Query psy11692
Match_columns 171
No_of_seqs 126 out of 1094
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 16:27:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11692.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11692hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aq5_A Acetylcholine receptor 100.0 4.3E-40 1.5E-44 277.7 6.3 167 1-170 168-337 (461)
2 4aq5_C Acetylcholine receptor 100.0 4E-39 1.4E-43 275.4 6.0 169 1-170 167-348 (522)
3 4aq5_E Acetylcholine receptor 100.0 3.3E-39 1.1E-43 274.0 4.2 169 1-170 143-321 (488)
4 4aq5_B Acetylcholine receptor 100.0 6.6E-39 2.2E-43 272.5 5.7 168 1-170 168-343 (493)
5 3tlw_A GLR4197 protein, GLIC; 100.0 1E-37 3.5E-42 252.6 6.9 164 1-170 132-300 (321)
6 3rqw_A ELIC pentameric ligand 100.0 6.3E-38 2.2E-42 253.9 5.1 166 1-171 128-302 (322)
7 2bg9_C Acetylcholine receptor 100.0 1.7E-37 5.7E-42 255.7 6.0 158 1-164 146-306 (369)
8 2bg9_B Acetylcholine receptor 100.0 1.2E-37 4.3E-42 256.5 5.2 160 1-164 144-304 (370)
9 3rhw_A Avermectin-sensitive gl 100.0 3.2E-37 1.1E-41 252.1 7.4 166 1-170 146-316 (347)
10 2bg9_E Acetylcholine receptor 100.0 1E-37 3.5E-42 257.0 3.3 161 1-163 143-307 (370)
11 2bg9_A Acetylcholine receptor 100.0 7.8E-37 2.7E-41 251.8 6.2 159 1-162 144-305 (370)
12 2ksr_A Neuronal acetylcholine 100.0 2.1E-32 7.1E-37 201.1 3.4 120 48-168 9-128 (164)
13 2lly_A Neuronal acetylcholine 100.0 5.8E-30 2E-34 183.3 3.7 108 62-170 2-110 (137)
14 2lkg_A Acetylcholine receptor; 100.0 1E-31 3.5E-36 192.7 -7.8 105 54-159 36-140 (140)
15 1oed_A Acetylcholine receptor 99.9 1.1E-27 3.6E-32 184.8 -1.1 103 67-170 1-103 (227)
16 1oed_B Acetylcholine receptor 99.9 2E-27 7E-32 185.5 -1.7 103 67-170 1-103 (250)
17 1oed_C Acetylcholine receptor 99.9 3.5E-27 1.2E-31 185.2 -0.8 103 67-170 1-103 (260)
18 1oed_E Acetylcholine receptor 99.9 4.2E-27 1.4E-31 184.7 -0.7 103 67-170 1-104 (260)
19 2wn9_A Soluble acetylcholine r 99.6 2.8E-15 9.6E-20 115.6 7.8 74 1-76 151-226 (228)
20 1uw6_A Acetylcholine-binding p 99.5 2.2E-14 7.5E-19 109.4 8.0 70 1-72 139-211 (211)
21 4afh_A ACHBP; acetylcholine-bi 99.5 3.1E-14 1.1E-18 109.9 6.7 72 1-74 148-221 (230)
22 1vry_A Glycine receptor alpha- 99.5 5.9E-15 2E-19 94.1 1.5 63 96-161 2-64 (76)
23 4aoe_A Acetylcholine-binding p 99.4 1.8E-13 6.2E-18 103.9 6.5 62 1-65 141-204 (205)
24 4aod_A Acetylcholine-binding p 99.4 1.2E-13 4.1E-18 104.9 5.3 62 1-65 141-204 (205)
25 3igq_A GLR4197 protein; plgic 99.4 3.4E-13 1.2E-17 102.1 6.8 69 1-71 128-198 (201)
26 2qc1_B Acetylcholine receptor 99.3 2.9E-12 9.8E-17 97.6 8.6 65 1-67 145-212 (212)
27 2bj0_A Acetylcholine-binding p 99.3 2.7E-12 9.3E-17 97.2 7.8 65 1-66 137-203 (203)
28 3sq6_A ACHBP, neuronal acetylc 99.3 5.2E-12 1.8E-16 95.7 7.1 63 1-67 140-204 (204)
29 1mot_A Glycine receptor alpha- 95.0 0.00052 1.8E-08 34.9 -3.4 27 96-122 2-28 (28)
30 1fjk_A Cardiac phospholamban; 22.2 1.1E+02 0.0037 16.8 3.1 20 129-148 28-47 (52)
31 2kv5_A FST, putative uncharact 21.7 39 0.0013 17.3 1.2 23 73-95 7-29 (33)
No 1
>4aq5_A Acetylcholine receptor subunit alpha; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_A
Probab=100.00 E-value=4.3e-40 Score=277.70 Aligned_cols=167 Identities=39% Similarity=0.704 Sum_probs=146.3
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE--ecCCCC-CeeEEEEEEEEEeecceeEEEEehh
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV--YDEHQP-TETDITFYIIIRRKTLFYTVNLILP 77 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~--~~~~~~-~y~~i~~~~~l~R~~~~y~~~~~iP 77 (171)
|+||||+|+++++++.+.+ +.++.++|..+|||++.+....++. +.+|++ +|++++|++++|||++||++++++|
T Consensus 168 l~f~S~~y~~~~v~l~~~~--~~~~l~~~~~~~eW~l~~~~~~~~~~~y~~~~~~~y~~l~~~~~l~R~~~~Y~i~l~iP 245 (461)
T 4aq5_A 168 MKLGIWTYDGTKVSISPES--DRPDLSTFMESGEWVMKDYRGWKHWVYYTCCPDTPYLDITYHFIMQRIPLYFVVNVIIP 245 (461)
T ss_dssp EEEEESSCCTTTEEEECCC--CCCSGGGCCTTCSSEEEEEEEEEEECCCSSSSSCCCEEEEEEEEEECCCTHHHHHHHHH
T ss_pred eEEeccccCCceEEEEecc--ccccHHhhhccCceEEeeeeeEEEEEeecCcCCCCcceEEEEEEEEecccceeeehhhh
Confidence 5899999999999999754 3577888999999999998876654 556777 9999999999999999999999999
Q ss_pred hHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy11692 78 TVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSACLHYFLLYELL 157 (171)
Q Consensus 78 ~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~~~~~~~~~~~ 157 (171)
|+++++++|++||+|++++||+++|+|++|++++++..+++.+|++|..+|+||+|+.+||+++++|++ ..++++|+|+
T Consensus 246 ~~liv~ls~lsF~Lp~~s~eRv~LgiT~LLt~tvfl~~v~~~LP~tS~~vplI~~y~~~~m~~v~~sll-~tv~Vl~l~~ 324 (461)
T 4aq5_A 246 CLLFSFLTVLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMIFVISSII-VTVVVINTHH 324 (461)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCGGGHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHheEeccccccceeehhHHHHHHHHHHHHHHHhhcCcccCCcCHHHHHHHHHHHHHHHHHH-HHhhheeeec
Confidence 999999999999999999999999999999999999999999999996699999999999999999975 4556788899
Q ss_pred ccCCCCCCCcccc
Q psy11692 158 ATGNTFDMNTYQK 170 (171)
Q Consensus 158 ~~~~~~~~p~w~~ 170 (171)
|++...+||+|+|
T Consensus 325 r~~~~~~mp~w~r 337 (461)
T 4aq5_A 325 RSPSTHTMPQWVR 337 (461)
T ss_dssp CCTTTC-------
T ss_pred cCCCCCCCCHHHH
Confidence 9999999999987
No 2
>4aq5_C Acetylcholine receptor delta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_C
Probab=100.00 E-value=4e-39 Score=275.40 Aligned_cols=169 Identities=42% Similarity=0.683 Sum_probs=142.8
Q ss_pred CeEecceecCCeEEEEEcCCCc----------ccccccccccccEEEeEeeeEEEE--ecC-CCCCeeEEEEEEEEEeec
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKN----------FVDLSDYWKSGTWDIIEVPAYLNV--YDE-HQPTETDITFYIIIRRKT 67 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~----------~~~~~~~~~~~eW~l~~~~~~~~~--~~~-~~~~y~~i~~~~~l~R~~ 67 (171)
|+||||+|+++++++.|..++. .++.++|..+|||++.+....++. +.+ +++.|++++|++++||++
T Consensus 167 L~f~S~~Y~~~~v~l~~~~~~~~~~~~~~~~~~~d~~~f~~~gEW~l~~~~~~~~~~~~~~~~~~~y~~l~~~~~lrR~~ 246 (522)
T 4aq5_C 167 LKFTALNYNANEISMDLMTDTIDGKDYPIEWIIIDPEAFTENGEWEIIHKPAKKNIYGDKFPNGTNYQDVTFYLIIRRKP 246 (522)
T ss_dssp EEEEETTCCTTTCCEEC---------------CCSTTSCCTTCSEEEEECCEEEEECCCSSCSSCCCEEEEEEEEEEECC
T ss_pred EEEecccccCceeEEEeccCcccccCccceeeeccHHHceecceEEEeeeEEEEEeeeccccCCCCcceEEEEEEEeccc
Confidence 5899999999999999865420 246678899999999998876654 233 345799999999999999
Q ss_pred ceeEEEEehhhHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHH
Q psy11692 68 LFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSAC 147 (171)
Q Consensus 68 ~~y~~~~~iP~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~ 147 (171)
+||++++++||+++++++|++||+|+++|||+++|+|++|++++|+..+++.+|++|+.+|+||+|+.+||+++++|++
T Consensus 247 ~~Yii~l~iP~~liv~Ls~lsF~Lp~d~~eRisLgIT~LLt~tvfl~~v~~~LP~tS~~vPlI~~y~~~~m~lv~lSll- 325 (522)
T 4aq5_C 247 LFYVINFITPCVLISFLAALAFYLPAESGEKMSTAICVLLAQAVFLLLTSQRLPETALAVPLIGKYLMFIMSLVTGVVV- 325 (522)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTTHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHH-
T ss_pred ceeeeehhhHHHHHHHHHHheeecCCCcCceEEehHHHHHHHHHHHHHHHhcCCcccCCccHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999999998899999999999999999976
Q ss_pred HHHhhhhhhhccCCCCCCCcccc
Q psy11692 148 LHYFLLYELLATGNTFDMNTYQK 170 (171)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~p~w~~ 170 (171)
..++++|+|+|+++..+||+|+|
T Consensus 326 ~tviVlnl~~r~~~~~~mp~wvr 348 (522)
T 4aq5_C 326 NCGIVLNFHFRTPSTHVLSTRVK 348 (522)
T ss_dssp HHHHHHHHHSCCSSCC-------
T ss_pred HHheEEEEEccCCCCCCCChHHH
Confidence 45668888999999999999987
No 3
>4aq5_E Acetylcholine receptor gamma subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_E
Probab=100.00 E-value=3.3e-39 Score=274.04 Aligned_cols=169 Identities=40% Similarity=0.645 Sum_probs=145.2
Q ss_pred CeEecceecCCeEEEEEcCCCc------ccccccccccccEEEeEeeeEEEE--ecC-CCCCeeEEEEEEEEEeecceeE
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKN------FVDLSDYWKSGTWDIIEVPAYLNV--YDE-HQPTETDITFYIIIRRKTLFYT 71 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~------~~~~~~~~~~~eW~l~~~~~~~~~--~~~-~~~~y~~i~~~~~l~R~~~~y~ 71 (171)
|+||||+|+++++++.|..++. .++.+++..+|||++.+....++. +.+ +++.|++++|++++||+++||+
T Consensus 143 l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~d~~~~~~~~eW~l~~~~~~~~~~~~~~~~~~~y~~l~~~~~lrR~~~~Y~ 222 (488)
T 4aq5_E 143 LVFRSQTYNAHEVNLQLSAEEGEVVEWIHIDPEDFTENGEWTIRHRPAKKNYNWQLTKDDIDFQEIIFFLIIQRKPLFYI 222 (488)
T ss_dssp EEEEESSSCSSSCCEECCCSCC-------CGGGSCCTTCSEEEEECCCEEECCCCTTCCCSCCCEEEECCEEEECCCSSH
T ss_pred EEeeeeccccceEEEEeccCCCcceeeeeccHHHccccceEEEEeeEEEEEEeeeccCCCCCcceEEEEEEEccchhhee
Confidence 5899999999999999975431 246678899999999998776553 233 3457999999999999999999
Q ss_pred EEEehhhHHHHHHHHHhhcccCC-CCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHHHHH
Q psy11692 72 VNLILPTVLISFLCVLVFYLPAE-AGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSACLHY 150 (171)
Q Consensus 72 ~~~~iP~~li~~l~~~~F~lp~~-~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~~~~ 150 (171)
+++++||+++++++|++||+|++ +|||+++|+|++|++++|+..+++.+|++|+.+|+||+|+.+||+++++|++ ..+
T Consensus 223 i~l~iP~~liv~Ls~lsF~Lp~~a~~eRvsLgIt~LLt~tvfl~~v~~~LP~tS~~vPlI~~y~~~~m~lv~~Sll-~tv 301 (488)
T 4aq5_E 223 INIIAPCVLISSLVVLVYFLPAQAGGQKCTLSISVLLAQTIFLFLIAQKVPETSLNVPLIGKYLIFVMFVSLVIVT-NCV 301 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-HHH
T ss_pred hhHhHHHHHHHHHHHHHhcCCccccCceEEEehHHHHHHHHHHHHHHhhCCccccCccHHHHHHHHHHHHHHHHHH-HHh
Confidence 99999999999999999999999 6999999999999999999999999999998899999999999999999975 455
Q ss_pred hhhhhhhccCCCCCCCcccc
Q psy11692 151 FLLYELLATGNTFDMNTYQK 170 (171)
Q Consensus 151 ~~~~~~~~~~~~~~~p~w~~ 170 (171)
+++|+|+|++...+||+|+|
T Consensus 302 ~Vlnl~~r~~~~~~mp~w~r 321 (488)
T 4aq5_E 302 IVLNVSLRTPNTHSLSEKIK 321 (488)
T ss_dssp HHHHHTTCSTTTCC------
T ss_pred hEEEEEccCCCCCcCChhHh
Confidence 68888999999999999987
No 4
>4aq5_B Acetylcholine receptor beta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_B
Probab=100.00 E-value=6.6e-39 Score=272.52 Aligned_cols=168 Identities=40% Similarity=0.685 Sum_probs=143.7
Q ss_pred CeEecceecCCeEEEEEcCCC--------cccccccccccccEEEeEeeeEEEEecCCCCCeeEEEEEEEEEeecceeEE
Q psy11692 1 MKFGSWTFNGDQVSLALYNDK--------NFVDLSDYWKSGTWDIIEVPAYLNVYDEHQPTETDITFYIIIRRKTLFYTV 72 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~--------~~~~~~~~~~~~eW~l~~~~~~~~~~~~~~~~y~~i~~~~~l~R~~~~y~~ 72 (171)
|+||||+|+++++++.|..++ ..+++++|..+|||++.+....++.... +++|+++++++++||+++||++
T Consensus 168 l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~l~~f~~~~eW~l~~~~~~~~~~~~-~~~y~~l~~~~~lrR~~~~Y~i 246 (493)
T 4aq5_B 168 MVFKSYTYDTSEVILQHALDAKGEREVKEIMINQDAFTENGQWSIEHKPSRKNWRSD-DPSYEDVTFYLIIQRKPLFYIV 246 (493)
T ss_dssp EEEECSSCCBTSCEEECCCCC---------CCSGGGCCTTCSSBCCCCCCEECCCTT-SSSBCCEEEECCCBCCCCSSTT
T ss_pred EEEeeecCccccEEEEeccCCCCccceecccccHHHhccccceeeeeeeEEEEeecC-CCCccEEEEEEEEEeccceeee
Confidence 589999999999999995432 2366778999999999998776554221 2289999999999999999999
Q ss_pred EEehhhHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHHHHHhh
Q psy11692 73 NLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSACLHYFL 152 (171)
Q Consensus 73 ~~~iP~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~~~~~~ 152 (171)
++++||+++++++|++||+|+++|||+++|+|++|++++++..+++.+|++|+.+|+||+|+.+||+++++|++ ..+++
T Consensus 247 ~l~iP~~liv~Ls~lsF~Lp~~s~eRvsLgiT~LLt~tvfl~~v~~~LP~tS~~vPlI~~y~~~~m~~v~lsll-~tv~V 325 (493)
T 4aq5_B 247 YTIVPCILISILAILVFYLPPDAGEKMSLSISALLALTVFLLLLADKVPETSLSVPIIISYLMFIMILVAFSVI-LSVVV 325 (493)
T ss_dssp TTHHHHHHHHHHHHHHHHSTTTCGGGGTHHHHHHHHHHHHHHHHHHHTTTTTTSSCCCCHHHHHHHHHHHHHHH-HHHHH
T ss_pred hhhhhHHHHHHHHHhEEecCCCCCceEEehHHHHHHHHHHHHHHHhcCCccccCCCchHhHHHHHHHHHHHHHH-HHHhh
Confidence 99999999999999999999999999999999999999999999999999998899999999999999999975 45568
Q ss_pred hhhhhccCCCCCCCcccc
Q psy11692 153 LYELLATGNTFDMNTYQK 170 (171)
Q Consensus 153 ~~~~~~~~~~~~~p~w~~ 170 (171)
+|+|+|++...+||+|+|
T Consensus 326 l~l~~r~~~~~~mp~w~r 343 (493)
T 4aq5_B 326 LNLHHRSPNTHTMPNWIR 343 (493)
T ss_dssp HHHHHTCTTTC-------
T ss_pred eeeeccCCCCCcCCHHHH
Confidence 888999999999999987
No 5
>3tlw_A GLR4197 protein, GLIC; Cys-loop receptor family, membrane protein, transport protei; HET: LMT; 2.60A {Gloeobacter violaceus} PDB: 3uu4_A* 3uub_A* 3tlv_A* 3uu6_A* 3uu5_A* 3uu3_A* 3tlu_A* 3uu8_A* 3tls_A* 3tlt_A* 3p4w_A* 3p50_A* 3eam_A* 4f8h_A* 2xq4_A 2xq5_A 2xq6_A 2xq3_A 2xq8_A 2xqa_A ...
Probab=100.00 E-value=1e-37 Score=252.58 Aligned_cols=164 Identities=19% Similarity=0.294 Sum_probs=144.1
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE--ecCCCCCeeEEEEEEEEEeecceeEEEEehhh
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV--YDEHQPTETDITFYIIIRRKTLFYTVNLILPT 78 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~--~~~~~~~y~~i~~~~~l~R~~~~y~~~~~iP~ 78 (171)
|+||||+|+++|+++.|.++ .++.+++..++||++.+....++. +.+++++|+++++++++|||++||++++++||
T Consensus 132 l~f~S~~y~~~~v~l~~~~~--~~~~~~~~~~~ew~l~~~~~~~~~~~~~~~~~~y~~l~~~~~l~R~~~~y~~~~~iP~ 209 (321)
T 3tlw_A 132 IYLIVRSVDTRNIVLAVDLE--KVGKNDDVFLTGWDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 209 (321)
T ss_dssp EEEEEECCSSCCEEEEECGG--GCEECTTCCBTTEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCTTHHHHTHHHH
T ss_pred EEEecccCChhhEEEEEcCC--cccccccccccceEEEeeEeEEeeEEecCCCCceeEEEEEEEEEEeeceeehhHHHHH
Confidence 58999999999999999743 355667889999999999876543 56788999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHHHHHhhhh-hhh
Q psy11692 79 VLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSACLHYFLLY-ELL 157 (171)
Q Consensus 79 ~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~~~~~~~~-~~~ 157 (171)
+++++++|++|| |+++|||+++|+|++|++++++..+++.+|++|+ +|+||+|+.+||+++++|++ |.++++ .++
T Consensus 210 ~li~~ls~~sF~-p~~~~~Rv~l~it~lL~~t~~~~~~~~~lP~~s~-vp~i~~~~~~~~~~v~~sll--~~v~v~~l~~ 285 (321)
T 3tlw_A 210 LFILFISWTAFW-STSYEANVTLVVSTLIAHIAFNILVETCLPKTPY-MTYTGAIIFMIYLFYFVAVI--EVTVQHYLKV 285 (321)
T ss_dssp HHHHHHHGGGGG-CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSS-CCHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHhheeec-cCCCCCcEEEEhhHHHHHHHHHHHHHhhCCCccc-cHHHHHHHHHHHHHHHHHHH--HHHhhhhhhc
Confidence 999999999999 8888999999999999999999999999999998 99999999999999999965 444444 455
Q ss_pred ccCCCC--CCCcccc
Q psy11692 158 ATGNTF--DMNTYQK 170 (171)
Q Consensus 158 ~~~~~~--~~p~w~~ 170 (171)
++.+.+ ++|+|.|
T Consensus 286 ~~~~~~a~~~p~w~r 300 (321)
T 3tlw_A 286 ESQPARAASITRASR 300 (321)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred CCccccccccChhhe
Confidence 555443 8999976
No 6
>3rqw_A ELIC pentameric ligand gated ION channel from ERW chrysanthemi; membrane, transport protein; HET: ACH MES; 2.91A {Dickeya dadantii} PDB: 2yn6_A* 3rqu_A* 3uq4_A 3uq5_A 3uq7_A 2vl0_A 2yks_A 4a97_A* 4a96_A* 2yoe_A* 4a98_A*
Probab=100.00 E-value=6.3e-38 Score=253.89 Aligned_cols=166 Identities=16% Similarity=0.172 Sum_probs=143.3
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEE-eEeeeE------EEE--ecCCCCCeeEEEEEEEEEeecceeE
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDI-IEVPAY------LNV--YDEHQPTETDITFYIIIRRKTLFYT 71 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l-~~~~~~------~~~--~~~~~~~y~~i~~~~~l~R~~~~y~ 71 (171)
|+||||+|+++|+++.|.++....+.++ +++||++ .+.... ++. +.||+++|+++++++++|||++||+
T Consensus 128 l~f~S~~y~~~~v~l~~~~~~~~~~~~~--~~~ew~l~~~~~~~~~~~~y~~~~~~~~~~~~y~~l~~~~~l~R~~~~y~ 205 (322)
T 3rqw_A 128 LELEPFSYNNQQLRFSDIQVYTENIDNE--EIDEWWIRGKASTHISDIRYDHLSSVQPNQNEFSRITVRIDAVRNPSYYL 205 (322)
T ss_dssp EEEEESSCSSEEEEEEEEECCSCSSSSC--SSSSEEECCSCEECCEEEECTTSCCSSSSCCEEEEEEEEEEEEECCHHHH
T ss_pred EEEEEcccCcceEEEEECCCcccccCCC--CCCceEEEeeeEEEeeccccceeeeccCCCCCeEEEEEEEEEEEeeeeee
Confidence 5899999999999999965432233333 7899999 888765 222 3467889999999999999999999
Q ss_pred EEEehhhHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHHHHHh
Q psy11692 72 VNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSACLHYF 151 (171)
Q Consensus 72 ~~~~iP~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~~~~~ 151 (171)
+++++||+++++++|++||+| +++||+++|+|++|++++++..+++.+|++|+ +|+||+|+.+|++++++|+++ ..+
T Consensus 206 ~~~~iP~~li~~ls~~sF~lp-~~~~Rv~l~it~lL~~~~~~~~~~~~lP~~s~-vp~i~~~~~~~~~~v~~sll~-~~~ 282 (322)
T 3rqw_A 206 WSFILPLGLIIAASWSVFWLE-SFSERLQTSFTLMLTVVAYAFYTSNILPRLPY-TTVIDQMIIAGYGSIFAAILL-IIF 282 (322)
T ss_dssp HHTHHHHHHHHHHHHGGGGCS-SHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSS-CCHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred ehHHHHHHHHHHHHHHHhccC-CCCCcEEEEEehHHHHHHHHHHHhhhCCCccc-hHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 999999999999999999999 77999999999999999999999999999998 999999999999999999653 333
Q ss_pred hhhhhhccCCCCCCCccccC
Q psy11692 152 LLYELLATGNTFDMNTYQKN 171 (171)
Q Consensus 152 ~~~~~~~~~~~~~~p~w~~~ 171 (171)
+.+.++|+++..+||+|+|.
T Consensus 283 v~~l~~~~~~~~~~p~w~r~ 302 (322)
T 3rqw_A 283 AHHRQANGVEDDLLIQRCRL 302 (322)
T ss_dssp HHHSSSSSSCCCHHHHTCTT
T ss_pred HHHHHccCccccCcchHHHH
Confidence 45557788888999999973
No 7
>2bg9_C Acetylcholine receptor protein, delta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=1.7e-37 Score=255.71 Aligned_cols=158 Identities=43% Similarity=0.718 Sum_probs=143.2
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE---ecCCCCCeeEEEEEEEEEeecceeEEEEehh
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV---YDEHQPTETDITFYIIIRRKTLFYTVNLILP 77 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~---~~~~~~~y~~i~~~~~l~R~~~~y~~~~~iP 77 (171)
|+||||+|+++++++.| .++.+++..++||++.+....++. +.||+++|+++++++++||+++||++++++|
T Consensus 146 l~f~S~~y~~~~i~l~~-----~~~~~~~~~~~ew~l~~~~~~~~~~~~y~~~~~~y~~l~~~~~l~R~~~~y~~~~~iP 220 (369)
T 2bg9_C 146 LKFTALNYNANEISMDL-----IIDPEAFTENGEWEIIHKPAKKNIYGDKFPNGTNYQDVTFYLIIRRKPLFYVINFITP 220 (369)
T ss_dssp EEEEESSCCTTTCEEEC-----CCGGGSCCTTSSEEEEECCEEEEECCCSSCSSCCCEEEEEEEEEEECCSSHHHHHHHH
T ss_pred EEEEEecccCceEEEEE-----ecccccceeCCEEEEeeeeEEEEEEecCCCCCCCccEEEEEEEEEEccceeEEEEcch
Confidence 58999999999999998 246778889999999999877665 5678899999999999999999999999999
Q ss_pred hHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy11692 78 TVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSACLHYFLLYELL 157 (171)
Q Consensus 78 ~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~~~~~~~~~~~ 157 (171)
|+++++++|++||+|+++|||+++|+|++|++++++..+++.+|++|+.+|+||+|+.+||+++++|++ ..++++|+++
T Consensus 221 ~~liv~ls~~sF~lp~~~~~Rv~lgit~lLt~t~~~~~~~~~lP~~S~~vp~i~~~~~~~~~~v~~sll-~~v~v~~~~~ 299 (369)
T 2bg9_C 221 CVLISFLAALAFYLPAESGEKMSTAICVLLAQAVFLLLTSQRLPETALAVPLIGKYLMFIMSLVTGVVV-NCGIVLNFHF 299 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHhheEEecCCCCCeEEEEhHHHHHHHHHHHHHHHhCCCCccCccHHHHHHHHHHHHHHHHHH-HHhheeeeec
Confidence 999999999999999999999999999999999999999999999998899999999999999999965 3456778888
Q ss_pred ccCCCCC
Q psy11692 158 ATGNTFD 164 (171)
Q Consensus 158 ~~~~~~~ 164 (171)
|+++.++
T Consensus 300 r~~~~~~ 306 (369)
T 2bg9_C 300 RTPSTHS 306 (369)
T ss_dssp CSTTTCC
T ss_pred cCCCCCc
Confidence 8866543
No 8
>2bg9_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=1.2e-37 Score=256.54 Aligned_cols=160 Identities=40% Similarity=0.718 Sum_probs=145.6
Q ss_pred CeEecceecCCeEEEEE-cCCCcccccccccccccEEEeEeeeEEEEecCCCCCeeEEEEEEEEEeecceeEEEEehhhH
Q psy11692 1 MKFGSWTFNGDQVSLAL-YNDKNFVDLSDYWKSGTWDIIEVPAYLNVYDEHQPTETDITFYIIIRRKTLFYTVNLILPTV 79 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~-~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~~~~~~y~~i~~~~~l~R~~~~y~~~~~iP~~ 79 (171)
|+||||+|+++++++.| .+ +.++.+++..++||++.+....++ +.+|+++|+++++++++||+++||++++++||+
T Consensus 144 l~f~S~~y~~~~i~l~~~~~--~~~~~~~~~~~~eW~l~~~~~~~~-y~~~~~~y~~l~~~~~l~R~~~~y~~~~~iP~~ 220 (370)
T 2bg9_B 144 MVFKSYTYDTSEVILQHALD--AMINQDAFTENGQWSIEHKPSRKN-WRSDDPSYEDVTFYLIIQRKPLFYIVYTIVPCI 220 (370)
T ss_dssp EEEEESSCCBTSCEEECSCC--CCCSTTSCCTTCSSEECCCCEEEC-CCTTSSSBCCEEEECCEECCCCSSHHHHHHHHH
T ss_pred EEEEeccccccEEEEEeccC--CccccccccccceEEEeccceEEe-ecCCCCCccEEEEEEEEEEcccceeeeecchHH
Confidence 58999999999999998 43 346788899999999999887766 778899999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q psy11692 80 LISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSACLHYFLLYELLAT 159 (171)
Q Consensus 80 li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~~~~~~~~~~~~~ 159 (171)
++++++|++||+|++++||+++|+|++|++++++..+++.+|++|+.+|+||+|+.+||+++++|+++ .++++|+++|+
T Consensus 221 liv~ls~~sFwlp~~~~~Rv~lgit~lLt~t~~~~~~~~~lP~~S~~vp~i~~~~~~~~~~v~~sll~-~v~v~~~~~r~ 299 (370)
T 2bg9_B 221 LISILAILVFYLPPDAGEKMSLSISALLALTVFLLLLADKVPETSLSVPIIISYLMFIMILVAFSVIL-SVVVLNLHHRS 299 (370)
T ss_dssp HHHHHHHHHHHSTTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHHHHHHH-HHHHHHHHHTC
T ss_pred HHHHHHhheEEccCCCCceEEEEehHHHHHHHHHHHHHhhCCCccccccHHHHHHHHHHHHHHHHHHH-HHHhhhhhccC
Confidence 99999999999999999999999999999999999999999999988999999999999999999653 45677888888
Q ss_pred CCCCC
Q psy11692 160 GNTFD 164 (171)
Q Consensus 160 ~~~~~ 164 (171)
++.++
T Consensus 300 ~~~~~ 304 (370)
T 2bg9_B 300 PNTHE 304 (370)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 66543
No 9
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=100.00 E-value=3.2e-37 Score=252.10 Aligned_cols=166 Identities=15% Similarity=0.264 Sum_probs=145.0
Q ss_pred CeEecceecCCeEEEEEcCCCccccccc--ccccccEEEeEeeeEEEEecCCCCCeeEEEEEEEEEeecceeEEEEehhh
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSD--YWKSGTWDIIEVPAYLNVYDEHQPTETDITFYIIIRRKTLFYTVNLILPT 78 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~--~~~~~eW~l~~~~~~~~~~~~~~~~y~~i~~~~~l~R~~~~y~~~~~iP~ 78 (171)
|+||||+|+++++++.|.+++ .++.++ ...++||++.+...........++.|+++++.+++||+++||++++++||
T Consensus 146 l~f~S~~y~~~~v~l~~~~~~-~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~y~~l~~~~~l~R~~~~y~~~l~iP~ 224 (347)
T 3rhw_A 146 IDLASYAYTTKDIEYLWKEHS-PLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPS 224 (347)
T ss_dssp EEEEESSCCTTTEEEEECSSC-SEEECTTSGGGCCSEEEEEEEEEECCEECSSCEECEEEEEEEEEECSHHHHHHTHHHH
T ss_pred EEeccCcCChhhEEEEecCCC-ceeecCcceeEccceEEeeEEeeEeeeeecccceeEEEEEEEEEEEeeEEEEEeehhH
Confidence 589999999999999997542 333333 56789999999876554444557899999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCC-CceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy11692 79 VLISFLCVLVFYLPAEA-GEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSACLHYFLLYELL 157 (171)
Q Consensus 79 ~li~~l~~~~F~lp~~~-~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~~~~~~~~~~~ 157 (171)
+++++++|++||+|+++ |||+++|+|++|++++++..+++.+|++|+ +|+||+|+.+||+++++|++ |++++++..
T Consensus 225 ~li~~ls~~sF~lp~~~~~~Rv~lgit~lLt~tv~~~~~~~~lP~~S~-v~~id~~~~~~~~~v~~sll--e~~~v~~l~ 301 (347)
T 3rhw_A 225 CMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSY-IKAIDVWIGACMTFIFCALL--EFALVNHIA 301 (347)
T ss_dssp HHHHHHHHTTTTSCTTCHHHHHHHHHHHHHHHHHHHHHHHHTSCCCSS-CCHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred HHHHHHhheEEeccCCCCcceEEEEeehHHHHHHHHHHHHhhCCCccc-eeHHHHHHHHHHHHHHHHHH--HHHHHHHHh
Confidence 99999999999999999 899999999999999999999999999998 99999999999999999954 777888866
Q ss_pred ccCCC--CCCCcccc
Q psy11692 158 ATGNT--FDMNTYQK 170 (171)
Q Consensus 158 ~~~~~--~~~p~w~~ 170 (171)
+++++ .++|+|++
T Consensus 302 ~~~~~~~~~~~~~~~ 316 (347)
T 3rhw_A 302 NAGTTEWNDISKRVD 316 (347)
T ss_dssp HSSSHHHHHHHHHHH
T ss_pred ccCcchhhhhhHHHH
Confidence 66554 58999976
No 10
>2bg9_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=1e-37 Score=257.03 Aligned_cols=161 Identities=41% Similarity=0.676 Sum_probs=144.5
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE---ecCCCCCeeEEEEEEEEEeecceeEEEEehh
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV---YDEHQPTETDITFYIIIRRKTLFYTVNLILP 77 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~---~~~~~~~y~~i~~~~~l~R~~~~y~~~~~iP 77 (171)
|+||||+|+++++++.|.+++ .++.+++..++||++.+....++. +.+|+++|+++++.+++||+++||++++++|
T Consensus 143 l~f~S~~y~~~~i~l~~~~~~-~~~~~~~~~~~eW~l~~~~~~~~~~~~y~~~~~~y~~l~~~~~l~R~~~~y~~~~~iP 221 (370)
T 2bg9_E 143 LVFRSQTYNAHEVNLQLSAEE-GIDPEDFTENGEWTIRHRPAKKNYNWQLTKDDIDFQEIIFFLIIQRKPLFYIINIIAP 221 (370)
T ss_dssp EEEEESSSCTTSCCEECCCSC-CCGGGSCCTTSSEEEEECCCCEECCCCTTCCCSCCCEEEECCEEEECCCSSHHHHHHH
T ss_pred EEEEeeccccceeEEEecCCC-cccHhhcccccEEEEecceeEEEEEecccCCCCCCcEEEEEEEEEEccCceeEEEehh
Confidence 589999999999999997542 567888999999999998876654 5678899999999999999999999999999
Q ss_pred hHHHHHHHHHhhcccCC-CCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHHHHHhhhhhh
Q psy11692 78 TVLISFLCVLVFYLPAE-AGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSACLHYFLLYEL 156 (171)
Q Consensus 78 ~~li~~l~~~~F~lp~~-~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~~~~~~~~~~ 156 (171)
|+++++++|++||+|++ +|||+++|+|++|++++++..+++.+|++|+.+|+||+|+.+||+++++|+++ .++++|++
T Consensus 222 ~~liv~ls~~sFwlp~~a~~~Rv~lgit~lLt~t~~~~~~~~~lP~~S~~vp~i~~~~~~~~~~v~~sll~-~v~v~~~~ 300 (370)
T 2bg9_E 222 CVLISSLVVLVYFLPAQAGGQKCTLSISVLLAQTIFLFLIAQKVPETSLNVPLIGKYLIFVMFVSLVIVTN-CVIVLNVS 300 (370)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHH-HHHHHHHT
T ss_pred HHHHHHHHHHeEEeccccCcceeEEeeeHHHHHHHHHHHHHHhCCCccCCCChHHHHHHHHHHHHHHHHHH-Hhhheeee
Confidence 99999999999999999 59999999999999999999999999999988999999999999999999653 44567888
Q ss_pred hccCCCC
Q psy11692 157 LATGNTF 163 (171)
Q Consensus 157 ~~~~~~~ 163 (171)
+|+++..
T Consensus 301 ~r~~~~~ 307 (370)
T 2bg9_E 301 LRTPNTH 307 (370)
T ss_dssp TCSTTTC
T ss_pred ccCCCCC
Confidence 8876544
No 11
>2bg9_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=7.8e-37 Score=251.77 Aligned_cols=159 Identities=41% Similarity=0.724 Sum_probs=142.1
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE--ecCCC-CCeeEEEEEEEEEeecceeEEEEehh
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV--YDEHQ-PTETDITFYIIIRRKTLFYTVNLILP 77 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~--~~~~~-~~y~~i~~~~~l~R~~~~y~~~~~iP 77 (171)
|+||||+|+++++++.|.++ .++++++..++||++.+....++. +.||+ ++|+++++++++||+++||++++++|
T Consensus 144 l~f~S~~y~~~~v~l~~~~~--~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~~~~y~~l~~~~~l~R~~~~y~~~~~iP 221 (370)
T 2bg9_A 144 MKLGIWTYDGTKVSISPESD--RPDLSTFMESGEWVMKDYRGWKHWVYYTCCPDTPYLDITYHFIMQRIPLYFVVNVIIP 221 (370)
T ss_dssp EEEEESSCCTTTEEEECCCC--CCSTTSCCTTCSSEEEEEEEEEEECCCSSSSSCCCEEEEEEEEEECCCTHHHHHHHHH
T ss_pred EEEEEecccCcEEEEEecCC--CcccccccccceEEEEcceEEEEEEecCCCCCCCeeEEEEEEEEEEccchhhhhhhhH
Confidence 58999999999999998653 467788999999999998876654 55665 68999999999999999999999999
Q ss_pred hHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy11692 78 TVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSACLHYFLLYELL 157 (171)
Q Consensus 78 ~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~~~~~~~~~~~ 157 (171)
|+++++++|++||+|+++|||+++|+|++|++++++..+++.+|++|+.+|+||+|+.+||+++++|+++ .++++|+++
T Consensus 222 ~~liv~ls~~sF~lp~~~~~Rv~lgit~lLt~t~~~~~~~~~lP~~S~~vp~i~~~~~~~~~~v~~sl~~-~~~v~~~~~ 300 (370)
T 2bg9_A 222 CLLFSFLTVLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMIFVISSIIV-TVVVINTHH 300 (370)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCGGGHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHheecCCCCCCeEEEeHHHHHHHHHHHHHHHhhCCCCcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHhhhc
Confidence 9999999999999999999999999999999999999999999999977999999999999999999653 334567788
Q ss_pred ccCCC
Q psy11692 158 ATGNT 162 (171)
Q Consensus 158 ~~~~~ 162 (171)
|+++.
T Consensus 301 r~~~~ 305 (370)
T 2bg9_A 301 RSPST 305 (370)
T ss_dssp CSTTT
T ss_pred cCccc
Confidence 77654
No 12
>2ksr_A Neuronal acetylcholine receptor subunit beta-2; nicotinic acetylcholine receptors, transmembrane domain, HFI junction, cell membrane; NMR {Homo sapiens} PDB: 2lm2_A
Probab=99.97 E-value=2.1e-32 Score=201.13 Aligned_cols=120 Identities=46% Similarity=0.707 Sum_probs=94.3
Q ss_pred cCCCCCeeEEEEEEEEEeecceeEEEEehhhHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCc
Q psy11692 48 DEHQPTETDITFYIIIRRKTLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVL 127 (171)
Q Consensus 48 ~~~~~~y~~i~~~~~l~R~~~~y~~~~~iP~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~ 127 (171)
.+|+++|++++|++++|||++||.+++++||+++++++|++||+|+|+|||+++|++++|++++++..+++++|++|+.+
T Consensus 9 ~~~~~~y~~i~~~~~lrR~~~~Y~~~liiP~~li~~Ls~~~F~Lp~dsgeRvslgit~LLs~tvfl~~v~~~lP~tS~~v 88 (164)
T 2ksr_A 9 TSVDLGTENLYFQSNARRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDV 88 (164)
T ss_dssp ----------------CCCTHHHHHHTHHHHHHHHHHHHHHHTSCCCSHHHHHHHHHHHHHHHHHHHHHHTTCCSSCTTH
T ss_pred CCCCCCcceEEEEEEEEEeehheeeeehhhHHHHHHHHhheeEcCCCCCCeEEEeeehHHHHHHHHHHHHHHCCCCcccC
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999679
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCcc
Q psy11692 128 PLIAKYLLFTFIMNTVKSACLHYFLLYELLATGNTFDMNTY 168 (171)
Q Consensus 128 p~i~~y~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~p~w 168 (171)
|+||+|+..||+++++|+++ ..+++|+++|+++..+++.|
T Consensus 89 PlI~~y~~~~m~~v~~sll~-tv~Vl~~~~r~~~~~~p~~~ 128 (164)
T 2ksr_A 89 PLVGKYLMFTMVLVTFSIVT-SVCVLNVHHRSPTTHTPRGG 128 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-HHHHHHHHTSSCCCCSSCCS
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHhhhhhccCCCCCCCCch
Confidence 99999999999999999653 44466788888776665433
No 13
>2lly_A Neuronal acetylcholine receptor subunit alpha-4; transmembrane domain, transport PROT; NMR {Homo sapiens}
Probab=99.96 E-value=5.8e-30 Score=183.30 Aligned_cols=108 Identities=49% Similarity=0.711 Sum_probs=98.1
Q ss_pred EEEeecceeEEEEehhhHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHH
Q psy11692 62 IIRRKTLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMN 141 (171)
Q Consensus 62 ~l~R~~~~y~~~~~iP~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v 141 (171)
++|||++||.+++++||+++++++|++||+|+|+|||+++|++++|++++++..+++++|++|+.+|++|+|+..|++++
T Consensus 2 ~lrR~~~~y~~~~iiP~~li~~Ls~~~F~lp~~s~eRv~lgit~lLs~tv~l~~~~~~lP~tS~~vpli~~y~~~~~~~v 81 (137)
T 2lly_A 2 NAEELPLFYTINLIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSSVSPSIGEYLLFTMIFV 81 (137)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHHHHHHHCSCCSSSCCSTHHHHHHHHHHH
T ss_pred ceEeeehhhhHHHHHHHHHHHHHHHHheeeCCCCCCeEEEEeeeHHHHHHHHHHHHHhCCCCcccchHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999977999999999999999
Q ss_pred HHHHHHHHHhhhhhhhccCCCCCC-Ccccc
Q psy11692 142 TVKSACLHYFLLYELLATGNTFDM-NTYQK 170 (171)
Q Consensus 142 ~~s~~~~~~~~~~~~~~~~~~~~~-p~w~~ 170 (171)
++|+++ ..+++|+++|+++.++| |.|+|
T Consensus 82 ~~sl~~-tv~V~~~~~r~~~~~~mp~~~~d 110 (137)
T 2lly_A 82 TLSIVI-TVFVLNVHHRSPETHTGGGGGID 110 (137)
T ss_dssp HHHHHH-HHHHHHCCSSCSSCCSSCSSSHH
T ss_pred HHHhhh-hhhhhhHHhcCCccCccchHHHH
Confidence 999653 44467888999888888 47776
No 14
>2lkg_A Acetylcholine receptor; transmembrane domain, SIGN protein; NMR {Torpedo marmorata} PDB: 2lkh_A
Probab=99.95 E-value=1e-31 Score=192.71 Aligned_cols=105 Identities=31% Similarity=0.368 Sum_probs=97.6
Q ss_pred eeEEEEEEEEEeecceeEEEEehhhHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhH
Q psy11692 54 ETDITFYIIIRRKTLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKY 133 (171)
Q Consensus 54 y~~i~~~~~l~R~~~~y~~~~~iP~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y 133 (171)
|+++++.+.+|||++||.+++++||+++++++|++||+|+|+|||+++|++++|++++++..+++.+|++|+.+|+||+|
T Consensus 36 y~~l~~~f~lrR~~~~y~~~liiP~~li~~Ls~~~F~Lp~dsgeRvslgit~lLs~tvfl~~v~~~lP~tS~~vPlI~~y 115 (140)
T 2lkg_A 36 LIELSQEGGGGGGPLYFVVNVIEPCKKFSELTGLVFYLPTDSGEKMTESKSVLKSLTEKLKKIVELIPSTSSAVPLIGKY 115 (140)
T ss_dssp HHHHHHTSCSSSCTHHHHHHHHHHHHHHHTHHHHSSSSCCSSSHHHHHHHHHHHHHHHHHHGGGGTCTTTGGGHHHHHHH
T ss_pred EEEEEEEEEEEEcceeeeehhhhHHHHHHHHHhheeEcCCCCCCEEEEeeehHHHHHHHHHHHHHhCCCccccccHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999679999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcc
Q psy11692 134 LLFTFIMNTVKSACLHYFLLYELLAT 159 (171)
Q Consensus 134 ~~~~~~~v~~s~~~~~~~~~~~~~~~ 159 (171)
+..||+++++|+++ ..+++|+++|+
T Consensus 116 ~~~~~~~v~~sll~-tv~Vln~~~r~ 140 (140)
T 2lkg_A 116 MLFTKEFVESSIKI-TEEVINTHHRS 140 (140)
T ss_dssp HHHHHHHTTHHHHH-HHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH-HHhheeeeccC
Confidence 99999999999653 44577877763
No 15
>1oed_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 1dxz_A 3mra_A 2k59_B
Probab=99.93 E-value=1.1e-27 Score=184.76 Aligned_cols=103 Identities=43% Similarity=0.760 Sum_probs=86.1
Q ss_pred cceeEEEEehhhHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHH
Q psy11692 67 TLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSA 146 (171)
Q Consensus 67 ~~~y~~~~~iP~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~ 146 (171)
|.||++++++||+++++++|++||+|+|+|||+++|++++|++++|+..+++.+|++|..+|+||+|+.+||+++++|++
T Consensus 1 pl~Y~~nliiP~~li~~Ls~~~F~Lp~~sgerv~l~it~lLs~tvfl~~v~~~lP~tS~~vPli~~y~~~~m~~v~~sl~ 80 (227)
T 1oed_A 1 PLYFVVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMIFVISSII 80 (227)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTHHHHHHHHHHHHHHH
T ss_pred CeEEEehHHHHHHHHHHHHHHHheeCCCCCCeEeehHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999996699999999999999999975
Q ss_pred HHHHhhhhhhhccCCCCCCCcccc
Q psy11692 147 CLHYFLLYELLATGNTFDMNTYQK 170 (171)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~p~w~~ 170 (171)
..++++|+++|++...+||+|+|
T Consensus 81 -~tv~vln~~~r~~~~~~mp~wvr 103 (227)
T 1oed_A 81 -ITVVVINTHHRSPSTHTMPQWVR 103 (227)
T ss_dssp -HHHHHHHHHHHC-----------
T ss_pred -HHHHHHhhhccCCCCCCcchHHH
Confidence 35557789999999999999997
No 16
>1oed_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 2k58_B
Probab=99.92 E-value=2e-27 Score=185.54 Aligned_cols=103 Identities=44% Similarity=0.746 Sum_probs=86.3
Q ss_pred cceeEEEEehhhHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHH
Q psy11692 67 TLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSA 146 (171)
Q Consensus 67 ~~~y~~~~~iP~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~ 146 (171)
+.||++++++||+++++++|++||+|+++|||+++|++++|++++|+..+++.+|++|..+|+||+|+.+||+++++|++
T Consensus 1 pl~Y~~nliiP~~li~~ls~~~F~Lp~dsgerv~l~it~lLs~tvfl~~v~~~lP~tS~~vPli~~y~~~~m~~v~~sl~ 80 (250)
T 1oed_B 1 PLFYIVYTIIPCILISILAILVFYLPPDAGEKMSLSISALLAVTVFLLLLADKVPETSLSVPIIIRYLMFIMILVAFSVI 80 (250)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCTTHHHHHHHHHHHHH
T ss_pred CeEEEEhHHHHHHHHHHHHHHHheeCCCCCCeEEehhhHHHHHHHHHHHHHHHCCCCcccCCcHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999996699999999999999999965
Q ss_pred HHHHhhhhhhhccCCCCCCCcccc
Q psy11692 147 CLHYFLLYELLATGNTFDMNTYQK 170 (171)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~p~w~~ 170 (171)
..++++|+++|++...+||+|+|
T Consensus 81 -~tv~Vln~~~r~~~~~~mp~wvr 103 (250)
T 1oed_B 81 -LSVVVLNLHHRSPNTHTMPNWIR 103 (250)
T ss_dssp -HHHHHHHHHHTC-----------
T ss_pred -HHhheeeeeccCCCCCCcchHHH
Confidence 45567789999999999999987
No 17
>1oed_C Acetylcholine receptor protein, delta chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 1a11_A 1cek_A 1eq8_A
Probab=99.92 E-value=3.5e-27 Score=185.18 Aligned_cols=103 Identities=48% Similarity=0.689 Sum_probs=86.8
Q ss_pred cceeEEEEehhhHHHHHHHHHhhcccCCCCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHH
Q psy11692 67 TLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSA 146 (171)
Q Consensus 67 ~~~y~~~~~iP~~li~~l~~~~F~lp~~~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~ 146 (171)
+.||++++++||+++++++|++||+|+++|||+++|++++|++++|+..+++.+|++|..+|+||+|+.+||+++++|++
T Consensus 1 pl~Y~~nliiP~~li~~ls~~~F~Lp~~~gekv~l~it~lLs~tvfl~~~~~~lP~tS~~vPli~~y~~~~m~~v~~s~~ 80 (260)
T 1oed_C 1 PLFYVINFITPCVLISFLASLAFYLPAESGEKMSTAISVLLAQAVFLLLTSQRLPETALAVPLIGKYLMFIMSLVTGVIV 80 (260)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTHHHHHHHHHHHHHHH
T ss_pred CeEEEEhHHHHHHHHHHHHHHHeeeCCCCCCeEeehHHHHHHHHHHHHHHHHHCCCCcccchhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999997799999999999999999975
Q ss_pred HHHHhhhhhhhccCCCCCCCcccc
Q psy11692 147 CLHYFLLYELLATGNTFDMNTYQK 170 (171)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~p~w~~ 170 (171)
..++++|+++|++...+||+|+|
T Consensus 81 -~tv~vl~~~~r~~~~~~mp~w~r 103 (260)
T 1oed_C 81 -NCGIVLNFHFRTPSTHVLSTRVK 103 (260)
T ss_dssp -HHHHHHHHHHHC-----------
T ss_pred -HHHheeeeeccCCCCCCccHHHH
Confidence 45667899999999999999997
No 18
>1oed_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1
Probab=99.92 E-value=4.2e-27 Score=184.73 Aligned_cols=103 Identities=44% Similarity=0.709 Sum_probs=86.7
Q ss_pred cceeEEEEehhhHHHHHHHHHhhcccCC-CCceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHH
Q psy11692 67 TLFYTVNLILPTVLISFLCVLVFYLPAE-AGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKS 145 (171)
Q Consensus 67 ~~~y~~~~~iP~~li~~l~~~~F~lp~~-~~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~ 145 (171)
+.||++++++||+++++++|++||+|++ +|||+++|+|++|++++|+..+++.+|++|..+|+||+|+.+||+++++|+
T Consensus 1 pl~Y~~nliiP~~li~~ls~~~F~Lp~~~~gerv~l~it~lLs~tvfl~~~~~~lP~tS~~vPli~~y~~~~m~~v~~sl 80 (260)
T 1oed_E 1 PLFYIINIIAPCVLISSLVVLVYFLPAQAGGQKCTLSISVLLAQTIFLFLIAQKVPETSLNVPLIGKYLIFVMFVSMLIV 80 (260)
T ss_dssp CCSHHHHHHTHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSHHHHHHHHHHHHH
T ss_pred CeEEEEhHHHHHHHHHHHHHHHeeeCCCCCCCeEEeehhHHHHHHHHHHHHHHhCCCCcccchhHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999 799999999999999999999999999999669999999999999999996
Q ss_pred HHHHHhhhhhhhccCCCCCCCcccc
Q psy11692 146 ACLHYFLLYELLATGNTFDMNTYQK 170 (171)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~p~w~~ 170 (171)
+ .+++++|+++|++...+||+|+|
T Consensus 81 ~-~tv~vln~~~r~~~~~~mp~w~r 104 (260)
T 1oed_E 81 M-NCVIVLNVSLRTPNTHSLSEKIK 104 (260)
T ss_dssp H-HHHHHHHHHHHC-----------
T ss_pred H-HHhheeeeeccCCCCCCcchHHH
Confidence 5 56678899999999999999997
No 19
>2wn9_A Soluble acetylcholine receptor; 4-0H-DMXBA, acetylcholine binding protein; HET: ZY5 NAG BMA MAN; 1.75A {Aplysia californica} PDB: 2wnj_A* 2wzy_A* 2x00_A* 3peo_A* 2pgz_A* 2ph9_A* 4dbm_A* 3c84_A* 2byq_A* 2byr_A* 2bys_A* 2wnc_A* 2wnl_A* 3c79_A* 2byn_A* 3pmz_A* 2x00_D* 2xnv_A* 2xnt_A* 2xnu_A* ...
Probab=99.58 E-value=2.8e-15 Score=115.64 Aligned_cols=74 Identities=27% Similarity=0.447 Sum_probs=57.8
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE--ecCCCCCeeEEEEEEEEEeecceeEEEEeh
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV--YDEHQPTETDITFYIIIRRKTLFYTVNLIL 76 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~--~~~~~~~y~~i~~~~~l~R~~~~y~~~~~i 76 (171)
|+||||+|+++++++.|..+ .++++++..++||++.+....++. +.||+++|++++|+|++|||++||++++++
T Consensus 151 l~f~Sw~y~~~~i~l~~~~~--~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~~~y~~l~~~~~l~R~~~fYii~lil 226 (228)
T 2wn9_A 151 VKFGSWVYSGFEIDLKTDTD--QVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERRAGNGFFRNL 226 (228)
T ss_dssp EEEEESSCCTTTEEEECSCS--BCBCTTCCTTCSEEEEEEEEEEEEECCSSCSSCEEEEEEEEEEEECC---------
T ss_pred EEEEeecccccEEEEEecCC--ccchhhceecCCEEEEEEEEEEEEEeecCCCCCeeEEEEEEEEEEeccceEEEEEE
Confidence 68999999999999998753 467788999999999999887664 567889999999999999999999999875
No 20
>1uw6_A Acetylcholine-binding protein; pentamer, IGG fold, nicotine, glycoprotein; HET: NCT; 2.2A {Lymnaea stagnalis} SCOP: b.96.1.1 PDB: 1i9b_A* 1ux2_A* 3u8l_A* 1yi5_A 1uv6_A* 3u8k_A* 3u8j_B* 3u8m_A* 3u8n_A* 2zju_A* 2zjv_A*
Probab=99.52 E-value=2.2e-14 Score=109.35 Aligned_cols=70 Identities=23% Similarity=0.386 Sum_probs=59.5
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccc-cccEEEeEeeeEEEE--ecCCCCCeeEEEEEEEEEeecceeEE
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWK-SGTWDIIEVPAYLNV--YDEHQPTETDITFYIIIRRKTLFYTV 72 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~-~~eW~l~~~~~~~~~--~~~~~~~y~~i~~~~~l~R~~~~y~~ 72 (171)
|+||||+|+++++++.|.++ .++.+++.. ++||++.+....++. +.||+++|++++|+|++|||++||++
T Consensus 139 l~f~S~~y~~~~i~l~~~~~--~~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~~~y~~l~~~~~l~R~~~yyil 211 (211)
T 1uw6_A 139 IKIGSWTHHSREISVDPTTE--NSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSEIL 211 (211)
T ss_dssp EEEEESSCCTTTEEEEECCC--SSCTTTTSCTTSSEEEEEEEEEEEEEECTTCSSEEEEEEEEEEEEECCCC---
T ss_pred EEEEcccccCceEEEEeccc--ccchhhhcccCCCEEEEeeEEEEEEEEeCCCCCCcceEEEEEEEEEccceeEC
Confidence 68999999999999999754 467788899 999999999877654 66789999999999999999999974
No 21
>4afh_A ACHBP; acetylcholine-binding protein, nicotinic receptor, ION chann; HET: NAG BMA MAN L0B; 1.88A {Capitella teleta} PDB: 4afg_A* 4b5d_A*
Probab=99.49 E-value=3.1e-14 Score=109.94 Aligned_cols=72 Identities=24% Similarity=0.456 Sum_probs=56.8
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE--ecCCCCCeeEEEEEEEEEeecceeEEEE
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV--YDEHQPTETDITFYIIIRRKTLFYTVNL 74 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~--~~~~~~~y~~i~~~~~l~R~~~~y~~~~ 74 (171)
|+||||+|+++++++.|..++.++++ +|.++| |++.+....++. +.||+++|++++|++++|||++||+.+-
T Consensus 148 l~f~S~~y~~~~v~l~~~~~~~~~d~-~~~~n~-W~l~~~~~~~~~~~y~cc~~~y~~i~f~~~irRrpl~~~~~~ 221 (230)
T 4afh_A 148 FQFGSWVYSVDEVDIHFMDDKAEVLL-DFYQDS-LEILENSAQRQEVVYPCCESAYVEMKYLLALRSENGNSTYSR 221 (230)
T ss_dssp EEEEESSCCTTTEEEEEGGGCCSCBC-TTCCCC-CCEEEEEEEEEEECCTTCSSCEEEEEEEEEEECC--------
T ss_pred EeeccccccCceEEEEECCCCcccce-eeecCc-EEEEEEEEEEEEEecCCCCCCccEEEEEEEEEEeechhhccc
Confidence 68999999999999999865455778 899999 999999987764 5688899999999999999999998764
No 22
>1vry_A Glycine receptor alpha-1 chain; second transmembrane domain, third transmembrane domain, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=99.48 E-value=5.9e-15 Score=94.13 Aligned_cols=63 Identities=21% Similarity=0.211 Sum_probs=56.1
Q ss_pred CceEEehhHHHHHHHHHHHHhhhcCCCCccCcCchhhHHHHHHHHHHHHHHHHHHhhhhhhhccCC
Q psy11692 96 GEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVKSACLHYFLLYELLATGN 161 (171)
Q Consensus 96 ~~r~~l~~t~lL~~~~~l~~v~~~lP~~s~~~p~i~~y~~~~~~~v~~s~~~~~~~~~~~~~~~~~ 161 (171)
++|+++|++++|+++.+...++.++|+.|| ++.||+|+..|++++++|+ +|++++|+..|+++
T Consensus 2 paRv~LGittvLtmtt~~~~~~~~lPkVSY-ikAiDvw~~~C~~FVF~aL--lEya~V~y~~r~~~ 64 (76)
T 1vry_A 2 PARVGLGITTVLTLTTQSSGSRASLPKVSY-VKAIDIWLAVCLLFVFSAL--LEYAAVNFVSRKKK 64 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTTCCCSHHH-HHHHHHTHHHHHHHHHHHH--HHHHHHHHHCC---
T ss_pred CceEEechHHHHHHHHHhcCcccCCCCccc-hHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhcc
Confidence 579999999999999999999999999998 9999999999999999994 59999998776643
No 23
>4aoe_A Acetylcholine-binding protein type 2; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholin receptor; 5.80A {Biomphalaria glabrata}
Probab=99.43 E-value=1.8e-13 Score=103.90 Aligned_cols=62 Identities=26% Similarity=0.479 Sum_probs=55.3
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE--ecCCCCCeeEEEEEEEEEe
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV--YDEHQPTETDITFYIIIRR 65 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~--~~~~~~~y~~i~~~~~l~R 65 (171)
|+||||+|+++++++... +.+++++|..||||++.+....++. |.||+++|++++|++++||
T Consensus 141 l~fgSw~y~~~~l~l~~~---~~~dl~~~~~n~EW~l~~~~~~r~~~~Y~CC~~~y~dit~~i~lrR 204 (205)
T 4aoe_A 141 LKFGPWTYDVRDLVLDES---QQVDLTTYAGGERFQLIEAKQKVNKKTYPCCPQSFEDIELRVTFKK 204 (205)
T ss_dssp EEEECSSCCTTTEEEECS---SSCBCTTSCTTCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred EEEECccCChheEEEecC---cccchhccccCCcEEEEeeEEEEEEEEeCCCCCCcceEEEEEEEEE
Confidence 689999999999999743 3578889999999999999987764 7889999999999999999
No 24
>4aod_A Acetylcholine-binding protein type 1; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholine receptor; 6.00A {Biomphalaria glabrata}
Probab=99.42 E-value=1.2e-13 Score=104.89 Aligned_cols=62 Identities=27% Similarity=0.463 Sum_probs=55.0
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE--ecCCCCCeeEEEEEEEEEe
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV--YDEHQPTETDITFYIIIRR 65 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~--~~~~~~~y~~i~~~~~l~R 65 (171)
|+||||+|+++++++.|.. .+++++|..||||++.+....++. |.||+++|++++|+|++||
T Consensus 141 l~fgSw~y~~~~i~l~~~~---~~dl~~~~~n~EW~l~~~~~~~~~~~Y~cc~~~Y~~it~~~~lrR 204 (205)
T 4aod_A 141 LKSGSWTHSTQELTLEVNA---KVDLGDYASDTRFQLLNATQQVNRKQYPCCPETYEDTTLSFTFRK 204 (205)
T ss_dssp EEEEESSCCTTTEEEECSS---SCBCTTSCTTCSSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEC
T ss_pred EEEECccccccEEEEEECC---CcccccccccCCEEEEeeEEEEEEEEeCCCCCCcceEEEEEEEEC
Confidence 6899999999999999753 467889999999999999987764 7789999999999999966
No 25
>3igq_A GLR4197 protein; plgic Cys-loop, membrane protein, transport protein; 2.30A {Gloeobacter violaceus}
Probab=99.40 E-value=3.4e-13 Score=102.07 Aligned_cols=69 Identities=16% Similarity=0.159 Sum_probs=52.3
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE--ecCCCCCeeEEEEEEEEEeecceeE
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV--YDEHQPTETDITFYIIIRRKTLFYT 71 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~--~~~~~~~y~~i~~~~~l~R~~~~y~ 71 (171)
|+||||+|+++++++.|.+ ..++.+++..++||++.+....++. |.||+++|++++|++.+|||.+.+.
T Consensus 128 l~f~S~~y~~~~v~l~~~~--~~~~~~~~~~~~ew~l~~~~~~~~~~~y~cc~~~y~~i~f~i~irR~~~~~~ 198 (201)
T 3igq_A 128 IYLIVRSVDTRNIVLAVDL--EKVGKNDDVFLTGWDIESFTAVVKPANFALEDRLESKLDYQLRISRQGGHHH 198 (201)
T ss_dssp EEEEECCCSSCCEEEEECG--GGCEESCSEEETTEEEEEEEEEEEC--------CCCEEEEEEEEEEC-----
T ss_pred EEEeccCCCceEEEEEecC--CccccccCcccCCeEEEeeEEEEEEEEeCCCCCccCeEEEEEEEEECCCCCC
Confidence 6899999999999999974 3567788999999999999987764 6788899999999999999998753
No 26
>2qc1_B Acetylcholine receptor subunit alpha; nicotinic acetylcholine receptor, glycosylated protein, beta sandwich, Cys-loop, buried hydrophilic residues; HET: NAG MAN; 1.94A {Mus musculus} PDB: 1l4w_B 1ljz_B
Probab=99.34 E-value=2.9e-12 Score=97.63 Aligned_cols=65 Identities=31% Similarity=0.539 Sum_probs=56.9
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE--ecCCC-CCeeEEEEEEEEEeec
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV--YDEHQ-PTETDITFYIIIRRKT 67 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~--~~~~~-~~y~~i~~~~~l~R~~ 67 (171)
|+||||+|+++++++.|..+ .++++++..++||++.+....++. +.+|+ ++|++++|+|++||||
T Consensus 145 l~f~S~~y~~~~v~l~~~~~--~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~~~~y~~i~~~~~l~R~p 212 (212)
T 2qc1_B 145 MKLGTRTYDGSAVAINPESD--QPDLSNFMESGEWVIKEARGWKHWVFYSCCPTTPYLDITYHFVMQRLP 212 (212)
T ss_dssp EEEEESSCCTTTEEEEESCS--SCBCTTCCCCSSEEEEEEEEEEEEEEETTCSSCCEEEEEEEEEEEECC
T ss_pred EEEEcccccCceEEEEeccc--ccchhhCccCCCEEEEEeEEEEEEEecCCCCCCCeeEEEEEEEEEECc
Confidence 68999999999999999754 467888999999999999877654 66777 8999999999999996
No 27
>2bj0_A Acetylcholine-binding protein; 3D-structure, glycoprotein, glycprotein, IGG fold, immunoglobulin domain, pentamer, signal; HET: CXS; 2.0A {Bulinus truncatus}
Probab=99.33 E-value=2.7e-12 Score=97.16 Aligned_cols=65 Identities=28% Similarity=0.526 Sum_probs=56.5
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE--ecCCCCCeeEEEEEEEEEee
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV--YDEHQPTETDITFYIIIRRK 66 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~--~~~~~~~y~~i~~~~~l~R~ 66 (171)
|+||||+|+++++++.|..++ .++.+++..++||++.+....++. |.||+++|++++|+|++|||
T Consensus 137 l~f~S~~y~~~~v~l~~~~~~-~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~~~y~~l~~~~~l~R~ 203 (203)
T 2bj0_A 137 IKVGSWTHDNKQFALITGEEG-VVNIAEYFDSPKFDLLSATQSLNRKKYSCCENMYDDIEITFAFRKK 203 (203)
T ss_dssp EEEEESSCCTTTEEEEECTTT-TSCTTTTCCCSSEEEEEEEEEEEEEECTTCSSEEEEEEEEEEEEEC
T ss_pred EEEEcccccCcEEEEEecCCC-ccchhcceecCCEEEEEeEEEEEEEecCCCCCCeeEEEEEEEEEEC
Confidence 689999999999999997532 267788999999999999887654 66789999999999999997
No 28
>3sq6_A ACHBP, neuronal acetylcholine receptor subunit alpha-7, acetylcholine-binding protein; nicotinic receptor; HET: EPJ NAG; 2.80A {Homo sapiens} SCOP: b.96.1.1 PDB: 3sq9_A*
Probab=99.29 E-value=5.2e-12 Score=95.72 Aligned_cols=63 Identities=27% Similarity=0.534 Sum_probs=55.0
Q ss_pred CeEecceecCCeEEEEEcCCCcccccccccccccEEEeEeeeEEEE--ecCCCCCeeEEEEEEEEEeec
Q psy11692 1 MKFGSWTFNGDQVSLALYNDKNFVDLSDYWKSGTWDIIEVPAYLNV--YDEHQPTETDITFYIIIRRKT 67 (171)
Q Consensus 1 L~f~Sw~y~~~~v~l~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~--~~~~~~~y~~i~~~~~l~R~~ 67 (171)
|+||||+|+++++++.+. .++.+++.++|||++.+....++. +.||+++|++++|+|++|||.
T Consensus 140 l~f~S~~y~~~~v~l~~~----~~~~~~~~~~~eW~l~~~~~~~~~~~y~~c~~~y~~i~~~~~lrRr~ 204 (204)
T 3sq6_A 140 LKFGSWTHHSRELDLQMQ----EADISGYIPYSRFELVGVTQKRSERFYECCKEPYPDVTFTVTFRKKG 204 (204)
T ss_dssp EEEEESSCCTTTEEEECC----CCCCTTSCSSSSEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEECC
T ss_pred EEEEeecccCeEEEEEec----cCCHHHcccCCCEEEEEeEEEEEEEeeCCCCCCcceEEEEEEEEECc
Confidence 589999999999999864 256778999999999999987664 568899999999999999983
No 29
>1mot_A Glycine receptor alpha-1 chain; second transmembrane domain, micelles, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=95.03 E-value=0.00052 Score=34.91 Aligned_cols=27 Identities=26% Similarity=0.315 Sum_probs=24.3
Q ss_pred CceEEehhHHHHHHHHHHHHhhhcCCC
Q psy11692 96 GEKVTLGISILLSLVVFLLLVSKILPP 122 (171)
Q Consensus 96 ~~r~~l~~t~lL~~~~~l~~v~~~lP~ 122 (171)
++|+++|++++|+++.+...++.++|+
T Consensus 2 paRv~LGittvLt~tt~~~~~~~~lPk 28 (28)
T 1mot_A 2 PARVGLGITTVLTMTTQSSGSRASLPK 28 (28)
T ss_dssp CHHHHHHHHHHHHHCCSSSSSSSSCCC
T ss_pred CceEEEcchhHHHHHHHHhhHhhhCCC
Confidence 679999999999999998888888885
No 30
>1fjk_A Cardiac phospholamban; helix, membrane protein; NMR {Sus scrofa} SCOP: j.37.1.1 PDB: 1fjp_A 2kyv_A 1zll_A 2hyn_A 1n7l_A 2kb7_P 1plp_A
Probab=22.17 E-value=1.1e+02 Score=16.81 Aligned_cols=20 Identities=20% Similarity=0.434 Sum_probs=14.4
Q ss_pred chhhHHHHHHHHHHHHHHHH
Q psy11692 129 LIAKYLLFTFIMNTVKSACL 148 (171)
Q Consensus 129 ~i~~y~~~~~~~v~~s~~~~ 148 (171)
+-..|.-+|++++++-+++.
T Consensus 28 lqelfvnfclilicllli~i 47 (52)
T 1fjk_A 28 LQNLFINFCLILIFLLLICI 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34578888999888776543
No 31
>2kv5_A FST, putative uncharacterized protein RNAI; toxin-antitoxin, bacterial, toxin; NMR {Enterococcus faecalis}
Probab=21.70 E-value=39 Score=17.29 Aligned_cols=23 Identities=22% Similarity=0.157 Sum_probs=19.5
Q ss_pred EEehhhHHHHHHHHHhhcccCCC
Q psy11692 73 NLILPTVLISFLCVLVFYLPAEA 95 (171)
Q Consensus 73 ~~~iP~~li~~l~~~~F~lp~~~ 95 (171)
+++.|-+.=+++.++.-|+....
T Consensus 7 ~IIaPivVGvvl~L~d~WLn~r~ 29 (33)
T 2kv5_A 7 LVIAPIFVGLVLEMISRVLDEED 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHcccc
Confidence 46789999999999999998754
Done!