BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1169
(218 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R8Z8|RAB14_PONAB Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3
Length = 215
Score = 347 bits (891), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 167/216 (77%), Positives = 181/216 (83%), Gaps = 5/216 (2%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 65
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 66 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFL 125
LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD +NLTNPNTVI L
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIIL 121
Query: 126 IGNKMDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKL 185
IGNK DLE RDV Y+EAK+FAEEN L+F+EASA TGENVE AFLE AKKIYQNI+DG L
Sbjct: 122 IGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSL 181
Query: 186 NANMTESGVQHK---ERGGPASLGDSSSSDKPNCSC 218
+ N ESGVQHK +GG L + C C
Sbjct: 182 DLNAAESGVQHKPSAPQGG--RLTSEPQPQREGCGC 215
>sp|Q91V41|RAB14_MOUSE Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3
Length = 215
Score = 347 bits (891), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 167/216 (77%), Positives = 181/216 (83%), Gaps = 5/216 (2%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 65
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 66 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFL 125
LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD +NLTNPNTVI L
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIIL 121
Query: 126 IGNKMDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKL 185
IGNK DLE RDV Y+EAK+FAEEN L+F+EASA TGENVE AFLE AKKIYQNI+DG L
Sbjct: 122 IGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSL 181
Query: 186 NANMTESGVQHK---ERGGPASLGDSSSSDKPNCSC 218
+ N ESGVQHK +GG L + C C
Sbjct: 182 DLNAAESGVQHKPSAPQGG--RLTSEPQPQREGCGC 215
>sp|P61106|RAB14_HUMAN Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4
Length = 215
Score = 347 bits (891), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 167/216 (77%), Positives = 181/216 (83%), Gaps = 5/216 (2%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 65
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 66 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFL 125
LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD +NLTNPNTVI L
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIIL 121
Query: 126 IGNKMDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKL 185
IGNK DLE RDV Y+EAK+FAEEN L+F+EASA TGENVE AFLE AKKIYQNI+DG L
Sbjct: 122 IGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSL 181
Query: 186 NANMTESGVQHK---ERGGPASLGDSSSSDKPNCSC 218
+ N ESGVQHK +GG L + C C
Sbjct: 182 DLNAAESGVQHKPSAPQGG--RLTSEPQPQREGCGC 215
>sp|Q5ZKU5|RAB14_CHICK Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3
Length = 215
Score = 347 bits (891), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 167/216 (77%), Positives = 181/216 (83%), Gaps = 5/216 (2%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 65
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 66 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFL 125
LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD +NLTNPNTVI L
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIIL 121
Query: 126 IGNKMDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKL 185
IGNK DLE RDV Y+EAK+FAEEN L+F+EASA TGENVE AFLE AKKIYQNI+DG L
Sbjct: 122 IGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSL 181
Query: 186 NANMTESGVQHK---ERGGPASLGDSSSSDKPNCSC 218
+ N ESGVQHK +GG L + C C
Sbjct: 182 DLNAAESGVQHKPSAPQGG--RLTSEPQPQREGCGC 215
>sp|P61107|RAB14_RAT Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=1 SV=3
Length = 215
Score = 347 bits (889), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 167/212 (78%), Positives = 179/212 (84%), Gaps = 5/212 (2%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 69
Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIKLQIW
Sbjct: 6 YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIW 65
Query: 70 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNK 129
DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD +NLTNPNTVI LIGNK
Sbjct: 66 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNK 125
Query: 130 MDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANM 189
DLE RDV Y+EAK+FAEEN L+F+EASA TGENVE AFLE AKKIYQNI+DG L+ N
Sbjct: 126 ADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNA 185
Query: 190 TESGVQHK---ERGGPASLGDSSSSDKPNCSC 218
ESGVQHK +GG L + C C
Sbjct: 186 AESGVQHKPSAPQGG--RLTSEPQPQREGCGC 215
>sp|Q52NJ6|RAB14_PIG Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3
Length = 215
Score = 347 bits (889), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 167/212 (78%), Positives = 179/212 (84%), Gaps = 5/212 (2%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 69
Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIKLQIW
Sbjct: 6 YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIW 65
Query: 70 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNK 129
DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD +NLTNPNTVI LIGNK
Sbjct: 66 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNK 125
Query: 130 MDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANM 189
DLE RDV Y+EAK+FAEEN L+F+EASA TGENVE AFLE AKKIYQNI+DG L+ N
Sbjct: 126 ADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNA 185
Query: 190 TESGVQHK---ERGGPASLGDSSSSDKPNCSC 218
ESGVQHK +GG L + C C
Sbjct: 186 AESGVQHKPSAPQGG--RLTSEPQPQREGCGC 215
>sp|P36410|RAB14_DICDI Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14
PE=1 SV=2
Length = 206
Score = 305 bits (782), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 172/209 (82%), Gaps = 5/209 (2%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 69
+ Y YIFKYIIIGDMGVGKSCLLHQFTE KF+PD PHTIGVEFGTRI++V+ +KIKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 70 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNK 129
DTAGQERFRAVTRSYYRGAAGAL+VYDITRR TYNHL++WLTD +NLTNPNTVI LIGNK
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNK 122
Query: 130 MDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANM 189
DLEG RDV Y+EA FA++N LIFVE+SA TGENVE+AFL TAK I+Q++++G ++ +
Sbjct: 123 KDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDL-I 181
Query: 190 TESGVQHKERGGPASLGDSSSSDKPNCSC 218
+ G+ + P ++ D D CSC
Sbjct: 182 PDGGIT---KNPPQTITD-KPQDASKCSC 206
>sp|Q68EK7|RAB4B_DANRE Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1
Length = 213
Score = 255 bits (651), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 157/214 (73%), Gaps = 10/214 (4%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTD + L +PN VI L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKK 123
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL+ R+V + EA +FA+EN+L+F+E SA+TGENVE+AFL+ A+ I I+ G+L+
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARSIPNKIESGELDPERM 183
Query: 191 ESGVQHKERGGPASLGD------SSSSDKPNCSC 218
SG+Q+ G ASL S++ K C+C
Sbjct: 184 GSGIQY----GDASLRQIRQPRGSAAQTKQQCNC 213
>sp|Q05975|RAB2_LYMST Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1
Length = 212
Score = 251 bits (642), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 150/194 (77%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++WL D + +N N VI LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE R+V+ +E + FA E+ LIF+E SA T NVE+AF+ TAK+IYQ I+DG + N
Sbjct: 122 DLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINNE 181
Query: 191 ESGVQHKERGGPAS 204
+G++ + PAS
Sbjct: 182 ANGIKIGPQHSPAS 195
>sp|P61018|RAB4B_HUMAN Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1
Length = 213
Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 149/195 (76%), Gaps = 4/195 (2%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTD + L +PN V+ L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL+ R+V + EA +FA+EN+L+F+E SA+TGENVE+AFL+ A+ I I G+L+
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 191 ESGVQHKERGGPASL 205
SG+Q+ G ASL
Sbjct: 184 GSGIQY----GDASL 194
>sp|P61017|RAB4B_CANFA Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1
Length = 213
Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 149/195 (76%), Gaps = 4/195 (2%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTD + L +PN V+ L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL+ R+V + EA +FA+EN+L+F+E SA+TGENVE+AFL+ A+ I I G+L+
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 191 ESGVQHKERGGPASL 205
SG+Q+ G ASL
Sbjct: 184 GSGIQY----GDASL 194
>sp|P20338|RAB4A_HUMAN Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=3
Length = 218
Score = 250 bits (638), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 158/214 (73%), Gaps = 10/214 (4%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTD + L + N VI L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL+ R+V + EA +FA+EN+L+F+E SA+TGENVE+AF++ A+KI I+ G+L+
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 191 ESGVQHKERGGPASLGDSSS---SDKPN---CSC 218
SG+Q+ G A+L S + PN C C
Sbjct: 189 GSGIQY----GDAALRQLRSPRRAQAPNAQECGC 218
>sp|P51146|RAB4B_RAT Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1
Length = 213
Score = 249 bits (637), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 145/186 (77%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTD + L +PN V+ L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL+ R+V + EA +FA+EN+L+F+E SA+TGENVE+AFL+ A+ I I G+L+
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 191 ESGVQH 196
SG+Q+
Sbjct: 184 GSGIQY 189
>sp|Q91ZR1|RAB4B_MOUSE Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2
Length = 213
Score = 249 bits (637), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 145/186 (77%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTD + L +PN V+ L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL+ R+V + EA +FA+EN+L+F+E SA+TGENVE+AFL+ A+ I I G+L+
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 191 ESGVQH 196
SG+Q+
Sbjct: 184 GSGIQY 189
>sp|P05714|RAB4A_RAT Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=3
Length = 218
Score = 249 bits (635), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 112/186 (60%), Positives = 148/186 (79%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTD + L + N VI L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL+ R+V + EA +FA+EN+L+F+E SA+TGENVE+AF++ A+KI I+ G+L+
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 188
Query: 191 ESGVQH 196
SG+Q+
Sbjct: 189 GSGIQY 194
>sp|P56371|RAB4A_MOUSE Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=2
Length = 218
Score = 248 bits (633), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 148/186 (79%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTD + L + N V+ L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKK 128
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL+ R+V + EA +FA+EN+L+F+E SA+TGENVE+AF++ A+KI I+ G+L+
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 188
Query: 191 ESGVQH 196
SG+Q+
Sbjct: 189 GSGIQY 194
>sp|Q2TBH7|RAB4A_BOVIN Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=3
Length = 218
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 112/186 (60%), Positives = 148/186 (79%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTD + L + N VI L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL+ R+V + EA +FA+EN+L+F+E SA+TGENVE+AF++ A+KI I+ G+L+
Sbjct: 129 DLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 191 ESGVQH 196
SG+Q+
Sbjct: 189 GSGIQY 194
>sp|Q38922|RAB1B_ARATH Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2
SV=1
Length = 211
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 150/208 (72%), Gaps = 2/208 (0%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ V G IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL D + NPN I LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKC 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL R V +E ++FA+E+ L+F+EASA T +NVE+AF+ETA KI QNI+DG + +
Sbjct: 122 DLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSNE 181
Query: 191 ESGVQ--HKERGGPASLGDSSSSDKPNC 216
SG++ + G A D + S C
Sbjct: 182 SSGIKIGYGRTQGAAGGRDGTISQGGGC 209
>sp|Q6PHI9|RAB4A_DANRE Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2
Length = 213
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 151/195 (77%), Gaps = 4/195 (2%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y ++FK+++IG+ G GKSCLLHQF E++F D HTIGVEFG++II V + +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWD 63
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTD + L + N VI L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 123
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL+ R+V + EA +FA+EN+L+F+E SA+TGENVE+AF++ A+KI I+ G+L+
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 183
Query: 191 ESGVQHKERGGPASL 205
SG+Q+ G A+L
Sbjct: 184 GSGIQY----GDAAL 194
>sp|P53994|RAB2A_MOUSE Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1
Length = 212
Score = 244 bits (622), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 146/185 (78%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++WL D + +N N VI LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE R+V+ +E + FA E+ LIF+E SA T NVE+AF+ TAK+IY+ I++G + N
Sbjct: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNE 181
Query: 191 ESGVQ 195
+G++
Sbjct: 182 ANGIK 186
>sp|Q39570|YPTC4_CHLRE GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4
PE=3 SV=1
Length = 213
Score = 244 bits (622), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 146/193 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL D + NPN I LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKC 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL R V +E ++FA+E+ LIF+E SA T NVE+AF+ TAK+IY+ I+DG + +
Sbjct: 122 DLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNE 181
Query: 191 ESGVQHKERGGPA 203
G++ GG A
Sbjct: 182 SYGIKVGYGGGNA 194
>sp|Q90965|RAB2A_CHICK Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1
Length = 212
Score = 243 bits (621), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 146/185 (78%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++WL D + +N N VI LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE R+V+ +E + FA E+ LIF+E SA T NVE+AF+ TAK+IY+ I++G + N
Sbjct: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNE 181
Query: 191 ESGVQ 195
+G++
Sbjct: 182 ANGIK 186
>sp|Q5R6B6|RAB2A_PONAB Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1
Length = 212
Score = 243 bits (621), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 146/185 (78%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++WL D + +N N VI LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE R+V+ +E + FA E+ LIF+E SA T NVE+AF+ TAK+IY+ I++G + N
Sbjct: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNE 181
Query: 191 ESGVQ 195
+G++
Sbjct: 182 ANGIK 186
>sp|Q4R4X6|RAB2A_MACFA Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2
SV=1
Length = 212
Score = 243 bits (621), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 146/185 (78%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++WL D + +N N VI LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE R+V+ +E + FA E+ LIF+E SA T NVE+AF+ TAK+IY+ I++G + N
Sbjct: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNE 181
Query: 191 ESGVQ 195
+G++
Sbjct: 182 ANGIK 186
>sp|P61019|RAB2A_HUMAN Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1
Length = 212
Score = 243 bits (621), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 146/185 (78%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++WL D + +N N VI LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE R+V+ +E + FA E+ LIF+E SA T NVE+AF+ TAK+IY+ I++G + N
Sbjct: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNE 181
Query: 191 ESGVQ 195
+G++
Sbjct: 182 ANGIK 186
>sp|P61105|RAB2A_CANFA Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1
Length = 212
Score = 243 bits (621), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 146/185 (78%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++WL D + +N N VI LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE R+V+ +E + FA E+ LIF+E SA T NVE+AF+ TAK+IY+ I++G + N
Sbjct: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNE 181
Query: 191 ESGVQ 195
+G++
Sbjct: 182 ANGIK 186
>sp|Q01971|RAB2A_RABIT Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2
SV=1
Length = 212
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 146/185 (78%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++WL D + +N N VI LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE R+V+ +E + FA E+ LIF+E SA T NVE+AF+ TAK+IY+ I++G + N
Sbjct: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNE 181
Query: 191 ESGVQ 195
+G++
Sbjct: 182 ANGIK 186
>sp|P36863|YPTV4_VOLCA GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1
Length = 213
Score = 242 bits (618), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 150/211 (71%), Gaps = 3/211 (1%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL D + NPN I LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKC 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL R V +E ++FA+E+ LIF+E SA T NVE+AF+ TAK+IY+ I+DG + +
Sbjct: 122 DLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNE 181
Query: 191 ESGVQ---HKERGGPASLGDSSSSDKPNCSC 218
G++ GP + + + SC
Sbjct: 182 SYGIKVGYGAGNAGPQAAKPGEGDARKSSSC 212
>sp|P05712|RAB2A_RAT Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=1 SV=1
Length = 212
Score = 242 bits (618), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 146/185 (78%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P T+GVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++WL D + +N N VI LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE R+V+ +E + FA E+ LIF+E SA T NVE+AF+ TAK+IY+ I++G + N
Sbjct: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNE 181
Query: 191 ESGVQ 195
+G++
Sbjct: 182 ANGIK 186
>sp|P36409|RAB2A_DICDI Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A
PE=2 SV=2
Length = 207
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 145/207 (70%), Gaps = 3/207 (1%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
YS++FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWDT
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDT 61
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQE FR++TRSYYRG+AGAL+VYDITRR T+NHL+ WL D ++ N N I LIGNK D
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSD 121
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMTE 191
+E R V Y+E ++FA+EN LIF+E SA T NVE+AF+ TA KIY+ I+ G + N
Sbjct: 122 MESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQKGDFDINNES 181
Query: 192 SGVQHKERGGPASLGDSSSSDKPNCSC 218
G++ G P S D + C
Sbjct: 182 FGIK---LGAPTSKQDGTDQKPAGGGC 205
>sp|Q8WUD1|RAB2B_HUMAN Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1
Length = 216
Score = 241 bits (615), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 153/201 (76%), Gaps = 1/201 (0%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL D + ++ N VI LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE RDV+ +E + FA E+ LIF+E SA T NVE+AF+ TAK+IY+ I+ G + +
Sbjct: 122 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNE 181
Query: 191 ESGVQ-HKERGGPASLGDSSS 210
+G++ ++ S+G S+S
Sbjct: 182 ANGIKIGPQQSISTSVGPSAS 202
>sp|P59279|RAB2B_MOUSE Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1
Length = 216
Score = 240 bits (613), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 154/214 (71%), Gaps = 6/214 (2%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL D + ++ N VI LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE RDV+ +E + FA E+ LIF+E SA T NVE+A++ TAK+IY+ I+ G + +
Sbjct: 122 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHNE 181
Query: 191 ESGVQHKERG------GPASLGDSSSSDKPNCSC 218
+G++ + GP S + S P+ C
Sbjct: 182 ANGIKIGPQQSITSSVGPCSPQQNVSDIGPDSGC 215
>sp|P92963|RAB1C_ARATH Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=2
SV=1
Length = 211
Score = 240 bits (612), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 150/208 (72%), Gaps = 2/208 (0%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL D + N N I LIGNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL R V +E ++FA+E+ LIF+EASA T +NVE+AF++TA IY+ I+DG + +
Sbjct: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
Query: 191 ESGVQHKERG--GPASLGDSSSSDKPNC 216
G++ G GP+ D S+S C
Sbjct: 182 SYGIKVGYGGIPGPSGGRDGSTSQGGGC 209
>sp|P49103|RAB2A_MAIZE Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1
Length = 209
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 142/185 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL D + N N I L+GNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKC 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL R V Y+E ++FA+E+ LIF+EASA T +NVE+AF++TA IY+ I+DG + +
Sbjct: 122 DLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNE 181
Query: 191 ESGVQ 195
G++
Sbjct: 182 SYGIK 186
>sp|P49104|RAB2B_MAIZE Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1
Length = 210
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 142/185 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL D + N N I L+GNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKC 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DL R V Y+E ++FA+E+ LIF+EASA T +NVE+AF++TA IY+ I+DG + +
Sbjct: 122 DLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNE 181
Query: 191 ESGVQ 195
G++
Sbjct: 182 SYGIK 186
>sp|O23561|RAB1A_ARATH Ras-related protein RABB1a OS=Arabidopsis thaliana GN=RABB1A PE=2
SV=1
Length = 205
Score = 223 bits (569), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 143/208 (68%), Gaps = 5/208 (2%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
SY+Y FKYIIIGD GVGKSCLL +FT+++F TIGVEFG + I + + IKLQIWD
Sbjct: 2 SYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE FR+VTRSYYRG AG L+VYDITRR T+NHL+SWL + + + N LIGNK
Sbjct: 62 TAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKC 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE R V +E ++FA E+ LIF+EASA T NVE+AF+ETA IY+ I+DG ++
Sbjct: 122 DLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVD-EAN 180
Query: 191 ESGVQHKERGGPASLGDSSSSDKPNCSC 218
E G+ GP D+SSS + C
Sbjct: 181 EPGITP----GPFGGKDASSSQQRRGCC 204
>sp|Q54DA7|RAB4_DICDI Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3
SV=1
Length = 205
Score = 216 bits (551), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 138/205 (67%), Gaps = 5/205 (2%)
Query: 14 YIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAG 73
Y+ K+IIIG VGKSCLL +F + KF HTIGV+F +R++++ G+ +KLQIWDTAG
Sbjct: 6 YLVKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAG 65
Query: 74 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLE 133
QERFR+V SYYRG+AG +VYD+T R +YNH+++WL+D K+L +P+ I L+GNK DL
Sbjct: 66 QERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLT 125
Query: 134 GSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMTESG 193
R+V + EA + A+EN L+F+E SA+TGE VE+ FL+ + I I G++ N+ G
Sbjct: 126 EQREVTFLEASRIAQENGLLFMETSALTGEGVEEMFLKCTRTIMTKIDSGEV--NLEHLG 183
Query: 194 VQHKERGGPASLGDSSSSDKPNCSC 218
VQ G + D NCSC
Sbjct: 184 VQISSDSGNVT---KKPGDSSNCSC 205
>sp|Q559X6|RAB2B_DICDI Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B
PE=3 SV=1
Length = 202
Score = 199 bits (507), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 129/171 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
SY ++FKYI++GD VGKS LL QF +++F P+ TIGVEFG+R I ++ ++IKLQIWD
Sbjct: 20 SYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWD 79
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQE+FR++TR+YYRGA A++VYDITRR ++ L+SWLTD + ++ + LIGNK
Sbjct: 80 TAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKA 139
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIK 181
DLE +R V EAK+FAE+N L+F E SA T NV++AF ++ ++I + ++
Sbjct: 140 DLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLE 190
>sp|Q9GP33|RAB4A_ECHMU Probable Ras-related protein Rab-4A OS=Echinococcus multilocularis
PE=2 SV=1
Length = 223
Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 129/188 (68%), Gaps = 3/188 (1%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
+ Y+FK++IIG+ G GK+C+L ++TE+KF P+ HTIG EFG+R+I V G +K+QIWDT
Sbjct: 6 FDYLFKFLIIGNAGTGKTCILRRYTERKFFPNTQHTIGAEFGSRVISVDGTHVKIQIWDT 65
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQERFR++ RSYY A G L+VYDIT R+++ + WL D ++L P V+ L+GNK D
Sbjct: 66 AGQERFRSMARSYYHDAVGTLLVYDITNRTSFGAVEQWLGDARHLATPGVVVILVGNKKD 125
Query: 132 LEGSR-DVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNAN-- 188
L + V + EA FA+EN L F+E SA+TGEN++ AF + + +K G+L A+
Sbjct: 126 LRDTDGQVTHWEANTFAQENGLQFIETSALTGENIDDAFTSCVRVLLSKVKSGELGADRL 185
Query: 189 MTESGVQH 196
+ S QH
Sbjct: 186 LVGSNKQH 193
>sp|P38555|YPT31_YEAST GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT31 PE=1 SV=3
Length = 223
Score = 192 bits (489), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 135/207 (65%), Gaps = 3/207 (1%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 69
Y Y +FK ++IGD GVGKS LL +FT+ +F D TIGVEF TR +E+ G++IK QIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 70 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNK 129
DTAGQER+RA+T +YYRGA GAL+VYDI++ S+Y + + WL++ + + N + LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNK 127
Query: 130 MDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANM 189
DL R V +E+K FA+EN L+F E SA+ ENV++AF E IYQ + ++ ++
Sbjct: 128 SDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQM--DL 185
Query: 190 TESGVQHKERGGPASLGDS-SSSDKPN 215
+S G A G + S + PN
Sbjct: 186 GDSSANGNANGASAPNGPTISLTPTPN 212
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 131/207 (63%), Gaps = 2/207 (0%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR + V + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQER+RA+T +YYRGA GAL+VYD+TR ST+ ++ +WL + +N T+PN V+ L+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMTE 191
L V+ ++AK FAE+ L F+E SA+ NVE AF E +I+ + + A
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189
Query: 192 SGVQHKERGGPASLGDSSSSDKPNCSC 218
+ V K G +G S+ K C
Sbjct: 190 ANVPSK--GDKIDIGKDVSAVKKGGCC 214
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 191 bits (485), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 137/208 (65%), Gaps = 3/208 (1%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDT 68
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQER+RA+T +YYRGA GAL+VYD+T+ +T+ ++S WL + ++ + N VI LIGNK D
Sbjct: 69 AGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTD 128
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMTE 191
L+ R V ++A+ +AE+ L F+E SA+ NVE+AF ++Y+ I ++++ T
Sbjct: 129 LKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTT 188
Query: 192 SGVQHKERGGPASLGDSSSSD--KPNCS 217
+ KE G + +S S+ KP CS
Sbjct: 189 ANANIKE-GQTIDVAATSESNAKKPCCS 215
>sp|P51996|YPT32_YEAST GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT32 PE=1 SV=3
Length = 222
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 69
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV +KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 70 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNK 129
DTAGQER+RA+T +YYRGA GAL+VYDI++ S+Y + + WLT+ + + N + LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNK 127
Query: 130 MDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANM 189
DL R V DEAK FA EN ++F E SA+ +NV++AF E I+Q + K ++
Sbjct: 128 SDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMV--SKHQVDL 185
Query: 190 TESGVQHK-ERGGP 202
+ SG + G P
Sbjct: 186 SGSGTNNMGSNGAP 199
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 190 bits (482), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 119/167 (71%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR ++V G+ +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDT 69
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQER+RA+T +YYRGA GAL+VYD+TRR+T+ ++ WL + KN T+PN V+ L+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSD 129
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
L V ++ K +AE+ L F+E SA+ NVE AF E +IY+
Sbjct: 130 LRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYR 176
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 190 bits (482), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 117/167 (70%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G+ +K QIWDT
Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDT 70
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQER+RA+T +YYRGA GAL+VYD+TR ST+ ++ WL + ++ T+PN V+ L+GNK D
Sbjct: 71 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSD 130
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
L V+ DE K FAE L F+E SA+ NVE AF E +IY+
Sbjct: 131 LRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYR 177
>sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3
Length = 218
Score = 187 bits (476), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 117/167 (70%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQER+RA+T +YYRGA GAL+VYDI + TY ++ WL + ++ + N VI L+GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
L R V DEA+ FAE+N+L F+E SA+ NVE+AF +IY+
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYR 174
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 187 bits (476), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 117/167 (70%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQER+RA+T +YYRGA GAL+VYDI + TY ++ WL + ++ + N VI L+GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
L R V DEA+ FAE+N+L F+E SA+ NVE+AF +IY+
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYR 174
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 187 bits (476), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 117/167 (70%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQER+RA+T +YYRGA GAL+VYDI + TY ++ WL + ++ + N VI L+GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
L R V DEA+ FAE+N+L F+E SA+ NVE+AF +IY+
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYR 174
>sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3
Length = 218
Score = 187 bits (476), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 117/167 (70%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQER+RA+T +YYRGA GAL+VYDI + TY ++ WL + ++ + N VI L+GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
L R V DEA+ FAE+N+L F+E SA+ NVE+AF +IY+
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYR 174
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 187 bits (475), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 117/167 (70%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQER+RA+T +YYRGA GAL+VYDI + TY ++ WL + ++ + N VI L+GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSD 127
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
L R V DEA+ FAE+N+L F+E SA+ NVE+AF +IY+
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYR 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,118,140
Number of Sequences: 539616
Number of extensions: 3196642
Number of successful extensions: 12720
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 277
Number of HSP's that attempted gapping in prelim test: 10873
Number of HSP's gapped (non-prelim): 1310
length of query: 218
length of database: 191,569,459
effective HSP length: 113
effective length of query: 105
effective length of database: 130,592,851
effective search space: 13712249355
effective search space used: 13712249355
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)