RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1169
(218 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 170 bits (431), Expect = 1e-54
Identities = 71/171 (41%), Positives = 109/171 (63%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y Y+FK ++IGD GVGK+C+L +F+E F TIG++F R IE+ G++IKLQIWD
Sbjct: 2 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 61
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR +T +YYRGA G ++VYDIT +++++ +W+ + + + + ++GNK
Sbjct: 62 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKC 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIK 181
D+ R V + +K A + + F+E SA NVE AF A+ I +
Sbjct: 122 DVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMD 172
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 166 bits (420), Expect = 4e-53
Identities = 75/166 (45%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 15 IFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQ 74
I K ++IGD GVGKSCLL +F E KF P TIG++F + ++++G+K+KLQIWDTAGQ
Sbjct: 2 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQ 61
Query: 75 ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEG 134
ERFR +T +YYRGA G ++VYDIT T+ ++ W N + L+GNK D+E
Sbjct: 62 ERFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDME- 120
Query: 135 SRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNI 180
+R V D+ + A+E + F+E+SA +NV + F AK I + I
Sbjct: 121 TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 166
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 161 bits (409), Expect = 2e-51
Identities = 147/166 (88%), Positives = 154/166 (92%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIKLQIWDT
Sbjct: 1 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 60
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD +NLTNPNTVI LIGNK D
Sbjct: 61 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 120
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIY 177
LE RDV Y+EAK+FAEEN L+F+EASA TGENVE AFLE AKKIY
Sbjct: 121 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIY 166
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 160 bits (406), Expect = 8e-51
Identities = 69/169 (40%), Positives = 113/169 (66%), Gaps = 1/169 (0%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDC-PHTIGVEFGTRIIEVHGEKIKLQIW 69
Y FK +++GD GVGK+CLL +F + F+ T+G++F ++++V G K+KLQ+W
Sbjct: 2 FYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMW 61
Query: 70 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNK 129
DTAGQERFR+VT +YYR A L++YD+T +++++++ +WLT+ + + L+GNK
Sbjct: 62 DTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNK 121
Query: 130 MDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
+D R V+ ++ +K A+E L F+E SA TG NV+ AF AK++ +
Sbjct: 122 VDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKR 170
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 160 bits (404), Expect = 3e-50
Identities = 80/177 (45%), Positives = 117/177 (66%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y Y+FK ++IG+ GVGKSCLL +F++ + D TIGV+F + +E+ G+ +KLQIWDT
Sbjct: 3 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 62
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQERFR +T SYYRG+ G ++VYD+T + ++N + WL + + L+GNK D
Sbjct: 63 AGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCD 122
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNAN 188
L+ R V YD AK+FA+ N + F+E SA+ NVE AFL A++I +++ LN
Sbjct: 123 LKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNET 179
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 158 bits (400), Expect = 6e-50
Identities = 108/174 (62%), Positives = 141/174 (81%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 1 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 60
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
TAGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTD + L + N VI L GNK
Sbjct: 61 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 120
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGK 184
DL+ R+V + EA +FA+EN+L+F+E SA+TGENVE+AF++ A+KI I+ G+
Sbjct: 121 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGE 174
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 158 bits (399), Expect = 9e-50
Identities = 72/170 (42%), Positives = 113/170 (66%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y ++FK ++IG+ GVGK+CL+ +FT+ F P TIGV+F + +E++GEK+KLQIWDT
Sbjct: 2 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 61
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQERFR++T+SYYR A ++ YDIT ++ L WL + + + + L+GNK+D
Sbjct: 62 AGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKID 121
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIK 181
L R+V A++F+E D+ ++E SA +NVE+ FL+ A ++ +
Sbjct: 122 LAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 171
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 153 bits (386), Expect = 1e-47
Identities = 75/164 (45%), Positives = 106/164 (64%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K +IIG+ GVGKS LL +FT+ F P+ TIGV+F + I V G K KL IWDTAGQE
Sbjct: 8 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 67
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGS 135
RFR +T SYYRGA G ++VYD+TRR T+ L +WL + + N ++ ++ + +
Sbjct: 68 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKEN 127
Query: 136 RDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQN 179
R+V +E KFA ++ ++F+EASA T + V+ AF E +KI Q
Sbjct: 128 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQT 171
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 152 bits (385), Expect = 1e-47
Identities = 88/174 (50%), Positives = 119/174 (68%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 1 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 60
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQER+R +T +YYRGA GAL+VYDI + TY ++ WL + ++ + N VI L+GNK D
Sbjct: 61 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 120
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKL 185
L R V DEA+ FAE+N+L F+E SA+ NVE+AF +IY+ + ++
Sbjct: 121 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 174
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 151 bits (383), Expect = 2e-47
Identities = 65/167 (38%), Positives = 99/167 (59%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
+ Y+FK +IIG+ VGK+ L ++ + F P T+G++F + I + ++IKLQIWDT
Sbjct: 2 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 61
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
AGQER+R +T +YYRGA G +++YDIT ++N + W T K + N + L+GNK D
Sbjct: 62 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 121
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
+E R V + ++ A+ F EASA NV+Q F I +
Sbjct: 122 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICE 168
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 151 bits (382), Expect = 4e-47
Identities = 110/171 (64%), Positives = 137/171 (80%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 72
SY+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWDTA
Sbjct: 1 SYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTA 60
Query: 73 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDL 132
GQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL D + ++ N VI LIGNK DL
Sbjct: 61 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDL 120
Query: 133 EGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDG 183
E RDV+ +E + FA E+ LIF+E SA T NVE+AF+ TAK+IY+ I+ G
Sbjct: 121 ESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQG 171
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 146 bits (370), Expect = 3e-45
Identities = 61/181 (33%), Positives = 106/181 (58%), Gaps = 11/181 (6%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGE--------- 62
Y Y+ K + +GD GVGK+ L+++T+ KF P T+G++F + + + +
Sbjct: 2 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 61
Query: 63 -KIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL-SSWLTDTKNLTNPN 120
K+ LQ+WDTAGQERFR++T +++R A G L+++D+T + ++ ++ + N N
Sbjct: 62 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 121
Query: 121 TVIFLIGNKMDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNI 180
I LIGNK DL R+V +A++ A++ + + E SA TG+NVE+A I + +
Sbjct: 122 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 181
Query: 181 K 181
+
Sbjct: 182 E 182
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 133 bits (335), Expect = 3e-40
Identities = 60/161 (37%), Positives = 98/161 (60%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
FK + +G+ VGK+ L+ +F F TIG++F ++ + + I+LQ+WDTAGQE
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 60
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGS 135
RFR++ SY R +A A++VYDIT +++ + W+ D + + +I L+GNK DL
Sbjct: 61 RFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADK 120
Query: 136 RDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
R V +E ++ A+E +++F+E SA G NV+Q F A +
Sbjct: 121 RQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 161
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 133 bits (335), Expect = 3e-40
Identities = 66/164 (40%), Positives = 102/164 (62%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
FK +++G+ VGKS L+ +F + +F TIG F T+ + + +K +IWDTAGQE
Sbjct: 7 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 66
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGS 135
R+ ++ YYRGA A++VYDIT ++ +W+ + + +PN VI L GNK DL
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 126
Query: 136 RDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQN 179
R V + EA+ +A++N L+F+E SA T NV + F+ AKK+ +N
Sbjct: 127 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKN 170
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 129 bits (325), Expect = 8e-39
Identities = 57/166 (34%), Positives = 98/166 (59%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 72
+Y FK +++G+ VGK+ L+ ++ E KF T+G F T+ + + G+++ L IWDTA
Sbjct: 1 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTA 60
Query: 73 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDL 132
GQERF A+ YYR + GA++VYDIT ++ + +W+ + + + + ++GNK+DL
Sbjct: 61 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDL 120
Query: 133 EGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
E R V EA+ +AE SA + +E+ FL+ K++ +
Sbjct: 121 EKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE 166
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 121 bits (304), Expect = 1e-35
Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 6/171 (3%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 72
S +FK I++GD GVGKS L++++ KF HTIGVEF + +EV G + +QIWDTA
Sbjct: 4 SSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTA 63
Query: 73 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTN----PNTVIFLIGN 128
GQERFR++ +YRG+ L+ + + ++ +LS+W + + + ++GN
Sbjct: 64 GQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGN 123
Query: 129 KMDLEGSRDVRYDEAKKFAEEN-DLIFVEASAMTGENVEQAFLETAKKIYQ 178
K+D+ R V +EA+ + +N D + E SA NV AF E +++
Sbjct: 124 KIDIS-ERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLA 173
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 121 bits (303), Expect = 2e-35
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
+K +++G GVGKS L QF F+ TI +F + IEV L+I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTE 62
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTN-PNTVIFLIGNKMDLEG 134
+F ++ Y + G ++VY + + ++ + + + L+GNK+DLE
Sbjct: 63 QFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLES 122
Query: 135 SRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
R+V E + AEE F+E SA + V++ F E +++
Sbjct: 123 EREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQMNY 166
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 117 bits (292), Expect = 7e-34
Identities = 66/161 (40%), Positives = 99/161 (61%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K ++GD GVGKS ++ +F E F P+ TIG F T+ ++ E K IWDTAG E
Sbjct: 5 LKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLE 64
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGS 135
RFRA+ YYRG+A A++VYDIT+ T++ L +W+ + + P+ V+ + GNK DL
Sbjct: 65 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDV 124
Query: 136 RDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
R+V +AK +A+ IFVE SA N+ + F+E +++I
Sbjct: 125 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 165
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 117 bits (293), Expect = 1e-33
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K +++GD VGK+CLL +T KF + T+ + + + GE L ++DTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVF-DNYAVTVMIGGEPYTLGLFDTAGQE 62
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGS 135
+ + Y L+ + + S++ ++ P T L+G ++DL
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122
Query: 136 RDV------------RYDEAKKFAEE-NDLIFVEASAMTGENVEQAFLETAKKIYQNIKD 182
+ A+K A + + +VE SA+T + ++ F E + +
Sbjct: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEP 182
Query: 183 GK 184
K
Sbjct: 183 KK 184
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 116 bits (290), Expect = 3e-33
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 17/186 (9%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 63
M+ + + K +++GD VGK+CLL + F + T+ + + V G++
Sbjct: 1 MAHG---PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQ 56
Query: 64 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVI 123
L ++DTAGQE + + Y L+ + + +++ ++ PN
Sbjct: 57 YLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPF 116
Query: 124 FLIGNKMDL------------EGSRDVRYDEAKKFAEE-NDLIFVEASAMTGENVEQAFL 170
LIG ++DL + + ++ +K A+E +VE SA+T + ++ F
Sbjct: 117 LLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176
Query: 171 ETAKKI 176
E I
Sbjct: 177 EAIIAI 182
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 114 bits (286), Expect = 7e-33
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 2/164 (1%)
Query: 15 IFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQ 74
+ K I++G GVGKS L QF +F+ D T + +++ E I DTAGQ
Sbjct: 4 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQI-DILDTAGQ 62
Query: 75 ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD-TKNLTNPNTVIFLIGNKMDLE 133
E + A+ +Y+R G L V+ IT ++ + + + + N L+GNK DLE
Sbjct: 63 EDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLE 122
Query: 134 GSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIY 177
R V +EAK A++ ++ +VE SA T NV++ F + ++I
Sbjct: 123 DKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIR 166
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 114 bits (285), Expect = 1e-32
Identities = 63/163 (38%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 17 KYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQER 76
K +++G+ VGKS ++ +F F + TIG F T+ + ++ +K +IWDTAGQER
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 77 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDL---E 133
F ++ YYR A AL+VYD+T+ ++ W+ + + + +I L+GNK+D+
Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEG 124
Query: 134 GSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
G R V +E +K AEE L+F E SA TGENV FL +KI
Sbjct: 125 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 167
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 113 bits (284), Expect = 1e-32
Identities = 64/164 (39%), Positives = 100/164 (60%), Gaps = 5/164 (3%)
Query: 15 IFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQ 74
IFK I+IGD VGK+CL ++F +F TIGV+F R +++ GE+IK+Q+WDTAGQ
Sbjct: 2 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQ 61
Query: 75 ERF-RAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTK-NLTNPNTVIFLIGNKMDL 132
ERF +++ + YYR + VYD+T ++++ L +W+ + K +L + L+GNK DL
Sbjct: 62 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDL 121
Query: 133 EGSRDVRYDEAKKFAEENDLIFVEASAMT---GENVEQAFLETA 173
+ V D A+KFA+ + + E SA ++VE F+ A
Sbjct: 122 RSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLA 165
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 113 bits (283), Expect = 2e-32
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K +++GD VGK+CLL +T F + T+ + + + V G+ + L +WDTAGQE
Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQE 64
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGS 135
+ + Y +L+ + + +++ ++ + PNT I L+G K+DL
Sbjct: 65 DYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDD 124
Query: 136 RDVR------------YDEAKKFAEE-NDLIFVEASAMTGENVEQAFLETAKKIYQ 178
+D Y + A+E + ++E SA+T ++ F E + +
Sbjct: 125 KDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLC 180
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 112 bits (280), Expect = 6e-32
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
+K +++G GVGKS L Q + F+ + TI + +++ E L I DTAGQE
Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDG-ETCLLDILDTAGQE 62
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTN-PNTVIFLIGNKMDLEG 134
+ A+ Y R G L V+ I ++ + + K + + + + L+GNK D
Sbjct: 63 EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD-LA 121
Query: 135 SRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQN 179
+R V +A+ A + ++E SA T + VE AF ++I Q+
Sbjct: 122 ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH 166
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 112 bits (279), Expect = 1e-31
Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Query: 15 IFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQ 74
+ K II+GD GVGK+ L++Q+ +KF TIG +F T+ + V + +QIWDTAGQ
Sbjct: 2 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 61
Query: 75 ERFRAVTRSYYRGAAGALMVYDITRR----STYNHLSSWLTDTKNLTNPNTVIFLIGNKM 130
ERF+++ ++YRGA ++V+D+T + + +L N ++GNK+
Sbjct: 62 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
DLE + +N++ + E SA NVEQAF A+ + + +L
Sbjct: 122 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFP 181
Query: 191 E 191
E
Sbjct: 182 E 182
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 110 bits (274), Expect = 4e-31
Identities = 52/164 (31%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
+K +++G GVGKS L QF + F+ TI + + +EV ++ L+I DTAG E
Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDCQQCMLEILDTAGTE 62
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTN-PNTVIFLIGNKMDLEG 134
+F A+ Y + G +VY IT +ST+N L + + + + L+GNK DLE
Sbjct: 63 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLED 122
Query: 135 SRDVRYDEAKKFAEE-NDLIFVEASAMTGENVEQAFLETAKKIY 177
R V ++ + A + + F+E+SA + NV + F + ++I
Sbjct: 123 ERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQIN 166
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 109 bits (272), Expect = 9e-31
Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 72
S K +++G GVGKS L QF + F+ D + T+I V G +L I DTA
Sbjct: 4 SETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDP-TIEDSYTKICSVDGIPARLDILDTA 62
Query: 73 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTN-PNTVIFLIGNKMD 131
GQE F A+ Y R G L+V+ I R ++N + T + + + + L+GNK D
Sbjct: 63 GQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKAD 122
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIK 181
LE R V EA F + + + EASA NV++AF + + + + +
Sbjct: 123 LESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQE 172
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 108 bits (271), Expect = 1e-30
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 2/164 (1%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
++ +++G GVGKS L QF + F+ D TI + T+ + +L I DTAGQE
Sbjct: 6 YRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIE-DSYTKQCVIDDRAARLDILDTAGQE 64
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDT-KNLTNPNTVIFLIGNKMDLEG 134
F A+ Y R G L+V+ +T R ++ + + + + LIGNK DL+
Sbjct: 65 EFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDH 124
Query: 135 SRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
R V +E ++ A + + ++EASA NV+QAF E + I +
Sbjct: 125 QRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRK 168
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 107 bits (266), Expect = 6e-30
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 17 KYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQER 76
K +++G+ VGKS ++ ++ + F D TIGV+F R I+V+ E ++L +WDTAGQE
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 77 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGSR 136
F A+T++YYRGA ++V+ T R ++ S + + L+ NK+DL
Sbjct: 64 FDAITKAYYRGAQACVLVFSTTDRESFEA-ISSWREKVVAEVGDIPTALVQNKIDLLDDS 122
Query: 137 DVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
++ +EA+ A+ L F S NV + F A+K Q
Sbjct: 123 CIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQ 164
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 105 bits (261), Expect = 3e-29
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
+K +++GD GVGKS L QF ++ F+PD TI + + + L + DTAGQE
Sbjct: 5 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDN-QWAILDVLDTAGQE 63
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTY-NHLSSWLTDTKNLTNPNTVIFLIGNKMDLEG 134
F A+ Y R G L+VY +T ++++ + + + + L+ NK+DL
Sbjct: 64 EFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMH 123
Query: 135 SRDVRYDEAKKFAEENDLIFVEASAMTGE-NVEQAFLETAKKIYQ 178
R V D+ K+ A + ++ ++E SA NV++ F + + I Q
Sbjct: 124 LRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQ 168
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 102 bits (255), Expect = 3e-28
Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 13/170 (7%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
+ +++G GK+ +L++ + + P G + V + +K +WD GQ+
Sbjct: 13 MRILMLGLDAAGKTTILYKLKLGQSVTTIPTV-----GFNVETVTYKNVKFNVWDVGGQD 67
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD-TKNLTNPNTVIFLIGNKMDLEG 134
+ R + R YY G G + V D R + L + + +I + NK DL
Sbjct: 68 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 127
Query: 135 SR---DVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIK 181
+ +++ + + + A +G+ + + + N K
Sbjct: 128 AMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGL----TWLTSNYK 173
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 102 bits (255), Expect = 3e-28
Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 14/176 (7%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K +I+GD GK+CLL ++ +F T+ E IEV G++++L +WDTAG E
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAGLE 61
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGS 135
+ + Y LM + I + ++ T PN I L+GNK DL
Sbjct: 62 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 121
Query: 136 RDVR------------YDEAKKFAEE-NDLIFVEASAMTGENVEQAFLETAKKIYQ 178
R +E + A ++E SA T + V + F + Q
Sbjct: 122 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 177
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 102 bits (253), Expect = 5e-28
Identities = 28/164 (17%), Positives = 60/164 (36%), Gaps = 9/164 (5%)
Query: 17 KYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQER 76
+ +++G GK+ +L++ + T G + V + I +WD GQ++
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEI-----VTTIPTIGFNVETVEYKNISFTVWDVGGQDK 56
Query: 77 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDT-KNLTNPNTVIFLIGNKMDLEGS 135
R + R Y++ G + V D R N L + V+ + NK DL +
Sbjct: 57 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 116
Query: 136 ---RDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
++ + A +G+ + + + ++
Sbjct: 117 MNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 102 bits (254), Expect = 5e-28
Identities = 60/174 (34%), Positives = 100/174 (57%), Gaps = 7/174 (4%)
Query: 15 IFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI-KLQIWDTAG 73
I K II+GD GVGK+ L+H++ K+ TIG +F T+ + V G+K+ +Q+WDTAG
Sbjct: 2 ILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAG 61
Query: 74 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNT----VIFLIGNK 129
QERF+++ ++YRGA ++VYD+T S++ ++ SW + N N+ ++GNK
Sbjct: 62 QERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNK 121
Query: 130 MDLEGSRDVRYDEAKKF--AEENDLIFVEASAMTGENVEQAFLETAKKIYQNIK 181
+D E S+ + +++ + D+ SA NV+ AF E A+ Q +
Sbjct: 122 IDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQ 175
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 100 bits (249), Expect = 3e-27
Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 13/174 (7%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
+ +I+G G GK+ +L++ + + P G + + + +KL +WD GQ
Sbjct: 18 LRILILGLDGAGKTTILYRLQIGEVVTTKPT-----IGFNVETLSYKNLKLNVWDLGGQT 72
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD-TKNLTNPNTVIFLIGNKMDLEG 134
R R YY A + V D T + + S L + + + + NK D G
Sbjct: 73 SIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPG 132
Query: 135 SRDVR---YDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKL 185
+ + ++ V +SA+ GE + + + IK+ +L
Sbjct: 133 ALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGL----DWLIDVIKEEQL 182
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 99.7 bits (247), Expect = 4e-27
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
FK +++GD G GK+ + + +F T+GVE + + IK +WDTAGQE
Sbjct: 4 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 63
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGS 135
+F + YY A A++++D+T R TY ++ +W D N I L GNK+D++
Sbjct: 64 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCENIPIVLCGNKVDIKDR 122
Query: 136 RDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQN 179
+ F + +L + + SA + N E+ FL A+K+ +
Sbjct: 123 KVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGD 164
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 99.0 bits (245), Expect = 9e-27
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 15/176 (8%)
Query: 17 KYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQER 76
K +++GD GK+ LLH F + F + T+ E T E+ ++I+L +WDT+G
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTV-FENYTASFEIDTQRIELSLWDTSGSPY 62
Query: 77 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGS- 135
+ V Y + L+ +DI+R T + + PNT + L+G K DL
Sbjct: 63 YDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDV 122
Query: 136 -----------RDVRYDEAKKFAEE-NDLIFVEASAMTGEN-VEQAFLETAKKIYQ 178
V YD+ A++ ++E SA+ EN V F
Sbjct: 123 STLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN 178
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 97.0 bits (240), Expect = 4e-26
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K I G GVGKS L+ +F ++F+ + T+ + + E + ++I DTAGQE
Sbjct: 3 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDD-EVVSMEILDTAGQE 61
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGS 135
G L+ R S L + N + L+GNK DL+ S
Sbjct: 62 DTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHS 121
Query: 136 RDVRYDEAKKFAEENDLIFVEASAMTGE-NVEQAFLETAKKIYQ 178
R V +E +K A E F E SA TGE N+ + F E +++ +
Sbjct: 122 RQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRR 165
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 97.4 bits (241), Expect = 4e-26
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
++ + G GVGKS L+ +F + F T+ + ++I LQI DT G
Sbjct: 3 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTY-RQVISCDKSICTLQITDTTGSH 61
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTN--PNTVIFLIGNKMDLE 133
+F A+ R ++VY IT R + L + + I L+GNK D
Sbjct: 62 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDES 121
Query: 134 GSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQN 179
SR+V+ EA+ A F+E SA NV++ F E +
Sbjct: 122 PSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRR 167
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 94.7 bits (234), Expect = 4e-25
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 9/165 (5%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K II+G GK+ +L+QF+ + + P G+ + E+ + +WD GQE
Sbjct: 16 HKVIIVGLDNAGKTTILYQFSMNEVVHTSPT-----IGSNVEEIVINNTRFLMWDIGGQE 70
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFL-IGNKMDLEG 134
R+ +YY ++V D T R + L + L NK D++
Sbjct: 71 SLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKE 130
Query: 135 S---RDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
++ +++ A+TGE + Q ++
Sbjct: 131 CMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 175
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 91.3 bits (225), Expect = 6e-24
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
Query: 15 IFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQ 74
++K +++G GVGKS L F + P+ R I V GE+ L ++D Q
Sbjct: 1 VYKVLLLGAPGVGKSALARIFGGVEDGPE--AEAAGHTYDRSIVVDGEEASLMVYDIWEQ 58
Query: 75 ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFL-IGNKMDLE 133
+ R + ++VY +T + ++ S + + V + +GNK DL
Sbjct: 59 DGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLV 118
Query: 134 GSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIK 181
SR+V DE + A D F+E SA NV+ F ++I
Sbjct: 119 RSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLRRD 166
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 90.8 bits (224), Expect = 1e-23
Identities = 36/170 (21%), Positives = 59/170 (34%), Gaps = 9/170 (5%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 70
+ + +++G GK+ LL Q + P G I V + KL +WD
Sbjct: 12 APDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQ-----GFNIKSVQSQGFKLNVWD 66
Query: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDT-KNLTNPNTVIFLIGNK 129
GQ + R RSY+ + V D R + LT+ + + + NK
Sbjct: 67 IGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANK 126
Query: 130 MDLEGSRD---VRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
DL + + + SA+TGE V+ K +
Sbjct: 127 QDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 176
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 89.7 bits (221), Expect = 3e-23
Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 9/165 (5%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
+ +++G GK+ +L +F + TI G I + KL IWD GQ+
Sbjct: 3 LRLLMLGLDNAGKTTILKKFNGEDV-----DTISPTLGFNIKTLEHRGFKLNIWDVGGQK 57
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD-TKNLTNPNTVIFLIGNKMDLEG 134
R+ R+Y+ G + V D R L + + NK DL G
Sbjct: 58 SLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPG 117
Query: 135 SRDVRYDEAK---KFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
+ + + SA+TGE++ I
Sbjct: 118 ALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDI 162
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 89.4 bits (220), Expect = 3e-23
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 72
S K I+G VGKS L QF E +F+ TI F T++I V+G++ LQ+ DTA
Sbjct: 2 SKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKLITVNGQEYHLQLVDTA 60
Query: 73 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTK-NLTNPNTVIFLIGNKMD 131
GQ+ + ++Y G ++VY +T ++ + + I L+GNK D
Sbjct: 61 GQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKD 120
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
L R + Y+E K AE + F+E+SA + F +
Sbjct: 121 LHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEA 165
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 89.3 bits (220), Expect = 6e-23
Identities = 33/173 (19%), Positives = 61/173 (35%), Gaps = 7/173 (4%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
+ ++GD GKS L+H+F + E + + V G+ + I + AG
Sbjct: 6 LRLGVLGDARSGKSSLIHRFLTGSY--QVLEKTESEQYKKEMLVDGQTHLVLIREEAGAP 63
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD--LE 133
+ + + D + L L+ + + L+G +
Sbjct: 64 DAK--FSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISAS 121
Query: 134 GSRDVRYDEAKKFA-EENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKL 185
R V A+ + + E A G NV++ F E A+K+ K +L
Sbjct: 122 SPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQL 174
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 84.7 bits (208), Expect = 3e-21
Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 16/164 (9%)
Query: 17 KYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQER 76
K + +G GK+ LLH + T+ + E+ IK +D G +
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLA-----TLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 56
Query: 77 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD-TKNLTNPNTVIFLIGNKMDLEGS 135
R + + Y+ G + + D ++ L + ++GNK+D +
Sbjct: 57 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNA 116
Query: 136 RDVR----------YDEAKKFAEENDLIFVEASAMTGENVEQAF 169
+++ + + S + +AF
Sbjct: 117 VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAF 160
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 82.8 bits (203), Expect = 1e-20
Identities = 29/170 (17%), Positives = 69/170 (40%), Gaps = 12/170 (7%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
+ ++G GK+ ++ +F D T+G ++ + +++WD GQ
Sbjct: 3 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNM----RKITKGNVTIKLWDIGGQP 58
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNP-NTVIFLIGNKMDLEG 134
RFR++ Y RG + + + D + + L + + + ++GNK DL G
Sbjct: 59 RFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPG 118
Query: 135 S---RDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIK 181
+ +++ ++ ++ S +N++ + + Q+ K
Sbjct: 119 ALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITL----QWLIQHSK 164
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 82.5 bits (202), Expect = 2e-20
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
Query: 14 YIFKYIIIGDMGVGKSCLLHQFTEQKF-MPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 72
++ ++IG+ GVGKS L + F M +G + R + V GE + + D
Sbjct: 2 TYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMW 61
Query: 73 -GQERFRAVTRSYYRGAAGALMVYDITRRSTY-NHLSSWLTDTKNLTNPNTVIFLIGNKM 130
+ + + L+VY IT R+++ + + + I L+GNK
Sbjct: 62 ENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKS 121
Query: 131 DLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQ 178
DL R+V E + A D F+E SA NV++ F +++
Sbjct: 122 DLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRL 169
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 82.1 bits (201), Expect = 3e-20
Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 9/165 (5%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
+ +I+G G GK+ +L++ + + P G + V + +K Q+WD G
Sbjct: 6 MRILILGLDGAGKTTILYRLQVGEVVTTIPT-----IGFNVETVTYKNLKFQVWDLGGLT 60
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD-TKNLTNPNTVIFLIGNKMDLEG 134
R R YY + V D R S L + ++ + NK D+E
Sbjct: 61 SIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQ 120
Query: 135 SRDVR---YDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
+ ++ + SA G +++A + +
Sbjct: 121 AMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 165
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 76.7 bits (188), Expect = 7e-18
Identities = 25/183 (13%), Positives = 50/183 (27%), Gaps = 20/183 (10%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
Y + +++G GKS ++ Q + T G+ + +K+ ++D
Sbjct: 3 YRATHRLLLLGAGESGKSTIVKQMRILHVVL----TSGIF----ETKFQVDKVNFHMFDV 54
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSW---LTDTKNLTN--------PN 120
GQ R + + V + + + L + NL
Sbjct: 55 GGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRT 114
Query: 121 TVIFLIGNKMDLEGSRDVRYDEA-KKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQN 179
+ L NK DL + + + + E A + I
Sbjct: 115 ISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDE 174
Query: 180 IKD 182
Sbjct: 175 FLR 177
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 75.9 bits (185), Expect = 9e-18
Identities = 30/177 (16%), Positives = 53/177 (29%), Gaps = 21/177 (11%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K + +G GK+ LLH + + P E+ + +D G
Sbjct: 14 GKLVFLGLDNAGKTTLLHMLKDDRLGQHVPT-----LHPTSEELTIAGMTFTTFDLGGHI 68
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD-TKNLTNPNTVIFLIGNKMDLEG 134
+ R V ++Y G + + D L + T N I ++GNK+D
Sbjct: 69 QARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPE 128
Query: 135 SRDVR---------------YDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
+ + K L S + + + F A+ I
Sbjct: 129 AISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 185
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 73.0 bits (178), Expect = 1e-16
Identities = 25/170 (14%), Positives = 44/170 (25%), Gaps = 20/170 (11%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K +++G GKS L Q + + T G+ + + + ++ D GQ
Sbjct: 3 VKILLLGAGESGKSTFLKQM---RIIHGQDPTKGI----HEYDFEIKNVPFKMVDVGGQR 55
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDT-----------KNLTNPNTVIF 124
R + L + + N N I
Sbjct: 56 SERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSII 115
Query: 125 LIGNKMDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAK 174
L NK DL + F E + + + F +
Sbjct: 116 LFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQ--KFLVECFRGKRR 163
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 72.3 bits (176), Expect = 2e-16
Identities = 27/201 (13%), Positives = 50/201 (24%), Gaps = 43/201 (21%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K +++G GKS + Q T G+ + + ++ D GQ
Sbjct: 3 LKLLLLGTGESGKSTFIKQMRIIHG--SGVPTTGIIE----YPFDLQSVIFRMVDVGGQR 56
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNH-----------LSSWLTDTKNLTNPNTVIF 124
R + + + ++ + + T N+ +
Sbjct: 57 SERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVI 116
Query: 125 LIGNKMDLEGSRDVRYDEAKKFAEEND--------------------------LIFVEAS 158
L NK DL + + F E + +
Sbjct: 117 LFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTC 176
Query: 159 AMTGENVEQAFLETAKKIYQN 179
A EN+ F I Q
Sbjct: 177 ATDTENIRFVFAAVKDTILQL 197
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 71.6 bits (174), Expect = 5e-16
Identities = 24/188 (12%), Positives = 52/188 (27%), Gaps = 11/188 (5%)
Query: 19 IIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFR 78
+ +G GK+ L + ++ +I + + I +
Sbjct: 4 LFVGLCDSGKTLLFVRLLTGQYRDTQT-SITDSSAIYKVNNNRGNSLTLIDLPGHESLRF 62
Query: 79 AVTRSYYRGAAGALMVYDI-----TRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLE 133
+ + A + V D + L L D+ L N +++ + NK D+
Sbjct: 63 QLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLL-IACNKQDIA 121
Query: 134 GSR---DVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLNANMT 190
++ ++ K+ S + + A L K L
Sbjct: 122 MAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQL-GKKGKEFEFSQLPLKVEFL 180
Query: 191 ESGVQHKE 198
E +
Sbjct: 181 ECSAKGGR 188
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 63.4 bits (153), Expect = 4e-13
Identities = 28/201 (13%), Positives = 52/201 (25%), Gaps = 46/201 (22%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K +++G GKS ++ Q G+ + + +++D GQ
Sbjct: 3 VKLLLLGAGESGKSTIVKQMKIIHE-----AGTGIV----ETHFTFKDLHFKMFDVGGQR 53
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS-----------WLTDTKNLTNPNTVIF 124
R + G + ++ + + N +T I
Sbjct: 54 SERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSII 113
Query: 125 LIGNKMDLEGSRDVRYDEAKKFAEENDLIFVEA--------------------------S 158
L NK DL + + + E E
Sbjct: 114 LFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTC 173
Query: 159 AMTGENVEQAFLETAKKIYQN 179
A +NV+ F I +N
Sbjct: 174 ATDTKNVQFVFDAVTDVIIKN 194
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 57.7 bits (138), Expect = 5e-11
Identities = 32/174 (18%), Positives = 50/174 (28%), Gaps = 23/174 (13%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 72
SY II G GK+ LL T P T+ + + G + + D
Sbjct: 1 SYQPSIIIAGPQNSGKTSLLTLLTTDSVRP----TVVSQEPLSAADYDGSGV--TLVDFP 54
Query: 73 GQERFRAVTRSYYRGAAGA-----LMVYDITRRSTYNHLSSWLTDTKNLTN----PNTVI 123
G + R Y + A MV + +L D ++T I
Sbjct: 55 GHVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDI 114
Query: 124 FLIGNKMDLEGSRDVRYDEAK--------KFAEENDLIFVEASAMTGENVEQAF 169
+ NK +L +R + + L VE + E
Sbjct: 115 LIACNKSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTL 168
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 51.3 bits (121), Expect = 6e-09
Identities = 27/161 (16%), Positives = 48/161 (29%), Gaps = 1/161 (0%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 75
K +I G GKS LL+ ++ G +H + + L I DTAG
Sbjct: 2 MKVVIAGRPNAGKSSLLNALAGREAA-IVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLR 60
Query: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGS 135
A + + ++ D + + + +
Sbjct: 61 EASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRN 120
Query: 136 RDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
+ E +E N + SA TGE V+ + +
Sbjct: 121 KADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSM 161
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 43.8 bits (102), Expect = 2e-06
Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 19/160 (11%)
Query: 17 KYIIIGDMGVGKSCLLHQFTEQK---------FMPDCPHTIGVEFGTRIIEVHGEKIKLQ 67
+ +I+G VGKS LL++ + D V G V ++ +
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 68 IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIG 127
D + T A L V D + +
Sbjct: 62 TNDLVERLGIER-TLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRYLVVINKVDVV 120
Query: 128 NKMDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQ 167
K++ + K + ++ + SA+ GE +E+
Sbjct: 121 EKIN-------EEEIKNKLGTDRHMVKI--SALKGEGLEK 151
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 44.4 bits (104), Expect = 4e-06
Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 10/138 (7%)
Query: 20 IIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEV--HGEKIKLQIWDTAGQERF 77
+ G+ G GKS ++ + GV T H + WD G
Sbjct: 61 VTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIGST 120
Query: 78 RAVTRSY---YRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEG 134
+Y + + R N + K ++ + + K+D
Sbjct: 121 NFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIA----KAISMMKKEFYFVRTKVD-SD 175
Query: 135 SRDVRYDEAKKFAEENDL 152
+ E + F +E L
Sbjct: 176 ITNEADGEPQTFDKEKVL 193
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 42.3 bits (98), Expect = 1e-05
Identities = 24/156 (15%), Positives = 42/156 (26%), Gaps = 11/156 (7%)
Query: 20 IIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAG------ 73
++G GKS LL T + ++EV E+ + + D G
Sbjct: 6 LVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEE-RFTLADIPGIIEGAS 64
Query: 74 --QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
+ R R ++ + + NK+D
Sbjct: 65 EGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLVALNKVD 124
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQ 167
L V+ L + SA+TG +
Sbjct: 125 LLEEEAVK--ALADALAREGLAVLPVSALTGAGLPA 158
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 39.7 bits (91), Expect = 8e-05
Identities = 25/162 (15%), Positives = 42/162 (25%), Gaps = 7/162 (4%)
Query: 20 IIGDMGVGKSCLLHQFTEQKFM-----PDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQ 74
I+G VGKS LL+ K P T +
Sbjct: 10 IVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDA 69
Query: 75 ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEG 134
Y A +V+ + R + I L+GNK+D
Sbjct: 70 LGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAAK 129
Query: 135 SRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
+ + E + + SA+ V + + +
Sbjct: 130 YPEEAMKAYHELLPEAEPRML--SALDERQVAELKADLLALM 169
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 39.7 bits (91), Expect = 9e-05
Identities = 25/176 (14%), Positives = 50/176 (28%), Gaps = 13/176 (7%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQK-----------FMPDCPHTIGVEFGTRIIEVHGEKI 64
K I+G VGKS L + ++ P ++ G +
Sbjct: 9 IKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRR 68
Query: 65 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIF 124
K ++ ++ A ++V D T+ T + V
Sbjct: 69 KSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVFN 128
Query: 125 LIGNKMDLEGSRDVRYDEAK-KFAEENDLIFVEASAMTGENVEQAFLETAKKIYQN 179
+ E D + K + + SA G N+++ ++ Y +
Sbjct: 129 KWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDR-MIDAMNLAYAS 183
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 38.0 bits (87), Expect = 3e-04
Identities = 27/169 (15%), Positives = 54/169 (31%), Gaps = 15/169 (8%)
Query: 20 IIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAG------ 73
++G VGKS LL + K H + ++E + + D G
Sbjct: 6 LVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGR-SFVMADLPGLIEGAH 64
Query: 74 --QERFRAVTRSYYRGAAGALMVY----DITRRSTYNHLSSWLTDTKNLTNPNTVIFLIG 127
R R ++ + + NL ++
Sbjct: 65 QGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVA 124
Query: 128 NKMDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
NKMD+ + + +K ++ + + SA+T E + + E A ++
Sbjct: 125 NKMDMPEAAENLEAFKEKLTDDYPVFPI--SAVTREGLRELLFEVANQL 171
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 37.8 bits (86), Expect = 4e-04
Identities = 19/162 (11%), Positives = 43/162 (26%), Gaps = 10/162 (6%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQ- 74
+ G GKS L+ T QK + T G + EV K + +
Sbjct: 17 IEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAE 76
Query: 75 ------ERFRAVTRSYYRGAAGALMVYDITRRSTYNH--LSSWLTDTKNLTNPNTVIFLI 126
+++ Y + + + + V+
Sbjct: 77 VPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTK 136
Query: 127 GNKMDLEGSRDVRYDEAKKFAEENDLI-FVEASAMTGENVEQ 167
+K+ + + N + S++ + V++
Sbjct: 137 ADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDK 178
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 37.4 bits (85), Expect = 5e-04
Identities = 21/187 (11%), Positives = 51/187 (27%), Gaps = 9/187 (4%)
Query: 1 MKTMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVH 60
+ + QY + + + G VGKS ++ +K + G ++
Sbjct: 9 VISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIN 68
Query: 61 GEKIKLQIWDTAG------QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTK 114
E + + + Y L + + + +
Sbjct: 69 DELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYE 128
Query: 115 NLTNPNTVIFLIGNKMDLEGSRDVRYDE---AKKFAEENDLIFVEASAMTGENVEQAFLE 171
L + +I K D + + + + S+ T + ++A+
Sbjct: 129 FLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGA 188
Query: 172 TAKKIYQ 178
K I +
Sbjct: 189 IKKMINR 195
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 37.2 bits (85), Expect = 5e-04
Identities = 19/138 (13%), Positives = 42/138 (30%), Gaps = 9/138 (6%)
Query: 36 TEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGA-LMV 94
E P+ T + ++ D G E A GAA +
Sbjct: 58 CESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATM---LSGAALMDGAI 114
Query: 95 YDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEG--SRDVRYDEAKKFAEE--- 149
+ + + + ++ NK+D+ +Y + K+F +
Sbjct: 115 LVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWA 174
Query: 150 NDLIFVEASAMTGENVEQ 167
++ + SA+ N++
Sbjct: 175 ENVPIIPVSALHKINIDS 192
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 37.0 bits (84), Expect = 7e-04
Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 10/169 (5%)
Query: 20 IIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT-----AGQ 74
I+G VGKS LL++ QK I G + + +
Sbjct: 10 IVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKR 69
Query: 75 ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEG 134
R + ++ +V + + + + + K VI + +++
Sbjct: 70 AINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLN-KLREGKAPVILAVNKVDNVQE 128
Query: 135 SRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDG 183
D+ ++ N L V SA TG NV+ A + +++ +
Sbjct: 129 KADLLPHLQFLASQMNFLDIVPISAETGLNVD----TIAAIVRKHLPEA 173
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 36.6 bits (83), Expect = 9e-04
Identities = 32/190 (16%), Positives = 58/190 (30%), Gaps = 36/190 (18%)
Query: 19 IIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFR 78
I G VGKS L+++ T +K G G + E +I D G
Sbjct: 4 IFAGRSNVGKSTLIYRLTGKKV------RRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMM 57
Query: 79 ---------------AVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKN-------L 116
+ A++V D + L
Sbjct: 58 GLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFL 117
Query: 117 TNPNTVIFLIGNKMDLEGSRDVRYDEAKKF----AEENDLIFVEASAMTGENVEQAFLET 172
+ + NK+D + + + E D +F+ SA G+N+E+
Sbjct: 118 RELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLK--- 174
Query: 173 AKKIYQNIKD 182
+I++ I++
Sbjct: 175 -NRIFEVIRE 183
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 35.5 bits (80), Expect = 0.002
Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 18/175 (10%)
Query: 20 IIGDMGVGKSCLLHQFTEQK--------FMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 71
I+G VGKS L ++ ++K + P VE+ + ++
Sbjct: 5 IVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNPQD 64
Query: 72 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
++ + VT + R A L V D R T S L L+ NK +
Sbjct: 65 IISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLA----DFLRKSTVDTILVANKAE 120
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGKLN 186
+ + I V SA N++ + I + +++ L+
Sbjct: 121 NLREFEREVKPELYSLGFGEPIPV--SAEHNINLDTML----ETIIKKLEEKGLD 169
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae
pv. tomato [TaxId: 323]}
Length = 222
Score = 33.3 bits (75), Expect = 0.012
Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 12/135 (8%)
Query: 41 MPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRR 100
G+ K K I DT G E++ + A+++ D
Sbjct: 66 GLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILVDARY- 124
Query: 101 STYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGSRDVRYD---------EAKKFAEEND 151
+ + +L ++ I NKMDL G + ++ +
Sbjct: 125 -GVQTQTRRHSYIASLLGIKHIVVAI-NKMDLNGFDERVFESIKADYLKFAEGIAFKPTT 182
Query: 152 LIFVEASAMTGENVE 166
+ FV SA+ G+NV
Sbjct: 183 MAFVPMSALKGDNVV 197
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 239
Score = 33.5 bits (76), Expect = 0.013
Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 39/133 (29%)
Query: 62 EKIKLQIWDTAGQERFRAVTRSYYRGAA---GALMVYDI--------------TRRSTYN 104
K ++ + D G F ++ G + A+++ TR
Sbjct: 82 PKYQVTVIDAPGHRDF---IKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTREHAL- 137
Query: 105 HLSSWLTDTKNLTNPNTVIFLIGNKMDLEGSRDVRYDEAKKFAEE---------NDLIFV 155
L T + ++ + NKMD + R+ E K + FV
Sbjct: 138 -----LAFTLGV--RQLIVAV--NKMDSVKWDESRFQEIVKETSNFIKKVGYNPKTVPFV 188
Query: 156 EASAMTGENVEQA 168
S G+N+ +A
Sbjct: 189 PISGWNGDNMIEA 201
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 33.0 bits (74), Expect = 0.015
Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 3/130 (2%)
Query: 41 MPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRR 100
P+C ++ D G E + GA++V
Sbjct: 55 CPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEP 114
Query: 101 STYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGSRDVRYDEAKKFAEE---NDLIFVEA 157
L + + N +I ++ + Y + K+F E + +
Sbjct: 115 CPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPI 174
Query: 158 SAMTGENVEQ 167
SA+ G N++
Sbjct: 175 SALHGANIDV 184
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 31.5 bits (71), Expect = 0.056
Identities = 31/195 (15%), Positives = 57/195 (29%), Gaps = 40/195 (20%)
Query: 20 IIGDMGVGKSCLLHQFTEQ-----------KFMPDCPHTIGVEFGTRI----IEVHGEKI 64
IG + GK+ L T + G I +E K
Sbjct: 8 TIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKR 67
Query: 65 KLQIWDTAGQERFRAVTRSYYRGAA---GALMVYDIT---RRSTYNHLSSWLTDTKNLTN 118
D G + ++ GAA GA++V T H+ L +
Sbjct: 68 HYSHVDCPGHADY---IKNMITGAAQMDGAILVVSAADGPMPQTREHIL--LARQVGV-- 120
Query: 119 PNTVIFLIGNKMDLEGSRDVRYDEAKKFAEEN---------DLIFVEASAMTGENVEQAF 169
P V+F+ NK+D+ + D + + ++ + SA+
Sbjct: 121 PYIVVFM--NKVDMVDDPE-LLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRN 177
Query: 170 LETAKKIYQNIKDGK 184
+T + + +
Sbjct: 178 PKTRRGENEWVDKIW 192
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 30.4 bits (67), Expect = 0.12
Identities = 22/148 (14%), Positives = 37/148 (25%), Gaps = 20/148 (13%)
Query: 20 IIGDMGVGKSCLLHQFTEQK----------------FMPDCPHTIGVEFGTRIIEVHGEK 63
++G + GK+ LL +P + +
Sbjct: 10 VLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRETL 69
Query: 64 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVI 123
L DT G E F + + A A+++ DI + L T
Sbjct: 70 PGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEAL----NILRMYRTPF 125
Query: 124 FLIGNKMDLEGSRDVRYDEAKKFAEEND 151
+ NK+D V
Sbjct: 126 VVAANKIDRIHGWRVHEGRPFMETFSKQ 153
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 30.2 bits (67), Expect = 0.18
Identities = 23/168 (13%), Positives = 48/168 (28%), Gaps = 19/168 (11%)
Query: 19 IIIGDMGVGKSCLLHQFTEQKFMP-------DCPHTI--GVEFGTRIIEVHGEKIKLQIW 69
++G GKS +L F + F+P P + +H + K +
Sbjct: 30 AVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLHCKGKKFTDF 89
Query: 70 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTN-PNTVIFLIGN 128
+ E R + + ++ S NLT + +
Sbjct: 90 EEVRLEIEAETDRVTGTNKGISPVPINLRVYS---------PHVLNLTLVDLPGMTKVPV 140
Query: 129 KMDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKI 176
D +F + + + + S + L+ AK++
Sbjct: 141 GDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEV 188
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal
(G) domain {Archaeon Sulfolobus solfataricus [TaxId:
2287]}
Length = 224
Score = 29.0 bits (64), Expect = 0.33
Identities = 23/159 (14%), Positives = 39/159 (24%), Gaps = 31/159 (19%)
Query: 33 HQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGAL 92
+F GV + +K I D G F + A A+
Sbjct: 50 EKFAFLLDRLKEERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAI 109
Query: 93 MVYDI--------------TRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMDLEGSRDV 138
+V TR K + ++ + + +
Sbjct: 110 LVVSAKKGEYEAGMSVEGQTREHIILA--------KTMGLDQLIVAVNKMDLTEPPYDEK 161
Query: 139 RYDEAKKF---------AEENDLIFVEASAMTGENVEQA 168
RY E N + FV A +G+N+
Sbjct: 162 RYKEIVDQVSKFMRSYGFNTNKVRFVPVVAPSGDNITHK 200
>d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase
{Thermotoga maritima [TaxId: 2336]}
Length = 128
Score = 27.5 bits (60), Expect = 0.71
Identities = 6/52 (11%), Positives = 16/52 (30%), Gaps = 7/52 (13%)
Query: 42 PDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALM 93
P+C + +G+E ++I + D + + +
Sbjct: 1 PNCAYVLGIEVT-------RDEIAACLIDASMNILAHEAHPLPSQSDREETL 45
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 27.9 bits (61), Expect = 0.88
Identities = 19/184 (10%), Positives = 42/184 (22%), Gaps = 14/184 (7%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQK--------FMPDCPHTIGVEFGTRIIEVHGEKIKLQ 67
+++G GVGKS ++ ++ P + + + + L
Sbjct: 33 LTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNII-DTPGLI 91
Query: 68 IWDTAGQERFRAVTRSYY-RGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTV--IF 124
+ + L V + N +
Sbjct: 92 EGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAI 151
Query: 125 LIGNKMDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIKDGK 184
+ + YDE E L V + + + + +N
Sbjct: 152 VALTHAQFSPPDGLPYDEFFSKRSEALLQVV--RSGASLKKDAQASDIPVVLIENSGRCN 209
Query: 185 LNAN 188
N +
Sbjct: 210 KNDS 213
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 27.9 bits (61), Expect = 0.92
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Query: 19 IIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEV 59
+++G GKS +L + F+P G TR +
Sbjct: 28 VVVGSQSSGKSSVLENIVGRDFLP-----RGSGIVTRRPLI 63
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 27.3 bits (60), Expect = 1.3
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 6/60 (10%)
Query: 20 IIGDMGVGKSCLLHQFTEQKF-MPD----CPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQ 74
I+G GKS L+++ +K HT G+ L + DT G
Sbjct: 37 IVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHTKGIWMWCVPHPK-KPGHILVLLDTEGL 95
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 26.8 bits (58), Expect = 1.9
Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 18 YIIIGDMGVGKSCLLHQFTE--QKFMPDCPHTIGVEFGTRIIE 58
+ G G GK+ L+ +F E E +++
Sbjct: 29 ILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLR 71
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 26.2 bits (56), Expect = 2.5
Identities = 17/155 (10%), Positives = 38/155 (24%), Gaps = 7/155 (4%)
Query: 20 IIGDMGVGKSCLLHQFTEQK---FMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQER 76
I G + GK+ L TE P + I + +I
Sbjct: 10 IFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRITLVDAPGH 69
Query: 77 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTN----PNTVIFLIGNKMDL 132
+ L + + + + + N ++
Sbjct: 70 ADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIPIIVVITKSDNAGTEEI 129
Query: 133 EGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQ 167
+ + + + + + SA TG V++
Sbjct: 130 KRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDE 164
>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation
specificity factor subunit 3 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 451
Score = 26.7 bits (57), Expect = 2.7
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 17 KYIIIGDMG-VGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEV 59
+G VG+SC++ +F +K M DC G+ G ++
Sbjct: 5 LIRPLGAGQEVGRSCIILEFKGRKIMLDC----GIHPGLEGMDA 44
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 26.0 bits (56), Expect = 3.2
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 146 FAEENDLIFVEASAMTGENVEQ 167
+ + D+ ++ SA TG+NV+
Sbjct: 201 YNSKTDVKYMPVSAYTGQNVKD 222
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 26.2 bits (56), Expect = 3.3
Identities = 4/21 (19%), Positives = 10/21 (47%)
Query: 19 IIIGDMGVGKSCLLHQFTEQK 39
+++G GKS ++ +
Sbjct: 33 LVLGLRRTGKSSIIKIGINEL 53
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 25.9 bits (55), Expect = 3.4
Identities = 7/52 (13%), Positives = 14/52 (26%)
Query: 18 YIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 69
+ G+ GK+ + H +P + E +L
Sbjct: 26 TEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAV 77
>d1kp6a_ d.58.25.1 (A:) Killer toxin KP6 alpha-subunit {Smut fungus
(Ustilago maydis) [TaxId: 5270]}
Length = 79
Score = 24.7 bits (53), Expect = 4.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 80 VTRSYYRGAAGALMVYDITRRSTYNHLSS 108
+++SYY AG + D R Y+H SS
Sbjct: 39 LSKSYYDARAGHCLFSDDLRNQFYSHCSS 67
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1
ATP synthase {Spinach (Spinacia oleracea), chloroplast
[TaxId: 3562]}
Length = 276
Score = 25.7 bits (56), Expect = 4.5
Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 17 KYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEV 59
+ +IIGD GK+ + + + V G + V
Sbjct: 69 RELIIGDRQTGKTAVATDTILNQQG-QNVICVYVAIGQKASSV 110
>d1acca_ f.11.1.1 (A:) Anthrax protective antigen {Anthrax bacillus
(Bacillus anthracis) [TaxId: 1392]}
Length = 722
Score = 26.0 bits (57), Expect = 4.7
Identities = 15/76 (19%), Positives = 20/76 (26%), Gaps = 8/76 (10%)
Query: 150 NDLIFVEASAMTGENVEQAFLE-----TAKKIYQNIKDGKLNANMT---ESGVQHKERGG 201
E + Q A IY + KLNA M H +R
Sbjct: 530 QGKDITEFDFNFDQQTSQNIKNQLAELNATNIYTVLDKIKLNAKMNILIRDKRFHYDRNN 589
Query: 202 PASLGDSSSSDKPNCS 217
A D S + +
Sbjct: 590 IAVGADESVVKEAHRE 605
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 25.5 bits (54), Expect = 4.8
Identities = 15/172 (8%), Positives = 42/172 (24%), Gaps = 17/172 (9%)
Query: 19 IIIGDMGVGKSCL---------LHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 69
++G MG GKS + + + + + E + ++
Sbjct: 6 FLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVI 65
Query: 70 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNK 129
+ +++ + + R ++ L
Sbjct: 66 NELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHVET 125
Query: 130 MDLEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQAFLETAKKIYQNIK 181
E + +E EE + + + + A +I ++
Sbjct: 126 PPREV-LEALANERNPLYEEIADVTIRTDDQSAK-------VVANQIIHMLE 169
>d1ppjj_ f.23.14.1 (J:) Subunit X (non-heme 7 kDa protein) of
cytochrome bc1 complex (Ubiquinol-cytochrome c
reductase) {Cow (Bos taurus) [TaxId: 9913]}
Length = 33
Score = 23.2 bits (50), Expect = 5.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 166 EQAFLETAKKIYQNIKDGKL 185
E+AF + A IY++I +GKL
Sbjct: 3 ERAFDQGADAIYEHINEGKL 22
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate
synthase, DHBP synthase, RibB {Archaeon
Methanocaldococcus jannaschii [TaxId: 2190]}
Length = 219
Score = 25.3 bits (55), Expect = 5.0
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 118 NPNTVIFLIGNKMDLEGSRDVRYDEAKKFAEENDLIFVE 156
P T I + M +G+ + +E K++AE+++LI++
Sbjct: 177 VPITTICEM---MGDDGNA-MSKNETKRYAEKHNLIYLS 211
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 25.3 bits (54), Expect = 5.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 17 KYIIIGDMGVGKSCLLHQ 34
K II G+ GVGK+ L+ +
Sbjct: 2 KIIITGEPGVGKTTLVKK 19
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 25.4 bits (54), Expect = 5.1
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 18 YIIIGDMGVGKSCLLHQF 35
++ G G GK+ QF
Sbjct: 29 TLVSGTSGTGKTLFSIQF 46
>d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate
synthase, DHBP synthase, RibB {Candida albicans [TaxId:
5476]}
Length = 202
Score = 25.3 bits (55), Expect = 5.4
Identities = 7/39 (17%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 118 NPNTVIFLIGNKMDLEGSRDVRYDEAKKFAEENDLIFVE 156
P VI + + E +R D+ +F +++ + +
Sbjct: 157 QPAGVICEL---VRDEDGLMMRLDDCIQFGKKHGIKIIN 192
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho,
ATPase domain {Escherichia coli [TaxId: 562]}
Length = 289
Score = 25.4 bits (55), Expect = 5.9
Identities = 11/88 (12%), Positives = 25/88 (28%), Gaps = 3/88 (3%)
Query: 20 IIGDMGVGKSCLLHQFT--EQKFMPDC-PHTIGVEFGTRIIEVHGEKIKLQIWDTAGQER 76
I+ GK+ LL PDC + ++ + +K ++ + E
Sbjct: 48 IVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEP 107
Query: 77 FRAVTRSYYRGAAGALMVYDITRRSTYN 104
+ A + + +
Sbjct: 108 ASRHVQVAEMVIEKAKRLVEHKKDVIIL 135
>d1vyda_ a.3.1.1 (A:) Cytochrome c2 {Rhodobacter capsulatus [TaxId:
1061]}
Length = 116
Score = 24.4 bits (52), Expect = 7.1
Identities = 9/94 (9%), Positives = 22/94 (23%), Gaps = 5/94 (5%)
Query: 46 HTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNH 105
H+I E+ Y+ + AL T
Sbjct: 17 HSII---APDGTEIVKGAKTGPNLYGVVGRTAGTYPEFKYKDSIVALGASGFA--WTEED 71
Query: 106 LSSWLTDTKNLTNPNTVIFLIGNKMDLEGSRDVR 139
+++++ D +M + ++
Sbjct: 72 IATYVKDPGAFLKEKLDDKKAKTEMAFKLAKGGE 105
>d1in0a2 d.58.49.1 (A:90-163) Hypothetical protein HI1034
{Haemophilus influenzae [TaxId: 727]}
Length = 74
Score = 23.4 bits (51), Expect = 7.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 171 ETAKKIYQNIKDGKL 185
E AKKI + +KD K+
Sbjct: 16 EMAKKITKLVKDSKI 30
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 25.2 bits (53), Expect = 7.9
Identities = 12/132 (9%), Positives = 28/132 (21%), Gaps = 10/132 (7%)
Query: 19 IIIGDMGVGKSCLLHQFTEQ----------KFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 68
++G G GK+ L + E G ++ + +
Sbjct: 47 TLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGL 106
Query: 69 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGN 128
R L + + L + ++G+
Sbjct: 107 SRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGH 166
Query: 129 KMDLEGSRDVRY 140
+ + D
Sbjct: 167 NDAVLNNLDPST 178
>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein
TTHA0252 {Thermus thermophilus [TaxId: 274]}
Length = 431
Score = 25.0 bits (53), Expect = 8.9
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 5/38 (13%)
Query: 17 KYIIIGDMG-VGKSCLLHQFTEQKFMPDCPHTIGVEFG 53
+ + G V S L ++ + DC G+ G
Sbjct: 2 RIVPFGAAREVTGSAHLLLAGGRRVLLDC----GMFQG 35
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 251
Score = 24.7 bits (52), Expect = 9.0
Identities = 7/32 (21%), Positives = 10/32 (31%)
Query: 18 YIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIG 49
+ G+ GKS L H +P
Sbjct: 37 TELFGEFRTGKSQLCHTLAVTCQIPLDIGGGE 68
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 24.6 bits (52), Expect = 9.0
Identities = 21/157 (13%), Positives = 38/157 (24%), Gaps = 6/157 (3%)
Query: 18 YIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERF 77
Y+++G G GKS + + Q GE + Q
Sbjct: 9 YVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALN 68
Query: 78 RAVTR------SYYRGAAGALMVYDITRRSTYNHLSSWLTDTKNLTNPNTVIFLIGNKMD 131
A + Y R +LS + + G+
Sbjct: 69 DAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFK 128
Query: 132 LEGSRDVRYDEAKKFAEENDLIFVEASAMTGENVEQA 168
+ + A+E D++ V+ V
Sbjct: 129 TQMLVTQFETLQEPGADETDVLVVDIDQPLEGVVAST 165
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.132 0.386
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 779,609
Number of extensions: 34462
Number of successful extensions: 329
Number of sequences better than 10.0: 1
Number of HSP's gapped: 271
Number of HSP's successfully gapped: 118
Length of query: 218
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 136
Effective length of database: 1,281,736
Effective search space: 174316096
Effective search space used: 174316096
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.1 bits)