RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11688
(546 letters)
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5
{Human (Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 357 bits (917), Expect = e-121
Identities = 196/311 (63%), Positives = 238/311 (76%), Gaps = 4/311 (1%)
Query: 133 PNDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFT 192
P +D K + ++++ + + KLHRK AY+IL+ +K + +LV T+++ K T
Sbjct: 4 PKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKIT 63
Query: 193 VCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFF 252
VCGD HGQFYDL+NIFELNGLPS NPY+FNGDFVDRGSFSVE I TLFGFKLLYP+HF
Sbjct: 64 VCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFH 123
Query: 253 MARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCINNKVLVMHGGLFSS 312
+ RGNHE+ MNQIYGFEGEVK+KYT M + F+EV+ WLPL CIN KVL+MHGGLFS
Sbjct: 124 LLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSE 183
Query: 313 DNVTLEDIRTIDRNRQPPDEGLMCELLWSDPQIPNGRAPSKRGVGVHFGPDVTKAFLERN 372
D VTL+DIR I+RNRQPPD G MC+LLWSDPQ NGR+ SKRGV FGPDVTKAFLE N
Sbjct: 184 DGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEEN 243
Query: 373 KLEYIIRSHEVKQDGYEVAHDGRCITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEA 432
L+YIIRSHEVK +GYEVAH GRC+TVFSAPNYCD +GNK ++I ++G D+ P F + A
Sbjct: 244 NLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTA 303
Query: 433 VGVSPPEPALE 443
V P P ++
Sbjct: 304 V----PHPNVK 310
Score = 67.7 bits (165), Expect = 5e-13
Identities = 54/123 (43%), Positives = 64/123 (52%), Gaps = 38/123 (30%)
Query: 440 PALENDKVTLKFMTDLMQTYKAQGKLHRKYAYRILMDIKK-------------------- 479
P LE+ KVT+ FM +LMQ YK Q KLHRK AY+IL+ +K+
Sbjct: 4 PKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKIT 63
Query: 480 ------------KKILNL------DFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFF 521
I L +FNGDFVDRGSFSVE I TLFGFKLLYP+HF
Sbjct: 64 VCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFH 123
Query: 522 MAR 524
+ R
Sbjct: 124 LLR 126
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A
subunit) {Human (Homo sapiens) [TaxId: 9606]}
Length = 473
Score = 308 bits (791), Expect = e-100
Identities = 105/293 (35%), Positives = 160/293 (54%), Gaps = 22/293 (7%)
Query: 155 KGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLP 214
+G+L A RI+ + ++ + +L+ I +A TVCGDIHGQF+DLM +FE+ G P
Sbjct: 40 EGRLEESVALRIITEGASILRQEKNLLDI----DAPVTVCGDIHGQFFDLMKLFEVGGSP 95
Query: 215 SPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYGFEGEVK 274
+ YLF GD+VDRG FS+EC+ L+ K+LYP F+ RGNHE ++ + + F+ E K
Sbjct: 96 -ANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 154
Query: 275 SKYTDLMAQFFTEVYNWLPLCHCINNKVLVMHGGLFSSDNVTLEDIRTIDRNRQPPDEGL 334
KY++ + + ++ LPL +N + L +HGG S + TL+DIR +DR ++PP G
Sbjct: 155 IKYSERVYDACMDAFDCLPLAALMNQQFLCVHGG-LSPEINTLDDIRKLDRFKEPPAYGP 213
Query: 335 MCELLWSDPQ--------IPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVKQD 386
MC++LWSDP + + RG + FL+ N L I+R+HE +
Sbjct: 214 MCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDA 273
Query: 387 GYEVAHDGR------CITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEAV 433
GY + + IT+FSAPNY D NK A + + M + +
Sbjct: 274 GYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--NIRQFNCS 324
Score = 62.7 bits (152), Expect = 4e-11
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 36/115 (31%)
Query: 443 ENDKVTLKFMTDLMQTYKAQGKLHRKYAYRILMDIKK----------------------- 479
+ K + L +G+L A RI+ +
Sbjct: 24 NDGKPRVDI---LKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHG 80
Query: 480 -----KKILNL-----DFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMAR 524
K+ + + LF GD+VDRG FS+EC+ L+ K+LYP F+ R
Sbjct: 81 QFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLR 135
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic
subunit alpha isoform, PP2A-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 288
Score = 294 bits (753), Expect = 7e-97
Identities = 102/289 (35%), Positives = 161/289 (55%), Gaps = 8/289 (2%)
Query: 146 NKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLM 205
++ ++++ +L + K + + ++ + TVCGD+HGQF+DLM
Sbjct: 6 DQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEV----RCPVTVCGDVHGQFHDLM 61
Query: 206 NIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQ 265
+F + G PD YLF GD+VDRG +SVE + L K+ Y + RGNHES + Q
Sbjct: 62 ELFRIGGKS-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQ 120
Query: 266 IYGFEGEVKSKY-TDLMAQFFTEVYNWLPLCHCINNKVLVMHGGLFSSDNVTLEDIRTID 324
+YGF E KY + ++FT+++++LPL ++ ++ +HGGL S + TL+ IR +D
Sbjct: 121 VYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSID-TLDHIRALD 179
Query: 325 RNRQPPDEGLMCELLWSDPQIPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVK 384
R ++ P EG MC+LLWSDP G S RG G FG D+++ F N L + R+H++
Sbjct: 180 RLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLV 239
Query: 385 QDGYEVAHDGRCITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEAV 433
+GY HD +T+FSAPNYC GN+ A + + + F ++
Sbjct: 240 MEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMEL-DDTLKYSFLQFDPA 287
Score = 51.2 bits (122), Expect = 1e-07
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 471 YRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMAR 524
+ LM++ + + D LF GD+VDRG +SVE + L K+ Y + R
Sbjct: 57 FHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILR 110
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo
sapiens), beta isoform [TaxId: 9606]}
Length = 294
Score = 284 bits (728), Expect = 3e-93
Identities = 110/277 (39%), Positives = 165/277 (59%), Gaps = 8/277 (2%)
Query: 157 KLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSP 216
+L + + + +F++Q L+ + EA +CGDIHGQ+YDL+ +FE G P P
Sbjct: 24 QLQENEIRGLCLKSREIFLSQPILLEL----EAPLKICGDIHGQYYDLLRLFEYGGFP-P 78
Query: 217 DNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARGNHESAYMNQIYGFEGEVKSK 276
++ YLF GD+VDRG S+E I L +K+ YP +FF+ RGNHE A +N+IYGF E K +
Sbjct: 79 ESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 138
Query: 277 YTDLMAQFFTEVYNWLPLCHCINNKVLVMHGGLFSSDNVTLEDIRTIDRNRQPPDEGLMC 336
Y + + FT+ +N LP+ ++ K+ HGG S D ++E IR I R PD+GL+C
Sbjct: 139 YNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGG-LSPDLQSMEQIRRIMRPTDVPDQGLLC 197
Query: 337 ELLWSDPQ-IPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHEVKQDGYEVAHDGR 395
+LLWSDP G + RGV FG +V FL ++ L+ I R+H+V +DGYE +
Sbjct: 198 DLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQ 257
Query: 396 CITVFSAPNYCDSVGNKGAFITMKGKDMVPHFTTYEA 432
+T+FSAPNYC N GA +++ + ++ F +
Sbjct: 258 LVTLFSAPNYCGEFDNAGAMMSV-DETLMCSFQILKP 293
Score = 47.0 bits (111), Expect = 3e-06
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 471 YRILMDIKKKKILNLDFTQLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMAR 524
Y L+ + + + LF GD+VDRG S+E I L +K+ YP +FF+ R
Sbjct: 64 YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 117
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 76.2 bits (186), Expect = 1e-16
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 12/149 (8%)
Query: 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASK 93
A++LK + N F + Y +A Y AI NP A+YY NR+ YLK + AL D +
Sbjct: 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRR 63
Query: 94 AIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA----------KAKFT 143
A+ELD KA++ + + + A+ + + + + AK
Sbjct: 64 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKK 123
Query: 144 ECNKI-VKRMQIKGKLHRKYAYRILMDIK 171
N I +R+ + +LH I + +
Sbjct: 124 RWNSIEERRIHQESELHSYLTRLIAAERE 152
Score = 38.0 bits (87), Expect = 0.001
Identities = 12/107 (11%), Positives = 37/107 (34%), Gaps = 6/107 (5%)
Query: 42 ANEHFKNQAYNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEAIGYALNDASKAIELDQT 100
+ ++Y++AI A + + + + + L+ A +IE +
Sbjct: 79 GQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRI-----AKKKRWNSIEERRI 133
Query: 101 YTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNK 147
+ ++ + + + L + + H+ +D +A+
Sbjct: 134 HQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEA 180
Score = 29.2 bits (64), Expect = 0.87
Identities = 12/87 (13%), Positives = 22/87 (25%)
Query: 104 AYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYA 163
+ K+ A Y P C +++ + R+
Sbjct: 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRAL 65
Query: 164 YRILMDIKALFMTQDSLVHITVEDEAK 190
+KA F + + DEA
Sbjct: 66 ELDGQSVKAHFFLGQCQLEMESYDEAI 92
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 159
Score = 74.3 bits (181), Expect = 3e-16
Identities = 79/143 (55%), Positives = 103/143 (72%), Gaps = 1/143 (0%)
Query: 28 SVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEAIGY 86
+ +RAE+LK +AN++FK + Y AI+ YS AIE+NP AIYY NRS AYL+TE GY
Sbjct: 3 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGY 62
Query: 87 ALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECN 146
AL DA++AIELD+ Y K YYRRAA+ M+LGKF+ ALRDYE V K +P+DKDAK K+ ECN
Sbjct: 63 ALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 122
Query: 147 KIVKRMQIKGKLHRKYAYRILMD 169
KIVK+ + + R ++D
Sbjct: 123 KIVKQKAFERAIAGDEHKRSVVD 145
>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase
{Bacteriophage lambda [TaxId: 10710]}
Length = 219
Score = 74.9 bits (183), Expect = 6e-16
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 193 VCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFF 252
V GD+HG + +LMN + G + + + GD VDRG+ +VEC+ +L+ F
Sbjct: 17 VVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECL------ELITFPWFR 70
Query: 253 MARGNHESAYMNQIYGFEGEVK------------SKYTDLMAQFFTEVYNWLPLCH---C 297
RGNHE ++ + +++A+ + LPL
Sbjct: 71 AVRGNHEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVS 130
Query: 298 INNKVLVMHGGLFSSD 313
+ K ++ H +
Sbjct: 131 KDKKYVICHADYPFDE 146
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 62.7 bits (151), Expect = 3e-12
Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 21/155 (13%)
Query: 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT----------------AIYYAN 73
E E+A +K + +FK Y +A+ Y + + N
Sbjct: 10 EKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLN 69
Query: 74 RSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARP 133
+ YLK A+ KA+ LD K YRR A + + +F+ A D+E V + P
Sbjct: 70 LAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNP 129
Query: 134 NDKDAKAKFTECNKIVKRM-----QIKGKLHRKYA 163
+K A+ + C K K + + +K+A
Sbjct: 130 QNKAARLQIFMCQKKAKEHNERDRRTYANMFKKFA 164
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 57.6 bits (138), Expect = 8e-11
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDA 91
++A K K N+ +K + ++ A++ Y A E++PT Y N++ Y +
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELC 61
Query: 92 SKAIELDQT-------YTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTE 144
KAIE+ + KAY R +Y K+K A+ Y D K +
Sbjct: 62 EKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT-PDVLKKCQQ 120
Query: 145 CNKIVK 150
KI+K
Sbjct: 121 AEKILK 126
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl
isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 58.1 bits (139), Expect = 9e-11
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 26 EVSVEDK-ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT----------------- 67
+ + E+K + A +K E NE FK N+AI Y A++
Sbjct: 7 DYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIE 66
Query: 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEA 127
N + Y K + A++ ASK +++D+ KA Y+ A M G + A +
Sbjct: 67 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYK 126
Query: 128 VHKARPNDKDAKAKFTECNKIVKRMQ 153
PN+ D + + C +K +
Sbjct: 127 AASLNPNNLDIRNSYELCVNKLKEAR 152
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 55.4 bits (132), Expect = 3e-10
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSF-AYLKTEAIGYALNDA 91
E+ +LK + N+ + A++ YS AI+++P + AY K A D
Sbjct: 1 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDG 60
Query: 92 SKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTEC 145
K ++L + K Y R+AAA L +F+ A R YE K N+ K
Sbjct: 61 CKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNM 114
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 251
Score = 57.0 bits (136), Expect = 9e-10
Identities = 22/169 (13%), Positives = 41/169 (24%), Gaps = 23/169 (13%)
Query: 193 VCGDIHGQFYDLMNIFELNGLPSPDNP----YLFNGDFVDRGSFSVECIFTLFGFKLLYP 248
V +I G L + Y G+ V + E I + L
Sbjct: 5 VLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVI--KDLTKK 62
Query: 249 NHFFMARGNHESA-----------YMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHC 297
+ + RG ++ G VK + E +L
Sbjct: 63 ENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPI 122
Query: 298 I------NNKVLVMHGGLFSSDNVTLEDIRTIDRNRQPPDEGLMCELLW 340
N+V ++G + + + + E+L
Sbjct: 123 YLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLI 171
Score = 31.6 bits (70), Expect = 0.19
Identities = 8/74 (10%), Positives = 20/74 (27%), Gaps = 1/74 (1%)
Query: 472 RILMDIKKKKILNLDFTQL-FNGDFVDRGSFSVECIFTLFGFKLLYPNHFFMARVECIFT 530
L I++ + + + G+ V + E I + + + I
Sbjct: 18 AALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQIIA 77
Query: 531 LFGFKLLYPNHFFM 544
+ P +
Sbjct: 78 MSDPHATDPGYIDK 91
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 53.9 bits (128), Expect = 3e-09
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT----------------AIYYAN 73
E E++ +K +FK Y +A+ Y + + N
Sbjct: 8 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLN 67
Query: 74 RSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARP 133
+ +LK +A A+ +KA+ELD K RR A++++ F+LA D++ V + P
Sbjct: 68 LAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYP 127
Query: 134 NDKDAKAKFTECNKIVKRMQIKGK 157
N+K AK + C + ++R + K
Sbjct: 128 NNKAAKTQLAVCQQRIRRQLAREK 151
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus)
[TaxId: 9913]}
Length = 169
Score = 53.2 bits (126), Expect = 7e-09
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Query: 18 NASNPAPKEVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAA---------------- 61
++ K+V + +E LK N FK+Q + AI+ Y+
Sbjct: 11 EDADVDLKDVD-KILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADG 69
Query: 62 IEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKL 120
++ P N LK A++ +A+E+D + TKA YRRA + L ++
Sbjct: 70 AKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQ 129
Query: 121 ALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGK 157
AL D + + P DK +A+ + + +K + K K
Sbjct: 130 ALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEK 166
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 54.7 bits (130), Expect = 1e-08
Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Query: 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYAN-RSFAYLKTEAIGYALN 89
+ AN + + +A + Y+ A+ + PT N + + I A+
Sbjct: 267 QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 326
Query: 90 DASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA 138
KA+E+ + A+ A+ GK + AL Y+ + P DA
Sbjct: 327 LYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADA 375
Score = 52.8 bits (125), Expect = 5e-08
Identities = 9/77 (11%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Query: 38 LKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIE 96
A+ ++ + A P S + + + + + ++ AI+
Sbjct: 2 PMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIK 61
Query: 97 LDQTYTKAYYRRAAAYM 113
+ +AY Y
Sbjct: 62 QNPLLAEAYSNLGNVYK 78
Score = 51.6 bits (122), Expect = 1e-07
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 42 ANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQT 100
AN + +A+ LY A+EV P A ++N + + + AL +AI + T
Sbjct: 312 ANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 371
Query: 101 YTKAYYRRAAAYMSLG 116
+ AY +
Sbjct: 372 FADAYSNMGNTLKEMQ 387
Score = 47.4 bits (111), Expect = 3e-06
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 1/124 (0%)
Query: 31 DKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALN 89
D + N + + +++A+ Y A+ ++P A+ + N + Y + I A++
Sbjct: 199 DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAID 258
Query: 90 DASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIV 149
+AIEL + AY A A G A Y + P D+ +
Sbjct: 259 TYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQ 318
Query: 150 KRMQ 153
++
Sbjct: 319 GNIE 322
Score = 42.0 bits (97), Expect = 1e-04
Identities = 5/52 (9%), Positives = 13/52 (25%)
Query: 87 ALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA 138
A + + T ++ + + + K P +A
Sbjct: 18 AERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEA 69
Score = 36.6 bits (83), Expect = 0.007
Identities = 15/71 (21%), Positives = 24/71 (33%)
Query: 68 AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEA 127
A+ ++N + I A++ KA+ LD + AY F A+ Y
Sbjct: 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR 228
Query: 128 VHKARPNDKDA 138
PN
Sbjct: 229 ALSLSPNHAVV 239
Score = 29.6 bits (65), Expect = 1.1
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYL 79
++ + L ++ HF+ + +++ + AI+ NP A Y+N Y
Sbjct: 28 QEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYK 78
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 48.7 bits (115), Expect = 3e-07
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKA 94
A L E + + A++ +SA + P + N Y + + A +++
Sbjct: 5 AISLWNEGVLAADKKDWKGALDAFSAVQD--PHSRICFNIGCMYTILKNMTEAEKAFTRS 62
Query: 95 IELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPND 135
I D+ AY++R Y K+ LA++D + +
Sbjct: 63 INRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGN 103
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 42.6 bits (99), Expect = 3e-05
Identities = 19/112 (16%), Positives = 29/112 (25%), Gaps = 5/112 (4%)
Query: 190 KFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTL--FGFKLLY 247
K DIHG + EL + GD ++ G + + L
Sbjct: 3 KLMFASDIHGSLPATERVLELFAQSGAQW-LVILGDVLNHGPRNALPEGYAPAKVVERLN 61
Query: 248 PNH--FFMARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHC 297
RGN +S + F + L Q + L
Sbjct: 62 EVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPEN 113
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 43.1 bits (101), Expect = 4e-05
Identities = 13/96 (13%), Positives = 27/96 (28%), Gaps = 1/96 (1%)
Query: 41 EANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQ 99
+ +A+EL AI+ +P A ++ A ++I+L
Sbjct: 2 QWKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFP 61
Query: 100 TYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPND 135
Y + + K + N+
Sbjct: 62 EYLPGASQLRHLVKAAQARKDFAQGAATAKVLGENE 97
Score = 40.4 bits (94), Expect = 3e-04
Identities = 9/52 (17%), Positives = 12/52 (23%)
Query: 87 ALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA 138
AL +AI+ G F+ A K P
Sbjct: 15 ALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 66
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus
thermophilus [TaxId: 274]}
Length = 228
Score = 42.0 bits (97), Expect = 8e-05
Identities = 15/191 (7%), Positives = 40/191 (20%), Gaps = 14/191 (7%)
Query: 193 VCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFF 252
+ G L +L D G+ + + + S + +
Sbjct: 10 ATSNPMGDLEALEKFVKLAPDTGADA-IALIGNLMPKAAKSRDYAAFFRILSEAH-LPTA 67
Query: 253 MARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCINNKVLVMHGGLFSS 312
G ++ + + + ++ G
Sbjct: 68 YVPGPQDAP----------IWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEI 117
Query: 313 DNVTLEDIRTIDRNRQPPDEGLMCEL--LWSDPQIPNGRAPSKRGVGVHFGPDVTKAFLE 370
+ + R E + L L P+I G ++
Sbjct: 118 ADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQGSHEVAHLIK 177
Query: 371 RNKLEYIIRSH 381
+ ++ +
Sbjct: 178 THNPLLVLVAG 188
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 42.5 bits (99), Expect = 1e-04
Identities = 7/91 (7%), Positives = 19/91 (20%), Gaps = 3/91 (3%)
Query: 49 QAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYR 107
Y + ++ V+ + + K + S +
Sbjct: 100 GFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYI--CQHCLVH 157
Query: 108 RAAAYMSLGKFKLALRDYEAVHKARPNDKDA 138
+ A Y + P++
Sbjct: 158 LGDIARYRNQTSQAESYYRHAAQLVPSNGQP 188
Score = 34.0 bits (77), Expect = 0.049
Identities = 7/47 (14%), Positives = 13/47 (27%), Gaps = 3/47 (6%)
Query: 93 KAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAK 139
+A L T + A + S + Y+ + K
Sbjct: 11 QAEVLKADMTDSKLGPAEVWTSRQALQDL---YQKMLVTDLEYALDK 54
Score = 32.5 bits (73), Expect = 0.16
Identities = 12/106 (11%), Positives = 26/106 (24%), Gaps = 17/106 (16%)
Query: 52 NKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDA-SKAIELDQTYT------- 102
++ + A + + + + AL D K + D Y
Sbjct: 3 LQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQ----ALQDLYQKMLVTDLEYALDKKVEQ 58
Query: 103 ----KAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTE 144
A+ + K + E + A +T+
Sbjct: 59 DLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQ 104
Score = 29.8 bits (66), Expect = 0.95
Identities = 8/74 (10%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Query: 51 YNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRA 109
++A Y A ++ P Y + + ++I + + A
Sbjct: 168 TSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQ 227
Query: 110 AAYMSLGKFKLALR 123
A + + ++
Sbjct: 228 KALSKALESRDEVK 241
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 41.7 bits (96), Expect = 2e-04
Identities = 20/135 (14%), Positives = 42/135 (31%), Gaps = 1/135 (0%)
Query: 41 EANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQ 99
E + A+ L+ AA++ +P + + E A++ + +EL
Sbjct: 25 EGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKP 84
Query: 100 TYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLH 159
A A ++ + + A + P E K L
Sbjct: 85 DNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILG 144
Query: 160 RKYAYRILMDIKALF 174
+ + +++K LF
Sbjct: 145 SLLSDSLFLEVKELF 159
Score = 36.7 bits (83), Expect = 0.005
Identities = 9/81 (11%), Positives = 24/81 (29%), Gaps = 2/81 (2%)
Query: 50 AYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRA 109
Y+K + + + L+ + A+ A++ D + +A+
Sbjct: 3 TYDKGYQFEEENPLRDHPQPF--EEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLG 60
Query: 110 AAYMSLGKFKLALRDYEAVHK 130
+ LA+ +
Sbjct: 61 TTQAENEQELLAISALRRCLE 81
Score = 35.9 bits (81), Expect = 0.009
Identities = 8/52 (15%), Positives = 22/52 (42%)
Query: 88 LNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAK 139
+ +A+EL Y ++ Y + ++LG + A+ + + + +
Sbjct: 226 VAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPR 277
Score = 31.3 bits (69), Expect = 0.31
Identities = 14/102 (13%), Positives = 29/102 (28%), Gaps = 2/102 (1%)
Query: 43 NEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTY 101
+A+ Y A+E+ P N + + A A+ +A+ + +
Sbjct: 214 ATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 273
Query: 102 TKAYYRRAAAYMSLGK-FKLALRDYEAVHKARPNDKDAKAKF 142
A ++ +LAL D +
Sbjct: 274 RGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADARDLSTL 315
Score = 30.2 bits (66), Expect = 0.72
Identities = 7/50 (14%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Query: 93 KAIELDQ----TYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA 138
K + ++ + + G A+ +EA + P +A
Sbjct: 6 KGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEA 55
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 122
Score = 39.3 bits (91), Expect = 2e-04
Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 12/121 (9%)
Query: 40 AEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIEL-- 97
A NE + K + + + + F Y +D K I L
Sbjct: 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV---SKSTQFEYAWCLVRTRYNDDIRKGIVLLE 60
Query: 98 -------DQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVK 150
+ + A L +++ AL+ + + P + AK +K +K
Sbjct: 61 ELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK 120
Query: 151 R 151
+
Sbjct: 121 K 121
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium
tepidum [TaxId: 1097]}
Length = 156
Score = 39.7 bits (91), Expect = 2e-04
Identities = 16/150 (10%), Positives = 35/150 (23%), Gaps = 22/150 (14%)
Query: 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALN 89
++ A ++A Y++A A+E++ T
Sbjct: 4 KEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDH------------- 50
Query: 90 DASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIV 149
+ A A L F AL + + +
Sbjct: 51 --------AGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISA 102
Query: 150 K-RMQIKGKLHRKYAYRILMDIKALFMTQD 178
+ + A + K + M ++
Sbjct: 103 VYSRALALDGLGRGAEAMPEFKKVVEMIEE 132
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 38.3 bits (87), Expect = 0.001
Identities = 20/137 (14%), Positives = 36/137 (26%), Gaps = 7/137 (5%)
Query: 82 EAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA--- 138
+ + D + Y R Y SLG LA D+ RP+ +
Sbjct: 17 VILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNY 76
Query: 139 ----KAKFTECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVC 194
+ + + +L Y Y L AL+ +
Sbjct: 77 LGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDP 136
Query: 195 GDIHGQFYDLMNIFELN 211
D + + +L+
Sbjct: 137 NDPFRSLWLYLAEQKLD 153
Score = 35.6 bits (80), Expect = 0.010
Identities = 10/96 (10%), Positives = 28/96 (29%)
Query: 43 NEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYT 102
+ + QA + + + + + + DA+ L + +
Sbjct: 150 QKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLS 209
Query: 103 KAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA 138
+ + Y+SLG A ++ ++
Sbjct: 210 ETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVE 245
Score = 32.5 bits (72), Expect = 0.099
Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 1/143 (0%)
Query: 23 APKEVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKT 81
++ D ERA+ L + A +S A+ + P + +
Sbjct: 25 ILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQA 84
Query: 82 EAIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAK 141
A +ELD TY A+ R A G+ KLA D A ++ PND
Sbjct: 85 GNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLW 144
Query: 142 FTECNKIVKRMQIKGKLHRKYAY 164
+ + Q K L + +
Sbjct: 145 LYLAEQKLDEKQAKEVLKQHFEK 167
Score = 26.7 bits (57), Expect = 6.8
Identities = 6/76 (7%), Positives = 16/76 (21%), Gaps = 1/76 (1%)
Query: 43 NEHFKNQAYNKAIELYSAAIEVNP-TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTY 101
+ + + + + YL + A A+ +
Sbjct: 183 GNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHN 242
Query: 102 TKAYYRRAAAYMSLGK 117
+ LG+
Sbjct: 243 FVEHRYALLELSLLGQ 258
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 35.7 bits (81), Expect = 0.009
Identities = 11/104 (10%), Positives = 28/104 (26%), Gaps = 15/104 (14%)
Query: 42 ANEHFKNQAYNKAIELYSAAIEVNPT--------AIYYANRSFAYLKTEAIGYALNDASK 93
A+ + Y +A ++YS I+ + Y+ + L A +
Sbjct: 165 ADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQE 224
Query: 94 AIELDQTYT-----KAYYRRAAAY--MSLGKFKLALRDYEAVHK 130
D + A + ++++ +
Sbjct: 225 GQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMR 268
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 35.7 bits (81), Expect = 0.011
Identities = 14/84 (16%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Query: 56 ELYSAAIEVNPT-AIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYMS 114
I + Y + E A AIEL+ ++ R S
Sbjct: 30 PNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKS 89
Query: 115 LGK-FKLALRDYEAVHKARPNDKD 137
L K + A+ + +P +
Sbjct: 90 LQKDLHEEMNYITAIIEEQPKNYQ 113
Score = 35.3 bits (80), Expect = 0.017
Identities = 19/179 (10%), Positives = 52/179 (29%), Gaps = 11/179 (6%)
Query: 47 KNQAYNKAIELYSAAIEVNPT-AIYYANRSFAYLKTE-AIGYALNDASKAIELDQTYTKA 104
+++ +A +L AIE+N + R + + +N + IE +
Sbjct: 55 RDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQV 114
Query: 105 YYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIKGKLHRKYAY 164
++ R L L + + ++ + K +
Sbjct: 115 WHHRRVLVEWLRDPSQELEFIADILNQDAKN-----YHAWQHRQWVIQEFKLWDNELQYV 169
Query: 165 RILMDIKALFMTQDSLVHITVEDEAKFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFN 223
L+ + + + + + + + + + + +L P N +N
Sbjct: 170 DQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLV----PHNESAWN 224
Score = 30.3 bits (67), Expect = 0.49
Identities = 4/46 (8%), Positives = 10/46 (21%)
Query: 93 KAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDA 138
I + Y A + + A + + +
Sbjct: 34 VQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTV 79
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 334
Score = 35.0 bits (79), Expect = 0.018
Identities = 13/110 (11%), Positives = 27/110 (24%), Gaps = 4/110 (3%)
Query: 8 LEYLSMSSTTNASNPAPKEVSVEDKERAEKLKAEANEHFKNQAYNK---AIELYSAAIEV 64
LE + + T+ ++ + RAE L K+ + +
Sbjct: 212 LELVQNAFFTDPNDQSAWFYHRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPE 271
Query: 65 NP-TAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYTKAYYRRAAAYM 113
N + A L S +D + ++
Sbjct: 272 NKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFL 321
Score = 33.8 bits (76), Expect = 0.047
Identities = 24/204 (11%), Positives = 56/204 (27%), Gaps = 23/204 (11%)
Query: 32 KERAEKLKA--EANEHF-----KNQAYNKAIELYSAAIEVNP---TAIYYANRSFAYLKT 81
ER +KLK A + + +EL S + NP T +L+T
Sbjct: 19 LEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLET 78
Query: 82 EAIGY--------ALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARP 133
E L + ++ ++ R L + A R+ E +
Sbjct: 79 EKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWA-RELELCARFLE 137
Query: 134 NDKDAKAKFTECNKIVKRMQIKGKLHRKYAYRIL----MDIKALFMTQDSLVHITVEDEA 189
D+ + + + + + ++ + + L + + ++
Sbjct: 138 ADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDS 197
Query: 190 KFTVCGDIHGQFYDLMNIFELNGL 213
+ +L +
Sbjct: 198 GPQGRLPENVLLKELELVQNAFFT 221
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 33.4 bits (74), Expect = 0.069
Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 1/101 (0%)
Query: 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTEAIGYALN 89
ED AE A + ++A L A+E P +Y+ R A + +
Sbjct: 7 EDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYS-RIVATSVLGEVLHCKG 65
Query: 90 DASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHK 130
+ ++++ L Q + + + +L A
Sbjct: 66 ELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGF 106
Score = 31.0 bits (68), Expect = 0.37
Identities = 9/45 (20%), Positives = 15/45 (33%)
Query: 93 KAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKD 137
K I D + + RA ++ G A R + + P
Sbjct: 3 KDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWF 47
>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB
{Pseudomonas putida [TaxId: 303]}
Length = 304
Score = 32.1 bits (71), Expect = 0.16
Identities = 46/257 (17%), Positives = 67/257 (26%), Gaps = 18/257 (7%)
Query: 148 IVKRMQIKGKLHRKYAYRILMDIKALFMTQDSLVHITVEDEAKFTVCGDIH---GQFYDL 204
I ++Q + A R I A+ + + H T + + DL
Sbjct: 60 IRAQLQAFAPMQPARALRD-TGINAIVLLDSQIDHTTGLLSLREGCPHQVWCTDMVHQDL 118
Query: 205 MNIFELNGLPSPDNPYLFNGDFVDRGSFSVECI--FTLFGFKLLYPNHFFMARGNHESAY 262
F L + S N L GSF ++ F L +
Sbjct: 119 TTGFPLFNMLSHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPG 178
Query: 263 MNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCINNKVLVMHGGLFSSDNVTLEDIRT 322
N E L + H + ++ RT
Sbjct: 179 DNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWEDDEMQRRGVGTRT 238
Query: 323 IDRNRQPPDEGLMCELLWSDPQIPNGRAPSKRGVGVHFGPDVTKAFLERNKLEYIIRSHE 382
G L D P +R V +H T L+ N E E
Sbjct: 239 GREMGHLAQNGPGGMLEVLD------GFPRQRKVLIHINN--TNPILDENSPERA----E 286
Query: 383 VKQDGYEVAHDGRCITV 399
V + G EVA DG I +
Sbjct: 287 VLRRGVEVAFDGMSIEL 303
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956
{Aquifex aeolicus [TaxId: 63363]}
Length = 257
Score = 29.3 bits (64), Expect = 1.1
Identities = 11/103 (10%), Positives = 31/103 (30%), Gaps = 2/103 (1%)
Query: 190 KFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249
K + +F L + + PD + G+ + + E +
Sbjct: 4 KVLAIKNFKERFDLLPKLKGVIAEKQPDI-LVVVGNILKNEALEKEYER-AHLARREPNR 61
Query: 250 HFFMARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWL 292
++ +++ + GE+ K + + + +L
Sbjct: 62 KVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFL 104
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 124
Score = 27.4 bits (61), Expect = 1.8
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 8/60 (13%)
Query: 89 NDASKAIEL--------DQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKA 140
ND +++ + + Y LG++ +A R + + + N+K A
Sbjct: 52 NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 111
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 505
Score = 28.2 bits (62), Expect = 2.8
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 35 AEKLKAEANEHFKNQAYNKAIELYSAAIEVNPT 67
AE+L +A + Y +E+ + + P
Sbjct: 430 AERLLEQARASYARGEYRWVVEVVNRLVFAEPD 462
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936
{Methanococcus jannaschii [TaxId: 2190]}
Length = 165
Score = 27.1 bits (59), Expect = 3.4
Identities = 15/116 (12%), Positives = 31/116 (26%), Gaps = 11/116 (9%)
Query: 190 KFTVCGDIHGQFYDLMNIFELNGLPSPDNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPN 249
K + D H ++ E+ + + + GDFV
Sbjct: 2 KIGIMSDTHDHLPNIRKAIEIFNDENVET-VIHCGDFVSLFVIKEFE---------NLNA 51
Query: 250 HFFMARGNHESAYMNQIYGFEGEVKSKYTDLMAQFFTEVYNWLPLCHCINNKVLVM 305
+ GN++ + + D + + + H + VL M
Sbjct: 52 NIIATYGNNDGERCKLKEWLKDINEENIIDDFISVEIDDLKFF-ITHGHHQSVLEM 106
>d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 93
Score = 26.0 bits (57), Expect = 4.1
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 30 EDKERAEKLKAEANEHFKNQAYNKAIELYSAAIE 63
D A + A E Y +A+ Y I+
Sbjct: 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGID 43
>d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B,
SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 25.2 bits (55), Expect = 5.7
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 33 ERAEKLKAEANEHFKNQAYNKAIELYSAAIE 63
++A L ++A + K Y +A++LY A++
Sbjct: 9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 39
>d2h3ka1 b.1.28.1 (A:1-144) Iron-regulated surface determinant
protein H, IsdH {Staphylococcus aureus [TaxId: 1280]}
Length = 144
Score = 26.2 bits (57), Expect = 6.0
Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 20/156 (12%)
Query: 23 APKEVSVEDKERAEKLKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLKTE 82
A K+ ++E+KE + + N ++ N + Y +P +YY
Sbjct: 8 AIKDPALENKEHDIGPREQVNFQLLDK--NNETQYYHFFSIKDPADVYYT---------- 55
Query: 83 AIGYALNDASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKF 142
+ELD T + +++ Y + K + L Y V + + +
Sbjct: 56 -------KKKAEVELDIN-TASTWKKFEVYENNQKLPVRLVSYSPVPEDHAYIRFPVSDG 107
Query: 143 TECNKIVKRMQIKGKLHRKYAYRILMDIKALFMTQD 178
T+ KIV QI Y Y L+ K ++
Sbjct: 108 TQELKIVSSTQIDDGEETNYDYTKLVFAKPIYNDPS 143
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 334
Score = 27.1 bits (58), Expect = 6.0
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 57 LYSAAIEVNPTAIYYANRSFAYLKTEAIGYALNDASKAIELDQTYT 102
+ + + A +A + + GY L DA + L Q +T
Sbjct: 289 VVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWT 334
>d1td6a_ a.234.1.1 (A:) Hypothetical protein MPN330 {Mycoplasma
pneumoniae [TaxId: 2104]}
Length = 286
Score = 26.9 bits (59), Expect = 7.2
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 91 ASKAIELDQTYTKAYYRRAAAYMSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVK 150
A I Q Y+ KF L L ++E + DAKA F + ++
Sbjct: 161 ALNQIPGFQGEQVEYFNSKLKQ----KFTLTLGEFEIAQQP-----DAKAYFEQLITQIQ 211
Query: 151 RMQIKGKLHRKYAYRILMDI 170
++ +K ++ ++A I+
Sbjct: 212 QLFLKEPVNAEFANEIIDAF 231
>d1vcva1 c.1.10.1 (A:1-226) Deoxyribose-phosphate aldolase DeoC
{Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Length = 226
Score = 26.2 bits (57), Expect = 8.6
Identities = 27/143 (18%), Positives = 41/143 (28%), Gaps = 12/143 (8%)
Query: 38 LKAEANEHFKNQAYNKAIELYSAAIEVNPTAIYYANRSFAYLK-TEAIGYALNDASKAIE 96
LK KA EL AA VNP +K + A
Sbjct: 10 LKPYLTVDEAVAGARKAEELGVAAYCVNPIYAPVVRPLLRKVKLCVVADFPFGALPTASR 69
Query: 97 LDQTYTKAYYRRAAAY-MSLGKFKLALRDYEAVHKARPNDKDAKAKFTECNKIVKRMQIK 155
+ A +G K R + V + + A ++VK + +
Sbjct: 70 IALVSRLAEVADEIDVVAPIGLVK--SRRWAEVRRDLISVVGAA-----GGRVVKVITEE 122
Query: 156 GKL---HRKYAYRILMDIKALFM 175
L R Y I+ + A F+
Sbjct: 123 PYLRDEERYTLYDIIAEAGAHFI 145
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.138 0.416
Gapped
Lambda K H
0.267 0.0556 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,083,068
Number of extensions: 101458
Number of successful extensions: 430
Number of sequences better than 10.0: 1
Number of HSP's gapped: 381
Number of HSP's successfully gapped: 87
Length of query: 546
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 456
Effective length of database: 1,171,896
Effective search space: 534384576
Effective search space used: 534384576
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.4 bits)