
T Consensus 407 ~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~~~ 449 (490)
T 2xm6_A 407 EIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKL 449 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTTS
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHHhc
Confidence 55555 55555555555555555532 44444444443
No 220
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.49 E-value=4.8e-07 Score=74.76 Aligned_cols=79 Identities=11% Similarity=-0.077 Sum_probs=70.3
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------CCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchh
Q psy11688 67 TAIYYANRSFAYLKTEAIGYALNDASKAIELD-------QTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAK 139 (546)
Q Consensus 67 ~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~-------p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~ 139 (546)
++.-.+.+|..++..++|+.|+.++++|++.. +.....+..+|.|+.++|++++|+..++++++++|++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 35667899999999999999999999999873 45688899999999999999999999999999999998887
Q ss_pred cccccc
Q psy11688 140 AKFTEC 145 (546)
Q Consensus 140 ~~l~~~ 145 (546)
.+++..
T Consensus 84 ~n~~~~ 89 (104)
T 2v5f_A 84 GNLKYF 89 (104)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 666533
No 221
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.48 E-value=4.9e-07 Score=95.96 Aligned_cols=113 Identities=10% Similarity=0.033 Sum_probs=100.7
Q ss_pred hHHHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCcH
Q psy11688 31 DKERAEKLKAEANEHFK----NQAYNKAIELYSAAIEVNPTAIYYANRSFAYLK----TEAIGYALNDASKAIELDQTYT 102 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~----~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~----~g~~~~Al~~~~~al~l~p~~~ 102 (546)
++.++++++.+|..++. .+++++|+..|++|++. .++.+++.+|.+|.. .+++++|+++|+++.+. +++
T Consensus 35 ~~g~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~-~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 111 (490)
T 2xm6_A 35 ESGEAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ-GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLP 111 (490)
T ss_dssp HTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred HCCCHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 34567889999999999 99999999999999986 468999999999999 99999999999999886 588
Q ss_pred HHHHHHHHHHHH----hcChHHHHHHHHHhhccCCCCcchhcccccchhh
Q psy11688 103 KAYYRRAAAYMS----LGKFKLALRDYEAVHKARPNDKDAKAKFTECNKI 148 (546)
Q Consensus 103 ~a~~~lg~~~~~----~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~ 148 (546)
.+++.+|.+|.. .+++++|+++|+++.+. +++.++..++.++..
T Consensus 112 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~ 159 (490)
T 2xm6_A 112 QAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFE 159 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHc
Confidence 999999999999 89999999999999875 577888888877753
No 222
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.46 E-value=7.8e-07 Score=81.28 Aligned_cols=84 Identities=21% Similarity=0.287 Sum_probs=61.5
Q ss_pred ccccccccch--hHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhh
Q psy11688 190 KFTVCGDIHG--QFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIY 267 (546)
Q Consensus 190 ~~~viGDihg--~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 267 (546)
++.+++|+|| +...+.++++... ...+.++++||++++ ++++.+..+. ..+++++||||...
T Consensus 24 ri~~iSD~Hg~~~~~~l~~~l~~~~--~~~D~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~~----- 87 (178)
T 2kkn_A 24 RFLLISDSHVPVRMASLPDEILNSL--KEYDGVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYPD----- 87 (178)
T ss_dssp EEEEECCCCBTTTTCCCCHHHHHGG--GGCSEEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCGG-----
T ss_pred EEEEEecccCCCCHHHHHHHHHHHh--cCCCEEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcHH-----
Confidence 4889999997 6677777777643 345679999999984 7777777653 35999999999752
Q ss_pred cchhhhhhhchHHHHHHHHHhhccccceeee---cceEEEEeCCc
Q psy11688 268 GFEGEVKSKYTDLMAQFFTEVYNWLPLCHCI---NNKVLVMHGGL 309 (546)
Q Consensus 268 ~~~~e~~~~~~~~~~~~~~~~~~~lP~~~~~---~~~~~~vHgGi 309 (546)
++..+|....+ +.+++++||..
T Consensus 88 --------------------~~~~lp~~~~~~~~g~~i~l~HG~~ 112 (178)
T 2kkn_A 88 --------------------VKEHLPFSKVLLVEGVTIGMCHGWG 112 (178)
T ss_dssp --------------------GGGTSCSCEEEEETTEEEEECCSCC
T ss_pred --------------------HHhhCCcceEEEECCEEEEEECCCC
Confidence 23446654433 45899999975
No 223
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.45 E-value=5.5e-07 Score=94.07 Aligned_cols=95 Identities=12% Similarity=0.033 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCc-
Q psy11688 37 KLKAEANEHFKNQAYNKAIELYSAAIEV-----NPT----AIYYANRSFAYLKTEAIGYALNDASKAIEL-----DQTY- 101 (546)
Q Consensus 37 ~~~~~g~~~~~~g~~~~Ai~~~~~al~~-----~p~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l-----~p~~- 101 (546)
...+.+......|+|++|+..|++++++ -|+ +..+.|+|.+|..+|+|++|+..+++++++ .|++
T Consensus 300 ~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 379 (433)
T 3qww_A 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSL 379 (433)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 3344445555678999999999999985 232 688999999999999999999999999976 3444
Q ss_pred --HHHHHHHHHHHHHhcChHHHHHHHHHhhcc
Q psy11688 102 --TKAYYRRAAAYMSLGKFKLALRDYEAVHKA 131 (546)
Q Consensus 102 --~~a~~~lg~~~~~~g~~~eA~~~~~kal~l 131 (546)
...+.++|.+|..+|++++|+..|++|+++
T Consensus 380 ~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 380 NVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 456999999999999999999999999876
No 224
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.41 E-value=1.9e-06 Score=89.94 Aligned_cols=107 Identities=10% Similarity=0.077 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----C
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP-----T----AIYYANRSFAYLKTEAIGYALNDASKAIEL-----D 98 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p-----~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l-----~ 98 (546)
..++........+.++|+|++|+..|++++++.- + ...+.++|.+|..+|+|++|+..+++++++ .
T Consensus 285 ~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg 364 (429)
T 3qwp_A 285 KEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFP 364 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcC
Confidence 3455666667778899999999999999998632 2 688999999999999999999999999965 3
Q ss_pred CCcH---HHHHHHHHHHHHhcChHHHHHHHHHhhcc-----CCCCcchh
Q psy11688 99 QTYT---KAYYRRAAAYMSLGKFKLALRDYEAVHKA-----RPNDKDAK 139 (546)
Q Consensus 99 p~~~---~a~~~lg~~~~~~g~~~eA~~~~~kal~l-----~P~~~~~~ 139 (546)
|+++ ..++++|.+|..+|++++|+..|++|+++ .|+++.+.
T Consensus 365 ~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 413 (429)
T 3qwp_A 365 GSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIE 413 (429)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHH
T ss_pred CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHH
Confidence 4544 56999999999999999999999999875 45555543
No 225
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=98.41 E-value=3e-06 Score=78.28 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=75.1
Q ss_pred ccccccccchhHh--hHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhh
Q psy11688 190 KFTVCGDIHGQFY--DLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIY 267 (546)
Q Consensus 190 ~~~viGDihg~~~--~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 267 (546)
++.+++|+|+... .+.+.+...-.....+.++++||+++ .+++..+..+. ..+++++||||...
T Consensus 12 ~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~~~----- 77 (192)
T 1z2w_A 12 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDENL----- 77 (192)
T ss_dssp EEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCCCT-----
T ss_pred EEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCccc-----
Confidence 4789999998642 23333333211234577999999997 57777776653 36999999999764
Q ss_pred cchhhhhhhchHHHHHHHHHhhccccceeee---cceEEEEeCCccCCCCCChhhhhccCCCCCCCCchhhhhhhcCCCC
Q psy11688 268 GFEGEVKSKYTDLMAQFFTEVYNWLPLCHCI---NNKVLVMHGGLFSSDNVTLEDIRTIDRNRQPPDEGLMCELLWSDPQ 344 (546)
Q Consensus 268 ~~~~e~~~~~~~~~~~~~~~~~~~lP~~~~~---~~~~~~vHgGi~~~~~~~~~~i~~~~r~~~~~~~~~~~dllWsdp~ 344 (546)
.+|....+ +.+++++||.+..+ |.
T Consensus 78 -----------------------~lp~~~~~~~~~~~i~l~Hg~~~~~---------------------------~~--- 104 (192)
T 1z2w_A 78 -----------------------NYPEQKVVTVGQFKIGLIHGHQVIP---------------------------WG--- 104 (192)
T ss_dssp -----------------------TSCSEEEEEETTEEEEEECSCCCCB---------------------------TT---
T ss_pred -----------------------cCCcceEEEECCEEEEEECCCcCCC---------------------------CC---
Confidence 24433322 34799999876110 10
Q ss_pred CCCCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEEEeccccc
Q psy11688 345 IPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVKQ 385 (546)
Q Consensus 345 ~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~ 385 (546)
+.+.+.++++..+.++++-||.-..
T Consensus 105 ----------------~~~~l~~~~~~~~~d~vi~GHtH~~ 129 (192)
T 1z2w_A 105 ----------------DMASLALLQRQFDVDILISGHTHKF 129 (192)
T ss_dssp ----------------CHHHHHHHHHHHSSSEEECCSSCCC
T ss_pred ----------------CHHHHHHHHHhcCCCEEEECCcCcC
Confidence 2355667777789999999998754
No 226
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.38 E-value=2.5e-06 Score=86.08 Aligned_cols=101 Identities=17% Similarity=0.191 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhCCC-HHHHHHHHHHH--------------------------------
Q psy11688 35 AEKLKAEANEHFKNQ---AYNKAIELYSAAIEVNPT-AIYYANRSFAY-------------------------------- 78 (546)
Q Consensus 35 a~~~~~~g~~~~~~g---~~~~Ai~~~~~al~~~p~-~~a~~nla~~~-------------------------------- 78 (546)
+..++.+|..++.++ +..+|+.+|++|++++|+ +.+|..++.+|
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~ 275 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN 275 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCc
Confidence 455677888887654 458899999999999996 55555544444
Q ss_pred ------------HHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCc
Q psy11688 79 ------------LKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDK 136 (546)
Q Consensus 79 ------------~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~ 136 (546)
...|++++|++.+++|++++|+ ..+|..+|.++...|++++|++.|++|+.++|..+
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 3457777777777777777753 45666777777777777777777777777777654
No 227
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.38 E-value=4.4e-07 Score=85.15 Aligned_cols=68 Identities=22% Similarity=0.326 Sum_probs=55.4
Q ss_pred ccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCC--------ChHHHHHHHhhhhhcCCCeEEEEccccccc
Q psy11688 190 KFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGS--------FSVECIFTLFGFKLLYPNHFFMARGNHESA 261 (546)
Q Consensus 190 ~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~--------~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 261 (546)
++.+++|+|++...+.++++..... ..+.++++||++++|+ .+.+++..+.++. ..+++++||||..
T Consensus 27 ki~~iSD~H~~~~~l~~~l~~~~~~-~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNHD~~ 101 (208)
T 1su1_A 27 KLMFASDIHGSLPATERVLELFAQS-GAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVRGNCDSE 101 (208)
T ss_dssp EEEEECCCTTBHHHHHHHHHHHHHH-TCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECCCTTCCH
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHhc-CCCEEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEECCCchH
Confidence 4889999999999998888875322 3467999999999998 3688888888765 3699999999986
Q ss_pred h
Q psy11688 262 Y 262 (546)
Q Consensus 262 ~ 262 (546)
.
T Consensus 102 ~ 102 (208)
T 1su1_A 102 V 102 (208)
T ss_dssp H
T ss_pred H
Confidence 5
No 228
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=98.37 E-value=6.1e-06 Score=75.05 Aligned_cols=108 Identities=16% Similarity=0.107 Sum_probs=75.3
Q ss_pred ccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEccccccchhhhhhcc
Q psy11688 190 KFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYGF 269 (546)
Q Consensus 190 ~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~ 269 (546)
++.+++|+||+...+.++++.... ..+.++++||+.. ++ +..+. ..+++++||||....
T Consensus 8 ~i~~isD~H~~~~~~~~~~~~~~~--~~d~i~~~GD~~~------~~---l~~l~----~~~~~v~GNhD~~~~------ 66 (176)
T 3ck2_A 8 TIIVMSDSHGDSLIVEEVRDRYVG--KVDAVFHNGDSEL------RP---DSPLW----EGIRVVKGNMDFYAG------ 66 (176)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHTT--TSSEEEECSCCCS------CT---TCGGG----TTEEECCCTTCCSTT------
T ss_pred EEEEEecCCCCHHHHHHHHHHhhc--CCCEEEECCCCch------HH---HHhhh----CCeEEecCcccchhc------
Confidence 488999999999999999998753 4567999999721 12 22222 259999999997531
Q ss_pred hhhhhhhchHHHHHHHHHhhccccce--eee-cceEEEEeCCccCCCCCChhhhhccCCCCCCCCchhhhhhhcCCCCCC
Q psy11688 270 EGEVKSKYTDLMAQFFTEVYNWLPLC--HCI-NNKVLVMHGGLFSSDNVTLEDIRTIDRNRQPPDEGLMCELLWSDPQIP 346 (546)
Q Consensus 270 ~~e~~~~~~~~~~~~~~~~~~~lP~~--~~~-~~~~~~vHgGi~~~~~~~~~~i~~~~r~~~~~~~~~~~dllWsdp~~~ 346 (546)
+|.. ..+ +.+++++||.+..+ |
T Consensus 67 ----------------------~p~~~~~~~~~~~i~~~Hg~~~~~---------------------------~------ 91 (176)
T 3ck2_A 67 ----------------------YPERLVTELGSTKIIQTHGHLFDI---------------------------N------ 91 (176)
T ss_dssp ----------------------CCSEEEEEETTEEEEEECSGGGTT---------------------------T------
T ss_pred ----------------------CCcEEEEEECCeEEEEECCCccCC---------------------------C------
Confidence 2221 122 45899999987210 0
Q ss_pred CCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEEEecccccc
Q psy11688 347 NGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVKQD 386 (546)
Q Consensus 347 ~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~ 386 (546)
.+.+.+.++++..++++++-||+-.+.
T Consensus 92 -------------~~~~~l~~~~~~~~~d~vi~GHtH~~~ 118 (176)
T 3ck2_A 92 -------------FNFQKLDYWAQEEEAAICLYGHLHVPS 118 (176)
T ss_dssp -------------TCSHHHHHHHHHTTCSEEECCSSCCEE
T ss_pred -------------CCHHHHHHHHHhcCCCEEEECCcCCCC
Confidence 133567788888999999999998654
No 229
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.36 E-value=9.7e-07 Score=93.71 Aligned_cols=105 Identities=13% Similarity=0.035 Sum_probs=92.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVN-----PT----AIYYANRSFAYLKTEAIGYALNDASKAIEL- 97 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~-----p~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l- 97 (546)
-.+.|.-+..+.++|..|..+|+|++|+.+|++++++. |+ +..+.|+|.+|..+|+|++|+..+++|+++
T Consensus 344 g~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 344 ADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAIL 423 (490)
T ss_dssp CTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999862 22 788999999999999999999999999975
Q ss_pred ----CCCcHH---HHHHHHHHHHHhcChHHHHHHHHHhhccC
Q psy11688 98 ----DQTYTK---AYYRRAAAYMSLGKFKLALRDYEAVHKAR 132 (546)
Q Consensus 98 ----~p~~~~---a~~~lg~~~~~~g~~~eA~~~~~kal~l~ 132 (546)
.|+++. ..-.++.++..++.|++|...|.++.+..
T Consensus 424 ~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 424 LVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466654 56788999999999999999999986543
No 230
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.31 E-value=1.1e-06 Score=92.43 Aligned_cols=106 Identities=13% Similarity=0.036 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHcc---CHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHc----cCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 37 KLKAEANEHFKNQ---AYNKAIELYSAAIEVNPT-AIYYANRSFAYLKT----EAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 37 ~~~~~g~~~~~~g---~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~----g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
+++.+|..+.+.| ++++|+..|+++.+..|. +..++++|.+|... +++++|+.+|+++. |+++.+++++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~L 254 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHH
Confidence 6677888888888 888888888888888774 77778888888665 68888888888887 8888888888
Q ss_pred HHH-H--HHhcChHHHHHHHHHhhccCCCCcchhcccccchh
Q psy11688 109 AAA-Y--MSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 109 g~~-~--~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
|.+ + ...+++++|+++|+++.+. .++.+...++.++.
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY 294 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 888 4 4678888888888888754 46777777777765
No 231
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.29 E-value=2.6e-06 Score=82.61 Aligned_cols=107 Identities=9% Similarity=-0.020 Sum_probs=89.9
Q ss_pred hhhHHHHHHHHHHHHHHHH-----cc------CHHHHHHHHHHHHHhCCC---HHHHHHHHHHHHHc-----cCHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFK-----NQ------AYNKAIELYSAAIEVNPT---AIYYANRSFAYLKT-----EAIGYALN 89 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~-----~g------~~~~Ai~~~~~al~~~p~---~~a~~nla~~~~~~-----g~~~~Al~ 89 (546)
.-++++++.++=.|..... .| ...+|...+++|+++||+ ..+|..+|..|.+. |+.++|.+
T Consensus 146 ~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~ 225 (301)
T 3u64_A 146 RCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHT 225 (301)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHH
T ss_pred HcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHH
Confidence 3345566666555554432 23 357899999999999997 67999999999996 99999999
Q ss_pred HHHHHHHhCCCc-HHHHHHHHHHHHH-hcChHHHHHHHHHhhccCCCC
Q psy11688 90 DASKAIELDQTY-TKAYYRRAAAYMS-LGKFKLALRDYEAVHKARPND 135 (546)
Q Consensus 90 ~~~~al~l~p~~-~~a~~~lg~~~~~-~g~~~eA~~~~~kal~l~P~~ 135 (546)
.|++|++++|+. ..+++..|..+.. .+++++|.+.++++++.+|..
T Consensus 226 ~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 226 AFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 999999999975 9999999999988 599999999999999999874
No 232
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.24 E-value=1.9e-06 Score=69.69 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHH
Q psy11688 31 DKERAEKLKAEANEHFKNQA---YNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTK 103 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~---~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~ 103 (546)
+|++++.+...|.+++..++ .++|...+++|++++|+ ..++..+|..+++.|+|++|+..++++++.+|..++
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 45567889999999976665 79999999999999995 999999999999999999999999999999998433
No 233
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.22 E-value=4.5e-06 Score=72.57 Aligned_cols=94 Identities=20% Similarity=0.105 Sum_probs=82.6
Q ss_pred ccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----hcChHHHHH
Q psy11688 48 NQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMS----LGKFKLALR 123 (546)
Q Consensus 48 ~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~----~g~~~eA~~ 123 (546)
.+++++|+..|++|.+... +.+. +|.+|...+..++|+.+|++|.+. .++.+++++|.+|.. .+++++|++
T Consensus 8 ~~d~~~A~~~~~~aa~~g~-~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~ 82 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNE-MFGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQ 82 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTC-TTHH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCC-Hhhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHH
Confidence 3678999999999998764 2233 999999999999999999999998 689999999999999 899999999
Q ss_pred HHHHhhccCCCCcchhcccccchhh
Q psy11688 124 DYEAVHKARPNDKDAKAKFTECNKI 148 (546)
Q Consensus 124 ~~~kal~l~P~~~~~~~~l~~~~~~ 148 (546)
+|+++.+. .++.+...++.++..
T Consensus 83 ~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 83 YYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcC--CCHHHHHHHHHHHHC
Confidence 99999987 678888888888764
No 234
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.18 E-value=3.7e-06 Score=88.47 Aligned_cols=101 Identities=13% Similarity=0.067 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHc----cCHHHHHHHHHHHHHhCC-CHHHHHHHHHH-H--HHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 37 KLKAEANEHFKN----QAYNKAIELYSAAIEVNP-TAIYYANRSFA-Y--LKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 37 ~~~~~g~~~~~~----g~~~~Ai~~~~~al~~~p-~~~a~~nla~~-~--~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.++++|..+... +++++|+.+|+++. | ++.+++++|.+ + ...+++++|+.+|+++.+.+ ++.+++++
T Consensus 215 ~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~L 289 (452)
T 3e4b_A 215 RVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLL 289 (452)
T ss_dssp HHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHH
Confidence 334455544333 35555555555554 3 34455555554 2 23445555555555554332 45555555
Q ss_pred HHHHHHhc-----ChHHHHHHHHHhhccCCCCcchhcccccch
Q psy11688 109 AAAYMSLG-----KFKLALRDYEAVHKARPNDKDAKAKFTECN 146 (546)
Q Consensus 109 g~~~~~~g-----~~~eA~~~~~kal~l~P~~~~~~~~l~~~~ 146 (546)
|.+|. .| ++++|+++|+++. |.++.+...++.++
T Consensus 290 g~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y 328 (452)
T 3e4b_A 290 GKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIY 328 (452)
T ss_dssp HHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHH
T ss_pred HHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHH
Confidence 55554 33 5555555555554 44455554444444
No 235
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.17 E-value=4.8e-06 Score=77.10 Aligned_cols=136 Identities=13% Similarity=0.059 Sum_probs=83.5
Q ss_pred ccccccccchhHhhH-------------HHHHHHhCC-CCCCCCeeeeccccccCCChHHHHHHHhhhhhcCCCeEEEEc
Q psy11688 190 KFTVCGDIHGQFYDL-------------MNIFELNGL-PSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMAR 255 (546)
Q Consensus 190 ~~~viGDihg~~~~l-------------~~il~~~~~-~~~~~~~~~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~lr 255 (546)
++.+++|+|.....+ .++++.... ....+.++++||++++|+...+++.++..+. ..+++++
T Consensus 3 ~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~----~~~~~v~ 78 (195)
T 1xm7_A 3 MMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALP----GRKILVM 78 (195)
T ss_dssp CEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSS----SEEEEEC
T ss_pred EEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCC----CCEEEEe
Confidence 367899999543321 223332211 2345779999999999877778888877663 3599999
Q ss_pred cccccchhhhhhcchhhhhhhchHHHHHHHHHhhccccceee---e-cceEEEEeCCccCCCCCChhhhhccCCCCCCCC
Q psy11688 256 GNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHC---I-NNKVLVMHGGLFSSDNVTLEDIRTIDRNRQPPD 331 (546)
Q Consensus 256 GNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~lP~~~~---~-~~~~~~vHgGi~~~~~~~~~~i~~~~r~~~~~~ 331 (546)
||||....... ..+..+|-... + +.+++++||-+ .+..
T Consensus 79 GNhD~~~~~~~--------------------~~~~~l~~~~~l~~~~~~~i~~~H~~~-~~~~----------------- 120 (195)
T 1xm7_A 79 GNHDKDKESLK--------------------EYFDEIYDFYKIIEHKGKRILLSHYPA-KDPI----------------- 120 (195)
T ss_dssp CTTCCCHHHHT--------------------TTCSEEESSEEEEEETTEEEEEESSCS-SCSS-----------------
T ss_pred CCCCCchhhhh--------------------hhhhchhHHHHHHhcCCcEEEEEccCC-cCCC-----------------
Confidence 99998543110 01122332222 2 34799999865 2100
Q ss_pred chhhhhhhcCCCCCCCCCCCCCCCCeeeeCHHHHHHHHHhcCCcEEEEeccccccCceE
Q psy11688 332 EGLMCELLWSDPQIPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVKQDGYEV 390 (546)
Q Consensus 332 ~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~G~~~ 390 (546)
+. . +..+.+.+.+.++..+++++|-||+-......+
T Consensus 121 ----------~~-----~--------~~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~~ 156 (195)
T 1xm7_A 121 ----------TE-----R--------YPDRQEMVREIYFKENCDLLIHGHVHWNREGIK 156 (195)
T ss_dssp ----------CC-----S--------CHHHHHHHHHHHHHTTCSEEEECCCCCCSCC--
T ss_pred ----------cc-----c--------ccchHHHHHHHHHHcCCcEEEECCcCCCCcccc
Confidence 00 0 002456788888889999999999987655433
No 236
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=98.15 E-value=8.2e-07 Score=84.07 Aligned_cols=61 Identities=28% Similarity=0.278 Sum_probs=48.4
Q ss_pred hHhhCcchhhhHHHHHHHHHHhcCCC-CCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 459 YKAQGKLHRKYAYRILMDIKKKKILN-LDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 459 f~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
+...+|+||++ ..|.++++..... ..+.+||+||+||||+.|.|++.+|.. ..++++||||
T Consensus 15 i~visDiHg~~--~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNh 76 (221)
T 1g5b_A 15 IWVVGDLHGCY--TNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITF------PWFRAVRGNH 76 (221)
T ss_dssp EEEECCCTTCH--HHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHH
T ss_pred EEEEEcCCCCH--HHHHHHHHHccCCCCCCEEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCc
Confidence 45789999994 4577777776554 346788999999999999999877642 3599999999
No 237
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.15 E-value=7.1e-06 Score=84.73 Aligned_cols=175 Identities=10% Similarity=-0.019 Sum_probs=120.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-------AIYYANRSFAYLKTEAIGYALNDASKAIELD-- 98 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-------~~a~~nla~~~~~~g~~~~Al~~~~~al~l~-- 98 (546)
....+....++.++|..|.+.|++++|++.|.+++...+. ..+..+++.++...|++++|+..+++++...
T Consensus 48 ~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 127 (434)
T 4b4t_Q 48 DKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKR 127 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 3455667788999999999999999999999999987552 3567788999989999999999999999764
Q ss_pred ----CCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCC------CCcchhcccccchhhhhhhhhhhhchHHHHHHHHH
Q psy11688 99 ----QTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARP------NDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILM 168 (546)
Q Consensus 99 ----p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P------~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~ 168 (546)
+.....+.++|.+|...|+|++|...+++++.... ....++..++.++...+++ ..+..++.
T Consensus 128 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~A~~~~~ 199 (434)
T 4b4t_Q 128 EKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNL--------AKSKASLT 199 (434)
T ss_dssp SSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCH--------HHHHHHHH
T ss_pred hCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcH--------HHHHHHHH
Confidence 33467899999999999999999999999886632 2233555666666666555 33444445
Q ss_pred HHHhhhhcCCccccc----ccccccccccccccchhHhhHHHHHHH
Q psy11688 169 DIKALFMTQDSLVHI----TVEDEAKFTVCGDIHGQFYDLMNIFEL 210 (546)
Q Consensus 169 ~a~eiL~~~p~~~~i----~~~~~~~~~viGDihg~~~~l~~il~~ 210 (546)
++..+....+..... ....+......|+...+...+.++++.
T Consensus 200 ~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 200 AARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 554444333321111 111111123345555555555566554
No 238
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=98.11 E-value=8.7e-06 Score=81.51 Aligned_cols=73 Identities=18% Similarity=0.160 Sum_probs=47.4
Q ss_pred cccccccccch------------hHhhHHHHHHHhCC-CCCCCCeeeeccccccCCChH--HHHHHHhhhhhcCCCeEEE
Q psy11688 189 AKFTVCGDIHG------------QFYDLMNIFELNGL-PSPDNPYLFNGDFVDRGSFSV--ECIFTLFGFKLLYPNHFFM 253 (546)
Q Consensus 189 ~~~~viGDihg------------~~~~l~~il~~~~~-~~~~~~~~~lGD~vdrG~~~~--e~l~~l~~l~~~~p~~v~~ 253 (546)
-++.+++|+|. ....+.++++.+.. ....+.++++||+++.|.... .+...+..+....+-.+++
T Consensus 26 ~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~~ 105 (330)
T 3ib7_A 26 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVW 105 (330)
T ss_dssp EEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred eEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 35899999995 35566677666532 124567999999999986422 2233333332222345999
Q ss_pred Eccccccc
Q psy11688 254 ARGNHESA 261 (546)
Q Consensus 254 lrGNHE~~ 261 (546)
++||||..
T Consensus 106 v~GNHD~~ 113 (330)
T 3ib7_A 106 VMGNHDDR 113 (330)
T ss_dssp CCCTTSCH
T ss_pred eCCCCCCH
Confidence 99999973
No 239
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.10 E-value=1.2e-05 Score=70.56 Aligned_cols=78 Identities=10% Similarity=-0.011 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhC-C--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHH
Q psy11688 34 RAEKLKAEANEHFKNQ---AYNKAIELYSAAIEVN-P--TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR 107 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g---~~~~Ai~~~~~al~~~-p--~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~ 107 (546)
..+..++.|.++.+.+ +.++|+..+++.++.+ | +..++|++|.+|+++++|++|.++++++++++|+|..|...
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 4678899999999977 7789999999999999 7 38999999999999999999999999999999999988665
Q ss_pred HHHH
Q psy11688 108 RAAA 111 (546)
Q Consensus 108 lg~~ 111 (546)
+..+
T Consensus 111 k~~i 114 (152)
T 1pc2_A 111 ERLI 114 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 240
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.04 E-value=1.5e-05 Score=67.44 Aligned_cols=100 Identities=10% Similarity=0.074 Sum_probs=84.1
Q ss_pred ccCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHccCHHH---HHHHHHHHHHhC-C-CcHHHHHHHHHHHHHhcChHHH
Q psy11688 48 NQAYNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEAIGY---ALNDASKAIELD-Q-TYTKAYYRRAAAYMSLGKFKLA 121 (546)
Q Consensus 48 ~g~~~~Ai~~~~~al~~~p-~~~a~~nla~~~~~~g~~~~---Al~~~~~al~l~-p-~~~~a~~~lg~~~~~~g~~~eA 121 (546)
......+.+.|.++...++ +..+-+++|.++.+..+..+ ++..++..++-+ | ..-+..|.+|..++++|+|++|
T Consensus 14 ~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A 93 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 93 (126)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHH
Confidence 3445667777888877655 69999999999999887777 999999999887 5 5778999999999999999999
Q ss_pred HHHHHHhhccCCCCcchhcccccchh
Q psy11688 122 LRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 122 ~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
+++++.+|+.+|+|..+......+..
T Consensus 94 ~~~~~~lL~~eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 94 LKYVRGLLQTEPQNNQAKELERLIDK 119 (126)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99999999999999988765544443
No 241
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.03 E-value=4.9e-05 Score=75.14 Aligned_cols=115 Identities=10% Similarity=-0.011 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--C-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----cHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNP--T-AIYYANRSFAYLKTEAIGYALNDASKAIELDQT----YTKAYYR 107 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p--~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~----~~~a~~~ 107 (546)
..++...|.++...|++++|++.+.+.+..+| + ..++...+.+++++|+.+.|.+.++++.+.+|+ +......
T Consensus 100 ~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~ 179 (310)
T 3mv2_B 100 PYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILN 179 (310)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHH
Confidence 34456889999999999999999999999887 4 789999999999999999999999999999994 2334455
Q ss_pred HHHH--HHHhc--ChHHHHHHHHHhhccCCC--Ccchhcccccchhhhhhh
Q psy11688 108 RAAA--YMSLG--KFKLALRDYEAVHKARPN--DKDAKAKFTECNKIVKRM 152 (546)
Q Consensus 108 lg~~--~~~~g--~~~eA~~~~~kal~l~P~--~~~~~~~l~~~~~~l~~~ 152 (546)
++.+ ....| ++++|...|+++.+..|+ ....+.+ ++..++++
T Consensus 180 Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~ 227 (310)
T 3mv2_B 180 LAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNI 227 (310)
T ss_dssp HHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCH
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCH
Confidence 5544 55556 899999999999888886 3334433 55555555
No 242
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.99 E-value=2.7e-05 Score=89.96 Aligned_cols=93 Identities=12% Similarity=0.011 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc----------
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTY---------- 101 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~---------- 101 (546)
.+..+.|++.|.++.+.|++++|+..|.+| .++.+|.+.|.++.++|+|++|++++..|.+.+++.
T Consensus 1102 vn~p~vWsqLAKAql~~G~~kEAIdsYiKA----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaY 1177 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQKGMVKEAIDSYIKA----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFAL 1177 (1630)
T ss_pred cCCHHHHHHHHHHHHhCCCHHHHHHHHHhc----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHH
Confidence 345678888888888889999999988776 457888888888888899999888888877666331
Q ss_pred -----------------HHHHHHHHHHHHHhcChHHHHHHHHHh
Q psy11688 102 -----------------TKAYYRRAAAYMSLGKFKLALRDYEAV 128 (546)
Q Consensus 102 -----------------~~a~~~lg~~~~~~g~~~eA~~~~~ka 128 (546)
...+...|..+...|+|++|...|.+|
T Consensus 1178 AKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1178 AKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 223455666666666666666666654
No 243
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.99 E-value=2.1e-05 Score=77.77 Aligned_cols=117 Identities=9% Similarity=-0.092 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----CHHHHHHHHHH--HHHcc--CHHHHHHHHHHHHHhCCCcHH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP-----TAIYYANRSFA--YLKTE--AIGYALNDASKAIELDQTYTK 103 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p-----~~~a~~nla~~--~~~~g--~~~~Al~~~~~al~l~p~~~~ 103 (546)
...++....+.++.+.|+.+.|.+.+++..+.+| +.....+++.+ .+..| ++++|...|+++.+..|++..
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~ 213 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKT 213 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCccc
Confidence 5566777778899999999999999999999999 46677777777 55556 999999999999998887433
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhhcc----------CCCCcchhcccccchhhhh
Q psy11688 104 AYYRRAAAYMSLGKFKLALRDYEAVHKA----------RPNDKDAKAKFTECNKIVK 150 (546)
Q Consensus 104 a~~~lg~~~~~~g~~~eA~~~~~kal~l----------~P~~~~~~~~l~~~~~~l~ 150 (546)
....++ ++..+|++++|.+.+++++++ +|+++.++.++..+...++
T Consensus 214 ~~lLln-~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lg 269 (310)
T 3mv2_B 214 QLGLLN-LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQG 269 (310)
T ss_dssp HHHHHH-HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHH-HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhC
Confidence 333333 999999999999999988887 5888888877766655554
No 244
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=97.97 E-value=0.00019 Score=69.46 Aligned_cols=69 Identities=14% Similarity=0.140 Sum_probs=46.9
Q ss_pred ccccccccchhH------------hhHHHHHHHhCCC-CCCCCeeeeccccccCCChH--HHHHHHhhhhhcCCCeEEEE
Q psy11688 190 KFTVCGDIHGQF------------YDLMNIFELNGLP-SPDNPYLFNGDFVDRGSFSV--ECIFTLFGFKLLYPNHFFMA 254 (546)
Q Consensus 190 ~~~viGDihg~~------------~~l~~il~~~~~~-~~~~~~~~lGD~vdrG~~~~--e~l~~l~~l~~~~p~~v~~l 254 (546)
++.+++|+|+.. ..+.++++..... +..+.++++||+++.|.... ++...+..+ +-.++.+
T Consensus 2 ri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l----~~p~~~v 77 (274)
T 3d03_A 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSL----NYPLYLI 77 (274)
T ss_dssp EEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTC----SSCEEEE
T ss_pred EEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhc----CCCEEEE
Confidence 367899999874 5677777765322 34577999999999887432 333344333 2349999
Q ss_pred ccccccch
Q psy11688 255 RGNHESAY 262 (546)
Q Consensus 255 rGNHE~~~ 262 (546)
+||||...
T Consensus 78 ~GNHD~~~ 85 (274)
T 3d03_A 78 PGNHDDKA 85 (274)
T ss_dssp CCTTSCHH
T ss_pred CCCCCCHH
Confidence 99999753
No 245
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.95 E-value=1.3e-05 Score=83.07 Aligned_cols=100 Identities=14% Similarity=0.166 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHH----------
Q psy11688 37 KLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYY---------- 106 (546)
Q Consensus 37 ~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~---------- 106 (546)
++...|..++..|+|++|+.+|+++ ..|..+|.|+.++|+|++|++.+++| +++++|-
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ 191 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGK 191 (449)
T ss_dssp -------------CTTTHHHHHHHT-------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcC
Confidence 7788888888888888888888876 46788888888888888888888888 2333332
Q ss_pred --------------------HHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhh
Q psy11688 107 --------------------RRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKI 148 (546)
Q Consensus 107 --------------------~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~ 148 (546)
.+..+|.+.|++++|+..+++++.+++....++..++.++.+
T Consensus 192 ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 192 EFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp CHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 344678888999999999999999998888888777766643
No 246
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.92 E-value=3e-05 Score=89.67 Aligned_cols=106 Identities=12% Similarity=0.112 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----------------
Q psy11688 36 EKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQ---------------- 99 (546)
Q Consensus 36 ~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p---------------- 99 (546)
..+...|..++..|+|++|+.+|.+| ..|..+|.++.++|++++|++.+++|...++
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA-------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~L 1268 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRL 1268 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh-------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHH
Confidence 35667999999999999999999996 4899999999999999999999999854433
Q ss_pred ---------CcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchhh
Q psy11688 100 ---------TYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKI 148 (546)
Q Consensus 100 ---------~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~ 148 (546)
.+++.+..++..|...|.|++|+..+++++.++|.+...+..++.++.+
T Consensus 1269 A~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaK 1326 (1630)
T 1xi4_A 1269 AQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 1326 (1630)
T ss_pred HHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHh
Confidence 1344455777889999999999999999999999998888777776654
No 247
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.83 E-value=5e-05 Score=78.26 Aligned_cols=102 Identities=8% Similarity=-0.044 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCC------C-HHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCcH
Q psy11688 36 EKLKAEANEHFKNQAYNKAIELYSAAIEVNP------T-AIYYANRSFAYLKTEAIGYALNDASKAIEL------DQTYT 102 (546)
Q Consensus 36 ~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p------~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l------~p~~~ 102 (546)
......|..+...|++++|+..+++++...+ . +.++.++|.+|...|+|++|+..+++++.. .|...
T Consensus 96 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~ 175 (434)
T 4b4t_Q 96 VLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLV 175 (434)
T ss_dssp HHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHH
Confidence 3445567777788999999999999998644 1 789999999999999999999999999876 45567
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcc
Q psy11688 103 KAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKD 137 (546)
Q Consensus 103 ~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~ 137 (546)
+++..+|.+|..+|++++|...|++++...+....
T Consensus 176 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 210 (434)
T 4b4t_Q 176 DVHLLESKVYHKLRNLAKSKASLTAARTAANSIYC 210 (434)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCC
Confidence 88999999999999999999999999988655443
No 248
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.73 E-value=3.2e-06 Score=87.45 Aligned_cols=110 Identities=11% Similarity=-0.016 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAY 112 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 112 (546)
+.++.|..+|.++.+.|++++|++.|.++ ++...|...+.++...|++++|+.+++.+.+..++ +.....++.+|
T Consensus 30 ~~~~vWs~La~A~l~~g~~~eAIdsfika----~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~-~~i~~~Li~~Y 104 (449)
T 1b89_A 30 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE-SYVETELIFAL 104 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHcC----CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCcc-chhHHHHHHHH
Confidence 34568999999999999999999999775 46678999999999999999999999988885443 66677788888
Q ss_pred HHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhh
Q psy11688 113 MSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 113 ~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~ 153 (546)
.++|+++++.+.++. |+ ..++..++..+...+.++
T Consensus 105 ~Klg~l~e~e~f~~~-----pn-~~a~~~IGd~~~~~g~ye 139 (449)
T 1b89_A 105 AKTNRLAELEEFING-----PN-NAHIQQVGDRCYDEKMYD 139 (449)
T ss_dssp ----CHHHHTTTTTC-----C-----------------CTT
T ss_pred HHhCCHHHHHHHHcC-----Cc-HHHHHHHHHHHHHcCCHH
Confidence 888888887766642 43 347777777776666653
No 249
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.66 E-value=0.00016 Score=72.91 Aligned_cols=75 Identities=11% Similarity=0.022 Sum_probs=67.7
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTK 103 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~ 103 (546)
..+|..+..+...|..++..|++++|+..+++|++++|+..+|..+|.++...|++++|++.|++|++++|....
T Consensus 271 ~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 271 PELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp GGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred ccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 445666777777888888899999999999999999999999999999999999999999999999999998764
No 250
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=97.65 E-value=3e-05 Score=74.50 Aligned_cols=59 Identities=14% Similarity=-0.020 Sum_probs=48.2
Q ss_pred HhhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 460 KAQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 460 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
-..+|+|+++ ..|..+++... ....++++||++|+|+.+.|++.+|..++. +++++|||
T Consensus 7 ~~isDiHg~~--~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~~-----~~~v~GNh 65 (246)
T 3rqz_A 7 LIISDVHANL--VALEAVLSDAG--RVDDIWSLGDIVGYGPRPRECVELVRVLAP-----NISVIGNH 65 (246)
T ss_dssp EEECCCTTCH--HHHHHHHHHHC--SCSEEEECSCCSSSSSCHHHHHHHHHHHCS-----SEECCCHH
T ss_pred EEEeecCCCH--HHHHHHHHhcc--CCCEEEECCCcCCCCCCHHHHHHHHHhcCC-----CEEEeCch
Confidence 3568999985 44666766655 446799999999999999999999998763 78999999
No 251
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.62 E-value=0.0002 Score=74.61 Aligned_cols=89 Identities=7% Similarity=0.002 Sum_probs=74.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy11688 27 VSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVN-----PT----AIYYANRSFAYLKTEAIGYALNDASKAIEL 97 (546)
Q Consensus 27 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~-----p~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l 97 (546)
.-.++|.-+..+.++|..|..+|+|++|+.++++++++. |+ +..++|+|.+|..+|++++|+..+++|+++
T Consensus 321 lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 321 LPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 447889999999999999999999999999999999752 22 788999999999999999999999999975
Q ss_pred -----CCCcHH---HHHHHHHHHHHh
Q psy11688 98 -----DQTYTK---AYYRRAAAYMSL 115 (546)
Q Consensus 98 -----~p~~~~---a~~~lg~~~~~~ 115 (546)
.|+++. .+.+++.+...+
T Consensus 401 ~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 401 MRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 566654 345566665543
No 252
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.61 E-value=0.00045 Score=66.97 Aligned_cols=119 Identities=13% Similarity=0.118 Sum_probs=84.5
Q ss_pred hhHHHHHHHHHHHHHHHHc------cCHHHHHHH-----HHHHHH-hCCC-HHHHHHHHHHHHH-----------ccCHH
Q psy11688 30 EDKERAEKLKAEANEHFKN------QAYNKAIEL-----YSAAIE-VNPT-AIYYANRSFAYLK-----------TEAIG 85 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~------g~~~~Ai~~-----~~~al~-~~p~-~~a~~nla~~~~~-----------~g~~~ 85 (546)
.++..+..++.+|..|..+ ..+.+++.. +.+++. .+|+ ..+++-.|.+... ++...
T Consensus 101 ~~~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~ 180 (301)
T 3u64_A 101 EAYSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVH 180 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHH
Confidence 3455667777777655422 344434432 344443 3453 6666666666543 22356
Q ss_pred HHHHHHHHHHHhCCC--cHHHHHHHHHHHHHh-----cChHHHHHHHHHhhccCCCC-cchhcccccchhh
Q psy11688 86 YALNDASKAIELDQT--YTKAYYRRAAAYMSL-----GKFKLALRDYEAVHKARPND-KDAKAKFTECNKI 148 (546)
Q Consensus 86 ~Al~~~~~al~l~p~--~~~a~~~lg~~~~~~-----g~~~eA~~~~~kal~l~P~~-~~~~~~l~~~~~~ 148 (546)
+|...+++|+++||+ +..+|..+|..|... |+.++|.++|++|++++|+. ..++...++.+..
T Consensus 181 ~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~ 251 (301)
T 3u64_A 181 AAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCI 251 (301)
T ss_dssp HHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHH
Confidence 899999999999999 566999999999995 99999999999999999975 8888777776543
No 253
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.59 E-value=0.00014 Score=75.82 Aligned_cols=77 Identities=12% Similarity=0.031 Sum_probs=67.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CC---C-HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEV-----NP---T-AIYYANRSFAYLKTEAIGYALNDASKAIEL- 97 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~-----~p---~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l- 97 (546)
-.+.|.-+..+.++|..|..+|+|++|+.+|++++++ -| + +..+.|+|.+|..+|+|++|+..+++|+++
T Consensus 333 g~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 333 EDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp CTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 4678889999999999999999999999999999985 22 2 788999999999999999999999999976
Q ss_pred ----CCCcHHH
Q psy11688 98 ----DQTYTKA 104 (546)
Q Consensus 98 ----~p~~~~a 104 (546)
.|+++..
T Consensus 413 ~~~lG~~Hp~~ 423 (433)
T 3qww_A 413 EVAHGKDHPYI 423 (433)
T ss_dssp HHHTCTTCHHH
T ss_pred HHHcCCCChHH
Confidence 4666553
No 254
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.53 E-value=0.00046 Score=59.28 Aligned_cols=77 Identities=14% Similarity=0.221 Sum_probs=68.1
Q ss_pred CCCHHHHHHHHHHHHHccCHH---HHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhc
Q psy11688 65 NPTAIYYANRSFAYLKTEAIG---YALNDASKAIELDQT-YTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKA 140 (546)
Q Consensus 65 ~p~~~a~~nla~~~~~~g~~~---~Al~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~ 140 (546)
.|...+-+++|.++.+..+.+ +++..++..++-+|. .-+..|.+|..++++|+|++|.++.+.+|+.+|+|..+..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 467899999999999977555 699999999999994 6688999999999999999999999999999999988764
Q ss_pred c
Q psy11688 141 K 141 (546)
Q Consensus 141 ~ 141 (546)
.
T Consensus 116 L 116 (144)
T 1y8m_A 116 L 116 (144)
T ss_dssp H
T ss_pred H
Confidence 3
No 255
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=97.53 E-value=4.5e-05 Score=74.36 Aligned_cols=60 Identities=10% Similarity=-0.124 Sum_probs=47.1
Q ss_pred hhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 461 AQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 461 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
...|+|+++ ..|..+++......-..++++||+|++|+.+.||+.+|..++ .+++++|||
T Consensus 16 ~iSDiHg~~--~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNh 75 (270)
T 3qfm_A 16 LLSDIHGNT--TALEAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNW 75 (270)
T ss_dssp EECCCTTCH--HHHHHHHHHHHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHH
T ss_pred EEecCCCCH--HHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCCh
Confidence 468999985 446666554433344679999999999999999999998764 388999999
No 256
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.51 E-value=0.00051 Score=58.28 Aligned_cols=86 Identities=13% Similarity=0.181 Sum_probs=72.4
Q ss_pred hCCCHHHHHHHHHHHHHccCH---HHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchh
Q psy11688 64 VNPTAIYYANRSFAYLKTEAI---GYALNDASKAIELDQT-YTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAK 139 (546)
Q Consensus 64 ~~p~~~a~~nla~~~~~~g~~---~~Al~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~ 139 (546)
-.|...+-+++|.++.+..+. .+++..++..++.+|. .-+.+|.+|..++++|+|++|.++.+.+++..|+|..+.
T Consensus 36 ~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 36 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 115 (134)
T ss_dssp GGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred CCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHH
Confidence 345788899999999887655 4699999999999994 578899999999999999999999999999999999887
Q ss_pred cccccchhhh
Q psy11688 140 AKFTECNKIV 149 (546)
Q Consensus 140 ~~l~~~~~~l 149 (546)
.....+...+
T Consensus 116 ~Lk~~Ie~ki 125 (134)
T 3o48_A 116 ALKSMVEDKI 125 (134)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6655555443
No 257
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.50 E-value=0.0005 Score=60.71 Aligned_cols=95 Identities=12% Similarity=0.097 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC---CC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC---CC
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVN---PT-------AIYYANRSFAYLKTEAIGYALNDASKAIELD---QT 100 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~---p~-------~~a~~nla~~~~~~g~~~~Al~~~~~al~l~---p~ 100 (546)
...++++....++..|.|+.|+-..+.++.+. |+ +.++..+|.+++..++|..|...|++||+.. +.
T Consensus 19 ~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k 98 (167)
T 3ffl_A 19 SHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSK 98 (167)
T ss_dssp --CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhc
Confidence 35678899999999999999999999977653 32 5689999999999999999999999998543 11
Q ss_pred c----------------------HHHHHHHHHHHHHhcChHHHHHHHHHh
Q psy11688 101 Y----------------------TKAYYRRAAAYMSLGKFKLALRDYEAV 128 (546)
Q Consensus 101 ~----------------------~~a~~~lg~~~~~~g~~~eA~~~~~ka 128 (546)
+ .+.-|..|.||.+++++++|+..++.+
T Consensus 99 ~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 99 TSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred CCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 1 267799999999999999999998754
No 258
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=97.48 E-value=5.2e-05 Score=72.88 Aligned_cols=63 Identities=10% Similarity=-0.042 Sum_probs=46.7
Q ss_pred hhCcchhhhHHHHHHHHHHhcC---CC--CCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 461 AQGKLHRKYAYRILMDIKKKKI---LN--LDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 461 ~~~~~~~~~~~~~l~~~~~~~~---~~--~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
..+|+|+.+. .+..+++... .. .....|++||++|+|+.+.|++.+|..++...| +++++|||
T Consensus 6 ~isD~H~~~~--~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~~--~~~v~GNh 73 (252)
T 1nnw_A 6 VLANIAGNLP--ALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKEN--VKIIRGKY 73 (252)
T ss_dssp EEECCTTCHH--HHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHSC--EEEECCHH
T ss_pred EEeecCCCHH--HHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhcC--eeEEecch
Confidence 4689998753 3444444322 22 236789999999999999999999988764344 99999999
No 259
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=97.43 E-value=5e-05 Score=73.19 Aligned_cols=72 Identities=8% Similarity=0.054 Sum_probs=51.3
Q ss_pred ccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCCh--------------------------HHHHHHHhhh
Q psy11688 190 KFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFS--------------------------VECIFTLFGF 243 (546)
Q Consensus 190 ~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~--------------------------~e~l~~l~~l 243 (546)
++++++|+|+....+.++++..... ..+.++++||++++|+.+ .....++..+
T Consensus 7 ri~~iSDlH~~~~~~~~~l~~~~~~-~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~l 85 (260)
T 2yvt_A 7 KVLAIKNFKERFDLLPKLKGVIAEK-QPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFREI 85 (260)
T ss_dssp EEEEEECCTTCGGGHHHHHHHHHHH-CCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeecCCChHHHHHHHHHHHhc-CCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHHH
Confidence 4889999999998888888765322 346799999999998652 1233344444
Q ss_pred hhcCCCeEEEEccccccchh
Q psy11688 244 KLLYPNHFFMARGNHESAYM 263 (546)
Q Consensus 244 ~~~~p~~v~~lrGNHE~~~~ 263 (546)
+. .+..+++++||||....
T Consensus 86 ~~-~~~pv~~v~GNHD~~~~ 104 (260)
T 2yvt_A 86 GE-LGVKTFVVPGKNDAPLK 104 (260)
T ss_dssp HT-TCSEEEEECCTTSCCHH
T ss_pred Hh-cCCcEEEEcCCCCchhh
Confidence 32 23469999999998653
No 260
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.21 E-value=0.00038 Score=76.67 Aligned_cols=103 Identities=15% Similarity=0.038 Sum_probs=52.8
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHh-----------CCC------------HHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy11688 38 LKAEANEHFKNQAYNKAIELYSAAIEV-----------NPT------------AIYYANRSFAYLKTEAIGYALNDASKA 94 (546)
Q Consensus 38 ~~~~g~~~~~~g~~~~Ai~~~~~al~~-----------~p~------------~~a~~nla~~~~~~g~~~~Al~~~~~a 94 (546)
+...+....+.|++++|...|++++.. .|. ..+|...+....+.+..+.|.+.|.+|
T Consensus 381 wl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A 460 (679)
T 4e6h_A 381 AFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKC 460 (679)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 444455555555555555555555543 121 234555555555555555566666665
Q ss_pred HHh-CCCcHHHHHHHHHHHHHhcC-hHHHHHHHHHhhccCCCCcchhc
Q psy11688 95 IEL-DQTYTKAYYRRAAAYMSLGK-FKLALRDYEAVHKARPNDKDAKA 140 (546)
Q Consensus 95 l~l-~p~~~~a~~~lg~~~~~~g~-~~eA~~~~~kal~l~P~~~~~~~ 140 (546)
++. .+.....|...|..-...++ ++.|.+.|+++++..|+++..+.
T Consensus 461 ~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~ 508 (679)
T 4e6h_A 461 RRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYIN 508 (679)
T ss_dssp HHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHH
Confidence 555 32334444444444444432 55566666666655555555443
No 261
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=97.16 E-value=0.011 Score=57.86 Aligned_cols=65 Identities=20% Similarity=0.217 Sum_probs=45.8
Q ss_pred ccccccccccchhHhhHHHHHHHhCCCCCCCCeeeeccccccCCCh--HHHHHHHhhhhhcCCCeEEEEccccccchh
Q psy11688 188 EAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFS--VECIFTLFGFKLLYPNHFFMARGNHESAYM 263 (546)
Q Consensus 188 ~~~~~viGDihg~~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~--~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~ 263 (546)
.-++.+++|+|+....+ .. +..|.+++.||++++|... .+++.+|.++. ...++++.||||...-
T Consensus 59 ~mri~~iSD~H~~~~~l-------~i-~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~---~~~v~~V~GNHD~~~d 125 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDGI-------QM-PYGDILLHTGDFTELGLPSEVKKFNDWLGNLP---YEYKIVIAGNHELTFD 125 (296)
T ss_dssp EEEEEEEBCCTTCCTTC-------CC-CSCSEEEECSCCSSSCCHHHHHHHHHHHHTSC---CSEEEECCCTTCGGGC
T ss_pred CeEEEEEeeCCCCcchh-------cc-CCCCEEEECCcccCCCCHHHHHHHHHHHHhCC---CCeEEEEcCCcccccc
Confidence 35799999999987643 12 3567899999999999742 23444444432 1358999999998653
No 262
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=97.15 E-value=0.0043 Score=64.66 Aligned_cols=61 Identities=18% Similarity=0.140 Sum_probs=37.6
Q ss_pred CHHHHHHHHHhcCCcEEEEeccccccCceEe-CCCeEEEEeCCCCCCCCCCCceeEEEeeCCC
Q psy11688 361 GPDVTKAFLERNKLEYIIRSHEVKQDGYEVA-HDGRCITVFSAPNYCDSVGNKGAFITMKGKD 422 (546)
Q Consensus 361 g~~~~~~fl~~~~~~~iir~H~~~~~G~~~~-~~~~~itifsa~~y~~~~~n~~a~~~~~~~~ 422 (546)
+.+.+.+.+++.++++++-||.-........ .+|+-+.++.++..+. ..+.=+++.|.+..
T Consensus 261 ~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~-~p~~y~il~i~~~~ 322 (443)
T 2xmo_A 261 YNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV-FPHKYGNITYSAKN 322 (443)
T ss_dssp THHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS-TTCEEEEEEEETTT
T ss_pred cHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc-CCCCeEEEEEeCCC
Confidence 5678889999999999999999864433222 2444344444433432 23444677775433
No 263
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.13 E-value=0.0023 Score=54.08 Aligned_cols=77 Identities=9% Similarity=-0.026 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHccCHHH---HHHHHHHHHHhC-C--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNK---AIELYSAAIEVN-P--TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRR 108 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~---Ai~~~~~al~~~-p--~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~l 108 (546)
.+..++.|-++.+..+-.+ +|..++..+..+ | .-..+|.+|..++++|+|++|.++++..|+.+|+|..|.-..
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4667888888888776666 999999999887 6 378999999999999999999999999999999999986655
Q ss_pred HHH
Q psy11688 109 AAA 111 (546)
Q Consensus 109 g~~ 111 (546)
..+
T Consensus 115 ~~i 117 (126)
T 1nzn_A 115 RLI 117 (126)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 264
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.02 E-value=0.0034 Score=69.09 Aligned_cols=101 Identities=7% Similarity=-0.030 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCCcHHHHHHHHH
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP--TAIYYANRSFAYLKTEA-IGYALNDASKAIELDQTYTKAYYRRAA 110 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p--~~~a~~nla~~~~~~g~-~~~Al~~~~~al~l~p~~~~a~~~lg~ 110 (546)
.+..|...+....+.|+.+.|...|.+|++..| ...+|...|..-.+.++ ++.|.+.|+++++..|+.+..|...+.
T Consensus 433 ~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~ 512 (679)
T 4e6h_A 433 LTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLD 512 (679)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 455677778888888999999999999998733 36777777777767654 899999999999999999999988999
Q ss_pred HHHHhcChHHHHHHHHHhhccCCC
Q psy11688 111 AYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 111 ~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
.....|+.+.|...|++|++..|+
T Consensus 513 fe~~~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 513 FLIYVNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp HHHHHTCHHHHHHHHHHHTTTSSS
T ss_pred HHHhCCCHHHHHHHHHHHHHhcCC
Confidence 889999999999999999999884
No 265
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.99 E-value=0.0039 Score=53.94 Aligned_cols=106 Identities=18% Similarity=0.007 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHccCH------HHHHHHHHHHHHhCCC---------HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAY------NKAIELYSAAIEVNPT---------AIYYANRSFAYLKTEAIGYALNDASKAIE 96 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~------~~Ai~~~~~al~~~p~---------~~a~~nla~~~~~~g~~~~Al~~~~~al~ 96 (546)
|.+.+.|..-....-+.|+. ++-++.|++|+..-|- ...|...|.- ...++.++|.+.|+.++.
T Consensus 10 p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~ 88 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARA 88 (161)
T ss_dssp CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 34456777777777777888 8889999999998771 5667777744 677999999999999999
Q ss_pred hCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcch
Q psy11688 97 LDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA 138 (546)
Q Consensus 97 l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~ 138 (546)
+...+++.|...|.--.++|+.+.|.+.+.+|+.+.|...+.
T Consensus 89 ~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 89 NCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 999999999999999999999999999999999999875543
No 266
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.87 E-value=0.012 Score=50.45 Aligned_cols=77 Identities=6% Similarity=-0.043 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQA---YNKAIELYSAAIEVNPT--AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRA 109 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~---~~~Ai~~~~~al~~~p~--~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg 109 (546)
.+..|+.|-++.+..+ -.++|..++..+...|. -..+|.+|..++++|+|++|.++.+..|+.+|+|..|.-...
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 4566888888887665 45799999999999994 789999999999999999999999999999999988755543
Q ss_pred HH
Q psy11688 110 AA 111 (546)
Q Consensus 110 ~~ 111 (546)
.+
T Consensus 119 ~I 120 (144)
T 1y8m_A 119 MV 120 (144)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 267
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.82 E-value=0.01 Score=50.22 Aligned_cols=78 Identities=6% Similarity=-0.054 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQA---YNKAIELYSAAIEVNPT--AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRA 109 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~---~~~Ai~~~~~al~~~p~--~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg 109 (546)
++..|+.|-++.+..+ ..++|..++..++.+|. -..++.+|..+.++|+|++|.++.+.+++.+|+|..|.-...
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~ 119 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 119 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHH
Confidence 4566778888877654 45799999999999994 789999999999999999999999999999999998866554
Q ss_pred HHH
Q psy11688 110 AAY 112 (546)
Q Consensus 110 ~~~ 112 (546)
.+-
T Consensus 120 ~Ie 122 (134)
T 3o48_A 120 MVE 122 (134)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 268
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=96.77 E-value=0.001 Score=61.91 Aligned_cols=63 Identities=11% Similarity=0.106 Sum_probs=45.1
Q ss_pred hHhhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCC--------chHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 459 YKAQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGS--------FSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 459 f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~--------~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
+-..+|+|+.+ ..+.++++..........+++||++|+|+ .+.|++.+|-.++ ..+++++|||
T Consensus 28 i~~iSD~H~~~--~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNH 98 (208)
T 1su1_A 28 LMFASDIHGSL--PATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVRGNC 98 (208)
T ss_dssp EEEECCCTTBH--HHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECCCTT
T ss_pred EEEEEcCCCCH--HHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEECCC
Confidence 45678999884 33555544332122367899999999998 3688888887765 2599999999
No 269
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.36 E-value=0.073 Score=56.17 Aligned_cols=157 Identities=10% Similarity=-0.012 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNP--TAIYYANRSFAYLKTE-AIGYALNDASKAIELDQTYTKAYYRRAAA 111 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p--~~~a~~nla~~~~~~g-~~~~Al~~~~~al~l~p~~~~a~~~lg~~ 111 (546)
...|..-+....+.++.+.|...|++| + .| ....|...|..-...+ +.+.|.+.|+++++..|+.+..|...+..
T Consensus 286 ~~lw~~y~~~~~r~~~~~~AR~i~~~A-~-~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~ 363 (493)
T 2uy1_A 286 DLLRINHLNYVLKKRGLELFRKLFIEL-G-NEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLF 363 (493)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHH-T-TSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHh-h-CCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 456677777777888999999999999 4 44 4677777777777666 59999999999999999999888888888
Q ss_pred HHHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhhhhhhchHHHHHHHHHHHHhhhhc----CCccccccccc
Q psy11688 112 YMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMT----QDSLVHITVED 187 (546)
Q Consensus 112 ~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~~~~~l~~~~~~~il~~a~eiL~~----~p~~~~i~~~~ 187 (546)
....|+.+.|...|+++. .....+.......... -+...+..+++++.+.+.. +|..+-
T Consensus 364 e~~~~~~~~aR~l~er~~----k~~~lw~~~~~fE~~~--------G~~~~~r~v~~~~~~~~~~~~~~~~~~~~----- 426 (493)
T 2uy1_A 364 LLRIGDEENARALFKRLE----KTSRMWDSMIEYEFMV--------GSMELFRELVDQKMDAIKADAILPPLPPR----- 426 (493)
T ss_dssp HHHHTCHHHHHHHHHHSC----CBHHHHHHHHHHHHHH--------SCHHHHHHHHHHHHHHHHTTCCBCCCCCC-----
T ss_pred HHHcCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHHHhcccccCCccccc-----
Confidence 889999999999999983 2222332222222222 2335566677777776653 222111
Q ss_pred ccccccccccchhHhhHHHHHHHh
Q psy11688 188 EAKFTVCGDIHGQFYDLMNIFELN 211 (546)
Q Consensus 188 ~~~~~viGDihg~~~~l~~il~~~ 211 (546)
..+..+-..||.++++..-.+..
T Consensus 427 -~~~~~fe~~~g~l~~~~~~~~~~ 449 (493)
T 2uy1_A 427 -EHNVQMEGILGRYHCFLDSFNFL 449 (493)
T ss_dssp ---CCCCCHHHHHHHHHHHHHCBT
T ss_pred -ccHHHHHHHhhhHHHHHHHhhhh
Confidence 12344455667776666655443
No 270
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=96.23 E-value=0.0017 Score=64.06 Aligned_cols=71 Identities=17% Similarity=0.011 Sum_probs=44.9
Q ss_pred ccccccccchhH-------------------hhHHHHHHHhCCCCCCCCeeeeccccccCCC----hHHHHHHHhhhhhc
Q psy11688 190 KFTVCGDIHGQF-------------------YDLMNIFELNGLPSPDNPYLFNGDFVDRGSF----SVECIFTLFGFKLL 246 (546)
Q Consensus 190 ~~~viGDihg~~-------------------~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~----~~e~l~~l~~l~~~ 246 (546)
++.+++|+|... ..+.++++.... ...+.++++||+++.+.. ..+.+..+...-..
T Consensus 7 ~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (322)
T 2nxf_A 7 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRR-ERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDA 85 (322)
T ss_dssp EEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHH-TTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHT
T ss_pred EEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHh-cCCCEEEECCCccCCCCCcchHHHHHHHHHHHHHHh
Confidence 477889998654 445666655422 244679999999998751 13333323222222
Q ss_pred CCCeEEEEccccccc
Q psy11688 247 YPNHFFMARGNHESA 261 (546)
Q Consensus 247 ~p~~v~~lrGNHE~~ 261 (546)
.+..+++++||||..
T Consensus 86 ~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 86 CSVDVHHVWGNHEFY 100 (322)
T ss_dssp TCSEEEECCCHHHHH
T ss_pred cCCcEEEecCCCCcc
Confidence 345799999999985
No 271
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=96.21 E-value=0.0019 Score=64.87 Aligned_cols=72 Identities=24% Similarity=0.176 Sum_probs=43.7
Q ss_pred ccccccccccc-h----h-----------HhhHHHHHHHhCCCCCCCCeeeecc-ccccCCChHHH----HHHHhhhhhc
Q psy11688 188 EAKFTVCGDIH-G----Q-----------FYDLMNIFELNGLPSPDNPYLFNGD-FVDRGSFSVEC----IFTLFGFKLL 246 (546)
Q Consensus 188 ~~~~~viGDih-g----~-----------~~~l~~il~~~~~~~~~~~~~~lGD-~vdrG~~~~e~----l~~l~~l~~~ 246 (546)
.-++..++|+| | . ...+.++++.+... ..+.+++.|| ++|++..+.++ ...+..+...
T Consensus 18 ~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~-~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~~ 96 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKR-EVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT 96 (336)
T ss_dssp EEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHH-TCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHh-CCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 34688899999 6 2 33455555544222 3457999999 99999877654 3455555422
Q ss_pred CCCeEEEEccccccch
Q psy11688 247 YPNHFFMARGNHESAY 262 (546)
Q Consensus 247 ~p~~v~~lrGNHE~~~ 262 (546)
-.++++.||||...
T Consensus 97 --~pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 97 --APVVVLPGNHDWKG 110 (336)
T ss_dssp --SCEEECCC------
T ss_pred --CCEEEECCCCCccc
Confidence 35999999999754
No 272
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=96.08 E-value=0.0044 Score=63.42 Aligned_cols=71 Identities=15% Similarity=0.120 Sum_probs=47.5
Q ss_pred ccccccccchhH-------------hhHHHHHHHhCCCCCCCCeeeeccccccCCChHHH----HHHHhhhhhcCCCeEE
Q psy11688 190 KFTVCGDIHGQF-------------YDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVEC----IFTLFGFKLLYPNHFF 252 (546)
Q Consensus 190 ~~~viGDihg~~-------------~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~----l~~l~~l~~~~p~~v~ 252 (546)
++..++|+|... ..+.++++.+... ..+.+++.||++|++..+.+. ...+..++. .+-.|+
T Consensus 22 rilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~-~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~-~~~pv~ 99 (386)
T 3av0_A 22 MFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEI-KPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE-NNIKVY 99 (386)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTT-CCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH-TTCEEE
T ss_pred EEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHc-CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-cCCcEE
Confidence 488899999652 3456666655322 456799999999998544333 334444432 234699
Q ss_pred EEccccccch
Q psy11688 253 MARGNHESAY 262 (546)
Q Consensus 253 ~lrGNHE~~~ 262 (546)
++.||||...
T Consensus 100 ~v~GNHD~~~ 109 (386)
T 3av0_A 100 IVAGNHEMPR 109 (386)
T ss_dssp ECCCGGGSCS
T ss_pred EEcCCCCCCc
Confidence 9999999754
No 273
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.03 E-value=0.069 Score=54.50 Aligned_cols=102 Identities=14% Similarity=0.035 Sum_probs=86.4
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--------C---------------HHHHHHHHHHHHHccCHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP--------T---------------AIYYANRSFAYLKTEAIG 85 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p--------~---------------~~a~~nla~~~~~~g~~~ 85 (546)
.-+-...+.+...|......|+.+.|...+.+|+.+.. . ..+...++.++...|+++
T Consensus 109 ~~D~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~ 188 (388)
T 2ff4_A 109 TCDLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRAS 188 (388)
T ss_dssp GBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 44556667777888888888999999999999998742 0 124446778888999999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhc
Q psy11688 86 YALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHK 130 (546)
Q Consensus 86 ~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~ 130 (546)
+|+..+++++..+|-+-.+|..+-.++...|+..+|++.|+++-+
T Consensus 189 ~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 189 AVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988744
No 274
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.90 E-value=0.03 Score=49.39 Aligned_cols=80 Identities=16% Similarity=0.111 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC------C--------------------HHHHHHHHHHHHHccCHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP------T--------------------AIYYANRSFAYLKTEAIG 85 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p------~--------------------~~a~~nla~~~~~~g~~~ 85 (546)
...++.+...|+.+|.+++|..|...|++|+++.- . .+..+.+|.||.++++++
T Consensus 60 ~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~ 139 (167)
T 3ffl_A 60 PQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDK 139 (167)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHH
Confidence 34678899999999999999999999999987421 0 268899999999999999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy11688 86 YALNDASKAIELDQTYTKAYYRRAAAY 112 (546)
Q Consensus 86 ~Al~~~~~al~l~p~~~~a~~~lg~~~ 112 (546)
+|+..++..- ..-..++.-..+|..|
T Consensus 140 ~Ai~~Le~Ip-~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 140 DAIAILDGIP-SRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHHTSC-GGGCCHHHHHHHHHHC
T ss_pred HHHHHHhcCC-chhcCHHHHHHHHHHh
Confidence 9999865421 1223556666666554
No 275
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=95.89 E-value=0.0054 Score=61.37 Aligned_cols=69 Identities=23% Similarity=0.202 Sum_probs=43.2
Q ss_pred cccccccchhH-------------hhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHH----HHhhhhhcCCCeEEE
Q psy11688 191 FTVCGDIHGQF-------------YDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIF----TLFGFKLLYPNHFFM 253 (546)
Q Consensus 191 ~~viGDihg~~-------------~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~----~l~~l~~~~p~~v~~ 253 (546)
+..++|+|... ..+.++++.+... ..+.+++.||++|++..+.+.+. .+..++. .+-.+++
T Consensus 3 ilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~-~~~~v~~ 80 (333)
T 1ii7_A 3 FAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQE-NVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKE-HSIPVFA 80 (333)
T ss_dssp EEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHT-TCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-TTCCEEE
T ss_pred EEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhc-CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-CCCcEEE
Confidence 56788888753 2344555543222 34679999999998754444333 3333332 1235999
Q ss_pred Eccccccc
Q psy11688 254 ARGNHESA 261 (546)
Q Consensus 254 lrGNHE~~ 261 (546)
+.||||..
T Consensus 81 v~GNHD~~ 88 (333)
T 1ii7_A 81 IEGNHDRT 88 (333)
T ss_dssp ECCTTTCC
T ss_pred eCCcCCCc
Confidence 99999975
No 276
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.84 E-value=0.04 Score=58.24 Aligned_cols=32 Identities=16% Similarity=0.011 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT 67 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~ 67 (546)
++.|...+..+.+.|+.++|...|++|+.. |.
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~ 244 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SD 244 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CC
Confidence 556777777777888888888888888888 84
No 277
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.54 E-value=0.032 Score=61.57 Aligned_cols=60 Identities=15% Similarity=0.136 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHh
Q psy11688 69 IYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAV 128 (546)
Q Consensus 69 ~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~ka 128 (546)
..+..-+.-++..|+|+-|++.+++|+.+-|.....|+.|+.||..+|+|+.|+-.++.+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 355666777888999999999999999999999999999999999999999999888766
No 278
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=95.43 E-value=0.054 Score=52.79 Aligned_cols=73 Identities=16% Similarity=0.023 Sum_probs=39.7
Q ss_pred cccccccccchhH---------hhHHHHHHHhCCCCCCCCeeeeccccccC-C---ChHHHHHHHhhhhh---cCCCeEE
Q psy11688 189 AKFTVCGDIHGQF---------YDLMNIFELNGLPSPDNPYLFNGDFVDRG-S---FSVECIFTLFGFKL---LYPNHFF 252 (546)
Q Consensus 189 ~~~~viGDihg~~---------~~l~~il~~~~~~~~~~~~~~lGD~vdrG-~---~~~e~l~~l~~l~~---~~p~~v~ 252 (546)
-+++++||+|... ..+.+.+...-.....+.++++||++... . ...+....+..+.. ..+-.++
T Consensus 7 ~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 86 (313)
T 1ute_A 7 LRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWH 86 (313)
T ss_dssp EEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEE
T ss_pred eEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCCEE
Confidence 3588999999752 23333333210112346799999986431 1 11133333222211 1134699
Q ss_pred EEccccccc
Q psy11688 253 MARGNHESA 261 (546)
Q Consensus 253 ~lrGNHE~~ 261 (546)
.+.||||..
T Consensus 87 ~v~GNHD~~ 95 (313)
T 1ute_A 87 VLAGNHDHL 95 (313)
T ss_dssp ECCCHHHHH
T ss_pred EECCCCccC
Confidence 999999975
No 279
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=94.70 E-value=0.028 Score=52.21 Aligned_cols=64 Identities=8% Similarity=-0.164 Sum_probs=37.7
Q ss_pred hhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 461 AQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 461 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
..+|+|+.+. .+..+.+......-+-.|+.||++|+|....+...++-.++.. +..++.++|||
T Consensus 10 ~iSD~H~~~~--~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~-~~pv~~v~GNH 73 (228)
T 1uf3_A 10 ATSNPMGDLE--ALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQ 73 (228)
T ss_dssp EEECCTTCHH--HHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTT
T ss_pred EEeeccCCHH--HHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEECCCC
Confidence 4578887643 2333332211112246899999999996555444444444432 23399999999
No 280
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.69 E-value=0.31 Score=51.47 Aligned_cols=95 Identities=8% Similarity=0.083 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHH--hCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHH
Q psy11688 37 KLKAEANEHFKNQAYNKAIELYSAAIE--VNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQ-TYTKAYYRRAAAYM 113 (546)
Q Consensus 37 ~~~~~g~~~~~~g~~~~Ai~~~~~al~--~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p-~~~~a~~~lg~~~~ 113 (546)
.+...-..+.+.|+.++|.+.|++..+ +.|+...|..+-.+|.+.|+.++|.+.+++..+..- -+...|..+-.+|.
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~ 186 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSM 186 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Confidence 345556678899999999999998876 467888999999999999999999999999887642 24566888899999
Q ss_pred HhcChHHHHHHHHHhhcc
Q psy11688 114 SLGKFKLALRDYEAVHKA 131 (546)
Q Consensus 114 ~~g~~~eA~~~~~kal~l 131 (546)
+.|+.++|.+.+++.-+.
T Consensus 187 ~~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 187 DTKNADKVYKTLQRLRDL 204 (501)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHh
Confidence 999999999999987654
No 281
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=94.35 E-value=0.012 Score=60.01 Aligned_cols=43 Identities=21% Similarity=0.241 Sum_probs=30.3
Q ss_pred CCCeeeecccc-ccCCChHHHHH----HHhhhhhcCCCeEEEEccccccc
Q psy11688 217 DNPYLFNGDFV-DRGSFSVECIF----TLFGFKLLYPNHFFMARGNHESA 261 (546)
Q Consensus 217 ~~~~~~lGD~v-drG~~~~e~l~----~l~~l~~~~p~~v~~lrGNHE~~ 261 (546)
.+.+++.||++ |++..+.+... .+..|... -.+++++||||..
T Consensus 44 ~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~--~~v~~i~GNHD~~ 91 (379)
T 3tho_B 44 VDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT--APVVVLPGNQDWK 91 (379)
T ss_dssp CSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH--SCEEECCCTTSCT
T ss_pred CCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC--CCEEEEcCCCccc
Confidence 46799999999 88876655443 33344332 3599999999953
No 282
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.27 E-value=0.47 Score=45.20 Aligned_cols=62 Identities=18% Similarity=0.150 Sum_probs=56.2
Q ss_pred HHHHHccCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHH
Q psy11688 43 NEHFKNQAYNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKA 104 (546)
Q Consensus 43 ~~~~~~g~~~~Ai~~~~~al~~~p-~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a 104 (546)
..+++.|+.++|+......|+.+| |+.....+...+.-.|+++.|.+-++.+.+++|+....
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH
Confidence 457889999999999999999999 68888889999999999999999999999999987553
No 283
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=94.10 E-value=0.042 Score=50.10 Aligned_cols=58 Identities=12% Similarity=-0.041 Sum_probs=37.8
Q ss_pred hHhhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 459 YKAQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 459 f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
+-..+|+|+.+ ..+.++++......-...+++||++|. +++..|..+ +..++.++|||
T Consensus 28 i~~iSD~Hg~~--~~l~~~l~~~~~~~~D~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNh 85 (190)
T 1s3l_A 28 IGIMSDTHDHL--PNIRKAIEIFNDENVETVIHCGDFVSL-----FVIKEFENL----NANIIATYGNN 85 (190)
T ss_dssp EEEECCCTTCH--HHHHHHHHHHHHSCCSEEEECSCCCST-----HHHHHGGGC----SSEEEEECCTT
T ss_pred EEEEeeCCCCH--HHHHHHHHHHhhcCCCEEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCC
Confidence 34578999874 335555544322233568999999984 555555432 33599999999
No 284
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.07 E-value=0.54 Score=41.39 Aligned_cols=96 Identities=11% Similarity=-0.014 Sum_probs=74.8
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH--Hh---------------CCCc
Q psy11688 39 KAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAI--EL---------------DQTY 101 (546)
Q Consensus 39 ~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al--~l---------------~p~~ 101 (546)
...+..++-.|.|..|+-.+.+ .....+.+..+.||.++++|..|+...++.+ +. ||.+
T Consensus 37 lL~~I~LyyngEY~R~Lf~L~~----lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~D 112 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHLHK----LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGD 112 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT----CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTC
T ss_pred hhhhhhhhhcchHhHHHHHHHh----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccch
Confidence 4467788888999888776422 2247778888999999999999999999999 22 3445
Q ss_pred HHH-HHHHHHHHHHhcChHHHHHHHHHhhccCCCCcch
Q psy11688 102 TKA-YYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA 138 (546)
Q Consensus 102 ~~a-~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~ 138 (546)
-+. +..+|..+...|+-+||+..|.......|--+.+
T Consensus 113 kEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~v 150 (242)
T 3kae_A 113 EEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPV 150 (242)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchH
Confidence 554 4556999999999999999999998888754443
No 285
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=93.92 E-value=0.45 Score=50.19 Aligned_cols=82 Identities=10% Similarity=0.144 Sum_probs=71.3
Q ss_pred cCHHHHHHHHHHHHH--hCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHhcChHHHHHH
Q psy11688 49 QAYNKAIELYSAAIE--VNPTAIYYANRSFAYLKTEAIGYALNDASKAIELD--QTYTKAYYRRAAAYMSLGKFKLALRD 124 (546)
Q Consensus 49 g~~~~Ai~~~~~al~--~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~--p~~~~a~~~lg~~~~~~g~~~eA~~~ 124 (546)
++.++|.+.|++..+ +.||...|..+-.+|.+.|+.++|++.+++..+.. | +...|..+-.+|.+.|+.++|.+.
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~~~g~~~~A~~l 162 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFCRKGDADKAYEV 162 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHHHCCCHHHHHHH
Confidence 447889999988766 46789999999999999999999999999988764 4 567788888999999999999999
Q ss_pred HHHhhcc
Q psy11688 125 YEAVHKA 131 (546)
Q Consensus 125 ~~kal~l 131 (546)
|++..+.
T Consensus 163 ~~~M~~~ 169 (501)
T 4g26_A 163 DAHMVES 169 (501)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9998765
No 286
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=93.84 E-value=0.038 Score=56.94 Aligned_cols=53 Identities=26% Similarity=0.285 Sum_probs=35.0
Q ss_pred cccccccccchh------------HhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHHHhh
Q psy11688 189 AKFTVCGDIHGQ------------FYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFG 242 (546)
Q Consensus 189 ~~~~viGDihg~------------~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~l~~ 242 (546)
-+++.++|+|-. ...+.++++.+.. ...+.+++.||++|++..+.+++..+..
T Consensus 33 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~-~~~D~VliaGDlfd~~~~~~~~~~~~~~ 97 (431)
T 3t1i_A 33 FKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQE-NEVDFILLGGDLFHENKPSRKTLHTCLE 97 (431)
T ss_dssp EEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHH-TTCSEEEECSCCBSSSSCCHHHHHHHHH
T ss_pred EEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhh-cCCCEEEEcCccccCCCCCHHHHHHHHH
Confidence 357888898842 2244555554432 2456799999999999887776664443
No 287
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=93.71 E-value=0.045 Score=56.77 Aligned_cols=49 Identities=18% Similarity=0.309 Sum_probs=34.6
Q ss_pred ccccccccchh------------HhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHH
Q psy11688 190 KFTVCGDIHGQ------------FYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFT 239 (546)
Q Consensus 190 ~~~viGDihg~------------~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~ 239 (546)
+++.++|+|-. ...+.++++.+... ..+.+++.||++|++..+.+++..
T Consensus 78 rilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~-~~D~VliaGDLfd~~~ps~~a~~~ 138 (472)
T 4fbk_A 78 RILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER-DVDMILLGGDIFHDNKPSRKALYQ 138 (472)
T ss_dssp EEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCSBSSSSCCHHHHHH
T ss_pred EEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhc-CCCEEEEcCccccCCCCCHHHHHH
Confidence 47888999853 23456666554322 456799999999999988877653
No 288
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.63 E-value=0.2 Score=55.34 Aligned_cols=62 Identities=18% Similarity=0.127 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q psy11688 34 RAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQ 99 (546)
Q Consensus 34 ~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p 99 (546)
.+.-+..++..+..+|+|+-|+.+.++|+...|+ ...|+.+|.+|..+|+|+.|+-. |.--|
T Consensus 336 ~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLt----LNScP 398 (754)
T 4gns_B 336 MSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFA----INSMP 398 (754)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHH----HHHSC
T ss_pred chHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHH----HhcCC
Confidence 3456777888899999999999999999999995 99999999999999999999865 44446
No 289
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=93.45 E-value=0.054 Score=55.61 Aligned_cols=50 Identities=18% Similarity=0.298 Sum_probs=34.9
Q ss_pred cccccccccchh------------HhhHHHHHHHhCCCCCCCCeeeeccccccCCChHHHHHH
Q psy11688 189 AKFTVCGDIHGQ------------FYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFT 239 (546)
Q Consensus 189 ~~~~viGDihg~------------~~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~e~l~~ 239 (546)
-+++.++|+|-. ...+.++++.+... ..+.+++.||++|++..+.+++..
T Consensus 14 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~-~~D~VliaGDLfd~~~p~~~~~~~ 75 (417)
T 4fbw_A 14 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER-DVDMILLGGDIFHDNKPSRKALYQ 75 (417)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCCBSSSSCCHHHHHH
T ss_pred eEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhc-CCCEEEEcCccccCCCCCHHHHHH
Confidence 357788888853 23456666654322 456799999999999988876654
No 290
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=92.97 E-value=0.089 Score=54.27 Aligned_cols=71 Identities=18% Similarity=0.195 Sum_probs=42.7
Q ss_pred cccccccccchhHhhHHHHHHHh-CCCCCCCCeeeeccccccCCCh-------HHHHHHHhhhhhcCCCeEEEEcccccc
Q psy11688 189 AKFTVCGDIHGQFYDLMNIFELN-GLPSPDNPYLFNGDFVDRGSFS-------VECIFTLFGFKLLYPNHFFMARGNHES 260 (546)
Q Consensus 189 ~~~~viGDihg~~~~l~~il~~~-~~~~~~~~~~~lGD~vdrG~~~-------~e~l~~l~~l~~~~p~~v~~lrGNHE~ 260 (546)
-+++++||+|...... ++++.. ..+...+.++++||+++.+... .+....+..+... --++.+.||||.
T Consensus 120 ~~f~~igD~~~~~~~~-~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~--~P~~~v~GNHD~ 196 (424)
T 2qfp_A 120 YTFGLIGDLGQSFDSN-TTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAY--QPWIWTAGNHEI 196 (424)
T ss_dssp EEEEEECSCTTBHHHH-HHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTT--SCEEECCCHHHH
T ss_pred eEEEEEEeCCCCCChH-HHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhc--CCeEeecCCccc
Confidence 3588999999765433 233332 2222456799999999764311 1222333333332 348999999997
Q ss_pred ch
Q psy11688 261 AY 262 (546)
Q Consensus 261 ~~ 262 (546)
..
T Consensus 197 ~~ 198 (424)
T 2qfp_A 197 EF 198 (424)
T ss_dssp CC
T ss_pred cc
Confidence 63
No 291
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=92.73 E-value=0.04 Score=52.41 Aligned_cols=40 Identities=8% Similarity=0.140 Sum_probs=24.1
Q ss_pred HhhCcchhhhH-HHHHHHHHHhcCCCCCcceeeccccCCCCCch
Q psy11688 460 KAQGKLHRKYA-YRILMDIKKKKILNLDFTQLFNGDFVDRGSFS 502 (546)
Q Consensus 460 ~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~ 502 (546)
-...|+|+.+. +.-+++..+. ..-+-.|+.||++|+|..+
T Consensus 9 ~~iSDlH~~~~~~~~~l~~~~~---~~~D~vi~~GDl~~~~~~~ 49 (260)
T 2yvt_A 9 LAIKNFKERFDLLPKLKGVIAE---KQPDILVVVGNILKNEALE 49 (260)
T ss_dssp EEEECCTTCGGGHHHHHHHHHH---HCCSEEEEESCCCCCHHHH
T ss_pred EEEeecCCChHHHHHHHHHHHh---cCCCEEEECCCCCCccCcc
Confidence 34678887653 2223333222 1235689999999999753
No 292
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=92.17 E-value=4.1 Score=35.86 Aligned_cols=68 Identities=12% Similarity=0.067 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH----hCC--------------C-HHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIE----VNP--------------T-AIYYANRSFAYLKTEAIGYALNDASKAI 95 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~----~~p--------------~-~~a~~nla~~~~~~g~~~~Al~~~~~al 95 (546)
+.+.+-++.++.+.++|..|+...++.++ .+| + .--+.-+|..+.+.|+-++|+.++....
T Consensus 62 ~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf 141 (242)
T 3kae_A 62 CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSF 141 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhc
Confidence 45667789999999999999999999993 233 2 3456678999999999999999999988
Q ss_pred HhCCCcH
Q psy11688 96 ELDQTYT 102 (546)
Q Consensus 96 ~l~p~~~ 102 (546)
..+|-.+
T Consensus 142 ~~~~lf~ 148 (242)
T 3kae_A 142 GKSFLFS 148 (242)
T ss_dssp HHCCCHH
T ss_pred CCccccc
Confidence 7665433
No 293
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=92.15 E-value=0.11 Score=47.25 Aligned_cols=38 Identities=13% Similarity=-0.041 Sum_probs=31.0
Q ss_pred CcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 486 DFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 486 ~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
....+++||++++|+...+++.+|-.++ ..+++++|||
T Consensus 44 ~D~vi~~GDl~~~~~~~~~~~~~l~~l~----~~~~~v~GNh 81 (195)
T 1xm7_A 44 EDTLYHLGDFTWHFNDKNEYLRIWKALP----GRKILVMGNH 81 (195)
T ss_dssp TCEEEECSCCBSCSCCTTSHHHHHHHSS----SEEEEECCTT
T ss_pred CCEEEECCCCCCCchhHHHHHHHHHHCC----CCEEEEeCCC
Confidence 3578999999999977778877777654 2499999999
No 294
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=91.94 E-value=0.12 Score=53.30 Aligned_cols=71 Identities=18% Similarity=0.151 Sum_probs=41.0
Q ss_pred cccccccccchhHhhHHHHHHHh-CCCCCCCCeeeeccccccCCC-----h-H-HHHHHHhhhhhcCCCeEEEEcccccc
Q psy11688 189 AKFTVCGDIHGQFYDLMNIFELN-GLPSPDNPYLFNGDFVDRGSF-----S-V-ECIFTLFGFKLLYPNHFFMARGNHES 260 (546)
Q Consensus 189 ~~~~viGDihg~~~~l~~il~~~-~~~~~~~~~~~lGD~vdrG~~-----~-~-e~l~~l~~l~~~~p~~v~~lrGNHE~ 260 (546)
-+++++||+|..... .++++.. ..+.+.+.++++||++..+.. . . +....+..+... --++.+.||||.
T Consensus 127 ~~f~~~gD~~~~~~~-~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~--~P~~~v~GNHD~ 203 (426)
T 1xzw_A 127 YVFGLIGDIGQTHDS-NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAY--QPWIWTAGNHEI 203 (426)
T ss_dssp EEEEEECSCTTBHHH-HHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTT--SCEECCCCGGGC
T ss_pred eEEEEEEeCCCCCch-HHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhc--CCEEEecccccc
Confidence 358899999975422 2222222 122245679999999965322 1 1 122333334332 348999999998
Q ss_pred ch
Q psy11688 261 AY 262 (546)
Q Consensus 261 ~~ 262 (546)
..
T Consensus 204 ~~ 205 (426)
T 1xzw_A 204 DY 205 (426)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 295
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=91.68 E-value=0.43 Score=50.14 Aligned_cols=78 Identities=12% Similarity=-0.047 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcchhcccccchh
Q psy11688 70 YYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147 (546)
Q Consensus 70 a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~ 147 (546)
.+..+|....-...++.|..+|.+|+.+.|++..+|..+|.+....|+.-+|+-+|-|++....-.+.+..++.....
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 445667777677777888888888888888888888888888888888888888888888765555666555554443
No 296
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=90.47 E-value=1.1 Score=47.07 Aligned_cols=80 Identities=11% Similarity=0.014 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q psy11688 36 EKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMS 114 (546)
Q Consensus 36 ~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 114 (546)
.-+..+|....-+..++.|..+|.+|+.++|+ ..+|..+|.+....++.-+|+-+|.+++....-++.|.-++...+..
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 35677899888889999999999999999996 89999999999999999999999999999888899999999887765
Q ss_pred h
Q psy11688 115 L 115 (546)
Q Consensus 115 ~ 115 (546)
.
T Consensus 233 ~ 233 (497)
T 1ya0_A 233 A 233 (497)
T ss_dssp H
T ss_pred H
Confidence 3
No 297
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=89.93 E-value=0.099 Score=47.02 Aligned_cols=58 Identities=17% Similarity=0.095 Sum_probs=35.5
Q ss_pred HhhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 460 KAQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 460 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
-...|+|+.-....|.++++... ..-+..+++||++|+ |++..|-.+. . .++.++|||
T Consensus 26 ~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-----~~~~~l~~~~--~--~v~~V~GNh 83 (178)
T 2kkn_A 26 LLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-----DTVILLEKFS--K--EFYGVHGNM 83 (178)
T ss_dssp EEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-----HHHHHHHHHT--S--SEEECCCSS
T ss_pred EEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-----HHHHHHHhcC--C--CEEEEECCC
Confidence 35677775111112333333222 223568999999984 7777777653 2 399999999
No 298
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=89.25 E-value=2.6 Score=42.68 Aligned_cols=91 Identities=12% Similarity=0.019 Sum_probs=73.6
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHh----CCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC---CCcH----HHH
Q psy11688 40 AEANEHFKNQAYNKAIELYSAAIEV----NPT---AIYYANRSFAYLKTEAIGYALNDASKAIELD---QTYT----KAY 105 (546)
Q Consensus 40 ~~g~~~~~~g~~~~Ai~~~~~al~~----~p~---~~a~~nla~~~~~~g~~~~Al~~~~~al~l~---p~~~----~a~ 105 (546)
.+|..|+..|+|.+|+..+.+..+- +.. -+.+.....+|..++++.++.+.+++|.... +..+ ...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 6789999999999999999998873 222 6788899999999999999999999987553 1122 234
Q ss_pred HHHHHHHH-HhcChHHHHHHHHHhhc
Q psy11688 106 YRRAAAYM-SLGKFKLALRDYEAVHK 130 (546)
Q Consensus 106 ~~lg~~~~-~~g~~~eA~~~~~kal~ 130 (546)
..-|..+. ..++|++|...|-++++
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 45588899 89999999999998864
No 299
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=88.97 E-value=0.29 Score=45.31 Aligned_cols=57 Identities=12% Similarity=0.116 Sum_probs=35.8
Q ss_pred hHhhCcchhhhH----HHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 459 YKAQGKLHRKYA----YRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 459 f~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
+-...|+|+.+. ...+.++++ ...-+..+++||++| .|++..|-.+. ..+++++|||
T Consensus 28 i~~iSD~H~~~~~~~l~~~l~~~~~---~~~~D~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~GNH 88 (215)
T 2a22_A 28 VLLIGDLKIPYGAKELPSNFRELLA---TDKINYVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSGDL 88 (215)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHH---CTTCCEEEECSCCCC-----HHHHHHHHHHC----SCEEECCCTT
T ss_pred EEEEecCCCCCChHHHHHHHHHHHh---cCCCCEEEECCCCCC-----HHHHHHHHHcC----CCEEEecCCC
Confidence 345567776431 122333332 222356899999998 57777776654 2499999999
No 300
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=88.92 E-value=0.76 Score=43.75 Aligned_cols=61 Identities=16% Similarity=-0.003 Sum_probs=56.6
Q ss_pred HHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcc
Q psy11688 77 AYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKD 137 (546)
Q Consensus 77 ~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~ 137 (546)
..++.|+.++|++.....++.+|.+...-..+-+.+.-.|+++.|.+.++.+.+++|+...
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 4567899999999999999999999999999999999999999999999999999997554
No 301
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.14 E-value=2.5 Score=46.52 Aligned_cols=58 Identities=19% Similarity=0.202 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHH--------HHhCCCcHHHHHHHHHHHHHhcChHHHHHHH
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKA--------IELDQTYTKAYYRRAAAYMSLGKFKLALRDY 125 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~a--------l~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~ 125 (546)
...|.++|..+++.++++.|+..|.++ +....++.+.+..++......|++..|...|
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~ 746 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAY 746 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHH
Confidence 566666777777777777766666653 1112334444444444444444444444443
No 302
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=88.13 E-value=0.35 Score=47.98 Aligned_cols=38 Identities=21% Similarity=0.140 Sum_probs=25.9
Q ss_pred ceeeccc-cCCCCCchHHHH----HHHHHhcccCCCcEEEEcCCC
Q psy11688 488 TQLFNGD-FVDRGSFSVECI----FTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 488 ~~~f~gd-~vdrg~~~~e~~----~~l~~~~~~~~~~~~~~rgnh 527 (546)
-.|+.|| ++|++.-+.+.+ ..|-.++-..| |+++.|||
T Consensus 64 ~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~~~p--v~~i~GNH 106 (336)
T 2q8u_A 64 LILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP--VVVLPGNH 106 (336)
T ss_dssp EEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHHSC--EEECCC--
T ss_pred EEEECCccccCCCCCCHHHHHHHHHHHHHHHhcCC--EEEECCCC
Confidence 5789999 999998877643 33444432245 99999999
No 303
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.99 E-value=1.1 Score=46.12 Aligned_cols=95 Identities=5% Similarity=-0.123 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCC--C--HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC---CCc---HHHHH
Q psy11688 37 KLKAEANEHFKNQAYNKAIELYSAAIEVNP--T--AIYYANRSFAYLKTEAIGYALNDASKAIELD---QTY---TKAYY 106 (546)
Q Consensus 37 ~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p--~--~~a~~nla~~~~~~g~~~~Al~~~~~al~l~---p~~---~~a~~ 106 (546)
++..+|..+++.|++++|++.|.++..... . ...+.....+++..+++..|...+.++-.+- ++. .....
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 356899999999999999999999887543 2 6888889999999999999999999987652 221 12344
Q ss_pred HHHHHHHHhcChHHHHHHHHHhhcc
Q psy11688 107 RRAAAYMSLGKFKLALRDYEAVHKA 131 (546)
Q Consensus 107 ~lg~~~~~~g~~~eA~~~~~kal~l 131 (546)
..|..+...++|.+|-+.|..++.-
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhChHHHHHHHHHHHhcc
Confidence 5577888899999999999887654
No 304
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=87.74 E-value=5 Score=45.59 Aligned_cols=95 Identities=11% Similarity=-0.063 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHH-----HhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCcHHHHHHH
Q psy11688 36 EKLKAEANEHFKNQAYNKAIELYSAAI-----EVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELD--QTYTKAYYRR 108 (546)
Q Consensus 36 ~~~~~~g~~~~~~g~~~~Ai~~~~~al-----~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~--p~~~~a~~~l 108 (546)
..+..+-+.+.+.|+.++|...+.+.- ...||...|..+-..|.+.|+.++|.+.|++..+.. | +...|..+
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P-DvvTYntL 206 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP-DLLSYAAA 206 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC-cHHHHHHH
Confidence 346667778999999999999997643 357899999999999999999999999999998754 5 55667777
Q ss_pred HHHHHHhcCh-HHHHHHHHHhhcc
Q psy11688 109 AAAYMSLGKF-KLALRDYEAVHKA 131 (546)
Q Consensus 109 g~~~~~~g~~-~eA~~~~~kal~l 131 (546)
-.++.+.|+. ++|.+.++++.+.
T Consensus 207 I~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 207 LQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHc
Confidence 7788888885 6788888877644
No 305
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=87.69 E-value=2.2 Score=43.12 Aligned_cols=62 Identities=15% Similarity=0.064 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEAIGYALNDASKAIE 96 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p-~~~a~~nla~~~~~~g~~~~Al~~~~~al~ 96 (546)
..+....+..+...|++++|+..+.+++..+| +..+|..+-.++...|+..+|++.|+++-+
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34555667788899999999999999999999 588999999999999999999999877654
No 306
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=86.13 E-value=0.87 Score=44.55 Aligned_cols=41 Identities=17% Similarity=0.197 Sum_probs=24.6
Q ss_pred cceeeccccCCCCCch-HHHHHHHH-HhcccCCCcEEEEcCCC
Q psy11688 487 FTQLFNGDFVDRGSFS-VECIFTLF-GFKLLYPNHFFMARVEC 527 (546)
Q Consensus 487 ~~~~f~gd~vdrg~~~-~e~~~~l~-~~~~~~~~~~~~~rgnh 527 (546)
.-.|++||++|.|... .+.+.-++ .+.-.....+++++|||
T Consensus 68 d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~~v~GNH 110 (330)
T 3ib7_A 68 DAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNH 110 (330)
T ss_dssp SEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEECCCTT
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEeCCCC
Confidence 4578999999999742 22222222 22111122399999999
No 307
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=85.80 E-value=0.27 Score=49.14 Aligned_cols=72 Identities=11% Similarity=-0.004 Sum_probs=39.8
Q ss_pred ccccccccchhHhh----HHHHHHHhCCCCCCCCeeeeccccccCCChH------HHHHHHhhhh-hcCCCeEEEEcccc
Q psy11688 190 KFTVCGDIHGQFYD----LMNIFELNGLPSPDNPYLFNGDFVDRGSFSV------ECIFTLFGFK-LLYPNHFFMARGNH 258 (546)
Q Consensus 190 ~~~viGDihg~~~~----l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~------e~l~~l~~l~-~~~p~~v~~lrGNH 258 (546)
+++++||.+..... ...+.+.+. ..+.+.++++||.++.|..+. +.++-+.... ....--++.+.|||
T Consensus 5 ~f~~igD~g~g~~~q~~va~~m~~~~~-~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlGNH 83 (342)
T 3tgh_A 5 RFASLGDWGKDTKGQILNAKYFKQFIK-NERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTR 83 (342)
T ss_dssp EEEECCSCBSCCHHHHHHHHHHHHHHH-HTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCCHH
T ss_pred EEEEEecCCCCCchHHHHHHHHHHHHh-hcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCCCC
Confidence 47889999853211 122222211 124567999999998776421 2222222111 12233579999999
Q ss_pred ccch
Q psy11688 259 ESAY 262 (546)
Q Consensus 259 E~~~ 262 (546)
|..-
T Consensus 84 D~~~ 87 (342)
T 3tgh_A 84 DWTG 87 (342)
T ss_dssp HHTS
T ss_pred ccCC
Confidence 9753
No 308
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.29 E-value=10 Score=38.89 Aligned_cols=99 Identities=9% Similarity=0.034 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHH-h---CCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHH---hCCCcH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIE-V---NPT---AIYYANRSFAYLKTEAIGYALNDASKAIE---LDQTYT 102 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~-~---~p~---~~a~~nla~~~~~~g~~~~Al~~~~~al~---l~p~~~ 102 (546)
+.+.-...++..+...|++.+|......... . .+. ...+......|+..+++.+|...++++.. -.+..+
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~ 214 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYE 214 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcH
Confidence 4566667889999999999999999888753 2 221 67888899999999999999999988742 233332
Q ss_pred ----HHHHHHHHHHHHhcChHHHHHHHHHhhcc
Q psy11688 103 ----KAYYRRAAAYMSLGKFKLALRDYEAVHKA 131 (546)
Q Consensus 103 ----~a~~~lg~~~~~~g~~~eA~~~~~kal~l 131 (546)
..+...|..+...++|.+|-++|..++..
T Consensus 215 ~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 215 SLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34566799999999999999999988753
No 309
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=83.27 E-value=0.54 Score=42.48 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=25.6
Q ss_pred CcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 486 DFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 486 ~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
-...+++||++| .|++..|-.++ ..++.++|||
T Consensus 41 ~d~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNh 73 (192)
T 1z2w_A 41 IQHILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDF 73 (192)
T ss_dssp CSEEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTT
T ss_pred CCEEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCc
Confidence 456889999997 57777776654 2599999999
No 310
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=83.21 E-value=0.87 Score=45.06 Aligned_cols=40 Identities=18% Similarity=-0.040 Sum_probs=26.4
Q ss_pred cceeeccccCCCCCchHHHHHH----HHHhcccCCCcEEEEcCCC
Q psy11688 487 FTQLFNGDFVDRGSFSVECIFT----LFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 487 ~~~~f~gd~vdrg~~~~e~~~~----l~~~~~~~~~~~~~~rgnh 527 (546)
+-.|+.||++|++.-+.+.+.. |-.++- .+..|+++.|||
T Consensus 42 D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~-~~~~v~~v~GNH 85 (333)
T 1ii7_A 42 DFILIAGDLFHSSRPSPGTLKKAIALLQIPKE-HSIPVFAIEGNH 85 (333)
T ss_dssp SEEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-TTCCEEEECCTT
T ss_pred CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-CCCcEEEeCCcC
Confidence 4678999999998655544332 223321 123499999999
No 311
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=83.00 E-value=0.6 Score=45.29 Aligned_cols=41 Identities=12% Similarity=-0.060 Sum_probs=25.2
Q ss_pred cceeeccccCCCCCc----hHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 487 FTQLFNGDFVDRGSF----SVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 487 ~~~~f~gd~vdrg~~----~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
.-.|++||++|.|.. +.+.+..++..-...+..+++++|||
T Consensus 53 d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~v~GNH 97 (322)
T 2nxf_A 53 QCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNH 97 (322)
T ss_dssp SEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHTTCSEEEECCCHH
T ss_pred CEEEECCCccCCCCCcchHHHHHHHHHHHHHHhcCCcEEEecCCC
Confidence 458999999999852 12332222222112244599999999
No 312
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=82.61 E-value=2 Score=40.55 Aligned_cols=38 Identities=21% Similarity=0.395 Sum_probs=24.3
Q ss_pred cceeeccccCCCCCch-HHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 487 FTQLFNGDFVDRGSFS-VECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 487 ~~~~f~gd~vdrg~~~-~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
.-.|+.||+++.|..+ .+.+.-++. ++..| ++.++|||
T Consensus 43 d~vi~~GDl~~~~~~~~~~~~~~~l~-~l~~p--~~~v~GNH 81 (274)
T 3d03_A 43 DAVVVSGDIVNCGRPEEYQVARQILG-SLNYP--LYLIPGNH 81 (274)
T ss_dssp SEEEEESCCBSSCCHHHHHHHHHHHT-TCSSC--EEEECCTT
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHH-hcCCC--EEEECCCC
Confidence 4579999999999753 222211211 12234 99999999
No 313
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=81.93 E-value=1.2 Score=45.00 Aligned_cols=40 Identities=10% Similarity=0.070 Sum_probs=26.5
Q ss_pred cceeeccccCCCCCchHHH----HHHHHHhcccCCCcEEEEcCCC
Q psy11688 487 FTQLFNGDFVDRGSFSVEC----IFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 487 ~~~~f~gd~vdrg~~~~e~----~~~l~~~~~~~~~~~~~~rgnh 527 (546)
+-.|+.||++|+|.-+.+. ...|-.++. .+..|++++|||
T Consensus 62 D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~-~~~pv~~v~GNH 105 (386)
T 3av0_A 62 DVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE-NNIKVYIVAGNH 105 (386)
T ss_dssp SEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH-TTCEEEECCCGG
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-cCCcEEEEcCCC
Confidence 4578999999999655443 233333332 123499999999
No 314
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=80.84 E-value=2.2 Score=44.23 Aligned_cols=25 Identities=16% Similarity=0.244 Sum_probs=21.0
Q ss_pred cceeeccccCCCCCchHHHHHHHHH
Q psy11688 487 FTQLFNGDFVDRGSFSVECIFTLFG 511 (546)
Q Consensus 487 ~~~~f~gd~vdrg~~~~e~~~~l~~ 511 (546)
.-.|+.||++|++.-+.+++..++.
T Consensus 117 D~VliaGDLfd~~~ps~~a~~~~~~ 141 (472)
T 4fbk_A 117 DMILLGGDIFHDNKPSRKALYQALR 141 (472)
T ss_dssp SEEEECSCSBSSSSCCHHHHHHHHH
T ss_pred CEEEEcCccccCCCCCHHHHHHHHH
Confidence 4589999999999999998876554
No 315
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=80.66 E-value=2.7 Score=43.96 Aligned_cols=69 Identities=12% Similarity=0.034 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------cHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCCCcch
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQT-------YTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA 138 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~-------~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~~~~~ 138 (546)
+..+..+-..|+..+.|+.|.....++. .|. ....+|.+|.++.-.++|.+|.+++..|++..|.+..+
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a 306 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKS 306 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSC
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhh
Confidence 7788888999999999999999999985 332 24567888999999999999999999999998876543
No 316
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=80.64 E-value=8.2 Score=42.32 Aligned_cols=84 Identities=14% Similarity=0.070 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMS 114 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 114 (546)
...|..+|..+.+.++++.|+++|.++=. +..+..++...++.+......+.+... .+... ...++..
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~~d-------~~~l~~l~~~~~~~~~~~~~~~~a~~~-~~~~~----A~~~~~~ 748 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNAHD-------LESLFLLHSSFNNKEGLVTLAKDAETT-GKFNL----AFNAYWI 748 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTC-------HHHHHHHHHHTTCHHHHHHHHHHHHHT-TCHHH----HHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHccC-------hhhhHHHHHHcCCHHHHHHHHHHHHHc-CchHH----HHHHHHH
Confidence 45788999999999999999999988632 223344444566666655544444443 22222 2335677
Q ss_pred hcChHHHHHHHHHhhc
Q psy11688 115 LGKFKLALRDYEAVHK 130 (546)
Q Consensus 115 ~g~~~eA~~~~~kal~ 130 (546)
+|++++|++.|.+.-+
T Consensus 749 ~g~~~~a~~~~~~~~~ 764 (814)
T 3mkq_A 749 AGDIQGAKDLLIKSQR 764 (814)
T ss_dssp HTCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHcCC
Confidence 8888888888876543
No 317
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=80.44 E-value=15 Score=32.44 Aligned_cols=47 Identities=9% Similarity=-0.057 Sum_probs=28.1
Q ss_pred HHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy11688 44 EHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKA 94 (546)
Q Consensus 44 ~~~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~a 94 (546)
...+.|+++.|.+..++. .+...|..+|...+..|+++-|..+|+++
T Consensus 14 LAL~lg~l~~A~e~a~~l----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL----NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH----CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHhcCCHHHHHHHHHHh----CCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 345556666666664432 23566666666666666666666666553
No 318
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.84 E-value=4.9 Score=46.80 Aligned_cols=90 Identities=19% Similarity=0.066 Sum_probs=70.9
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHh--------------------CC----CHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy11688 38 LKAEANEHFKNQAYNKAIELYSAAIEV--------------------NP----TAIYYANRSFAYLKTEAIGYALNDASK 93 (546)
Q Consensus 38 ~~~~g~~~~~~g~~~~Ai~~~~~al~~--------------------~p----~~~a~~nla~~~~~~g~~~~Al~~~~~ 93 (546)
-+.+|.+++..|++++|..+|.+|-.. .+ .+..|......+.+.+.++.|++..+.
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 488999999999999999999887321 11 145677778888889999999999999
Q ss_pred HHHhCCC-cH----HHHHHHHHHHHHhcChHHHHHHHHH
Q psy11688 94 AIELDQT-YT----KAYYRRAAAYMSLGKFKLALRDYEA 127 (546)
Q Consensus 94 al~l~p~-~~----~a~~~lg~~~~~~g~~~eA~~~~~k 127 (546)
|++..+. .. ..|.++=..+..+++|++|...+..
T Consensus 925 Ai~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 925 ADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp HHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred HHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 9987643 22 2577777888999999999777643
No 319
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=79.80 E-value=0.68 Score=49.10 Aligned_cols=66 Identities=24% Similarity=0.319 Sum_probs=40.6
Q ss_pred ccccccccchhHh----------------hHHHHHHHhCCCCCCCCeeeeccccccCCCh----------HHHHHHHhhh
Q psy11688 190 KFTVCGDIHGQFY----------------DLMNIFELNGLPSPDNPYLFNGDFVDRGSFS----------VECIFTLFGF 243 (546)
Q Consensus 190 ~~~viGDihg~~~----------------~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~----------~e~l~~l~~l 243 (546)
+++.++|+||.+. .+..+++......++..++..||.++.++.+ ..++..+..+
T Consensus 21 ~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ln~l 100 (527)
T 3qfk_A 21 AFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRM 100 (527)
T ss_dssp EEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHHHHT
T ss_pred EEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHHHhc
Confidence 3788999998763 4555666543322233456679999977443 3455555554
Q ss_pred hhcCCCeEEEEcccccc
Q psy11688 244 KLLYPNHFFMARGNHES 260 (546)
Q Consensus 244 ~~~~p~~v~~lrGNHE~ 260 (546)
. ++ ++..||||.
T Consensus 101 g---~D--~~t~GNHef 112 (527)
T 3qfk_A 101 A---FD--FGTLGNHEF 112 (527)
T ss_dssp C---CC--EECCCGGGG
T ss_pred C---Cc--EEecccccc
Confidence 3 22 455899994
No 320
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=79.52 E-value=2.2 Score=43.63 Aligned_cols=25 Identities=16% Similarity=0.244 Sum_probs=21.1
Q ss_pred cceeeccccCCCCCchHHHHHHHHH
Q psy11688 487 FTQLFNGDFVDRGSFSVECIFTLFG 511 (546)
Q Consensus 487 ~~~~f~gd~vdrg~~~~e~~~~l~~ 511 (546)
.-.|+.||++|++.-+.+++..++.
T Consensus 54 D~VliaGDLfd~~~p~~~~~~~~~~ 78 (417)
T 4fbw_A 54 DMILLGGDIFHDNKPSRKALYQALR 78 (417)
T ss_dssp SEEEECSCCBSSSSCCHHHHHHHHH
T ss_pred CEEEEcCccccCCCCCHHHHHHHHH
Confidence 4589999999999999998776654
No 321
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=79.38 E-value=20 Score=30.93 Aligned_cols=74 Identities=14% Similarity=-0.062 Sum_probs=60.6
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTK 103 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~ 103 (546)
......+.-|..-|.. ...++.++|.+.|+.|+.+... +..|...|.--.++|+..+|.+.+.+|+.+.|...+
T Consensus 55 ~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~ 129 (161)
T 4h7y_A 55 GQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE 129 (161)
T ss_dssp TTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH
T ss_pred ccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH
Confidence 3445555556555543 5668999999999999998544 899999999999999999999999999999997655
No 322
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=78.52 E-value=22 Score=27.76 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIE 63 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~ 63 (546)
.-.+.+..+..+|...-+.|+|++|+.+|..|++
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3445677888899999999999999999877765
No 323
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=78.14 E-value=5.1 Score=35.56 Aligned_cols=55 Identities=20% Similarity=0.194 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhh
Q psy11688 67 TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVH 129 (546)
Q Consensus 67 ~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal 129 (546)
|+..-+.+| ++.|+++.|.+.++.. ++...|-++|......|+++-|.++|.++-
T Consensus 7 D~~~rF~LA---L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 7 DPHIRFDLA---LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp CHHHHHHHH---HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred ChHHHHHHH---HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 444555554 4789999999987654 577889999999999999999999999864
No 324
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=77.67 E-value=2.3 Score=43.70 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=21.1
Q ss_pred cceeeccccCCCCCchHHHHHHHHHh
Q psy11688 487 FTQLFNGDFVDRGSFSVECIFTLFGF 512 (546)
Q Consensus 487 ~~~~f~gd~vdrg~~~~e~~~~l~~~ 512 (546)
.-.|+.||++|++..+.+++..+...
T Consensus 73 D~VliaGDlfd~~~~~~~~~~~~~~~ 98 (431)
T 3t1i_A 73 DFILLGGDLFHENKPSRKTLHTCLEL 98 (431)
T ss_dssp SEEEECSCCBSSSSCCHHHHHHHHHH
T ss_pred CEEEEcCccccCCCCCHHHHHHHHHH
Confidence 45789999999999988887766553
No 325
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=77.05 E-value=0.73 Score=40.90 Aligned_cols=52 Identities=10% Similarity=-0.053 Sum_probs=32.6
Q ss_pred HhhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCchHHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 460 KAQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 460 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
-..+|+|+.+ ..+.++++.... .-...+++||+.. +++.. ++ - .++.++|||
T Consensus 10 ~~isD~H~~~--~~~~~~~~~~~~-~~d~i~~~GD~~~------~~l~~---l~--~--~~~~v~GNh 61 (176)
T 3ck2_A 10 IVMSDSHGDS--LIVEEVRDRYVG-KVDAVFHNGDSEL------RPDSP---LW--E--GIRVVKGNM 61 (176)
T ss_dssp EEECCCTTCH--HHHHHHHHHHTT-TSSEEEECSCCCS------CTTCG---GG--T--TEEECCCTT
T ss_pred EEEecCCCCH--HHHHHHHHHhhc-CCCEEEECCCCch------HHHHh---hh--C--CeEEecCcc
Confidence 4568999874 446666655433 3457899999721 22211 11 1 499999999
No 326
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=76.63 E-value=23 Score=27.16 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIE 63 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~ 63 (546)
....+..+..+|..+-..|+|++|+.+|..|++
T Consensus 12 ~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 12 QSTAAATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344566777888888888888888888877765
No 327
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=75.90 E-value=2.3 Score=43.62 Aligned_cols=40 Identities=15% Similarity=0.156 Sum_probs=25.7
Q ss_pred cceeeccccCCCCCch--HHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 487 FTQLFNGDFVDRGSFS--VECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 487 ~~~~f~gd~vdrg~~~--~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
.-.|+.||+++.|... .++...|-.++ ..+..++.++|||
T Consensus 94 d~vi~~GDl~~~~~~~~~~~~~~~l~~l~-~~~~~~~~v~GNH 135 (443)
T 2xmo_A 94 DVLIISGDLTNNGEKTSHEELAKKLTQVE-KNGTQVFVVPGNH 135 (443)
T ss_dssp SEEEEESCCBSSCCHHHHHHHHHHHHHHH-HTTCEEEEECCTT
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHHH-hCCCeEEEECCcC
Confidence 4689999999999743 22223333332 1233499999999
No 328
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=75.15 E-value=2 Score=43.26 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=27.7
Q ss_pred cceeeccccC-CCCCchHHHHHH----HHHhcccCCCcEEEEcCCC
Q psy11688 487 FTQLFNGDFV-DRGSFSVECIFT----LFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 487 ~~~~f~gd~v-drg~~~~e~~~~----l~~~~~~~~~~~~~~rgnh 527 (546)
.-.|+.||++ |++..+.+.... |-.++-..| |++++|||
T Consensus 45 D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~--v~~i~GNH 88 (379)
T 3tho_B 45 DLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP--VVVLPGNQ 88 (379)
T ss_dssp SEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC--EEECCCTT
T ss_pred CEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC--EEEEcCCC
Confidence 4578999999 998877654433 333332344 99999999
No 329
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=74.92 E-value=3.7 Score=31.52 Aligned_cols=36 Identities=33% Similarity=0.242 Sum_probs=28.9
Q ss_pred ChhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy11688 28 SVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIE 63 (546)
Q Consensus 28 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~ 63 (546)
+....+.+..+..+|...-+.|+|++|+.+|.+|++
T Consensus 12 ~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 12 QVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345566778888888888999999999998887775
No 330
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=72.65 E-value=1.3 Score=46.78 Aligned_cols=66 Identities=20% Similarity=0.102 Sum_probs=39.6
Q ss_pred ccccccccchhHh----------hHHHHHHHhCCC----CCCCCeeeeccccccCCC-----hHHHHHHHhhhhhcCCCe
Q psy11688 190 KFTVCGDIHGQFY----------DLMNIFELNGLP----SPDNPYLFNGDFVDRGSF-----SVECIFTLFGFKLLYPNH 250 (546)
Q Consensus 190 ~~~viGDihg~~~----------~l~~il~~~~~~----~~~~~~~~lGD~vdrG~~-----~~e~l~~l~~l~~~~p~~ 250 (546)
+++.++|+||.+. .+..+++..... .+++.++..||+++..+. ...++..+..+. ++
T Consensus 10 ~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg---~d- 85 (516)
T 1hp1_A 10 TVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---YD- 85 (516)
T ss_dssp EEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---CC-
T ss_pred EEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC---CC-
Confidence 3788999999743 344444433110 123468889999875542 234455555553 33
Q ss_pred EEEEcccccc
Q psy11688 251 FFMARGNHES 260 (546)
Q Consensus 251 v~~lrGNHE~ 260 (546)
++..||||.
T Consensus 86 -~~~~GNHEf 94 (516)
T 1hp1_A 86 -AMAIGNHEF 94 (516)
T ss_dssp -EEECCGGGG
T ss_pred -EEeeccccc
Confidence 567899997
No 331
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=71.53 E-value=1.8 Score=46.05 Aligned_cols=67 Identities=18% Similarity=0.243 Sum_probs=40.3
Q ss_pred ccccccccchhH-----------------hhHHHHHHHhCCCCCCCCeeeeccccccCCCh-----HHHHHHHhhhhhcC
Q psy11688 190 KFTVCGDIHGQF-----------------YDLMNIFELNGLPSPDNPYLFNGDFVDRGSFS-----VECIFTLFGFKLLY 247 (546)
Q Consensus 190 ~~~viGDihg~~-----------------~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~-----~e~l~~l~~l~~~~ 247 (546)
+++.++|+||.+ ..+..+++......++..++..||+++..+.+ ..++..+..+.
T Consensus 31 ~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~lg--- 107 (552)
T 2z1a_A 31 TLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLR--- 107 (552)
T ss_dssp EEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHTT---
T ss_pred EEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhcC---
Confidence 378899999753 34555555432211223577889999976532 34444444443
Q ss_pred CCeEEEEccccccc
Q psy11688 248 PNHFFMARGNHESA 261 (546)
Q Consensus 248 p~~v~~lrGNHE~~ 261 (546)
++ ++..||||..
T Consensus 108 ~d--~~~lGNHEfd 119 (552)
T 2z1a_A 108 YR--AMALGNHEFD 119 (552)
T ss_dssp CC--EEECCGGGGT
T ss_pred CC--cccccccccc
Confidence 33 5678999964
No 332
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=71.31 E-value=11 Score=40.47 Aligned_cols=115 Identities=10% Similarity=-0.055 Sum_probs=59.0
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCC-C----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q psy11688 38 LKAEANEHFKNQAYNKAIELYSAAIEVNP-T----AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAY 112 (546)
Q Consensus 38 ~~~~g~~~~~~g~~~~Ai~~~~~al~~~p-~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 112 (546)
....+...+..++.+.|...+.+.....+ + ...+..+|...+..+...++...+.++....++........+.+
T Consensus 217 ~~~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~A- 295 (618)
T 1qsa_A 217 MAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMA- 295 (618)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHH-
Confidence 34445555566677777777766654332 2 12222233333333334456666666555444333333333443
Q ss_pred HHhcChHHHHHHHHHhhccCCCCcchhcccccchhhhhhhh
Q psy11688 113 MSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQ 153 (546)
Q Consensus 113 ~~~g~~~eA~~~~~kal~l~P~~~~~~~~l~~~~~~l~~~~ 153 (546)
...++++.|.+.+++.-.-.+......+.++......++.+
T Consensus 296 lr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~ 336 (618)
T 1qsa_A 296 LGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREA 336 (618)
T ss_dssp HHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHH
T ss_pred HHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHH
Confidence 34577777777776554433334455566666655554443
No 333
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=71.07 E-value=9.5 Score=31.33 Aligned_cols=34 Identities=26% Similarity=0.458 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIE 63 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~ 63 (546)
...+.+..+..+|...-..|+|++|+.+|..|++
T Consensus 13 ~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 13 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4566788888899888889999999999877765
No 334
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=71.02 E-value=21 Score=35.96 Aligned_cols=99 Identities=10% Similarity=0.052 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC----------------------CC-----------------------
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVN----------------------PT----------------------- 67 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~----------------------p~----------------------- 67 (546)
.+-.+...+|..|.++|++++-.+........- |+
T Consensus 17 ~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~f 96 (394)
T 3txn_A 17 IKEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTF 96 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678899999999999998877665433211 10
Q ss_pred --HHHHHHHHHHHHHccCHHHHHHHHHHHHHh----CC--CcHHHHHHHHHHHHHhcChHHHHHHHHHhhcc
Q psy11688 68 --AIYYANRSFAYLKTEAIGYALNDASKAIEL----DQ--TYTKAYYRRAAAYMSLGKFKLALRDYEAVHKA 131 (546)
Q Consensus 68 --~~a~~nla~~~~~~g~~~~Al~~~~~al~l----~p--~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l 131 (546)
...=..+|..|+..|+|.+|++.+.+.++- |. ...+.+.....+|..++++.++.+.|.+|.+.
T Consensus 97 lr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 97 LRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTT 168 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 001124566666677777776666666542 11 12345556666666677777776666666544
No 335
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=70.67 E-value=24 Score=27.16 Aligned_cols=35 Identities=23% Similarity=0.507 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT 67 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~ 67 (546)
+++..+...|..+++.++|.+|...|+++.....+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten 85 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSDN 85 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccC
Confidence 56778888899999999999999999998866554
No 336
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=70.13 E-value=6.8 Score=29.99 Aligned_cols=32 Identities=31% Similarity=0.284 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy11688 32 KERAEKLKAEANEHFKNQAYNKAIELYSAAIE 63 (546)
Q Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~ 63 (546)
.+.+..+..+|...-+.|+|++|+.+|.+|++
T Consensus 8 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 8 EDMARKYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 35666777778888888888888888777665
No 337
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=69.89 E-value=1.9 Score=45.79 Aligned_cols=65 Identities=22% Similarity=0.235 Sum_probs=40.3
Q ss_pred cccccccchhH--------------------hhHHHHHHHhCCCCCCCCeeeeccccccCCCh-----HHHHHHHhhhhh
Q psy11688 191 FTVCGDIHGQF--------------------YDLMNIFELNGLPSPDNPYLFNGDFVDRGSFS-----VECIFTLFGFKL 245 (546)
Q Consensus 191 ~~viGDihg~~--------------------~~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~-----~e~l~~l~~l~~ 245 (546)
++.+.|+||.+ ..+..+++......++..++..||.++..+.+ ..++..+..+.
T Consensus 28 Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ln~lg- 106 (546)
T 4h2g_A 28 ILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNALR- 106 (546)
T ss_dssp EEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHT-
T ss_pred EEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHHHhcC-
Confidence 78889999754 33455555442222234678899999977532 34555555554
Q ss_pred cCCCeEEEEcccccc
Q psy11688 246 LYPNHFFMARGNHES 260 (546)
Q Consensus 246 ~~p~~v~~lrGNHE~ 260 (546)
++ ++..||||.
T Consensus 107 --~d--~~~~GNHEf 117 (546)
T 4h2g_A 107 --YD--AMALGNHEF 117 (546)
T ss_dssp --CS--EEECCGGGG
T ss_pred --Cc--EEeccCccc
Confidence 23 466899996
No 338
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=68.67 E-value=3.8 Score=39.69 Aligned_cols=55 Identities=15% Similarity=0.034 Sum_probs=34.0
Q ss_pred hhCcchhhhHHHHHHHHHHhcCCCCCcceeeccccCCCCCch--HHHHHHHHHhcccCCCcEEEEcCCC
Q psy11688 461 AQGKLHRKYAYRILMDIKKKKILNLDFTQLFNGDFVDRGSFS--VECIFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 461 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~gd~vdrg~~~--~e~~~~l~~~~~~~~~~~~~~rgnh 527 (546)
...|+|+.... + ..+.-+-.|+.||++|+|..+ .+++.+|-.++ .| .++++.|||
T Consensus 64 ~iSD~H~~~~~--l-------~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~--~~-~v~~V~GNH 120 (296)
T 3rl5_A 64 CISDTRSRTDG--I-------QMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLP--YE-YKIVIAGNH 120 (296)
T ss_dssp EEBCCTTCCTT--C-------CCCSCSEEEECSCCSSSCCHHHHHHHHHHHHTSC--CS-EEEECCCTT
T ss_pred EEeeCCCCcch--h-------ccCCCCEEEECCcccCCCCHHHHHHHHHHHHhCC--CC-eEEEEcCCc
Confidence 55788887421 1 123346689999999999743 22333333322 22 489999999
No 339
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=66.00 E-value=11 Score=28.88 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=28.0
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIE 63 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~ 63 (546)
+..+.+..+..+|...-..|+|++|+.+|..|++
T Consensus 8 ~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 8 DFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3456777888889888899999999999888776
No 340
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=64.11 E-value=18 Score=28.10 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIE 63 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~ 63 (546)
--..|..+-.++..+.+.|+|++||++..+|..
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 334677778889999999999999998877653
No 341
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=63.12 E-value=8.7 Score=29.41 Aligned_cols=13 Identities=15% Similarity=0.092 Sum_probs=6.2
Q ss_pred HccCHHHHHHHHH
Q psy11688 80 KTEAIGYALNDAS 92 (546)
Q Consensus 80 ~~g~~~~Al~~~~ 92 (546)
+.|+|++|+..|.
T Consensus 31 ~~g~y~eAl~lY~ 43 (83)
T 2w2u_A 31 KEGNAEEAITNYK 43 (83)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HhccHHHHHHHHH
Confidence 4455555544443
No 342
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=62.88 E-value=3.4 Score=44.24 Aligned_cols=65 Identities=14% Similarity=0.027 Sum_probs=38.6
Q ss_pred cccccccchhHh---------------------hHHHHHHHhCCCCCCCCeeeeccccccCC-----ChHHHHHHHhhhh
Q psy11688 191 FTVCGDIHGQFY---------------------DLMNIFELNGLPSPDNPYLFNGDFVDRGS-----FSVECIFTLFGFK 244 (546)
Q Consensus 191 ~~viGDihg~~~---------------------~l~~il~~~~~~~~~~~~~~lGD~vdrG~-----~~~e~l~~l~~l~ 244 (546)
++.+.|+||.+. .+..+++......++..++..||.++..+ ....++..+..+.
T Consensus 15 Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~lg 94 (579)
T 3ztv_A 15 ILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVMNAGN 94 (579)
T ss_dssp EEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHHHHHT
T ss_pred EEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHHHhcC
Confidence 778899998743 34444444322122335777899998653 2344555555553
Q ss_pred hcCCCeEEEEcccccc
Q psy11688 245 LLYPNHFFMARGNHES 260 (546)
Q Consensus 245 ~~~p~~v~~lrGNHE~ 260 (546)
++ ++..||||.
T Consensus 95 ---~D--~~tlGNHEf 105 (579)
T 3ztv_A 95 ---FH--YFTLGNHEF 105 (579)
T ss_dssp ---CS--EEECCSGGG
T ss_pred ---cC--eeecccccc
Confidence 23 356899995
No 343
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=62.52 E-value=9 Score=29.30 Aligned_cols=12 Identities=17% Similarity=0.041 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHh
Q psy11688 53 KAIELYSAAIEV 64 (546)
Q Consensus 53 ~Ai~~~~~al~~ 64 (546)
+|+....+|++.
T Consensus 10 ~Ai~lv~~Ave~ 21 (83)
T 2v6y_A 10 MARKYAILAVKA 21 (83)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 455555555443
No 344
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=60.65 E-value=4.1 Score=39.14 Aligned_cols=68 Identities=19% Similarity=0.181 Sum_probs=38.9
Q ss_pred ccccccccchhHh--hHHHHHHHhCCCCCCCCeeeeccccccC-CChHHHHHHHhhhhhcCCCeEEEEccccccch
Q psy11688 190 KFTVCGDIHGQFY--DLMNIFELNGLPSPDNPYLFNGDFVDRG-SFSVECIFTLFGFKLLYPNHFFMARGNHESAY 262 (546)
Q Consensus 190 ~~~viGDihg~~~--~l~~il~~~~~~~~~~~~~~lGD~vdrG-~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~ 262 (546)
++..+||+||.-- .+...+++.......+.++..||-.--| +.+..+...+..+.. .+.. .||||.-.
T Consensus 6 ~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~----Da~T-lGNHefD~ 76 (281)
T 1t71_A 6 KFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGV----NYIT-MGNHTWFQ 76 (281)
T ss_dssp EEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTC----CEEE-CCTTTTCC
T ss_pred EEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCC----CEEE-EccCcccC
Confidence 4788999998642 2233333321110124567777665444 456677777777753 3444 59999643
No 345
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=57.40 E-value=1e+02 Score=30.15 Aligned_cols=26 Identities=15% Similarity=0.156 Sum_probs=21.6
Q ss_pred CcHHHHHHHHHHHHHhcChHHHHHHH
Q psy11688 100 TYTKAYYRRAAAYMSLGKFKLALRDY 125 (546)
Q Consensus 100 ~~~~a~~~lg~~~~~~g~~~eA~~~~ 125 (546)
.+++.+..+|..|.+-+++.+|...|
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 46777888888888888888888887
No 346
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=56.95 E-value=29 Score=25.75 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=24.8
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q psy11688 39 KAEANEHFKNQAYNKAIELYSAAIEVNPT 67 (546)
Q Consensus 39 ~~~g~~~~~~g~~~~Ai~~~~~al~~~p~ 67 (546)
..+|..+..+|++++|+.+|-+|+...|+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 46788888899999999999999998886
No 347
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=56.45 E-value=43 Score=38.79 Aligned_cols=90 Identities=14% Similarity=0.092 Sum_probs=64.8
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHH--------------------h--
Q psy11688 41 EANEHFKNQAYNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEAIGYALNDASKAIE--------------------L-- 97 (546)
Q Consensus 41 ~g~~~~~~g~~~~Ai~~~~~al~~~p-~~~a~~nla~~~~~~g~~~~Al~~~~~al~--------------------l-- 97 (546)
....+.+.+.++-|.+. +..-| ++..-+.+|.+++..|++++|.++|++|-. .
T Consensus 818 l~~~l~~~~~~~~~~~l----~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~ 893 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQL----IGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYH 893 (1139)
T ss_dssp HHHHHHHHSCTTHHHHH----HHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTT
T ss_pred HHHHHHHhhhHHHHHHH----hhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhccccccccccc
Confidence 34456666776655443 22333 466678999999999999999999988631 0
Q ss_pred -CCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCC
Q psy11688 98 -DQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 98 -~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
....+..|+.....+.+.+.++.+++..+.|++..+.
T Consensus 894 ~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~ 931 (1139)
T 4fhn_B 894 HQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKET 931 (1139)
T ss_dssp SCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCS
T ss_pred ccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccC
Confidence 1123456777788889999999999999999987654
No 348
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=50.83 E-value=46 Score=35.95 Aligned_cols=53 Identities=13% Similarity=0.015 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHH
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKL 120 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~e 120 (546)
......+|...+..|+|.-|.+..+.++..+|+|.+|...++.+|.++|.-.+
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~ 501 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAE 501 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 44566678888888999999999999999999999988888888888875443
No 349
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=50.80 E-value=5 Score=42.12 Aligned_cols=31 Identities=10% Similarity=0.053 Sum_probs=18.4
Q ss_pred HHHHHh-cCCcEEEEeccccccCceEeCCCeE
Q psy11688 366 KAFLER-NKLEYIIRSHEVKQDGYEVAHDGRC 396 (546)
Q Consensus 366 ~~fl~~-~~~~~iir~H~~~~~G~~~~~~~~~ 396 (546)
.++.+. .++++||-||+-....+-...++.+
T Consensus 217 ~~la~~~~giDlIlgGHtH~~~~~~~~~~~~~ 248 (509)
T 3ive_A 217 IQTASQVKGLDILITGHAHVGTPEPIKVGNTL 248 (509)
T ss_dssp HHHHHHCSSCCEEEEESSCCCCSSCEEETTEE
T ss_pred HHHHhcCCCCcEEEeCCcCccCCCCeeeCCEE
Confidence 444444 4899999999875333322334433
No 350
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=50.75 E-value=19 Score=36.63 Aligned_cols=35 Identities=11% Similarity=0.093 Sum_probs=27.7
Q ss_pred CcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCC
Q psy11688 100 TYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 100 ~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
....++..+|..|...|++++|.+.|.++......
T Consensus 129 e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~ 163 (429)
T 4b4t_R 129 EQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAIS 163 (429)
T ss_dssp CCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC
Confidence 34557888999999999999999999888765443
No 351
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=50.36 E-value=48 Score=28.15 Aligned_cols=51 Identities=10% Similarity=-0.068 Sum_probs=32.1
Q ss_pred ccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhcc
Q psy11688 81 TEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKA 131 (546)
Q Consensus 81 ~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l 131 (546)
+|+-++--..+...+.-++-+++..+.+|.+|.+.|+..+|.+.+.+|.+.
T Consensus 104 ~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 104 QGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp TTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 333333333333334445556888888888888888888888888877653
No 352
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=49.80 E-value=16 Score=36.98 Aligned_cols=39 Identities=15% Similarity=0.041 Sum_probs=24.2
Q ss_pred cceeeccccCCCCCc------hHHH-HHHHHHhcccCCCcEEEEcCCC
Q psy11688 487 FTQLFNGDFVDRGSF------SVEC-IFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 487 ~~~~f~gd~vdrg~~------~~e~-~~~l~~~~~~~~~~~~~~rgnh 527 (546)
.-.|++||+++.+.. ..+. ...+-.+....| ++...|||
T Consensus 149 D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P--~~~v~GNH 194 (424)
T 2qfp_A 149 QTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQP--WIWTAGNH 194 (424)
T ss_dssp CEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSC--EEECCCHH
T ss_pred CEEEEcCccccccccccccchHHHHHHHHHHHHHhcCC--eEeecCCc
Confidence 347899999987532 1121 222223333466 99999999
No 353
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=48.99 E-value=15 Score=28.76 Aligned_cols=13 Identities=23% Similarity=0.457 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHh
Q psy11688 52 NKAIELYSAAIEV 64 (546)
Q Consensus 52 ~~Ai~~~~~al~~ 64 (546)
+.|+....+|++.
T Consensus 13 ~~Ai~lv~~Ave~ 25 (93)
T 1wfd_A 13 TAAVAVLKRAVEL 25 (93)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4555555555544
No 354
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=48.96 E-value=7.4 Score=38.49 Aligned_cols=66 Identities=15% Similarity=0.178 Sum_probs=36.1
Q ss_pred cccccccchhHh----------------hHHHHHHHhCCCCCCCCeeeeccccccCCChH-------------HHHHHHh
Q psy11688 191 FTVCGDIHGQFY----------------DLMNIFELNGLPSPDNPYLFNGDFVDRGSFSV-------------ECIFTLF 241 (546)
Q Consensus 191 ~~viGDihg~~~----------------~l~~il~~~~~~~~~~~~~~lGD~vdrG~~~~-------------e~l~~l~ 241 (546)
++-..|+||.+. .+..+++......++..++..||.+...+.+. .++..+.
T Consensus 11 Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~~~~~~~~~~~~g~~~p~~~~mn 90 (339)
T 3jyf_A 11 IMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVYKAMN 90 (339)
T ss_dssp EEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHHHHHHHHHCCCTTCCCHHHHHHT
T ss_pred EEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchhHHhhhhcccccccchHHHHHHH
Confidence 667788888653 33444544322222335677999986433211 2344444
Q ss_pred hhhhcCCCeEEEEccccccc
Q psy11688 242 GFKLLYPNHFFMARGNHESA 261 (546)
Q Consensus 242 ~l~~~~p~~v~~lrGNHE~~ 261 (546)
.+. .+ + +..||||.-
T Consensus 91 ~lg---~D-~-~t~GNHEfd 105 (339)
T 3jyf_A 91 TLN---YA-V-GNLGNHEFN 105 (339)
T ss_dssp TSC---CS-E-EECCGGGGT
T ss_pred hcC---CC-E-Eecchhhhh
Confidence 443 22 3 446999963
No 355
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=47.24 E-value=6.2 Score=39.06 Aligned_cols=41 Identities=17% Similarity=0.340 Sum_probs=24.0
Q ss_pred cccccccchhHh----------------hHHHHHHHhCCCCCCCCeeeeccccccCC
Q psy11688 191 FTVCGDIHGQFY----------------DLMNIFELNGLPSPDNPYLFNGDFVDRGS 231 (546)
Q Consensus 191 ~~viGDihg~~~----------------~l~~il~~~~~~~~~~~~~~lGD~vdrG~ 231 (546)
++...|+||.+. .+..+++......++..++-.||.+...+
T Consensus 14 Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~ 70 (341)
T 3gve_A 14 ILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNP 70 (341)
T ss_dssp EEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSH
T ss_pred EEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcH
Confidence 677888988753 33444444321112335667899996543
No 356
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=47.20 E-value=21 Score=27.74 Aligned_cols=26 Identities=23% Similarity=0.290 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhh
Q psy11688 104 AYYRRAAAYMSLGKFKLALRDYEAVH 129 (546)
Q Consensus 104 a~~~lg~~~~~~g~~~eA~~~~~kal 129 (546)
.+-+++..+...|+|++|+++.++|.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 35566777777777777776666654
No 357
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=47.10 E-value=20 Score=29.36 Aligned_cols=12 Identities=50% Similarity=0.553 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHH
Q psy11688 52 NKAIELYSAAIE 63 (546)
Q Consensus 52 ~~Ai~~~~~al~ 63 (546)
+.|+.+..+|++
T Consensus 16 ~kAi~lv~~Ave 27 (117)
T 2cpt_A 16 QKAIDLASKAAQ 27 (117)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 345555555544
No 358
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=46.72 E-value=21 Score=37.32 Aligned_cols=70 Identities=16% Similarity=0.086 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----C---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc
Q psy11688 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP-----T---AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY 101 (546)
Q Consensus 30 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p-----~---~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~ 101 (546)
+....+.-+...-..|...+.|++|.....++. .| + ...++..|.++.-.++|.+|.+++..|++..|..
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 344556677777888999999999999999985 33 2 5668889999999999999999999999988754
No 359
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=44.33 E-value=1.3e+02 Score=30.53 Aligned_cols=69 Identities=12% Similarity=0.030 Sum_probs=56.7
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH----hCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIE----VNPT----AIYYANRSFAYLKTEAIGYALNDASKAIEL 97 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~----~~p~----~~a~~nla~~~~~~g~~~~Al~~~~~al~l 97 (546)
.+.....+.+......+...++|..|...++++-. ..+. ...+...|..+...++|.+|..+|..+.+.
T Consensus 171 ~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 171 MEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 45677889999999999999999999999998742 2222 567888899999999999999998887754
No 360
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=44.16 E-value=26 Score=26.62 Aligned_cols=16 Identities=6% Similarity=-0.022 Sum_probs=7.5
Q ss_pred HccCHHHHHHHHHHHH
Q psy11688 80 KTEAIGYALNDASKAI 95 (546)
Q Consensus 80 ~~g~~~~Al~~~~~al 95 (546)
..|+|++|+..|..++
T Consensus 25 ~~g~y~eAl~~Y~~ai 40 (85)
T 2v6x_A 25 TATQYEEAYTAYYNGL 40 (85)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHH
Confidence 3455555555444433
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=43.67 E-value=72 Score=36.11 Aligned_cols=88 Identities=15% Similarity=0.102 Sum_probs=62.8
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHH-h--------------------C
Q psy11688 41 EANEHFKNQAYNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEAIGYALNDASKAIE-L--------------------D 98 (546)
Q Consensus 41 ~g~~~~~~g~~~~Ai~~~~~al~~~p-~~~a~~nla~~~~~~g~~~~Al~~~~~al~-l--------------------~ 98 (546)
....+...|.++-|.+ .+.--| ++..-|.+|.+|+..|++++|.++|++|-. + .
T Consensus 816 l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e 891 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYH 891 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTT
T ss_pred HHHHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCccc
Confidence 4556667777765543 233344 455668899999999999999999987641 1 1
Q ss_pred CC--cHHHHHHHHHHHHHhcChHHHHHHHHHhhccC
Q psy11688 99 QT--YTKAYYRRAAAYMSLGKFKLALRDYEAVHKAR 132 (546)
Q Consensus 99 p~--~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~ 132 (546)
++ ....|......+...+-++-+++..+.|++.-
T Consensus 892 ~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~ 927 (950)
T 4gq2_M 892 HQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASK 927 (950)
T ss_dssp TCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred ccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc
Confidence 11 22366777888889999999999999999653
No 362
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=42.82 E-value=26 Score=35.47 Aligned_cols=39 Identities=13% Similarity=0.011 Sum_probs=23.6
Q ss_pred cceeeccccCCCCCc------hHHH-HHHHHHhcccCCCcEEEEcCCC
Q psy11688 487 FTQLFNGDFVDRGSF------SVEC-IFTLFGFKLLYPNHFFMARVEC 527 (546)
Q Consensus 487 ~~~~f~gd~vdrg~~------~~e~-~~~l~~~~~~~~~~~~~~rgnh 527 (546)
.-.|++||+++.+.. ..+. ...+-.+....| ++...|||
T Consensus 156 D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P--~~~v~GNH 201 (426)
T 1xzw_A 156 QAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQP--WIWTAGNH 201 (426)
T ss_dssp SEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSC--EECCCCGG
T ss_pred CEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCC--EEEecccc
Confidence 347899999976332 1111 222223333566 89999999
No 363
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=42.80 E-value=1.2e+02 Score=32.36 Aligned_cols=85 Identities=12% Similarity=-0.026 Sum_probs=60.9
Q ss_pred HHccCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHH
Q psy11688 46 FKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDY 125 (546)
Q Consensus 46 ~~~g~~~~Ai~~~~~al~~~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~ 125 (546)
+..+...+|...+.++....++.....-++...++.++++.|...+++.-.-....+++.|=+|.++..+|+.++|...|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~ 342 (618)
T 1qsa_A 263 MGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEIL 342 (618)
T ss_dssp CSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCChHHHHHHHhccccCCChHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHH
Confidence 33443456666777766554443333344444567899999999987765544456788888999999999999999999
Q ss_pred HHhhc
Q psy11688 126 EAVHK 130 (546)
Q Consensus 126 ~kal~ 130 (546)
+++.+
T Consensus 343 ~~~a~ 347 (618)
T 1qsa_A 343 HQLMQ 347 (618)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99875
No 364
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=41.66 E-value=93 Score=24.29 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=29.8
Q ss_pred hHHHHHHH----HHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Q psy11688 31 DKERAEKL----KAEANEHFKNQAYNKAIELYSAAIEVNPTA 68 (546)
Q Consensus 31 ~~~~a~~~----~~~g~~~~~~g~~~~Ai~~~~~al~~~p~~ 68 (546)
+++..+.+ ..+|..+..+|+++.|+.+|-+|+...|.+
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 44444444 567889999999999999999999988864
No 365
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=40.05 E-value=34 Score=32.15 Aligned_cols=65 Identities=17% Similarity=0.096 Sum_probs=39.7
Q ss_pred ccccccccchhH--hhHHHHHHHhCCCCCCCCeeeeccccccC-CChHHHHHHHhhhhhcCCCeEEEEccccccc
Q psy11688 190 KFTVCGDIHGQF--YDLMNIFELNGLPSPDNPYLFNGDFVDRG-SFSVECIFTLFGFKLLYPNHFFMARGNHESA 261 (546)
Q Consensus 190 ~~~viGDihg~~--~~l~~il~~~~~~~~~~~~~~lGD~vdrG-~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 261 (546)
++..+||+-|.. ..+...+....... +.++..|+-.--| +.+.+....+..+.. .+.. .||||.-
T Consensus 2 ~ilf~GDv~g~~G~~~~~~~l~~lr~~~--d~vi~nge~~~~G~g~~~~~~~~l~~~G~----Da~T-lGNHefD 69 (255)
T 1t70_A 2 RVLFIGDVFGQPGRRVLQNHLPTIRPQF--DFVIVNMENSAGGFGMHRDAARGALEAGA----GCLT-LGNHAWH 69 (255)
T ss_dssp EEEEECCBBHHHHHHHHHHHHHHHGGGC--SEEEEECTBTTTTSSCCHHHHHHHHHHTC----SEEE-CCTTTTS
T ss_pred EEEEEeccCChHHHHHHHHHHHHHHhhC--CEEEECCCCccCCcCCCHHHHHHHHhCCC----CEEE-ecccccc
Confidence 367899997654 44555666553222 5566666544444 556677777777653 3444 4999975
No 366
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=39.40 E-value=2.1e+02 Score=27.56 Aligned_cols=27 Identities=7% Similarity=-0.205 Sum_probs=18.9
Q ss_pred CcHHHHHHHHHHHHHhcChHHHHHHHH
Q psy11688 100 TYTKAYYRRAAAYMSLGKFKLALRDYE 126 (546)
Q Consensus 100 ~~~~a~~~lg~~~~~~g~~~eA~~~~~ 126 (546)
.+++.|..+|..|.+-+++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 355667777777777777777777664
No 367
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=39.07 E-value=31 Score=32.41 Aligned_cols=66 Identities=12% Similarity=0.051 Sum_probs=40.1
Q ss_pred ccccccccchh--HhhHHHHHHHhCCCCCCCCeeeec-cccccCCChHHHHHHHhhhhhcCCCeEEEEccccccch
Q psy11688 190 KFTVCGDIHGQ--FYDLMNIFELNGLPSPDNPYLFNG-DFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAY 262 (546)
Q Consensus 190 ~~~viGDihg~--~~~l~~il~~~~~~~~~~~~~~lG-D~vdrG~~~~e~l~~l~~l~~~~p~~v~~lrGNHE~~~ 262 (546)
++..+||+-|. ...+...+....... +.+++.| |....-..+.+....+..+.. .+. -.||||.-.
T Consensus 2 ~ilfiGDi~g~~G~~~v~~~l~~lr~~~--d~vi~ngen~~~G~g~~~~~~~~l~~~G~----D~~-T~GNHefD~ 70 (252)
T 2z06_A 2 RVLFIGDVMAEPGLRAVGLHLPDIRDRY--DLVIANGENAARGKGLDRRSYRLLREAGV----DLV-SLGNHAWDH 70 (252)
T ss_dssp EEEEECCBCHHHHHHHHHHHHHHHGGGC--SEEEEECTTTTTTSSCCHHHHHHHHHHTC----CEE-ECCTTTTSC
T ss_pred EEEEEEecCCcccHHHHHHHHHHHHhhC--CEEEEeCCCccCCCCcCHHHHHHHHhCCC----CEE-EeccEeeEC
Confidence 36789999654 345566666554332 4455544 655444466777777777753 344 459999654
No 368
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=38.86 E-value=26 Score=26.88 Aligned_cols=19 Identities=21% Similarity=0.144 Sum_probs=11.0
Q ss_pred HHHhcChHHHHHHHHHhhc
Q psy11688 112 YMSLGKFKLALRDYEAVHK 130 (546)
Q Consensus 112 ~~~~g~~~eA~~~~~kal~ 130 (546)
.-..|+|++|+.+|..+++
T Consensus 26 ~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 26 LDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 3455666666666665553
No 369
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=38.46 E-value=27 Score=26.31 Aligned_cols=27 Identities=19% Similarity=0.165 Sum_probs=22.7
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy11688 38 LKAEANEHFKNQAYNKAIELYSAAIEV 64 (546)
Q Consensus 38 ~~~~g~~~~~~g~~~~Ai~~~~~al~~ 64 (546)
...+|..+...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 355788888999999999999998873
No 370
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=37.27 E-value=9.2 Score=40.59 Aligned_cols=68 Identities=18% Similarity=0.193 Sum_probs=37.5
Q ss_pred ccccccccchhHh----------------hHHHHHHHhC-CCCCCCCeeeeccccccCC-------ChHHHHHHHhhhhh
Q psy11688 190 KFTVCGDIHGQFY----------------DLMNIFELNG-LPSPDNPYLFNGDFVDRGS-------FSVECIFTLFGFKL 245 (546)
Q Consensus 190 ~~~viGDihg~~~----------------~l~~il~~~~-~~~~~~~~~~lGD~vdrG~-------~~~e~l~~l~~l~~ 245 (546)
+++.++|+||.+. .+...++... ...++-.++..||.++..+ ....++..+..+.
T Consensus 17 ~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~lg- 95 (557)
T 3c9f_A 17 NFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQD- 95 (557)
T ss_dssp EEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTSC-
T ss_pred EEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHHhcC-
Confidence 3788999999643 2333344311 0111224678999997543 2223455555554
Q ss_pred cCCCeEEEEccccccch
Q psy11688 246 LYPNHFFMARGNHESAY 262 (546)
Q Consensus 246 ~~p~~v~~lrGNHE~~~ 262 (546)
.+ ++..||||...
T Consensus 96 --~D--a~tlGNHEfD~ 108 (557)
T 3c9f_A 96 --YD--LLTIGNHELYL 108 (557)
T ss_dssp --CS--EECCCGGGSSS
T ss_pred --CC--EEeecchhccc
Confidence 22 45579999753
No 371
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=36.62 E-value=65 Score=28.95 Aligned_cols=36 Identities=17% Similarity=0.094 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q psy11688 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP 66 (546)
Q Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p 66 (546)
..+.+.-.+..|..++.+++|.+|.+.+.+|++..|
T Consensus 10 ~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~ 45 (203)
T 3t5x_A 10 TAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCH 45 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCC
Confidence 344566667777777777777777777777777766
No 372
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=36.15 E-value=14 Score=38.97 Aligned_cols=54 Identities=22% Similarity=0.197 Sum_probs=30.2
Q ss_pred hHHHHHHHhCCCCCCCCeeeeccccccCCC-----hHHHHHHHhhhhhcCCCeEEEEccccccc
Q psy11688 203 DLMNIFELNGLPSPDNPYLFNGDFVDRGSF-----SVECIFTLFGFKLLYPNHFFMARGNHESA 261 (546)
Q Consensus 203 ~l~~il~~~~~~~~~~~~~~lGD~vdrG~~-----~~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 261 (546)
.+..++++.....++..++..||.+...+. ...++..+-.+.. =.+..||||.-
T Consensus 38 rlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~lgy-----Da~~lGNHEFd 96 (530)
T 4h1s_A 38 RLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNALRY-----DAMALGNHEFD 96 (530)
T ss_dssp HHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHHTTC-----CEEECCGGGGT
T ss_pred HHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhccCC-----CEEEEchhhhc
Confidence 344444443211223456778999976542 2345555555542 34668999973
No 373
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=34.83 E-value=66 Score=34.73 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHccCH
Q psy11688 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAI 84 (546)
Q Consensus 35 a~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p~-~~a~~nla~~~~~~g~~ 84 (546)
+++...+|..++..|+|.-|.+..+.++..+|+ ..+...+|.+|.++|.-
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 345778899999999999999999999999994 88888899888776643
No 374
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=34.39 E-value=2.1e+02 Score=24.23 Aligned_cols=61 Identities=11% Similarity=-0.078 Sum_probs=45.4
Q ss_pred HHHHHHH-HHHccCHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy11688 38 LKAEANE-HFKNQAYNKAIELYSAAIEV-NPTAIYYANRSFAYLKTEAIGYALNDASKAIELD 98 (546)
Q Consensus 38 ~~~~g~~-~~~~g~~~~Ai~~~~~al~~-~p~~~a~~nla~~~~~~g~~~~Al~~~~~al~l~ 98 (546)
++++|.. +..+|+-++--+.+...+.- .|++..+..+|.+|-++|+-.+|-+...+|.+..
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 4555554 45677767666666664443 3379999999999999999999999999998765
No 375
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.54 E-value=1.1e+02 Score=24.89 Aligned_cols=44 Identities=11% Similarity=0.009 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhccCCC
Q psy11688 83 AIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPN 134 (546)
Q Consensus 83 ~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~ 134 (546)
.|++|..+..+||++|-. |.--..+..|.+++..+++++.+..+
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhcccccc
Confidence 356666666666666531 22233333455566677777777664
No 376
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=33.26 E-value=41 Score=34.68 Aligned_cols=54 Identities=4% Similarity=0.149 Sum_probs=39.8
Q ss_pred cEEEEeccccccCceEe--CCCeEEEEeCCCCCCCCCCCceeEEEeeCCCCceeEEEEeec
Q psy11688 375 EYIIRSHEVKQDGYEVA--HDGRCITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEAV 433 (546)
Q Consensus 375 ~~iir~H~~~~~G~~~~--~~~~~itifsa~~y~~~~~n~~a~~~~~~~~~~~~~~~~~~~ 433 (546)
...+.|||.. -|.+.. .+++-+.+.|=|.|+. .|.++.|+-+++.++.++|...
T Consensus 407 hVyf~Gnq~~-f~t~~~~~~~~~~vrLv~VP~Fs~----T~~~vLvdl~tLe~~~v~f~~~ 462 (476)
T 3e0j_A 407 HVYFCGNTPS-FGSKIIRGPEDQTVLLVTVPDFSA----TQTACLVNLRSLACQPISFSGF 462 (476)
T ss_dssp SEEEEEEESS-CEEEEEECSSCCEEEEEEEECHHH----HCEEEEEETTTTBCCEEEEEEC
T ss_pred cEEEeCCCCc-cceeEEecCCCCeEEEEEcCCcCC----CCeEEEEECccccEEEEEEecc
Confidence 4568899885 455443 3566777888898864 5888888778899888888865
No 377
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=32.66 E-value=55 Score=24.25 Aligned_cols=29 Identities=10% Similarity=0.004 Sum_probs=20.2
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCcH
Q psy11688 74 RSFAYLKTEAIGYALNDASKAIELDQTYT 102 (546)
Q Consensus 74 la~~~~~~g~~~~Al~~~~~al~l~p~~~ 102 (546)
+|..+...|++++|+..+-+|+...|+-.
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~ 51 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCGQPQ 51 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 56667777777777777777777766543
No 378
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=30.66 E-value=60 Score=36.78 Aligned_cols=52 Identities=13% Similarity=0.060 Sum_probs=42.9
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHHHHHHHHHhh
Q psy11688 74 RSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVH 129 (546)
Q Consensus 74 la~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal 129 (546)
+...+...+.++-| ...+..-|.++..-|-+|.+|...|++++|.++|+||-
T Consensus 816 l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 55666778887754 34567778888888999999999999999999999975
No 379
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=30.56 E-value=2.1e+02 Score=24.62 Aligned_cols=31 Identities=0% Similarity=0.069 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q psy11688 36 EKLKAEANEHFKNQAYNKAIELYSAAIEVNP 66 (546)
Q Consensus 36 ~~~~~~g~~~~~~g~~~~Ai~~~~~al~~~p 66 (546)
..-+..|..+|..|+|=+|=+.++.+-...+
T Consensus 33 ~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~ 63 (161)
T 2ijq_A 33 RRAVVHGVRLYNSGEFHESHDCFEDEWYNYG 63 (161)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTTTC
T ss_pred cHHHHHHHHHHhCCCchHHHHHHHHHHHhcC
Confidence 3446788888889999999888888877654
No 380
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=27.84 E-value=54 Score=33.63 Aligned_cols=87 Identities=10% Similarity=0.047 Sum_probs=61.2
Q ss_pred cCHHHHHHHHHHHHHh-----C-------CC-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----------Cc
Q psy11688 49 QAYNKAIELYSAAIEV-----N-------PT-----AIYYANRSFAYLKTEAIGYALNDASKAIELDQ----------TY 101 (546)
Q Consensus 49 g~~~~Ai~~~~~al~~-----~-------p~-----~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p----------~~ 101 (546)
...++|.....++... + |. .....++-.+|+++++.+-|-..++..-...+ +.
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 3456777777777764 1 11 12234566788999999888777644332222 23
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHhhcc-CCCC
Q psy11688 102 TKAYYRRAAAYMSLGKFKLALRDYEAVHKA-RPND 135 (546)
Q Consensus 102 ~~a~~~lg~~~~~~g~~~eA~~~~~kal~l-~P~~ 135 (546)
....|.+|..+...++|.+|.+++..|++. .|.+
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 456888999999999999999999999998 7764
No 381
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=27.70 E-value=1.2e+02 Score=30.93 Aligned_cols=30 Identities=17% Similarity=-0.012 Sum_probs=23.0
Q ss_pred cHHHHHHHHHHHHHhcChHHHHHHHHHhhc
Q psy11688 101 YTKAYYRRAAAYMSLGKFKLALRDYEAVHK 130 (546)
Q Consensus 101 ~~~a~~~lg~~~~~~g~~~eA~~~~~kal~ 130 (546)
..-|+..+|.+|+.+++|++|.+..++++.
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 344677778888888888888888888775
No 382
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=27.01 E-value=2.4e+02 Score=28.79 Aligned_cols=63 Identities=11% Similarity=-0.007 Sum_probs=48.8
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHh--------CCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CCCc
Q psy11688 39 KAEANEHFKNQAYNKAIELYSAAIEV--------NPT---AIYYANRSFAYLKTEAIGYALNDASKAIEL-DQTY 101 (546)
Q Consensus 39 ~~~g~~~~~~g~~~~Ai~~~~~al~~--------~p~---~~a~~nla~~~~~~g~~~~Al~~~~~al~l-~p~~ 101 (546)
..+-..||+.++...|...++..-.. .|. ...+|.+|..++..++|.+|.+++..|++. .|..
T Consensus 180 n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 180 NKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 33445789999988888887543222 221 577899999999999999999999999998 7654
No 383
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=26.35 E-value=1.8e+02 Score=22.42 Aligned_cols=28 Identities=11% Similarity=0.022 Sum_probs=19.5
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCC
Q psy11688 39 KAEANEHFKNQAYNKAIELYSAAIEVNP 66 (546)
Q Consensus 39 ~~~g~~~~~~g~~~~Ai~~~~~al~~~p 66 (546)
+..|..+|..|+|=+|=+.++.+-...|
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~ 32 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKAT 32 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCC
Confidence 4456777777777777777777766655
No 384
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=26.35 E-value=55 Score=24.59 Aligned_cols=27 Identities=26% Similarity=0.395 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHhhcc
Q psy11688 105 YYRRAAAYMSLGKFKLALRDYEAVHKA 131 (546)
Q Consensus 105 ~~~lg~~~~~~g~~~eA~~~~~kal~l 131 (546)
...+|.=|..+|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 456788889999999999999988753
No 385
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=25.90 E-value=1.4e+02 Score=29.45 Aligned_cols=45 Identities=16% Similarity=0.092 Sum_probs=33.2
Q ss_pred HHHHHHHHHHh-----CCCcHHHHHHHHHHHHHhcChHHHHHHHHHhhcc
Q psy11688 87 ALNDASKAIEL-----DQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKA 131 (546)
Q Consensus 87 Al~~~~~al~l-----~p~~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l 131 (546)
+++.|.+|+.. +......|..+|..+++.+++.||++.+..|-..
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHH
Confidence 44444444432 3456778889999999999999999999887543
No 386
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=25.04 E-value=2.3e+02 Score=25.20 Aligned_cols=53 Identities=17% Similarity=0.002 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHH-----HHHHHHHhcChHH
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR-----RAAAYMSLGKFKL 120 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~-----lg~~~~~~g~~~e 120 (546)
....|.+|..++..++|.+|.+++..|++..|........ +-.+-.-+|+...
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~ 71 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT 71 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 5678899999999999999999999999998876544333 3334455787654
No 387
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=25.01 E-value=1.3e+02 Score=30.57 Aligned_cols=29 Identities=24% Similarity=0.180 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHhhc
Q psy11688 102 TKAYYRRAAAYMSLGKFKLALRDYEAVHK 130 (546)
Q Consensus 102 ~~a~~~lg~~~~~~g~~~eA~~~~~kal~ 130 (546)
.-|+..+|.+|+.+++|++|.+..++++.
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 44667777888888888888877777765
No 388
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=24.32 E-value=2e+02 Score=32.77 Aligned_cols=60 Identities=10% Similarity=0.077 Sum_probs=50.2
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHH--hCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhC
Q psy11688 39 KAEANEHFKNQAYNKAIELYSAAIE--VNPTAIYYANRSFAYLKTEA-IGYALNDASKAIELD 98 (546)
Q Consensus 39 ~~~g~~~~~~g~~~~Ai~~~~~al~--~~p~~~a~~nla~~~~~~g~-~~~Al~~~~~al~l~ 98 (546)
..+-..+.+.|+.++|.+.|++-.+ +.||...|..+-.++.+.|+ .++|.+.+++..+..
T Consensus 169 NtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 169 NAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Confidence 3334468899999999999999877 57899999999889999998 478889999988765
No 389
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=24.29 E-value=1.8e+02 Score=20.24 Aligned_cols=42 Identities=17% Similarity=0.168 Sum_probs=15.0
Q ss_pred HccCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHHhcChHHHH
Q psy11688 80 KTEAIGYALNDASKAIELDQTYTK-AYYRRAAAYMSLGKFKLAL 122 (546)
Q Consensus 80 ~~g~~~~Al~~~~~al~l~p~~~~-a~~~lg~~~~~~g~~~eA~ 122 (546)
-....++|....+ .++..++..+ +-.-+...+...|+|++|+
T Consensus 18 G~HcH~EA~tIA~-~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 18 GHHCHQEAASIAD-WLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp TTTCHHHHHHHHH-HHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred cchHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 3444555443322 2344443322 2334455566666666654
No 390
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=23.49 E-value=24 Score=37.44 Aligned_cols=36 Identities=17% Similarity=0.022 Sum_probs=23.8
Q ss_pred CeeeeccccccCCCh-----HHHHHHHhhhhhcCCCeEEEEcccccc
Q psy11688 219 PYLFNGDFVDRGSFS-----VECIFTLFGFKLLYPNHFFMARGNHES 260 (546)
Q Consensus 219 ~~~~lGD~vdrG~~~-----~e~l~~l~~l~~~~p~~v~~lrGNHE~ 260 (546)
.++..||+++..+.+ ..++..+..+.. + + +. ||||.
T Consensus 126 Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg~---d-~-~~-GNHEf 166 (562)
T 2wdc_A 126 LVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGV---D-H-MV-SHWEW 166 (562)
T ss_dssp EEEECSCCSSSSHHHHHHTTHHHHHHHHHHTC---C-E-EC-CSGGG
T ss_pred EEEeCCCCCCcchhhhhhCCHHHHHHHHhhCC---c-E-Ee-cchhc
Confidence 678899999976532 345555655542 2 3 46 99995
No 391
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=22.95 E-value=1.2e+02 Score=23.21 Aligned_cols=33 Identities=12% Similarity=0.004 Sum_probs=21.4
Q ss_pred hhhHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy11688 29 VEDKERAEKLKAEANEHFKNQAYNKAIELYSAA 61 (546)
Q Consensus 29 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~~~~a 61 (546)
.+--+.++.++.-|..++++|++..|+.++.-+
T Consensus 29 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 29 EGFMRNIEAYISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 344556667777777777777777777665444
No 392
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=22.73 E-value=1.4e+02 Score=30.61 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHhhcc
Q psy11688 102 TKAYYRRAAAYMSLGKFKLALRDYEAVHKA 131 (546)
Q Consensus 102 ~~a~~~lg~~~~~~g~~~eA~~~~~kal~l 131 (546)
.-|+..+|.+|+.+++|++|.+..++++..
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 446777788888888888888888877754
No 393
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=22.36 E-value=1.2e+02 Score=23.18 Aligned_cols=26 Identities=12% Similarity=0.063 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHH
Q psy11688 33 ERAEKLKAEANEHFKNQAYNKAIELY 58 (546)
Q Consensus 33 ~~a~~~~~~g~~~~~~g~~~~Ai~~~ 58 (546)
+.++.++.-|..++++||+..|+.++
T Consensus 37 ~mA~~Y~~Da~~fl~kGD~v~Ala~i 62 (87)
T 2pmr_A 37 ERALNYRDDSVYYLEKGDHITSFGCI 62 (87)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34444444455555555555544444
No 394
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=21.84 E-value=1.4e+02 Score=30.29 Aligned_cols=46 Identities=20% Similarity=0.080 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhCC--------C-HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy11688 52 NKAIELYSAAIEVNP--------T-AIYYANRSFAYLKTEAIGYALNDASKAIEL 97 (546)
Q Consensus 52 ~~Ai~~~~~al~~~p--------~-~~a~~nla~~~~~~g~~~~Al~~~~~al~l 97 (546)
+..+..++.|+..-| + ..++..+|.+|+-.++|++|++.+++++..
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 444555666665433 1 567777888888888888888888777753
No 395
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=20.88 E-value=1.6e+02 Score=30.31 Aligned_cols=48 Identities=15% Similarity=0.070 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhCCC-----------cHHHHHHHHHHHHHhcChHHHHHHHHHhhcc
Q psy11688 84 IGYALNDASKAIELDQT-----------YTKAYYRRAAAYMSLGKFKLALRDYEAVHKA 131 (546)
Q Consensus 84 ~~~Al~~~~~al~l~p~-----------~~~a~~~lg~~~~~~g~~~eA~~~~~kal~l 131 (546)
|+..+++++.|+..-|. ..-|+-.+|.+|+.+++|++|.+..++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34567788888876553 2347888999999999999999999999864
No 396
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=20.83 E-value=1.8e+02 Score=29.88 Aligned_cols=30 Identities=17% Similarity=-0.012 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy11688 68 AIYYANRSFAYLKTEAIGYALNDASKAIEL 97 (546)
Q Consensus 68 ~~a~~nla~~~~~~g~~~~Al~~~~~al~l 97 (546)
..|+..+|.+|+-+++|++|++.+++++..
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 678999999999999999999999999975
No 397
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=26.12 E-value=21 Score=38.73 Aligned_cols=49 Identities=16% Similarity=0.062 Sum_probs=27.5
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcChHH
Q psy11688 72 ANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKL 120 (546)
Q Consensus 72 ~nla~~~~~~g~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~e 120 (546)
..+|...+..|+|+-|.+..+.++..+|+|.+|...++.+|.++|.-.+
T Consensus 465 ~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~ 513 (668)
T 2yhe_A 465 LKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTE 513 (668)
Confidence 3344555555566666666666666666666655555655555554433
No 398
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=20.49 E-value=75 Score=33.15 Aligned_cols=40 Identities=15% Similarity=0.051 Sum_probs=23.9
Q ss_pred CCCcceeeccccCCCCCch----------HHHHHHHHHhcccCCCcEEEEcCCCc
Q psy11688 484 NLDFTQLFNGDFVDRGSFS----------VECIFTLFGFKLLYPNHFFMARVECI 528 (546)
Q Consensus 484 ~~~~~~~f~gd~vdrg~~~----------~e~~~~l~~~~~~~~~~~~~~rgnh~ 528 (546)
.|+.-+|..||.++.++.+ ..++..|-.+. ++ .+..|||.
T Consensus 62 ~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ln~lg---~D--~~t~GNHe 111 (527)
T 3qfk_A 62 YDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRMA---FD--FGTLGNHE 111 (527)
T ss_dssp SSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHHHHTC---CC--EECCCGGG
T ss_pred CCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHHHhcC---Cc--EEeccccc
Confidence 3444556789999987654 23444444433 32 34579993
No 399
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=20.06 E-value=1.7e+02 Score=29.72 Aligned_cols=27 Identities=30% Similarity=0.138 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy11688 69 IYYANRSFAYLKTEAIGYALNDASKAI 95 (546)
Q Consensus 69 ~a~~nla~~~~~~g~~~~Al~~~~~al 95 (546)
.|+..+|.+|+-.++|++|++.+++++
T Consensus 197 aa~allArvyL~~~~~~~A~~~a~~vi 223 (461)
T 3kez_A 197 AAMTLLSRVYLYKGEYNEALTMAENAI 223 (461)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 334444444444444444444444333
Done!