BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy11694
         (655 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|345493482|ref|XP_001602523.2| PREDICTED: cathepsin L-like [Nasonia vitripennis]
          Length = 514

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 156/486 (32%), Positives = 240/486 (49%), Gaps = 55/486 (11%)

Query: 195 LSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV---FGVNKFFDLSESD-L 250
             VQH     S +E+  R  + F+ N  K   + ++     V     +NK+ D+   + +
Sbjct: 31  FKVQHKKGYNSDIEEKFRM-KIFMENKHKIAKHNAKYEMGLVPYKLQINKYADMLHHEFV 89

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
             L G N   T   +  S Q P  +          +F +  H  +LP++ DWR EG ++ 
Sbjct: 90  NTLNGFN--KTKPGMLQSYQKPVGA----------KFIAPAH-VELPKSVDWRQEGAVTP 136

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQ 368
           +K+QG C  CW+FSA G +E  H  Q   L  LS Q L+DC     N GCNGG MD+A +
Sbjct: 137 IKDQGHCGSCWSFSATGALEGQHFRQTGKLVSLSEQNLIDCSGKYGNNGCNGGLMDNAFK 196

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
           YI DN G+ ++  YPY+A + E  C           V  +  IP G+EE++K  +AT GP
Sbjct: 197 YIRDNKGLDTESTYPYEAEDDE--CRYNARNSGAEDVG-FVDIPEGDEEKLKAAIATIGP 253

Query: 429 LSVGMNAN--GLFYYSGGVIDLNQRLYGTSIPYWIVKNSWGSD------WGEKVEDKVGS 480
           +SV ++A+     +YS GV         T + + ++   +G+       W +     V +
Sbjct: 254 VSVAIDASHQTFQFYSTGVY-YEPECSSTELDHGVLVVGYGTSEDGQDYWKQGAVTPVKN 312

Query: 481 SGN--RTRDLELTGVLPSKLSR-------LATEKLVDCD--MSNGGCNGGRMDDALQYII 529
            GN         TG L  +  R       L+ + LVDC     N GC+GG M++A  Y+ 
Sbjct: 313 QGNCGSCWAFSATGSLEGQHFRHNGSLISLSEQNLVDCSGRFGNDGCDGGLMNNAFTYVK 372

Query: 530 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 589
            N G+ S+++YPY+A E +R C    +         Y  IP G E +++  VAT GP+SV
Sbjct: 373 VNRGLDSEKSYPYEA-EDDR-CRYNPKNS-AADDAGYVNIPTGSESKLQAAVATVGPISV 429

Query: 590 GMNANG---LFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWG 646
            ++A+    +FY+SG   + +   C+    +H ++ +GYG + K   T   +W+VKNSWG
Sbjct: 430 AIDADSDSFMFYHSGVYYEPD---CSRTDLDHGVLAIGYGTDSK---TGKQFWLVKNSWG 483

Query: 647 SDWGEK 652
            DWGEK
Sbjct: 484 EDWGEK 489



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 155/517 (29%), Positives = 234/517 (45%), Gaps = 95/517 (18%)

Query: 21  MIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDY 79
           ++   L    + Q   +L+  +  +  F   H K Y+S  +   R + F+ N  K A+  
Sbjct: 4   LVVFLLAAIAVTQAVSFLDLVLEEWKTFKVQHKKGYNSDIEEKFRMKIFMENKHKIAKHN 63

Query: 80  QREDSGTAVF--EVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRA 136
            + + G   +  ++NK+ D+   + +  L G N   T   +  S Q P  +         
Sbjct: 64  AKYEMGLVPYKLQINKYADMLHHEFVNTLNGFN--KTKPGMLQSYQKPVGA--------- 112

Query: 137 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELS 196
            +F +  H  +LP++ DWR EG ++ +K+QG C  CW+FSA G +E  H  Q   L  LS
Sbjct: 113 -KFIAPAH-VELPKSVDWRQEGAVTPIKDQGHCGSCWSFSATGALEGQHFRQTGKLVSLS 170

Query: 197 VQH-----------------HDKVYSSVEDLLRRHENFVTNVEKAED----YQSEDSGTA 235
            Q+                  D  +  + D  +  +   T   +AED    Y + +SG  
Sbjct: 171 EQNLIDCSGKYGNNGCNGGLMDNAFKYIRD-NKGLDTESTYPYEAEDDECRYNARNSGAE 229

Query: 236 VFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS------ 289
             G   F D+ E D ++L      + +  I P   A  +S+QT      FQF S      
Sbjct: 230 DVG---FVDIPEGDEEKLK-----AAIATIGPVSVAIDASHQT------FQFYSTGVYYE 275

Query: 290 -------LRHG------DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 336
                  L HG          +  D+  +G ++ VK QG C  CWAFSA G +E  H   
Sbjct: 276 PECSSTELDHGVLVVGYGTSEDGQDYWKQGAVTPVKNQGNCGSCWAFSATGSLEGQHFRH 335

Query: 337 GNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 394
             SL  LS Q LVDC     N GC+GG M++A  Y+  N G+ S+++YPY+A E +R C 
Sbjct: 336 NGSLISLSEQNLVDCSGRFGNDGCDGGLMNNAFTYVKVNRGLDSEKSYPYEA-EDDR-CR 393

Query: 395 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG---LFYYSG-------G 444
              +         Y  IP G E +++  VAT GP+SV ++A+    +FY+SG        
Sbjct: 394 YNPKNS-AADDAGYVNIPTGSESKLQAAVATVGPISVAIDADSDSFMFYHSGVYYEPDCS 452

Query: 445 VIDLNQRL----YGTSIP----YWIVKNSWGSDWGEK 473
             DL+  +    YGT       +W+VKNSWG DWGEK
Sbjct: 453 RTDLDHGVLAIGYGTDSKTGKQFWLVKNSWGEDWGEK 489


>gi|391328503|ref|XP_003738728.1| PREDICTED: digestive cysteine proteinase 3-like [Metaseiulus
           occidentalis]
          Length = 506

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 227/462 (49%), Gaps = 53/462 (11%)

Query: 213 RHENFVTNVEKAEDYQ-SEDSGTAVF--GVNKFFDLSESDLQQLTGLNLDSTLEDIQPSL 269
           R   F  NV++   +  + D G   +  G+N+F D+S S+ + + GL             
Sbjct: 50  RQRIFNENVDRINAHNLAHDLGLTSYRMGLNEFTDMSRSEYELVRGLR------------ 97

Query: 270 QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 329
              +S  QT      F         +LP+  D+R  G ++ VK QG C  CWAFSA G +
Sbjct: 98  ---YSGEQTARTGHPFTLTQ-NPDRELPKKVDYRKSGHVTPVKNQGLCGSCWAFSATGSL 153

Query: 330 EAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 389
           E   +IQ  +L  LS Q L+DC   N GC+GG MD A +YI  NGG+ ++++YPY     
Sbjct: 154 EGQLSIQNGTLVSLSEQNLLDCSRENQGCDGGYMDKAFEYIKKNGGIDTEESYPYTG--- 210

Query: 390 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVID 447
            +G  + +++    +V  +  +P  +E+ +K  VA  GP+SVG++A  +   +Y  G+ D
Sbjct: 211 RKGKCMFKKKNIGARVTGHVDVPAEDEQALKLAVAKIGPISVGIDASKDSFRFYKEGIYD 270

Query: 448 LNQRLYGTSIPYWIVKNSWGSDWGE-----------KVEDKVGSSGNRTRDLELTG---V 493
                  + + + ++   +GS+ G+           K + + GS    +    L G    
Sbjct: 271 -ESSCSTSQLDHGVLVVGYGSEKGKDYWLEGYVTPVKDQGQCGSCWAFSTTGSLEGQHFK 329

Query: 494 LPSKLSRLATEKLVDC--DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
              KL  L+ + LVDC  D  N GC GG MD    YI +NGG+ ++++YPY A   E G 
Sbjct: 330 ATGKLVSLSEQNLVDCSGDEGNNGCEGGLMDQGFTYIKNNGGIDTEESYPYNA---EDGD 386

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQR 609
              +      +V  +  I  G E+ ++K VAT GP+SV ++A  +    Y  G+ D  + 
Sbjct: 387 CAFKSNAVGARVTGFVDIDSGSEKALQKAVATVGPVSVAIDASNDSFQLYKEGIYD--EP 444

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C+    +H ++ VGYG E   D     YW+VKNSW + WG+
Sbjct: 445 ACSSTQLDHGVLAVGYGSENGVD-----YWLVKNSWNTVWGQ 481



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 195/462 (42%), Gaps = 84/462 (18%)

Query: 65  RHENFVTNVEKAEDYQ-REDSGTAVFE--VNKFFDLSDSDLQQLTGLNLDSTLEDIQPSL 121
           R   F  NV++   +    D G   +   +N+F D+S S+ + + GL             
Sbjct: 50  RQRIFNENVDRINAHNLAHDLGLTSYRMGLNEFTDMSRSEYELVRGLR------------ 97

Query: 122 QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 181
              +S  QT      F         +LP+  D+R  G ++ VK QG C  CWAFSA G +
Sbjct: 98  ---YSGEQTARTGHPFTLTQ-NPDRELPKKVDYRKSGHVTPVKNQGLCGSCWAFSATGSL 153

Query: 182 EAMHAIQGNNLTELSVQ---------------HHDKVYSSVE------------------ 208
           E   +IQ   L  LS Q               + DK +  ++                  
Sbjct: 154 EGQLSIQNGTLVSLSEQNLLDCSRENQGCDGGYMDKAFEYIKKNGGIDTEESYPYTGRKG 213

Query: 209 DLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPS 268
             + + +N    V    D  +ED       V K   +S         + +D++ +  +  
Sbjct: 214 KCMFKKKNIGARVTGHVDVPAEDEQALKLAVAKIGPIS---------VGIDASKDSFRFY 264

Query: 269 LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGV 328
            +  +  +   T         + +G +  +  D+  EG ++ VK+QG+C  CWAFS  G 
Sbjct: 265 KEGIYDESSCSTSQLDHGVLVVGYGSE--KGKDYWLEGYVTPVKDQGQCGSCWAFSTTGS 322

Query: 329 VEAMHAIQGNSLTELSVQQLVDC--DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKA 386
           +E  H      L  LS Q LVDC  D  N GC GG MD    YI +NGG+ ++++YPY A
Sbjct: 323 LEGQHFKATGKLVSLSEQNLVDCSGDEGNNGCEGGLMDQGFTYIKNNGGIDTEESYPYNA 382

Query: 387 SESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGG 444
              E G    +      +V  +  I  G E+ ++K VAT GP+SV ++A  +    Y  G
Sbjct: 383 ---EDGDCAFKSNAVGARVTGFVDIDSGSEKALQKAVATVGPVSVAIDASNDSFQLYKEG 439

Query: 445 VID--------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           + D        L+  +    YG+   + YW+VKNSW + WG+
Sbjct: 440 IYDEPACSSTQLDHGVLAVGYGSENGVDYWLVKNSWNTVWGQ 481


>gi|86279349|gb|ABC88770.1| putative cathepsin L-like proteinase [Tenebrio molitor]
          Length = 416

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/376 (35%), Positives = 194/376 (51%), Gaps = 37/376 (9%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           L  + DWR+   +S+VK+QG+C  CW+FS  G +E   A+Q   LT LS Q L+DC  S 
Sbjct: 35  LAASVDWRSN-AVSEVKDQGQCGSCWSFSTTGAIEGQLALQRGRLTSLSEQNLIDCSSSY 93

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY 413
            N GC+GG MD A  YI D  G++S+ AYPY+A      C     +     +  Y  +P 
Sbjct: 94  GNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDY--CRFDSSQSV-TTLSGYYDLPS 149

Query: 414 GEEEEMKKWVATRGPLSVGMNANG-LFYYSGGVI--------DLNQRLYGTSIPYWIVKN 464
           G E  +   V   GP++V ++A   L +YSGG+         DLN  +    + Y     
Sbjct: 150 GGENSLADAVGQAGPVAVAIDATDELQFYSGGLFYDQTCNQSDLNHGV--LVVGYGSDNG 207

Query: 465 SWGSDWGEKVED--KVGSSGNRTRDLELTGVLP---SKLSRLATEKLVDCDMS--NGGCN 517
            WGS+   +V+D  + GS  + +    + G L     +L+ L+ + L+DC  S  N GC+
Sbjct: 208 HWGSNAVSEVKDQGQCGSCWSFSTTGAIEGQLALQRGRLTSLSEQNLIDCSSSYGNAGCD 267

Query: 518 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 577
           GG MD A  YI D  G++S+ AYPY+A      C     + F   +  Y  +P G E  +
Sbjct: 268 GGWMDSAFSYIPDY-GIMSEFAYPYEAQGDY--CRFDSSQ-FVTTLSGYYDLPSGGENSL 323

Query: 578 KKWVATRGPLSVGMNA-NGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSI 636
              V   GP++V ++A + L +YSGG+     + CN    NH + +VGYG +  +D    
Sbjct: 324 ADAVGQAGPVAVAIDAPDELQFYSGGL--FYDQTCNQSDLNHGVFVVGYGSDNGQD---- 377

Query: 637 PYWIVKNSWGSDWGEK 652
            YWI+KNSWG  WGE 
Sbjct: 378 -YWILKNSWGFGWGES 392



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 176/371 (47%), Gaps = 58/371 (15%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH-------- 199
           L  + DWR+   +S+VK+QG+C  CW+FS  G +E   A+Q   LT LS Q+        
Sbjct: 35  LAASVDWRSN-AVSEVKDQGQCGSCWSFSTTGAIEGQLALQRGRLTSLSEQNLIDCSSSY 93

Query: 200 ---------HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDL---SE 247
                     D  +S + D     E+     E   DY   DS  +V  ++ ++DL    E
Sbjct: 94  GNAGCDGGWMDSAFSYIHDYGIMSES-AYPYEAQGDYCRFDSSQSVTTLSGYYDLPSGGE 152

Query: 248 SDLQQLTG------LNLDST--LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEA 299
           + L    G      + +D+T  L+     L    + NQ+D          + +G D    
Sbjct: 153 NSLADAVGQAGPVAVAIDATDELQFYSGGLFYDQTCNQSDLNHGVL---VVGYGSDNGH- 208

Query: 300 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGG 357
             W +   +S+VK+QG+C  CW+FS  G +E   A+Q   LT LS Q L+DC  S  N G
Sbjct: 209 --WGSN-AVSEVKDQGQCGSCWSFSTTGAIEGQLALQRGRLTSLSEQNLIDCSSSYGNAG 265

Query: 358 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 417
           C+GG MD A  YI D  G++S+ AYPY+A      C     + F   +  Y  +P G E 
Sbjct: 266 CDGGWMDSAFSYIPDY-GIMSEFAYPYEAQGDY--CRFDSSQ-FVTTLSGYYDLPSGGEN 321

Query: 418 EMKKWVATRGPLSVGMNA-NGLFYYSGGVI--------DLNQRL----YGT--SIPYWIV 462
            +   V   GP++V ++A + L +YSGG+         DLN  +    YG+     YWI+
Sbjct: 322 SLADAVGQAGPVAVAIDAPDELQFYSGGLFYDQTCNQSDLNHGVFVVGYGSDNGQDYWIL 381

Query: 463 KNSWGSDWGEK 473
           KNSWG  WGE 
Sbjct: 382 KNSWGFGWGES 392


>gi|74273320|gb|ABA01328.1| secreted cathepsin F [Teladorsagia circumcincta]
          Length = 364

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 159/299 (53%), Gaps = 37/299 (12%)

Query: 190 NNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD 249
           N+ T   ++ HDKVY +  + L+R   F  N+E     Q  D GTA++G+N+F DLS  +
Sbjct: 62  NHFTSF-IERHDKVYRNESEALKRFGIFKRNLEIIRSAQENDKGTAIYGINQFADLSPEE 120

Query: 250 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS--LRHGDDLPEAFDWRAEGV 307
            ++                   P +  Q D   R     +  +   + LPE+FDWR  G 
Sbjct: 121 FKKT----------------HLPHTWKQPDHPNRIVDLAAEGVDPKEPLPESFDWREHGA 164

Query: 308 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDAL 367
           ++KVK +G CA CWAFS  G +E    +    L  LS QQL+DCD+ + GCNGG   DA 
Sbjct: 165 VTKVKTEGHCAACWAFSVTGNIEGQWFLAKKKLVSLSAQQLLDCDVVDEGCNGGFPLDAY 224

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           + I+  GG+  +  YPY+A ++E+  LV  +    V +     +P+ +EE+M+ W+  +G
Sbjct: 225 KEIVRMGGLEPEDKYPYEA-KAEQCRLVPSD--IAVYINGSVELPH-DEEKMRAWLVKKG 280

Query: 428 PLSVGMNANGLFYYSGGV-----IDLNQRLYGT---------SIPYWIVKNSWGSDWGE 472
           P+S+G+  + + +Y GGV       L+  ++G          +IPYWI+KNSWG +WGE
Sbjct: 281 PISIGITVDDIQFYKGGVSRPTTCRLSSMIHGALLVGYGVEKNIPYWIIKNSWGPNWGE 339



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 94/155 (60%), Gaps = 11/155 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++L+DCD+ + GCNGG   DA + I+  GG+  +  YPY+A ++E+  LV  +
Sbjct: 196 KLVSLSAQQLLDCDVVDEGCNGGFPLDAYKEIVRMGGLEPEDKYPYEA-KAEQCRLVPSD 254

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
               V +     +P+ +EE+M+ W+  +GP+S+G+  + + +Y GGV       C   + 
Sbjct: 255 --IAVYINGSVELPH-DEEKMRAWLVKKGPISIGITVDDIQFYKGGV--SRPTTCRLSSM 309

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            H  ++VGYG E+     +IPYWI+KNSWG +WGE
Sbjct: 310 IHGALLVGYGVEK-----NIPYWIIKNSWGPNWGE 339



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 87/198 (43%), Gaps = 23/198 (11%)

Query: 8   SLGEKGLGYLHTFMIKVALLESNIFQTRGYLNSPV-----TRFLNFMRDHDKVYSSVEDL 62
           S G K L  L T +I      S  F   G   SP        F +F+  HDKVY +  + 
Sbjct: 22  SGGVKPLTELRTDLIDKKTKGSIEFARLGQHISPKDFGAWNHFTSFIERHDKVYRNESEA 81

Query: 63  LRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQ 122
           L+R   F  N+E     Q  D GTA++ +N+F DLS  + ++                  
Sbjct: 82  LKRFGIFKRNLEIIRSAQENDKGTAIYGINQFADLSPEEFKKT----------------H 125

Query: 123 APFSSNQTDTEMRAFQFNS--LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGV 180
            P +  Q D   R     +  +   + LPE+FDWR  G ++KVK +G CA CWAFS  G 
Sbjct: 126 LPHTWKQPDHPNRIVDLAAEGVDPKEPLPESFDWREHGAVTKVKTEGHCAACWAFSVTGN 185

Query: 181 VEAMHAIQGNNLTELSVQ 198
           +E    +    L  LS Q
Sbjct: 186 IEGQWFLAKKKLVSLSAQ 203


>gi|308506829|ref|XP_003115597.1| CRE-TAG-196 protein [Caenorhabditis remanei]
 gi|308256132|gb|EFP00085.1| CRE-TAG-196 protein [Caenorhabditis remanei]
          Length = 475

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/292 (37%), Positives = 156/292 (53%), Gaps = 33/292 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H+K YS+  ++L+R   F  N +   + Q  + GTAV+G  KF D++  + +Q    
Sbjct: 176 IDRHEKRYSNKREVLKRFRTFKKNAKAIRELQKNEQGTAVYGFTKFSDMTTMEFKQ---- 231

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T+   Q   Q  +  +Q D E      +     +DLPE+FDWR +G +++VK QG 
Sbjct: 232 ----TMLPYQWE-QPVYPMDQADFEKEGITISE----EDLPESFDWRDKGAVTQVKNQGN 282

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G VE    +  N L  LS Q+LVDCD  + GCNGG   +A + II  GG+
Sbjct: 283 CGSCWAFSTTGNVEGAWFLAKNKLVSLSEQELVDCDGVDQGCNGGLPSNAYKEIIRMGGL 342

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
             + AYPY   + E   LV ++    V +     +P+ +E EM+KW+ T+GP+S+G+NAN
Sbjct: 343 EPEDAYPYDG-KGETCHLVRKD--IAVYINGSIELPH-DEVEMQKWLVTKGPISIGLNAN 398

Query: 437 GLFYYSGGVID----------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            L +Y  GV+           LN  +    YG     PYWIVKNSWG  WGE
Sbjct: 399 TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGE 450



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/156 (42%), Positives = 97/156 (62%), Gaps = 9/156 (5%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           +KL  L+ ++LVDCD  + GCNGG   +A + II  GG+  + AYPY   + E   LV +
Sbjct: 304 NKLVSLSEQELVDCDGVDQGCNGGLPSNAYKEIIRMGGLEPEDAYPYDG-KGETCHLVRK 362

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
           +    V +     +P+ +E EM+KW+ T+GP+S+G+NAN L +Y  GV+   +  C P  
Sbjct: 363 D--IAVYINGSIELPH-DEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFM 419

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NH ++IVGYG++ +K     PYWIVKNSWG  WGE
Sbjct: 420 LNHGVLIVGYGKDGRK-----PYWIVKNSWGPTWGE 450



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 19/175 (10%)

Query: 26  LLESNIFQTRGYL--NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRED 83
           L ++ I + R Y+  NS    FL+F+  H+K YS+  ++L+R   F  N +   + Q+ +
Sbjct: 155 LRKAKIIRPRDYVIWNS----FLDFIDRHEKRYSNKREVLKRFRTFKKNAKAIRELQKNE 210

Query: 84  SGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 143
            GTAV+   KF D++  + +Q        T+   Q   Q  +  +Q D E      +   
Sbjct: 211 QGTAVYGFTKFSDMTTMEFKQ--------TMLPYQWE-QPVYPMDQADFEKEGITISE-- 259

Query: 144 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             +DLPE+FDWR +G +++VK QG C  CWAFS  G VE    +  N L  LS Q
Sbjct: 260 --EDLPESFDWRDKGAVTQVKNQGNCGSCWAFSTTGNVEGAWFLAKNKLVSLSEQ 312


>gi|71993922|ref|NP_505215.2| Protein TAG-196 [Caenorhabditis elegans]
 gi|351050011|emb|CCD64084.1| Protein TAG-196 [Caenorhabditis elegans]
          Length = 477

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/292 (37%), Positives = 155/292 (53%), Gaps = 33/292 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  H+K Y++  ++L+R   F  N +   + Q  + GTAV+G  KF D++  + +++   
Sbjct: 178 VDRHEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTKFSDMTTMEFKKIM-- 235

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L    E      Q  +   Q + E      N     +DLPE+FDWR +G +++VK QG 
Sbjct: 236 -LPYQWE------QPVYPMEQANFEKHDVTINE----EDLPESFDWREKGAVTQVKNQGN 284

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G VE    I  N L  LS Q+LVDCD  + GCNGG   +A + II  GG+
Sbjct: 285 CGSCWAFSTTGNVEGAWFIAKNKLVSLSEQELVDCDSMDQGCNGGLPSNAYKEIIRMGGL 344

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
             + AYPY     E   LV ++    V +     +P+ +E EM+KW+ T+GP+S+G+NAN
Sbjct: 345 EPEDAYPYDG-RGETCHLVRKD--IAVYINGSVELPH-DEVEMQKWLVTKGPISIGLNAN 400

Query: 437 GLFYYSGGVID----------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            L +Y  GV+           LN  +    YG     PYWIVKNSWG +WGE
Sbjct: 401 TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPNWGE 452



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 98/159 (61%), Gaps = 9/159 (5%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +  +KL  L+ ++LVDCD  + GCNGG   +A + II  GG+  + AYPY     E   L
Sbjct: 303 IAKNKLVSLSEQELVDCDSMDQGCNGGLPSNAYKEIIRMGGLEPEDAYPYDG-RGETCHL 361

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCN 612
           V ++    V +     +P+ +E EM+KW+ T+GP+S+G+NAN L +Y  GV+   +  C 
Sbjct: 362 VRKD--IAVYINGSVELPH-DEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCE 418

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           P   NH ++IVGYG++ +K     PYWIVKNSWG +WGE
Sbjct: 419 PFMLNHGVLIVGYGKDGRK-----PYWIVKNSWGPNWGE 452



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 19/175 (10%)

Query: 26  LLESNIFQTRGYL--NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRED 83
           L ++ I + R Y+  NS    FL+F+  H+K Y++  ++L+R   F  N +   + Q+ +
Sbjct: 157 LRKAKIIRPRDYVIWNS----FLDFVDRHEKKYTNKREVLKRFRVFKKNAKVIRELQKNE 212

Query: 84  SGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 143
            GTAV+   KF D++  + +++    L    E      Q  +   Q + E      N   
Sbjct: 213 QGTAVYGFTKFSDMTTMEFKKIM---LPYQWE------QPVYPMEQANFEKHDVTINE-- 261

Query: 144 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             +DLPE+FDWR +G +++VK QG C  CWAFS  G VE    I  N L  LS Q
Sbjct: 262 --EDLPESFDWREKGAVTQVKNQGNCGSCWAFSTTGNVEGAWFIAKNKLVSLSEQ 314


>gi|244790097|ref|NP_001156454.1| cathepsin F isoform 2 precursor [Acyrthosiphon pisum]
          Length = 586

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 42/299 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H+K+Y+S+E+  RR   F  N++K +  Q+ + G+A++G  +F DL++++ ++   L
Sbjct: 284 IMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQGSAIYGATQFADLTKNEFKK-KYL 342

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            LDS++                 T  +      +     +P  FDWR   V++ VK QG 
Sbjct: 343 GLDSSM-----------------TSKKTLPMAVIPQSASIPNEFDWRNHNVVTPVKNQGA 385

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFSA+  +E  +A++   L  LS Q+L+DCD  + GC GG M  A + + + GG+
Sbjct: 386 CGSCWAFSAIANIEGQYALKSKELLSLSEQELIDCDNLDNGCGGGLMTQAFEAVENLGGL 445

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPY+     +GC + + +  KV + +   +   +EE++ K++   GPLSVG+NAN
Sbjct: 446 ETESDYPYEGHADRKGCQLKKSD-VKVSISKAVNVS-TDEEDIAKFLVKHGPLSVGVNAN 503

Query: 437 GLFYYSGGVIDLNQRL--------------YGT--------SIPYWIVKNSWGSDWGEK 473
            + +Y GGV      L              YG         ++PYW++KNSWG  WGEK
Sbjct: 504 AMQFYMGGVSHPIHALCSPKSLDHGVAIVGYGVHRTKYTHKNLPYWLIKNSWGPGWGEK 562



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 95/156 (60%), Gaps = 3/156 (1%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++L+DCD  + GC GG M  A + + + GG+ ++  YPY+     +GC + + +
Sbjct: 409 LLSLSEQELIDCDNLDNGCGGGLMTQAFEAVENLGGLETESDYPYEGHADRKGCQLKKSD 468

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
             KV + +   +   +EE++ K++   GPLSVG+NAN + +Y GGV      LC+PK+ +
Sbjct: 469 -VKVSISKAVNVS-TDEEDIAKFLVKHGPLSVGVNANAMQFYMGGVSHPIHALCSPKSLD 526

Query: 618 HALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
           H + IVGYG    K    ++PYW++KNSWG  WGEK
Sbjct: 527 HGVAIVGYGVHRTKYTHKNLPYWLIKNSWGPGWGEK 562



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 18/156 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           T F NF+  H+K+Y+S+E+  RR   F  N++K +  Q  + G+A++   +F DL+ ++ 
Sbjct: 278 TDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQGSAIYGATQFADLTKNEF 337

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           ++   L LDS++                 T  +      +     +P  FDWR   V++ 
Sbjct: 338 KK-KYLGLDSSM-----------------TSKKTLPMAVIPQSASIPNEFDWRNHNVVTP 379

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CWAFSA+  +E  +A++   L  LS Q
Sbjct: 380 VKNQGACGSCWAFSAIANIEGQYALKSKELLSLSEQ 415


>gi|195497262|ref|XP_002096026.1| GE25302 [Drosophila yakuba]
 gi|194182127|gb|EDW95738.1| GE25302 [Drosophila yakuba]
          Length = 615

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 150/292 (51%), Gaps = 42/292 (14%)

Query: 204 YSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLE 263
           Y S  +   R   F  N++  E     + G+A +G+ +F D++ S+ ++ TGL       
Sbjct: 320 YVSTAERQMRLRIFRQNLKTIEQLNVNEMGSAKYGITEFADMTSSEYKERTGL------- 372

Query: 264 DIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAF 323
                    +  N+      +       HG+ LP+ FDWR +  +++VK QG C  CWAF
Sbjct: 373 ---------WQRNEAKATGGSVAVVPAYHGE-LPKEFDWRQKNAVTQVKNQGSCGSCWAF 422

Query: 324 SAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYP 383
           S  G +E +HA++   L E S Q+L+DCD ++  CNGG MD+A + I D GG+  +  YP
Sbjct: 423 SVTGNIEGLHAVKTGDLKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYP 482

Query: 384 YKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSG 443
           YKA +++  C         V+V  +  +P G E  M++W+ T GP+S+G+NAN + +Y G
Sbjct: 483 YKAKKNQ--CHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLTNGPISIGINANAMQFYRG 539

Query: 444 GVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWGEK 473
           GV    + L              YG S        +PYWIVKNSWG  WGE+
Sbjct: 540 GVSHPWKALCSKKNLDHGVLVVGYGVSEYPNFHKTLPYWIVKNSWGPRWGEQ 591



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 99/164 (60%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  V    L   + ++L+DCD ++  CNGG MD+A + I D GG+  +  YPYKA +++ 
Sbjct: 431 LHAVKTGDLKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQ- 489

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C         V+V  +  +P G E  M++W+ T GP+S+G+NAN + +Y GGV    + 
Sbjct: 490 -CHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLTNGPISIGINANAMQFYRGGVSHPWKA 547

Query: 610 LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H +++VGYG  E  +   ++PYWIVKNSWG  WGE+
Sbjct: 548 LCSKKNLDHGVLVVGYGVSEYPNFHKTLPYWIVKNSWGPRWGEQ 591



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F     + Y S  +   R   F  N++  E     + G+A + + +F D++ S+ ++
Sbjct: 309 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEQLNVNEMGSAKYGITEFADMTSSEYKE 368

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TGL                +  N+      +       HG+ LP+ FDWR +  +++VK
Sbjct: 369 RTGL----------------WQRNEAKATGGSVAVVPAYHGE-LPKEFDWRQKNAVTQVK 411

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G +E +HA++  +L E S Q
Sbjct: 412 NQGSCGSCWAFSVTGNIEGLHAVKTGDLKEFSEQ 445


>gi|393906608|gb|EFO21301.2| ctsf protein [Loa loa]
          Length = 472

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/293 (35%), Positives = 149/293 (50%), Gaps = 36/293 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++   + YSSV + L R + ++ N+   E  Q E+ GTA++GV +F D+S  + Q+    
Sbjct: 174 IKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDMSPEEFQK---- 229

Query: 257 NLDSTLEDIQPSLQAP-FSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
                   + PSL      SN  + +++ F        ++LPE FDWR +GV++ VK QG
Sbjct: 230 -------TMLPSLWWDRVVSNGVEYDLKKFNLTF----NNLPEQFDWRTKGVVTPVKNQG 278

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGG 375
            C  CWAFS  G +E + AI+   L  LS Q+L+DCD  + GCNGG   +A + I   GG
Sbjct: 279 SCGSCWAFSVTGNIEGLWAIKTGKLISLSEQELIDCDRIDKGCNGGLPINAFREIQRMGG 338

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           +  +  YPYKA     G          V + +   IP   E  MK W+  RGPLSVG++A
Sbjct: 339 LEPEDQYPYKA---RNGTCHLIRSAIAVTIDDAVEIPRN-ETVMKAWIVQRGPLSVGIDA 394

Query: 436 NGLFYYSGGVIDLNQRL--------------YGTS--IPYWIVKNSWGSDWGE 472
             L YY  G++  ++                YG    +PYW +KNSWG  WGE
Sbjct: 395 KLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENGLPYWTIKNSWGDQWGE 447



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 9/162 (5%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  +   KL  L+ ++L+DCD  + GCNGG   +A + I   GG+  +  YPYKA     
Sbjct: 295 LWAIKTGKLISLSEQELIDCDRIDKGCNGGLPINAFREIQRMGGLEPEDQYPYKA---RN 351

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
           G          V + +   IP  E   MK W+  RGPLSVG++A  L YY  G++  ++ 
Sbjct: 352 GTCHLIRSAIAVTIDDAVEIPRNETV-MKAWIVQRGPLSVGIDAKLLAYYKSGILHPSRS 410

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C P   +H ++I GYG E       +PYW +KNSWG  WGE
Sbjct: 411 RCPPSGIDHGVLITGYGVE-----NGLPYWTIKNSWGDQWGE 447



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 16/155 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           FL+F++   + YSSV + L R + ++ N+   E  Q E+ GTA++ V +F D+S  + Q+
Sbjct: 170 FLDFIKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDMSPEEFQK 229

Query: 105 LTGLNLDSTLEDIQPSLQAP-FSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                       + PSL      SN  + +++ F        ++LPE FDWR +GV++ V
Sbjct: 230 -----------TMLPSLWWDRVVSNGVEYDLKKFNLTF----NNLPEQFDWRTKGVVTPV 274

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS  G +E + AI+   L  LS Q
Sbjct: 275 KNQGSCGSCWAFSVTGNIEGLWAIKTGKLISLSEQ 309


>gi|312080834|ref|XP_003142769.1| ctsf protein [Loa loa]
          Length = 437

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 149/294 (50%), Gaps = 38/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ--LT 254
           ++   + YSSV + L R + ++ N+   E  Q E+ GTA++GV +F D+S  + Q+  L 
Sbjct: 139 IKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDMSPEEFQKTMLP 198

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
            L  D  +            SN  + +++ F        ++LPE FDWR +GV++ VK Q
Sbjct: 199 SLWWDRVV------------SNGVEYDLKKFNLTF----NNLPEQFDWRTKGVVTPVKNQ 242

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNG 374
           G C  CWAFS  G +E + AI+   L  LS Q+L+DCD  + GCNGG   +A + I   G
Sbjct: 243 GSCGSCWAFSVTGNIEGLWAIKTGKLISLSEQELIDCDRIDKGCNGGLPINAFREIQRMG 302

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+  +  YPYKA     G          V + +   IP   E  MK W+  RGPLSVG++
Sbjct: 303 GLEPEDQYPYKA---RNGTCHLIRSAIAVTIDDAVEIPR-NETVMKAWIVQRGPLSVGID 358

Query: 435 ANGLFYYSGGVIDLNQRL--------------YGTS--IPYWIVKNSWGSDWGE 472
           A  L YY  G++  ++                YG    +PYW +KNSWG  WGE
Sbjct: 359 AKLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENGLPYWTIKNSWGDQWGE 412



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 9/162 (5%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  +   KL  L+ ++L+DCD  + GCNGG   +A + I   GG+  +  YPYKA     
Sbjct: 260 LWAIKTGKLISLSEQELIDCDRIDKGCNGGLPINAFREIQRMGGLEPEDQYPYKA---RN 316

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
           G          V + +   IP   E  MK W+  RGPLSVG++A  L YY  G++  ++ 
Sbjct: 317 GTCHLIRSAIAVTIDDAVEIPR-NETVMKAWIVQRGPLSVGIDAKLLAYYKSGILHPSRS 375

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C P   +H ++I GYG E       +PYW +KNSWG  WGE
Sbjct: 376 RCPPSGIDHGVLITGYGVE-----NGLPYWTIKNSWGDQWGE 412



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 18/156 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           FL+F++   + YSSV + L R + ++ N+   E  Q E+ GTA++ V +F D+S  + Q+
Sbjct: 135 FLDFIKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDMSPEEFQK 194

Query: 105 --LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
             L  L  D  +            SN  + +++ F        ++LPE FDWR +GV++ 
Sbjct: 195 TMLPSLWWDRVV------------SNGVEYDLKKFNLTF----NNLPEQFDWRTKGVVTP 238

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CWAFS  G +E + AI+   L  LS Q
Sbjct: 239 VKNQGSCGSCWAFSVTGNIEGLWAIKTGKLISLSEQ 274


>gi|46948154|gb|AAT07059.1| cathepsin F-like cysteine proteinase, partial [Brugia malayi]
          Length = 461

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/292 (35%), Positives = 153/292 (52%), Gaps = 34/292 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++   + YSS+E+ L R   ++ N+  A+  Q E+ GTA++G  KF D++  + Q++   
Sbjct: 163 IKKFKREYSSIEEQLDRFRIYLQNMNFAKKLQFEEKGTAIYGATKFSDMTAEEFQKIM-- 220

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L S   D   S    F+ N  +  +            +LP  FDWR EGV++ VK+QG 
Sbjct: 221 -LPSIWWDRVESNGITFNLNDFNLSIY-----------NLPSKFDWRTEGVVTPVKDQGS 268

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G +E++ AI+   L  LS Q+L+DCD+ + GCNGG   +A + I   GG+
Sbjct: 269 CGSCWAFSVTGNIESLWAIKTGKLISLSEQELIDCDVIDKGCNGGLPINAFREIKRMGGL 328

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
             +  YPY   E++ G          V + +   IP   E  MK W+A RGPLSVG++A 
Sbjct: 329 EPEDQYPY---EAKNGTCHLVRAQIAVSIDDAVEIPRN-ETVMKAWIAQRGPLSVGIDAE 384

Query: 437 GLFYYSGGVI----------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            L YY  G++           +N  +    YG   ++PYW +KNSWG  WGE
Sbjct: 385 LLSYYKSGILHPSKSRCPPSKINHGVLITGYGIENNLPYWTIKNSWGEQWGE 436



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 9/162 (5%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  +   KL  L+ ++L+DCD+ + GCNGG   +A + I   GG+  +  YPY   E++ 
Sbjct: 284 LWAIKTGKLISLSEQELIDCDVIDKGCNGGLPINAFREIKRMGGLEPEDQYPY---EAKN 340

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
           G          V + +   IP  E   MK W+A RGPLSVG++A  L YY  G++  ++ 
Sbjct: 341 GTCHLVRAQIAVSIDDAVEIPRNETV-MKAWIAQRGPLSVGIDAELLSYYKSGILHPSKS 399

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C P   NH ++I GYG E      ++PYW +KNSWG  WGE
Sbjct: 400 RCPPSKINHGVLITGYGIE-----NNLPYWTIKNSWGEQWGE 436



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 14/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F+ F++   + YSS+E+ L R   ++ N+  A+  Q E+ GTA++   KF D++  + Q+
Sbjct: 159 FMTFIKKFKREYSSIEEQLDRFRIYLQNMNFAKKLQFEEKGTAIYGATKFSDMTAEEFQK 218

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +    L S   D   S    F+ N  +  +            +LP  FDWR EGV++ VK
Sbjct: 219 IM---LPSIWWDRVESNGITFNLNDFNLSIY-----------NLPSKFDWRTEGVVTPVK 264

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFS  G +E++ AI+   L  LS Q
Sbjct: 265 DQGSCGSCWAFSVTGNIESLWAIKTGKLISLSEQ 298


>gi|194898683|ref|XP_001978897.1| GG11133 [Drosophila erecta]
 gi|190650600|gb|EDV47855.1| GG11133 [Drosophila erecta]
          Length = 615

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 152/292 (52%), Gaps = 42/292 (14%)

Query: 204 YSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLE 263
           Y S  +   R   F  N++  E+  + + G+A +G+ +F DL+ S+ ++ TGL       
Sbjct: 320 YVSTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADLTSSEYKERTGL------- 372

Query: 264 DIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAF 323
                    +  ++      +       HG+ LP+ FDWR +  ++ VK QG C  CWAF
Sbjct: 373 ---------WQRDEAKATGGSAAVVPAYHGE-LPKEFDWRQKNAVTPVKNQGSCGSCWAF 422

Query: 324 SAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYP 383
           S  G +E ++A++   L E S Q+L+DCD ++  CNGG MD+A + I D GG+  +  YP
Sbjct: 423 SVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYP 482

Query: 384 YKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSG 443
           YKA +++  C         V+V  +  +P G E  M++W+ T+GP+S+G+NAN + +Y G
Sbjct: 483 YKAKKNQ--CHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLTKGPISIGINANAMQFYRG 539

Query: 444 GVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWGEK 473
           GV    + L              YG S        +PYWIVKNSWG  WGE+
Sbjct: 540 GVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 591



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 101/164 (61%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  V   +L   + ++L+DCD ++  CNGG MD+A + I D GG+  +  YPYKA +++ 
Sbjct: 431 LYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQ- 489

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C         V+V  +  +P G E  M++W+ T+GP+S+G+NAN + +Y GGV    + 
Sbjct: 490 -CHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLTKGPISIGINANAMQFYRGGVSHPWKA 547

Query: 610 LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H +++VGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 548 LCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 591



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F     + Y S  +   R   F  N++  E+    + G+A + + +F DL+ S+ ++
Sbjct: 309 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADLTSSEYKE 368

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TGL                +  ++      +       HG+ LP+ FDWR +  ++ VK
Sbjct: 369 RTGL----------------WQRDEAKATGGSAAVVPAYHGE-LPKEFDWRQKNAVTPVK 411

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G +E ++A++   L E S Q
Sbjct: 412 NQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQ 445


>gi|244790093|ref|NP_001156453.1| cathepsin F isoform 1 precursor [Acyrthosiphon pisum]
          Length = 586

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 155/297 (52%), Gaps = 42/297 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H+K+Y+S+E+  RR   F  N++K +  Q+ + G+A++G  +F DL++++ ++   L
Sbjct: 284 IMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQGSAIYGATQFADLTKNEFKK-KYL 342

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            LDS++                 T  +      +     +P  FDWR   V++ VK QG 
Sbjct: 343 GLDSSM-----------------TSKKTLPMAVIPQSASIPNEFDWRNHNVVTPVKNQGA 385

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFSA+  +E  +A++   L  LS Q+L+DCD  + GC GG M  A + + + GG+
Sbjct: 386 CGSCWAFSAIANIEGQYALKSKELLSLSEQELIDCDNLDNGCGGGLMTQAFEAVENLGGL 445

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPY+     +GC + + +  KV + +   +   +EE++ K++   GPLSVG+NAN
Sbjct: 446 ETESDYPYEGHADRKGCQLKKSD-VKVSISKAVNVS-TDEEDIAKFLVKHGPLSVGVNAN 503

Query: 437 GLFYYSGGV------------IDLNQRLYG----------TSIPYWIVKNSWGSDWG 471
            + +Y GGV            +D    + G           ++P+W +KNSWG  WG
Sbjct: 504 AMQFYMGGVSHPIHALCSPKSLDHGVAIVGYGVHKYPYLNATLPFWTIKNSWGDKWG 560



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 3/154 (1%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++L+DCD  + GC GG M  A + + + GG+ ++  YPY+     +GC + + +
Sbjct: 409 LLSLSEQELIDCDNLDNGCGGGLMTQAFEAVENLGGLETESDYPYEGHADRKGCQLKKSD 468

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
             KV + +   +   +EE++ K++   GPLSVG+NAN + +Y GGV      LC+PK+ +
Sbjct: 469 -VKVSISKAVNVS-TDEEDIAKFLVKHGPLSVGVNANAMQFYMGGVSHPIHALCSPKSLD 526

Query: 618 HALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWG 650
           H + IVGYG  +      ++P+W +KNSWG  WG
Sbjct: 527 HGVAIVGYGVHKYPYLNATLPFWTIKNSWGDKWG 560



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 18/156 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           T F NF+  H+K+Y+S+E+  RR   F  N++K +  Q  + G+A++   +F DL+ ++ 
Sbjct: 278 TDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQGSAIYGATQFADLTKNEF 337

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           ++   L LDS++                 T  +      +     +P  FDWR   V++ 
Sbjct: 338 KK-KYLGLDSSM-----------------TSKKTLPMAVIPQSASIPNEFDWRNHNVVTP 379

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CWAFSA+  +E  +A++   L  LS Q
Sbjct: 380 VKNQGACGSCWAFSAIANIEGQYALKSKELLSLSEQ 415


>gi|390994427|gb|AFM37363.1| cathepsin F1 [Dictyocaulus viviparus]
          Length = 459

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 150/289 (51%), Gaps = 34/289 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H+KVY+S  D L+R   F  N++    +Q ++ GTAV+G+ +F DL+  + +++    + 
Sbjct: 164 HEKVYNSKHDTLKRFRVFKRNLKAIRSWQEKEEGTAVYGITQFSDLTPEEFKKIYLPYIW 223

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
              E I P+          D        N     + LPE+FDWR  G ++ VK QG C  
Sbjct: 224 D--EPIVPN-------RMVDLTAEGVHLN-----ETLPESFDWRDHGAVTDVKNQGFCGS 269

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFS  G +E    +    L  LS Q+LVDCD  + GC GG    A + I+  GG+ ++
Sbjct: 270 CWAFSTTGNIEGQWFLAKKKLVSLSEQELVDCDKVDDGCEGGLPSQAYKEIMRMGGLETE 329

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
            AYPY     E  C +   E F V + +   +P+ +EE MK W+  +GP+S+G+NAN L 
Sbjct: 330 SAYPYDGRGEE--CHINRTE-FAVYINDSVELPH-DEESMKAWLVKKGPISIGINANPLQ 385

Query: 440 YYSGGVID----------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           +Y  G+            LN  +    YG+  + PYWI+KNSWG  WGE
Sbjct: 386 FYRHGISHPWKFFCEPYMLNHGVLLVGYGSEKNKPYWIIKNSWGPKWGE 434



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 91/155 (58%), Gaps = 9/155 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GC GG    A + I+  GG+ ++ AYPY     E  C +   
Sbjct: 289 KLVSLSEQELVDCDKVDDGCEGGLPSQAYKEIMRMGGLETESAYPYDGRGEE--CHINRT 346

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           E F V + +   +P+ +EE MK W+  +GP+S+G+NAN L +Y  G+    +  C P   
Sbjct: 347 E-FAVYINDSVELPH-DEESMKAWLVKKGPISIGINANPLQFYRHGISHPWKFFCEPYML 404

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           NH +++VGYG E+ K     PYWI+KNSWG  WGE
Sbjct: 405 NHGVLLVGYGSEKNK-----PYWIIKNSWGPKWGE 434



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 14/155 (9%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F++FM  H+KVY+S  D L+R   F  N++    +Q ++ GTAV+ + +F DL+  + +
Sbjct: 156 QFVDFMGRHEKVYNSKHDTLKRFRVFKRNLKAIRSWQEKEEGTAVYGITQFSDLTPEEFK 215

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           ++    +    E I P+          D        N     + LPE+FDWR  G ++ V
Sbjct: 216 KIYLPYIWD--EPIVPN-------RMVDLTAEGVHLN-----ETLPESFDWRDHGAVTDV 261

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS  G +E    +    L  LS Q
Sbjct: 262 KNQGFCGSCWAFSTTGNIEGQWFLAKKKLVSLSEQ 296


>gi|195343593|ref|XP_002038380.1| GM10654 [Drosophila sechellia]
 gi|194133401|gb|EDW54917.1| GM10654 [Drosophila sechellia]
          Length = 615

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 152/292 (52%), Gaps = 42/292 (14%)

Query: 204 YSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLE 263
           Y S  +   R   F  N++  E+  + + G+A +G+ +F D++ S+ ++ TGL       
Sbjct: 320 YVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL------- 372

Query: 264 DIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAF 323
                    +  ++      +       HG+ LP+ FDWR +  +++VK QG C  CWAF
Sbjct: 373 ---------WQRDEAKATGGSAAVVPAYHGE-LPKEFDWRQKDAVTQVKNQGSCGSCWAF 422

Query: 324 SAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYP 383
           S  G +E ++A++   L E S Q+L+DCD ++  CNGG MD+A + I D GG+  +  YP
Sbjct: 423 SVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYP 482

Query: 384 YKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSG 443
           YKA +++  C         V+V  +  +P G E  M++W+ T GP+S+G+NAN + +Y G
Sbjct: 483 YKAKKNQ--CHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLTNGPISIGINANAMQFYRG 539

Query: 444 GVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWGEK 473
           GV    + L              YG S        +PYWIVKNSWG  WGE+
Sbjct: 540 GVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 591



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 100/164 (60%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  V   +L   + ++L+DCD ++  CNGG MD+A + I D GG+  +  YPYKA +++ 
Sbjct: 431 LYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQ- 489

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C         V+V  +  +P G E  M++W+ T GP+S+G+NAN + +Y GGV    + 
Sbjct: 490 -CHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLTNGPISIGINANAMQFYRGGVSHPWKA 547

Query: 610 LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H +++VGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 548 LCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 591



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F     + Y S  +   R   F  N++  E+    + G+A + + +F D++ S+ ++
Sbjct: 309 FYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKE 368

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TGL                +  ++      +       HG+ LP+ FDWR +  +++VK
Sbjct: 369 RTGL----------------WQRDEAKATGGSAAVVPAYHGE-LPKEFDWRQKDAVTQVK 411

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G +E ++A++   L E S Q
Sbjct: 412 NQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQ 445


>gi|324522685|gb|ADY48108.1| Cathepsin L, partial [Ascaris suum]
          Length = 308

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 165/293 (56%), Gaps = 35/293 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  +++ YS+ +++L+R   +  N+  A+ +Q+ + GTA++G  +F DL++++ +++   
Sbjct: 11  IGRYNRTYSNKKEMLKRFRIYKRNLRAAKIWQANEQGTAIYGETQFSDLTQAEFRKIM-- 68

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                       L   + + +   +M  F+   +   +D+PE+FDWR +  +++VK QG 
Sbjct: 69  ------------LPYKWETPKVPNKMANFKEFGIAQ-NDIPESFDWREKNAVTEVKNQGS 115

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G +E   AI+ + L  LS Q+LVDCD+ + GCNGG   +A + II  GG+
Sbjct: 116 CGSCWAFSVTGNIEGAWAIKTSKLVSLSEQELVDCDIIDQGCNGGLPSNAYREIIRMGGL 175

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPY     E+  L+ ++    V + +  ++P+ +EE+M  W+  +GP+S+G+NAN
Sbjct: 176 EAESDYPYDG-RGEKCHLMKKD--IAVYINDSLQLPH-DEEKMAAWLVAKGPISIGLNAN 231

Query: 437 GLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
            L +Y  G+            +D    + G    T  PYWI+KNSWG+ WGE+
Sbjct: 232 PLQFYRHGIAHPWRVFCSPKHLDHGVLIVGYGSETDKPYWIIKNSWGTKWGEE 284



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 100/161 (62%), Gaps = 9/161 (5%)

Query: 492 GVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
            +  SKL  L+ ++LVDCD+ + GCNGG   +A + II  GG+ ++  YPY     E+  
Sbjct: 133 AIKTSKLVSLSEQELVDCDIIDQGCNGGLPSNAYREIIRMGGLEAESDYPYDG-RGEKCH 191

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLC 611
           L+ ++    V + +  ++P+ +EE+M  W+  +GP+S+G+NAN L +Y  G+    +  C
Sbjct: 192 LMKKD--IAVYINDSLQLPH-DEEKMAAWLVAKGPISIGLNANPLQFYRHGIAHPWRVFC 248

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +PK  +H ++IVGYG E  K     PYWI+KNSWG+ WGE+
Sbjct: 249 SPKHLDHGVLIVGYGSETDK-----PYWIIKNSWGTKWGEE 284



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 15/151 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           F+  +++ YS+ +++L+R   +  N+  A+ +Q  + GTA++   +F DL+ ++ +++  
Sbjct: 10  FIGRYNRTYSNKKEMLKRFRIYKRNLRAAKIWQANEQGTAIYGETQFSDLTQAEFRKIM- 68

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                        L   + + +   +M  F+   +   +D+PE+FDWR +  +++VK QG
Sbjct: 69  -------------LPYKWETPKVPNKMANFKEFGIAQ-NDIPESFDWREKNAVTEVKNQG 114

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS  G +E   AI+ + L  LS Q
Sbjct: 115 SCGSCWAFSVTGNIEGAWAIKTSKLVSLSEQ 145


>gi|341878637|gb|EGT34572.1| hypothetical protein CAEBREN_13324 [Caenorhabditis brenneri]
          Length = 478

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 150/292 (51%), Gaps = 34/292 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H+K Y +  ++L+R   F  N +   + Q  + GTAV+G  KF D+        T +
Sbjct: 180 IDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTAVYGFTKFSDM--------TTM 231

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T+   Q   + P   +Q + E      +     +DLP++FDWR  G +++VK QG 
Sbjct: 232 EFKETMLPYQ--WEQPVPMDQANFEKEGVTISE----EDLPDSFDWREHGAVTQVKNQGS 285

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G +E    +    L  LS Q+LVDCD  + GCNGG   +A + II  GG+
Sbjct: 286 CGSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCDSVDQGCNGGLPSNAYKEIIRMGGL 345

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
             + AYPY     E   LV ++    V +     +P+ +E EM+KW+ T+GP+S+G+NAN
Sbjct: 346 EPEDAYPYDG-RGETCHLVRKD--IAVYINGSVELPH-DEVEMQKWLVTKGPISIGLNAN 401

Query: 437 GLFYYSGGVID----------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            L +Y  GV+           LN  +    YG     PYWIVKNSWG  WGE
Sbjct: 402 TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGE 453



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 67/156 (42%), Positives = 95/156 (60%), Gaps = 9/156 (5%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
            KL  L+ ++LVDCD  + GCNGG   +A + II  GG+  + AYPY     E   LV +
Sbjct: 307 KKLVSLSEQELVDCDSVDQGCNGGLPSNAYKEIIRMGGLEPEDAYPYDG-RGETCHLVRK 365

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
           +    V +     +P+ +E EM+KW+ T+GP+S+G+NAN L +Y  GV+   +  C P  
Sbjct: 366 D--IAVYINGSVELPH-DEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFM 422

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NH ++IVGYG++ +K     PYWIVKNSWG  WGE
Sbjct: 423 LNHGVLIVGYGKDGRK-----PYWIVKNSWGPTWGE 453



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 20/175 (11%)

Query: 26  LLESNIFQTRGYL--NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRED 83
           L ++ I + R Y+  NS    FL+F+  H+K Y +  ++L+R   F  N +   + Q+ +
Sbjct: 159 LRKAKIIKPRDYVIWNS----FLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNE 214

Query: 84  SGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 143
            GTAV+   KF D+        T +    T+   Q   + P   +Q + E      +   
Sbjct: 215 QGTAVYGFTKFSDM--------TTMEFKETMLPYQ--WEQPVPMDQANFEKEGVTISE-- 262

Query: 144 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             +DLP++FDWR  G +++VK QG C  CWAFS  G +E    +    L  LS Q
Sbjct: 263 --EDLPDSFDWREHGAVTQVKNQGSCGSCWAFSTTGNIEGAWFLAKKKLVSLSEQ 315


>gi|341878608|gb|EGT34543.1| hypothetical protein CAEBREN_26318 [Caenorhabditis brenneri]
          Length = 478

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 150/292 (51%), Gaps = 34/292 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H+K Y +  ++L+R   F  N +   + Q  + GTAV+G  KF D+        T +
Sbjct: 180 IDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTAVYGFTKFSDM--------TTM 231

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T+   Q   + P   +Q + E      +     +DLP++FDWR  G +++VK QG 
Sbjct: 232 EFKETMLPYQ--WEQPVPMDQANFEKEGVTISE----EDLPDSFDWREHGAVTQVKNQGS 285

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G +E    +    L  LS Q+LVDCD  + GCNGG   +A + II  GG+
Sbjct: 286 CGSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCDSVDQGCNGGLPSNAYKEIIRMGGL 345

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
             + AYPY     E   LV ++    V +     +P+ +E EM+KW+ T+GP+S+G+NAN
Sbjct: 346 EPEDAYPYDG-RGETCHLVRKD--IAVYINGSVELPH-DEVEMQKWLVTKGPISIGLNAN 401

Query: 437 GLFYYSGGVID----------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            L +Y  GV+           LN  +    YG     PYWIVKNSWG  WGE
Sbjct: 402 TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGE 453



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 95/155 (61%), Gaps = 9/155 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GCNGG   +A + II  GG+  + AYPY     E   LV ++
Sbjct: 308 KLVSLSEQELVDCDSVDQGCNGGLPSNAYKEIIRMGGLEPEDAYPYDG-RGETCHLVRKD 366

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
               V +     +P+ +E EM+KW+ T+GP+S+G+NAN L +Y  GV+   +  C P   
Sbjct: 367 --IAVYINGSVELPH-DEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFML 423

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           NH ++IVGYG++ +K     PYWIVKNSWG  WGE
Sbjct: 424 NHGVLIVGYGKDGRK-----PYWIVKNSWGPTWGE 453



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 20/175 (11%)

Query: 26  LLESNIFQTRGYL--NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRED 83
           L ++ I + R Y+  NS    FL+F+  H+K Y +  ++L+R   F  N +   + Q+ +
Sbjct: 159 LRKAKIIKPRDYVVWNS----FLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNE 214

Query: 84  SGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 143
            GTAV+   KF D+        T +    T+   Q   + P   +Q + E      +   
Sbjct: 215 QGTAVYGFTKFSDM--------TTMEFKETMLPYQ--WEQPVPMDQANFEKEGVTISE-- 262

Query: 144 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             +DLP++FDWR  G +++VK QG C  CWAFS  G +E    +    L  LS Q
Sbjct: 263 --EDLPDSFDWREHGAVTQVKNQGSCGSCWAFSTTGNIEGAWFLAKKKLVSLSEQ 315


>gi|344257451|gb|EGW13555.1| Cathepsin L1 [Cricetulus griseus]
          Length = 474

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 146/454 (32%), Positives = 208/454 (45%), Gaps = 62/454 (13%)

Query: 225 EDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMR 283
           EDY     G  +  +N F DL+ ++ +QL TG     T                  TEM 
Sbjct: 29  EDYTKGKHGFHL-EMNAFGDLTNTEFRQLMTGFQSMGT------------------TEMN 69

Query: 284 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTEL 343
            FQ   L    D+P++ DWR  G ++ VK+QG C  CWAFSAVG +      +   L  L
Sbjct: 70  VFQEPRL---GDVPKSVDWRKHGYVTPVKDQGSCGACWAFSAVGSLVGQMFWKTGKLVPL 126

Query: 344 SVQQLVDCDMSNG--GCNGGRMDDALQYIIDNGGV----------------VSDQAYPYK 385
           S Q LVDC  S+G  GC+GG M +A QY++DNGG+                V+   Y ++
Sbjct: 127 SEQNLVDCSWSHGNIGCHGGLMQNAFQYVMDNGGLDTTQTLRELGLDLKEKVAHSIYNFQ 186

Query: 386 ASESERGCLVGEE-EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGG 444
             E ER  L  E  +  ++  KEY +        M  +   R PL +             
Sbjct: 187 NEEVERRALWEENMKLIQLHNKEYHQGKNTFTMAMNAFGDQR-PLELAQTLTAFQSQEAK 245

Query: 445 VIDLNQRLYGTSIPYWIVKNSWGSDWGEKVEDKVGSSGNRTRDLELTGVL---PSKLSRL 501
             ++ Q      +P  +     G     K +    S    +    L G +     KL  L
Sbjct: 246 ETNIFQEPLLGDVPKSVDWRKHGYVTPVKDQGSCVSCWAFSAVGSLEGQMFRKTGKLVPL 305

Query: 502 ATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 559
           + + LVDC  S  N GC+GG    A QYI DNGG+ + ++YPY   E++ G    + +  
Sbjct: 306 SEQNLVDCSRSQHNNGCHGGLFTSAFQYIKDNGGLDTSESYPY---EAQDGPCRYDPKHS 362

Query: 560 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA---NGLFYYSGGVIDLNQRLCNPKAQ 616
              +  +  +P  EE  MK  VAT GP+S+G++    + LFY SG   D +   C     
Sbjct: 363 AANITGFVVVPSNEEALMKA-VATVGPISIGISVRLRSLLFYKSGFYYDPD---CYNHYP 418

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
           NH++++VGYGEE   DG    YW+VKNSWG +WG
Sbjct: 419 NHSVLLVGYGEE--SDGQK--YWLVKNSWGEEWG 448



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 209/493 (42%), Gaps = 121/493 (24%)

Query: 77  EDYQREDSGTAVFEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMR 135
           EDY +   G  + E+N F DL++++ +QL TG     T                  TEM 
Sbjct: 29  EDYTKGKHGFHL-EMNAFGDLTNTEFRQLMTGFQSMGT------------------TEMN 69

Query: 136 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV-------------- 181
            FQ   L    D+P++ DWR  G ++ VK+QG C  CWAFSAVG +              
Sbjct: 70  VFQEPRL---GDVPKSVDWRKHGYVTPVKDQGSCGACWAFSAVGSLVGQMFWKTGKLVPL 126

Query: 182 -----------------------EAMHAIQGN-------NLTELSVQHHDKVYSSV---- 207
                                   A   +  N        L EL +   +KV  S+    
Sbjct: 127 SEQNLVDCSWSHGNIGCHGGLMQNAFQYVMDNGGLDTTQTLRELGLDLKEKVAHSIYNFQ 186

Query: 208 -EDLLRR---HENF-VTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTL 262
            E++ RR    EN  +  +   E +Q ++  T    +N F D    +L Q        TL
Sbjct: 187 NEEVERRALWEENMKLIQLHNKEYHQGKN--TFTMAMNAFGDQRPLELAQ--------TL 236

Query: 263 EDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWA 322
              Q         +Q   E   FQ   L    D+P++ DWR  G ++ VK+QG C  CWA
Sbjct: 237 TAFQ---------SQEAKETNIFQEPLL---GDVPKSVDWRKHGYVTPVKDQGSCVSCWA 284

Query: 323 FSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQ 380
           FSAVG +E     +   L  LS Q LVDC  S  N GC+GG    A QYI DNGG+ + +
Sbjct: 285 FSAVGSLEGQMFRKTGKLVPLSEQNLVDCSRSQHNNGCHGGLFTSAFQYIKDNGGLDTSE 344

Query: 381 AYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA---NG 437
           +YPY   E++ G    + +     +  +  +P  EE  MK  VAT GP+S+G++    + 
Sbjct: 345 SYPY---EAQDGPCRYDPKHSAANITGFVVVPSNEEALMKA-VATVGPISIGISVRLRSL 400

Query: 438 LFYYSGGVID-------LNQRL----YGTSI---PYWIVKNSWGSDWGEKVEDKVGSSGN 483
           LFY SG   D        N  +    YG       YW+VKNSWG +WG     K+    N
Sbjct: 401 LFYKSGFYYDPDCYNHYPNHSVLLVGYGEESDGQKYWLVKNSWGEEWGMDGYIKIAKDRN 460

Query: 484 RTRDLELTGVLPS 496
               +      P+
Sbjct: 461 NHCSIATIAAYPT 473


>gi|194746631|ref|XP_001955780.1| GF16067 [Drosophila ananassae]
 gi|190628817|gb|EDV44341.1| GF16067 [Drosophila ananassae]
          Length = 620

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 155/294 (52%), Gaps = 46/294 (15%)

Query: 204 YSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL--NLDST 261
           Y S  +   R   F  N++  E+  + + G+A +G+ +F D++ ++ ++ TGL    ++ 
Sbjct: 325 YVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSTEYKERTGLWQRDEAK 384

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
                P++   +S                    +LP+ FDWR++  ++ VK QG+C  CW
Sbjct: 385 ATGGSPAVVPAYSG-------------------ELPKEFDWRSKNAVTGVKNQGQCGSCW 425

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQA 381
           AFS  G +E ++A++   L E S Q+L+DCD ++  CNGG MD+A + I D GG+  +  
Sbjct: 426 AFSVTGNIEGLYALKYGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAE 485

Query: 382 YPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYY 441
           YPY+A + +  C   +     V+VK++  +P G E  M++W+ + GP+S+G+NAN + +Y
Sbjct: 486 YPYEAKKKQ--CHFNKTMSH-VQVKDFVDLPKGNETAMQEWLVSNGPISIGINANAMQFY 542

Query: 442 SGGVIDLNQRL----------------------YGTSIPYWIVKNSWGSDWGEK 473
            GGV    + L                      Y  ++PYWIVKNSWG  WGE+
Sbjct: 543 RGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNYHKTLPYWIVKNSWGPRWGEQ 596



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 100/157 (63%), Gaps = 4/157 (2%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L   + ++L+DCD ++  CNGG MD+A + I D GG+  +  YPY+A + +  C   + 
Sbjct: 443 ELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYEAKKKQ--CHFNKT 500

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
               V+VK++  +P G E  M++W+ + GP+S+G+NAN + +Y GGV    + LC+ K  
Sbjct: 501 MSH-VQVKDFVDLPKGNETAMQEWLVSNGPISIGINANAMQFYRGGVSHPWKALCSKKNL 559

Query: 617 NHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           +H +++VGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 560 DHGVLVVGYGVSDYPNYHKTLPYWIVKNSWGPRWGEQ 596



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 21/156 (13%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F     + Y S  +   R   F  N++  E+    + G+A + + +F D++ ++ ++
Sbjct: 314 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSTEYKE 373

Query: 105 LTGL--NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            TGL    ++      P++   +S                    +LP+ FDWR++  ++ 
Sbjct: 374 RTGLWQRDEAKATGGSPAVVPAYSG-------------------ELPKEFDWRSKNAVTG 414

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG+C  CWAFS  G +E ++A++   L E S Q
Sbjct: 415 VKNQGQCGSCWAFSVTGNIEGLYALKYGELKEFSEQ 450


>gi|24644155|ref|NP_730901.1| CG12163, isoform A [Drosophila melanogaster]
 gi|32699625|sp|Q9VN93.2|CPR1_DROME RecName: Full=Putative cysteine proteinase CG12163; Flags:
           Precursor
 gi|23170427|gb|AAF52055.2| CG12163, isoform A [Drosophila melanogaster]
 gi|27819876|gb|AAO24986.1| LP08529p [Drosophila melanogaster]
          Length = 614

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 42/292 (14%)

Query: 204 YSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLE 263
           Y S  +   R   F  N++  E+  + + G+A +G+ +F D++ S+ ++ TGL       
Sbjct: 319 YVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL------- 371

Query: 264 DIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAF 323
                    +  ++      +       HG+ LP+ FDWR +  +++VK QG C  CWAF
Sbjct: 372 ---------WQRDEAKATGGSAAVVPAYHGE-LPKEFDWRQKDAVTQVKNQGSCGSCWAF 421

Query: 324 SAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYP 383
           S  G +E ++A++   L E S Q+L+DCD ++  CNGG MD+A + I D GG+  +  YP
Sbjct: 422 SVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYP 481

Query: 384 YKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSG 443
           YKA +++  C         V+V  +  +P G E  M++W+   GP+S+G+NAN + +Y G
Sbjct: 482 YKAKKNQ--CHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRG 538

Query: 444 GVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWGEK 473
           GV    + L              YG S        +PYWIVKNSWG  WGE+
Sbjct: 539 GVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 590



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 99/164 (60%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  V   +L   + ++L+DCD ++  CNGG MD+A + I D GG+  +  YPYKA +++ 
Sbjct: 430 LYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQ- 488

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C         V+V  +  +P G E  M++W+   GP+S+G+NAN + +Y GGV    + 
Sbjct: 489 -CHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKA 546

Query: 610 LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H +++VGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 547 LCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 590



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F     + Y S  +   R   F  N++  E+    + G+A + + +F D++ S+ ++
Sbjct: 308 FYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKE 367

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TGL                +  ++      +       HG+ LP+ FDWR +  +++VK
Sbjct: 368 RTGL----------------WQRDEAKATGGSAAVVPAYHGE-LPKEFDWRQKDAVTQVK 410

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G +E ++A++   L E S Q
Sbjct: 411 NQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQ 444


>gi|224056176|ref|XP_002298740.1| predicted protein [Populus trichocarpa]
 gi|222845998|gb|EEE83545.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 173/330 (52%), Gaps = 42/330 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           + E+ +  H + Y+++ +  RR E F  N++  +++ S  + +   G+NKF DLS  + +
Sbjct: 24  IYEMWLVKHGRAYNALGEKERRFEIFKDNLKFIDEHNSVGNPSYKLGLNKFADLSNDEYR 83

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
            +    L + ++     L  P S                + GDDLPE  DWR +G ++ V
Sbjct: 84  SVY---LGTRMDGKGRLLGGPKSERYL-----------FKEGDDLPETVDWREKGAVAPV 129

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYI 370
           K+QG+C  CWAFS VG VE ++ I   +LT LS Q+LVDCD + N GCNGG MD A  +I
Sbjct: 130 KDQGQCGSCWAFSTVGAVEGINQIVTGNLTSLSEQELVDCDKTYNLGCNGGLMDYAFDFI 189

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           I+NGG+ +++ YPYKA +S   C    +    V +  Y  +P  +E+ +KK VA + P+S
Sbjct: 190 IENGGIDTEEDYPYKAIDSM--CDPNRKNARVVTIDGYEDVPQNDEKSLKKAVANQ-PVS 246

Query: 431 VGMNANGL---FYYSG------------GVIDLNQRLYGT--SIPYWIVKNSWGSDWGE- 472
           V + A G     Y SG            GV+ +    YGT   + YWIV+NSWG  WGE 
Sbjct: 247 VAIEAGGRGFQLYQSGVFTGSCGTQLDHGVVTVG---YGTEHGVDYWIVRNSWGPAWGEN 303

Query: 473 ---KVEDKVGSSGNRTRDLELTGVLPSKLS 499
              ++E  V S+      + +    P+K S
Sbjct: 304 GYIRMERDVASTETGKCGIAMEASYPTKKS 333



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++LVDCD + N GCNGG MD A  +II+NGG+ +++ YPYKA +S   C
Sbjct: 153 IVTGNLTSLSEQELVDCDKTYNLGCNGGLMDYAFDFIIENGGIDTEEDYPYKAIDSM--C 210

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P  +E+ +KK VA + P+SV + A G  +  Y  GV   +  
Sbjct: 211 DPNRKNARVVTIDGYEDVPQNDEKSLKKAVANQ-PVSVAIEAGGRGFQLYQSGVFTGS-- 267

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C  +  +H ++ VGYG E   D     YWIV+NSWG  WGE
Sbjct: 268 -CGTQL-DHGVVTVGYGTEHGVD-----YWIVRNSWGPAWGE 302



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 17/161 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H + Y+++ +  RR E F  N++  +++    + +    +NKF DLS+ + + +  
Sbjct: 28  WLVKHGRAYNALGEKERRFEIFKDNLKFIDEHNSVGNPSYKLGLNKFADLSNDEYRSVY- 86

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
             L + ++     L  P S                + GDDLPE  DWR +G ++ VK+QG
Sbjct: 87  --LGTRMDGKGRLLGGPKSERYL-----------FKEGDDLPETVDWREKGAVAPVKDQG 133

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH---HDKVYS 205
           +C  CWAFS VG VE ++ I   NLT LS Q     DK Y+
Sbjct: 134 QCGSCWAFSTVGAVEGINQIVTGNLTSLSEQELVDCDKTYN 174


>gi|24644153|ref|NP_649521.1| CG12163, isoform B [Drosophila melanogaster]
 gi|23170426|gb|AAN13266.1| CG12163, isoform B [Drosophila melanogaster]
 gi|378548248|gb|AFC17498.1| FI18603p1 [Drosophila melanogaster]
          Length = 475

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 152/294 (51%), Gaps = 42/294 (14%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           + Y S  +   R   F  N++  E+  + + G+A +G+ +F D++ S+ ++ TGL     
Sbjct: 178 RRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL----- 232

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
                      +  ++      +       HG+ LP+ FDWR +  +++VK QG C  CW
Sbjct: 233 -----------WQRDEAKATGGSAAVVPAYHGE-LPKEFDWRQKDAVTQVKNQGSCGSCW 280

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQA 381
           AFS  G +E ++A++   L E S Q+L+DCD ++  CNGG MD+A + I D GG+  +  
Sbjct: 281 AFSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAE 340

Query: 382 YPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYY 441
           YPYKA +++  C         V+V  +  +P G E  M++W+   GP+S+G+NAN + +Y
Sbjct: 341 YPYKAKKNQ--CHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFY 397

Query: 442 SGGVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWGEK 473
            GGV    + L              YG S        +PYWIVKNSWG  WGE+
Sbjct: 398 RGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 451



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 99/164 (60%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  V   +L   + ++L+DCD ++  CNGG MD+A + I D GG+  +  YPYKA +++ 
Sbjct: 291 LYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQ- 349

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C         V+V  +  +P G E  M++W+   GP+S+G+NAN + +Y GGV    + 
Sbjct: 350 -CHFNRTLSH-VQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKA 407

Query: 610 LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H +++VGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 408 LCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 451



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F     + Y S  +   R   F  N++  E+    + G+A + + +F D++ S+ ++
Sbjct: 169 FYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKE 228

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TGL                +  ++      +       HG+ LP+ FDWR +  +++VK
Sbjct: 229 RTGL----------------WQRDEAKATGGSAAVVPAYHGE-LPKEFDWRQKDAVTQVK 271

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G +E ++A++   L E S Q
Sbjct: 272 NQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQ 305


>gi|311247276|ref|XP_003122571.1| PREDICTED: cathepsin W-like [Sus scrofa]
          Length = 367

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 159/303 (52%), Gaps = 49/303 (16%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           +++ YS+  +  RR + F  N+ KA+  Q ED GTA FGV  F DL+E +  QL G +  
Sbjct: 49  YNRSYSNPAEHARRLDIFAQNLAKAQRLQEEDLGTAEFGVTPFSDLTEEEFGQLHGHHWG 108

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE-GVISKVKEQGKCA 318
           +      PS+     S ++              G+ +P++ DWR + GVIS +K Q  C 
Sbjct: 109 A---GKAPSMGIKVGSEES--------------GETVPQSCDWRKKPGVISAIKHQKDCN 151

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
           CCWA +AV  VEA  AI+ +   +LSVQQ++DCD    GCNGG + DA   +++  G+ S
Sbjct: 152 CCWAMAAVDNVEAQWAIKYHQAVQLSVQQVLDCDRCGNGCNGGFVWDAFLTVLNTSGLAS 211

Query: 379 DQAYPYKASESERGCLVGEEEGFKVK-VKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +Q YPYK +     CL  +    KV  ++++  + +  E+ + +++AT GP++V +NA  
Sbjct: 212 EQDYPYKGTVKTHRCLAKQHR--KVAWIQDFLMLQFC-EQSIARYLATEGPITVTINAGL 268

Query: 438 LFYYSGGVID----------LNQRLY-----------------GTSIPYWIVKNSWGSDW 470
           L  Y  GVI           +N  +                  G SIPYWI+KNSWG DW
Sbjct: 269 LQQYKRGVIRATPATCDPHLVNHSVLLVGFGKSKSVEGRRPRPGHSIPYWILKNSWGPDW 328

Query: 471 GEK 473
           GE+
Sbjct: 329 GEE 331



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 97/160 (60%), Gaps = 10/160 (6%)

Query: 500 RLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 559
           +L+ ++++DCD    GCNGG + DA   +++  G+ S+Q YPYK +     CL  +    
Sbjct: 175 QLSVQQVLDCDRCGNGCNGGFVWDAFLTVLNTSGLASEQDYPYKGTVKTHRCLAKQHR-- 232

Query: 560 KVK-VKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNH 618
           KV  ++++  + +  E+ + +++AT GP++V +NA  L  Y  GVI      C+P   NH
Sbjct: 233 KVAWIQDFLMLQFC-EQSIARYLATEGPITVTINAGLLQQYKRGVIRATPATCDPHLVNH 291

Query: 619 ALIIVGYGEEE------KKDGTSIPYWIVKNSWGSDWGEK 652
           ++++VG+G+ +       + G SIPYWI+KNSWG DWGE+
Sbjct: 292 SVLLVGFGKSKSVEGRRPRPGHSIPYWILKNSWGPDWGEE 331



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 18/155 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F   +++ YS+  +  RR + F  N+ KA+  Q ED GTA F V  F DL++ +  Q
Sbjct: 42  FTLFQIQYNRSYSNPAEHARRLDIFAQNLAKAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE-GVISKV 163
           L G +  +      PS+     S ++              G+ +P++ DWR + GVIS +
Sbjct: 102 LHGHHWGA---GKAPSMGIKVGSEES--------------GETVPQSCDWRKKPGVISAI 144

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K Q  C CCWA +AV  VEA  AI+ +   +LSVQ
Sbjct: 145 KHQKDCNCCWAMAAVDNVEAQWAIKYHQAVQLSVQ 179


>gi|116786779|gb|ABK24233.1| unknown [Picea sitchensis]
          Length = 463

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 155/301 (51%), Gaps = 41/301 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L EL +  H K Y+ + +   R   F  N      + ++ + +   G+N+F DLS  + +
Sbjct: 43  LYELWLAQHKKAYNGLGEKQNRFSVFKDNFLYIHQHNNQGNPSYKLGLNQFADLSHEEFK 102

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH----GDDLPEAFDWRAEGV 307
                              A +   + DT+ R     S R+    G+DLPE+ DWR +G 
Sbjct: 103 -------------------ATYLGAKLDTKKRLSNSPSPRYQYSDGEDLPESIDWREKGA 143

Query: 308 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDA 366
           ++ VK+QG C  CWAFS V  VE ++ I   +LT LS Q+LVDCD S N GCNGG MD A
Sbjct: 144 VTAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNGGLMDYA 203

Query: 367 LQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATR 426
            Q+II+NGG+ S+  YPYKA++    C    +    V + +Y  +P  +E+ +KK  A +
Sbjct: 204 FQFIINNGGLDSEDDYPYKANDGS--CDAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQ 261

Query: 427 GPLSVGMNANG--LFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGE 472
            P+SV + A+G    +Y  GV        +D    L G    +   YWIVKNSWG  WGE
Sbjct: 262 -PISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGTDYWIVKNSWGKSWGE 320

Query: 473 K 473
           K
Sbjct: 321 K 321



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 120/230 (52%), Gaps = 31/230 (13%)

Query: 441 YSGGVIDLNQRLYGTSIPYWIVKNSW----GSDWGEK-----VEDKVGSSGN-----RTR 486
           Y G  +D  +RL  +  P +   +        DW EK     V+D+ GS G+        
Sbjct: 105 YLGAKLDTKKRLSNSPSPRYQYSDGEDLPESIDWREKGAVTAVKDQ-GSCGSCWAFSTVA 163

Query: 487 DLE-LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKA 544
            +E +  ++   L+ L+ ++LVDCD S N GCNGG MD A Q+II+NGG+ S+  YPYKA
Sbjct: 164 AVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNGGLMDYAFQFIINNGGLDSEDDYPYKA 223

Query: 545 SESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGG 602
           ++    C    +    V + +Y  +P  +E+ +KK  A + P+SV + A+G    +Y  G
Sbjct: 224 NDGS--CDAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQ-PISVAIEASGRAFQFYESG 280

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           V       C  +  +H + +VGYG E   D     YWIVKNSWG  WGEK
Sbjct: 281 VF---TSTCGTQL-DHGVTLVGYGSESGTD-----YWIVKNSWGKSWGEK 321



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 23/155 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K Y+ + +   R   F  N      +  + + +    +N+F DLS  + +    
Sbjct: 47  WLAQHKKAYNGLGEKQNRFSVFKDNFLYIHQHNNQGNPSYKLGLNQFADLSHEEFK---- 102

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH----GDDLPEAFDWRAEGVISKV 163
                          A +   + DT+ R     S R+    G+DLPE+ DWR +G ++ V
Sbjct: 103 ---------------ATYLGAKLDTKKRLSNSPSPRYQYSDGEDLPESIDWREKGAVTAV 147

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 148 KDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 182


>gi|390339264|ref|XP_791714.3| PREDICTED: putative cysteine proteinase CG12163-like
           [Strongylocentrotus purpuratus]
          Length = 453

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/278 (36%), Positives = 145/278 (52%), Gaps = 44/278 (15%)

Query: 213 RHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSL-QA 271
           R+  FV N+   E +   + GTA +G  KF D++E++ ++L    L  T    Q ++ Q 
Sbjct: 179 RYSVFVQNMLTVEMFNQFEQGTAKYGPTKFADMTEAEFRKLQSGPLKKTGIKKQAAIPQG 238

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
           P                       +PE +DWR  G ++ VK QG C  CWAFSA+G +E 
Sbjct: 239 P-----------------------VPEEYDWRTHGAVTPVKNQGMCGSCWAFSAIGNMEG 275

Query: 332 MHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 391
              I+   L  LS Q+LVDCD  +GGC GG M DA + II  GG +S++ YPY+  E+E+
Sbjct: 276 QWQIKKGELISLSEQELVDCDKVDGGCEGGEMSDAYEAIIKLGGAMSEEKYPYRG-ENEK 334

Query: 392 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV------ 445
            C     +  +VK+  Y  I    E EM  W+A  GP+S+G+NA  + +Y GG+      
Sbjct: 335 -CKFNMTD-VRVKINGYVNIS-KNETEMAGWLAAHGPISIGINALMMQFYFGGIAHPWKI 391

Query: 446 ------IDLNQRLYGTSI----PYWIVKNSWGSDWGEK 473
                 +D    + G S+    PYWIVKNSWG DWGE+
Sbjct: 392 FCSPDSLDHGVLIVGYSVKDGEPYWIVKNSWGKDWGEE 429



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/156 (43%), Positives = 97/156 (62%), Gaps = 9/156 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCD  +GGC GG M DA + II  GG +S++ YPY+  E+E+ C     
Sbjct: 283 ELISLSEQELVDCDKVDGGCEGGEMSDAYEAIIKLGGAMSEEKYPYRG-ENEK-CKFNMT 340

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           +  +VK+  Y  I    E EM  W+A  GP+S+G+NA  + +Y GG+    +  C+P + 
Sbjct: 341 D-VRVKINGYVNIS-KNETEMAGWLAAHGPISIGINALMMQFYFGGIAHPWKIFCSPDSL 398

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +H ++IVGY     KDG   PYWIVKNSWG DWGE+
Sbjct: 399 DHGVLIVGY---SVKDGE--PYWIVKNSWGKDWGEE 429



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 24/135 (17%)

Query: 65  RHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSL-QA 123
           R+  FV N+   E + + + GTA +   KF D+++++ ++L    L  T    Q ++ Q 
Sbjct: 179 RYSVFVQNMLTVEMFNQFEQGTAKYGPTKFADMTEAEFRKLQSGPLKKTGIKKQAAIPQG 238

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
           P                       +PE +DWR  G ++ VK QG C  CWAFSA+G +E 
Sbjct: 239 P-----------------------VPEEYDWRTHGAVTPVKNQGMCGSCWAFSAIGNMEG 275

Query: 184 MHAIQGNNLTELSVQ 198
              I+   L  LS Q
Sbjct: 276 QWQIKKGELISLSEQ 290


>gi|268554660|ref|XP_002635317.1| C. briggsae CBR-TAG-196 protein [Caenorhabditis briggsae]
          Length = 477

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 33/292 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H+K YS+  ++L+R   F  N +   + Q  + G+AV+G  KF D++  + +Q    
Sbjct: 178 IDRHEKRYSNKREVLKRFRTFKKNAKVIRELQKNEQGSAVYGFTKFSDMTTMEFKQ---- 233

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T+   Q   Q  +   + D E      +     DDLP++FDWR  G +++VK QG 
Sbjct: 234 ----TMLPYQWE-QPVYPMAEADFEKEGVTISE----DDLPDSFDWRDHGAVTQVKNQGN 284

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G VE    +    L  LS Q+LVDCD  + GCNGG   +A + I+  GG+
Sbjct: 285 CGSCWAFSTTGNVEGAWYLAKKKLVSLSEQELVDCDSVDQGCNGGLPSNAYKEIMRMGGL 344

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
             + AYPY   + E   +V ++    V +     +P+ +E +++KW+ T+GP+S+G+NAN
Sbjct: 345 EPEDAYPYDG-KGETCHIVRKD--IAVYINGSVELPH-DEVKIQKWLVTKGPISIGLNAN 400

Query: 437 GLFYYSGGVID----------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            L +Y  GV+           LN  +    YG     PYWIVKNSWG  WGE
Sbjct: 401 TLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRKPYWIVKNSWGPTWGE 452



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 9/155 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GCNGG   +A + I+  GG+  + AYPY   + E   +V ++
Sbjct: 307 KLVSLSEQELVDCDSVDQGCNGGLPSNAYKEIMRMGGLEPEDAYPYDG-KGETCHIVRKD 365

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
               V +     +P+ +E +++KW+ T+GP+S+G+NAN L +Y  GV+   +  C P   
Sbjct: 366 --IAVYINGSVELPH-DEVKIQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFML 422

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           NH ++IVGYG++ +K     PYWIVKNSWG  WGE
Sbjct: 423 NHGVLIVGYGKDGRK-----PYWIVKNSWGPTWGE 452



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 19/175 (10%)

Query: 26  LLESNIFQTRGYL--NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRED 83
           L ++ I + R Y+  NS    FL+F+  H+K YS+  ++L+R   F  N +   + Q+ +
Sbjct: 157 LRKAKIIRPRDYVIWNS----FLDFIDRHEKRYSNKREVLKRFRTFKKNAKVIRELQKNE 212

Query: 84  SGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 143
            G+AV+   KF D++  + +Q        T+   Q   Q  +   + D E      +   
Sbjct: 213 QGSAVYGFTKFSDMTTMEFKQ--------TMLPYQWE-QPVYPMAEADFEKEGVTISE-- 261

Query: 144 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             DDLP++FDWR  G +++VK QG C  CWAFS  G VE    +    L  LS Q
Sbjct: 262 --DDLPDSFDWRDHGAVTQVKNQGNCGSCWAFSTTGNVEGAWYLAKKKLVSLSEQ 314


>gi|405977658|gb|EKC42097.1| Cathepsin F [Crassostrea gigas]
          Length = 715

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/288 (35%), Positives = 148/288 (51%), Gaps = 39/288 (13%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           ++Y S ++   R + F  N+ KA+  Q  + GTAV+GV KF D+SES+ +Q  G   D  
Sbjct: 427 RLYMSKQEEKTRFKIFCENMRKAKKLQDVEKGTAVYGVTKFADMSESEFKQYVGKVWDQ- 485

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
                       ++N+   + +  + NSL      P +FDWR  G +++VK QG C  CW
Sbjct: 486 ------------NANKGMKKAKIPEMNSL------PNSFDWREHGAVTEVKNQGSCGSCW 527

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQA 381
           AFS  G +E   AI    L  LS Q+LVDCD  + GCNGG    A + II  GG+ ++  
Sbjct: 528 AFSTTGNIEGQWAISKKKLVSLSEQELVDCDKVDEGCNGGLPSQAYKEIIRLGGLETETD 587

Query: 382 YPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYY 441
           Y Y+    +  C + ++   +VK+     I    E EM  W+   GP+S+G+NA  + +Y
Sbjct: 588 YKYRGHNEK--CSM-DKSKIRVKINGSVSIS-SNETEMAAWLVKNGPISIGINAFAMQFY 643

Query: 442 SGGV------------IDLNQRLYGTSI----PYWIVKNSWGSDWGEK 473
            GG+            +D    + G  +    PYWI+KNSWG DWGEK
Sbjct: 644 MGGISHPWKIFCNPKELDHGVLIVGYGVKGSKPYWIIKNSWGPDWGEK 691



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 90/156 (57%), Gaps = 9/156 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GCNGG    A + II  GG+ ++  Y Y+    +  C + ++
Sbjct: 545 KLVSLSEQELVDCDKVDEGCNGGLPSQAYKEIIRLGGLETETDYKYRGHNEK--CSM-DK 601

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
              +VK+     I    E EM  W+   GP+S+G+NA  + +Y GG+    +  CNPK  
Sbjct: 602 SKIRVKINGSVSIS-SNETEMAAWLVKNGPISIGINAFAMQFYMGGISHPWKIFCNPKEL 660

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +H ++IVGYG +  K     PYWI+KNSWG DWGEK
Sbjct: 661 DHGVLIVGYGVKGSK-----PYWIIKNSWGPDWGEK 691



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 19/154 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F     ++Y S ++   R + F  N+ KA+  Q  + GTAV+ V KF D+S+S+ +Q
Sbjct: 418 FQQFQAAFKRLYMSKQEEKTRFKIFCENMRKAKKLQDVEKGTAVYGVTKFADMSESEFKQ 477

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
             G   D              ++N+   + +  + NSL      P +FDWR  G +++VK
Sbjct: 478 YVGKVWDQ-------------NANKGMKKAKIPEMNSL------PNSFDWREHGAVTEVK 518

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G +E   AI    L  LS Q
Sbjct: 519 NQGSCGSCWAFSTTGNIEGQWAISKKKLVSLSEQ 552


>gi|148907299|gb|ABR16787.1| unknown [Picea sitchensis]
          Length = 372

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/294 (36%), Positives = 155/294 (52%), Gaps = 31/294 (10%)

Query: 196 SVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG 255
           ++QH        ++  RR E F  NV+  +    +D G    G+NKF DLS    ++   
Sbjct: 49  ALQHRSTRSLDSDEHARRFEIFKENVKHIDSVNKKD-GPYKLGLNKFADLSN---EEFKA 104

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF-NSLRHGDDLPEAFDWRAEGVISKVKEQ 314
           +++ + +E    SL+          E  +F + NS R    LP + DWR +G ++ VK Q
Sbjct: 105 MHMTTKMEK-HKSLRG-----DRGVESGSFMYQNSKR----LPASIDWRKKGAVTPVKNQ 154

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNG 374
           G+C  CWAFS +  VE ++ I+   L  LS QQLVDC   N GCNGG MD+A QYIIDNG
Sbjct: 155 GQCGSCWAFSTIASVEGINYIKTGKLVSLSEQQLVDCSKENAGCNGGLMDNAFQYIIDNG 214

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+V++  YPY A   E      E +     +  +  +P   E  +KK VA + P+S+ + 
Sbjct: 215 GIVTEDEYPYTAEAGECSTTKIESKSIATIIDGFEDVPANNEGALKKAVAHQ-PVSIAIE 273

Query: 435 ANG--LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
           A+G    +YS GV       +L+  +    YG S   I YWIV+NSWG +WGE+
Sbjct: 274 ASGHDFQFYSTGVFTGKCGTELDHGVVVVGYGKSPEGINYWIVRNSWGPEWGEQ 327



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 90/158 (56%), Gaps = 11/158 (6%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDC   N GCNGG MD+A QYIIDNGG+V++  YPY A   E      E 
Sbjct: 179 KLVSLSEQQLVDCSKENAGCNGGLMDNAFQYIIDNGGIVTEDEYPYTAEAGECSTTKIES 238

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCNPK 614
           +     +  +  +P   E  +KK VA + P+S+ + A+G    +YS GV       C  +
Sbjct: 239 KSIATIIDGFEDVPANNEGALKKAVAHQ-PVSIAIEASGHDFQFYSTGVFTGK---CGTE 294

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H +++VGYG    K    I YWIV+NSWG +WGE+
Sbjct: 295 L-DHGVVVVGYG----KSPEGINYWIVRNSWGPEWGEQ 327



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 15/137 (10%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           RR E F  NV+  +   ++D G     +NKF DLS+   ++   +++ + +E    SL+ 
Sbjct: 65  RRFEIFKENVKHIDSVNKKD-GPYKLGLNKFADLSN---EEFKAMHMTTKMEK-HKSLRG 119

Query: 124 PFSSNQTDTEMRAFQF-NSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVE 182
                    E  +F + NS R    LP + DWR +G ++ VK QG+C  CWAFS +  VE
Sbjct: 120 -----DRGVESGSFMYQNSKR----LPASIDWRKKGAVTPVKNQGQCGSCWAFSTIASVE 170

Query: 183 AMHAIQGNNLTELSVQH 199
            ++ I+   L  LS Q 
Sbjct: 171 GINYIKTGKLVSLSEQQ 187


>gi|1208549|gb|AAC49455.1| Pseudotzain [Pseudotsuga menziesii]
          Length = 454

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/301 (35%), Positives = 156/301 (51%), Gaps = 41/301 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L EL +  H K Y+ +++  ++   F  N      + ++ + +   G+N+F DLS  + +
Sbjct: 43  LYELWLAQHKKAYNGLDEKQKKFSVFKDNFLYIHQHNNQGNPSYKLGLNQFADLSHEEFK 102

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH----GDDLPEAFDWRAEGV 307
                              A +   + D + R  +  S R+    G+DLPE+ DWR +G 
Sbjct: 103 -------------------AAYLGTKLDAKKRLSRSPSPRYQYSVGEDLPESIDWREKGA 143

Query: 308 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDA 366
           ++ VK QG C  CWAFS V  VE ++ I   +LT LS Q+LVDCD S N GCNGG MD A
Sbjct: 144 VTAVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNGGLMDYA 203

Query: 367 LQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATR 426
            Q+II NGG+ S+  YPYKA+     C    +    V + +Y  +P  +E+ +KK  A +
Sbjct: 204 FQFIISNGGLDSEDDYPYKANNGS--CDAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQ 261

Query: 427 GPLSVGMNANG--LFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGE 472
            P+SV + A+G    +Y  GV        +D    L G    + I YW+VKNSWG+ WGE
Sbjct: 262 -PISVAIEASGRAFQFYESGVFTSNCGTQLDHGVTLVGYGSESGIDYWLVKNSWGNSWGE 320

Query: 473 K 473
           K
Sbjct: 321 K 321



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 95/163 (58%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++LVDCD S N GCNGG MD A Q+II NGG+ S+  YPYKA+     C
Sbjct: 171 IVTGNLTSLSEQELVDCDTSYNQGCNGGLMDYAFQFIISNGGLDSEDDYPYKANNGS--C 228

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
               +    V + +Y  +P  +E+ +KK  A + P+SV + A+G    +Y  GV   N  
Sbjct: 229 DAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQ-PISVAIEASGRAFQFYESGVFTSN-- 285

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H + +VGYG E     + I YW+VKNSWG+ WGEK
Sbjct: 286 -CGTQL-DHGVTLVGYGSE-----SGIDYWLVKNSWGNSWGEK 321



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 23/155 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K Y+ +++  ++   F  N      +  + + +    +N+F DLS  + +    
Sbjct: 47  WLAQHKKAYNGLDEKQKKFSVFKDNFLYIHQHNNQGNPSYKLGLNQFADLSHEEFK---- 102

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH----GDDLPEAFDWRAEGVISKV 163
                          A +   + D + R  +  S R+    G+DLPE+ DWR +G ++ V
Sbjct: 103 ---------------AAYLGTKLDAKKRLSRSPSPRYQYSVGEDLPESIDWREKGAVTAV 147

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 148 KNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 182


>gi|198453932|ref|XP_002137768.1| GA27408, isoform A [Drosophila pseudoobscura pseudoobscura]
 gi|198132577|gb|EDY68326.1| GA27408, isoform A [Drosophila pseudoobscura pseudoobscura]
          Length = 629

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 152/294 (51%), Gaps = 42/294 (14%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           + Y +  +   R   F  N++  E+  + + G+A +G+ +F D++ ++ ++ TGL     
Sbjct: 332 RRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKERTGL---WQ 388

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            ++ +P+  AP      + E               P+ FDWR +  ++ VK QG C  CW
Sbjct: 389 RDEQKPTGGAPAVVPAYEGE--------------FPKEFDWRQKNAVTPVKNQGSCGSCW 434

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQA 381
           AFS  G +E ++A++   L E S Q+L+DCD ++  CNGG MD+A + I D GG+  +  
Sbjct: 435 AFSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAE 494

Query: 382 YPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYY 441
           YPY+A + +  C         V+V  +  +P G E  M++W+ T GP+S+G+NAN + +Y
Sbjct: 495 YPYEAKKQQ--CHFNRTLS-HVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFY 551

Query: 442 SGGVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWGEK 473
            GGV    + L              YG S        +PYWIVKNSWG  WGE+
Sbjct: 552 RGGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 605



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  V   +L   + ++L+DCD ++  CNGG MD+A + I D GG+  +  YPY+A + + 
Sbjct: 445 LYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYEAKKQQ- 503

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C         V+V  +  +P G E  M++W+ T GP+S+G+NAN + +Y GGV    + 
Sbjct: 504 -CHFNRTLS-HVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFYRGGVSHPWKA 561

Query: 610 LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H ++IVGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 562 LCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 605



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F     + Y +  +   R   F  N++  E+    + G+A + + +F D++ ++ ++
Sbjct: 323 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 382

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TGL      ++ +P+  AP      + E               P+ FDWR +  ++ VK
Sbjct: 383 RTGL---WQRDEQKPTGGAPAVVPAYEGE--------------FPKEFDWRQKNAVTPVK 425

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G +E ++A++   L E S Q
Sbjct: 426 NQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQ 459


>gi|195152617|ref|XP_002017233.1| GL22196 [Drosophila persimilis]
 gi|194112290|gb|EDW34333.1| GL22196 [Drosophila persimilis]
          Length = 627

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 155/294 (52%), Gaps = 42/294 (14%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           + Y +  +   R   F  N++  E+  + + G+A +G+ +F D++ ++ ++ TGL     
Sbjct: 330 RRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKERTGL---WQ 386

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            ++ +P+  AP         + A++        + P+ FDWR +  ++ VK QG C  CW
Sbjct: 387 RDEQKPTGGAP-------AVVPAYE-------GEFPKEFDWRQKNAVTPVKNQGSCGSCW 432

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQA 381
           AFS  G +E ++A++   L E S Q+L+DCD ++  CNGG MD+A + I D GG+  +  
Sbjct: 433 AFSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAE 492

Query: 382 YPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYY 441
           YPY+A + +  C         V+V  +  +P G E  M++W+ T GP+S+G+NAN + +Y
Sbjct: 493 YPYEAKKQQ--CHFNRTLS-HVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFY 549

Query: 442 SGGVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWGEK 473
            GGV    + L              YG S        +PYWIVKNSWG  WGE+
Sbjct: 550 RGGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 603



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  V   +L   + ++L+DCD ++  CNGG MD+A + I D GG+  +  YPY+A + + 
Sbjct: 443 LYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYEAKKQQ- 501

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C         V+V  +  +P G E  M++W+ T GP+S+G+NAN + +Y GGV    + 
Sbjct: 502 -CHFNRTLSH-VQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFYRGGVSHPWKA 559

Query: 610 LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H ++IVGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 560 LCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 603



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F     + Y +  +   R   F  N++  E+    + G+A + + +F D++ ++ ++
Sbjct: 321 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 380

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TGL      ++ +P+  AP         + A++        + P+ FDWR +  ++ VK
Sbjct: 381 RTGL---WQRDEQKPTGGAP-------AVVPAYE-------GEFPKEFDWRQKNAVTPVK 423

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G +E ++A++   L E S Q
Sbjct: 424 NQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQ 457


>gi|390178852|ref|XP_003736743.1| GA27408, isoform B [Drosophila pseudoobscura pseudoobscura]
 gi|388859612|gb|EIM52816.1| GA27408, isoform B [Drosophila pseudoobscura pseudoobscura]
          Length = 477

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 152/294 (51%), Gaps = 42/294 (14%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           + Y +  +   R   F  N++  E+  + + G+A +G+ +F D++ ++ ++ TGL     
Sbjct: 180 RRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKERTGL---WQ 236

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            ++ +P+  AP      + E               P+ FDWR +  ++ VK QG C  CW
Sbjct: 237 RDEQKPTGGAPAVVPAYEGE--------------FPKEFDWRQKNAVTPVKNQGSCGSCW 282

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQA 381
           AFS  G +E ++A++   L E S Q+L+DCD ++  CNGG MD+A + I D GG+  +  
Sbjct: 283 AFSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAE 342

Query: 382 YPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYY 441
           YPY+A + +  C         V+V  +  +P G E  M++W+ T GP+S+G+NAN + +Y
Sbjct: 343 YPYEAKKQQ--CHFNRTLS-HVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFY 399

Query: 442 SGGVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWGEK 473
            GGV    + L              YG S        +PYWIVKNSWG  WGE+
Sbjct: 400 RGGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 453



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  V   +L   + ++L+DCD ++  CNGG MD+A + I D GG+  +  YPY+A + + 
Sbjct: 293 LYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYEAKKQQ- 351

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C         V+V  +  +P G E  M++W+ T GP+S+G+NAN + +Y GGV    + 
Sbjct: 352 -CHFNRTLS-HVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAMQFYRGGVSHPWKA 409

Query: 610 LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H ++IVGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 410 LCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 453



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F     + Y +  +   R   F  N++  E+    + G+A + + +F D++ ++ ++
Sbjct: 171 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 230

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TGL      ++ +P+  AP      + E               P+ FDWR +  ++ VK
Sbjct: 231 RTGL---WQRDEQKPTGGAPAVVPAYEGE--------------FPKEFDWRQKNAVTPVK 273

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G +E ++A++   L E S Q
Sbjct: 274 NQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQ 307


>gi|224103643|ref|XP_002313136.1| predicted protein [Populus trichocarpa]
 gi|222849544|gb|EEE87091.1| predicted protein [Populus trichocarpa]
          Length = 477

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 173/325 (53%), Gaps = 36/325 (11%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E+ +  + K Y+++ +  RR E F  N++  + + S  + +   G+NKF DLS    +
Sbjct: 48  LYEMWLVKYGKAYNALGEKERRFEIFKDNLKFVDQHNSVGNPSYKLGLNKFADLSN---E 104

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
           +     L + ++  +  L  P S+               + GDDLPE+ DWR +G ++ V
Sbjct: 105 EYRAAYLGTRMDGKRRLLGGPKSARYL-----------FKDGDDLPESVDWREKGAVAPV 153

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD-MSNGGCNGGRMDDALQYI 370
           K+QG+C  CWAFS VG VE ++ I   +LT LS Q+LVDCD + N GCNGG MD A ++I
Sbjct: 154 KDQGQCGSCWAFSTVGAVEGINQIVTGNLTSLSEQELVDCDKVYNQGCNGGLMDYAFEFI 213

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           + NGG+ +++ YPYKA +S   C    +    V +  Y  +P  +E+ ++K VA + P+S
Sbjct: 214 MKNGGIDTEEDYPYKAVDSM--CDPNRKNARVVTIDGYEDVPQNDEKSLRKAVANQ-PVS 270

Query: 431 VGMNANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE---- 472
           V + A G  +  Y  GV        L+  +    YGT   + YW+V+NSWG  WGE    
Sbjct: 271 VAIEAGGRAFQLYQSGVFTGSCGTQLDHGVVAVGYGTENGVDYWVVRNSWGPAWGENGYI 330

Query: 473 KVEDKVGSSGNRTRDLELTGVLPSK 497
           ++E  V S+      + +    P+K
Sbjct: 331 RMERNVASTETGKCGIAMEASYPTK 355



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 93/162 (57%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++LVDCD + N GCNGG MD A ++I+ NGG+ +++ YPYKA +S   C
Sbjct: 177 IVTGNLTSLSEQELVDCDKVYNQGCNGGLMDYAFEFIMKNGGIDTEEDYPYKAVDSM--C 234

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P  +E+ ++K VA + P+SV + A G  +  Y  GV   +  
Sbjct: 235 DPNRKNARVVTIDGYEDVPQNDEKSLRKAVANQ-PVSVAIEAGGRAFQLYQSGVFTGS-- 291

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C  +  +H ++ VGYG E   D     YW+V+NSWG  WGE
Sbjct: 292 -CGTQL-DHGVVAVGYGTENGVD-----YWVVRNSWGPAWGE 326



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 17/161 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  + K Y+++ +  RR E F  N++  + +    + +    +NKF DLS+   ++   
Sbjct: 52  WLVKYGKAYNALGEKERRFEIFKDNLKFVDQHNSVGNPSYKLGLNKFADLSN---EEYRA 108

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
             L + ++  +  L  P S+               + GDDLPE+ DWR +G ++ VK+QG
Sbjct: 109 AYLGTRMDGKRRLLGGPKSARYL-----------FKDGDDLPESVDWREKGAVAPVKDQG 157

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH---HDKVYS 205
           +C  CWAFS VG VE ++ I   NLT LS Q     DKVY+
Sbjct: 158 QCGSCWAFSTVGAVEGINQIVTGNLTSLSEQELVDCDKVYN 198


>gi|347968731|ref|XP_003436277.1| AGAP002879-PB [Anopheles gambiae str. PEST]
 gi|333467869|gb|EGK96736.1| AGAP002879-PB [Anopheles gambiae str. PEST]
          Length = 1834

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 147/298 (49%), Gaps = 38/298 (12%)

Query: 198  QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
             HH + Y+S  +   R   F  N+ K E     + GTA +GV KF D++ ++ +  TGL 
Sbjct: 1529 HHHRRQYASSMEHEMRFNIFRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLV 1588

Query: 258  LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            +             P          R      +    DLP +FDWR  G +++VK QG C
Sbjct: 1589 V-------------PKHDRANHVGNRVASEEDVAGVGDLPRSFDWRDHGAVTEVKNQGSC 1635

Query: 318  ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
              CWAFSAVG VE +H I+   L   S Q+L+DCD  + GC GG MDDA + I   GG+ 
Sbjct: 1636 GSCWAFSAVGNVEGLHQIKTKKLESYSEQELIDCDKVDNGCGGGYMDDAFKAIEQLGGLE 1695

Query: 378  SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
             +  YPY+A ++++ C         V+VK    +P   E  + K++   GP+++G+NAN 
Sbjct: 1696 LENDYPYEA-KAQKSCHFNRSLSH-VQVKGAVDMPKN-ETYIAKYLIKNGPIAIGLNANA 1752

Query: 438  LFYYSGGVID-----LNQR-----------------LYGTSIPYWIVKNSWGSDWGEK 473
            + +Y GG+        N +                 ++  ++PYWI+KNSWG  WGE+
Sbjct: 1753 MQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQ 1810



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 4/164 (2%)

Query: 490  LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
            L  +   KL   + ++L+DCD  + GC GG MDDA + I   GG+  +  YPY+A ++++
Sbjct: 1650 LHQIKTKKLESYSEQELIDCDKVDNGCGGGYMDDAFKAIEQLGGLELENDYPYEA-KAQK 1708

Query: 550  GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
             C         V+VK    +P  E   + K++   GP+++G+NAN + +Y GG+      
Sbjct: 1709 SCHFNRSLSH-VQVKGAVDMPKNETY-IAKYLIKNGPIAIGLNANAMQFYRGGISHPWHP 1766

Query: 610  LCNPKAQNHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
            LCN K+ +H ++IVGYG +E      ++PYWI+KNSWG  WGE+
Sbjct: 1767 LCNHKSIDHGVLIVGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQ 1810



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 70/154 (45%), Gaps = 13/154 (8%)

Query: 45   FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
            F  F   H + Y+S  +   R   F  N+ K E   + + GTA + V KF D++ ++ + 
Sbjct: 1524 FDKFRHHHRRQYASSMEHEMRFNIFRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRA 1583

Query: 105  LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
             TGL +             P          R      +    DLP +FDWR  G +++VK
Sbjct: 1584 HTGLVV-------------PKHDRANHVGNRVASEEDVAGVGDLPRSFDWRDHGAVTEVK 1630

Query: 165  EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             QG C  CWAFSAVG VE +H I+   L   S Q
Sbjct: 1631 NQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQ 1664


>gi|347968733|ref|XP_312034.5| AGAP002879-PA [Anopheles gambiae str. PEST]
 gi|333467868|gb|EAA08025.5| AGAP002879-PA [Anopheles gambiae str. PEST]
          Length = 1810

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 147/298 (49%), Gaps = 38/298 (12%)

Query: 198  QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
             HH + Y+S  +   R   F  N+ K E     + GTA +GV KF D++ ++ +  TGL 
Sbjct: 1505 HHHRRQYASSMEHEMRFNIFRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLV 1564

Query: 258  LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            +             P          R      +    DLP +FDWR  G +++VK QG C
Sbjct: 1565 V-------------PKHDRANHVGNRVASEEDVAGVGDLPRSFDWRDHGAVTEVKNQGSC 1611

Query: 318  ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
              CWAFSAVG VE +H I+   L   S Q+L+DCD  + GC GG MDDA + I   GG+ 
Sbjct: 1612 GSCWAFSAVGNVEGLHQIKTKKLESYSEQELIDCDKVDNGCGGGYMDDAFKAIEQLGGLE 1671

Query: 378  SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
             +  YPY+A ++++ C         V+VK    +P   E  + K++   GP+++G+NAN 
Sbjct: 1672 LENDYPYEA-KAQKSCHFNRSLSH-VQVKGAVDMPKN-ETYIAKYLIKNGPIAIGLNANA 1728

Query: 438  LFYYSGGVID-----LNQR-----------------LYGTSIPYWIVKNSWGSDWGEK 473
            + +Y GG+        N +                 ++  ++PYWI+KNSWG  WGE+
Sbjct: 1729 MQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQ 1786



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 4/164 (2%)

Query: 490  LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
            L  +   KL   + ++L+DCD  + GC GG MDDA + I   GG+  +  YPY+A ++++
Sbjct: 1626 LHQIKTKKLESYSEQELIDCDKVDNGCGGGYMDDAFKAIEQLGGLELENDYPYEA-KAQK 1684

Query: 550  GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
             C         V+VK    +P  E   + K++   GP+++G+NAN + +Y GG+      
Sbjct: 1685 SCHFNRSLSH-VQVKGAVDMPKNETY-IAKYLIKNGPIAIGLNANAMQFYRGGISHPWHP 1742

Query: 610  LCNPKAQNHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
            LCN K+ +H ++IVGYG +E      ++PYWI+KNSWG  WGE+
Sbjct: 1743 LCNHKSIDHGVLIVGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQ 1786



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 70/154 (45%), Gaps = 13/154 (8%)

Query: 45   FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
            F  F   H + Y+S  +   R   F  N+ K E   + + GTA + V KF D++ ++ + 
Sbjct: 1500 FDKFRHHHRRQYASSMEHEMRFNIFRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRA 1559

Query: 105  LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
             TGL +             P          R      +    DLP +FDWR  G +++VK
Sbjct: 1560 HTGLVV-------------PKHDRANHVGNRVASEEDVAGVGDLPRSFDWRDHGAVTEVK 1606

Query: 165  EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             QG C  CWAFSAVG VE +H I+   L   S Q
Sbjct: 1607 NQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQ 1640


>gi|347968729|ref|XP_003436276.1| AGAP002879-PC [Anopheles gambiae str. PEST]
 gi|333467870|gb|EGK96737.1| AGAP002879-PC [Anopheles gambiae str. PEST]
          Length = 953

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 147/298 (49%), Gaps = 38/298 (12%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
            HH + Y+S  +   R   F  N+ K E     + GTA +GV KF D++ ++ +  TGL 
Sbjct: 648 HHHRRQYASSMEHEMRFNIFRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLV 707

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
           +             P          R      +    DLP +FDWR  G +++VK QG C
Sbjct: 708 V-------------PKHDRANHVGNRVASEEDVAGVGDLPRSFDWRDHGAVTEVKNQGSC 754

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
             CWAFSAVG VE +H I+   L   S Q+L+DCD  + GC GG MDDA + I   GG+ 
Sbjct: 755 GSCWAFSAVGNVEGLHQIKTKKLESYSEQELIDCDKVDNGCGGGYMDDAFKAIEQLGGLE 814

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
            +  YPY+A ++++ C         V+VK    +P   E  + K++   GP+++G+NAN 
Sbjct: 815 LENDYPYEA-KAQKSCHFNRSLSH-VQVKGAVDMP-KNETYIAKYLIKNGPIAIGLNANA 871

Query: 438 LFYYSGGVID-----LNQR-----------------LYGTSIPYWIVKNSWGSDWGEK 473
           + +Y GG+        N +                 ++  ++PYWI+KNSWG  WGE+
Sbjct: 872 MQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQ 929



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  +   KL   + ++L+DCD  + GC GG MDDA + I   GG+  +  YPY+A ++++
Sbjct: 769 LHQIKTKKLESYSEQELIDCDKVDNGCGGGYMDDAFKAIEQLGGLELENDYPYEA-KAQK 827

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C         V+VK    +P   E  + K++   GP+++G+NAN + +Y GG+      
Sbjct: 828 SCHFNRSLSH-VQVKGAVDMP-KNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHP 885

Query: 610 LCNPKAQNHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
           LCN K+ +H ++IVGYG +E      ++PYWI+KNSWG  WGE+
Sbjct: 886 LCNHKSIDHGVLIVGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQ 929



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 70/154 (45%), Gaps = 13/154 (8%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F   H + Y+S  +   R   F  N+ K E   + + GTA + V KF D++ ++ + 
Sbjct: 643 FDKFRHHHRRQYASSMEHEMRFNIFRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRA 702

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TGL +             P          R      +    DLP +FDWR  G +++VK
Sbjct: 703 HTGLVV-------------PKHDRANHVGNRVASEEDVAGVGDLPRSFDWRDHGAVTEVK 749

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFSAVG VE +H I+   L   S Q
Sbjct: 750 NQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQ 783


>gi|297794671|ref|XP_002865220.1| senescence-associated gene 12 [Arabidopsis lyrata subsp. lyrata]
 gi|297311055|gb|EFH41479.1| senescence-associated gene 12 [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 161/308 (52%), Gaps = 41/308 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG-TAVFGVNKFFDLSESDLQQL-TGLN 257
           H +VY+ V++   R+  F +NVE+ E   +  +G T    VN+F DL+  + + + TG  
Sbjct: 45  HGRVYADVKEKSNRYVVFKSNVERIEHLNNIPAGRTFKLAVNQFADLTNDEFRSMYTGFK 104

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             S+L            S+Q+ T+  +F++ ++  G  LP + DWR +G ++ +K QG C
Sbjct: 105 GVSSL------------SSQSQTKTTSFRYQNVSSGA-LPISVDWRTKGAVTPIKNQGSC 151

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
            CCWAFSAV  +E    I+   L  LS QQLVDCD ++ GC GG MD A ++I+  GG+ 
Sbjct: 152 GCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTNDFGCEGGLMDTAFEHIMATGGLT 211

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++  YPYK  ++   C   +       +  Y  +P  +E+ + K VA + P+SVG+   G
Sbjct: 212 TESNYPYKGEDAT--CNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQ-PVSVGIEGGG 268

Query: 438 --LFYYSGGVID------LNQRL----YGTSI---PYWIVKNSWGSDWGEK--------V 474
               +YS GV        L+  +    YG S     YWI+KNSWG+ WGE         +
Sbjct: 269 FDFQFYSSGVFTGECTTYLDHAVTAIGYGQSTNGSKYWIIKNSWGTKWGESGYMRIQKDI 328

Query: 475 EDKVGSSG 482
           +DK G  G
Sbjct: 329 KDKQGLCG 336



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 13/163 (7%)

Query: 491 TGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           T +   KL  L+ ++LVDCD ++ GC GG MD A ++I+  GG+ ++  YPYK  ++   
Sbjct: 167 TQIKKGKLISLSEQQLVDCDTNDFGCEGGLMDTAFEHIMATGGLTTESNYPYKGEDAT-- 224

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
           C   +       +  Y  +P  +E+ + K VA + P+SVG+   G    +YS GV     
Sbjct: 225 CNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQ-PVSVGIEGGGFDFQFYSSGVFTGE- 282

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C     +HA+  +GYG+          YWI+KNSWG+ WGE
Sbjct: 283 --CTTYL-DHAVTAIGYGQSTNGS----KYWIIKNSWGTKWGE 318



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 15/158 (9%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSG-TAVFEVNKFFDLSDSDL 102
           R + +M  H +VY+ V++   R+  F +NVE+ E      +G T    VN+F DL++ + 
Sbjct: 37  RHIEWMTKHGRVYADVKEKSNRYVVFKSNVERIEHLNNIPAGRTFKLAVNQFADLTNDEF 96

Query: 103 QQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
           + + TG    S+L            S+Q+ T+  +F++ ++  G  LP + DWR +G ++
Sbjct: 97  RSMYTGFKGVSSL------------SSQSQTKTTSFRYQNVSSGA-LPISVDWRTKGAVT 143

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +K QG C CCWAFSAV  +E    I+   L  LS Q 
Sbjct: 144 PIKNQGSCGCCWAFSAVAAIEGATQIKKGKLISLSEQQ 181


>gi|224131910|ref|XP_002328138.1| predicted protein [Populus trichocarpa]
 gi|222837653|gb|EEE76018.1| predicted protein [Populus trichocarpa]
          Length = 349

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/317 (37%), Positives = 165/317 (52%), Gaps = 41/317 (12%)

Query: 175 FSAVGVVEAMHAIQGNNLTELS---VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSED 231
           FS VG     H    + L EL    +  H K Y+S+E+ L R E F  N+ K  D ++++
Sbjct: 27  FSIVGY-SPEHLTSVDKLVELFESWISGHGKAYNSLEEKLHRFEVFKENL-KHIDQRNKE 84

Query: 232 SGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 291
             +   G+N+F DLS  + +        S    + P      SS             S R
Sbjct: 85  VTSYWLGLNEFADLSHEEFK--------SKFLGLYPEFPRKKSSEDF----------SYR 126

Query: 292 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC 351
              DLP++ DWR +G ++ VK QG C  CWAFS V  VE ++ I   +LT LS QQL+DC
Sbjct: 127 DVVDLPKSIDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVAGNLTSLSEQQLIDC 186

Query: 352 DMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 410
           D S N GCNGG MD A ++I++NGG+  ++ YPY   E    C    EE   V +  Y  
Sbjct: 187 DTSFNNGCNGGLMDYAFEFIVNNGGLHKEEDYPYLMEEGT--CDEKREEMEVVTISGYHD 244

Query: 411 IPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTS-- 456
           +P  +E+ + K +A + PLSV ++A+G    +YSGGV       DL+  +    YG+S  
Sbjct: 245 VPRNDEQSLLKALAHQ-PLSVAIDASGRDFQFYSGGVFSGPCGTDLDHGVAAVGYGSSSG 303

Query: 457 IPYWIVKNSWGSDWGEK 473
           I Y IVKNSWG  WGE+
Sbjct: 304 IDYIIVKNSWGPKWGER 320



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 15/166 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD S N GCNGG MD A ++I++NGG+  ++ YPY   E    C
Sbjct: 170 IVAGNLTSLSEQQLIDCDTSFNNGCNGGLMDYAFEFIVNNGGLHKEEDYPYLMEEGT--C 227

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
               EE   V +  Y  +P  +E+ + K +A + PLSV ++A+G    +YSGGV      
Sbjct: 228 DEKREEMEVVTISGYHDVPRNDEQSLLKALAHQ-PLSVAIDASGRDFQFYSGGVF---SG 283

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
            C     +H +  VGYG       + I Y IVKNSWG  WGE+  L
Sbjct: 284 PCGTDL-DHGVAAVGYGSS-----SGIDYIIVKNSWGPKWGERGYL 323



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 111/265 (41%), Gaps = 48/265 (18%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V  F +++  H K Y+S+E+ L R E F  N+ K  D + ++  +    +N+F DLS  +
Sbjct: 44  VELFESWISGHGKAYNSLEEKLHRFEVFKENL-KHIDQRNKEVTSYWLGLNEFADLSHEE 102

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +        S    + P      SS             S R   DLP++ DWR +G ++
Sbjct: 103 FK--------SKFLGLYPEFPRKKSSEDF----------SYRDVVDLPKSIDWRKKGAVT 144

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED-----LLRRHEN 216
            VK QG C  CWAFS V  VE ++ I   NLT LS Q      +S  +     L+     
Sbjct: 145 PVKNQGSCGSCWAFSTVAAVEGINQIVAGNLTSLSEQQLIDCDTSFNNGCNGGLMDYAFE 204

Query: 217 FVTN---VEKAEDYQS-EDSGTA--------VFGVNKFFDLSESDLQQLTGLNLDSTLED 264
           F+ N   + K EDY    + GT         V  ++ + D+  +D Q L           
Sbjct: 205 FIVNNGGLHKEEDYPYLMEEGTCDEKREEMEVVTISGYHDVPRNDEQSL----------- 253

Query: 265 IQPSLQAPFSSNQTDTEMRAFQFNS 289
           ++     P S    D   R FQF S
Sbjct: 254 LKALAHQPLSV-AIDASGRDFQFYS 277


>gi|18422605|ref|NP_568651.1| senescence-associated protein 12 [Arabidopsis thaliana]
 gi|13877737|gb|AAK43946.1|AF370131_1 putative senescence-specific cysteine protease SAG12 [Arabidopsis
           thaliana]
 gi|9758936|dbj|BAB09317.1| senescence-specific cysteine protease [Arabidopsis thaliana]
 gi|14532898|gb|AAK64131.1| putative senescence-specific cysteine protease SAG12 [Arabidopsis
           thaliana]
 gi|332007929|gb|AED95312.1| senescence-associated protein 12 [Arabidopsis thaliana]
          Length = 346

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/308 (35%), Positives = 158/308 (51%), Gaps = 41/308 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG-TAVFGVNKFFDLSESDLQQL-TGLN 257
           H +VY+ V++   R+  F  NVE+ E   S  +G T    VN+F DL+  + + + TG  
Sbjct: 45  HGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTNDEFRSMYTGFK 104

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             S L            S+Q+ T+M  F++ ++  G  LP + DWR +G ++ +K QG C
Sbjct: 105 GVSAL------------SSQSQTKMSPFRYQNVSSGA-LPVSVDWRKKGAVTPIKNQGSC 151

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
            CCWAFSAV  +E    I+   L  LS QQLVDCD ++ GC GG MD A ++I   GG+ 
Sbjct: 152 GCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTNDFGCEGGLMDTAFEHIKATGGLT 211

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++  YPYK  ++   C   +       +  Y  +P  +E+ + K VA + P+SVG+   G
Sbjct: 212 TESNYPYKGEDAT--CNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQ-PVSVGIEGGG 268

Query: 438 --LFYYSGGVID------LNQRL----YGTSI---PYWIVKNSWGSDWGEK--------V 474
               +YS GV        L+  +    YG S     YWI+KNSWG+ WGE         V
Sbjct: 269 FDFQFYSSGVFTGECTTYLDHAVTAIGYGESTNGSKYWIIKNSWGTKWGESGYMRIQKDV 328

Query: 475 EDKVGSSG 482
           +DK G  G
Sbjct: 329 KDKQGLCG 336



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 13/163 (7%)

Query: 491 TGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           T +   KL  L+ ++LVDCD ++ GC GG MD A ++I   GG+ ++  YPYK  ++   
Sbjct: 167 TQIKKGKLISLSEQQLVDCDTNDFGCEGGLMDTAFEHIKATGGLTTESNYPYKGEDAT-- 224

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
           C   +       +  Y  +P  +E+ + K VA + P+SVG+   G    +YS GV     
Sbjct: 225 CNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQ-PVSVGIEGGGFDFQFYSSGVFTGE- 282

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C     +HA+  +GYGE          YWI+KNSWG+ WGE
Sbjct: 283 --CTTYL-DHAVTAIGYGESTNGS----KYWIIKNSWGTKWGE 318



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 25/196 (12%)

Query: 13  GLGYLHTFMIKVALLESNIFQTRGYLNSPV-------TRFLNFMRDHDKVYSSVEDLLRR 65
            L ++  F+  VA+  S  F     L+ P+        R + +M  H +VY+ V++   R
Sbjct: 2   ALKHMQIFLF-VAIFSSFCFSIT--LSRPLDNELIMQKRHIEWMTKHGRVYADVKEENNR 58

Query: 66  HENFVTNVEKAEDYQREDSG-TAVFEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQPSLQA 123
           +  F  NVE+ E      +G T    VN+F DL++ + + + TG    S L         
Sbjct: 59  YVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTNDEFRSMYTGFKGVSAL--------- 109

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
              S+Q+ T+M  F++ ++  G  LP + DWR +G ++ +K QG C CCWAFSAV  +E 
Sbjct: 110 ---SSQSQTKMSPFRYQNVSSGA-LPVSVDWRKKGAVTPIKNQGSCGCCWAFSAVAAIEG 165

Query: 184 MHAIQGNNLTELSVQH 199
              I+   L  LS Q 
Sbjct: 166 ATQIKKGKLISLSEQQ 181


>gi|332026794|gb|EGI66903.1| Putative cysteine proteinase [Acromyrmex echinatior]
          Length = 774

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/297 (35%), Positives = 158/297 (53%), Gaps = 46/297 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           +++ YSS+E  LR  + F  N+   E+ +  + GT ++GVN F D+S+ + + +  GL  
Sbjct: 477 YNRTYSSLERNLR-FKIFRENLNFIEELRETEQGTGIYGVNMFADMSQKEFRTRYLGLRP 535

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
           D   E+  P  +A                       DLP +FDWR +GV++ VK QG+C 
Sbjct: 536 DLQSENEIPLPKAEIPD------------------IDLPSSFDWRQKGVVTPVKNQGQCG 577

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
            CWAFS  G VE  +AI+   L  LS Q+LVDCD  + GCNGG  D+A + I   GG+  
Sbjct: 578 SCWAFSVTGNVEGQYAIKHGQLLSLSEQELVDCDHLDEGCNGGLPDNAYRAIEQLGGLEL 637

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           +  YPY+A E+E+     ++   KV++     I    E ++ +W+   GP+++G+NAN +
Sbjct: 638 ESDYPYEA-ENEKCHF--KQNLVKVELASAVNI-TSNETQIAQWLVQNGPIAIGINANAM 693

Query: 439 FYYSGGVI----------DLNQRL----YGTS--------IPYWIVKNSWGSDWGEK 473
            +Y GGV           +LN  +    YGTS        +PYWI+KNSWG  WGE+
Sbjct: 694 QFYMGGVSHPLKILCNPNNLNHGVLIVGYGTSRYPLFHKNLPYWIIKNSWGKSWGEQ 750



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 94/157 (59%), Gaps = 5/157 (3%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCD  + GCNGG  D+A + I   GG+  +  YPY+A E+E+     ++
Sbjct: 598 QLLSLSEQELVDCDHLDEGCNGGLPDNAYRAIEQLGGLELESDYPYEA-ENEKCHF--KQ 654

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
              KV++     I    E ++ +W+   GP+++G+NAN + +Y GGV    + LCNP   
Sbjct: 655 NLVKVELASAVNI-TSNETQIAQWLVQNGPIAIGINANAMQFYMGGVSHPLKILCNPNNL 713

Query: 617 NHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           NH ++IVGYG         ++PYWI+KNSWG  WGE+
Sbjct: 714 NHGVLIVGYGTSRYPLFHKNLPYWIIKNSWGKSWGEQ 750



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 20/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           F NFM  +++ YSS+E  LR  + F  N+   E+ +  + GT ++ VN F D+S  + + 
Sbjct: 470 FNNFMTTYNRTYSSLERNLR-FKIFRENLNFIEELRETEQGTGIYGVNMFADMSQKEFRT 528

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +  GL  D   E+  P  +A                       DLP +FDWR +GV++ V
Sbjct: 529 RYLGLRPDLQSENEIPLPKAEIPD------------------IDLPSSFDWRQKGVVTPV 570

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG+C  CWAFS  G VE  +AI+   L  LS Q
Sbjct: 571 KNQGQCGSCWAFSVTGNVEGQYAIKHGQLLSLSEQ 605


>gi|209978824|ref|YP_002300567.1| cathepsin [Adoxophyes orana nucleopolyhedrovirus]
 gi|192758806|gb|ACF05341.1| cathepsin [Adoxophyes orana nucleopolyhedrovirus]
          Length = 337

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 169/313 (53%), Gaps = 44/313 (14%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL-QQ 252
           E  + +++K Y+  +    R + FV N+E   + +++ + +A++ +NKF DLS+++L  +
Sbjct: 33  ETFIVNYNKQYADTKTKNYRFKIFVQNLEYINE-KNKLNDSAIYNINKFSDLSKNELLTK 91

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH-------GDDLPEAFDWRAE 305
            TGL         +PS     +SN          F ++ H        D+LP+ FDWR  
Sbjct: 92  YTGLT------SRKPSNMVKSTSN----------FCNVIHLDAPPDARDELPQNFDWRVN 135

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDD 365
             ++ VK+QG C  CWA +AVG +E ++AI+ N L  LS QQL+DCD +N  C+GG M  
Sbjct: 136 NKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDSANMACDGGLMHT 195

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
           A + +++ GG++ +  YPY+ +   +G    + + F + V    R  +  EE +KK + T
Sbjct: 196 AFEQLMNAGGLMEEIDYPYQGT---KGICKIDNKKFALSVSSCKRYIFQNEENLKKELIT 252

Query: 426 RGPLSVGMNANGLFYYSGGVIDLNQRL----------YGTS--IPYWIVKNSWGSDWGE- 472
            GP+++ ++A  +  YS G+I   + L          YGT   + YW +KNSWGSDWGE 
Sbjct: 253 TGPIAMAIDAASISTYSKGIIHFCENLGLNHAVLLVGYGTEGGVSYWTLKNSWGSDWGED 312

Query: 473 ---KVEDKVGSSG 482
              +V+  + + G
Sbjct: 313 GYFRVKRNINACG 325



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 12/162 (7%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  +  + L  L+ ++L+DCD +N  C+GG M  A + +++ GG++ +  YPY+ +   +
Sbjct: 162 LYAIKHNYLINLSEQQLIDCDSANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGT---K 218

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
           G    + + F + V    R  +  EE +KK + T GP+++ ++A  +  YS G+I     
Sbjct: 219 GICKIDNKKFALSVSSCKRYIFQNEENLKKELITTGPIAMAIDAASISTYSKGII----H 274

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C     NHA+++VGYG E       + YW +KNSWGSDWGE
Sbjct: 275 FCENLGLNHAVLLVGYGTE-----GGVSYWTLKNSWGSDWGE 311



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 25/162 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL-Q 103
           F  F+ +++K Y+  +    R + FV N+E   +  + +  +A++ +NKF DLS ++L  
Sbjct: 32  FETFIVNYNKQYADTKTKNYRFKIFVQNLEYINEKNKLND-SAIYNINKFSDLSKNELLT 90

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH-------GDDLPEAFDWRA 156
           + TGL         +PS     +SN          F ++ H        D+LP+ FDWR 
Sbjct: 91  KYTGLT------SRKPSNMVKSTSN----------FCNVIHLDAPPDARDELPQNFDWRV 134

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
              ++ VK+QG C  CWA +AVG +E ++AI+ N L  LS Q
Sbjct: 135 NNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQ 176


>gi|290997496|ref|XP_002681317.1| cysteine protease [Naegleria gruberi]
 gi|284094941|gb|EFC48573.1| cysteine protease [Naegleria gruberi]
          Length = 350

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/304 (34%), Positives = 158/304 (51%), Gaps = 47/304 (15%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           + H K+Y + ED  +R++ F +NVEKA  Y +       FGV+KF DL+  + +++  L 
Sbjct: 41  KKHAKLYGA-EDHGKRYQIFKSNVEKAR-YYNHVGKRETFGVSKFMDLTPEEFKRMF-LM 97

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
              T E+ +  L AP  +  T  +++           D P ++DWR +G ++ VK QG C
Sbjct: 98  KTYTPEEARKILAAPKEAVVTAQQVK-----------DTPTSWDWRQKGAVTPVKNQGAC 146

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS----------NGGCNGGRMDDAL 367
             CW FS  G VE +H I+   L  LS QQLVDCD +          + GCNGG M  A 
Sbjct: 147 GSCWTFSTTGNVEGIHQIKTGKLVSLSEQQLVDCDHNCVTYQGQQACDAGCNGGLMWSAF 206

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           QY+I  GG+V++ +YPY+  +    C    +    V +  ++ IP  +E +M  W+A  G
Sbjct: 207 QYVIKTGGLVTEDSYPYEGVDDT--CRF-NKSNVAVTINSWTSIP-SDEGKMAAWLAANG 262

Query: 428 PLSVGMNANGLFYYSGGVI--------DLNQRL----YGTSI-------PYWIVKNSWGS 468
           P+S+ +NA  L  Y+ G+         DL+  +    +GT          YWI+KNSWG+
Sbjct: 263 PISIAINAEWLQTYTSGISNPWFCNPQDLDHGVLIVGFGTGSNWLGEKEDYWIIKNSWGA 322

Query: 469 DWGE 472
           DWGE
Sbjct: 323 DWGE 326



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 16/165 (9%)

Query: 497 KLSRLATEKLVDCDMS----------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASE 546
           KL  L+ ++LVDCD +          + GCNGG M  A QY+I  GG+V++ +YPY+  +
Sbjct: 168 KLVSLSEQQLVDCDHNCVTYQGQQACDAGCNGGLMWSAFQYVIKTGGLVTEDSYPYEGVD 227

Query: 547 SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDL 606
               C   +     V +  ++ IP  +E +M  W+A  GP+S+ +NA  L  Y+ G+   
Sbjct: 228 DT--CRFNKSN-VAVTINSWTSIP-SDEGKMAAWLAANGPISIAINAEWLQTYTSGI--S 281

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           N   CNP+  +H ++IVG+G      G    YWI+KNSWG+DWGE
Sbjct: 282 NPWFCNPQDLDHGVLIVGFGTGSNWLGEKEDYWIIKNSWGADWGE 326



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 14/155 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F+ F + H K+Y + ED  +R++ F +NVEKA  Y         F V+KF DL+  + ++
Sbjct: 36  FVKFSKKHAKLYGA-EDHGKRYQIFKSNVEKARYYNHVGK-RETFGVSKFMDLTPEEFKR 93

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +  L    T E+ +  L AP  +  T  +++           D P ++DWR +G ++ VK
Sbjct: 94  MF-LMKTYTPEEARKILAAPKEAVVTAQQVK-----------DTPTSWDWRQKGAVTPVK 141

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG C  CW FS  G VE +H I+   L  LS Q 
Sbjct: 142 NQGACGSCWTFSTTGNVEGIHQIKTGKLVSLSEQQ 176


>gi|170032975|ref|XP_001844355.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167873312|gb|EDS36695.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1454

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 153/296 (51%), Gaps = 40/296 (13%)

Query: 200  HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
            H++ Y S  +   R   F  N+ K E     + GTA +G+  F D++ ++ +  TGL + 
Sbjct: 1153 HNRTYQSSLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYGITHFADMTSAEYRARTGLVVP 1212

Query: 260  STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
               +++   ++ P +  + D  M            +LP+AFDWR  G +S+VK QG C  
Sbjct: 1213 REGDEVN-HIRNPMA--EIDEHM------------ELPDAFDWRELGAVSEVKNQGNCGS 1257

Query: 320  CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
            CWAFS VG +E +H ++   L E S Q+L+DCD  +  CNGG MDDA + I   GG+  +
Sbjct: 1258 CWAFSVVGNIEGLHQVKTKKLEEYSEQELLDCDTVDSACNGGFMDDAYKAIEKIGGLELE 1317

Query: 380  QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
              YPY A + ++ C   +     V+VK    +P   E  + +++   GP+S+G+NAN + 
Sbjct: 1318 SEYPYLA-KKQKTCHFNKTMAH-VRVKGAVDLPKN-ETAIAQFLVANGPVSIGLNANAMQ 1374

Query: 440  YYSGGVI----------DLNQ------------RLYGTSIPYWIVKNSWGSDWGEK 473
            +Y GG+           +L+              ++  ++PYWIVKNSWG  WGE+
Sbjct: 1375 FYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEYPMFNKTLPYWIVKNSWGPKWGEQ 1430



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 95/164 (57%), Gaps = 4/164 (2%)

Query: 490  LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
            L  V   KL   + ++L+DCD  +  CNGG MDDA + I   GG+  +  YPY A + ++
Sbjct: 1270 LHQVKTKKLEEYSEQELLDCDTVDSACNGGFMDDAYKAIEKIGGLELESEYPYLAKK-QK 1328

Query: 550  GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
             C   +     V+VK    +P  E   + +++   GP+S+G+NAN + +Y GG+    + 
Sbjct: 1329 TCHFNKTMAH-VRVKGAVDLPKNETA-IAQFLVANGPVSIGLNANAMQFYRGGISHPWKP 1386

Query: 610  LCNPKAQNHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
            LC+ K  +H ++IVGYG +E      ++PYWIVKNSWG  WGE+
Sbjct: 1387 LCSKKNLDHGVLIVGYGVKEYPMFNKTLPYWIVKNSWGPKWGEQ 1430



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 15/154 (9%)

Query: 45   FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
            F  F   H++ Y S  +   R   F  N+ K E   + + GTA + +  F D++ ++ + 
Sbjct: 1146 FDKFKTRHNRTYQSSLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYGITHFADMTSAEYRA 1205

Query: 105  LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
             TGL +    +++   ++ P +  + D  M            +LP+AFDWR  G +S+VK
Sbjct: 1206 RTGLVVPREGDEVN-HIRNPMA--EIDEHM------------ELPDAFDWRELGAVSEVK 1250

Query: 165  EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             QG C  CWAFS VG +E +H ++   L E S Q
Sbjct: 1251 NQGNCGSCWAFSVVGNIEGLHQVKTKKLEEYSEQ 1284


>gi|189239337|ref|XP_973607.2| PREDICTED: similar to cathepsin F-like cysteine protease [Tribolium
            castaneum]
          Length = 1726

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 144/283 (50%), Gaps = 44/283 (15%)

Query: 213  RHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAP 272
            R   FV N+ +     + + GTA +G+ +F D+++ +  +  GL  D   E+  P  QA 
Sbjct: 1442 RFNVFVQNLMQIRVLNTFEQGTATYGITRFADMTQKEFSRSLGLRTDLRNENETPFAQAK 1501

Query: 273  FSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAM 332
              + +                  LP+ FDWR + V+++VK Q +C  CWAFS  G VE  
Sbjct: 1502 IPNIE------------------LPKEFDWRKKNVVTEVKNQEQCGSCWAFSVTGNVEGQ 1543

Query: 333  HAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 392
            +A++   L E S Q+LVDCD  + GCNGG MD A + I   GG+ ++Q YPY A + +  
Sbjct: 1544 YALRHGKLLEFSEQELVDCDTDDQGCNGGLMDTAYRSIEKIGGLETEQDYPYDAEDEK-- 1601

Query: 393  CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV------- 445
            C        +V+V     I +  E +M KW+   GP+S+ +NAN + +Y GGV       
Sbjct: 1602 CHFNRTLA-RVQVTGALNISHN-ETDMAKWLVANGPISIAINANAMQFYMGGVSHPFKFL 1659

Query: 446  -----ID----------LNQRLYGTSIPYWIVKNSWGSDWGEK 473
                 +D           N  L+  S+PYWIVKNSWG+ WGE+
Sbjct: 1660 CSPKNLDHGVLIVGYGVHNYPLFKKSLPYWIVKNSWGTGWGEQ 1702



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 95/160 (59%), Gaps = 11/160 (6%)

Query: 497  KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
            KL   + ++LVDCD  + GCNGG MD A + I   GG+ ++Q YPY A + +  C     
Sbjct: 1550 KLLEFSEQELVDCDTDDQGCNGGLMDTAYRSIEKIGGLETEQDYPYDAEDEK--CHFNRT 1607

Query: 557  EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
               +V+V     I + E + M KW+   GP+S+ +NAN + +Y GGV    + LC+PK  
Sbjct: 1608 LA-RVQVTGALNISHNETD-MAKWLVANGPISIAINANAMQFYMGGVSHPFKFLCSPKNL 1665

Query: 617  NHALIIVGYGEEE----KKDGTSIPYWIVKNSWGSDWGEK 652
            +H ++IVGYG       KK   S+PYWIVKNSWG+ WGE+
Sbjct: 1666 DHGVLIVGYGVHNYPLFKK---SLPYWIVKNSWGTGWGEQ 1702



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 18/134 (13%)

Query: 65   RHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAP 124
            R   FV N+ +       + GTA + + +F D++  +  +  GL  D   E+  P  QA 
Sbjct: 1442 RFNVFVQNLMQIRVLNTFEQGTATYGITRFADMTQKEFSRSLGLRTDLRNENETPFAQAK 1501

Query: 125  FSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAM 184
              + +                  LP+ FDWR + V+++VK Q +C  CWAFS  G VE  
Sbjct: 1502 IPNIE------------------LPKEFDWRKKNVVTEVKNQEQCGSCWAFSVTGNVEGQ 1543

Query: 185  HAIQGNNLTELSVQ 198
            +A++   L E S Q
Sbjct: 1544 YALRHGKLLEFSEQ 1557


>gi|312378084|gb|EFR24752.1| hypothetical protein AND_10451 [Anopheles darlingi]
          Length = 1785

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 151/297 (50%), Gaps = 41/297 (13%)

Query: 199  HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            HH + Y+S  +   R+  F  N+ K +     + GT  +GV KF D++ ++ +  TGL +
Sbjct: 1484 HHQRQYASSFEHEMRYNIFRNNLYKIDQLNRHERGTGKYGVTKFADMTTAEYRAHTGLIV 1543

Query: 259  DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                 +    ++ P ++  T+                LP +FDWR  G ++ VK QG C 
Sbjct: 1544 PKQHSN---HIRNPIATVSTER-------------TSLPTSFDWRDHGAVTGVKNQGNCG 1587

Query: 319  CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
             CWAFSA+G +E +H I+   L   S Q+L+DCD  + GCNGG MDDA + I   GG+  
Sbjct: 1588 SCWAFSAIGNIEGLHQIKTKKLEAYSEQELIDCDTVDNGCNGGYMDDAFKAIEKLGGLEL 1647

Query: 379  DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
            +  YPY+A ++++ C   +     V+VK    +P   E  + +++   GP+++G+NAN +
Sbjct: 1648 EDEYPYQA-KAQKTCHFNKTLSH-VRVKGAVDMPKN-ETFIAQYLIENGPIAIGLNANAM 1704

Query: 439  FYYSGGV------------ID----------LNQRLYGTSIPYWIVKNSWGSDWGEK 473
             +Y GG+            ID              L+  ++PYW +KNSWG  WGE+
Sbjct: 1705 QFYRGGISHPWHLLCSHKQIDHGVLIVGYGVKEYPLFNKTLPYWTIKNSWGPKWGEQ 1761



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 96/164 (58%), Gaps = 4/164 (2%)

Query: 490  LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
            L  +   KL   + ++L+DCD  + GCNGG MDDA + I   GG+  +  YPY+A ++++
Sbjct: 1601 LHQIKTKKLEAYSEQELIDCDTVDNGCNGGYMDDAFKAIEKLGGLELEDEYPYQA-KAQK 1659

Query: 550  GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
             C   +     V+VK    +P   E  + +++   GP+++G+NAN + +Y GG+      
Sbjct: 1660 TCHFNKTLSH-VRVKGAVDMPKN-ETFIAQYLIENGPIAIGLNANAMQFYRGGISHPWHL 1717

Query: 610  LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
            LC+ K  +H ++IVGYG +E      ++PYW +KNSWG  WGE+
Sbjct: 1718 LCSHKQIDHGVLIVGYGVKEYPLFNKTLPYWTIKNSWGPKWGEQ 1761



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 16/155 (10%)

Query: 44   RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            +F  F   H + Y+S  +   R+  F  N+ K +   R + GT  + V KF D++ ++ +
Sbjct: 1477 QFEKFKLHHQRQYASSFEHEMRYNIFRNNLYKIDQLNRHERGTGKYGVTKFADMTTAEYR 1536

Query: 104  QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
              TGL +     +    ++ P ++  T+                LP +FDWR  G ++ V
Sbjct: 1537 AHTGLIVPKQHSN---HIRNPIATVSTER-------------TSLPTSFDWRDHGAVTGV 1580

Query: 164  KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            K QG C  CWAFSA+G +E +H I+   L   S Q
Sbjct: 1581 KNQGNCGSCWAFSAIGNIEGLHQIKTKKLEAYSEQ 1615


>gi|270011071|gb|EFA07519.1| cystatin [Tribolium castaneum]
          Length = 1761

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 144/283 (50%), Gaps = 44/283 (15%)

Query: 213  RHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAP 272
            R   FV N+ +     + + GTA +G+ +F D+++ +  +  GL  D   E+  P  QA 
Sbjct: 1477 RFNVFVQNLMQIRVLNTFEQGTATYGITRFADMTQKEFSRSLGLRTDLRNENETPFAQAK 1536

Query: 273  FSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAM 332
              + +                  LP+ FDWR + V+++VK Q +C  CWAFS  G VE  
Sbjct: 1537 IPNIE------------------LPKEFDWRKKNVVTEVKNQEQCGSCWAFSVTGNVEGQ 1578

Query: 333  HAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 392
            +A++   L E S Q+LVDCD  + GCNGG MD A + I   GG+ ++Q YPY A + +  
Sbjct: 1579 YALRHGKLLEFSEQELVDCDTDDQGCNGGLMDTAYRSIEKIGGLETEQDYPYDAEDEK-- 1636

Query: 393  CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV------- 445
            C        +V+V     I +  E +M KW+   GP+S+ +NAN + +Y GGV       
Sbjct: 1637 CHFNRTLA-RVQVTGALNISHN-ETDMAKWLVANGPISIAINANAMQFYMGGVSHPFKFL 1694

Query: 446  -----ID----------LNQRLYGTSIPYWIVKNSWGSDWGEK 473
                 +D           N  L+  S+PYWIVKNSWG+ WGE+
Sbjct: 1695 CSPKNLDHGVLIVGYGVHNYPLFKKSLPYWIVKNSWGTGWGEQ 1737



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 95/160 (59%), Gaps = 11/160 (6%)

Query: 497  KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
            KL   + ++LVDCD  + GCNGG MD A + I   GG+ ++Q YPY A + +  C     
Sbjct: 1585 KLLEFSEQELVDCDTDDQGCNGGLMDTAYRSIEKIGGLETEQDYPYDAEDEK--CHFNRT 1642

Query: 557  EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
               +V+V     I + E + M KW+   GP+S+ +NAN + +Y GGV    + LC+PK  
Sbjct: 1643 LA-RVQVTGALNISHNETD-MAKWLVANGPISIAINANAMQFYMGGVSHPFKFLCSPKNL 1700

Query: 617  NHALIIVGYGEEE----KKDGTSIPYWIVKNSWGSDWGEK 652
            +H ++IVGYG       KK   S+PYWIVKNSWG+ WGE+
Sbjct: 1701 DHGVLIVGYGVHNYPLFKK---SLPYWIVKNSWGTGWGEQ 1737



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 18/134 (13%)

Query: 65   RHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAP 124
            R   FV N+ +       + GTA + + +F D++  +  +  GL  D   E+  P  QA 
Sbjct: 1477 RFNVFVQNLMQIRVLNTFEQGTATYGITRFADMTQKEFSRSLGLRTDLRNENETPFAQAK 1536

Query: 125  FSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAM 184
              + +                  LP+ FDWR + V+++VK Q +C  CWAFS  G VE  
Sbjct: 1537 IPNIE------------------LPKEFDWRKKNVVTEVKNQEQCGSCWAFSVTGNVEGQ 1578

Query: 185  HAIQGNNLTELSVQ 198
            +A++   L E S Q
Sbjct: 1579 YALRHGKLLEFSEQ 1592


>gi|198427474|ref|XP_002119872.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 596

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 184/410 (44%), Gaps = 91/410 (22%)

Query: 192 LTELSVQHHDKVYSSVEDLL-RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           L ++ ++ + + YSS  D    R E F TN +  +     + GTAV+G+ KF D+SE + 
Sbjct: 168 LFDMFLEKYPRTYSSSSDEYNERFEIFKTNYQVVQHLNEIERGTAVYGITKFMDMSEEEY 227

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +         L  IQ       +S + DT              ++P++ DWR  G +++
Sbjct: 228 HRTLAPGFTRPLVPIQT-----LNSAELDTT-------------NIPDSMDWRKHGAVTE 269

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYI 370
           VK QG C  CWAFS  G VE    ++   L  LS Q+LVDCD  + GC GG   +A + I
Sbjct: 270 VKNQGSCGSCWAFSTTGNVEGQWFLKHKKLISLSEQELVDCDTLDSGCGGGLPSNAYKSI 329

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
              GG+  ++ YPY   E E+ C + + + FKV V     +P  +E ++  W+A  GP+S
Sbjct: 330 EKLGGLEPEKDYPY-VGEGEK-CAIKQSD-FKVFVNNSVALP-KDEVKLAAWLAQNGPIS 385

Query: 431 VGMNANGLFYYSGGV-----IDLNQRL---------YGT--SIPYWIVKNSWGSDWGEKV 474
           +G+NAN + +Y GG+     I  N +          YGT    P+WI+KNSWG DWGE+ 
Sbjct: 386 IGINANLMQFYWGGISHPWKIFCNPKSLDHGVLIVGYGTENGTPFWIIKNSWGPDWGEEE 445

Query: 475 EDKVGSSGNRTRDLELTGVLPS-------------------------------------- 496
           E     +   TR L     L S                                      
Sbjct: 446 EYHRTLAPGFTRPLVPIQTLNSAELDTTNIPDSMDWRKHGAVTEVKNQGSCGSCWAFSTT 505

Query: 497 ------------KLSRLATEKLVDCDMSNGGCNGGRMDDALQYI--IDNG 532
                       KL  L+ ++LVDCD  + GC GG   +A + I  ++NG
Sbjct: 506 GNVEGQWFLKHKKLISLSEQELVDCDTLDSGCGGGLPSNAYKSIEKLENG 555



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 98/156 (62%), Gaps = 9/156 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GC GG   +A + I   GG+  ++ YPY   E E+ C + + 
Sbjct: 298 KLISLSEQELVDCDTLDSGCGGGLPSNAYKSIEKLGGLEPEKDYPY-VGEGEK-CAIKQS 355

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           + FKV V     +P  +E ++  W+A  GP+S+G+NAN + +Y GG+    +  CNPK+ 
Sbjct: 356 D-FKVFVNNSVALP-KDEVKLAAWLAQNGPISIGINANLMQFYWGGISHPWKIFCNPKSL 413

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +H ++IVGYG E   +GT  P+WI+KNSWG DWGE+
Sbjct: 414 DHGVLIVGYGTE---NGT--PFWIIKNSWGPDWGEE 444



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 19/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLL-RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           F  F+  + + YSS  D    R E F TN +  +     + GTAV+ + KF D+S+ +  
Sbjct: 169 FDMFLEKYPRTYSSSSDEYNERFEIFKTNYQVVQHLNEIERGTAVYGITKFMDMSEEEYH 228

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +         L  IQ       +S + DT              ++P++ DWR  G +++V
Sbjct: 229 RTLAPGFTRPLVPIQT-----LNSAELDTT-------------NIPDSMDWRKHGAVTEV 270

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS  G VE    ++   L  LS Q
Sbjct: 271 KNQGSCGSCWAFSTTGNVEGQWFLKHKKLISLSEQ 305



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 31/52 (59%)

Query: 147 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++P++ DWR  G +++VK QG C  CWAFS  G VE    ++   L  LS Q
Sbjct: 474 NIPDSMDWRKHGAVTEVKNQGSCGSCWAFSTTGNVEGQWFLKHKKLISLSEQ 525


>gi|400180367|gb|AFP73322.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 158/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    + + R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKVERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    + + R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKVERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|225428879|ref|XP_002285299.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 469

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 154/288 (53%), Gaps = 33/288 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+++ +  RR E F  N+   E++ + +  T   G+N+F DL+  + +       D
Sbjct: 61  HGKSYNALGERERRFEIFKDNLRFIEEHNAVNR-TYKVGLNRFADLTNEEYRSRYLGRRD 119

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
            T   ++ S              R     S R G+DLPE+ DWR +G +  VK+QG C  
Sbjct: 120 ETRRGLRAS--------------RVSDRYSFRAGEDLPESVDWREKGAVVPVKDQGNCGS 165

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+NGG+ S
Sbjct: 166 CWAFSTIAAVEGINQIATGDLISLSEQELVDCDKSYNQGCNGGLMDYAFEFIINNGGIDS 225

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           ++ YPY+A+++   C    +    V +  Y  +P  +E  +KK VA + P+SV + A G 
Sbjct: 226 EEDYPYRAADTT--CDPNRKNARVVSIDGYEDVPQNDERSLKKAVANQ-PVSVAIEAGGR 282

Query: 439 FY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            +  Y  GV        L+  +    YGT  S+ YWIV+NSWG +WGE
Sbjct: 283 AFQLYQSGVFTGQCGTQLDHGVVAVGYGTENSVDYWIVRNSWGPNWGE 330



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 15/157 (9%)

Query: 498 LSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPY+A+++   C    +
Sbjct: 186 LISLSEQELVDCDKSYNQGCNGGLMDYAFEFIINNGGIDSEEDYPYRAADTT--CDPNRK 243

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPK 614
               V +  Y  +P  +E  +KK VA + P+SV + A G  +  Y  GV       C  +
Sbjct: 244 NARVVSIDGYEDVPQNDERSLKKAVANQ-PVSVAIEAGGRAFQLYQSGVFTGQ---CGTQ 299

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +H ++ VGYG E      S+ YWIV+NSWG +WGE
Sbjct: 300 L-DHGVVAVGYGTE-----NSVDYWIVRNSWGPNWGE 330



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 32/223 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K Y+++ +  RR E F  N+   E++   +  T    +N+F DL++ + +    
Sbjct: 57  WLVKHGKSYNALGERERRFEIFKDNLRFIEEHNAVNR-TYKVGLNRFADLTNEEYRSRYL 115

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
              D T   ++ S              R     S R G+DLPE+ DWR +G +  VK+QG
Sbjct: 116 GRRDETRRGLRAS--------------RVSDRYSFRAGEDLPESVDWREKGAVVPVKDQG 161

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH---HDKVYSSVED--LLRRHENFVTN-- 220
            C  CWAFS +  VE ++ I   +L  LS Q     DK Y+   +  L+     F+ N  
Sbjct: 162 NCGSCWAFSTIAAVEGINQIATGDLISLSEQELVDCDKSYNQGCNGGLMDYAFEFIINNG 221

Query: 221 -VEKAEDYQSEDSGTA---------VFGVNKFFDLSESDLQQL 253
            ++  EDY    + T          V  ++ + D+ ++D + L
Sbjct: 222 GIDSEEDYPYRAADTTCDPNRKNARVVSIDGYEDVPQNDERSL 264


>gi|357467173|ref|XP_003603871.1| Cysteine proteinase [Medicago truncatula]
 gi|355492919|gb|AES74122.1| Cysteine proteinase [Medicago truncatula]
 gi|388499154|gb|AFK37643.1| unknown [Medicago truncatula]
          Length = 350

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 161/298 (54%), Gaps = 38/298 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K+Y ++E+ L R E F  N++  +D +++       G+N+F DLS  + +
Sbjct: 46  LFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDD-RNKVVSNYWLGLNEFADLSHQEFK 104

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL +D               S + ++    F +  +    DLP++ DWR +G ++ 
Sbjct: 105 NKYLGLKVDL--------------SQRRESSEEEFTYRDV----DLPKSVDWRKKGAVTP 146

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG+C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  +
Sbjct: 147 VKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFSF 206

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I+ NGG+  ++ YPY   ES   C + +E    V +  Y  +P   E+ + K +A + PL
Sbjct: 207 IVKNGGLHKEEDYPYIMEEST--CEMKKEVSEVVTINGYHDVPQNNEQSLLKALANQ-PL 263

Query: 430 SVGMNANG--LFYYSGGVID----------LNQRLYGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV D          ++   YGTS  + Y IVKNSWG+ WGEK
Sbjct: 264 SVAIEASGRDFQFYSGGVFDGHCGSELDHGVSAVGYGTSKGLDYIIVKNSWGAKWGEK 321



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 93/163 (57%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  +I+ NGG+  ++ YPY   ES   C
Sbjct: 171 IVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFSFIVKNGGLHKEEDYPYIMEEST--C 228

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +E    V +  Y  +P   E+ + K +A + PLSV + A+G    +YSGGV D +  
Sbjct: 229 EMKKEVSEVVTINGYHDVPQNNEQSLLKALANQ-PLSVAIEASGRDFQFYSGGVFDGH-- 285

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG  +  D     Y IVKNSWG+ WGEK
Sbjct: 286 -CGSEL-DHGVSAVGYGTSKGLD-----YIIVKNSWGAKWGEK 321



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 20/162 (12%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           ++  +  F ++M  H K+Y ++E+ L R E F  N++  +D  +  S   +  +N+F DL
Sbjct: 40  MDKLIELFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDDRNKVVSNYWL-GLNEFADL 98

Query: 98  SDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           S  + + +  GL +D               S + ++    F +  +    DLP++ DWR 
Sbjct: 99  SHQEFKNKYLGLKVDL--------------SQRRESSEEEFTYRDV----DLPKSVDWRK 140

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +G ++ VK QG+C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 141 KGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 182


>gi|351726954|ref|NP_001236888.1| cysteine proteinase precursor [Glycine max]
 gi|479060|emb|CAA83673.1| cysteine proteinase [Glycine max]
 gi|300507422|gb|ADK24076.1| cysteine proteinase [Glycine max]
 gi|300507425|gb|ADK24077.1| cysteine proteinase [Glycine max]
 gi|1096153|prf||2111244A Cys protease
          Length = 380

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 162/312 (51%), Gaps = 63/312 (20%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TG 255
           ++++ + YS+ E+ LRR   F  N+ +A ++Q+ D  TAV GV +F DL+E + ++L TG
Sbjct: 58  MENYGRSYSTEEEYLRRLGIFAQNMVRAAEHQALDP-TAVHGVTQFSDLTEDEFEKLYTG 116

Query: 256 LN-----LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +N      ++    I P L+                       D LPE FDWR +G +++
Sbjct: 117 VNGGFPSSNNAAGGIAPPLEV----------------------DGLPENFDWREKGAVTE 154

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNGGCNGG 361
           VK QG+C  CWAFS  G +E  + +    L  LS QQL+DCD           + GCNGG
Sbjct: 155 VKLQGRCGSCWAFSTTGSIEGANFLATGKLVSLSEQQLLDCDNKCDITEKTSCDNGCNGG 214

Query: 362 RMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKK 421
            M +A  Y++++GG+  + +YPY     ERG    + E   VK+  ++ IP  +E ++  
Sbjct: 215 LMTNAYNYLLESGGLEEESSYPYTG---ERGECKFDPEKIAVKITNFTNIP-ADENQIAA 270

Query: 422 WVATRGPLSVGMNANGLFYYSGGV----IDLNQRL--------YGT---SI------PYW 460
           ++   GPL++G+NA  +  Y GGV    I   +RL        YG    SI      PYW
Sbjct: 271 YLVKNGPLAMGVNAIFMQTYIGGVSCPLICSKKRLNHGVLLVGYGAKGFSILRLGNKPYW 330

Query: 461 IVKNSWGSDWGE 472
           I+KNSWG  WGE
Sbjct: 331 IIKNSWGEKWGE 342



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 119/235 (50%), Gaps = 35/235 (14%)

Query: 442 SGGVIDLNQRLYGTSIPYWIVKNSWGSDWGEK-------VEDKVGS--SGNRTRDLELTG 492
           +GG    N    G + P  +       DW EK       ++ + GS  + + T  +E   
Sbjct: 118 NGGFPSSNNAAGGIAPPLEVDGLPENFDWREKGAVTEVKLQGRCGSCWAFSTTGSIEGAN 177

Query: 493 VLPS-KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPY 542
            L + KL  L+ ++L+DCD           + GCNGG M +A  Y++++GG+  + +YPY
Sbjct: 178 FLATGKLVSLSEQQLLDCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPY 237

Query: 543 KASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGG 602
                ERG    + E   VK+  ++ IP  +E ++  ++   GPL++G+NA  +  Y GG
Sbjct: 238 TG---ERGECKFDPEKIAVKITNFTNIP-ADENQIAAYLVKNGPLAMGVNAIFMQTYIGG 293

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGE 651
           V      +C+ K  NH +++VGYG +    G SI      PYWI+KNSWG  WGE
Sbjct: 294 VS--CPLICSKKRLNHGVLLVGYGAK----GFSILRLGNKPYWIIKNSWGEKWGE 342



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 29/162 (17%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  FM ++ + YS+ E+ LRR   F  N+ +A ++Q  D  TAV  V +F DL++ + +
Sbjct: 53  KFKVFMENYGRSYSTEEEYLRRLGIFAQNMVRAAEHQALDP-TAVHGVTQFSDLTEDEFE 111

Query: 104 QL-TGLN-----LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           +L TG+N      ++    I P L+                       D LPE FDWR +
Sbjct: 112 KLYTGVNGGFPSSNNAAGGIAPPLEV----------------------DGLPENFDWREK 149

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           G +++VK QG+C  CWAFS  G +E  + +    L  LS Q 
Sbjct: 150 GAVTEVKLQGRCGSCWAFSTTGSIEGANFLATGKLVSLSEQQ 191


>gi|350421176|ref|XP_003492760.1| PREDICTED: hypothetical protein LOC100745708 [Bombus impatiens]
          Length = 884

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 155/310 (50%), Gaps = 45/310 (14%)

Query: 187 IQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           I+   L E  ++   K Y+S ++ L R + F  N++  E+ Q+ + GTA +GV  F DL+
Sbjct: 573 IKDETLFEAFIKKFGKTYNSADEKLDRFKIFKQNLKIIEELQTFERGTAEYGVTMFADLT 632

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
             + + +  GL  +   E+  P  +A                        LP  FDWR  
Sbjct: 633 PKEFKARYLGLRPELKHENEIPLPEAEIPD------------------VSLPLKFDWRDH 674

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDD 365
            V++ VK+QG+C  CWAFS  G VE  +AI+ N L  LS Q+LVDCD  + GCNGG M++
Sbjct: 675 SVVTPVKDQGQCGSCWAFSVTGNVEGQYAIKHNQLLSLSEQELVDCDSLDEGCNGGDMEN 734

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
           A + I   GG+  +  YPY A + +   L   +   KV+V     I   +E+ M +W+  
Sbjct: 735 AYKAIERLGGLELESDYPYDAKDEKCHFL---QNKAKVQVVSAVNI-TSDEKRMAQWLVK 790

Query: 426 RGPLSVGMNANGLFYYSGGVI-DLN---------------------QRLYGTSIPYWIVK 463
            GP+SVG+NAN + +Y GGV   LN                       L+   +PYWI+K
Sbjct: 791 NGPISVGINANAMQFYFGGVSHPLNFLCNPKNLDHGVLIVGYGISKYPLFHKELPYWIIK 850

Query: 464 NSWGSDWGEK 473
           NSWG  WGE+
Sbjct: 851 NSWGPRWGER 860



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 5/158 (3%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++LVDCD  + GCNGG M++A + I   GG+  +  YPY A + +   L   
Sbjct: 707 NQLLSLSEQELVDCDSLDEGCNGGDMENAYKAIERLGGLELESDYPYDAKDEKCHFL--- 763

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
           +   KV+V     I   +E+ M +W+   GP+SVG+NAN + +Y GGV      LCNPK 
Sbjct: 764 QNKAKVQVVSAVNI-TSDEKRMAQWLVKNGPISVGINANAMQFYFGGVSHPLNFLCNPKN 822

Query: 616 QNHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H ++IVGYG  +       +PYWI+KNSWG  WGE+
Sbjct: 823 LDHGVLIVGYGISKYPLFHKELPYWIIKNSWGPRWGER 860



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 19/157 (12%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           T F  F++   K Y+S ++ L R + F  N++  E+ Q  + GTA + V  F DL+  + 
Sbjct: 577 TLFEAFIKKFGKTYNSADEKLDRFKIFKQNLKIIEELQTFERGTAEYGVTMFADLTPKEF 636

Query: 103 Q-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
           + +  GL  +   E+  P  +A                        LP  FDWR   V++
Sbjct: 637 KARYLGLRPELKHENEIPLPEAEIPD------------------VSLPLKFDWRDHSVVT 678

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG+C  CWAFS  G VE  +AI+ N L  LS Q
Sbjct: 679 PVKDQGQCGSCWAFSVTGNVEGQYAIKHNQLLSLSEQ 715


>gi|413917937|gb|AFW57869.1| hypothetical protein ZEAMMB73_830006 [Zea mays]
          Length = 443

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 159/295 (53%), Gaps = 34/295 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGV--NKFFDLSESDLQQLT 254
           +  +D+VYS   +  RR E F  N+   E   S ++G   F +  N+F DL++ + +   
Sbjct: 45  MAKYDRVYSDAAEKARRFEVFKANMALIE---SVNAGNHKFWLEANRFADLTDDEFR--- 98

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
                +T    +P   A  S  ++ T    F++ ++   DD+P + DWR +G ++ +K Q
Sbjct: 99  -----ATWTGYRPKTAAASSKGRSRTATTGFKYANVSL-DDVPASVDWRTKGAVTPIKNQ 152

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIID 372
           G+C CCWAFSAV  +E +  +    L  LS Q+LVDCD++  + GC GG MDDA  +I+ 
Sbjct: 153 GECGCCWAFSAVASMEGVVKLSTGKLVSLSEQELVDCDVNGMDQGCEGGEMDDAFDFIVG 212

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ ++  YPY AS+    C   E  G    +K Y  +P  +E  ++K VA + P+SV 
Sbjct: 213 NGGLTTESRYPYTASDGT--CNSNEASGDAASIKGYEDVPANDEASLRKAVANQ-PVSVA 269

Query: 433 MNA--NGLFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           ++   +   +Y GGV+      +L+  +    YG +     YW++KNSWG+ WGE
Sbjct: 270 VDGGDSHFRFYKGGVLSGACGTELDHGIAAVGYGVASDGTKYWVMKNSWGTSWGE 324



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 91/159 (57%), Gaps = 15/159 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD++  + GC GG MDDA  +I+ NGG+ ++  YPY AS+    C   
Sbjct: 177 KLVSLSEQELVDCDVNGMDQGCEGGEMDDAFDFIVGNGGLTTESRYPYTASDGT--CNSN 234

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
           E  G    +K Y  +P  +E  ++K VA + P+SV ++   +   +Y GGV+      C 
Sbjct: 235 EASGDAASIKGYEDVPANDEASLRKAVANQ-PVSVAVDGGDSHFRFYKGGVL---SGACG 290

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +  +H +  VGYG     DGT   YW++KNSWG+ WGE
Sbjct: 291 TE-LDHGIAAVGYG--VASDGT--KYWVMKNSWGTSWGE 324



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 14/159 (8%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF--EVNKFFDLSD 99
           V R   +M  +D+VYS   +  RR E F  N+   E     ++G   F  E N+F DL+D
Sbjct: 38  VARHEEWMAKYDRVYSDAAEKARRFEVFKANMALIESV---NAGNHKFWLEANRFADLTD 94

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
            + +        +T    +P   A  S  ++ T    F++ ++   DD+P + DWR +G 
Sbjct: 95  DEFR--------ATWTGYRPKTAAASSKGRSRTATTGFKYANVSL-DDVPASVDWRTKGA 145

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ +K QG+C CCWAFSAV  +E +  +    L  LS Q
Sbjct: 146 VTPIKNQGECGCCWAFSAVASMEGVVKLSTGKLVSLSEQ 184


>gi|1046373|gb|AAC49135.1| SAG12 protein [Arabidopsis thaliana]
          Length = 346

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/308 (35%), Positives = 157/308 (50%), Gaps = 41/308 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG-TAVFGVNKFFDLSESDLQQL-TGLN 257
           H +VY+ V++   R+  F  NVE+ E   S  +G T    VN+F DL+  +   + TG  
Sbjct: 45  HGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTNDEFCSMYTGFK 104

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             S L            S+Q+ T+M  F++ ++  G  LP + DWR +G ++ +K QG C
Sbjct: 105 GVSAL------------SSQSQTKMSPFRYQNVSSGA-LPVSVDWRKKGAVTPIKNQGSC 151

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
            CCWAFSAV  +E    I+   L  LS QQLVDCD ++ GC GG MD A ++I   GG+ 
Sbjct: 152 GCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTNDFGCEGGLMDTAFEHIKATGGLT 211

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++  YPYK  ++   C   +       +  Y  +P  +E+ + K VA + P+SVG+   G
Sbjct: 212 TESDYPYKGEDAT--CNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQ-PVSVGIEGGG 268

Query: 438 --LFYYSGGVID------LNQRL----YGTSI---PYWIVKNSWGSDWGEK--------V 474
               +YS GV        L+  +    YG S     YWI+KNSWG+ WGE         V
Sbjct: 269 FDFQFYSSGVFTGECTTYLDHAVTAIGYGESTNGSKYWIIKNSWGTKWGESGYMRIQKDV 328

Query: 475 EDKVGSSG 482
           +DK G  G
Sbjct: 329 KDKQGLCG 336



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 13/163 (7%)

Query: 491 TGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           T +   KL  L+ ++LVDCD ++ GC GG MD A ++I   GG+ ++  YPYK  ++   
Sbjct: 167 TQIKKGKLISLSEQQLVDCDTNDFGCEGGLMDTAFEHIKATGGLTTESDYPYKGEDAT-- 224

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
           C   +       +  Y  +P  +E+ + K VA + P+SVG+   G    +YS GV     
Sbjct: 225 CNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQ-PVSVGIEGGGFDFQFYSSGVFTGE- 282

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C     +HA+  +GYGE          YWI+KNSWG+ WGE
Sbjct: 283 --CTTYL-DHAVTAIGYGESTNGS----KYWIIKNSWGTKWGE 318



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 25/196 (12%)

Query: 13  GLGYLHTFMIKVALLESNIFQTRGYLNSPV-------TRFLNFMRDHDKVYSSVEDLLRR 65
            L ++  F+  VA+  S  F     L+ P+        R + +M  H +VY+ V++   R
Sbjct: 2   ALKHMQIFLF-VAIFSSFCFSIT--LSRPLDNELIMQKRHIEWMTKHGRVYADVKEENNR 58

Query: 66  HENFVTNVEKAEDYQREDSG-TAVFEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQPSLQA 123
           +  F  NVE+ E      +G T    VN+F DL++ +   + TG    S L         
Sbjct: 59  YVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTNDEFCSMYTGFKGVSAL--------- 109

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
              S+Q+ T+M  F++ ++  G  LP + DWR +G ++ +K QG C CCWAFSAV  +E 
Sbjct: 110 ---SSQSQTKMSPFRYQNVSSGA-LPVSVDWRKKGAVTPIKNQGSCGCCWAFSAVAAIEG 165

Query: 184 MHAIQGNNLTELSVQH 199
              I+   L  LS Q 
Sbjct: 166 ATQIKKGKLISLSEQQ 181


>gi|195111686|ref|XP_002000409.1| GI10216 [Drosophila mojavensis]
 gi|193917003|gb|EDW15870.1| GI10216 [Drosophila mojavensis]
          Length = 605

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 153/301 (50%), Gaps = 43/301 (14%)

Query: 195 LSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLT 254
             +++  +  +S+E  +R    F  N+   ++    + G+A +G+ +F D++ S+  Q  
Sbjct: 302 FQIKYKRRYANSMEHQMRL-RIFRQNLRTIQELNDNEQGSAKYGITEFADMTSSEYTQRA 360

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
           GL         Q S   P                   +  +LP+ FDWR +  +++VK Q
Sbjct: 361 GL--------WQRSANKPTGGKPAVVPA---------YKGELPKEFDWREKNAVTQVKNQ 403

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNG 374
           G C  CWAFS  G +E ++AI+   L E S Q+L+DCD ++  CNGG MD+A + I D G
Sbjct: 404 GSCGSCWAFSVTGNIEGLYAIKTGELREFSEQELLDCDSTDSACNGGLMDNAYKAIKDIG 463

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+  +  YPY A + +  C   +     V+V ++  +P G E  M++W+   GP+S+G+N
Sbjct: 464 GLEYESEYPYLAKKKQ--CHFNKTLS-HVQVADFVDLPKGNETAMQEWLLANGPISIGLN 520

Query: 435 ANGLFYYSGGVI----------DLNQRL----YGTS--------IPYWIVKNSWGSDWGE 472
           AN + +Y GGV           +L+  +    YG S        +PYWIVKNSWG  WGE
Sbjct: 521 ANAMQFYRGGVSHPWGPLCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGE 580

Query: 473 K 473
           +
Sbjct: 581 Q 581



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 98/164 (59%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  +   +L   + ++L+DCD ++  CNGG MD+A + I D GG+  +  YPY A + + 
Sbjct: 421 LYAIKTGELREFSEQELLDCDSTDSACNGGLMDNAYKAIKDIGGLEYESEYPYLAKKKQ- 479

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C   +     V+V ++  +P G E  M++W+   GP+S+G+NAN + +Y GGV      
Sbjct: 480 -CHFNKTLS-HVQVADFVDLPKGNETAMQEWLLANGPISIGLNANAMQFYRGGVSHPWGP 537

Query: 610 LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H ++IVGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 538 LCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 581



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 17/161 (10%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           LN     F  F   + + Y++  +   R   F  N+   ++    + G+A + + +F D+
Sbjct: 292 LNKVDHLFHVFQIKYKRRYANSMEHQMRLRIFRQNLRTIQELNDNEQGSAKYGITEFADM 351

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           + S+  Q  GL         Q S   P                   +  +LP+ FDWR +
Sbjct: 352 TSSEYTQRAGL--------WQRSANKPTGGKPAVVPA---------YKGELPKEFDWREK 394

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             +++VK QG C  CWAFS  G +E ++AI+   L E S Q
Sbjct: 395 NAVTQVKNQGSCGSCWAFSVTGNIEGLYAIKTGELREFSEQ 435


>gi|255555337|ref|XP_002518705.1| cysteine protease, putative [Ricinus communis]
 gi|223542086|gb|EEF43630.1| cysteine protease, putative [Ricinus communis]
          Length = 471

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 172/333 (51%), Gaps = 46/333 (13%)

Query: 188 QGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSE 247
           Q   + E+ +  H K Y+++ +  +R E F  N+   +++ S D    V G+N+F DL+ 
Sbjct: 46  QVRRMYEMWLVEHGKAYNALGEKEKRFEIFKDNLRFIDEHNSVDRSYKV-GLNRFADLTN 104

Query: 248 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH----GDDLPEAFDWR 303
            + + +                   F   + + + R     S R+    GDDLPE  DWR
Sbjct: 105 EEYKAM-------------------FLGTKMERKNRFLGTRSQRYLFKDGDDLPENVDWR 145

Query: 304 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGR 362
            +G +  VK+QG+C  CWAFS VG VE ++ I    L  LS Q+LVDCD S N GCNGG 
Sbjct: 146 EKGAVVPVKDQGQCGSCWAFSTVGAVEGINQIVTGELISLSEQELVDCDKSYNQGCNGGL 205

Query: 363 MDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKW 422
           MD A ++II+NGG+ +++ YPYKAS++   C    +    V +  Y  +P  +E  +KK 
Sbjct: 206 MDYAFEFIINNGGIDTEEDYPYKASDNI--CDPNRKNAKVVTIDGYEDVPENDENSLKKA 263

Query: 423 VATRGPLSVGMNANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGS 468
           VA + P+SV + A G  +  Y  GV       +L+  +    YGT   + YWIV+NSWGS
Sbjct: 264 VAHQ-PVSVAIEAGGRAFQLYKSGVFTGRCGTELDHGVVAVGYGTENGVNYWIVRNSWGS 322

Query: 469 DWGE----KVEDKVGSSGNRTRDLELTGVLPSK 497
            WGE    ++E  V ++      + +    P+K
Sbjct: 323 AWGESGYIRMERNVANTKTGKCGIAIQPSYPTK 355



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 94/162 (58%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  +L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +++ YPYKAS++   C
Sbjct: 177 IVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFEFIINNGGIDTEEDYPYKASDNI--C 234

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P  +E  +KK VA + P+SV + A G  +  Y  GV      
Sbjct: 235 DPNRKNAKVVTIDGYEDVPENDENSLKKAVAHQ-PVSVAIEAGGRAFQLYKSGVF---TG 290

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C  +  +H ++ VGYG E       + YWIV+NSWGS WGE
Sbjct: 291 RCGTEL-DHGVVAVGYGTE-----NGVNYWIVRNSWGSAWGE 326



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 45/255 (17%)

Query: 24  VALLESNIFQTRGY---LNSPVTRFLN-FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           +++++ NI     Y    +S V R    ++ +H K Y+++ +  +R E F  N+   +++
Sbjct: 26  MSIVDYNIKHGTKYPLRTDSQVRRMYEMWLVEHGKAYNALGEKEKRFEIFKDNLRFIDEH 85

Query: 80  QREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF 139
              D    V  +N+F DL++ + + +                   F   + + + R    
Sbjct: 86  NSVDRSYKV-GLNRFADLTNEEYKAM-------------------FLGTKMERKNRFLGT 125

Query: 140 NSLRH----GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTEL 195
            S R+    GDDLPE  DWR +G +  VK+QG+C  CWAFS VG VE ++ I    L  L
Sbjct: 126 RSQRYLFKDGDDLPENVDWREKGAVVPVKDQGQCGSCWAFSTVGAVEGINQIVTGELISL 185

Query: 196 SVQH---HDKVYSSVED--LLRRHENFVTN---VEKAEDYQSEDS---------GTAVFG 238
           S Q     DK Y+   +  L+     F+ N   ++  EDY  + S            V  
Sbjct: 186 SEQELVDCDKSYNQGCNGGLMDYAFEFIINNGGIDTEEDYPYKASDNICDPNRKNAKVVT 245

Query: 239 VNKFFDLSESDLQQL 253
           ++ + D+ E+D   L
Sbjct: 246 IDGYEDVPENDENSL 260


>gi|403183546|gb|EJY58173.1| AAEL017153-PA [Aedes aegypti]
          Length = 1165

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 150/296 (50%), Gaps = 41/296 (13%)

Query: 200  HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
            H + Y S  +   R   F  N+ K E     + GTA +G+  F D++ ++ +Q TGL + 
Sbjct: 865  HSREYQSTLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYGITHFADMTSAEYRQRTGLVIP 924

Query: 260  STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
               ++ +  +  P +  + D  M            +LPE+FDWR  G +S VK QG C  
Sbjct: 925  R--DEDRNHVGNPKA--EIDENM------------ELPESFDWRELGAVSPVKNQGNCGS 968

Query: 320  CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
            CWAFS VG +E +H I+   L E S Q+L+DCD  +  C GG MDDA + I   GG+  +
Sbjct: 969  CWAFSVVGNIEGLHQIKTKVLEEYSEQELLDCDAVDSACQGGYMDDAYKAIEKIGGLELE 1028

Query: 380  QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
              YPY A + ++ C     E   V+VK    +P   E  M +++   GP+S+G+NAN + 
Sbjct: 1029 SEYPYLA-KKQKTCHFNSTE-VHVRVKGAVDLP-KNETAMAQYLVANGPISIGLNANAMQ 1085

Query: 440  YYSGGVI----------DLNQ------------RLYGTSIPYWIVKNSWGSDWGEK 473
            +Y GG+           +L+              ++  ++PYWIVKNSWG  WGE+
Sbjct: 1086 FYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEYPMFNKTMPYWIVKNSWGPKWGEQ 1141



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 4/156 (2%)

Query: 498  LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
            L   + ++L+DCD  +  C GG MDDA + I   GG+  +  YPY A + ++ C     E
Sbjct: 989  LEEYSEQELLDCDAVDSACQGGYMDDAYKAIEKIGGLELESEYPYLAKK-QKTCHFNSTE 1047

Query: 558  GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
               V+VK    +P   E  M +++   GP+S+G+NAN + +Y GG+    + LC+ K  +
Sbjct: 1048 -VHVRVKGAVDLP-KNETAMAQYLVANGPISIGLNANAMQFYRGGISHPWKPLCSKKNLD 1105

Query: 618  HALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
            H ++IVGYG +E      ++PYWIVKNSWG  WGE+
Sbjct: 1106 HGVLIVGYGVKEYPMFNKTMPYWIVKNSWGPKWGEQ 1141



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 16/154 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F   H + Y S  +   R   F  N+ K E   + + GTA + +  F D++ ++ +Q
Sbjct: 858 FEKFKLKHSREYQSTLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYGITHFADMTSAEYRQ 917

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TGL +    ++ +  +  P +  + D  M            +LPE+FDWR  G +S VK
Sbjct: 918 RTGLVIPR--DEDRNHVGNPKA--EIDENM------------ELPESFDWRELGAVSPVK 961

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS VG +E +H I+   L E S Q
Sbjct: 962 NQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQ 995


>gi|400180377|gb|AFP73327.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 158/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y+    E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYQG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 90/160 (56%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y+    E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYQG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPELSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|37780039|gb|AAP32192.1| cysteine protease 14 [Trifolium repens]
          Length = 351

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/298 (36%), Positives = 161/298 (54%), Gaps = 37/298 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K+Y ++E+ L R E F  N++  +D +++       G+N+F DLS  + +
Sbjct: 46  LFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDD-RNKIVSNYWLGLNEFADLSHQEFK 104

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL +D +        Q   SSN+ +   R           DLP++ DWR +G ++ 
Sbjct: 105 NKYLGLKVDLS--------QRRESSNEEEFTYRDV---------DLPKSVDWRKKGAVTP 147

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG+C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  +
Sbjct: 148 VKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFSF 207

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I  NGG+  ++ YPY   ES   C + +EE   V +  Y  +P   E+ + K +A + PL
Sbjct: 208 IGQNGGLHKEEDYPYIMEEST--CEMKKEETQVVTINGYHDVPQNNEQSLLKALANQ-PL 264

Query: 430 SVGMNANG--LFYYSGGVID----------LNQRLYGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+     +YSGGV D          ++   YGTS  + Y IVKNSWG+ WGEK
Sbjct: 265 SVAIEASSRDFQFYSGGVFDGHCGSDLDHGVSAVGYGTSKNLDYIIVKNSWGAKWGEK 322



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  +I  NGG+  ++ YPY   ES   C
Sbjct: 172 IVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFSFIGQNGGLHKEEDYPYIMEEST--C 229

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +EE   V +  Y  +P   E+ + K +A + PLSV + A+     +YSGGV D +  
Sbjct: 230 EMKKEETQVVTINGYHDVPQNNEQSLLKALANQ-PLSVAIEASSRDFQFYSGGVFDGH-- 286

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H +  VGYG  +  D     Y IVKNSWG+ WGEK
Sbjct: 287 -CGSDL-DHGVSAVGYGTSKNLD-----YIIVKNSWGAKWGEK 322



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 19/162 (11%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           ++  +  F ++M  H K+Y ++E+ L R E F  N++  +D  +  S   +  +N+F DL
Sbjct: 40  MDKLIELFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDDRNKIVSNYWL-GLNEFADL 98

Query: 98  SDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           S  + + +  GL +D +        Q   SSN+ +   R           DLP++ DWR 
Sbjct: 99  SHQEFKNKYLGLKVDLS--------QRRESSNEEEFTYRDV---------DLPKSVDWRK 141

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +G ++ VK QG+C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 142 KGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 183


>gi|356576257|ref|XP_003556249.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase 15A-like
           [Glycine max]
          Length = 374

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 160/307 (52%), Gaps = 58/307 (18%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TG 255
           ++++ + YS+ E+ LRR   F  N+ +A ++Q+ D  TAV GV +F DL+E + ++L TG
Sbjct: 58  MENYGRSYSTREEYLRRLGIFSQNMLRAAEHQALDP-TAVHGVTQFSDLTEVEFEKLYTG 116

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
               +T   + P L+                       + LPE FDWR +G +++VK QG
Sbjct: 117 XPSTNTAGGVAPPLEV----------------------EGLPENFDWREKGAVTEVKIQG 154

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNGGCNGGRMDDA 366
           +C  CWAFS  G +E  + +    L  LS QQL+DCD           + GCNGG M +A
Sbjct: 155 RCGSCWAFSTTGSIEGANFLATGKLVSLSEQQLLDCDNKCEITEKTSCDNGCNGGLMTNA 214

Query: 367 LQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATR 426
             Y++++GG+  + +YPY     ERG    + E   V++  ++ IP  +E ++  ++   
Sbjct: 215 YNYLLESGGLEEESSYPYTG---ERGECKFDPEKITVRITNFTNIPV-DENQIAAYLVKN 270

Query: 427 GPLSVGMNANGLFYYSGGV----IDLNQRL--------YGT---SI------PYWIVKNS 465
           GPL++G+NA  +  Y GGV    I   +RL        YG    SI      PYWI+KNS
Sbjct: 271 GPLAMGVNAIFMQTYIGGVSCPLICSKKRLNHGVLLVGYGAKGFSILRLGNKPYWIIKNS 330

Query: 466 WGSDWGE 472
           WG  WGE
Sbjct: 331 WGKKWGE 337



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 35/208 (16%)

Query: 469 DWGEK-------VEDKVGS--SGNRTRDLELTGVLPS-KLSRLATEKLVDCD-------- 510
           DW EK       ++ + GS  + + T  +E    L + KL  L+ ++L+DCD        
Sbjct: 140 DWREKGAVTEVKIQGRCGSCWAFSTTGSIEGANFLATGKLVSLSEQQLLDCDNKCEITEK 199

Query: 511 -MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI 569
              + GCNGG M +A  Y++++GG+  + +YPY     ERG    + E   V++  ++ I
Sbjct: 200 TSCDNGCNGGLMTNAYNYLLESGGLEEESSYPYTG---ERGECKFDPEKITVRITNFTNI 256

Query: 570 PYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEE 629
           P  +E ++  ++   GPL++G+NA  +  Y GGV      +C+ K  NH +++VGYG + 
Sbjct: 257 PV-DENQIAAYLVKNGPLAMGVNAIFMQTYIGGVS--CPLICSKKRLNHGVLLVGYGAK- 312

Query: 630 KKDGTSI------PYWIVKNSWGSDWGE 651
              G SI      PYWI+KNSWG  WGE
Sbjct: 313 ---GFSILRLGNKPYWIIKNSWGKKWGE 337



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 24/157 (15%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  FM ++ + YS+ E+ LRR   F  N+ +A ++Q  D  TAV  V +F DL++ + +
Sbjct: 53  KFKVFMENYGRSYSTREEYLRRLGIFSQNMLRAAEHQALDP-TAVHGVTQFSDLTEVEFE 111

Query: 104 QL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +L TG    +T   + P L+                       + LPE FDWR +G +++
Sbjct: 112 KLYTGXPSTNTAGGVAPPLEV----------------------EGLPENFDWREKGAVTE 149

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK QG+C  CWAFS  G +E  + +    L  LS Q 
Sbjct: 150 VKIQGRCGSCWAFSTTGSIEGANFLATGKLVSLSEQQ 186


>gi|312281697|dbj|BAJ33714.1| unnamed protein product [Thellungiella halophila]
          Length = 347

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 160/308 (51%), Gaps = 41/308 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG-TAVFGVNKFFDLSESDLQQL-TGLN 257
           H +VY+ +++   R+  F  NVE+ E   +  +G T    VN+F DL+  + + + TG  
Sbjct: 46  HGRVYADMKEKNNRYVVFKRNVERIERLNNVPAGRTFKLAVNQFADLTNDEFRSMYTGYK 105

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             S L            S+Q+ T+  +F++ ++  G  LP + DWR +G ++ +K QG C
Sbjct: 106 GGSVL------------SSQSGTKTSSFRYQNVSSGA-LPVSVDWRKKGAVTPIKNQGTC 152

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
            CCWAFSAV  +E    I+   L  LS QQLVDCD ++ GC+GG MD A ++I+  GG+ 
Sbjct: 153 GCCWAFSAVAAIEGATKIKKGKLISLSEQQLVDCDTNDFGCSGGLMDTAFEHIMATGGLT 212

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++  YPYK  ++   C +   +     +  Y  +P  +E+ + K VA + P+S+G+   G
Sbjct: 213 TESNYPYKGKDAT--CKIKNTKPTATSITGYEDVPVNDEKALMKAVAHQ-PVSIGIEGGG 269

Query: 438 --LFYYSGGVID------LNQRL----YGTS---IPYWIVKNSWGSDWGEK--------V 474
               +Y  GV        L+  +    YG S     YWI+KNSWG+ WGE         V
Sbjct: 270 FDFQFYGSGVFTGECTTYLDHAVTAVGYGQSSNGSKYWIIKNSWGTKWGESGYMRIKKDV 329

Query: 475 EDKVGSSG 482
           +DK G  G
Sbjct: 330 KDKKGLCG 337



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 13/163 (7%)

Query: 491 TGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           T +   KL  L+ ++LVDCD ++ GC+GG MD A ++I+  GG+ ++  YPYK  ++   
Sbjct: 168 TKIKKGKLISLSEQQLVDCDTNDFGCSGGLMDTAFEHIMATGGLTTESNYPYKGKDAT-- 225

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
           C +   +     +  Y  +P  +E+ + K VA + P+S+G+   G    +Y  GV     
Sbjct: 226 CKIKNTKPTATSITGYEDVPVNDEKALMKAVAHQ-PVSIGIEGGGFDFQFYGSGVFTGE- 283

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C     +HA+  VGYG+          YWI+KNSWG+ WGE
Sbjct: 284 --CTTYL-DHAVTAVGYGQSSNGS----KYWIIKNSWGTKWGE 319



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 15/158 (9%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSG-TAVFEVNKFFDLSDSDL 102
           R   +M  H +VY+ +++   R+  F  NVE+ E      +G T    VN+F DL++ + 
Sbjct: 38  RHDEWMAKHGRVYADMKEKNNRYVVFKRNVERIERLNNVPAGRTFKLAVNQFADLTNDEF 97

Query: 103 QQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
           + + TG    S L            S+Q+ T+  +F++ ++  G  LP + DWR +G ++
Sbjct: 98  RSMYTGYKGGSVL------------SSQSGTKTSSFRYQNVSSGA-LPVSVDWRKKGAVT 144

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +K QG C CCWAFSAV  +E    I+   L  LS Q 
Sbjct: 145 PIKNQGTCGCCWAFSAVAAIEGATKIKKGKLISLSEQQ 182


>gi|449448298|ref|XP_004141903.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
 gi|449531757|ref|XP_004172852.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
          Length = 365

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 160/299 (53%), Gaps = 38/299 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           + +L +  H K Y+ +++  +R + F  N++  +D+ SE+  T   G+N F DL+    +
Sbjct: 34  IYDLWLAKHGKAYNGIDEREKRFQIFKENLKFIDDHNSENR-TYKVGLNMFADLTN---E 89

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
           +   L L +     +  ++A  +S       R +  N+L   D LPE+ DWR  G ++ V
Sbjct: 90  EYRALYLGTRSPPARRVMKAKTAS-------RRYAVNNL---DRLPESMDWRTRGAVAPV 139

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYI 370
           K QG C  CWAFS +  VE ++ I    L  LS Q+LV CD   N GCNGG MD A Q+I
Sbjct: 140 KNQGSCGSCWAFSTIAAVEGINQIVTGELISLSEQELVSCDKKYNSGCNGGLMDYAFQFI 199

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           IDNGG+ +++ YPY+A + +  C    +    V +  Y  +P  +EE +KK VA + P+S
Sbjct: 200 IDNGGLDTEEDYPYEAFDGQ--CDPTRKNAKVVSIDAYEDVPANDEESLKKAVAHQ-PVS 256

Query: 431 VGMNANGL---FYYSG------------GVIDLNQRLYG--TSIPYWIVKNSWGSDWGE 472
           V + A+GL    Y SG            GV+ +    YG    + YW+V+NSWG+ WGE
Sbjct: 257 VAIEASGLALQLYQSGVFTGKCGSALDHGVVAVG---YGKENGVDYWLVRNSWGTSWGE 312



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 94/162 (58%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  +L  L+ ++LV CD   N GCNGG MD A Q+IIDNGG+ +++ YPY+A + +  C
Sbjct: 163 IVTGELISLSEQELVSCDKKYNSGCNGGLMDYAFQFIIDNGGLDTEEDYPYEAFDGQ--C 220

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQR 609
               +    V +  Y  +P  +EE +KK VA + P+SV + A+GL    Y  GV      
Sbjct: 221 DPTRKNAKVVSIDAYEDVPANDEESLKKAVAHQ-PVSVAIEASGLALQLYQSGVFTGK-- 277

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H ++ VGYG+E   D     YW+V+NSWG+ WGE
Sbjct: 278 -CG-SALDHGVVAVGYGKENGVD-----YWLVRNSWGTSWGE 312



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 17/162 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K Y+ +++  +R + F  N++  +D+  E+  T    +N F DL++   ++   
Sbjct: 38  WLAKHGKAYNGIDEREKRFQIFKENLKFIDDHNSENR-TYKVGLNMFADLTN---EEYRA 93

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           L L +     +  ++A  +S       R +  N+L   D LPE+ DWR  G ++ VK QG
Sbjct: 94  LYLGTRSPPARRVMKAKTAS-------RRYAVNNL---DRLPESMDWRTRGAVAPVKNQG 143

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQHH---DKVYSS 206
            C  CWAFS +  VE ++ I    L  LS Q     DK Y+S
Sbjct: 144 SCGSCWAFSTIAAVEGINQIVTGELISLSEQELVSCDKKYNS 185


>gi|289740839|gb|ADD19167.1| cysteine proteinase cathepsin F [Glossina morsitans morsitans]
          Length = 471

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 142/293 (48%), Gaps = 47/293 (16%)

Query: 204 YSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL-NLDSTL 262
           Y +  +   R   F  N++  E+    + G+A +G+ +F D++  + +Q TGL   D   
Sbjct: 177 YHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYGITEFADMTSPEYKQRTGLWQRDPQK 236

Query: 263 EDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWA 322
               P  + P                      DLP+ FDWR +G IS VK QG C  CWA
Sbjct: 237 AASNPKAEIP--------------------NIDLPKEFDWREKGAISAVKNQGNCGSCWA 276

Query: 323 FSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAY 382
           FS  G +E +HA++   L + S Q+L+DCD S+  CNGG  D+A + I   GG+  +  Y
Sbjct: 277 FSVTGNIEGLHAVRTGVLEQYSEQELLDCDTSDSACNGGLPDNAYEAIEKIGGLELESDY 336

Query: 383 PYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYS 442
           PY A + +  C     +   VKVK +  +P   E  + +W+   GP+S+G+NAN + +Y 
Sbjct: 337 PYHARKDQ--CHFNSTK-IHVKVKGHVDLP-KNETAIAQWLIANGPISIGINANAMQFYR 392

Query: 443 GGVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWGEK 473
           GGV      L              YG S        +PYWIVKNSWG  WGE+
Sbjct: 393 GGVSHPPHILCSRKNLDHGVLIVGYGVSDYPMFKKTLPYWIVKNSWGKKWGEQ 445



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 93/164 (56%), Gaps = 5/164 (3%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  V    L + + ++L+DCD S+  CNGG  D+A + I   GG+  +  YPY A + + 
Sbjct: 286 LHAVRTGVLEQYSEQELLDCDTSDSACNGGLPDNAYEAIEKIGGLELESDYPYHARKDQ- 344

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C     +   VKVK +  +P   E  + +W+   GP+S+G+NAN + +Y GGV      
Sbjct: 345 -CHFNSTK-IHVKVKGHVDLP-KNETAIAQWLIANGPISIGINANAMQFYRGGVSHPPHI 401

Query: 610 LCNPKAQNHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H ++IVGYG  +      ++PYWIVKNSWG  WGE+
Sbjct: 402 LCSRKNLDHGVLIVGYGVSDYPMFKKTLPYWIVKNSWGKKWGEQ 445



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 21/162 (12%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           LN     F  F     + Y +  +   R   F  N++  E+  R + G+A + + +F D+
Sbjct: 159 LNKVEHLFAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYGITEFADM 218

Query: 98  SDSDLQQLTGL-NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           +  + +Q TGL   D       P  + P                      DLP+ FDWR 
Sbjct: 219 TSPEYKQRTGLWQRDPQKAASNPKAEIP--------------------NIDLPKEFDWRE 258

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +G IS VK QG C  CWAFS  G +E +HA++   L + S Q
Sbjct: 259 KGAISAVKNQGNCGSCWAFSVTGNIEGLHAVRTGVLEQYSEQ 300


>gi|400180419|gb|AFP73348.1| cysteine protease [Solanum lycopersicoides]
          Length = 343

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 157/294 (53%), Gaps = 34/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDL-SESDLQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D+ SE  L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGINEFADITSEEFLTK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TG+N+ S L    PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGINIPSYLS---PS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 145

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 146 NQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 205

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S+  Y Y+    ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 206 NGGISSESDYEYQG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 260

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 261 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 314



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+ S+  Y Y+    ++   
Sbjct: 168 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISSESDYEYQG---QQYTC 224

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 225 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 279

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 280 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 314



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 15/152 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLT 106
           +M  H +VY    +   R   F  N++  E   +  + +    +N+F D++  + L + T
Sbjct: 42  WMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGINEFADITSEEFLTKFT 101

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           G+N+ S L    PS   P SS +       F+ N L   DD+P   DWR  G +++VK Q
Sbjct: 102 GINIPSYLS---PS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVKNQ 147

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G+C CCWAFSAVG +E  + I   NL E S Q
Sbjct: 148 GQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQ 179


>gi|156142226|gb|ABU51882.1| ervatamin-C precursor [Tabernaemontana divaricata]
          Length = 365

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/292 (34%), Positives = 157/292 (53%), Gaps = 30/292 (10%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           + EL +  HDKVYS + +  +R E F  N++  +++ SE+  T   G+  + DL+  + Q
Sbjct: 44  IYELWLAKHDKVYSGLVEYEKRFEIFKDNLKFIDEHNSENH-TYKMGLTPYTDLTNEEFQ 102

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
            +       T+  ++ ++          +E  A++      GD+LPE  DWR +G ++ V
Sbjct: 103 AIYLGTRSDTIHRLKRTINI--------SERYAYE-----AGDNLPEQIDWRKKGAVTPV 149

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII 371
           K QGKC  CWAFS V  VE+++ I+  +L  LS QQLVDC+  N GC GG    A QYII
Sbjct: 150 KNQGKCGSCWAFSTVSTVESINQIRTGNLISLSEQQLVDCNKKNHGCKGGAFVYAYQYII 209

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           DNGG+ ++  YPYKA +    C   ++    V++  Y  +P+  E  +KK VA++ P  V
Sbjct: 210 DNGGIDTEANYPYKAVQGP--CRAAKK---VVRIDGYKGVPHCNENALKKAVASQ-PSVV 263

Query: 432 GMNANG--LFYYSGGVID------LNQ--RLYGTSIPYWIVKNSWGSDWGEK 473
            ++A+     +Y  G+        LN    + G    YWIV+NSWG  WGE+
Sbjct: 264 AIDASSKQFQHYKSGIFSGPCGTKLNHGVVIVGYWKDYWIVRNSWGRYWGEQ 315



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 86/157 (54%), Gaps = 21/157 (13%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDC+  N GC GG    A QYIIDNGG+ ++  YPYKA +    C   ++ 
Sbjct: 178 LISLSEQQLVDCNKKNHGCKGGAFVYAYQYIIDNGGIDTEANYPYKAVQGP--CRAAKK- 234

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCNPKA 615
              V++  Y  +P+  E  +KK VA++ P  V ++A+     +Y  G+       C  K 
Sbjct: 235 --VVRIDGYKGVPHCNENALKKAVASQ-PSVVAIDASSKQFQHYKSGIFS---GPCGTKL 288

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NH ++IVGY ++         YWIV+NSWG  WGE+
Sbjct: 289 -NHGVVIVGYWKD---------YWIVRNSWGRYWGEQ 315



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 14/152 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  HDKVYS + +  +R E F  N++  +++  E+  T    +  + DL++ + Q +  
Sbjct: 48  WLAKHDKVYSGLVEYEKRFEIFKDNLKFIDEHNSENH-TYKMGLTPYTDLTNEEFQAIYL 106

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                T+  ++ ++          +E  A++      GD+LPE  DWR +G ++ VK QG
Sbjct: 107 GTRSDTIHRLKRTINI--------SERYAYE-----AGDNLPEQIDWRKKGAVTPVKNQG 153

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           KC  CWAFS V  VE+++ I+  NL  LS Q 
Sbjct: 154 KCGSCWAFSTVSTVESINQIRTGNLISLSEQQ 185


>gi|116781957|gb|ABK22314.1| unknown [Picea sitchensis]
          Length = 369

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/294 (35%), Positives = 153/294 (52%), Gaps = 35/294 (11%)

Query: 196 SVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-T 254
           ++QH        E+   R E F  NV+  +    +DS   + G+NKF DLS  + + +  
Sbjct: 50  ALQHRSSRSLDSEEHAERFEIFKENVKYIDSVNKKDSPYKL-GLNKFADLSNEEFKAIYM 108

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
           G  +D                 + D E+++  F   ++ + LP + DWR +G ++ VK Q
Sbjct: 109 GTKMDL----------------RGDREVQSGSF-MYQNSEPLPASIDWRQKGAVAAVKNQ 151

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNG 374
           G C  CWAFS V  VE ++ I   +L  LS QQLVDC   N GCNGG MD A QYII+NG
Sbjct: 152 GHCGSCWAFSTVASVEGINYITTGNLVSLSEQQLVDCSTENSGCNGGLMDTAFQYIINNG 211

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+V++  YPY A  +E        +  +V +  +  +P   E+ +K+ VA + P+SV + 
Sbjct: 212 GIVTEDNYPYTAEATECSSTKINSQTTRVVIDGFEDVPANNEQALKEAVAHQ-PVSVAIE 270

Query: 435 ANG--LFYYSGGVID------LNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
           A+G    +YS GV        L+  +    YGTS   I YWIV+NSWG  WGE+
Sbjct: 271 ASGQDFQFYSTGVFTGKCGTALDHGVVAVGYGTSPEGINYWIVRNSWGPKWGEE 324



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 90/162 (55%), Gaps = 11/162 (6%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L  L+ ++LVDC   N GCNGG MD A QYII+NGG+V++  YPY A  +E    
Sbjct: 172 ITTGNLVSLSEQQLVDCSTENSGCNGGLMDTAFQYIINNGGIVTEDNYPYTAEATECSST 231

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRL 610
               +  +V +  +  +P   E+ +K+ VA + P+SV + A+G    +YS GV       
Sbjct: 232 KINSQTTRVVIDGFEDVPANNEQALKEAVAHQ-PVSVAIEASGQDFQFYSTGVFTGK--- 287

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           C   A +H ++ VGYG   +     I YWIV+NSWG  WGE+
Sbjct: 288 CG-TALDHGVVAVGYGTSPE----GINYWIVRNSWGPKWGEE 324



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 19/141 (13%)

Query: 60  EDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQ 118
           E+   R E F  NV+  +   ++DS   +  +NKF DLS+ + + +  G  +D       
Sbjct: 62  EEHAERFEIFKENVKYIDSVNKKDSPYKL-GLNKFADLSNEEFKAIYMGTKMDL------ 114

Query: 119 PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAV 178
                     + D E+++  F   ++ + LP + DWR +G ++ VK QG C  CWAFS V
Sbjct: 115 ----------RGDREVQSGSF-MYQNSEPLPASIDWRQKGAVAAVKNQGHCGSCWAFSTV 163

Query: 179 GVVEAMHAIQGNNLTELSVQH 199
             VE ++ I   NL  LS Q 
Sbjct: 164 ASVEGINYITTGNLVSLSEQQ 184


>gi|37780041|gb|AAP32193.1| cysteine protease 14 [Trifolium repens]
          Length = 351

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/298 (36%), Positives = 160/298 (53%), Gaps = 37/298 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K+Y ++E+ L R E F  N+ K  D +++       G+N+F DLS  + +
Sbjct: 46  LFESWMSRHGKIYETIEEKLLRFEVFKDNL-KHIDERNKIVSNYWLGLNEFADLSHQEFK 104

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL ++ +        Q   SSN+ +   R           DLP++ DWR +G ++ 
Sbjct: 105 NKYLGLKVNLS--------QRRESSNEEEFTYRDV---------DLPKSVDWRKKGAVTP 147

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG+C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  +
Sbjct: 148 VKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFSF 207

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I+ NGG+  +  YPY   ES   C + +EE   V +  Y  +P   E+ + K +A + PL
Sbjct: 208 IVQNGGLHKEDDYPYIMEEST--CEMKKEETQVVTINGYHDVPQNNEQSLLKALANQ-PL 264

Query: 430 SVGMNANG--LFYYSGGVID----------LNQRLYGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+     +YSGGV D          ++   YGTS  + Y IVKNSWG+ WGEK
Sbjct: 265 SVAIEASSRDFQFYSGGVFDGHCGSDLDHGVSAVGYGTSKNLDYIIVKNSWGAKWGEK 322



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  +I+ NGG+  +  YPY   ES   C
Sbjct: 172 IVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFSFIVQNGGLHKEDDYPYIMEEST--C 229

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +EE   V +  Y  +P   E+ + K +A + PLSV + A+     +YSGGV D +  
Sbjct: 230 EMKKEETQVVTINGYHDVPQNNEQSLLKALANQ-PLSVAIEASSRDFQFYSGGVFDGH-- 286

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H +  VGYG  +  D     Y IVKNSWG+ WGEK
Sbjct: 287 -CGSDL-DHGVSAVGYGTSKNLD-----YIIVKNSWGAKWGEK 322



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 19/162 (11%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           ++  +  F ++M  H K+Y ++E+ L R E F  N++  ++  +  S   +  +N+F DL
Sbjct: 40  MDKLIELFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDERNKIVSNYWL-GLNEFADL 98

Query: 98  SDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           S  + + +  GL ++ +        Q   SSN+ +   R           DLP++ DWR 
Sbjct: 99  SHQEFKNKYLGLKVNLS--------QRRESSNEEEFTYRDV---------DLPKSVDWRK 141

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +G ++ VK QG+C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 142 KGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 183


>gi|168006315|ref|XP_001755855.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693174|gb|EDQ79528.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 454

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 158/292 (54%), Gaps = 39/292 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
              H KVYSS+E+   R+  +  N+E  + + SE + +   G+ KF D++  + ++    
Sbjct: 50  AHKHGKVYSSLEEHAHRYMVWKDNLEYIQRH-SEKNRSYWLGLTKFADITNDEFRR---- 104

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD-DLPEAFDWRAEGVISKVKEQG 315
                           ++  + D   R+ +    R+ D + PE+ DWR +G ++ VK+QG
Sbjct: 105 ---------------QYTGTRIDRSKRSKRKTGFRYADSEAPESVDWRKKGAVTTVKDQG 149

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNG 374
            C  CWAFSA+G VE ++AI+      LS Q+LVDCD+  N GCNGG MD A  +I++NG
Sbjct: 150 SCGSCWAFSAIGSVEGINAIRTGEAVSLSEQELVDCDLEYNQGCNGGLMDYAFDFILENG 209

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPYK  +    C   ++    V +  Y  +P  +EE +KK VA + P+SV + 
Sbjct: 210 GIDTENDYPYKGLDGR--CDNNKKNAHVVTIDGYEDVPENDEEALKKAVAGQ-PVSVAIE 266

Query: 435 ANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           A G  +  YSGGV       DL+  +    YG+  S+ YWIVKNSWG  WGE
Sbjct: 267 AGGRDFQLYSGGVFTGECGTDLDHGVLAVGYGSEGSLDYWIVKNSWGEYWGE 318



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 15/158 (9%)

Query: 501 LATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 559
           L+ ++LVDCD+  N GCNGG MD A  +I++NGG+ ++  YPYK  +    C   ++   
Sbjct: 177 LSEQELVDCDLEYNQGCNGGLMDYAFDFILENGGIDTENDYPYKGLDGR--CDNNKKNAH 234

Query: 560 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPKAQN 617
            V +  Y  +P  +EE +KK VA + P+SV + A G  +  YSGGV       C     +
Sbjct: 235 VVTIDGYEDVPENDEEALKKAVAGQ-PVSVAIEAGGRDFQLYSGGVFTGE---CGTDL-D 289

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           H ++ VGYG E      S+ YWIVKNSWG  WGE   L
Sbjct: 290 HGVLAVGYGSE-----GSLDYWIVKNSWGEYWGESGYL 322



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 21/156 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  +   H KVYSS+E+   R+  +  N+E  + +  E + +    + KF D+++ + +
Sbjct: 45  QFGAWAHKHGKVYSSLEEHAHRYMVWKDNLEYIQRHS-EKNRSYWLGLTKFADITNDEFR 103

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD-DLPEAFDWRAEGVISK 162
           +                    ++  + D   R+ +    R+ D + PE+ DWR +G ++ 
Sbjct: 104 R-------------------QYTGTRIDRSKRSKRKTGFRYADSEAPESVDWRKKGAVTT 144

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG C  CWAFSA+G VE ++AI+      LS Q
Sbjct: 145 VKDQGSCGSCWAFSAIGSVEGINAIRTGEAVSLSEQ 180


>gi|301769893|ref|XP_002920368.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
          Length = 503

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 221/485 (45%), Gaps = 79/485 (16%)

Query: 202 KVYSSVEDLLRRH--ENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTGLNL 258
           K+Y+  E++ RR   E  +  +++  +  S+   + +  +N F DL+  + +Q + GL +
Sbjct: 38  KLYNKDEEVWRRAVWEKNMKMIDQHNEEYSQGKHSFILAMNAFGDLTNEEFKQVMNGLKI 97

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                             Q   E   FQ        + P + DWR +G ++ VK+QG+C 
Sbjct: 98  ------------------QNPREGNMFQLLPFA---ETPSSVDWREKGYVTPVKDQGQCG 136

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGV 376
            CWAFSA G +E     +   L  LS Q LVDC  +  N GCNGG MD+A +Y+ DNGG+
Sbjct: 137 SCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAEGNAGCNGGLMDNAFRYVKDNGGL 196

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            S+++YPY A +    C    E+        ++ I + +EE +   VAT GP+SV ++A+
Sbjct: 197 DSEESYPYLAQDGR--CKYKPEQS-AANDTGFADI-HQDEESLMLSVATVGPISVAIDAS 252

Query: 437 ---GLFYYSGGVIDLNQRL-----------YGT------SIPYWIVKNSWGSDWGEKVED 476
                FYY G   D N              YG+      +  YWIVKNSWG+ WG +   
Sbjct: 253 LDTFRFYYKGIYYDPNCSSEDLDHGVLVVGYGSDEREAENKNYWIVKNSWGTQWGMQGYI 312

Query: 477 KVGSSGNRTRDLELTGVLPSKLSRLATEKL-------VDCDMSNGGCNGGRMDDALQYII 529
            +         +  +   P     +AT ++       V    +  GC    M    +   
Sbjct: 313 LMAKDRGNHCGIATSASFPIVEGPMATLQMRKDQTQWVGVSWAQKGCKPPDMSPGFK--- 369

Query: 530 DNGGVVSDQAYPYKASESERGCLV-GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 588
           +  G          ASE + G ++    E     V     +P  EE  M   VA  GP+S
Sbjct: 370 NRAG----------ASEEQTGWILRTRPECSAADVTGPVNVPQQEEAVMLA-VAAGGPVS 418

Query: 589 VGMNAN-GLFYYS--GGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSW 645
             + A+ G F +   G   D N   C+ +  +H +++VGYG +E ++  +  YWIVKNSW
Sbjct: 419 AAIRASLGSFQFCKEGIYYDPN---CSSEDLDHGVLVVGYGSDE-REAENKNYWIVKNSW 474

Query: 646 GSDWG 650
           G+DWG
Sbjct: 475 GTDWG 479



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 24/160 (15%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRH--ENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDS 100
            R+  +   + K+Y+  E++ RR   E  +  +++  +   +   + +  +N F DL++ 
Sbjct: 27  ARWTRWKAANGKLYNKDEEVWRRAVWEKNMKMIDQHNEEYSQGKHSFILAMNAFGDLTNE 86

Query: 101 DLQQ-LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
           + +Q + GL +                  Q   E   FQ        + P + DWR +G 
Sbjct: 87  EFKQVMNGLKI------------------QNPREGNMFQLLPFA---ETPSSVDWREKGY 125

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++ VK+QG+C  CWAFSA G +E     +   L  LS Q+
Sbjct: 126 VTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQN 165


>gi|374713649|gb|AEZ65082.1| cysteine protease [Carica papaya]
          Length = 471

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/317 (34%), Positives = 163/317 (51%), Gaps = 35/317 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+++ +  RR E F  N+   ++  S    T   G+ KF DL+    ++   + L 
Sbjct: 59  HGKNYNAIGEKERRFEIFKDNLRFVDEQNSVPGRTYKLGLTKFADLTN---EEYRAMYLG 115

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           + +E             +  TE      +   + DDLP   DWR +G +++VK+QG+C  
Sbjct: 116 AKME----------KKEKLRTERSQRYLHKAGNDDDLPSHVDWREKGAVTEVKDQGQCGS 165

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS VG VE ++ I    L  LS Q+LVDCD + N GCNGG MD A ++II NGG+ S
Sbjct: 166 CWAFSTVGSVEGINQIVTGDLISLSEQELVDCDKAYNQGCNGGLMDYAFEFIIKNGGIDS 225

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           +  YPY+AS++   C    +    V +  Y  +P  +EE +KK VA + P+SV + A G 
Sbjct: 226 EADYPYRASDNM--CDSNRKNAHVVTIDGYEDVPENDEESLKKAVANQ-PVSVAIEAGGR 282

Query: 439 FY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE----KVEDKVGS 480
            +  Y  GV       +L+  +    YGT   I YWIV+NSWG  WGE    ++E  V S
Sbjct: 283 EFQLYQSGVFTGRCGTNLDHGVVAVGYGTENGIDYWIVRNSWGPKWGESGYIRMERNVAS 342

Query: 481 SGNRTRDLELTGVLPSK 497
           +      + +    P+K
Sbjct: 343 TDTGKCGIAMEASYPTK 359



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD + N GCNGG MD A ++II NGG+ S+  YPY+AS++   C
Sbjct: 181 IVTGDLISLSEQELVDCDKAYNQGCNGGLMDYAFEFIIKNGGIDSEADYPYRASDNM--C 238

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P  +EE +KK VA + P+SV + A G  +  Y  GV      
Sbjct: 239 DSNRKNAHVVTIDGYEDVPENDEESLKKAVANQ-PVSVAIEAGGREFQLYQSGVF---TG 294

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C     +H ++ VGYG E       I YWIV+NSWG  WGE
Sbjct: 295 RCGTNL-DHGVVAVGYGTE-----NGIDYWIVRNSWGPKWGE 330



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 16/164 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++  H K Y+++ +  RR E F  N+   ++       T    + KF DL++   ++
Sbjct: 52  YEHWLVKHGKNYNAIGEKERRFEIFKDNLRFVDEQNSVPGRTYKLGLTKFADLTN---EE 108

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              + L + +E             +  TE      +   + DDLP   DWR +G +++VK
Sbjct: 109 YRAMYLGAKME----------KKEKLRTERSQRYLHKAGNDDDLPSHVDWREKGAVTEVK 158

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH---HDKVYS 205
           +QG+C  CWAFS VG VE ++ I   +L  LS Q     DK Y+
Sbjct: 159 DQGQCGSCWAFSTVGSVEGINQIVTGDLISLSEQELVDCDKAYN 202


>gi|400180355|gb|AFP73316.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MSILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180389|gb|AFP73333.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|242014216|ref|XP_002427787.1| Cathepsin F precursor, putative [Pediculus humanus corporis]
 gi|212512256|gb|EEB15049.1| Cathepsin F precursor, putative [Pediculus humanus corporis]
          Length = 434

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 151/299 (50%), Gaps = 48/299 (16%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V   +KVY S E+  +R   F  N++K       + GTA +G+ +F DLS ++ +   GL
Sbjct: 138 VLKFNKVYFSKEEFKKRFRIFRANMKKINFLNKAEKGTAQYGITEFSDLSVTEFKNYLGL 197

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                 E   P+ + P      D +              LP+ FDWR    ++ VK QG 
Sbjct: 198 --KKKPESKLPTAEIP------DVK--------------LPDNFDWRHYNAVTPVKNQGS 235

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G +E + AI+ + L  LS Q+L+DCD  + GCNGG M +  + I+  GG+
Sbjct: 236 CGSCWAFSVTGNIEGLWAIKKHELLSLSEQELIDCDKIDNGCNGGYMPETYEAIMKLGGL 295

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPY+A E+E+ C + + E  KVK+     +    E ++ KW+   GP+S G+NAN
Sbjct: 296 ETETDYPYEA-ENEK-CNLNKTE-IKVKINGAVNLT-KSELDIAKWLYKNGPVSAGLNAN 351

Query: 437 GLFYYSGGVIDLNQRL--------------YGT--------SIPYWIVKNSWGSDWGEK 473
            + +Y GG+    + L              YG         +IPYWI+KNSWG  WGEK
Sbjct: 352 AMQFYLGGISHPPKILCNPEEQDHGILIVGYGIHKSSILKRTIPYWIIKNSWGKHWGEK 410



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 101/164 (61%), Gaps = 5/164 (3%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  +   +L  L+ ++L+DCD  + GCNGG M +  + I+  GG+ ++  YPY+A E+E+
Sbjct: 251 LWAIKKHELLSLSEQELIDCDKIDNGCNGGYMPETYEAIMKLGGLETETDYPYEA-ENEK 309

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C + + E  KVK+     +    E ++ KW+   GP+S G+NAN + +Y GG+    + 
Sbjct: 310 -CNLNKTE-IKVKINGAVNLT-KSELDIAKWLYKNGPVSAGLNANAMQFYLGGISHPPKI 366

Query: 610 LCNPKAQNHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
           LCNP+ Q+H ++IVGYG  +      +IPYWI+KNSWG  WGEK
Sbjct: 367 LCNPEEQDHGILIVGYGIHKSSILKRTIPYWIIKNSWGKHWGEK 410



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 22/154 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F +F+   +KVY S E+  +R   F  N++K     + + GTA + + +F DLS ++ + 
Sbjct: 134 FKDFVLKFNKVYFSKEEFKKRFRIFRANMKKINFLNKAEKGTAQYGITEFSDLSVTEFKN 193

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
             GL      E   P+ + P      D +              LP+ FDWR    ++ VK
Sbjct: 194 YLGL--KKKPESKLPTAEIP------DVK--------------LPDNFDWRHYNAVTPVK 231

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G +E + AI+ + L  LS Q
Sbjct: 232 NQGSCGSCWAFSVTGNIEGLWAIKKHELLSLSEQ 265


>gi|83944664|gb|ABC48936.1| cathepsin F like protease [Glossina morsitans morsitans]
          Length = 471

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 143/293 (48%), Gaps = 47/293 (16%)

Query: 204 YSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL-NLDSTL 262
           Y +  +   R   F  N++  E+    + G+A +G+ +F D++  + +Q TGL   D   
Sbjct: 177 YHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYGITEFADMTSPEYKQRTGLWQRDPQK 236

Query: 263 EDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWA 322
               P  + P                      DLP+ FDWR +G IS VK QG C  CWA
Sbjct: 237 AASNPKAEIP--------------------NIDLPKEFDWREKGAISAVKNQGNCGSCWA 276

Query: 323 FSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAY 382
           FS  G +E +HA++   L + S Q+L+DCD S+  CNGG  D+A + I   GG+  +  Y
Sbjct: 277 FSVTGNIEGLHAVRTGVLEQYSEQELLDCDTSDSACNGGLPDNAYEAIEKIGGLELESDY 336

Query: 383 PYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYS 442
           PY A + +  C     +   VKVK +  +P   E  + +W+   GP+S+G+NAN + +Y 
Sbjct: 337 PYHARKDQ--CHFNSTK-IHVKVKGHVDLP-KNETAIAQWLIANGPISIGINANAMQFYR 392

Query: 443 GGVID----LNQR------------------LYGTSIPYWIVKNSWGSDWGEK 473
           GGV      L  R                  ++  ++PYWIVKNSWG  WGE+
Sbjct: 393 GGVSHPPHILCSRKNLDHGVLIVGYRVSDYPMFKKTLPYWIVKNSWGKKWGEQ 445



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  V    L + + ++L+DCD S+  CNGG  D+A + I   GG+  +  YPY A + + 
Sbjct: 286 LHAVRTGVLEQYSEQELLDCDTSDSACNGGLPDNAYEAIEKIGGLELESDYPYHARKDQ- 344

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C     +   VKVK +  +P   E  + +W+   GP+S+G+NAN + +Y GGV      
Sbjct: 345 -CHFNSTK-IHVKVKGHVDLP-KNETAIAQWLIANGPISIGINANAMQFYRGGVSHPPHI 401

Query: 610 LCNPKAQNHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H ++IVGY   +      ++PYWIVKNSWG  WGE+
Sbjct: 402 LCSRKNLDHGVLIVGYRVSDYPMFKKTLPYWIVKNSWGKKWGEQ 445



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 21/162 (12%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           LN     F  F     + Y +  +   R   F  N++  E+  R + G+A + + +F D+
Sbjct: 159 LNKVEHLFAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYGITEFADM 218

Query: 98  SDSDLQQLTGL-NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           +  + +Q TGL   D       P  + P                      DLP+ FDWR 
Sbjct: 219 TSPEYKQRTGLWQRDPQKAASNPKAEIP--------------------NIDLPKEFDWRE 258

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +G IS VK QG C  CWAFS  G +E +HA++   L + S Q
Sbjct: 259 KGAISAVKNQGNCGSCWAFSVTGNIEGLHAVRTGVLEQYSEQ 300


>gi|400180428|gb|AFP73352.1| cysteine protease [Solanum corneliomuelleri]
          Length = 344

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 14/152 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLT 106
           +M  H +VY    +   R   F  N++  E   +  + +    +N+F D++  + L + T
Sbjct: 42  WMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFT 101

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           GLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK Q
Sbjct: 102 GLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVKHQ 148

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G+C CCWAFSAVG +E  + I   NL E S Q
Sbjct: 149 GRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQ 180


>gi|400180393|gb|AFP73335.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    + + R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKVERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +        + N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------LKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    + + R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKVERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                   + N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------LKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|224076970|ref|XP_002305073.1| predicted protein [Populus trichocarpa]
 gi|222848037|gb|EEE85584.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 152/304 (50%), Gaps = 41/304 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H +VY  +++  +R+  F  N+E+ E + +        GVNKF DL+  + +     
Sbjct: 44  MAQHGRVYGDMKEKEKRYLIFKENIERIEAFNNGSDRGYKLGVNKFADLTNEEFR----- 98

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                      ++   +    +     +F++ +L    D+P + DWR +G ++ VK+QG 
Sbjct: 99  -----------AMYHGYKRQSSKLMSSSFRYENL---SDIPTSMDWRNDGAVTPVKDQGT 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C CCWAFS V  +E +  +Q  +L  LS QQLVDC   N GC GG MD A QYII NGG+
Sbjct: 145 CGCCWAFSTVAAIEGIIKLQTGNLISLSEQQLVDCTAGNKGCQGGLMDTAFQYIIRNGGL 204

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            S+  YPY+  +    C   +    + ++  Y  +P   E  + + VA + P+SVG++  
Sbjct: 205 TSEDNYPYQGVDGT--CSSEKAASTEAQITGYEDVPQNNENALLQAVAKQ-PVSVGVDGG 261

Query: 437 G--LFYYSGGVID----------LNQRLYGTSI---PYWIVKNSWGSDWGE----KVEDK 477
           G    +Y  GV +          +    YGT I    YW+VKNSWG+ WGE    ++   
Sbjct: 262 GNDFQFYKSGVFNGDCGTQQNHAVTAIGYGTDIDGTDYWLVKNSWGTSWGENGYMRMRRG 321

Query: 478 VGSS 481
           +GSS
Sbjct: 322 IGSS 325



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 13/156 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDC   N GC GG MD A QYII NGG+ S+  YPY+  +    C   +  
Sbjct: 168 LISLSEQQLVDCTAGNKGCQGGLMDTAFQYIIRNGGLTSEDNYPYQGVDGT--CSSEKAA 225

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCNPKA 615
             + ++  Y  +P   E  + + VA + P+SVG++  G    +Y  GV + +   C  + 
Sbjct: 226 STEAQITGYEDVPQNNENALLQAVAKQ-PVSVGVDGGGNDFQFYKSGVFNGD---CGTQ- 280

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           QNHA+  +GYG +   DGT   YW+VKNSWG+ WGE
Sbjct: 281 QNHAVTAIGYGTD--IDGTD--YWLVKNSWGTSWGE 312



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 19/158 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           + R   +M  H +VY  +++  +R+  F  N+E+ E +           VNKF DL++ +
Sbjct: 37  LKRHEEWMAQHGRVYGDMKEKEKRYLIFKENIERIEAFNNGSDRGYKLGVNKFADLTNEE 96

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +                ++   +    +     +F++ +L    D+P + DWR +G ++
Sbjct: 97  FR----------------AMYHGYKRQSSKLMSSSFRYENL---SDIPTSMDWRNDGAVT 137

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            VK+QG C CCWAFS V  +E +  +Q  NL  LS Q 
Sbjct: 138 PVKDQGTCGCCWAFSTVAAIEGIIKLQTGNLISLSEQQ 175


>gi|356515040|ref|XP_003526209.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 342

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 37/318 (11%)

Query: 175 FSAVGVVEAM----HAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE 230
           F AVG+ + M    H        E  +  + K+Y    +  +R + F  NVE  E + + 
Sbjct: 16  FLAVGISQVMPRKLHQTALRERHENWMAEYGKMYKDAAEKEKRFQIFKDNVEFIESFNAA 75

Query: 231 DSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSL 290
            +     GVN   DL+  + +            D +  L+  +  + T  ++  F++ ++
Sbjct: 76  GNKPYKLGVNHLADLTLEEFK------------DSRNGLKRTYEFSTTTFKLNGFKYENV 123

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQG-KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
               D+PEA DWR +G ++ +K+QG +C  CWAFS +   E +H I   +L  LS Q+LV
Sbjct: 124 T---DIPEAIDWRVKGAVTPIKDQGDQCGSCWAFSTIAATEGIHQISTGNLVSLSEQELV 180

Query: 350 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
           DCD  + GC GG M+D  ++II NGG+ S+  YPYK  +      +        ++K Y 
Sbjct: 181 DCDSVDDGCEGGFMEDGFEFIIKNGGITSETNYPYKGVDGTCNTTIAASP--VAQIKGYE 238

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNA-NGLF-YYSGGV------IDLNQRL----YGT-- 455
            +P   EE ++K VA + P+SV ++A N  F +YS G+       DL+  +    YGT  
Sbjct: 239 IVPSYSEEALQKAVANQ-PVSVSIHATNATFMFYSSGIYNGECGTDLDHGVTAVGYGTEN 297

Query: 456 SIPYWIVKNSWGSDWGEK 473
              YWIVKNSWG+ WGEK
Sbjct: 298 GTDYWIVKNSWGTQWGEK 315



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 87/157 (55%), Gaps = 14/157 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  + GC GG M+D  ++II NGG+ S+  YPYK  +      +    
Sbjct: 171 LVSLSEQELVDCDSVDDGCEGGFMEDGFEFIIKNGGITSETNYPYKGVDGTCNTTIAASP 230

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA-NGLF-YYSGGVIDLNQRLCNPKA 615
               ++K Y  +P   EE ++K VA + P+SV ++A N  F +YS G+ +     C    
Sbjct: 231 --VAQIKGYEIVPSYSEEALQKAVANQ-PVSVSIHATNATFMFYSSGIYNGE---CGTDL 284

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +  VGYG E   D     YWIVKNSWG+ WGEK
Sbjct: 285 -DHGVTAVGYGTENGTD-----YWIVKNSWGTQWGEK 315



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 16/156 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R  N+M ++ K+Y    +  +R + F  NVE  E +    +      VN   DL+  + +
Sbjct: 37  RHENWMAEYGKMYKDAAEKEKRFQIFKDNVEFIESFNAAGNKPYKLGVNHLADLTLEEFK 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                       D +  L+  +  + T  ++  F++ ++    D+PEA DWR +G ++ +
Sbjct: 97  ------------DSRNGLKRTYEFSTTTFKLNGFKYENVT---DIPEAIDWRVKGAVTPI 141

Query: 164 KEQG-KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG +C  CWAFS +   E +H I   NL  LS Q
Sbjct: 142 KDQGDQCGSCWAFSTIAATEGIHQISTGNLVSLSEQ 177


>gi|400180453|gb|AFP73363.1| cysteine protease [Solanum chilense]
          Length = 344

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PVSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 14/152 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLT 106
           +M  H +VY    +   R   F  N++  E   +  + +    +N+F D++  + L + T
Sbjct: 42  WMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFT 101

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           GLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK Q
Sbjct: 102 GLNIPNSY--LSPS---PVSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVKHQ 148

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G+C CCWAFSAVG +E  + I   NL E S Q
Sbjct: 149 GRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQ 180


>gi|2511695|emb|CAB17077.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 377

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 159/310 (51%), Gaps = 62/310 (20%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTG 255
           ++++ K YS+ E+ L+R E F  N+ +A + Q+ D  TA+ GV +F DL+E + Q+  TG
Sbjct: 57  MENYGKKYSTREEYLQRLEIFAGNMLRAPENQALDP-TAIHGVTQFSDLTEDEFQRHYTG 115

Query: 256 LN----LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
           +N     ++ + D+ P L+                       D LPE FDWR +G +++V
Sbjct: 116 VNGGFPWNNGVRDVAPPLKV----------------------DGLPEDFDWREKGAVTEV 153

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNGGCNGGR 362
           K QGKC  CWAFS  G +E  + I    L  LS QQLVDCD           + GC GG 
Sbjct: 154 KMQGKCGSCWAFSTTGSIEGANFIATGKLLNLSEQQLVDCDSQCDITESTTCDNGCMGGL 213

Query: 363 MDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKW 422
           M +A +Y++ +GG+  + +YPY  ++ E     G+     V++  ++ IP  +E ++  +
Sbjct: 214 MTNAYKYLLQSGGLEEESSYPYTGAKGECKFDPGK---VAVRITNFTNIPV-DENQIAAY 269

Query: 423 VATRGPLSVGMNANGLFYYSG---------------GVIDLNQRLYGTSI------PYWI 461
           +   GPL+VG+NA  +  Y G               GV+ +  R  G SI      PYWI
Sbjct: 270 LVKHGPLAVGLNAIFMQTYIGGVSCPLICSKKWLNHGVLLVGYRAKGFSILRLGNKPYWI 329

Query: 462 VKNSWGSDWG 471
           +KNSWG  WG
Sbjct: 330 IKNSWGKRWG 339



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 116/234 (49%), Gaps = 28/234 (11%)

Query: 435 ANGLFYYSGGVIDLNQRLYGTSIPYWIVKNSWGSDWGEKVEDKVGSSGNRTRDLELTG-- 492
            NG F ++ GV D+   L    +P        G+    K++ K GS    +    + G  
Sbjct: 116 VNGGFPWNNGVRDVAPPLKVDGLPEDFDWREKGAVTEVKMQGKCGSCWAFSTTGSIEGAN 175

Query: 493 -VLPSKLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPY 542
            +   KL  L+ ++LVDCD           + GC GG M +A +Y++ +GG+  + +YPY
Sbjct: 176 FIATGKLLNLSEQQLVDCDSQCDITESTTCDNGCMGGLMTNAYKYLLQSGGLEEESSYPY 235

Query: 543 KASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGG 602
             ++ E     G+     V++  ++ IP  +E ++  ++   GPL+VG+NA  +  Y GG
Sbjct: 236 TGAKGECKFDPGK---VAVRITNFTNIPV-DENQIAAYLVKHGPLAVGLNAIFMQTYIGG 291

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWG 650
           V      +C+ K  NH +++VGY    +  G SI      PYWI+KNSWG  WG
Sbjct: 292 VS--CPLICSKKWLNHGVLLVGY----RAKGFSILRLGNKPYWIIKNSWGKRWG 339



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 35/188 (18%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA 76
           +H    K+ L ++ + +T         +F  FM ++ K YS+ E+ L+R E F  N+ +A
Sbjct: 32  VHDIAKKLKLQDNQLLRTE-------KKFNVFMENYGKKYSTREEYLQRLEIFAGNMLRA 84

Query: 77  EDYQREDSGTAVFEVNKFFDLSDSDLQQ-LTGLN----LDSTLEDIQPSLQAPFSSNQTD 131
            + Q  D  TA+  V +F DL++ + Q+  TG+N     ++ + D+ P L+         
Sbjct: 85  PENQALDP-TAIHGVTQFSDLTEDEFQRHYTGVNGGFPWNNGVRDVAPPLKV-------- 135

Query: 132 TEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNN 191
                         D LPE FDWR +G +++VK QGKC  CWAFS  G +E  + I    
Sbjct: 136 --------------DGLPEDFDWREKGAVTEVKMQGKCGSCWAFSTTGSIEGANFIATGK 181

Query: 192 LTELSVQH 199
           L  LS Q 
Sbjct: 182 LLNLSEQQ 189


>gi|255568297|ref|XP_002525123.1| cysteine protease, putative [Ricinus communis]
 gi|223535582|gb|EEF37250.1| cysteine protease, putative [Ricinus communis]
          Length = 349

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 38/307 (12%)

Query: 184 MHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFF 243
           +H ++     E  +  H KVY   ++ LRR + F +NV   E + +  + + + G+NKF 
Sbjct: 30  LHELEMTGRHEKWMAKHGKVYKDDKEKLRRFQIFKSNVVFIESFNTAGNKSYMLGINKFA 89

Query: 244 DLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 303
           DL+  + +                  + P  +++  T    F++ ++     LP + DWR
Sbjct: 90  DLTNEEFRAFWN------------GYKRPLGASRKITP---FKYENV---TALPSSIDWR 131

Query: 304 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGG 361
           ++G ++ +K+QG C  CWAFSAV   E +H ++   L  LS Q+LVDCD+   + GC GG
Sbjct: 132 SKGAVTPIKDQGVCGSCWAFSAVAATEGIHKLRTGKLVSLSEQELVDCDVKGQDKGCQGG 191

Query: 362 RMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKK 421
            M DA ++I  +GG+ S+  YPY+  + +  C   +E    VK+  Y  +P   E  + K
Sbjct: 192 LMVDAFKFIKRHGGMTSEANYPYQGRDGK--CDTKKEASRAVKITGYQAVPKNSEAALLK 249

Query: 422 WVATRGPLSVGMNANGL---FYYSG---GVI--DLNQRL----YGTS---IPYWIVKNSW 466
            VA + P+SV ++A  L   FY SG   G+   D+N  +    YG S     YWIVKNSW
Sbjct: 250 AVANQ-PVSVAIDAGSLSFQFYRSGIFTGICGKDINHGVAAVGYGRSNSGSKYWIVKNSW 308

Query: 467 GSDWGEK 473
           G++WGEK
Sbjct: 309 GTEWGEK 315



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 17/161 (10%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG M DA ++I  +GG+ S+  YPY+  + +  C   
Sbjct: 167 KLVSLSEQELVDCDVKGQDKGCQGGLMVDAFKFIKRHGGMTSEANYPYQGRDGK--CDTK 224

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLNQRLC 611
           +E    VK+  Y  +P   E  + K VA + P+SV ++A  L   FY SG    +   +C
Sbjct: 225 KEASRAVKITGYQAVPKNSEAALLKAVANQ-PVSVAIDAGSLSFQFYRSG----IFTGIC 279

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             K  NH +  VGYG    +  +   YWIVKNSWG++WGEK
Sbjct: 280 G-KDINHGVAAVGYG----RSNSGSKYWIVKNSWGTEWGEK 315



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  H KVY   ++ LRR + F +NV   E +    + + +  +NKF DL++ + +
Sbjct: 38  RHEKWMAKHGKVYKDDKEKLRRFQIFKSNVVFIESFNTAGNKSYMLGINKFADLTNEEFR 97

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                             + P  +++  T    F++ ++     LP + DWR++G ++ +
Sbjct: 98  AFWN------------GYKRPLGASRKITP---FKYENV---TALPSSIDWRSKGAVTPI 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFSAV   E +H ++   L  LS Q
Sbjct: 140 KDQGVCGSCWAFSAVAATEGIHKLRTGKLVSLSEQ 174


>gi|356508490|ref|XP_003522989.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 349

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/298 (36%), Positives = 159/298 (53%), Gaps = 39/298 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K+Y S+E+ L R E F  N+ K  D +++       G+N+F DLS  + +
Sbjct: 46  LFESWMSKHGKIYQSIEEKLLRFEIFKDNL-KHIDERNKVVSNYWLGLNEFADLSHQEFK 104

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL +D +     P                 F +  +    +LP++ DWR +G ++ 
Sbjct: 105 NKYLGLKVDYSRRRESP---------------EEFTYKDV----ELPKSVDWRKKGAVAP 145

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  +
Sbjct: 146 VKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSF 205

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I++NGG+  ++ YPY   E    C + +EE   V +  Y  +P   E+ + K +A + PL
Sbjct: 206 IVENGGLHKEEDYPYIMEEGT--CEMTKEETEVVTISGYHDVPQNNEQSLLKALANQ-PL 262

Query: 430 SVGMNANG--LFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV       DL+  +    YGT+  + Y IVKNSWGS WGEK
Sbjct: 263 SVAIEASGRDFQFYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYIIVKNSWGSKWGEK 320



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 93/163 (57%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  +I++NGG+  ++ YPY   E    C
Sbjct: 170 IVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSFIVENGGLHKEEDYPYIMEEGT--C 227

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +EE   V +  Y  +P   E+ + K +A + PLSV + A+G    +YSGGV D +  
Sbjct: 228 EMTKEETEVVTISGYHDVPQNNEQSLLKALANQ-PLSVAIEASGRDFQFYSGGVFDGH-- 284

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H +  VGYG  +  D     Y IVKNSWGS WGEK
Sbjct: 285 -CGSDL-DHGVAAVGYGTAKGVD-----YIIVKNSWGSKWGEK 320



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 28/195 (14%)

Query: 12  KGLGYLHTFMIKVALLESNIFQTRGY-------LNSPVTRFLNFMRDHDKVYSSVEDLLR 64
           K L    +F +  +L     F   GY       ++  +  F ++M  H K+Y S+E+ L 
Sbjct: 7   KALVLACSFCLFASLAFGRDFSIVGYSSEDLKSMDKLIELFESWMSKHGKIYQSIEEKLL 66

Query: 65  RHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQPSLQA 123
           R E F  N++  ++  +  S   +  +N+F DLS  + + +  GL +D +     P    
Sbjct: 67  RFEIFKDNLKHIDERNKVVSNYWL-GLNEFADLSHQEFKNKYLGLKVDYSRRRESP---- 121

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
                        F +  +    +LP++ DWR +G ++ VK QG C  CWAFS V  VE 
Sbjct: 122 -----------EEFTYKDV----ELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEG 166

Query: 184 MHAIQGNNLTELSVQ 198
           ++ I   NLT LS Q
Sbjct: 167 INQIVTGNLTSLSEQ 181


>gi|156389068|ref|XP_001634814.1| predicted protein [Nematostella vectensis]
 gi|156221901|gb|EDO42751.1| predicted protein [Nematostella vectensis]
          Length = 276

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/273 (36%), Positives = 143/273 (52%), Gaps = 40/273 (14%)

Query: 217 FVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSN 276
           F +N+ KA   Q  DSGTA +G   F DLSE + ++          + + P    P    
Sbjct: 4   FESNMRKAAKMQKMDSGTAQYGPTIFSDLSEEEFRK----------QKMMPGWGKPLYEM 53

Query: 277 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 336
           + D E+            D+PE+ DWR +GV++ VK QG C  CWAFS  G +E  +AI+
Sbjct: 54  K-DAEIPL---------GDIPESVDWRDKGVVTPVKNQGSCGSCWAFSTTGNIEGQYAIK 103

Query: 337 GNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 396
              L  LS Q+LVDCD  + GC GG   +A + I   GG+ S+  YPYK ++S+  C   
Sbjct: 104 TGKLVSLSEQELVDCDTIDKGCEGGLPSNAYKQIEKLGGLESESDYPYKGADSK--CKFN 161

Query: 397 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI---------- 446
           + E  KV +   S +   +E+E+  W+A  GP+S+G+NAN + +Y GG+           
Sbjct: 162 KAE-VKVTINS-SVVISKDEKEIAAWLAKNGPISIGINANAMQFYMGGIAHPWKIFCNPS 219

Query: 447 DLNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
            LN  +    YG     PYWI+KNSWG  WGEK
Sbjct: 220 SLNHGVLIVGYGVKNGTPYWIIKNSWGPSWGEK 252



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 67/156 (42%), Positives = 97/156 (62%), Gaps = 9/156 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GC GG   +A + I   GG+ S+  YPYK ++S+  C   + 
Sbjct: 106 KLVSLSEQELVDCDTIDKGCEGGLPSNAYKQIEKLGGLESESDYPYKGADSK--CKFNKA 163

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           E  KV +   S +   +E+E+  W+A  GP+S+G+NAN + +Y GG+    +  CNP + 
Sbjct: 164 E-VKVTINS-SVVISKDEKEIAAWLAKNGPISIGINANAMQFYMGGIAHPWKIFCNPSSL 221

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           NH ++IVGYG    K+GT  PYWI+KNSWG  WGEK
Sbjct: 222 NHGVLIVGYGV---KNGT--PYWIIKNSWGPSWGEK 252



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 20/131 (15%)

Query: 69  FVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSN 128
           F +N+ KA   Q+ DSGTA +    F DLS+ + ++          + + P    P    
Sbjct: 4   FESNMRKAAKMQKMDSGTAQYGPTIFSDLSEEEFRK----------QKMMPGWGKPLYEM 53

Query: 129 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
           + D E+            D+PE+ DWR +GV++ VK QG C  CWAFS  G +E  +AI+
Sbjct: 54  K-DAEIPL---------GDIPESVDWRDKGVVTPVKNQGSCGSCWAFSTTGNIEGQYAIK 103

Query: 189 GNNLTELSVQH 199
              L  LS Q 
Sbjct: 104 TGKLVSLSEQE 114


>gi|356508487|ref|XP_003522988.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 349

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/298 (36%), Positives = 158/298 (53%), Gaps = 39/298 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K+Y S+E+ L R + F  N+ K  D +++       G+N+F DLS  + +
Sbjct: 46  LFESWMSRHGKIYQSIEEKLHRFDIFKDNL-KHIDERNKVVSNYWLGLNEFADLSHQEFK 104

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL +D +     P                 F +       +LP++ DWR +G +++
Sbjct: 105 NKYLGLKVDYSRRRESP---------------EEFTYKDF----ELPKSVDWRKKGAVTQ 145

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  +
Sbjct: 146 VKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSF 205

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I++NGG+  ++ YPY   E    C + +EE   V +  Y  +P   E+ + K +  + PL
Sbjct: 206 IVENGGLHKEEDYPYIMEEGT--CEMTKEETEVVTISGYHDVPQNNEQSLLKALVNQ-PL 262

Query: 430 SVGMNANG--LFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV       DL+  +    YGTS  + Y IVKNSWGS WGEK
Sbjct: 263 SVAIEASGRDFQFYSGGVFDGHCGSDLDHGVAAVGYGTSKGVNYIIVKNSWGSKWGEK 320



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  +I++NGG+  ++ YPY   E    C
Sbjct: 170 IVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSFIVENGGLHKEEDYPYIMEEGT--C 227

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +EE   V +  Y  +P   E+ + K +  + PLSV + A+G    +YSGGV D +  
Sbjct: 228 EMTKEETEVVTISGYHDVPQNNEQSLLKALVNQ-PLSVAIEASGRDFQFYSGGVFDGH-- 284

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H +  VGYG  +      + Y IVKNSWGS WGEK
Sbjct: 285 -CGSDL-DHGVAAVGYGTSK-----GVNYIIVKNSWGSKWGEK 320



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 28/195 (14%)

Query: 12  KGLGYLHTFMIKVALLESNIFQTRGY-------LNSPVTRFLNFMRDHDKVYSSVEDLLR 64
           K L    +F +  +L  +  F   GY       ++  +  F ++M  H K+Y S+E+ L 
Sbjct: 7   KALFLACSFCLFASLAVAGDFSIVGYSSEDLKSMDKLIELFESWMSRHGKIYQSIEEKLH 66

Query: 65  RHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQPSLQA 123
           R + F  N++  ++  +  S   +  +N+F DLS  + + +  GL +D +     P    
Sbjct: 67  RFDIFKDNLKHIDERNKVVSNYWL-GLNEFADLSHQEFKNKYLGLKVDYSRRRESP---- 121

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
                        F +       +LP++ DWR +G +++VK QG C  CWAFS V  VE 
Sbjct: 122 -----------EEFTYKDF----ELPKSVDWRKKGAVTQVKNQGSCGSCWAFSTVAAVEG 166

Query: 184 MHAIQGNNLTELSVQ 198
           ++ I   NLT LS Q
Sbjct: 167 INQIVTGNLTSLSEQ 181


>gi|29567137|ref|NP_818699.1| cathepsin [Adoxophyes honmai NPV]
 gi|37076951|sp|Q80LP4.1|CATV_NPVAH RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|29467913|dbj|BAC67303.1| cathepsin [Adoxophyes honmai NPV]
          Length = 337

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 167/313 (53%), Gaps = 44/313 (14%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL-QQ 252
           E  + +++K Y   +    R + F  N+E   + +++ + +A++ +NKF DLS+++L  +
Sbjct: 33  ETFIINYNKQYPDTKTKNYRFKIFKQNLEDINE-KNKLNDSAIYNINKFSDLSKNELLTK 91

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH-------GDDLPEAFDWRAE 305
            TGL         +PS     +SN          F ++ H        D+LP+ FDWR  
Sbjct: 92  YTGLT------SKKPSNMVRSTSN----------FCNVIHLDAPPDVHDELPQNFDWRVN 135

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDD 365
             ++ VK+QG C  CWA +AVG +E ++AI+ N L  LS QQL+DCD +N  C+GG M  
Sbjct: 136 NKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCDSANMACDGGLMHT 195

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
           A + +++ GG++ +  YPY+ +   +G    + + F + V    R  +  EE +KK + T
Sbjct: 196 AFEQLMNAGGLMEEIDYPYQGT---KGVCKIDNKKFALSVSSCKRYIFQNEENLKKELIT 252

Query: 426 RGPLSVGMNANGLFYYSGGVIDLNQRL----------YGTS--IPYWIVKNSWGSDWGE- 472
            GP+++ ++A  +  YS G+I   + L          YGT   + YW +KNSWGSDWGE 
Sbjct: 253 MGPIAMAIDAASISTYSKGIIHFCENLGLNHAVLLVGYGTEGGVSYWTLKNSWGSDWGED 312

Query: 473 ---KVEDKVGSSG 482
              +V+  + + G
Sbjct: 313 GYFRVKRNINACG 325



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 12/162 (7%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  +  + L  L+ ++L+DCD +N  C+GG M  A + +++ GG++ +  YPY+ +   +
Sbjct: 162 LYAIKHNYLINLSEQQLIDCDSANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGT---K 218

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
           G    + + F + V    R  +  EE +KK + T GP+++ ++A  +  YS G+I     
Sbjct: 219 GVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASISTYSKGII----H 274

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C     NHA+++VGYG E       + YW +KNSWGSDWGE
Sbjct: 275 FCENLGLNHAVLLVGYGTE-----GGVSYWTLKNSWGSDWGE 311



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 25/162 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL-Q 103
           F  F+ +++K Y   +    R + F  N+E   +  + +  +A++ +NKF DLS ++L  
Sbjct: 32  FETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLND-SAIYNINKFSDLSKNELLT 90

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH-------GDDLPEAFDWRA 156
           + TGL         +PS     +SN          F ++ H        D+LP+ FDWR 
Sbjct: 91  KYTGLT------SKKPSNMVRSTSN----------FCNVIHLDAPPDVHDELPQNFDWRV 134

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
              ++ VK+QG C  CWA +AVG +E ++AI+ N L  LS Q
Sbjct: 135 NNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQ 176


>gi|400180407|gb|AFP73342.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    + + R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKVERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    + + R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKVERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180357|gb|AFP73317.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  S   QTR      ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MSILITLFFVISMFNS---QTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180365|gb|AFP73321.1| cysteine protease [Solanum peruvianum]
 gi|400180395|gb|AFP73336.1| cysteine protease [Solanum peruvianum]
 gi|400180405|gb|AFP73341.1| cysteine protease [Solanum peruvianum]
 gi|400180409|gb|AFP73343.1| cysteine protease [Solanum peruvianum]
 gi|400180411|gb|AFP73344.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|449438381|ref|XP_004136967.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 479

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 156/296 (52%), Gaps = 34/296 (11%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  + HH K Y+++ +  RR E F  N+   +++  E S T   G+ +F DL+  + +
Sbjct: 61  LYESWLVHHGKAYNAIGEKERRFEIFKDNLRFIDEHNRE-SRTYKVGLTRFADLTNEEYR 119

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
                            L   FS     +  ++ ++ +   GDDLP+  DWR +G ++ V
Sbjct: 120 ARF--------------LGGRFSRKPRLSAAKSGRYAAAL-GDDLPDDVDWRKKGAVATV 164

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYI 370
           K+QG+C  CWAFS+V  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A Q+I
Sbjct: 165 KDQGQCGSCWAFSSVAAVEGINQIVTGELIPLSEQELVDCDKSFNMGCNGGLMDYAFQFI 224

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           I NGG+ +++ YPYK  ++   C    +    V +  Y  +P  +E  +KK VA + P+S
Sbjct: 225 IGNGGIDTEEDYPYKGRDA--ACDPNRKNAKVVTIDGYEDVPENDESSLKKAVANQ-PVS 281

Query: 431 VGMNANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           V + A G  +  Y  GV       DL+  +    YGT     YWIV+NSWG DWGE
Sbjct: 282 VAIEAGGRAFQLYQSGVFTGRCGTDLDHGVVAVGYGTDNGTDYWIVRNSWGKDWGE 337



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  +L  L+ ++LVDCD S N GCNGG MD A Q+II NGG+ +++ YPYK  ++   C
Sbjct: 188 IVTGELIPLSEQELVDCDKSFNMGCNGGLMDYAFQFIIGNGGIDTEEDYPYKGRDA--AC 245

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P  +E  +KK VA + P+SV + A G  +  Y  GV      
Sbjct: 246 DPNRKNAKVVTIDGYEDVPENDESSLKKAVANQ-PVSVAIEAGGRAFQLYQSGVF---TG 301

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C     +H ++ VGYG +   D     YWIV+NSWG DWGE
Sbjct: 302 RCGTDL-DHGVVAVGYGTDNGTD-----YWIVRNSWGKDWGE 337



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 16/154 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++  H K Y+++ +  RR E F  N+   +++ RE S T    + +F DL++ + + 
Sbjct: 62  YESWLVHHGKAYNAIGEKERRFEIFKDNLRFIDEHNRE-SRTYKVGLTRFADLTNEEYRA 120

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                           L   FS     +  ++ ++ +   GDDLP+  DWR +G ++ VK
Sbjct: 121 RF--------------LGGRFSRKPRLSAAKSGRYAAAL-GDDLPDDVDWRKKGAVATVK 165

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG+C  CWAFS+V  VE ++ I    L  LS Q
Sbjct: 166 DQGQCGSCWAFSSVAAVEGINQIVTGELIPLSEQ 199


>gi|195453400|ref|XP_002073772.1| GK14287 [Drosophila willistoni]
 gi|194169857|gb|EDW84758.1| GK14287 [Drosophila willistoni]
          Length = 610

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 152/302 (50%), Gaps = 42/302 (13%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           +  ++   +  +SVE  +R    F  N+   E   + + G+A +G+ +F D++ ++ ++ 
Sbjct: 305 KFQIKFERRYVNSVERQMRL-RIFRQNLRIIEQLNANEMGSAKYGITEFADMTSTEYKER 363

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
           TGL         Q +   P    +               G +LP+ FDWR +G +S VK 
Sbjct: 364 TGL--------WQRTEGQPTGGQKAVVPSYP--------GGELPKEFDWRQKGAVSSVKN 407

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN 373
           QG C  CWAFS +G +E ++A++   L E S Q+L+DCD  +  CNGG  D+A + I + 
Sbjct: 408 QGSCGSCWAFSTIGNIEGLNAVKTGQLKEFSEQELLDCDTKDSACNGGLPDNAYKAIQEI 467

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+  +  YPYKA + +  C   +     V+V  +  +P   E  M++W+   GP+S+G+
Sbjct: 468 GGLEYESEYPYKARKEQ--CHFNKTLAH-VQVTGFVDLPKNNETAMQEWLIANGPISIGI 524

Query: 434 NANGLFYYSGGVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWG 471
           NAN + +Y GGV    + L              YG S        +PYWIVKNSWG  WG
Sbjct: 525 NANAMQFYRGGVSHPWKILCEKSNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWG 584

Query: 472 EK 473
           E+
Sbjct: 585 EQ 586



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  V   +L   + ++L+DCD  +  CNGG  D+A + I + GG+  +  YPYKA + + 
Sbjct: 426 LNAVKTGQLKEFSEQELLDCDTKDSACNGGLPDNAYKAIQEIGGLEYESEYPYKARKEQ- 484

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C   +     V+V  +  +P   E  M++W+   GP+S+G+NAN + +Y GGV    + 
Sbjct: 485 -CHFNKTLAH-VQVTGFVDLPKNNETAMQEWLIANGPISIGINANAMQFYRGGVSHPWKI 542

Query: 610 LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           LC     +H ++IVGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 543 LCEKSNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 586



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 16/154 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F    ++ Y +  +   R   F  N+   E     + G+A + + +F D++ ++ ++
Sbjct: 303 FHKFQIKFERRYVNSVERQMRLRIFRQNLRIIEQLNANEMGSAKYGITEFADMTSTEYKE 362

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TGL         Q +   P    +               G +LP+ FDWR +G +S VK
Sbjct: 363 RTGL--------WQRTEGQPTGGQKAVVPSYP--------GGELPKEFDWRQKGAVSSVK 406

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS +G +E ++A++   L E S Q
Sbjct: 407 NQGSCGSCWAFSTIGNIEGLNAVKTGQLKEFSEQ 440


>gi|400180426|gb|AFP73351.1| cysteine protease [Solanum corneliomuelleri]
          Length = 344

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDENGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +E        YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDENGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180381|gb|AFP73329.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|146078033|ref|XP_001463431.1| cathepsin L-like protease [Leishmania infantum JPCM5]
 gi|134067516|emb|CAM65796.1| cathepsin L-like protease [Leishmania infantum JPCM5]
          Length = 381

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 161/316 (50%), Gaps = 22/316 (6%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN--GGVV 377
           CWAFSAVG +E+  A  G+ L  LS QQLV CD  + GCNGG M  A ++++ +  G V 
Sbjct: 150 CWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   CL   +     ++  Y  IP   E  M  W+A  GP+++ ++A+
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDAS 268

Query: 437 GLFYYSGGVIDLNQRLYGTSIPYWIVKNSWGSDWGEK--VEDKVGSSGNRTRDLELTGVL 494
               Y  GV+ +     G  +PYW++KNSWG DWGEK  V   +G +     +  ++  +
Sbjct: 269 SFMSYQSGVLLVGYNKTG-GVPYWVIKNSWGEDWGEKGYVRVAMGLNACLLSEYPVSAHV 327

Query: 495 PSKLSRLATEKLVDCD 510
           P  L+  +T     C+
Sbjct: 328 PQSLTPGSTASGNSCE 343



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 26/158 (16%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L  L+ ++LV CD  + GCNGG M  A ++++ +  G V ++++YPY +   +   CL  
Sbjct: 170 LVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNS 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +     ++  Y  IP   E  M  W+A  GP+++ ++A+    Y  GV+          
Sbjct: 230 SKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDASSFMSYQSGVL---------- 278

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                  +VGY     K G  +PYW++KNSWG DWGEK
Sbjct: 279 -------LVGY----NKTG-GVPYWVIKNSWGEDWGEK 304



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A  G+ L  LS Q 
Sbjct: 134 EKGAVTPVKDQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQ 177


>gi|350535639|ref|NP_001233949.1| phytophthora-inhibited protease 1 [Solanum lycopersicum]
 gi|108937128|gb|ABG23376.1| phytophthora-inhibited protease 1 [Solanum lycopersicum]
          Length = 345

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 155/312 (49%), Gaps = 45/312 (14%)

Query: 187 IQGNNLTELSVQ--------HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFG 238
           +   NL ELS+         HH +VY    +   R + F  NVE  E +    +      
Sbjct: 27  VTSRNLKELSMLERHENWMVHHGRVYKDDIEKEHRFKTFKENVEFIESFNKNGTQRYKLA 86

Query: 239 VNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPE 298
           VNK+ DL+  +    + + LD++L           S  ++     +F+++S+    ++P 
Sbjct: 87  VNKYADLTTEEFTT-SFMGLDTSL----------LSQQESTATTTSFKYDSVT---EVPN 132

Query: 299 AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGC 358
           + DWR  G ++ VK+QG C CCWAFSA   +E  + I  N L  LS QQL+DC   N GC
Sbjct: 133 SMDWRKRGSVTGVKDQGVCGCCWAFSAAAAIEGAYQIANNELISLSEQQLLDCSTQNKGC 192

Query: 359 NGGRMDDALQYIIDN--GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
            GG M  A  +++ N  GG+ ++  YPY+  E++  C    E+   V +  Y  +P  E 
Sbjct: 193 EGGLMTVAYDFLLQNNGGGITTETNYPYE--EAQNVCKT--EQPAAVTINGYEVVPSDES 248

Query: 417 EEMKKWVATRGPLSVGMNANGLFY-YSGGVID--LNQRL--------YGTS----IPYWI 461
             +K  V    P+SVG+ AN  F+ Y  G+ D   N RL        YGTS      YWI
Sbjct: 249 SLLKAVV--NQPISVGIAANDEFHMYGSGIYDGSCNSRLNHAVTVIGYGTSEEDGTKYWI 306

Query: 462 VKNSWGSDWGEK 473
           VKNSWGSDWGE+
Sbjct: 307 VKNSWGSDWGEE 318



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 94/163 (57%), Gaps = 16/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG 550
           +  ++L  L+ ++L+DC   N GC GG M  A  +++ N  GG+ ++  YPY+  E++  
Sbjct: 169 IANNELISLSEQQLLDCSTQNKGCEGGLMTVAYDFLLQNNGGGITTETNYPYE--EAQNV 226

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY-YSGGVIDLNQR 609
           C    E+   V +  Y  +P  E   +K  V    P+SVG+ AN  F+ Y  G+ D +  
Sbjct: 227 CKT--EQPAAVTINGYEVVPSDESSLLKAVV--NQPISVGIAANDEFHMYGSGIYDGS-- 280

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            CN +  NHA+ ++GYG  E+ DGT   YWIVKNSWGSDWGE+
Sbjct: 281 -CNSRL-NHAVTVIGYGTSEE-DGT--KYWIVKNSWGSDWGEE 318



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 14/160 (8%)

Query: 40  SPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSD 99
           S + R  N+M  H +VY    +   R + F  NVE  E + +  +      VNK+ DL+ 
Sbjct: 36  SMLERHENWMVHHGRVYKDDIEKEHRFKTFKENVEFIESFNKNGTQRYKLAVNKYADLTT 95

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
            +    + + LD++L           S  ++     +F+++S+    ++P + DWR  G 
Sbjct: 96  EEFTT-SFMGLDTSL----------LSQQESTATTTSFKYDSVT---EVPNSMDWRKRGS 141

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++ VK+QG C CCWAFSA   +E  + I  N L  LS Q 
Sbjct: 142 VTGVKDQGVCGCCWAFSAAAAIEGAYQIANNELISLSEQQ 181


>gi|12024965|gb|AAG45727.1| cathepsin L-like cysteine protease [Leishmania chagasi]
          Length = 381

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 160/316 (50%), Gaps = 22/316 (6%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN--GGVV 377
           CWAFSAVG +E+  A  G+ L  LS QQLV CD  + GCNGG M  A ++++ +  G V 
Sbjct: 150 CWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   CL   +     ++  Y  IP   E  M  W+A  GP+++ ++A+
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDAS 268

Query: 437 GLFYYSGGVIDLNQRLYGTSIPYWIVKNSWGSDWGEK--VEDKVGSSGNRTRDLELTGVL 494
               Y  GV+ +     G  +PYW++KNSWG DWGEK  V   +G +     +  ++  +
Sbjct: 269 SFMSYQSGVLLVGYNKTG-GVPYWVIKNSWGEDWGEKGYVRVAMGLNACLLSEYPVSAHV 327

Query: 495 PSKLSRLATEKLVDCD 510
           P  L+  +T     C+
Sbjct: 328 PQSLTPGSTASGNSCE 343



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 26/158 (16%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L  L+ ++LV CD  + GCNGG M  A ++++ +  G V ++++YPY +   +   CL  
Sbjct: 170 LVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNS 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +     ++  Y  IP   E  M  W+A  GP+++ ++A+    Y  GV+          
Sbjct: 230 SKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDASSFMSYQSGVL---------- 278

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                  +VGY     K G  +PYW++KNSWG DWGEK
Sbjct: 279 -------LVGY----NKTG-GVPYWVIKNSWGEDWGEK 304



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG C  CWAFSAVG +E+  A  G+ L  LS Q 
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQ 177


>gi|400180457|gb|AFP73365.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F  N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FIINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F  N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FIINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|356515050|ref|XP_003526214.1| PREDICTED: vignain-like [Glycine max]
          Length = 344

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 163/320 (50%), Gaps = 39/320 (12%)

Query: 175 FSAVGVVEAM----HAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE 230
           F AVG+ + M    H        E  +  + K+Y    +  +R + F  NVE  E + + 
Sbjct: 16  FLAVGISQVMPRKLHQTALRERHENWMAEYGKIYKDAAEKEKRFQIFKDNVEFIESFNAA 75

Query: 231 DSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSL 290
            +     GVN   DL+  + +            D +  L+  +  + T  ++  F++ ++
Sbjct: 76  GNKPYKLGVNHLADLTLEEFK------------DSRNGLKRTYEFSTTTFKLNGFKYENV 123

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQG-KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
               D+PEA DWR +G ++ +K+QG +C  CWAFS V   E ++ I    L  LS Q+LV
Sbjct: 124 T---DIPEAIDWRVKGAVTPIKDQGDQCGSCWAFSTVAATEGIYQISTGMLMSLSEQELV 180

Query: 350 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
           DCD  + GC+GG M+D  ++II NGG+ S+  YPY A +    C   +E     ++K Y 
Sbjct: 181 DCDSVDHGCDGGLMEDGFEFIIKNGGISSEANYPYTAVDGT--CDASKEASPAAQIKGYE 238

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI------DLNQRL----YGT-- 455
            +P   EE +++ VA + P+SV ++A  +G  +YS GV        L+  +    YGT  
Sbjct: 239 TVPANSEEALQQAVANQ-PVSVSIDAGGSGFQFYSSGVFTGQCGTQLDHGVTVVGYGTTD 297

Query: 456 --SIPYWIVKNSWGSDWGEK 473
             +  YWIVKNSWG+ WGE+
Sbjct: 298 DGTHEYWIVKNSWGTQWGEE 317



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 93/157 (59%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  + GC+GG M+D  ++II NGG+ S+  YPY A +    C   +E 
Sbjct: 171 LMSLSEQELVDCDSVDHGCDGGLMEDGFEFIIKNGGISSEANYPYTAVDGT--CDASKEA 228

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCNPKA 615
               ++K Y  +P   EE +++ VA + P+SV ++A  +G  +YS GV       C  + 
Sbjct: 229 SPAAQIKGYETVPANSEEALQQAVANQ-PVSVSIDAGGSGFQFYSSGVFTGQ---CGTQL 284

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H + +VGYG  +  DGT   YWIVKNSWG+ WGE+
Sbjct: 285 -DHGVTVVGYGTTD--DGTH-EYWIVKNSWGTQWGEE 317



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 16/184 (8%)

Query: 16  YLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           ++    + +A+  S +   + +  +   R  N+M ++ K+Y    +  +R + F  NVE 
Sbjct: 9   HMLALFLFLAVGISQVMPRKLHQTALRERHENWMAEYGKIYKDAAEKEKRFQIFKDNVEF 68

Query: 76  AEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMR 135
            E +    +      VN   DL+  + +            D +  L+  +  + T  ++ 
Sbjct: 69  IESFNAAGNKPYKLGVNHLADLTLEEFK------------DSRNGLKRTYEFSTTTFKLN 116

Query: 136 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG-KCACCWAFSAVGVVEAMHAIQGNNLTE 194
            F++ ++    D+PEA DWR +G ++ +K+QG +C  CWAFS V   E ++ I    L  
Sbjct: 117 GFKYENVT---DIPEAIDWRVKGAVTPIKDQGDQCGSCWAFSTVAATEGIYQISTGMLMS 173

Query: 195 LSVQ 198
           LS Q
Sbjct: 174 LSEQ 177


>gi|297598407|ref|NP_001045533.2| Os01g0971400 [Oryza sativa Japonica Group]
 gi|15289977|dbj|BAB63672.1| putative cysteine protease CP1 [Oryza sativa Japonica Group]
 gi|125529282|gb|EAY77396.1| hypothetical protein OsI_05384 [Oryza sativa Indica Group]
 gi|125573472|gb|EAZ14987.1| hypothetical protein OsJ_04922 [Oryza sativa Japonica Group]
 gi|215740756|dbj|BAG97412.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215741010|dbj|BAG97505.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765325|dbj|BAG87022.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215767338|dbj|BAG99566.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255674119|dbj|BAF07447.2| Os01g0971400 [Oryza sativa Japonica Group]
          Length = 365

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/304 (36%), Positives = 160/304 (52%), Gaps = 40/304 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  + K YSS+E+ LRR E F  N+   ++   + +G  + G+N+F DL+  + +
Sbjct: 51  LFEKFMAKYRKAYSSLEEKLRRFEVFKDNLNHIDEENKKITGYWL-GLNEFADLTHDEFK 109

Query: 252 Q-LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
               GL L             P   N  D   R  +  +      LP+  DWR +G +++
Sbjct: 110 AAYLGLTL------------TPARRNSNDQLFRYEEVEAA----SLPKEVDWRKKGAVTE 153

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQY 369
           VK QG+C  CWAFS V  VE ++AI   +LT LS Q+L+DCD   N GC+GG MD A  Y
Sbjct: 154 VKNQGQCGSCWAFSTVAAVEGINAIVTGNLTRLSEQELIDCDTDGNNGCSGGLMDYAFSY 213

Query: 370 IIDNGGVVSDQAYPYKASES--ERGCLVGEEEG---FKVKVKEYSRIPYGEEEEMKKWVA 424
           I  NGG+ ++++YPY   E    RG   G+++G     V +  Y  +P   E+ + K +A
Sbjct: 214 IAANGGLHTEESYPYLMEEGTCRRGSTEGDDDGEAAAAVTISGYEDVPRNNEQALLKALA 273

Query: 425 TRGPLSVGMNANG--LFYYSGGVID--LNQRL--------YGTSIP---YWIVKNSWGSD 469
            + P+SV + A+G    +YSGGV D     RL        YGT+     Y IVKNSWGS 
Sbjct: 274 HQ-PVSVAIEASGRNFQFYSGGVFDGPCGTRLDHGVTAVGYGTASKGHDYIIVKNSWGSH 332

Query: 470 WGEK 473
           WGEK
Sbjct: 333 WGEK 336



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 95/173 (54%), Gaps = 21/173 (12%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES- 547
           +  ++   L+RL+ ++L+DCD   N GC+GG MD A  YI  NGG+ ++++YPY   E  
Sbjct: 175 INAIVTGNLTRLSEQELIDCDTDGNNGCSGGLMDYAFSYIAANGGLHTEESYPYLMEEGT 234

Query: 548 -ERGCLVGEEEG---FKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSG 601
             RG   G+++G     V +  Y  +P   E+ + K +A + P+SV + A+G    +YSG
Sbjct: 235 CRRGSTEGDDDGEAAAAVTISGYEDVPRNNEQALLKALAHQ-PVSVAIEASGRNFQFYSG 293

Query: 602 GVID--LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           GV D     RL      +H +  VGYG   K       Y IVKNSWGS WGEK
Sbjct: 294 GVFDGPCGTRL------DHGVTAVGYGTASKGH----DYIIVKNSWGSHWGEK 336



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 18/155 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  FM  + K YSS+E+ LRR E F  N+   ++  ++ +G  +  +N+F DL+  + + 
Sbjct: 52  FEKFMAKYRKAYSSLEEKLRRFEVFKDNLNHIDEENKKITGYWL-GLNEFADLTHDEFKA 110

Query: 105 -LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
              GL L             P   N  D   R  +  +      LP+  DWR +G +++V
Sbjct: 111 AYLGLTL------------TPARRNSNDQLFRYEEVEAA----SLPKEVDWRKKGAVTEV 154

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG+C  CWAFS V  VE ++AI   NLT LS Q
Sbjct: 155 KNQGQCGSCWAFSTVAAVEGINAIVTGNLTRLSEQ 189


>gi|400180353|gb|AFP73315.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F  N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FIINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F  N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FIINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|356517184|ref|XP_003527269.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 350

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 158/298 (53%), Gaps = 39/298 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K+Y S+E+ L R E F  N+ K  D +++       G+N+F DLS  + +
Sbjct: 47  LFESWISRHGKIYQSIEEKLHRFEIFKDNL-KHIDERNKVVSNYWLGLNEFADLSHQEFK 105

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL +D +     P                 F +  +    +LP++ DWR +G +++
Sbjct: 106 NKYLGLKVDYSRRRESP---------------EEFTYKDV----ELPKSVDWRKKGAVTQ 146

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  +
Sbjct: 147 VKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSF 206

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I++N G+  ++ YPY   E    C + +EE   V +  Y  +P   E+ + K +A + PL
Sbjct: 207 IVENDGLHKEEDYPYIMEEGT--CEMAKEETEVVTISGYHDVPQNNEQSLLKALANQ-PL 263

Query: 430 SVGMNANG--LFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV       DL+  +    YGT+  + Y  VKNSWGS WGEK
Sbjct: 264 SVAIEASGRDFQFYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYITVKNSWGSKWGEK 321



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  +I++N G+  ++ YPY   E    C
Sbjct: 171 IVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSFIVENDGLHKEEDYPYIMEEGT--C 228

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +EE   V +  Y  +P   E+ + K +A + PLSV + A+G    +YSGGV D +  
Sbjct: 229 EMAKEETEVVTISGYHDVPQNNEQSLLKALANQ-PLSVAIEASGRDFQFYSGGVFDGH-- 285

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H +  VGYG  +  D     Y  VKNSWGS WGEK
Sbjct: 286 -CGSDL-DHGVAAVGYGTAKGVD-----YITVKNSWGSKWGEK 321



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 21/162 (12%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           ++  +  F +++  H K+Y S+E+ L R E F  N++  ++  +  S   +  +N+F DL
Sbjct: 41  MDKLIELFESWISRHGKIYQSIEEKLHRFEIFKDNLKHIDERNKVVSNYWL-GLNEFADL 99

Query: 98  SDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           S  + + +  GL +D +     P                 F +  +    +LP++ DWR 
Sbjct: 100 SHQEFKNKYLGLKVDYSRRRESP---------------EEFTYKDV----ELPKSVDWRK 140

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +G +++VK QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 141 KGAVTQVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 182


>gi|401758208|gb|AFQ01139.1| cathepsin F-like protease, partial [Chilo suppressalis]
          Length = 537

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 162/324 (50%), Gaps = 47/324 (14%)

Query: 175 FSAVGVVEAMHAIQGNNL--TELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS 232
           + A  + +  H +Q   L    ++    + +   VE + +R E F  NV+K  +  + + 
Sbjct: 213 YQAGAMTDMYHHVQAEQLFFNFITTYKPEYINDHVE-MTKRFEIFKENVKKIHELNTHER 271

Query: 233 GTAVFGVNKFFDLSESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 291
           GT V+ V +F DL+  + + +  GLN         P+L+ P   NQ    MR  +   + 
Sbjct: 272 GTGVYAVTRFTDLTYEEFKSKYLGLN---------PNLKKP---NQI--PMRQAEIPKVH 317

Query: 292 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC 351
               LP +FDWR  G +++VK+QG C  CWAFS  G +E    ++   L  LS Q+LVDC
Sbjct: 318 Q---LPASFDWRPLGAVTEVKDQGACGSCWAFSVTGNIEGQWKLKTGKLLSLSEQELVDC 374

Query: 352 DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI 411
           D  + GC+GG MD+A + I   GG+ +++ YPY+A + +  C   +    KV++     I
Sbjct: 375 DKMDDGCDGGYMDNAYRAIEQLGGLETEEEYPYEAEDDK--CSFNKSLS-KVQISGAVNI 431

Query: 412 PYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV------------IDL----------N 449
               E  M KW+   GP+S+G+NAN + +Y GGV            ID            
Sbjct: 432 S-SNETNMAKWLVHNGPISIGINANAMQFYVGGVSHPWKALCNPKNIDHGVLIVGYGIKE 490

Query: 450 QRLYGTSIPYWIVKNSWGSDWGEK 473
             L+   +PYW+VKNSWG  WGE+
Sbjct: 491 YPLFNKQLPYWVVKNSWGPGWGEQ 514



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 96/157 (61%), Gaps = 5/157 (3%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GC+GG MD+A + I   GG+ +++ YPY+A + +  C   + 
Sbjct: 362 KLLSLSEQELVDCDKMDDGCDGGYMDNAYRAIEQLGGLETEEEYPYEAEDDK--CSFNKS 419

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
              KV++     I    E  M KW+   GP+S+G+NAN + +Y GGV    + LCNPK  
Sbjct: 420 LS-KVQISGAVNIS-SNETNMAKWLVHNGPISIGINANAMQFYVGGVSHPWKALCNPKNI 477

Query: 617 NHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +H ++IVGYG +E       +PYW+VKNSWG  WGE+
Sbjct: 478 DHGVLIVGYGIKEYPLFNKQLPYWVVKNSWGPGWGEQ 514



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 19/156 (12%)

Query: 45  FLNFMRDHDKVYSSVE-DLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           F NF+  +   Y +   ++ +R E F  NV+K  +    + GT V+ V +F DL+  + +
Sbjct: 231 FFNFITTYKPEYINDHVEMTKRFEIFKENVKKIHELNTHERGTGVYAVTRFTDLTYEEFK 290

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            +  GLN         P+L+ P   NQ    MR  +   +     LP +FDWR  G +++
Sbjct: 291 SKYLGLN---------PNLKKP---NQI--PMRQAEIPKVHQ---LPASFDWRPLGAVTE 333

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG C  CWAFS  G +E    ++   L  LS Q
Sbjct: 334 VKDQGACGSCWAFSVTGNIEGQWKLKTGKLLSLSEQ 369


>gi|356564154|ref|XP_003550321.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 476

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 152/295 (51%), Gaps = 47/295 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H KVY+++ +  +R + F  N+   +D+ S +  T   G+N+F DL+  + +        
Sbjct: 66  HGKVYNALGEKEKRFQIFKDNLRFIDDHNSAEDRTYKLGLNRFADLTNEEYR-------- 117

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH----GDDLPEAFDWRAEGVISKVKEQG 315
                      A +   + D   R  +  S R+    GD LP++ DWR EG +  VK+QG
Sbjct: 118 -----------AKYLGTKIDPNRRLGKTPSNRYAPRVGDKLPDSVDWRKEGAVPPVKDQG 166

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNG 374
            C  CWAFSA+G VE ++ I    L  LS Q+LVDCD   N GCNGG MD A ++II+NG
Sbjct: 167 GCGSCWAFSAIGAVEGINKIVTGELISLSEQELVDCDTGYNQGCNGGLMDYAFEFIINNG 226

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ SD+ YPY+  +    C    +    V + +Y  +P  +E  +KK VA + P+SV + 
Sbjct: 227 GIDSDEDYPYRGVDGR--CDTYRKNAKVVSIDDYEDVPAYDELALKKAVANQ-PVSVAIE 283

Query: 435 ANGL---FYYSG------------GVIDLNQRLYGTSI--PYWIVKNSWGSDWGE 472
             G     Y SG            GV+ +    YGT+    YWIV+NSWGS WGE
Sbjct: 284 GGGREFQLYVSGVFTGRCGTALDHGVVAVG---YGTAKGHDYWIVRNSWGSSWGE 335



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  +L  L+ ++LVDCD   N GCNGG MD A ++II+NGG+ SD+ YPY+  +  
Sbjct: 183 INKIVTGELISLSEQELVDCDTGYNQGCNGGLMDYAFEFIINNGGIDSDEDYPYRGVDGR 242

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V + +Y  +P  +E  +KK VA + P+SV +   G  +  Y  GV   
Sbjct: 243 --CDTYRKNAKVVSIDDYEDVPAYDELALKKAVANQ-PVSVAIEGGGREFQLYVSGVF-- 297

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   A +H ++ VGYG  +  D     YWIV+NSWGS WGE
Sbjct: 298 -TGRCG-TALDHGVVAVGYGTAKGHD-----YWIVRNSWGSSWGE 335



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 23/161 (14%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           ++ +  ++  H KVY+++ +  +R + F  N+   +D+   +  T    +N+F DL++ +
Sbjct: 56  MSMYEQWLVKHGKVYNALGEKEKRFQIFKDNLRFIDDHNSAEDRTYKLGLNRFADLTNEE 115

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH----GDDLPEAFDWRAE 157
            +                   A +   + D   R  +  S R+    GD LP++ DWR E
Sbjct: 116 YR-------------------AKYLGTKIDPNRRLGKTPSNRYAPRVGDKLPDSVDWRKE 156

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G +  VK+QG C  CWAFSA+G VE ++ I    L  LS Q
Sbjct: 157 GAVPPVKDQGGCGSCWAFSAIGAVEGINKIVTGELISLSEQ 197


>gi|400180422|gb|AFP73349.1| cysteine protease [Solanum chmielewskii]
          Length = 344

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKTNDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +YSGG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYSGGTYDGSCADRINHAVTAIGYGTDEEGQKYWLLKNSWGTSWGE 315



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +YSGG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYSGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +E+       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEEGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISIFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKTNDLSD-DDMPSNLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|222629922|gb|EEE62054.1| hypothetical protein OsJ_16838 [Oryza sativa Japonica Group]
          Length = 336

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 160/300 (53%), Gaps = 32/300 (10%)

Query: 189 GNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSES 248
           G N  E S+  + K Y+S E+ +RR E F  N+   +D   + + +   G+N+F DL+  
Sbjct: 25  GRNGGEFSIVGYRKAYASFEEKVRRFEVFKDNLNHIDDINKKVT-SYWLGLNEFADLTHD 83

Query: 249 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 308
           + +        +T   + P    P  SN        F++  + +G+ +P+  DWR +  +
Sbjct: 84  EFK--------ATYLGLTP---PPTRSNSKHYSSEEFRYGKMSNGE-VPKEMDWRKKNAV 131

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDAL 367
           ++VK QG+C  CWAFS V  VE ++AI   +LT LS Q+L+DC    N GCNGG MD A 
Sbjct: 132 TEVKNQGQCGSCWAFSTVAAVEGINAIVTGNLTSLSEQELIDCSTDGNNGCNGGLMDYAF 191

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
            YI   GG+ +++AYPY   E +  C  G+     V +  Y  +P  +E+ + K +A + 
Sbjct: 192 SYIASTGGLRTEEAYPYAMEEGD--CDEGKGAAV-VTISGYEDVPANDEQALVKALAHQ- 247

Query: 428 PLSVGMNANG--LFYYSGGVID--LNQRL--------YGTSI--PYWIVKNSWGSDWGEK 473
           P+SV + A+G    +YSGGV D    ++L        YGTS    Y IVKNSWG  WGEK
Sbjct: 248 PVSVAIEASGRHFQFYSGGVFDGPCGEQLDHGVTAVGYGTSKGQDYIIVKNSWGPHWGEK 307



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DC    N GCNGG MD A  YI   GG+ +++AYPY   E +
Sbjct: 155 INAIVTGNLTSLSEQELIDCSTDGNNGCNGGLMDYAFSYIASTGGLRTEEAYPYAMEEGD 214

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C  G+     V +  Y  +P  +E+ + K +A + P+SV + A+G    +YSGGV D 
Sbjct: 215 --CDEGKGAAV-VTISGYEDVPANDEQALVKALAHQ-PVSVAIEASGRHFQFYSGGVFD- 269

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  +  +H +  VGYG  + +D     Y IVKNSWG  WGEK
Sbjct: 270 --GPCGEQL-DHGVTAVGYGTSKGQD-----YIIVKNSWGPHWGEK 307



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLD 111
           + K Y+S E+ +RR E F  N+   +D  ++ + +    +N+F DL+  + +        
Sbjct: 36  YRKAYASFEEKVRRFEVFKDNLNHIDDINKKVT-SYWLGLNEFADLTHDEFK-------- 86

Query: 112 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 171
           +T   + P    P  SN        F++  + +G+ +P+  DWR +  +++VK QG+C  
Sbjct: 87  ATYLGLTP---PPTRSNSKHYSSEEFRYGKMSNGE-VPKEMDWRKKNAVTEVKNQGQCGS 142

Query: 172 CWAFSAVGVVEAMHAIQGNNLTELSVQH----------------HDKVYSSVEDL--LRR 213
           CWAFS V  VE ++AI   NLT LS Q                  D  +S +     LR 
Sbjct: 143 CWAFSTVAAVEGINAIVTGNLTSLSEQELIDCSTDGNNGCNGGLMDYAFSYIASTGGLRT 202

Query: 214 HENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
            E +   +E+ +    E  G AV  ++ + D+  +D Q L
Sbjct: 203 EEAYPYAMEEGD--CDEGKGAAVVTISGYEDVPANDEQAL 240


>gi|18394919|ref|NP_564126.1| Xylem cysteine proteinase 2 [Arabidopsis thaliana]
 gi|71153409|sp|Q9LM66.2|XCP2_ARATH RecName: Full=Xylem cysteine proteinase 2; Short=AtXCP2; Flags:
           Precursor
 gi|4836904|gb|AAD30607.1|AC007369_17 Putative cysteine proteinase [Arabidopsis thaliana]
 gi|6708183|gb|AAF25832.1|AF191028_1 papain-type cysteine endopeptidase XCP2 [Arabidopsis thaliana]
 gi|28466959|gb|AAO44088.1| At1g20850 [Arabidopsis thaliana]
 gi|110743795|dbj|BAE99733.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332191910|gb|AEE30031.1| Xylem cysteine proteinase 2 [Arabidopsis thaliana]
          Length = 356

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 163/298 (54%), Gaps = 36/298 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  + + +K Y +VE+   R E F  N+ K  D  ++   +   G+N+F DLS  + +
Sbjct: 50  LFENWISNFEKAYETVEEKFLRFEVFKDNL-KHIDETNKKGKSYWLGLNEFADLSHEEFK 108

Query: 252 QL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           ++  GL  D    D                E R++   + R  + +P++ DWR +G +++
Sbjct: 109 KMYLGLKTDIVRRD----------------EERSYAEFAYRDVEAVPKSVDWRKKGAVAE 152

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A +Y
Sbjct: 153 VKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEY 212

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I+ NGG+  ++ YPY  S  E  C + ++E   V +  +  +P  +E+ + K +A + PL
Sbjct: 213 IVKNGGLRKEEDYPY--SMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQ-PL 269

Query: 430 SVGMNANG--LFYYSGGV------IDLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV ++A+G    +YSGGV      +DL+  +    YG+S    Y IVKNSWG  WGEK
Sbjct: 270 SVAIDASGREFQFYSGGVFDGRCGVDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEK 327



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DCD + N GCNGG MD A +YI+ NGG+  ++ YPY  S  E
Sbjct: 174 INKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPY--SMEE 231

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C + ++E   V +  +  +P  +E+ + K +A + PLSV ++A+G    +YSGGV D 
Sbjct: 232 GTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQ-PLSVAIDASGREFQFYSGGVFDG 290

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C     +H +  VGYG  +  D     Y IVKNSWG  WGEK
Sbjct: 291 R---CGVDL-DHGVAAVGYGSSKGSD-----YIIVKNSWGPKWGEK 327



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 18/158 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +  F N++ + +K Y +VE+   R E F  N++  ++  ++   +    +N+F DLS  +
Sbjct: 48  IELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGK-SYWLGLNEFADLSHEE 106

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            +++  GL  D    D                E R++   + R  + +P++ DWR +G +
Sbjct: 107 FKKMYLGLKTDIVRRD----------------EERSYAEFAYRDVEAVPKSVDWRKKGAV 150

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++VK QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 151 AEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQ 188


>gi|400180375|gb|AFP73326.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENIKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GC+GG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S+  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISSESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GC+GG M +A  +I +NGG+ S+  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIKENGGISSESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  S   QTR      ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MSILITLFFVISMFNS---QTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENIKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|125551397|gb|EAY97106.1| hypothetical protein OsI_19029 [Oryza sativa Indica Group]
          Length = 350

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 170/341 (49%), Gaps = 47/341 (13%)

Query: 171 CCWAFSAVGVVEAMHAIQGNNLTELSVQH------HDKVYSSVEDLLRRHENFVTNVEKA 224
           C ++ S   +V A   + G+    ++ +H      H +VY    +  RR E F  NV   
Sbjct: 18  CLYSSSGGAIVAAARELGGD--AAMAARHERWMAQHGRVYKDAAEKARRLEVFKANVAFI 75

Query: 225 EDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRA 284
           E + +        GVN+F DL+  + +        +T+ + +     P +  +  T    
Sbjct: 76  ESFNAGGKNRYWLGVNQFADLTSEEFK--------ATMTNSK-GFSTPNNGVRVST---G 123

Query: 285 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELS 344
           F++ ++   D LP + DWR +G ++++K+QG+C CCWAFSAV  +E +  +    L  LS
Sbjct: 124 FKYENV-SADALPASVDWRTKGAVTRIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLS 182

Query: 345 VQQLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 402
            Q+LVDCD+  ++ GC GG +D A Q+I+ NGG+ ++  YPY A +    C         
Sbjct: 183 EQELVDCDVDGNDQGCEGGEIDGAFQFILSNGGLTAEANYPYTAEDGR--CKTTAAADVA 240

Query: 403 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI------DLNQRL---- 452
             ++ Y  +P  +E  + K VA + P+SV ++A+   +Y GGV+       L+  +    
Sbjct: 241 ASIRGYEDVPANDEPSLMKAVAGQ-PVSVAVDASKFQFYGGGVMAGECGTSLDHGVTVIG 299

Query: 453 YGTS---IPYWIVKNSWGSDWGEK--------VEDKVGSSG 482
           YG +     YW+VKNSWG+ WGE         ++DK G  G
Sbjct: 300 YGAASDGTKYWLVKNSWGTTWGEAGYLRMEKDIDDKRGMCG 340



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 13/161 (8%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+  ++ GC GG +D A Q+I+ NGG+ ++  YPY A +    C   
Sbjct: 177 KLISLSEQELVDCDVDGNDQGCEGGEIDGAFQFILSNGGLTAEANYPYTAEDGR--CKTT 234

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
                   ++ Y  +P  +E  + K VA + P+SV ++A+   +Y GGV+      C   
Sbjct: 235 AAADVAASIRGYEDVPANDEPSLMKAVAGQ-PVSVAVDASKFQFYGGGVMAGE---CG-T 289

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           + +H + ++GYG     DGT   YW+VKNSWG+ WGE   L
Sbjct: 290 SLDHGVTVIGYG--AASDGTK--YWLVKNSWGTTWGEAGYL 326



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 13/158 (8%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
             R   +M  H +VY    +  RR E F  NV   E +           VN+F DL+  +
Sbjct: 41  AARHERWMAQHGRVYKDAAEKARRLEVFKANVAFIESFNAGGKNRYWLGVNQFADLTSEE 100

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +        +T+ + +     P +  +  T    F++ ++   D LP + DWR +G ++
Sbjct: 101 FK--------ATMTNSK-GFSTPNNGVRVST---GFKYENV-SADALPASVDWRTKGAVT 147

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++K+QG+C CCWAFSAV  +E +  +    L  LS Q 
Sbjct: 148 RIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQE 185


>gi|255567869|ref|XP_002524912.1| cysteine protease, putative [Ricinus communis]
 gi|223535747|gb|EEF37409.1| cysteine protease, putative [Ricinus communis]
          Length = 366

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 155/297 (52%), Gaps = 49/297 (16%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+ + +  +R E F  N+   +++ +  + T   G+ +F DL+  + +        
Sbjct: 55  HSKTYNKLGEREKRFEIFKNNLRFIDEHNNSKNRTYKVGLTRFADLTNEEYR-------- 106

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAF------QFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                      A F   ++D + R        Q  + + GD LPE+ DWR  G +S +K+
Sbjct: 107 -----------AKFLGTKSDPKRRLMKSKNPSQRYAFKAGDVLPESIDWRQSGAVSAIKD 155

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIID 372
           QG C  CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD+A Q+II+
Sbjct: 156 QGSCGSCWAFSTIAAVEGVNKIVTGELISLSEQELVDCDRSYNAGCNGGLMDNAFQFIIN 215

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ +D+ YPY+A + +  C   + +   V +  +  +   +E  ++K VA + P+SV 
Sbjct: 216 NGGIDTDKDYPYQAVDGK--CDTTKVKNKAVTIDGFEDVMAFDEMALQKAVAHQ-PVSVA 272

Query: 433 MNANGL---FYYSG------------GVIDLNQRLYGT--SIPYWIVKNSWGSDWGE 472
           + A+G+   FY SG            GV+ +    YGT   I YW+V+NSWG DWGE
Sbjct: 273 IEASGMALQFYQSGVFTGECGSALDHGVVIVG---YGTEDGIDYWLVRNSWGRDWGE 326



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  +L  L+ ++LVDCD S N GCNGG MD+A Q+II+NGG+ +D+ YPY+A + +  C
Sbjct: 177 IVTGELISLSEQELVDCDRSYNAGCNGGLMDNAFQFIINNGGIDTDKDYPYQAVDGK--C 234

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              + +   V +  +  +   +E  ++K VA + P+SV + A+G  L +Y  GV      
Sbjct: 235 DTTKVKNKAVTIDGFEDVMAFDEMALQKAVAHQ-PVSVAIEASGMALQFYQSGVFTGE-- 291

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H ++IVGYG E+      I YW+V+NSWG DWGE
Sbjct: 292 -CGS-ALDHGVVIVGYGTED-----GIDYWLVRNSWGRDWGE 326



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 25/166 (15%)

Query: 39  NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLS 98
           N  ++ +  ++  H K Y+ + +  +R E F  N+   +++    + T    + +F DL+
Sbjct: 42  NEVISMYNWWLAKHSKTYNKLGEREKRFEIFKNNLRFIDEHNNSKNRTYKVGLTRFADLT 101

Query: 99  DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAF------QFNSLRHGDDLPEAF 152
           + + +                   A F   ++D + R        Q  + + GD LPE+ 
Sbjct: 102 NEEYR-------------------AKFLGTKSDPKRRLMKSKNPSQRYAFKAGDVLPESI 142

Query: 153 DWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           DWR  G +S +K+QG C  CWAFS +  VE ++ I    L  LS Q
Sbjct: 143 DWRQSGAVSAIKDQGSCGSCWAFSTIAAVEGVNKIVTGELISLSEQ 188


>gi|5823020|gb|AAD53012.1|AF089849_1 senescence-specific cysteine protease [Brassica napus]
          Length = 344

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 148/291 (50%), Gaps = 35/291 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG-TAVFGVNKFFDLSESDLQQL-TGLN 257
           H +VY+   +   R+  F  NVE+ E      SG T    VN+F DL+  + + + TG  
Sbjct: 45  HGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFADLTNEEFRSMYTGFK 104

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            +S L               + T+  +F++ ++   D LP + DWR +G ++ +K+QG C
Sbjct: 105 GNSVLS--------------SRTKPTSFRYQNVS-SDALPVSVDWRKKGAVTPIKDQGLC 149

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
             CWAFSAV  +E +  I+   L  LS Q+LVDCD ++GGC GG MD A  Y I  GG+ 
Sbjct: 150 GSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTNDGGCMGGLMDTAFNYTITIGGLT 209

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN- 436
           S+  YPYK++     C   + +     +K +  +P  +E+ + K VA   P+S+G+    
Sbjct: 210 SESNYPYKSTNGT--CNFNKTKQIATSIKGFEDVPANDEKALMKAVAHH-PVSIGIAGGD 266

Query: 437 -GLFYYSGGVID----------LNQRLYGTS---IPYWIVKNSWGSDWGEK 473
            G  +YS GV            +    YG S   + YWI+KNSWG  WGE+
Sbjct: 267 IGFQFYSSGVFSGECTTHLDHGVTAVGYGRSKNGLKYWILKNSWGPKWGER 317



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD ++GGC GG MD A  Y I  GG+ S+  YPYK++     C   + 
Sbjct: 171 KLISLSEQELVDCDTNDGGCMGGLMDTAFNYTITIGGLTSESNYPYKSTNGT--CNFNKT 228

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNPK 614
           +     +K +  +P  +E+ + K VA   P+S+G+     G  +YS GV       C   
Sbjct: 229 KQIATSIKGFEDVPANDEKALMKAVAHH-PVSIGIAGGDIGFQFYSSGVFSGE---CTTH 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H +  VGYG    K+G  + YWI+KNSWG  WGE+
Sbjct: 285 L-DHGVTAVGYGRS--KNG--LKYWILKNSWGPKWGER 317



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 17/157 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSG-TAVFEVNKFFDLSDSDL 102
           R   +M +H +VY+   +   R+  F  NVE+ E      SG T    VN+F DL++ + 
Sbjct: 37  RHAEWMTEHGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFADLTNEEF 96

Query: 103 QQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
           + + TG   +S L               + T+  +F++ ++   D LP + DWR +G ++
Sbjct: 97  RSMYTGFKGNSVLS--------------SRTKPTSFRYQNVS-SDALPVSVDWRKKGAVT 141

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +K+QG C  CWAFSAV  +E +  I+   L  LS Q
Sbjct: 142 PIKDQGLCGSCWAFSAVAAIEGVAQIKKGKLISLSEQ 178


>gi|222425026|dbj|BAH20463.1| cysteine protease [Spinacia oleracea]
          Length = 473

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/290 (35%), Positives = 160/290 (55%), Gaps = 29/290 (10%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGLN 257
            H K Y+++ +  +R   F  N+E  + + S+DS T   G+NKF DL+  + + +  G  
Sbjct: 59  QHRKNYNALGEKEKRFAIFKDNLEFIDQHNSDDSQTFKVGLNKFADLTNEEFRSVYLGRK 118

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             S+   +  S ++   S++             + GD+LPEA DWR  G ++KVK+QG+C
Sbjct: 119 KSSSSSPLLSSAKSKVKSDRY----------LFKEGDELPEAVDWRKNGAVAKVKDQGQC 168

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGV 376
             CWAFS +  VE ++ I    L  LS Q+LVDCD S N GC+GG MD A ++II+NGG+
Sbjct: 169 GSCWAFSTIAAVEGINQIVTGELLSLSEQELVDCDTSYNSGCDGGLMDYAYEFIINNGGI 228

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            +D  YPY A + +  C    +    V + ++  +P  +E+ ++K VA + P+SV + A 
Sbjct: 229 DTDADYPYTAKDGK--CDQYRKNAKVVTIDDFEDVPENDEKALQKAVAHQ-PVSVAIEAG 285

Query: 437 G--LFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGE 472
           G    +Y  GV       DL+  +    YG+     YWIV+NSWG+DWGE
Sbjct: 286 GSTFQFYQSGVFTGKCGADLDHGVVAVGYGSDDGKDYWIVRNSWGADWGE 335



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 96/165 (58%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  +L  L+ ++LVDCD S N GC+GG MD A ++II+NGG+ +D  YPY A + +
Sbjct: 183 INQIVTGELLSLSEQELVDCDTSYNSGCDGGLMDYAYEFIINNGGIDTDADYPYTAKDGK 242

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C    +    V + ++  +P  +E+ ++K VA + P+SV + A G    +Y  GV   
Sbjct: 243 --CDQYRKNAKVVTIDDFEDVPENDEKALQKAVAHQ-PVSVAIEAGGSTFQFYQSGVF-- 297

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C     +H ++ VGYG ++ KD     YWIV+NSWG+DWGE
Sbjct: 298 -TGKCGADL-DHGVVAVGYGSDDGKD-----YWIVRNSWGADWGE 335



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 12/171 (7%)

Query: 30  NIFQTRGYLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAV 88
           N+  +    +  V R + +++  H K Y+++ +  +R   F  N+E  + +  +DS T  
Sbjct: 37  NLLPSSSRSDDEVMRIYESWLVQHRKNYNALGEKEKRFAIFKDNLEFIDQHNSDDSQTFK 96

Query: 89  FEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD 147
             +NKF DL++ + + +  G    S+   +  S ++   S++             + GD+
Sbjct: 97  VGLNKFADLTNEEFRSVYLGRKKSSSSSPLLSSAKSKVKSDRY----------LFKEGDE 146

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LPEA DWR  G ++KVK+QG+C  CWAFS +  VE ++ I    L  LS Q
Sbjct: 147 LPEAVDWRKNGAVAKVKDQGQCGSCWAFSTIAAVEGINQIVTGELLSLSEQ 197


>gi|77554625|gb|ABA97421.1| Vignain precursor, putative [Oryza sativa Japonica Group]
 gi|222630746|gb|EEE62878.1| hypothetical protein OsJ_17681 [Oryza sativa Japonica Group]
          Length = 350

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 169/341 (49%), Gaps = 47/341 (13%)

Query: 171 CCWAFSAVGVVEAMHAIQGNNLTELSVQH------HDKVYSSVEDLLRRHENFVTNVEKA 224
           C ++ S   +V A   + G+    ++ +H      H +VY    +  RR E F  NV   
Sbjct: 18  CLYSSSGGAIVAAARELGGD--AAMAARHERWMAQHGRVYKDAAEKARRLEVFKANVAFI 75

Query: 225 EDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRA 284
           E + +        GVN+F DL+  + +        +T+ + +     P +  +  T    
Sbjct: 76  ESFNAGGKNRYWLGVNQFADLTSEEFK--------ATMTNSK-GFSTPNNGVRVST---G 123

Query: 285 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELS 344
           F++ ++   D LP + DWR +G ++++K+QG+C CCWAFSAV  +E    +    L  LS
Sbjct: 124 FKYENV-SADALPASVDWRTKGAVTRIKDQGQCGCCWAFSAVAAMEGFVKLSTGKLISLS 182

Query: 345 VQQLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 402
            Q+LVDCD+  ++ GC GG +D A Q+I+ NGG+ ++  YPY A +    C         
Sbjct: 183 EQELVDCDVDGNDQGCEGGEIDGAFQFILSNGGLTAEANYPYTAEDGR--CKTTAAADVA 240

Query: 403 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI------DLNQRL---- 452
             ++ Y  +P  +E  + K VA + P+SV ++A+   +Y GGV+       L+  +    
Sbjct: 241 ASIRGYEDVPANDEPSLMKAVAGQ-PVSVAVDASKFQFYGGGVMAGECGTSLDHGVTVIG 299

Query: 453 YGTS---IPYWIVKNSWGSDWGEK--------VEDKVGSSG 482
           YG +     YW+VKNSWG+ WGE         ++DK G  G
Sbjct: 300 YGAASDGTKYWLVKNSWGTTWGEAGYLRMEKDIDDKRGMCG 340



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 13/161 (8%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+  ++ GC GG +D A Q+I+ NGG+ ++  YPY A +    C   
Sbjct: 177 KLISLSEQELVDCDVDGNDQGCEGGEIDGAFQFILSNGGLTAEANYPYTAEDGR--CKTT 234

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
                   ++ Y  +P  +E  + K VA + P+SV ++A+   +Y GGV+      C   
Sbjct: 235 AAADVAASIRGYEDVPANDEPSLMKAVAGQ-PVSVAVDASKFQFYGGGVMAGE---CG-T 289

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           + +H + ++GYG     DGT   YW+VKNSWG+ WGE   L
Sbjct: 290 SLDHGVTVIGYG--AASDGTK--YWLVKNSWGTTWGEAGYL 326



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 13/158 (8%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
             R   +M  H +VY    +  RR E F  NV   E +           VN+F DL+  +
Sbjct: 41  AARHERWMAQHGRVYKDAAEKARRLEVFKANVAFIESFNAGGKNRYWLGVNQFADLTSEE 100

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +        +T+ + +     P +  +  T    F++ ++   D LP + DWR +G ++
Sbjct: 101 FK--------ATMTNSK-GFSTPNNGVRVST---GFKYENV-SADALPASVDWRTKGAVT 147

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++K+QG+C CCWAFSAV  +E    +    L  LS Q 
Sbjct: 148 RIKDQGQCGCCWAFSAVAAMEGFVKLSTGKLISLSEQE 185


>gi|400180383|gb|AFP73330.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F  N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FIINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F  N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FIINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|413953668|gb|AFW86317.1| hypothetical protein ZEAMMB73_339067 [Zea mays]
          Length = 433

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 159/312 (50%), Gaps = 48/312 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TG 255
           +  + +VY    +  RR E F  NV+  E + +  +     GVN+F DL+  + +   T 
Sbjct: 134 MAQYSRVYKDASEKARRFEVFKANVQFIESFNAGGNNKFWLGVNQFADLTNDEFRSTKTN 193

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
             L S+      +++ P            F++ ++   D LP   DWR +G ++ +K+QG
Sbjct: 194 KGLKSS------NMKIP----------TGFRYENV-SADALPTTIDWRTKGAVTPIKDQG 236

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDN 373
           +C CCWAFSAV   E +  I    L  L+ Q+LVDCD+   + GC GG MDDA ++II N
Sbjct: 237 QCGCCWAFSAVAATEGIVKISTGKLVSLAEQELVDCDVHGEDQGCEGGLMDDAFKFIIKN 296

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++ +YPY A++ +  C  G        +K Y  +P  +E  + K VA + P+SV +
Sbjct: 297 GGLTTESSYPYTAADGK--CKSGSNSA--ATIKGYEDVPANDEAALMKAVANQ-PVSVAV 351

Query: 434 NANGLF--YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK----- 473
           +   +   +YSGGV+      DL+  +    YG +     YW++KNSWG+ WGE      
Sbjct: 352 DGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWGENGYLRM 411

Query: 474 ---VEDKVGSSG 482
              + DK G  G
Sbjct: 412 EKDISDKRGMCG 423



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 93/159 (58%), Gaps = 17/159 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  LA ++LVDCD+   + GC GG MDDA ++II NGG+ ++ +YPY A++ +  C  G
Sbjct: 260 KLVSLAEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTESSYPYTAADGK--CKSG 317

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P  +E  + K VA + P+SV ++   +   +YSGGV+  +   C 
Sbjct: 318 SNSA--ATIKGYEDVPANDEAALMKAVANQ-PVSVAVDGGDMTFQFYSGGVMTGS---CG 371

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               +H +  +GYG+    DGT   YW++KNSWG+ WGE
Sbjct: 372 TDL-DHGIAAIGYGKTS--DGTK--YWLMKNSWGTTWGE 405



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 18/158 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V R   +M  + +VY    +  RR E F  NV+  E +    +      VN+F DL++ +
Sbjct: 127 VARHEQWMAQYSRVYKDASEKARRFEVFKANVQFIESFNAGGNNKFWLGVNQFADLTNDE 186

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            +   T   L S+      +++ P            F++ ++   D LP   DWR +G +
Sbjct: 187 FRSTKTNKGLKSS------NMKIP----------TGFRYENV-SADALPTTIDWRTKGAV 229

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           + +K+QG+C CCWAFSAV   E +  I    L  L+ Q
Sbjct: 230 TPIKDQGQCGCCWAFSAVAATEGIVKISTGKLVSLAEQ 267


>gi|400180359|gb|AFP73318.1| cysteine protease [Solanum peruvianum]
 gi|400180477|gb|AFP73375.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  S   QTR      ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MSILITLFFVISMFNS---QTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|357116897|ref|XP_003560213.1| PREDICTED: probable cysteine proteinase A494-like [Brachypodium
           distachyon]
          Length = 373

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/308 (34%), Positives = 152/308 (49%), Gaps = 53/308 (17%)

Query: 197 VQHHDKVYSS-VEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLT 254
           V+ H K YS   E+  RR   F  N+ +A  +Q+ D G A  GV  F DL+  + Q +LT
Sbjct: 58  VRRHGKEYSGGAEEYARRLRVFAANLARAAAHQALDPG-ARHGVTPFSDLTPEEFQARLT 116

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
           GL    T  ++      P ++  T  E+             LP +FDWRA+G +++VK Q
Sbjct: 117 GLQQQGTNNNM------PAAARATAEEL-----------ATLPASFDWRAKGAVTEVKMQ 159

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMDD 365
           G C  CWAFS  G VE  H +    L  LS QQLVDCD +         + GC+GG M +
Sbjct: 160 GMCGSCWAFSTTGAVEGAHFVATGKLLNLSEQQLVDCDHTCDAVAKNECDSGCSGGLMTN 219

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
           A  Y+I  GG++   AYPY  ++   G    +     V+V  ++ +P  +E++++  +  
Sbjct: 220 AYTYLIRAGGLMEQAAYPYTGAQ---GTCRFDANKVAVRVTSFTAVPPDDEDQIRASLVR 276

Query: 426 RGPLSVGMNANGLFYYSGGV----------IDLNQRLYGTSI-----------PYWIVKN 464
            GPL+VG+NA  +  Y GGV          I+    L G              PYWI+KN
Sbjct: 277 AGPLAVGLNAAFMQTYLGGVSCPLLCPRKLINHGVLLVGYGARGLAPLRLGYRPYWIIKN 336

Query: 465 SWGSDWGE 472
           SWG +WGE
Sbjct: 337 SWGKEWGE 344



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 18/171 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 543
           V   KL  L+ ++LVDCD +         + GC+GG M +A  Y+I  GG++   AYPY 
Sbjct: 180 VATGKLLNLSEQQLVDCDHTCDAVAKNECDSGCSGGLMTNAYTYLIRAGGLMEQAAYPYT 239

Query: 544 ASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV 603
            ++   G    +     V+V  ++ +P  +E++++  +   GPL+VG+NA  +  Y GGV
Sbjct: 240 GAQ---GTCRFDANKVAVRVTSFTAVPPDDEDQIRASLVRAGPLAVGLNAAFMQTYLGGV 296

Query: 604 IDLNQRLCNPKAQNHALIIVGYGEE---EKKDGTSIPYWIVKNSWGSDWGE 651
                 LC  K  NH +++VGYG       + G   PYWI+KNSWG +WGE
Sbjct: 297 S--CPLLCPRKLINHGVLLVGYGARGLAPLRLGYR-PYWIIKNSWGKEWGE 344



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 77/161 (47%), Gaps = 20/161 (12%)

Query: 41  PVTRFLNFMRDHDKVYSS-VEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSD 99
           P  +F  F+R H K YS   E+  RR   F  N+ +A  +Q  D G A   V  F DL+ 
Sbjct: 50  PEAKFAAFVRRHGKEYSGGAEEYARRLRVFAANLARAAAHQALDPG-ARHGVTPFSDLTP 108

Query: 100 SDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 158
            + Q +LTGL    T  ++      P ++  T  E+             LP +FDWRA+G
Sbjct: 109 EEFQARLTGLQQQGTNNNM------PAAARATAEEL-----------ATLPASFDWRAKG 151

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +++VK QG C  CWAFS  G VE  H +    L  LS Q 
Sbjct: 152 AVTEVKMQGMCGSCWAFSTTGAVEGAHFVATGKLLNLSEQQ 192


>gi|171702841|dbj|BAG16376.1| cysteine protease [Brassica rapa var. perviridis]
          Length = 333

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 148/291 (50%), Gaps = 35/291 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG-TAVFGVNKFFDLSESDLQQL-TGLN 257
           H +VY+   +   R+  F  NVE+ E      SG T    VN+F DL+  + + + TG  
Sbjct: 39  HGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFADLTNEEFRSMYTGFK 98

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            +S L               + T+  +F++ ++   D LP + DWR +G ++ +K+QG C
Sbjct: 99  GNSVLS--------------SRTKPTSFRYQNVS-SDALPVSVDWRKKGAVTPIKDQGLC 143

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
             CWAFSAV  +E +  I+   L  LS Q+LVDCD ++GGC GG MD A  Y I  GG+ 
Sbjct: 144 GSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTNDGGCMGGLMDTAFNYTITIGGLT 203

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN- 436
           S+  YPYK++     C   + +     +K +  +P  +E+ + K VA   P+S+G+    
Sbjct: 204 SESNYPYKSTNGT--CNFNKTKQIATSIKGFEDVPANDEKALMKAVAHH-PVSIGIAGGD 260

Query: 437 -GLFYYSGGVID----------LNQRLYGTS---IPYWIVKNSWGSDWGEK 473
            G  +YS GV            +    YG S   + YWI+KNSWG  WGE+
Sbjct: 261 IGFQFYSSGVFSGECTTHLDHGVTAVGYGRSKNGLKYWILKNSWGPKWGER 311



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD ++GGC GG MD A  Y I  GG+ S+  YPYK++     C   + 
Sbjct: 165 KLISLSEQELVDCDTNDGGCMGGLMDTAFNYTITIGGLTSESNYPYKSTNGT--CNFNKT 222

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNPK 614
           +     +K +  +P  +E+ + K VA   P+S+G+     G  +YS GV       C   
Sbjct: 223 KQIATSIKGFEDVPANDEKALMKAVAHH-PVSIGIAGGDIGFQFYSSGVFSGE---CTTH 278

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H +  VGYG    K+G  + YWI+KNSWG  WGE+
Sbjct: 279 L-DHGVTAVGYGRS--KNG--LKYWILKNSWGPKWGER 311



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 17/157 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSG-TAVFEVNKFFDLSDSDL 102
           R   +M +H +VY+   +   R+  F  NVE+ E      SG T    VN+F DL++ + 
Sbjct: 31  RHAEWMTEHGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFADLTNEEF 90

Query: 103 QQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
           + + TG   +S L               + T+  +F++ ++   D LP + DWR +G ++
Sbjct: 91  RSMYTGFKGNSVLS--------------SRTKPTSFRYQNVS-SDALPVSVDWRKKGAVT 135

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +K+QG C  CWAFSAV  +E +  I+   L  LS Q
Sbjct: 136 PIKDQGLCGSCWAFSAVAAIEGVAQIKKGKLISLSEQ 172


>gi|224076968|ref|XP_002305072.1| predicted protein [Populus trichocarpa]
 gi|222848036|gb|EEE85583.1| predicted protein [Populus trichocarpa]
          Length = 305

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 153/304 (50%), Gaps = 41/304 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H +VY  +++  +R+  F  N+E+ E + +        GVNKF DL+  + +     
Sbjct: 9   MAQHGRVYGDMKEKEKRYLIFKENIERIEAFNNGSDRGYKLGVNKFADLTNEEFR----- 63

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                      ++   +    +     +F++ +L    D+P + DWR +G ++ VK+QG 
Sbjct: 64  -----------AMYHGYKRQSSKLMSSSFRYENL---SDIPTSMDWRNDGAVTPVKDQGT 109

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C CCWAFS V  +E +  +Q  +L  LS QQLVDC   N GC GG MD A QYII NGG+
Sbjct: 110 CGCCWAFSTVAAIEGIIKLQTGNLISLSEQQLVDCTAGNKGCQGGLMDTAFQYIIRNGGL 169

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            S+  YPY+  +    C   +    + ++  Y  +P   E  + + VA + P+SV ++  
Sbjct: 170 TSEDNYPYQGVDGT--CSSEKAASTEAQITGYEDVPQNNENALLQAVAKQ-PVSVAVDGG 226

Query: 437 G--LFYYSGGVI------DLNQRL----YGT---SIPYWIVKNSWGSDWGE----KVEDK 477
           G    +Y  GV       +LN  +    YGT      YW+VKNSWG+ WGE    +++  
Sbjct: 227 GNDFRFYKSGVFEGDCGTNLNHGVTAIGYGTDSDGTDYWLVKNSWGTSWGESGYTRMQRG 286

Query: 478 VGSS 481
           +G+S
Sbjct: 287 IGAS 290



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 13/156 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDC   N GC GG MD A QYII NGG+ S+  YPY+  +    C   +  
Sbjct: 133 LISLSEQQLVDCTAGNKGCQGGLMDTAFQYIIRNGGLTSEDNYPYQGVDGT--CSSEKAA 190

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCNPKA 615
             + ++  Y  +P   E  + + VA + P+SV ++  G    +Y  GV + +   C    
Sbjct: 191 STEAQITGYEDVPQNNENALLQAVAKQ-PVSVAVDGGGNDFRFYKSGVFEGD---CGTNL 246

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NH +  +GYG +   DGT   YW+VKNSWG+ WGE
Sbjct: 247 -NHGVTAIGYGTD--SDGTD--YWLVKNSWGTSWGE 277



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 19/158 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           + R   +M  H +VY  +++  +R+  F  N+E+ E +           VNKF DL++ +
Sbjct: 2   LKRHEEWMAQHGRVYGDMKEKEKRYLIFKENIERIEAFNNGSDRGYKLGVNKFADLTNEE 61

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +                ++   +    +     +F++ +L    D+P + DWR +G ++
Sbjct: 62  FR----------------AMYHGYKRQSSKLMSSSFRYENL---SDIPTSMDWRNDGAVT 102

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            VK+QG C CCWAFS V  +E +  +Q  NL  LS Q 
Sbjct: 103 PVKDQGTCGCCWAFSTVAAIEGIIKLQTGNLISLSEQQ 140


>gi|400180463|gb|AFP73368.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 14/152 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLT 106
           +M  H +VY    +   R   F  N++  E   +  + +    +N+F D++  + L + T
Sbjct: 42  WMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFT 101

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           GLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK Q
Sbjct: 102 GLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVKHQ 148

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G+C CCWAFSAVG +E  + I   NL E S Q
Sbjct: 149 GRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQ 180


>gi|195054270|ref|XP_001994049.1| GH22731 [Drosophila grimshawi]
 gi|193895919|gb|EDV94785.1| GH22731 [Drosophila grimshawi]
          Length = 617

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 147/296 (49%), Gaps = 42/296 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y++  +   R   F  N+   E+  + + G+A +G+ +F D++ ++ +   GL   
Sbjct: 318 YKRQYANTAEHQMRLRIFRQNLRTIEELNANERGSAKYGITQFADMTSTEYKLHAGL--- 374

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                 Q S   P           A          ++P+ FDWR +  ++ VK QG+C  
Sbjct: 375 -----WQRSEDKPTGGAAAVVPPYA---------GEMPKEFDWRQKKAVTHVKNQGQCGS 420

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFS  G +E ++AI+   L E S Q+L+DCD ++  CNGG MD+A + I D GG+  +
Sbjct: 421 CWAFSVTGNIEGLYAIKTGELEEFSEQELLDCDSTDSACNGGLMDNAYKAIKDIGGLEYE 480

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
             YPY A + +  C         V++  +  +P G E  M++W+ + GP+S+G+NAN + 
Sbjct: 481 SEYPYAAKKMQ--CHFNRTMSH-VQLSGFVDLPKGNETAMQEWLLSNGPISIGLNANAMQ 537

Query: 440 YYSGGVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWGEK 473
           +Y GGV      L              YG S        +PYWIVKNSWG  WGE+
Sbjct: 538 FYRGGVSHPWAPLCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 593



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 4/164 (2%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  +   +L   + ++L+DCD ++  CNGG MD+A + I D GG+  +  YPY A + + 
Sbjct: 433 LYAIKTGELEEFSEQELLDCDSTDSACNGGLMDNAYKAIKDIGGLEYESEYPYAAKKMQ- 491

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C         V++  +  +P G E  M++W+ + GP+S+G+NAN + +Y GGV      
Sbjct: 492 -CHFNRTMSH-VQLSGFVDLPKGNETAMQEWLLSNGPISIGLNANAMQFYRGGVSHPWAP 549

Query: 610 LCNPKAQNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           LC+ K  +H ++IVGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 550 LCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 593



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 17/161 (10%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           LN     F  F   + + Y++  +   R   F  N+   E+    + G+A + + +F D+
Sbjct: 304 LNKIEHLFHKFQLKYKRQYANTAEHQMRLRIFRQNLRTIEELNANERGSAKYGITQFADM 363

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           + ++ +   GL         Q S   P           A          ++P+ FDWR +
Sbjct: 364 TSTEYKLHAGL--------WQRSEDKPTGGAAAVVPPYA---------GEMPKEFDWRQK 406

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             ++ VK QG+C  CWAFS  G +E ++AI+   L E S Q
Sbjct: 407 KAVTHVKNQGQCGSCWAFSVTGNIEGLYAIKTGELEEFSEQ 447


>gi|400180441|gb|AFP73357.1| cysteine protease [Solanum habrochaites]
          Length = 344

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 157/295 (53%), Gaps = 33/295 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDL-SESDLQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D+ SE  L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSEEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N +   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDISD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 NQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIRE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGEK 473
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGEK
Sbjct: 262 IAASQDLQFYAGGTYDGSCANRINHAVTAIGYGTDENGQKYWLLKNSWGTSWGEK 316



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 14/161 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIRENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +  NHA+  +GYG +E        YW++KNSWG+ WGEK
Sbjct: 281 ANRI-NHAVTAIGYGTDENGQ----KYWLLKNSWGTSWGEK 316



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  S   QTR      ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MSILITLFFVISMFNS---QTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSEEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N +   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDISD-DDMPSNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180455|gb|AFP73364.1| cysteine protease [Solanum peruvianum]
 gi|400180459|gb|AFP73366.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180385|gb|AFP73331.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|383863617|ref|XP_003707276.1| PREDICTED: uncharacterized protein LOC100880620 [Megachile
           rotundata]
          Length = 884

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 153/305 (50%), Gaps = 45/305 (14%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  V+ ++K Y S ++   R++ F  N++  E  +  + GTAV+GV  F DL+  + +
Sbjct: 578 LFEDFVKTYNKTYLSAKEKADRYKVFRKNLKMIEKLRKFEQGTAVYGVTMFADLTPEEFK 637

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL  +   E+  P  +A                       DLP  FDWR    ++ 
Sbjct: 638 TKYLGLKTNLNQENDIPLQEAVIPD------------------IDLPPKFDWREYNAVTP 679

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYI 370
           VK+QG+C  CWAFSA+G +E  +AI+   L  LS Q+LVDCD  + GC GG M +A + +
Sbjct: 680 VKDQGQCGSCWAFSAIGNIEGQYAIKHKKLLSLSEQELVDCDNLDDGCGGGYMINAYKTV 739

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
              GG+  +  YPY A   +   L  +    KV+V     I   +E++M +W+   GP+S
Sbjct: 740 EKLGGLELETDYPYDARNEKCHFLKNKA---KVQVASALNI-TNDEKKMAQWLVKNGPIS 795

Query: 431 VGMNANGLFYYSGGVIDLNQRL--------------YGTS--------IPYWIVKNSWGS 468
           VG+NAN + +Y GGV    + L              Y TS        +PYWI+KNSWG 
Sbjct: 796 VGINANAMQFYFGGVSHPFKFLCDPANLDHGVLIVGYATSTYPLFKKKLPYWIIKNSWGP 855

Query: 469 DWGEK 473
            WGE+
Sbjct: 856 KWGEQ 860



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 91/160 (56%), Gaps = 11/160 (6%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GC GG M +A + +   GG+  +  YPY A   +   L  + 
Sbjct: 708 KLLSLSEQELVDCDNLDDGCGGGYMINAYKTVEKLGGLELETDYPYDARNEKCHFLKNKA 767

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
              KV+V     I   +E++M +W+   GP+SVG+NAN + +Y GGV    + LC+P   
Sbjct: 768 ---KVQVASALNI-TNDEKKMAQWLVKNGPISVGINANAMQFYFGGVSHPFKFLCDPANL 823

Query: 617 NHALIIVGYGEEE----KKDGTSIPYWIVKNSWGSDWGEK 652
           +H ++IVGY        KK    +PYWI+KNSWG  WGE+
Sbjct: 824 DHGVLIVGYATSTYPLFKK---KLPYWIIKNSWGPKWGEQ 860



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 19/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           F +F++ ++K Y S ++   R++ F  N++  E  ++ + GTAV+ V  F DL+  + + 
Sbjct: 579 FEDFVKTYNKTYLSAKEKADRYKVFRKNLKMIEKLRKFEQGTAVYGVTMFADLTPEEFKT 638

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +  GL  +   E+  P  +A                       DLP  FDWR    ++ V
Sbjct: 639 KYLGLKTNLNQENDIPLQEAVIPD------------------IDLPPKFDWREYNAVTPV 680

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFSA+G +E  +AI+   L  LS Q
Sbjct: 681 KDQGQCGSCWAFSAIGNIEGQYAIKHKKLLSLSEQ 715


>gi|400180447|gb|AFP73360.1| cysteine protease [Solanum chilense]
          Length = 345

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 157/294 (53%), Gaps = 32/294 (10%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS    TE +  + N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSS----TEFK--KINDLSD-DDMPSNLDWRESGAVTQVK 147

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I    L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 148 HQGQCGCCWAFSAVGSLEGAYKIATGKLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 207

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 208 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 262

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 263 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 316



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +   KL   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     E+   
Sbjct: 170 IATGKLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---EQYTC 226

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 227 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 281

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 282 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 316



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 19/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS  
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSS-- 117

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
             TE +  + N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 118 --TEFK--KINDLSD-DDMPSNLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIAT 172

Query: 190 NNLTELSVQ 198
             L E S Q
Sbjct: 173 GKLMEFSEQ 181


>gi|400180403|gb|AFP73340.1| cysteine protease [Solanum peruvianum]
 gi|400180413|gb|AFP73345.1| cysteine protease [Solanum peruvianum]
 gi|400180415|gb|AFP73346.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180467|gb|AFP73370.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 14/152 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLT 106
           +M  H +VY    +   R   F  N++  E   +  + +    +N+F D++  + L + T
Sbjct: 42  WMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFT 101

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           GLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK Q
Sbjct: 102 GLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVKHQ 148

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G+C CCWAFSAVG +E  + I   NL E S Q
Sbjct: 149 GRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQ 180


>gi|147790682|emb|CAN61026.1| hypothetical protein VITISV_001146 [Vitis vinifera]
          Length = 469

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 166/323 (51%), Gaps = 38/323 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           E  +  H K Y+++ +  RR + F  N+   +++ +E+  T   G+N+F DL+  + + +
Sbjct: 54  EAWLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAENR-TYKVGLNRFADLTNEEYRSM 112

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                      +     A   S+   ++  AF     R GD LPE+ DWR +G + +VK+
Sbjct: 113 Y----------LGTRTAAKRRSSNKISDRYAF-----RVGDSLPESVDWRKKGAVVEVKD 157

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIID 372
           QG C  CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+
Sbjct: 158 QGSCGSCWAFSTIAAVEGINKIVTGGLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIN 217

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S++ YPYKAS+    C    +    V +  Y  +P  +E+ ++K VA + P+SV 
Sbjct: 218 NGGIDSEEDYPYKASDGR--CDQYRKNAXVVTIDGYEDVPENDEKSLEKAVANQ-PVSVA 274

Query: 433 MNANGLFY--YSGGVID----------LNQRLYGT--SIPYWIVKNSWGSDWGE----KV 474
           + A G  +  Y  G+            +    YGT   + YWIVKNSWG+ WGE    ++
Sbjct: 275 IEAGGREFQLYQSGIFTGRCGTALDHGVTAVGYGTENGVDYWIVKNSWGASWGEEGYIRM 334

Query: 475 EDKVGSSGNRTRDLELTGVLPSK 497
           E  + +S      + +    P K
Sbjct: 335 ERDLATSATGKCGIAMEASYPIK 357



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPYKAS+  
Sbjct: 176 INKIVTGGLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYKASDGR 235

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P  +E+ ++K VA + P+SV + A G  +  Y  G+   
Sbjct: 236 --CDQYRKNAXVVTIDGYEDVPENDEKSLEKAVANQ-PVSVAIEAGGREFQLYQSGIF-- 290

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C   A +H +  VGYG E   D     YWIVKNSWG+ WGE+
Sbjct: 291 -TGRCGT-ALDHGVTAVGYGTENGVD-----YWIVKNSWGASWGEE 329



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 33/223 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K Y+++ +  RR + F  N+   +++  E+  T    +N+F DL++ + + +  
Sbjct: 56  WLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAENR-TYKVGLNRFADLTNEEYRSMY- 113

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                    +     A   S+   ++  AF     R GD LPE+ DWR +G + +VK+QG
Sbjct: 114 ---------LGTRTAAKRRSSNKISDRYAF-----RVGDSLPESVDWRKKGAVVEVKDQG 159

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED-----LLRRHENFVTN-- 220
            C  CWAFS +  VE ++ I    L  LS Q      +S  +     L+     F+ N  
Sbjct: 160 SCGSCWAFSTIAAVEGINKIVTGGLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNG 219

Query: 221 -VEKAEDYQSEDS---------GTAVFGVNKFFDLSESDLQQL 253
            ++  EDY  + S            V  ++ + D+ E+D + L
Sbjct: 220 GIDSEEDYPYKASDGRCDQYRKNAXVVTIDGYEDVPENDEKSL 262


>gi|400180465|gb|AFP73369.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEVAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEVAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180351|gb|AFP73314.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180347|gb|AFP73312.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GC+GG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GC+GG M +A  +II+NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIIENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180345|gb|AFP73311.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GC+GG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDENGQKYWLLKNSWGTSWGE 315



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GC+GG M +A  +II+NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIIENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +E        YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDENGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|168063167|ref|XP_001783545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664932|gb|EDQ51634.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 149/292 (51%), Gaps = 40/292 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
              H K Y   E  L R   +  N+  A    SE + T   G+ KF DL+  + +++   
Sbjct: 58  AHKHGKAYHDAEQCLHRFAVWKDNL--AYIRHSETNRTYSLGLTKFADLTNEEFRRM--- 112

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD-DLPEAFDWRAEGVISKVKEQG 315
                           ++  + D   RA +    R+ D + PE+ DWR  G ++ VK+QG
Sbjct: 113 ----------------YTGTRIDRSRRAKRRTGFRYADSEAPESVDWRKNGAVTSVKDQG 156

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNG 374
            C  CWAFSAVG VE ++AI+      LS Q+LVDCD+  N GCNGG MD A  +II NG
Sbjct: 157 SCGSCWAFSAVGSVEGINAIRNGEAVSLSEQELVDCDLEYNQGCNGGLMDYAFDFIIQNG 216

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ +++ YPYK  +    C   ++    V +  Y  +P  +EE +KK VA + P+SV + 
Sbjct: 217 GIDTEKDYPYKGFDGR--CDNSKKNAHVVTIDGYEDVPENDEEALKKAVAGQ-PVSVAIE 273

Query: 435 ANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           A G  +  Y+ GV       DL+  +    YGT   + YWIVKNSWG  WGE
Sbjct: 274 AGGRDFQLYAQGVFSGECGTDLDHGVLAVGYGTEDGVDYWIVKNSWGEYWGE 325



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 88/158 (55%), Gaps = 15/158 (9%)

Query: 501 LATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 559
           L+ ++LVDCD+  N GCNGG MD A  +II NGG+ +++ YPYK  +    C   ++   
Sbjct: 184 LSEQELVDCDLEYNQGCNGGLMDYAFDFIIQNGGIDTEKDYPYKGFDGR--CDNSKKNAH 241

Query: 560 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPKAQN 617
            V +  Y  +P  +EE +KK VA + P+SV + A G  +  Y+ GV       C     +
Sbjct: 242 VVTIDGYEDVPENDEEALKKAVAGQ-PVSVAIEAGGRDFQLYAQGVFSGE---CGTDL-D 296

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           H ++ VGYG E+  D     YWIVKNSWG  WGE   L
Sbjct: 297 HGVLAVGYGTEDGVD-----YWIVKNSWGEYWGESGYL 329



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 22/161 (13%)

Query: 39  NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLS 98
           N  + +F  +   H K Y   E  L R   +  N+  A     E + T    + KF DL+
Sbjct: 48  NLLLEQFAAWAHKHGKAYHDAEQCLHRFAVWKDNL--AYIRHSETNRTYSLGLTKFADLT 105

Query: 99  DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD-DLPEAFDWRAE 157
           + + +++                   ++  + D   RA +    R+ D + PE+ DWR  
Sbjct: 106 NEEFRRM-------------------YTGTRIDRSRRAKRRTGFRYADSEAPESVDWRKN 146

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G ++ VK+QG C  CWAFSAVG VE ++AI+      LS Q
Sbjct: 147 GAVTSVKDQGSCGSCWAFSAVGSVEGINAIRNGEAVSLSEQ 187


>gi|535473|emb|CAA53377.1| cysteine protease [Vicia sativa]
          Length = 368

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 32/288 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H KVY+ + +  +R + F  N+   +++ +++  T + G+NKF D++  + + +      
Sbjct: 46  HQKVYNGLREKDQRFQIFKDNLNFIDEHNAQNY-TYIVGLNKFADMTNEEYRDM----YL 100

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
            T  DI+  +       +       + +NS   GD LP   DWR +G I+ +K+QG C  
Sbjct: 101 GTRSDIKRRIM------KNKITGHRYAYNS---GDRLPVHVDWRLKGAITHIKDQGSCGS 151

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS +  VEA++ I    L  LS Q+LVDCD + N GCNGG MD A ++II NGG+ +
Sbjct: 152 CWAFSTIATVEAINKIVTGKLVSLSEQELVDCDRAFNEGCNGGLMDYAFEFIIGNGGIDT 211

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG- 437
           DQ YPYK  E    C    ++   V +  Y  +P   E  +KK VA + P+SV + A+G 
Sbjct: 212 DQHYPYKGFEGR--CDPTRKKAKIVSIDGYEDVPSNNENALKKAVAHQ-PVSVAIEASGR 268

Query: 438 -LFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            L  Y  GV        L+  +    YG+   + YW+V+NSWG++WGE
Sbjct: 269 ALQLYQSGVFTGKCGTSLDHAVVIVGYGSENGLDYWLVRNSWGTNWGE 316



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 95/165 (57%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  KL  L+ ++LVDCD + N GCNGG MD A ++II NGG+ +DQ YPYK  E  
Sbjct: 164 INKIVTGKLVSLSEQELVDCDRAFNEGCNGGLMDYAFEFIIGNGGIDTDQHYPYKGFEGR 223

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C    ++   V +  Y  +P   E  +KK VA + P+SV + A+G  L  Y  GV   
Sbjct: 224 --CDPTRKKAKIVSIDGYEDVPSNNENALKKAVAHQ-PVSVAIEASGRALQLYQSGVFTG 280

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   + +HA++IVGYG E   D     YW+V+NSWG++WGE
Sbjct: 281 K---CGT-SLDHAVVIVGYGSENGLD-----YWLVRNSWGTNWGE 316



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 14/157 (8%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +T +  ++  H KVY+ + +  +R + F  N+   +++  ++  T +  +NKF D+++ +
Sbjct: 36  MTMYEEWLVKHQKVYNGLREKDQRFQIFKDNLNFIDEHNAQNY-TYIVGLNKFADMTNEE 94

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            + +       T  DI+  +       +       + +NS   GD LP   DWR +G I+
Sbjct: 95  YRDM----YLGTRSDIKRRIM------KNKITGHRYAYNS---GDRLPVHVDWRLKGAIT 141

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +K+QG C  CWAFS +  VEA++ I    L  LS Q
Sbjct: 142 HIKDQGSCGSCWAFSTIATVEAINKIVTGKLVSLSEQ 178


>gi|168058022|ref|XP_001781010.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667567|gb|EDQ54194.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 457

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 156/292 (53%), Gaps = 35/292 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTG 255
              H KVYS+ E+   R   +  N+E  + + SE + +   G+ KF DL+  + + Q TG
Sbjct: 49  AHKHGKVYSAAEERAHRFLVWKDNLEYIQRH-SEKNLSYWLGLTKFADLTNEEFRRQYTG 107

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
             +D +   ++    A  S    ++E               P++ DWR +G ++ VK+QG
Sbjct: 108 TRIDRSRR-LKKGRNATGSFRYANSEA--------------PKSIDWREKGAVTSVKDQG 152

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNG 374
            C  CWAFSAVG VE ++AI+      LSVQ+LVDCD   N GCNGG MD A  ++I NG
Sbjct: 153 SCGSCWAFSAVGSVEGINAIRTGDAISLSVQELVDCDKKYNQGCNGGLMDYAFDFVIQNG 212

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ +++ YPY+  +    C V +     V +  Y  +P  +EE +KK VA + P+SV + 
Sbjct: 213 GIDTEKDYPYQGYDGR--CDVNKMNARVVTIDSYEDVPENDEEALKKAVAGQ-PVSVAIE 269

Query: 435 ANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           A G  +  YSGGV       DL+  +    YG+   + YWIVKNSWG  WGE
Sbjct: 270 AGGRDFQLYSGGVFTGRCGTDLDHGVLAVGYGSEKGLDYWIVKNSWGEYWGE 321



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 121/252 (48%), Gaps = 37/252 (14%)

Query: 416 EEEMKKWVATR----GPLSVGMNANGLFYYSGG----VIDLNQRLYGTSIPYWIVKNSWG 467
           EE  +++  TR      L  G NA G F Y+       ID  ++   TS+     + S G
Sbjct: 99  EEFRRQYTGTRIDRSRRLKKGRNATGSFRYANSEAPKSIDWREKGAVTSVK---DQGSCG 155

Query: 468 SDWGEKVEDKV-GSSGNRTRDLELTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDAL 525
           S W       V G +  RT D             L+ ++LVDCD   N GCNGG MD A 
Sbjct: 156 SCWAFSAVGSVEGINAIRTGDA----------ISLSVQELVDCDKKYNQGCNGGLMDYAF 205

Query: 526 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 585
            ++I NGG+ +++ YPY+  +    C V +     V +  Y  +P  +EE +KK VA + 
Sbjct: 206 DFVIQNGGIDTEKDYPYQGYDGR--CDVNKMNARVVTIDSYEDVPENDEEALKKAVAGQ- 262

Query: 586 PLSVGMNANGLFY--YSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKN 643
           P+SV + A G  +  YSGGV       C     +H ++ VGYG E+  D     YWIVKN
Sbjct: 263 PVSVAIEAGGRDFQLYSGGVF---TGRCGTDL-DHGVLAVGYGSEKGLD-----YWIVKN 313

Query: 644 SWGSDWGEKVML 655
           SWG  WGE   L
Sbjct: 314 SWGEYWGESGYL 325



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 17/156 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  +   H KVYS+ E+   R   +  N+E  + +  E + +    + KF DL++ + +
Sbjct: 44  QFAAWAHKHGKVYSAAEERAHRFLVWKDNLEYIQRHS-EKNLSYWLGLTKFADLTNEEFR 102

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q TG  +D +   ++    A  S    ++E               P++ DWR +G ++ 
Sbjct: 103 RQYTGTRIDRSRR-LKKGRNATGSFRYANSEA--------------PKSIDWREKGAVTS 147

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG C  CWAFSAVG VE ++AI+  +   LSVQ
Sbjct: 148 VKDQGSCGSCWAFSAVGSVEGINAIRTGDAISLSVQ 183


>gi|356553978|ref|XP_003545327.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 496

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 152/295 (51%), Gaps = 47/295 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H KVY+++ +  +R + F  N+   +D+ S++  T   G+N+F DL+  + +        
Sbjct: 86  HGKVYNALGEKEKRFQIFKDNLRFIDDHNSQEDRTYKLGLNRFADLTNEEYR-------- 137

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH----GDDLPEAFDWRAEGVISKVKEQG 315
                      A +   + D   R  +  S R+    GD LPE+ DWR EG +  VK+QG
Sbjct: 138 -----------AKYLGTKIDPNRRLGKTPSNRYAPRVGDKLPESVDWRKEGAVPPVKDQG 186

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNG 374
            C  CWAFSA+G VE ++ I    L  LS Q+LVDCD   N GCNGG MD A ++II+NG
Sbjct: 187 GCGSCWAFSAIGAVEGINKIVTGELISLSEQELVDCDTGYNEGCNGGLMDYAFEFIINNG 246

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ S++ YPY+  +    C    +    V + +Y  +P  +E  +KK VA + P+SV + 
Sbjct: 247 GIDSEEDYPYRGVDGR--CDTYRKNAKVVSIDDYEDVPAYDELALKKAVANQ-PVSVAIE 303

Query: 435 ANGL---FYYSG------------GVIDLNQRLYGTS--IPYWIVKNSWGSDWGE 472
             G     Y SG            GV+ +    YGT+    YWIV+NSWG  WGE
Sbjct: 304 GGGREFQLYVSGVFTGRCGTALDHGVVAVG---YGTANGHDYWIVRNSWGPSWGE 355



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  +L  L+ ++LVDCD   N GCNGG MD A ++II+NGG+ S++ YPY+  +  
Sbjct: 203 INKIVTGELISLSEQELVDCDTGYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYRGVDGR 262

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V + +Y  +P  +E  +KK VA + P+SV +   G  +  Y  GV   
Sbjct: 263 --CDTYRKNAKVVSIDDYEDVPAYDELALKKAVANQ-PVSVAIEGGGREFQLYVSGVF-- 317

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   A +H ++ VGYG     D     YWIV+NSWG  WGE
Sbjct: 318 -TGRCG-TALDHGVVAVGYGTANGHD-----YWIVRNSWGPSWGE 355



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 23/161 (14%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           ++ +  ++  H KVY+++ +  +R + F  N+   +D+  ++  T    +N+F DL++ +
Sbjct: 76  MSMYEQWLVKHGKVYNALGEKEKRFQIFKDNLRFIDDHNSQEDRTYKLGLNRFADLTNEE 135

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH----GDDLPEAFDWRAE 157
            +                   A +   + D   R  +  S R+    GD LPE+ DWR E
Sbjct: 136 YR-------------------AKYLGTKIDPNRRLGKTPSNRYAPRVGDKLPESVDWRKE 176

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G +  VK+QG C  CWAFSA+G VE ++ I    L  LS Q
Sbjct: 177 GAVPPVKDQGGCGSCWAFSAIGAVEGINKIVTGELISLSEQ 217


>gi|332326589|gb|AEE42618.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 174/344 (50%), Gaps = 54/344 (15%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL--QQLTGLNLD 259
           +VY +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++   + L G    
Sbjct: 47  RVYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARYLNG---- 101

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQGKC 317
                      A F++     +  A Q +     D   +P+A DWR +G ++ VK+QG C
Sbjct: 102 ----------AAYFAA----AKQHAGQHHRKARADLSAVPDAVDWREKGAVTPVKDQGAC 147

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGG 375
             CWAFSAVG +E+  A+ G+ LT LS QQLV CD  + GCNGG M  A ++++   NG 
Sbjct: 148 GSCWAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCNGGLMTQAFEWLLRNMNGT 207

Query: 376 VVSDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           ++++ +YPY +S  +   C    +     ++  Y  I    E  M  W+A  GP+S+ ++
Sbjct: 208 MLTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIE-SSETVMAAWLAKSGPISIAVD 266

Query: 435 ANGLFYYSGGVID------LNQ--RLYGTS----IPYWIVKNSWGSDWGEK--VEDKVGS 480
           A+    Y  GV+       LN    L G +    +PYW++KNSWG DWGEK  V   +G 
Sbjct: 267 ASSFMSYESGVLTSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 481 SGNRTRDLELTGVLPSKLS-------------RLATEKLVDCDM 511
           +     +  ++  +P  L+             R+  E+++  DM
Sbjct: 327 NACLLTEYPVSAHVPQSLAPGPSTESEERAPKRVMVEQVICTDM 370



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 87/159 (54%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L+ L+ ++LV CD  + GCNGG M  A ++++ N  G ++++ +YPY +S  +   C  
Sbjct: 169 RLTALSEQQLVSCDDKDSGCNGGLMTQAFEWLLRNMNGTMLTEDSYPYVSSTGDVPECTN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             +     ++  Y  I    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSQLVPGARIDGYVTIE-SSETVMAAWLAKSGPISIAVDASSFMSYESGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            A NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 DALNHGVLLVGYNRTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 24/168 (14%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + +VY +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDL--QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEA 151
           DLS+++   + L G               A F++     +  A Q +     D   +P+A
Sbjct: 88  DLSEAEFAARYLNG--------------AAYFAA----AKQHAGQHHRKARADLSAVPDA 129

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            DWR +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ LT LS Q 
Sbjct: 130 VDWREKGAVTPVKDQGACGSCWAFSAVGNIESQWAVAGHRLTALSEQQ 177


>gi|162463464|ref|NP_001104879.1| cysteine proteinase Mir3 precursor [Zea mays]
 gi|2425066|gb|AAB88263.1| cysteine proteinase Mir3 [Zea mays]
          Length = 480

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/291 (35%), Positives = 159/291 (54%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H + Y++V    RR++ F  N+   + + +  D+G   F  G+N+F DL           
Sbjct: 51  HGRTYNAVGAEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADL----------- 99

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T ++   +     +  Q D ++ A ++++  + +DLPE+ DWRA+G +++VK+QG 
Sbjct: 100 ----TNDEYPATYLGARTRPQRDRKLGA-RYHAADN-EDLPESVDWRAKGAVAEVKDQGS 153

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+NGG
Sbjct: 154 CGTCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGG 213

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + +++ YPYK ++    C V  +    V +  Y  +P  +E+ ++K VA + P+SV + A
Sbjct: 214 IDTEKDYPYKGTDGR--CDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQ-PVSVAIEA 270

Query: 436 NGLFY--YSGGVI--DLNQRL--------YGT--SIPYWIVKNSWGSDWGE 472
            G  +  YS G+       RL        YGT     YWIVKNSWGS WGE
Sbjct: 271 AGTAFQLYSSGIFTGSCGTRLDHGVTAVGYGTENGKDYWIVKNSWGSSWGE 321



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 19/164 (11%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +++ YPYK ++    C
Sbjct: 172 IVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEKDYPYKGTDGR--C 229

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVI--DLN 607
            V  +    V +  Y  +P  +E+ ++K VA + P+SV + A G  +  YS G+      
Sbjct: 230 DVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQ-PVSVAIEAAGTAFQLYSSGIFTGSCG 288

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            RL      +H +  VGYG E  KD     YWIVKNSWGS WGE
Sbjct: 289 TRL------DHGVTAVGYGTENGKD-----YWIVKNSWGSSWGE 321



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 20/157 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +M  H + Y++V    RR++ F  N+   + +    D+G   F +  N+F DL++  
Sbjct: 44  YAEWMAAHGRTYNAVGAEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLTN-- 101

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                        ++   +     +  Q D ++ A ++++  + +DLPE+ DWRA+G ++
Sbjct: 102 -------------DEYPATYLGARTRPQRDRKLGA-RYHAADN-EDLPESVDWRAKGAVA 146

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +VK+QG C  CWAFS +  VE ++ I   +L  LS Q
Sbjct: 147 EVKDQGSCGTCWAFSTIAAVEGINQIVTGDLISLSEQ 183


>gi|414590229|tpg|DAA40800.1| TPA: putative cysteine protease family protein [Zea mays]
          Length = 381

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 152/308 (49%), Gaps = 48/308 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTG 255
           V+ H + YS  ++  RR   F  N+ +A  +Q+ D  TA  GV  F DL+  + + +LTG
Sbjct: 64  VRRHGRRYSGPKEYARRLRVFAANLARAAAHQALDP-TARHGVTPFSDLTREEFEARLTG 122

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L     ++ +   + A   +++ +                LP +FDWR +G ++ VK QG
Sbjct: 123 LRAGGDVQRLMSGVPAAPPASKEEVA-------------RLPASFDWRDKGAVTGVKTQG 169

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMDDA 366
            C  CWAFS  G VE  + +    L +LS QQLVDCD +         N GC GG M +A
Sbjct: 170 ACGSCWAFSTTGAVEGANFLATGELVDLSEQQLVDCDHTCSAVAQNECNNGCAGGLMTNA 229

Query: 367 LQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATR 426
             Y++++GG++   AYPY  +     C     +   V+V  ++ +P G+E +++  +  R
Sbjct: 230 YSYLMESGGLMEQSAYPYTGAAGP--CRFDPTQ-VAVRVANFTAVPAGDEAQIRAALVRR 286

Query: 427 GPLSVGMNANGLFYYSGGV----------IDLNQRLYGTSI-----------PYWIVKNS 465
           GPL+VG+NA  +  Y GGV          ++    L G              PYWI+KNS
Sbjct: 287 GPLAVGLNAAFMQTYVGGVSCPLICPRAWVNHGVLLVGYGARGFAALRLGYRPYWIIKNS 346

Query: 466 WGSDWGEK 473
           WG  WGE+
Sbjct: 347 WGKQWGEQ 354



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 20/169 (11%)

Query: 497 KLSRLATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD +         N GC GG M +A  Y++++GG++   AYPY  +  
Sbjct: 193 ELVDLSEQQLVDCDHTCSAVAQNECNNGCAGGLMTNAYSYLMESGGLMEQSAYPYTGAAG 252

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
              C     +   V+V  ++ +P G+E +++  +  RGPL+VG+NA  +  Y GGV   +
Sbjct: 253 P--CRFDPTQ-VAVRVANFTAVPAGDEAQIRAALVRRGPLAVGLNAAFMQTYVGGV---S 306

Query: 608 QRLCNPKA-QNHALIIVGYGEE---EKKDGTSIPYWIVKNSWGSDWGEK 652
             L  P+A  NH +++VGYG       + G   PYWI+KNSWG  WGE+
Sbjct: 307 CPLICPRAWVNHGVLLVGYGARGFAALRLGYR-PYWIIKNSWGKQWGEQ 354



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 15/160 (9%)

Query: 41  PVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDS 100
           P  +F  F+R H + YS  ++  RR   F  N+ +A  +Q  D  TA   V  F DL+  
Sbjct: 56  PEAQFAAFVRRHGRRYSGPKEYARRLRVFAANLARAAAHQALDP-TARHGVTPFSDLTRE 114

Query: 101 DLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
           + + +LTGL     ++ +   + A   +++ +                LP +FDWR +G 
Sbjct: 115 EFEARLTGLRAGGDVQRLMSGVPAAPPASKEEVA-------------RLPASFDWRDKGA 161

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++ VK QG C  CWAFS  G VE  + +    L +LS Q 
Sbjct: 162 VTGVKTQGACGSCWAFSTTGAVEGANFLATGELVDLSEQQ 201


>gi|413944253|gb|AFW76902.1| hypothetical protein ZEAMMB73_056195 [Zea mays]
          Length = 340

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 46/311 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + +VY    +  RR E F  NV+  E + +  +     G+N+F DL+  + +     
Sbjct: 41  MAQYSRVYKDAAEKARRFEVFKANVKFIESFNTGGNRKFWLGINQFADLTNDEFRTT--- 97

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T +  +PSL         D     F++ ++   D +P   DWR  G ++ +K+QG+
Sbjct: 98  ---KTNKGFKPSL---------DKVSTGFRYENVSV-DAIPATIDWRTNGAVTPIKDQGQ 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV   E +  I    L  LS Q+LVDCD+   + GC GG MDDA ++II NG
Sbjct: 145 CGCCWAFSAVAATEGIVKISTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNG 204

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPY A++ +  C  G        +K Y  +P  +E  + K VA + P+SV ++
Sbjct: 205 GLTTESNYPYTAADGK--CKSGSNSA--ANIKGYEDVPTNDEAALMKAVANQ-PVSVAVD 259

Query: 435 ANGLF--YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK------ 473
              +   +YSGGV+      DL+  +    YG +     YW++KNSWG+ WGE       
Sbjct: 260 GGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWGENGYLRME 319

Query: 474 --VEDKVGSSG 482
             + DK G  G
Sbjct: 320 KDISDKKGMCG 330



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 95/170 (55%), Gaps = 17/170 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  +   KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+ ++  YPY A++ 
Sbjct: 160 IVKISTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYTAADG 219

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVID 605
           +  C  G        +K Y  +P  +E  + K VA + P+SV ++   +   +YSGGV+ 
Sbjct: 220 K--CKSGSNSA--ANIKGYEDVPTNDEAALMKAVANQ-PVSVAVDGGDMTFQFYSGGVMT 274

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
            +   C     +H +  +GYG+    DGT   YW++KNSWG+ WGE   L
Sbjct: 275 GS---CGTDL-DHGIAAIGYGKTS--DGTK--YWLMKNSWGTTWGENGYL 316



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 16/158 (10%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V R   +M  + +VY    +  RR E F  NV+  E +    +      +N+F DL++ +
Sbjct: 34  VARHEQWMAQYSRVYKDAAEKARRFEVFKANVKFIESFNTGGNRKFWLGINQFADLTNDE 93

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +         T +  +PSL         D     F++ ++   D +P   DWR  G ++
Sbjct: 94  FRTT------KTNKGFKPSL---------DKVSTGFRYENVSV-DAIPATIDWRTNGAVT 137

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +K+QG+C CCWAFSAV   E +  I    L  LS Q 
Sbjct: 138 PIKDQGQCGCCWAFSAVAATEGIVKISTGKLISLSEQE 175


>gi|400180349|gb|AFP73313.1| cysteine protease [Solanum peruvianum]
 gi|400180469|gb|AFP73371.1| cysteine protease [Solanum peruvianum]
 gi|400180471|gb|AFP73372.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 158/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    + + R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKVERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS    TE++    N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSS----TELK---INDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    + + R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKVERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS  
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSS-- 117

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
             TE++    N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 118 --TELK---INDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|320169652|gb|EFW46551.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 325

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 160/322 (49%), Gaps = 47/322 (14%)

Query: 174 AFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG 233
           AF+AV ++  +         E    H ++ Y+S ++   R E +++N+E   ++ +    
Sbjct: 3   AFTAVALLALVACATAMPFAEWKALH-NRQYASAQEEALRQEIYLSNLELINEHNAAGRH 61

Query: 234 TAVFGVNKFFDLSESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH 292
           +   G+N+F DL+  +   +  G+  +        +    F+S+     M +        
Sbjct: 62  SYTLGMNEFGDLAHHEFAAKYLGVRFNGV------NATKSFASSTYLPRMVS-------- 107

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
              LP++ DWR  G+++ VK QG+C  CW+FS  G VE  HA +  +L  LS Q LVDC 
Sbjct: 108 ---LPDSVDWRTAGIVTPVKNQGQCGSCWSFSTTGSVEGQHARKTGTLVSLSEQNLVDCS 164

Query: 353 MSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 410
              G  GCNGG MDDA +YII NGG+ ++ +YPY A+    G            V  Y  
Sbjct: 165 SQEGNEGCNGGLMDDAFEYIIKNGGIDTEASYPYTAT---TGTCKFNAANIGATVASYQD 221

Query: 411 IPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSG--------------GVIDLNQRLY 453
           I  G E +++  VAT GP+SV ++A+ +   FY++G              GV+ +    Y
Sbjct: 222 IITGSESDLQNAVATVGPVSVAIDASHINFQFYFTGVYNEKKCSTTQLDHGVLAVG---Y 278

Query: 454 GTSIP---YWIVKNSWGSDWGE 472
           GTS     YW+VKNSWG+ WG+
Sbjct: 279 GTSTEGKDYWLVKNSWGATWGK 300



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 90/160 (56%), Gaps = 17/160 (10%)

Query: 498 LSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ + LVDC    G  GCNGG MDDA +YII NGG+ ++ +YPY A+    G     
Sbjct: 152 LVSLSEQNLVDCSSQEGNEGCNGGLMDDAFEYIIKNGGIDTEASYPYTAT---TGTCKFN 208

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLNQRLCN 612
                  V  Y  I  G E +++  VAT GP+SV ++A+ +   FY++G     N++ C+
Sbjct: 209 AANIGATVASYQDIITGSESDLQNAVATVGPVSVAIDASHINFQFYFTG---VYNEKKCS 265

Query: 613 PKAQNHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGE 651
               +H ++ VGYG   E KD     YW+VKNSWG+ WG+
Sbjct: 266 TTQLDHGVLAVGYGTSTEGKD-----YWLVKNSWGATWGK 300



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 18/156 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           F  +   H++ Y+S ++   R E +++N+E   ++      +    +N+F DL+  +   
Sbjct: 21  FAEWKALHNRQYASAQEEALRQEIYLSNLELINEHNAAGRHSYTLGMNEFGDLAHHEFAA 80

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +  G+  +        +    F+S+     M +           LP++ DWR  G+++ V
Sbjct: 81  KYLGVRFNGV------NATKSFASSTYLPRMVS-----------LPDSVDWRTAGIVTPV 123

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG+C  CW+FS  G VE  HA +   L  LS Q+
Sbjct: 124 KNQGQCGSCWSFSTTGSVEGQHARKTGTLVSLSEQN 159


>gi|307200028|gb|EFN80374.1| Putative cysteine proteinase CG12163 [Harpegnathos saltator]
          Length = 1032

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/310 (35%), Positives = 154/310 (49%), Gaps = 45/310 (14%)

Query: 187  IQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
            ++   L E  V  +++ Y++ E+   R   F  N+      +  + GT  +GVN+F D+S
Sbjct: 721  MRSERLFENFVNTYNRTYATEEERNLRLSIFRENLGIIRLLRKNEQGTGQYGVNQFADVS 780

Query: 247  ESDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
              +      GL  D   E+  P  QA       D E              LP +FDWR +
Sbjct: 781  TEEFHAFYLGLRPDLRTENNIPLRQAEIP----DIE--------------LPNSFDWRQK 822

Query: 306  GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDD 365
            G ++ VK QG C  CWAFS  G VE  +AI+ N L  LS Q+LVDCD  + GCNGG  D+
Sbjct: 823  GAVTPVKNQGMCGSCWAFSVTGNVEGQYAIKHNKLLSLSEQELVDCDDLDEGCNGGLPDN 882

Query: 366  ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
            A + I   GG+  +  YPY+A E+ER     ++   KV+V     I    E ++ +W+  
Sbjct: 883  AYRAIEKLGGLELESDYPYEA-ENERCHF--KKNMAKVQVGSAVNI-TSNETQIAQWLVA 938

Query: 426  RGPLSVGMNANGLFYYSGGVIDLNQRL--------------YGTS--------IPYWIVK 463
             GP+S+G+NAN + +Y GGV    + L              YGTS        +PYWIVK
Sbjct: 939  NGPISIGINANAMQFYMGGVSHPFKFLCNPKNLDHGVLIVGYGTSNYPLFHKKLPYWIVK 998

Query: 464  NSWGSDWGEK 473
            NSWG  WGE+
Sbjct: 999  NSWGDRWGEQ 1008



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 496  SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
            +KL  L+ ++LVDCD  + GCNGG  D+A + I   GG+  +  YPY+A E+ER     +
Sbjct: 855  NKLLSLSEQELVDCDDLDEGCNGGLPDNAYRAIEKLGGLELESDYPYEA-ENERCHF--K 911

Query: 556  EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            +   KV+V     I    E ++ +W+   GP+S+G+NAN + +Y GGV    + LCNPK 
Sbjct: 912  KNMAKVQVGSAVNI-TSNETQIAQWLVANGPISIGINANAMQFYMGGVSHPFKFLCNPKN 970

Query: 616  QNHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
             +H ++IVGYG          +PYWIVKNSWG  WGE+
Sbjct: 971  LDHGVLIVGYGTSNYPLFHKKLPYWIVKNSWGDRWGEQ 1008



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 19/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F NF+  +++ Y++ E+   R   F  N+      ++ + GT  + VN+F D+S  +   
Sbjct: 727 FENFVNTYNRTYATEEERNLRLSIFRENLGIIRLLRKNEQGTGQYGVNQFADVSTEEFHA 786

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
              GL  D   E+  P  QA       D E              LP +FDWR +G ++ V
Sbjct: 787 FYLGLRPDLRTENNIPLRQAEIP----DIE--------------LPNSFDWRQKGAVTPV 828

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS  G VE  +AI+ N L  LS Q
Sbjct: 829 KNQGMCGSCWAFSVTGNVEGQYAIKHNKLLSLSEQ 863


>gi|400180449|gb|AFP73361.1| cysteine protease [Solanum chilense]
          Length = 344

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKKNMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I    L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGQCGCCWAFSAVGSLEGAYKIATGKLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+ G  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAEGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +   KL   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     E+   
Sbjct: 169 IATGKLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+ G  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAEGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  KNMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
             L E S Q
Sbjct: 172 GKLMEFSEQ 180


>gi|225458701|ref|XP_002284973.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 467

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 166/323 (51%), Gaps = 38/323 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           E  +  H K Y+++ +  RR + F  N+   +++ +E+  T   G+N+F DL+  + + +
Sbjct: 52  EAWLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAENR-TYKVGLNRFADLTNEEYRSM 110

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                      +     A   S+   ++  AF     R GD LPE+ DWR +G + +VK+
Sbjct: 111 Y----------LGTRTAAKRRSSNKISDRYAF-----RVGDSLPESVDWRKKGAVVEVKD 155

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIID 372
           QG C  CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+
Sbjct: 156 QGSCGSCWAFSTIAAVEGINKIVTGGLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIN 215

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S++ YPYKAS+    C    +    V +  Y  +P  +E+ ++K VA + P+SV 
Sbjct: 216 NGGIDSEEDYPYKASDGR--CDQYRKNAKVVTIDGYEDVPENDEKSLEKAVANQ-PVSVA 272

Query: 433 MNANGLFY--YSGGVID----------LNQRLYGT--SIPYWIVKNSWGSDWGE----KV 474
           + A G  +  Y  G+            +    YGT   + YWIVKNSWG+ WGE    ++
Sbjct: 273 IEAGGREFQLYQSGIFTGRCGTALDHGVTAVGYGTENGVDYWIVKNSWGASWGEEGYIRM 332

Query: 475 EDKVGSSGNRTRDLELTGVLPSK 497
           E  + +S      + +    P K
Sbjct: 333 ERDLATSATGKCGIAMEASYPIK 355



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPYKAS+  
Sbjct: 174 INKIVTGGLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYKASDGR 233

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P  +E+ ++K VA + P+SV + A G  +  Y  G+   
Sbjct: 234 --CDQYRKNAKVVTIDGYEDVPENDEKSLEKAVANQ-PVSVAIEAGGREFQLYQSGIF-- 288

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C   A +H +  VGYG E   D     YWIVKNSWG+ WGE+
Sbjct: 289 -TGRCGT-ALDHGVTAVGYGTENGVD-----YWIVKNSWGASWGEE 327



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 16/151 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K Y+++ +  RR + F  N+   +++  E+  T    +N+F DL++ + + +  
Sbjct: 54  WLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAENR-TYKVGLNRFADLTNEEYRSMY- 111

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                    +     A   S+   ++  AF     R GD LPE+ DWR +G + +VK+QG
Sbjct: 112 ---------LGTRTAAKRRSSNKISDRYAF-----RVGDSLPESVDWRKKGAVVEVKDQG 157

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS +  VE ++ I    L  LS Q
Sbjct: 158 SCGSCWAFSTIAAVEGINKIVTGGLISLSEQ 188


>gi|20334373|gb|AAM19207.1|AF493232_1 cysteine protease [Solanum pimpinellifolium]
 gi|400180424|gb|AFP73350.1| cysteine protease [Solanum pimpinellifolium]
 gi|400180433|gb|AFP73354.1| cysteine protease [Solanum lycopersicum]
          Length = 344

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   D +P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DYMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGLMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+      E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSREKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGNCADQINHAVTAIGYGTDEEGQKYWLLKNSWGTSWGE 315



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGLMTNAFDFIIENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
              E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D N   C
Sbjct: 226 RSREKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGN---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +E+       YW++KNSWG+ WGE
Sbjct: 281 ADQI-NHAVTAIGYGTDEEGQ----KYWLLKNSWGTSWGE 315



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   D +P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DYMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|356515046|ref|XP_003526212.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 342

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 160/318 (50%), Gaps = 37/318 (11%)

Query: 175 FSAVGVVEAM----HAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE 230
           F AVG+ + M    H        E  +  + K+Y    +  +R + F  NVE  E + + 
Sbjct: 16  FLAVGISQVMPRKLHQTALRERHENWMAEYGKMYKDAAEKEKRFQIFKDNVEFIESFNAA 75

Query: 231 DSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSL 290
            +     GVN   DL+  + +            D +  L+  +  + T  ++  F++ ++
Sbjct: 76  GNKPYKLGVNHLADLTLEEFK------------DSRNGLKRTYEFSTTTFKLNGFKYENV 123

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQG-KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
               D+PEA DWR +G ++ +K+QG +C   WAFS +   E +H I   +L  LS Q+LV
Sbjct: 124 T---DIPEAIDWRVKGAVTPIKDQGDQCGRFWAFSTIAATEGIHQISTGNLVSLSEQELV 180

Query: 350 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
           DCD  + GC GG M+D  ++II NGG+ S+  YPYK  +      +        ++K Y 
Sbjct: 181 DCDSVDDGCEGGFMEDGFEFIIKNGGITSETNYPYKGVDGTCNTTIAASP--VAQIKGYE 238

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNA-NGLF-YYSGGV------IDLNQRL----YGT-- 455
            +P   EE +KK VA + P+SV ++A N  F +YS G+       DL+  +    YGT  
Sbjct: 239 IVPSYSEEALKKAVANQ-PVSVSIHATNATFMFYSSGIYNGECGTDLDHGVTAVGYGTEN 297

Query: 456 SIPYWIVKNSWGSDWGEK 473
              YWIVKNSWG+ WGEK
Sbjct: 298 GTDYWIVKNSWGTQWGEK 315



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 87/157 (55%), Gaps = 14/157 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  + GC GG M+D  ++II NGG+ S+  YPYK  +      +    
Sbjct: 171 LVSLSEQELVDCDSVDDGCEGGFMEDGFEFIIKNGGITSETNYPYKGVDGTCNTTIAASP 230

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA-NGLF-YYSGGVIDLNQRLCNPKA 615
               ++K Y  +P   EE +KK VA + P+SV ++A N  F +YS G+ +     C    
Sbjct: 231 --VAQIKGYEIVPSYSEEALKKAVANQ-PVSVSIHATNATFMFYSSGIYNGE---CGTDL 284

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +  VGYG E   D     YWIVKNSWG+ WGEK
Sbjct: 285 -DHGVTAVGYGTENGTD-----YWIVKNSWGTQWGEK 315



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 16/156 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R  N+M ++ K+Y    +  +R + F  NVE  E +    +      VN   DL+  + +
Sbjct: 37  RHENWMAEYGKMYKDAAEKEKRFQIFKDNVEFIESFNAAGNKPYKLGVNHLADLTLEEFK 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                       D +  L+  +  + T  ++  F++ ++    D+PEA DWR +G ++ +
Sbjct: 97  ------------DSRNGLKRTYEFSTTTFKLNGFKYENVT---DIPEAIDWRVKGAVTPI 141

Query: 164 KEQG-KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG +C   WAFS +   E +H I   NL  LS Q
Sbjct: 142 KDQGDQCGRFWAFSTIAATEGIHQISTGNLVSLSEQ 177


>gi|400180369|gb|AFP73323.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|356517188|ref|XP_003527271.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 350

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 157/298 (52%), Gaps = 39/298 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K+Y ++E+ L R E F  N+ K  D +++       G+N+F DLS  +  
Sbjct: 47  LFESWMSRHGKIYENIEEKLLRFEIFKDNL-KHIDERNKVVSNYWLGLNEFADLSHREFN 105

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL +D +     P                 F +  +    +LP++ DWR +G ++ 
Sbjct: 106 NKYLGLKVDYSRRRESP---------------EEFTYKDV----ELPKSVDWRKKGAVAP 146

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  +
Sbjct: 147 VKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSF 206

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I++NGG+  ++ YPY   E    C + +EE   V +  Y  +P   E+ + K +A + PL
Sbjct: 207 IVENGGLHKEEDYPYIMEEGT--CEMTKEETQVVTISGYHDVPQNNEQSLLKALANQ-PL 263

Query: 430 SVGMNANG--LFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV       DL+  +    YGT+  + Y  VKNSWGS WGEK
Sbjct: 264 SVAIEASGRDFQFYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYITVKNSWGSKWGEK 321



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 92/163 (56%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  +I++NGG+  ++ YPY   E    C
Sbjct: 171 IVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSFIVENGGLHKEEDYPYIMEEGT--C 228

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +EE   V +  Y  +P   E+ + K +A + PLSV + A+G    +YSGGV D +  
Sbjct: 229 EMTKEETQVVTISGYHDVPQNNEQSLLKALANQ-PLSVAIEASGRDFQFYSGGVFDGH-- 285

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H +  VGYG  +  D     Y  VKNSWGS WGEK
Sbjct: 286 -CGSDL-DHGVAAVGYGTAKGVD-----YITVKNSWGSKWGEK 321



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 28/188 (14%)

Query: 19  TFMIKVALLESNIFQTRGY-------LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVT 71
           +F +  +L     F   GY       ++  +  F ++M  H K+Y ++E+ L R E F  
Sbjct: 15  SFCLFASLAFGRDFSIVGYSSEDLKSMDKLIELFESWMSRHGKIYENIEEKLLRFEIFKD 74

Query: 72  NVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQT 130
           N++  ++  +  S   +  +N+F DLS  +   +  GL +D +     P           
Sbjct: 75  NLKHIDERNKVVSNYWL-GLNEFADLSHREFNNKYLGLKVDYSRRRESP----------- 122

Query: 131 DTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGN 190
                 F +  +    +LP++ DWR +G ++ VK QG C  CWAFS V  VE ++ I   
Sbjct: 123 ----EEFTYKDV----ELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEGINQIVTG 174

Query: 191 NLTELSVQ 198
           NLT LS Q
Sbjct: 175 NLTSLSEQ 182


>gi|195395906|ref|XP_002056575.1| GJ11017 [Drosophila virilis]
 gi|194143284|gb|EDW59687.1| GJ11017 [Drosophila virilis]
          Length = 599

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 149/302 (49%), Gaps = 43/302 (14%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           +  V++  +  +S E  +R    F  +++  ++  + + G+A +G+ +F D++ ++  Q 
Sbjct: 295 KFQVKYKRRYANSAEHQMRL-RIFRQSLKTIQELNANEQGSAKYGITEFADMTSTEYAQR 353

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
            GL         Q S   P           A          +LP+ FDWR +  ++ VK 
Sbjct: 354 AGL--------WQRSEGKPTGGAAAVVPAYA---------GELPKEFDWRQKNAVTHVKN 396

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN 373
           QG+C  CWAFS  G +E  +AI+   L E S Q+L+DCD  +  CNGG MD+A + I D 
Sbjct: 397 QGQCGSCWAFSVTGNIEGAYAIKTGDLQEFSEQELLDCDSKDSACNGGLMDNAYKAIKDI 456

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+  +  YPY+  + +  C         V+V  +  +P G E  M++W+ T GP+S+G+
Sbjct: 457 GGLEYESEYPYEGKKKQ--CHFNRTLS-HVQVSGFVDLPKGNETAMQEWLLTNGPISIGI 513

Query: 434 NANGLFYYSGGVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWG 471
           NAN + +Y GGV      L              YG S        +PYWIVKNSWG  WG
Sbjct: 514 NANAMQFYRGGVSHPWSPLCSKKNLDHGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWG 573

Query: 472 EK 473
           E+
Sbjct: 574 EQ 575



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 93/156 (59%), Gaps = 4/156 (2%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L   + ++L+DCD  +  CNGG MD+A + I D GG+  +  YPY+  + +  C      
Sbjct: 423 LQEFSEQELLDCDSKDSACNGGLMDNAYKAIKDIGGLEYESEYPYEGKKKQ--CHFNRTL 480

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
              V+V  +  +P G E  M++W+ T GP+S+G+NAN + +Y GGV      LC+ K  +
Sbjct: 481 S-HVQVSGFVDLPKGNETAMQEWLLTNGPISIGINANAMQFYRGGVSHPWSPLCSKKNLD 539

Query: 618 HALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           H ++IVGYG  +  +   ++PYWIVKNSWG  WGE+
Sbjct: 540 HGVLIVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 575



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 17/161 (10%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           LN     F  F   + + Y++  +   R   F  +++  ++    + G+A + + +F D+
Sbjct: 286 LNKVDHLFHKFQVKYKRRYANSAEHQMRLRIFRQSLKTIQELNANEQGSAKYGITEFADM 345

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           + ++  Q  GL         Q S   P           A          +LP+ FDWR +
Sbjct: 346 TSTEYAQRAGL--------WQRSEGKPTGGAAAVVPAYA---------GELPKEFDWRQK 388

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             ++ VK QG+C  CWAFS  G +E  +AI+  +L E S Q
Sbjct: 389 NAVTHVKNQGQCGSCWAFSVTGNIEGAYAIKTGDLQEFSEQ 429


>gi|18418684|ref|NP_567983.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana]
 gi|71153408|sp|O65493.1|XCP1_ARATH RecName: Full=Xylem cysteine proteinase 1; Short=AtXCP1; Flags:
           Precursor
 gi|6708181|gb|AAF25831.1|AF191027_1 papain-type cysteine endopeptidase XCP1 [Arabidopsis thaliana]
 gi|3080415|emb|CAA18734.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|7270487|emb|CAB80252.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|26449881|dbj|BAC42063.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|28827736|gb|AAO50712.1| unknown protein [Arabidopsis thaliana]
 gi|332661101|gb|AEE86501.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana]
          Length = 355

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/324 (35%), Positives = 165/324 (50%), Gaps = 41/324 (12%)

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELS---VQHHDKVYSSVEDLLRRHENFVTNVEKAE 225
           CA    FS VG     H    + L EL    +  H K Y SVE+ + R E F  N+    
Sbjct: 25  CAFARDFSIVGYTPE-HLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHI- 82

Query: 226 DYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRA 284
           D ++ +  +   G+N+F DL+  + + +  GL         QPS                
Sbjct: 83  DQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKPQFSRKRQPSAN-------------- 128

Query: 285 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELS 344
           F++  +    DLP++ DWR +G ++ VK+QG+C  CWAFS V  VE ++ I   +L+ LS
Sbjct: 129 FRYRDIT---DLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLS 185

Query: 345 VQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKV 403
            Q+L+DCD + N GCNGG MD A QYII  GG+  +  YPY   E    C   +E+  +V
Sbjct: 186 EQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGI--CQEQKEDVERV 243

Query: 404 KVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL--- 452
            +  Y  +P  ++E + K +A + P+SV + A+G    +Y GGV       DL+  +   
Sbjct: 244 TISGYEDVPENDDESLVKALAHQ-PVSVAIEASGRDFQFYKGGVFNGKCGTDLDHGVAAV 302

Query: 453 -YGTS--IPYWIVKNSWGSDWGEK 473
            YG+S    Y IVKNSWG  WGEK
Sbjct: 303 GYGSSKGSDYVIVKNSWGPRWGEK 326



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 88/163 (53%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +    LS L+ ++L+DCD + N GCNGG MD A QYII  GG+  +  YPY   E    C
Sbjct: 176 ITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGI--C 233

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              +E+  +V +  Y  +P  ++E + K +A + P+SV + A+G    +Y GGV +    
Sbjct: 234 QEQKEDVERVTISGYEDVPENDDESLVKALAHQ-PVSVAIEASGRDFQFYKGGVFNGK-- 290

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H +  VGYG  +  D     Y IVKNSWG  WGEK
Sbjct: 291 -CGTDL-DHGVAAVGYGSSKGSD-----YVIVKNSWGPRWGEK 326



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 19/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           F ++M +H K Y SVE+ + R E F  N+    D +  +  +    +N+F DL+  + + 
Sbjct: 51  FESWMSEHSKAYKSVEEKVHRFEVFRENLMHI-DQRNNEINSYWLGLNEFADLTHEEFKG 109

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +  GL         QPS                F++  +    DLP++ DWR +G ++ V
Sbjct: 110 RYLGLAKPQFSRKRQPSAN--------------FRYRDIT---DLPKSVDWRKKGAVAPV 152

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFS V  VE ++ I   NL+ LS Q
Sbjct: 153 KDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQ 187


>gi|44844206|emb|CAF32699.1| cathepsin L-like cysteine proteinase [Leishmania infantum]
          Length = 381

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 159/316 (50%), Gaps = 22/316 (6%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK  G C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWREKGAVTPVKXXGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN--GGVV 377
           CWAFSAVG +E+  A  G+ L  LS QQLV CD  + GCNGG M  A ++++ +  G V 
Sbjct: 150 CWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   CL   +     ++  Y  IP   E  M  W+A  GP+++ ++A+
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDAS 268

Query: 437 GLFYYSGGVIDLNQRLYGTSIPYWIVKNSWGSDWGEK--VEDKVGSSGNRTRDLELTGVL 494
               Y  GV+ +     G  +PYW++KNSWG DWGEK  V   +G +     +  ++  +
Sbjct: 269 SFMSYQSGVLLVGYNKTG-GVPYWVIKNSWGEDWGEKGYVRVAMGLNACLLSEYPVSAHV 327

Query: 495 PSKLSRLATEKLVDCD 510
           P  L+  +T     C+
Sbjct: 328 PQSLTPGSTASGNSCE 343



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 26/158 (16%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L  L+ ++LV CD  + GCNGG M  A ++++ +  G V ++++YPY +   +   CL  
Sbjct: 170 LVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNS 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +     ++  Y  IP   E  M  W+A  GP+++ ++A+    Y  GV+          
Sbjct: 230 SKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDASSFMSYQSGVL---------- 278

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                  +VGY     K G  +PYW++KNSWG DWGEK
Sbjct: 279 -------LVGY----NKTG-GVPYWVIKNSWGEDWGEK 304



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK  G C  CWAFSAVG +E+  A  G+ L  LS Q 
Sbjct: 134 EKGAVTPVKXXGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQ 177


>gi|400180451|gb|AFP73362.1| cysteine protease [Solanum chilense]
          Length = 344

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GC+GG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S+  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISSESDYEYLG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GC+GG M +A  +I +NGG+ S+  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIKENGGISSESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPELSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|355344587|gb|AER60490.1| cysteine proteases [Gossypium hirsutum]
          Length = 371

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 151/298 (50%), Gaps = 45/298 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  H K Y+ + +  +R E F  N+   +++ S ++ T   G+NKF DL+  + +     
Sbjct: 49  VIQHGKAYNGIGEEEKRFEIFKDNLRFIDEHNSNNNTTYKLGLNKFADLTNQEYR----- 103

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN------SLRHGDDLPEAFDWRAEGVISK 310
                         A F   +TD   R  +        + R GD+LP++ DWR  G +S 
Sbjct: 104 --------------AKFLGTRTDPRRRLMKSKIPSSRYAHRAGDNLPDSVDWRDHGAVSP 149

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK+QG C  CWAFS +  VE ++ I    L  LS Q+LVDCD S + GCNGG MD A Q+
Sbjct: 150 VKDQGSCGSCWAFSTIATVEGINKIVSGELVSLSEQELVDCDRSYDAGCNGGLMDYAFQF 209

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I+DNGG+ +++ YPY    ++  C   ++    V +  Y  +P   E  +KK VA + P+
Sbjct: 210 IMDNGGIDTEKDYPYLGFNNQ--CDPTKKNAKVVSIDGYEDVP-NNENALKKAVAHQ-PV 265

Query: 430 SVGMNANGLFY--YSGGVIDLNQRL----------YGT---SIPYWIVKNSWGSDWGE 472
           S+ + A G  +  Y  GV +    L          YGT      YWIV+NSWGS+WGE
Sbjct: 266 SIAIEAGGRAFQLYESGVFNGECGLALDHGVVAVGYGTDDNGQDYWIVRNSWGSNWGE 323



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  +L  L+ ++LVDCD S + GCNGG MD A Q+I+DNGG+ +++ YPY    ++
Sbjct: 171 INKIVSGELVSLSEQELVDCDRSYDAGCNGGLMDYAFQFIMDNGGIDTEKDYPYLGFNNQ 230

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C   ++    V +  Y  +P   E  +KK VA + P+S+ + A G  +  Y  GV + 
Sbjct: 231 --CDPTKKNAKVVSIDGYEDVP-NNENALKKAVAHQ-PVSIAIEAGGRAFQLYESGVFNG 286

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              L    A +H ++ VGYG     D     YWIV+NSWGS+WGE
Sbjct: 287 ECGL----ALDHGVVAVGYG----TDDNGQDYWIVRNSWGSNWGE 323



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 25/153 (16%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLD 111
           H K Y+ + +  +R E F  N+   +++   ++ T    +NKF DL++ + +        
Sbjct: 52  HGKAYNGIGEEEKRFEIFKDNLRFIDEHNSNNNTTYKLGLNKFADLTNQEYR-------- 103

Query: 112 STLEDIQPSLQAPFSSNQTDTEMRAFQFN------SLRHGDDLPEAFDWRAEGVISKVKE 165
                      A F   +TD   R  +        + R GD+LP++ DWR  G +S VK+
Sbjct: 104 -----------AKFLGTRTDPRRRLMKSKIPSSRYAHRAGDNLPDSVDWRDHGAVSPVKD 152

Query: 166 QGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           QG C  CWAFS +  VE ++ I    L  LS Q
Sbjct: 153 QGSCGSCWAFSTIATVEGINKIVSGELVSLSEQ 185


>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis]
 gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis]
          Length = 341

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 157/307 (51%), Gaps = 38/307 (12%)

Query: 183 AMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKF 242
           ++H    N   E+ +  + +VY    +  RR E F  NVE  E +    +      +N+F
Sbjct: 28  SLHDAAMNERHEMWMVKYGRVYKDNSEKERRFEIFRNNVEFIESFNKPGNRPYKLDINEF 87

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQA-PFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 301
            DL               T E+ + S      SSN   +E  +F++ ++     +P + D
Sbjct: 88  ADL---------------TNEEFKASRNGYKRSSNVGLSEKSSFRYGNVTA---VPTSMD 129

Query: 302 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCN 359
           WR +G ++ +K+QG+C CCWAFSAV  +E +  +    L  LS Q+LVDCD S  + GC 
Sbjct: 130 WRQKGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDTSGEDQGCE 189

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG MDDA ++I  NGG+ ++  YPY+ ++    C   +      K+  Y  +P   E+ +
Sbjct: 190 GGLMDDAFEFIKQNGGLTTEANYPYQGTDGT--CNTNKAGNDAAKITGYEDVPANSEDAL 247

Query: 420 KKWVATRGPLSVGMNANG--LFYYSGGVI--DLNQRL--------YGTS--IPYWIVKNS 465
            K VA++ P+SV ++A+G    +YSGGV   D    L        YGTS    YW+VKNS
Sbjct: 248 LKAVASQ-PVSVAIDASGSAFQFYSGGVFTGDCGTELDHGVTAVGYGTSDGTKYWLVKNS 306

Query: 466 WGSDWGE 472
           WG+ WGE
Sbjct: 307 WGTSWGE 313



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 94/168 (55%), Gaps = 20/168 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD S  + GC GG MDDA ++I  NGG+ ++  YPY+ ++ 
Sbjct: 160 ITKLSTGKLISLSEQELVDCDTSGEDQGCEGGLMDDAFEFIKQNGGLTTEANYPYQGTDG 219

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI- 604
              C   +      K+  Y  +P   E+ + K VA++ P+SV ++A+G    +YSGGV  
Sbjct: 220 T--CNTNKAGNDAAKITGYEDVPANSEDALLKAVASQ-PVSVAIDASGSAFQFYSGGVFT 276

Query: 605 -DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            D    L      +H +  VGYG     DGT   YW+VKNSWG+ WGE
Sbjct: 277 GDCGTEL------DHGVTAVGYG---TSDGT--KYWLVKNSWGTSWGE 313



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 24/195 (12%)

Query: 21  MIKVALLESNIFQTRGYLNSPVTRFLN-----FMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           ++ VALL   ++ ++ +  S     +N     +M  + +VY    +  RR E F  NVE 
Sbjct: 9   LMFVALLVVGLWVSQAWSRSLHDAAMNERHEMWMVKYGRVYKDNSEKERRFEIFRNNVEF 68

Query: 76  AEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA-PFSSNQTDTEM 134
            E + +  +     ++N+F DL++               E+ + S      SSN   +E 
Sbjct: 69  IESFNKPGNRPYKLDINEFADLTN---------------EEFKASRNGYKRSSNVGLSEK 113

Query: 135 RAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTE 194
            +F++ ++     +P + DWR +G ++ +K+QG+C CCWAFSAV  +E +  +    L  
Sbjct: 114 SSFRYGNVTA---VPTSMDWRQKGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLIS 170

Query: 195 LSVQHHDKVYSSVED 209
           LS Q      +S ED
Sbjct: 171 LSEQELVDCDTSGED 185


>gi|400180445|gb|AFP73359.1| cysteine protease, partial [Solanum chilense]
          Length = 345

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GC+GG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S+  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISSESDYEYLG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GC+GG M +A  +I +NGG+ S+  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIKENGGISSESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPELSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180435|gb|AFP73355.1| cysteine protease [Solanum pennellii]
          Length = 344

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--VSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 NQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCANRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ANRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 14/152 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLT 106
           +M  H +VY    +   R   F  N++  E   +  + +    +N+F D++  + L + T
Sbjct: 42  WMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFT 101

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           GLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK Q
Sbjct: 102 GLNIPNSY--VSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVKNQ 148

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G+C CCWAFSAVG +E  + I   NL E S Q
Sbjct: 149 GQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQ 180


>gi|400180371|gb|AFP73324.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F  N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FIINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F  N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FIINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180361|gb|AFP73319.1| cysteine protease [Solanum peruvianum]
 gi|400180397|gb|AFP73337.1| cysteine protease [Solanum peruvianum]
 gi|400180401|gb|AFP73339.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F  N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FIINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F  N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FIINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|258618831|gb|ACV84238.1| cysteine proteinase L [Anisakis simplex]
          Length = 411

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 146/290 (50%), Gaps = 32/290 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y    +   R +NFV N++  +  Q +      FG+ +F D SE +++ +T     
Sbjct: 111 YGRKYHGYHETRERFQNFVNNMKYIKKIQ-QGKQNVQFGITRFADWSEEEMKSMTCGE-- 167

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                 +P+++  +     D      +F         PE+FDWR++ V++ +K+Q +C  
Sbjct: 168 ------EPNMEMRYDREYYDGSYED-EFTLYDGFGGRPESFDWRSKNVVTDIKDQQRCGS 220

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAF AVGVVE+M+AI  N L  LS QQLVDCDM++ GC+GG    ALQYI  N G+V +
Sbjct: 221 CWAFGAVGVVESMNAIAKNPLVSLSEQQLVDCDMNDNGCDGGYRPYALQYIRHN-GIVPE 279

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG-L 438
           + YPY   E +   L    +   VK  +Y R     E  M  +V  +GPLSVG+N    L
Sbjct: 280 ELYPYAGKELDSCKLNTTVQRVYVKTVKYIR---RNESAMADFVFYKGPLSVGINVTKDL 336

Query: 439 FYYSGGVI-----DLNQRLYGTSI------------PYWIVKNSWGSDWG 471
           F+Y  GV      D  Q   GT               YWI+KNSWG  WG
Sbjct: 337 FHYQSGVFTPSKEDCEQNPQGTHALAVVGYGSQNGEDYWIIKNSWGKRWG 386



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 89/163 (54%), Gaps = 11/163 (6%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  +  + L  L+ ++LVDCDM++ GC+GG    ALQYI  N G+V ++ YPY   E + 
Sbjct: 233 MNAIAKNPLVSLSEQQLVDCDMNDNGCDGGYRPYALQYIRHN-GIVPEELYPYAGKELDS 291

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG-LFYYSGGVIDLNQ 608
             L    +   VK  +Y R     E  M  +V  +GPLSVG+N    LF+Y  GV   ++
Sbjct: 292 CKLNTTVQRVYVKTVKYIR---RNESAMADFVFYKGPLSVGINVTKDLFHYQSGVFTPSK 348

Query: 609 RLCNPKAQ-NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
             C    Q  HAL +VGYG +  +D     YWI+KNSWG  WG
Sbjct: 349 EDCEQNPQGTHALAVVGYGSQNGED-----YWIIKNSWGKRWG 386



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           + +F++FM  + + Y    +   R +NFV N++  +  Q+       F + +F D S+ +
Sbjct: 101 IDQFIDFMNVYGRKYHGYHETRERFQNFVNNMKYIKKIQQGKQNVQ-FGITRFADWSEEE 159

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
           ++ +T           +P+++  +     D      +F         PE+FDWR++ V++
Sbjct: 160 MKSMTCGE--------EPNMEMRYDREYYDGSYED-EFTLYDGFGGRPESFDWRSKNVVT 210

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +K+Q +C  CWAF AVGVVE+M+AI  N L  LS Q 
Sbjct: 211 DIKDQQRCGSCWAFGAVGVVESMNAIAKNPLVSLSEQQ 248


>gi|400180461|gb|AFP73367.1| cysteine protease [Solanum peruvianum]
 gi|400180473|gb|AFP73373.1| cysteine protease [Solanum peruvianum]
 gi|400180475|gb|AFP73374.1| cysteine protease [Solanum peruvianum]
 gi|400180479|gb|AFP73376.1| cysteine protease [Solanum peruvianum]
 gi|400180481|gb|AFP73377.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F  N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FIINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F  N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FIINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|400180399|gb|AFP73338.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F  N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FIINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F  N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FIINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|332326593|gb|AEE42620.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 168/340 (49%), Gaps = 46/340 (13%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           +VY +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  + 
Sbjct: 47  RVYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGAAY 104

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
               +      +   + D                +P+A DWR +G ++ VK+QG C  CW
Sbjct: 105 FAAAKQHAGQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGACGSCW 151

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVVSD 379
           AFSAVG +E+  A+ G+ LT LS QQLV CD  + GC GG M  A ++++   NG + ++
Sbjct: 152 AFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCGGGLMTQAFEWLLRNMNGTMFTE 211

Query: 380 QAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
            +YPY +S  +   C    +     ++  Y  I    E  M  W+A  GP+S+G++A+  
Sbjct: 212 DSYPYVSSXGDVPECTNSSQLVPGARIDGYVTIE-SSETVMAAWLAKSGPISIGVDASSF 270

Query: 439 FYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK--VEDKVGSSGNR 484
             Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK  V   +G +   
Sbjct: 271 MSYESGVLTSCAGBXLNHGVLLVGYNXTGEVPYWVIKNSWGEDWGEKGYVRVAMGVNACL 330

Query: 485 TRDLELTGVLPSKLS-------------RLATEKLVDCDM 511
             +  ++  +P  L+             R+  E+++  DM
Sbjct: 331 LTEYPVSAHVPQSLAPGPSTESEERAPKRVMVEQVICTDM 370



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L+ L+ ++LV CD  + GC GG M  A ++++ N  G + ++ +YPY +S  +   C  
Sbjct: 169 RLTALSEQQLVSCDDKDSGCGGGLMTQAFEWLLRNMNGTMFTEDSYPYVSSXGDVPECTN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             +     ++  Y  I    E  M  W+A  GP+S+G++A+    Y  GV+      C  
Sbjct: 229 SSQLVPGARIDGYVTIE-SSETVMAAWLAKSGPISIGVDASSFMSYESGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 BXLNHGVLLVGYNXTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + +VY +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ LT LS Q 
Sbjct: 134 EKGAVTPVKDQGACGSCWAFSAVGNIESQWAVAGHRLTALSEQQ 177


>gi|242045644|ref|XP_002460693.1| hypothetical protein SORBIDRAFT_02g033270 [Sorghum bicolor]
 gi|241924070|gb|EER97214.1| hypothetical protein SORBIDRAFT_02g033270 [Sorghum bicolor]
          Length = 373

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 154/310 (49%), Gaps = 49/310 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTG 255
           V+ H + YS  E+  RR   F  N+ +A  +Q+ D  TA  GV  F DL+  + + +LTG
Sbjct: 53  VRRHGRRYSGPEEYARRLRVFAANLARAAAHQALDP-TARHGVTPFSDLTREEFEARLTG 111

Query: 256 LNLDSTLEDIQPSLQ--APFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
           +   +   D+Q  +   AP +   +  E+             LP +FDWR +G ++ VK 
Sbjct: 112 VRAGAG-GDVQRLVMSGAPAAPPASQEEV-----------SRLPASFDWRDKGAVTGVKM 159

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMD 364
           QG C  CWAFS  G VE  + +    L ELS QQLVDCD +         N GC GG M 
Sbjct: 160 QGACGSCWAFSTTGAVEGANFLATGKLLELSEQQLVDCDHTCSAVAQNECNNGCAGGLMT 219

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
           +A  Y++ +GG++  +AYPY  +     C     +   V+V  ++ +P G+E +++  + 
Sbjct: 220 NAYAYLMKSGGLMEQRAYPYTGAPGP--CRFDPAKA-AVRVANFTAVPAGDEAQIRAALV 276

Query: 425 TRGPLSVGMNANGLFYYSGGV----------IDLNQRLYGTSI-----------PYWIVK 463
            RGPL+VG+NA  +  Y GGV          ++    L G              PYWI+K
Sbjct: 277 RRGPLAVGLNAAFMQTYVGGVSCPLLCPRAWVNHGVLLVGYGARGFAALRLGYRPYWIIK 336

Query: 464 NSWGSDWGEK 473
           NSWG  WGE+
Sbjct: 337 NSWGERWGEQ 346



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 20/169 (11%)

Query: 497 KLSRLATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD +         N GC GG M +A  Y++ +GG++  +AYPY  +  
Sbjct: 185 KLLELSEQQLVDCDHTCSAVAQNECNNGCAGGLMTNAYAYLMKSGGLMEQRAYPYTGAPG 244

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
              C     +   V+V  ++ +P G+E +++  +  RGPL+VG+NA  +  Y GGV   +
Sbjct: 245 P--CRFDPAKA-AVRVANFTAVPAGDEAQIRAALVRRGPLAVGLNAAFMQTYVGGV---S 298

Query: 608 QRLCNPKA-QNHALIIVGYGEE---EKKDGTSIPYWIVKNSWGSDWGEK 652
             L  P+A  NH +++VGYG       + G   PYWI+KNSWG  WGE+
Sbjct: 299 CPLLCPRAWVNHGVLLVGYGARGFAALRLGYR-PYWIIKNSWGERWGEQ 346



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 16/162 (9%)

Query: 41  PVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDS 100
           P  +F  F+R H + YS  E+  RR   F  N+ +A  +Q  D  TA   V  F DL+  
Sbjct: 45  PEAQFAAFVRRHGRRYSGPEEYARRLRVFAANLARAAAHQALDP-TARHGVTPFSDLTRE 103

Query: 101 DLQ-QLTGLNLDSTLEDIQPSLQ--APFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           + + +LTG+   +   D+Q  +   AP +   +  E+             LP +FDWR +
Sbjct: 104 EFEARLTGVRAGAG-GDVQRLVMSGAPAAPPASQEEV-----------SRLPASFDWRDK 151

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           G ++ VK QG C  CWAFS  G VE  + +    L ELS Q 
Sbjct: 152 GAVTGVKMQGACGSCWAFSTTGAVEGANFLATGKLLELSEQQ 193


>gi|400180373|gb|AFP73325.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H  VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGHVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GC+GG M +A  +I +
Sbjct: 147 HQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S+  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISSESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GC+GG M +A  +I +NGG+ S+  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIKENGGISSESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H  VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGHVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|357619726|gb|EHJ72185.1| cathepsin [Danaus plexippus]
          Length = 1118

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 166/307 (54%), Gaps = 46/307 (14%)

Query: 229 SEDSGTAVFGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM-RAFQ 286
           +E S  AV+G+NKF DLS+ + ++  TGL  +          ++P + +   T++  +F 
Sbjct: 2   NERSSNAVYGINKFSDLSKEEFVKYYTGLKRE----------ESPSNEDHKKTDLPESFN 51

Query: 287 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQ 346
             +       P+ FDWR +GV+S +K Q  C  CWAFSA   VE++HAI+   L ++S Q
Sbjct: 52  VTA-------PDQFDWRKKGVVSSIKNQKHCGSCWAFSAAANVESIHAIKTGKLIDVSEQ 104

Query: 347 QLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           QL+DCD  + GC+GG   DAL+Y + NG  +S ++YPY A E   G    +    ++++K
Sbjct: 105 QLLDCDKYDSGCSGGLPWDALRYFVANGA-MSLKSYPYVAKE---GKCRYDSSKVEIRLK 160

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV-IDLNQRLY------------ 453
           EY       E+++K+ +   GPLS+ + ++ L  Y+GG+ I+   R Y            
Sbjct: 161 EYKHKEKLSEDQIKEHLYNIGPLSIAITSSPLASYNGGILIEECHRSYLINHAVLLVGYG 220

Query: 454 -GTSIPYWIVKNSWGSDWGEKVEDKVGSSGNRTRDLELTGVLPSKLSRLATEKLVDCDMS 512
               + YWIVKNSWG +WGE        +G     + +  +L  + S++  ++ VD D+ 
Sbjct: 221 KENGVKYWIVKNSWGQNWGE--------NGYFRMKMGVNCLLRVR-SKVTEQQPVDYDIW 271

Query: 513 NGGCNGG 519
           + GC+GG
Sbjct: 272 DEGCSGG 278



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 159/299 (53%), Gaps = 39/299 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-L 250
           L E  ++ ++K Y   E    R + FV N+ K  +  +E S  AV+G+NKF DLS+ + +
Sbjct: 518 LFEQFIKDYNKEYDESEKE-ERFKIFVNNL-KDINAMNERSSNAVYGINKFSDLSKEEFI 575

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM-RAFQFNSLRHGDDLPEAFDWRAEGVIS 309
           +  TGL  +          ++P + +   T++  +F   +       P+ FDWR +GV+S
Sbjct: 576 KYYTGLKRE----------ESPSNEDHKKTDLPESFNVTA-------PDQFDWRKKGVVS 618

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQY 369
            +K Q  C  CWAFSA G VE++HAI+   L  +S QQLVDCD  + GC+GG   +A++Y
Sbjct: 619 SIKNQKHCGSCWAFSAAGNVESIHAIKTGKLVHVSEQQLVDCDSQDSGCSGGLTWNAMRY 678

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
              NG  VS ++YPY A      C   +     +++K+Y  I    E+++K+ +   G L
Sbjct: 679 FRTNGA-VSLKSYPYVA--QNENCRY-DSNKVVIRLKDYKHITQLSEDQIKEHLYNIGLL 734

Query: 430 SVGMNANGLFYYSGGVIDLNQRL------------YG--TSIPYWIVKNSWGSDWGEKV 474
           S+ + +  L +Y GG++    R             YG   S+ YWIVKNSWG + GEKV
Sbjct: 735 SIDITSTQLTWYEGGILIEECRRSDLVDHAVLLVEYGKENSVEYWIVKNSWGQNGGEKV 793



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 159/299 (53%), Gaps = 39/299 (13%)

Query: 192  LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
            L E  ++ ++K Y   E    R + FV N+ K  +  +E S  AV+G+NKF DLS+ +  
Sbjct: 818  LFEQFIKDYNKEYDESEKE-ERFKIFVNNL-KDINAMNERSSNAVYGINKFSDLSKDEFV 875

Query: 252  QL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEM-RAFQFNSLRHGDDLPEAFDWRAEGVIS 309
            +  TGL  +          ++P + +   T++ ++F   +       P+ FDWR +GV+S
Sbjct: 876  KFYTGLKRE----------ESPSNEDHKKTDLPKSFNVTA-------PDQFDWRKKGVVS 918

Query: 310  KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQY 369
             VK QG C  CWAFS  G VE+++AI+   L ++S QQLVDCD  N GC+GG       +
Sbjct: 919  SVKFQGHCVSCWAFSVAGNVESINAIKTGKLIDVSEQQLVDCDEWNFGCSGGIACSKSHF 978

Query: 370  -IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
                  G +S ++YPY   E +  C     +   +++K+Y       E+E+K+++   GP
Sbjct: 979  SYFHKKGAMSLESYPYVGKEGQ--CRYNSSK-VVIRLKDYQYFIALSEDEIKEYLYNIGP 1035

Query: 429  LSVGMNANGLFYYSGGVI--------DLNQRL----YG--TSIPYWIVKNSWGSDWGEK 473
            LS+ ++++ + +Y GG++          N  +    YG    + YWIVKNSWG +WGEK
Sbjct: 1036 LSIDIDSSQIHHYKGGIVIKECQEVKKTNHAVLLVGYGKENGVEYWIVKNSWGQNWGEK 1094



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 92/172 (53%), Gaps = 21/172 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-L 250
           L E  ++ ++K Y   E    R + FV N+ K  +  +E S  AV+G+NKF DLS+ + +
Sbjct: 301 LFEQFIKDYNKEYDESEKE-ERFKIFVNNL-KDINAMNERSSNAVYGINKFSDLSKEEFI 358

Query: 251 QQLTGLNLD-STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
           +  TGL  D  T  +   S   P S N T                  P+ FDWR +GV+S
Sbjct: 359 KYYTGLKRDRCTTTEHHKSTDLPKSFNIT-----------------APDQFDWRKKGVVS 401

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGG 361
            VK Q  C  CWAFSA   VE++HAI+   L ++S QQL+DCD  + GC+GG
Sbjct: 402 SVKNQRHCGSCWAFSAAANVESIHAIKTGKLIDVSEQQLLDCDKYDSGCSGG 453



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 94/162 (58%), Gaps = 11/162 (6%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  +   KL  ++ ++L+DCD  + GC+GG   DAL+Y + NG + S ++YPY A E   
Sbjct: 90  IHAIKTGKLIDVSEQQLLDCDKYDSGCSGGLPWDALRYFVANGAM-SLKSYPYVAKE--- 145

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
           G    +    ++++KEY       E+++K+ +   GPLS+ + ++ L  Y+GG+  L + 
Sbjct: 146 GKCRYDSSKVEIRLKEYKHKEKLSEDQIKEHLYNIGPLSIAITSSPLASYNGGI--LIEE 203

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                  NHA+++VGYG+E       + YWIVKNSWG +WGE
Sbjct: 204 CHRSYLINHAVLLVGYGKE-----NGVKYWIVKNSWGQNWGE 240



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 13/165 (7%)

Query: 490  LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQY-IIDNGGVVSDQAYPYKASESE 548
            +  +   KL  ++ ++LVDCD  N GC+GG       +      G +S ++YPY   E +
Sbjct: 941  INAIKTGKLIDVSEQQLVDCDEWNFGCSGGIACSKSHFSYFHKKGAMSLESYPYVGKEGQ 1000

Query: 549  RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
              C     +   +++K+Y       E+E+K+++   GPLS+ ++++ + +Y GG++    
Sbjct: 1001 --CRYNSSK-VVIRLKDYQYFIALSEDEIKEYLYNIGPLSIDIDSSQIHHYKGGIV---I 1054

Query: 609  RLCNP-KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            + C   K  NHA+++VGYG+E       + YWIVKNSWG +WGEK
Sbjct: 1055 KECQEVKKTNHAVLLVGYGKE-----NGVEYWIVKNSWGQNWGEK 1094



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 93/166 (56%), Gaps = 11/166 (6%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  +   KL  ++ ++LVDCD  + GC+GG   +A++Y   NG  VS ++YPY A     
Sbjct: 641 IHAIKTGKLVHVSEQQLVDCDSQDSGCSGGLTWNAMRYFRTNGA-VSLKSYPYVA--QNE 697

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C   +     +++K+Y  I    E+++K+ +   G LS+ + +  L +Y GG++    R
Sbjct: 698 NCRY-DSNKVVIRLKDYKHITQLSEDQIKEHLYNIGLLSIDITSTQLTWYEGGILIEECR 756

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
             +    +HA+++V YG+E      S+ YWIVKNSWG + GEKV L
Sbjct: 757 RSD--LVDHAVLLVEYGKE-----NSVEYWIVKNSWGQNGGEKVAL 795



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 83/170 (48%), Gaps = 22/170 (12%)

Query: 33  QTRGY-LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEV 91
           Q R Y L    T F  F++D++K Y   E    R + FV N+ K  +   E S  AV+ +
Sbjct: 289 QRRLYSLEEAPTLFEQFIKDYNKEYDESEKE-ERFKIFVNNL-KDINAMNERSSNAVYGI 346

Query: 92  NKFFDLSDSD-LQQLTGLNLD-STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLP 149
           NKF DLS  + ++  TGL  D  T  +   S   P S N T                  P
Sbjct: 347 NKFSDLSKEEFIKYYTGLKRDRCTTTEHHKSTDLPKSFNIT-----------------AP 389

Query: 150 EAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + FDWR +GV+S VK Q  C  CWAFSA   VE++HAI+   L ++S Q 
Sbjct: 390 DQFDWRKKGVVSSVKNQRHCGSCWAFSAAANVESIHAIKTGKLIDVSEQQ 439



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 22/170 (12%)

Query: 33  QTRGY-LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEV 91
           Q R Y L    T F  F++D++K Y   E    R + FV N+ K  +   E S  AV+ +
Sbjct: 506 QRRLYSLEEAPTLFEQFIKDYNKEYDESEKE-ERFKIFVNNL-KDINAMNERSSNAVYGI 563

Query: 92  NKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM-RAFQFNSLRHGDDLP 149
           NKF DLS  + ++  TGL  +          ++P + +   T++  +F   +       P
Sbjct: 564 NKFSDLSKEEFIKYYTGLKRE----------ESPSNEDHKKTDLPESFNVTA-------P 606

Query: 150 EAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + FDWR +GV+S +K Q  C  CWAFSA G VE++HAI+   L  +S Q 
Sbjct: 607 DQFDWRKKGVVSSIKNQKHCGSCWAFSAAGNVESIHAIKTGKLVHVSEQQ 656



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 21/164 (12%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L    T F  F++D++K Y   E    R + FV N+ K  +   E S  AV+ +NKF DL
Sbjct: 812 LEEAPTLFEQFIKDYNKEYDESEKE-ERFKIFVNNL-KDINAMNERSSNAVYGINKFSDL 869

Query: 98  SDSDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEM-RAFQFNSLRHGDDLPEAFDWR 155
           S  +  +  TGL  +          ++P + +   T++ ++F   +       P+ FDWR
Sbjct: 870 SKDEFVKFYTGLKRE----------ESPSNEDHKKTDLPKSFNVTA-------PDQFDWR 912

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +GV+S VK QG C  CWAFS  G VE+++AI+   L ++S Q 
Sbjct: 913 KKGVVSSVKFQGHCVSCWAFSVAGNVESINAIKTGKLIDVSEQQ 956



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 19/120 (15%)

Query: 82  EDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM-RAFQF 139
           E S  AV+ +NKF DLS  + ++  TGL  +          ++P + +   T++  +F  
Sbjct: 3   ERSSNAVYGINKFSDLSKEEFVKYYTGLKRE----------ESPSNEDHKKTDLPESFNV 52

Query: 140 NSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +       P+ FDWR +GV+S +K Q  C  CWAFSA   VE++HAI+   L ++S Q 
Sbjct: 53  TA-------PDQFDWRKKGVVSSIKNQKHCGSCWAFSAAANVESIHAIKTGKLIDVSEQQ 105


>gi|5823018|gb|AAD53011.1|AF089848_1 senescence-specific cysteine protease [Brassica napus]
          Length = 346

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 147/290 (50%), Gaps = 33/290 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG-TAVFGVNKFFDLSESDLQQL-TGLN 257
           H + Y+ + +   R+  F  NVE+ E   +  +G T    VN+F DL+  + + + TG  
Sbjct: 45  HGRTYADMNEKNNRYVVFKRNVERIERLNNVPAGRTFKLAVNQFADLTNDEFRFMYTGYK 104

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            D  L          FS +QT +   +F++ ++  G  LP A DWR +G ++ +K QG C
Sbjct: 105 GDFVL----------FSQSQTKST--SFRYQNVFFGA-LPIAVDWRKKGAVTPIKNQGSC 151

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
            CCWAFSAV  +E    I+   L  LS QQLVDCD ++ GC+GG MD A ++I+  GG+ 
Sbjct: 152 GCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTNDFGCSGGLMDTAFEHIMATGGLT 211

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++  YPYK  ++   C +   +     +  Y  +P  +E  + K VA + P+SVG+   G
Sbjct: 212 TESNYPYKGEDAN--CKIKSTKPSAASITGYEDVPVNDENALMKAVAHQ-PVSVGIEGGG 268

Query: 438 L---FYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGE 472
               FY SG             V  +          YWI+KNSWG+ WGE
Sbjct: 269 FDFQFYSSGVFTGECTTYLDHAVTAVGYSQSSAGSKYWIIKNSWGTKWGE 318



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 13/163 (7%)

Query: 491 TGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           T +   KL  L+ ++LVDCD ++ GC+GG MD A ++I+  GG+ ++  YPYK  ++   
Sbjct: 167 TQIKKGKLISLSEQQLVDCDTNDFGCSGGLMDTAFEHIMATGGLTTESNYPYKGEDAN-- 224

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
           C +   +     +  Y  +P  +E  + K VA + P+SVG+   G    +YS GV     
Sbjct: 225 CKIKSTKPSAASITGYEDVPVNDENALMKAVAHQ-PVSVGIEGGGFDFQFYSSGVFTGE- 282

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C     +HA+  VGY +          YWI+KNSWG+ WGE
Sbjct: 283 --CTTYL-DHAVTAVGYSQSSAGS----KYWIIKNSWGTKWGE 318



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 33/200 (16%)

Query: 13  GLGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLN-----------FMRDHDKVYSSVED 61
            L ++  F+I V+L+ S  F T       ++R L+           +M +H + Y+ + +
Sbjct: 2   ALEHIKIFLI-VSLVSSFCFST------TLSRLLDDELIMQKKHDEWMAEHGRTYADMNE 54

Query: 62  LLRRHENFVTNVEKAEDYQREDSG-TAVFEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQP 119
              R+  F  NVE+ E      +G T    VN+F DL++ + + + TG   D  L     
Sbjct: 55  KNNRYVVFKRNVERIERLNNVPAGRTFKLAVNQFADLTNDEFRFMYTGYKGDFVL----- 109

Query: 120 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 179
                FS +QT +   +F++ ++  G  LP A DWR +G ++ +K QG C CCWAFSAV 
Sbjct: 110 -----FSQSQTKST--SFRYQNVFFGA-LPIAVDWRKKGAVTPIKNQGSCGCCWAFSAVA 161

Query: 180 VVEAMHAIQGNNLTELSVQH 199
            +E    I+   L  LS Q 
Sbjct: 162 AIEGATQIKKGKLISLSEQQ 181


>gi|89274062|dbj|BAE80740.1| cysteine proteinase [Platycodon grandiflorus]
          Length = 462

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 37/289 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTGLNL 258
           H K Y+++ +  +R + F  N+   +++ +E++ +   G+N+F DL+  + +    G   
Sbjct: 57  HGKSYNALGEKEKRFQIFKDNLRFIDEHNAEENLSYKVGLNRFADLTNEEYRSTYLGAKS 116

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
              L  ++    AP                  R GD LPE+ DWRA+G ++ +K+QG C 
Sbjct: 117 KPKLSKVKSDRYAP------------------RVGDSLPESVDWRAKGAVAPIKDQGSCG 158

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVV 377
            CWAFS V  VE ++ I    L  LS Q+LVDCD S N GC+GG MD   ++II+NGG+ 
Sbjct: 159 SCWAFSTVNAVEGINQIVTGELITLSEQELVDCDKSYNEGCDGGLMDYGFEFIINNGGID 218

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +D+ YPY   ++   C    +    V +  Y  +P   EE +KK VA++ P+SVG+   G
Sbjct: 219 TDKDYPYLGRDAR--CDQYRKNAKVVTIDSYEDVPVNNEEALKKAVASQ-PVSVGIEGGG 275

Query: 438 --LFYYSGGVID----------LNQRLYGT--SIPYWIVKNSWGSDWGE 472
               +Y  G+            +N   YGT     YWIV+NSWGS WGE
Sbjct: 276 RAFQFYDSGIFTGKCGTALDHGVNVVGYGTEKGKDYWIVRNSWGSSWGE 324



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  +L  L+ ++LVDCD S N GC+GG MD   ++II+NGG+ +D+ YPY   ++   C
Sbjct: 175 IVTGELITLSEQELVDCDKSYNEGCDGGLMDYGFEFIINNGGIDTDKDYPYLGRDAR--C 232

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
               +    V +  Y  +P   EE +KK VA++ P+SVG+   G    +Y  G+      
Sbjct: 233 DQYRKNAKVVTIDSYEDVPVNNEEALKKAVASQ-PVSVGIEGGGRAFQFYDSGIF---TG 288

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H + +VGYG E+ KD     YWIV+NSWGS WGE
Sbjct: 289 KCG-TALDHGVNVVGYGTEKGKD-----YWIVRNSWGSSWGE 324



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 19/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++  H K Y+++ +  +R + F  N+   +++  E++ +    +N+F DL++ + + 
Sbjct: 50  YESWLVKHGKSYNALGEKEKRFQIFKDNLRFIDEHNAEENLSYKVGLNRFADLTNEEYRS 109

Query: 105 -LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
              G      L  ++    AP                  R GD LPE+ DWRA+G ++ +
Sbjct: 110 TYLGAKSKPKLSKVKSDRYAP------------------RVGDSLPESVDWRAKGAVAPI 151

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS V  VE ++ I    L  LS Q
Sbjct: 152 KDQGSCGSCWAFSTVNAVEGINQIVTGELITLSEQ 186


>gi|400180379|gb|AFP73328.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GC+GG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GC+GG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCDGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    + +  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVITMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|332326587|gb|AEE42617.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 169/342 (49%), Gaps = 46/342 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ LT LS QQLV CD  + GCNGG M  A ++++   NG ++
Sbjct: 150 CWAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCNGGLMTQAFEWLLRNMNGTML 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +S  +   C    +     ++  Y  I    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIE-SSETVMAAWLAKSGPISIAVDAS 268

Query: 437 GLFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK  V   +G + 
Sbjct: 269 SFMSYESGVLTSCAGDALNHGVLLVGYNXTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM 511
               +  ++  +P  L+             R+  E+++  DM
Sbjct: 329 CLLTEYPVSAHVPQSLAPGPSTESEERAPKRVMVEQVICTDM 370



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 87/159 (54%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L+ L+ ++LV CD  + GCNGG M  A ++++ N  G ++++ +YPY +S  +   C  
Sbjct: 169 RLTALSEQQLVSCDDKDSGCNGGLMTQAFEWLLRNMNGTMLTEDSYPYVSSTGDVPECTN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             +     ++  Y  I    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSQLVPGARIDGYVTIE-SSETVMAAWLAKSGPISIAVDASSFMSYESGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            A NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 DALNHGVLLVGYNXTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ LT LS Q 
Sbjct: 134 EKGAVTPVKDQGACGSCWAFSAVGNIESQWAVAGHRLTALSEQQ 177


>gi|414588010|tpg|DAA38581.1| TPA: hypothetical protein ZEAMMB73_156486 [Zea mays]
          Length = 347

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 167/331 (50%), Gaps = 52/331 (15%)

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQH------HDKVYSSVEDLLRRHENFVTNVE 222
           C  C   +AV    A   + G++   +  +H      H +VY    D   R   F  NV+
Sbjct: 14  CGVCLCSAAV---LAARELGGDDELAMVARHEQWMVQHGRVYKDETDKAHRFLVFKANVK 70

Query: 223 KAEDYQSEDS-GTAVF--GVNKFFDLSESDLQQLTGLNLDSTLEDIQPSL-QAPFSSNQT 278
             E + +  + G   F  GVN+F DL+  + +         T +   P++ + P      
Sbjct: 71  FIESFNAAAAAGNRKFWLGVNQFADLTNDEFRAT------KTNKGFNPNVVKVP------ 118

Query: 279 DTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGN 338
                 F++ +L   D LP+  DWR +G ++ +K+QG+C CCWAFSAV   E +  I   
Sbjct: 119 ----TGFRYQNLSI-DALPQTVDWRTKGAVTPIKDQGQCGCCWAFSAVAATEGIVKISTG 173

Query: 339 SLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 396
            LT LS Q+LVDCD+   + GCNGG MDDA ++II NGG+ ++  YPY A + +  C  G
Sbjct: 174 KLTSLSEQELVDCDVHGEDQGCNGGEMDDAFKFIIKNGGLTTESNYPYTAQDGQ--CKSG 231

Query: 397 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVI------DL 448
                   +K Y  +P  +E  + K VA++ P+SV ++   +   +YSGGV+      DL
Sbjct: 232 SNGA--ATIKGYEDVPANDEAALMKAVASQ-PVSVAVDGGDMTFQFYSGGVMTGSCGTDL 288

Query: 449 NQRL----YGTS---IPYWIVKNSWGSDWGE 472
           +  +    YG +     YW++KNSWG+ WGE
Sbjct: 289 DHGIAAIGYGKTSDGTKYWLMKNSWGTTWGE 319



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL+ L+ ++LVDCD+   + GCNGG MDDA ++II NGG+ ++  YPY A + +  C  G
Sbjct: 174 KLTSLSEQELVDCDVHGEDQGCNGGEMDDAFKFIIKNGGLTTESNYPYTAQDGQ--CKSG 231

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P  +E  + K VA++ P+SV ++   +   +YSGGV+  +   C 
Sbjct: 232 SNGA--ATIKGYEDVPANDEAALMKAVASQ-PVSVAVDGGDMTFQFYSGGVMTGS---CG 285

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H +  +GYG+    DGT   YW++KNSWG+ WGE   L
Sbjct: 286 TDL-DHGIAAIGYGKTS--DGTK--YWLMKNSWGTTWGENGFL 323



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 21/161 (13%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS-GTAVF--EVNKFFDLS 98
           V R   +M  H +VY    D   R   F  NV+  E +    + G   F   VN+F DL+
Sbjct: 38  VARHEQWMVQHGRVYKDETDKAHRFLVFKANVKFIESFNAAAAAGNRKFWLGVNQFADLT 97

Query: 99  DSDLQQLTGLNLDSTLEDIQPSL-QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           + + +         T +   P++ + P            F++ +L   D LP+  DWR +
Sbjct: 98  NDEFRAT------KTNKGFNPNVVKVP----------TGFRYQNLSI-DALPQTVDWRTK 140

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G ++ +K+QG+C CCWAFSAV   E +  I    LT LS Q
Sbjct: 141 GAVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLTSLSEQ 181


>gi|168017893|ref|XP_001761481.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687165|gb|EDQ73549.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 471

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 157/301 (52%), Gaps = 52/301 (17%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ H +VY S+ +  RR + F  N+    ++  ++  +   G+NKF DL+  + + L   
Sbjct: 56  LERHSRVYHSLSEKQRRFQIFKDNLHYIHNHNKQEK-SYWLGLNKFSDLTHDEFRAL--- 111

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL-------PEAFDWRAEGVIS 309
                   I+P+ +A                + LR+GD          E  DWR +G +S
Sbjct: 112 -----YLGIRPAGRA----------------HGLRNGDRFIYEDVVAEEMVDWRKKGAVS 150

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQ 368
            VK+QG C  CWAFSA+G VE ++AI    L  LS Q+LVDCD   N GCNGG MD A  
Sbjct: 151 DVKDQGSCGSCWAFSAIGSVEGVNAIVTGELISLSEQELVDCDRGQNQGCNGGLMDYAFD 210

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKV-KEYSRIPYGEEEEMKKWVATRG 427
           +II NGG+ +++ YPYKA++ +  C    +E  KV V  +Y  +P   E  + K V ++ 
Sbjct: 211 FIIKNGGIDTEEDYPYKATDGQ--CDEARKETSKVVVIDDYQDVPTKSESSLLKAV-SKN 267

Query: 428 PLSVGMNANG--LFYYSGGVI------DLNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           P+SV + A G    +Y GGV       DL+  +    YGT    + YWIVKNSWG  WGE
Sbjct: 268 PVSVAIEAGGRDFQHYQGGVFTGPCGTDLDHGVLAVGYGTDDDGVNYWIVKNSWGPSWGE 327

Query: 473 K 473
           K
Sbjct: 328 K 328



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 96/167 (57%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  +L  L+ ++LVDCD   N GCNGG MD A  +II NGG+ +++ YPYKA++ +
Sbjct: 173 VNAIVTGELISLSEQELVDCDRGQNQGCNGGLMDYAFDFIIKNGGIDTEEDYPYKATDGQ 232

Query: 549 RGCLVGEEEGFKVKV-KEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
             C    +E  KV V  +Y  +P   E  + K V ++ P+SV + A G    +Y GGV  
Sbjct: 233 --CDEARKETSKVVVIDDYQDVPTKSESSLLKAV-SKNPVSVAIEAGGRDFQHYQGGVF- 288

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C     +H ++ VGYG ++  DG  + YWIVKNSWG  WGEK
Sbjct: 289 --TGPCGTDL-DHGVLAVGYGTDD--DG--VNYWIVKNSWGPSWGEK 328



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 32/161 (19%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  ++  H +VY S+ +  RR + F  N+    ++ +++  +    +NKF DL+  + + 
Sbjct: 52  FHQWLERHSRVYHSLSEKQRRFQIFKDNLHYIHNHNKQEK-SYWLGLNKFSDLTHDEFRA 110

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL-------PEAFDWRAE 157
           L           I+P+ +A                + LR+GD          E  DWR +
Sbjct: 111 L--------YLGIRPAGRA----------------HGLRNGDRFIYEDVVAEEMVDWRKK 146

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G +S VK+QG C  CWAFSA+G VE ++AI    L  LS Q
Sbjct: 147 GAVSDVKDQGSCGSCWAFSAIGSVEGVNAIVTGELISLSEQ 187


>gi|351629613|gb|AEQ54770.1| cysteine proteinase CP1 [Coffea canephora]
          Length = 397

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 43/306 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V+ ++K YS+ E+ + R   F  N+ KA ++Q+ D  +A+ GV +F DL+E + +  T +
Sbjct: 78  VEEYEKTYSTHEEYVHRLGIFAKNLIKAAEHQAMDP-SAIHGVTQFSDLTEEEFEA-TYM 135

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L         +       +++  E+       +    DLPE+FDWR +G +++VK QG+
Sbjct: 136 GLKGGAGVGGTTQLGKDDGDESAAEV-------MMDVSDLPESFDWREKGAVTEVKTQGR 188

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDAL 367
           C  CWAFS  G +E  + I    L  LS QQLVDCD           + GC+GG M  A 
Sbjct: 189 CGSCWAFSTTGAIEGANFIATGKLLSLSEQQLVDCDHMCDLKEKDDCDDGCSGGLMTTAF 248

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
            Y+I+ GG+  +  YPY     +RG      E   VKV+ +++IP  +E ++   V   G
Sbjct: 249 NYLIEAGGIEEEVTYPYTG---KRGECKFNPEKVAVKVRNFAKIPE-DESQIAANVVHNG 304

Query: 428 PLSVGMNANGLFYYSGGV----IDLNQRL--------YGT---SI------PYWIVKNSW 466
           PL++G+NA  +  Y GGV    I   +R+        YG+   SI      PYWI+KNSW
Sbjct: 305 PLAIGLNAVFMQTYIGGVSCPLICDKKRINHGVLLVGYGSRGFSILRLGYKPYWIIKNSW 364

Query: 467 GSDWGE 472
           G  WGE
Sbjct: 365 GKRWGE 370



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 92/174 (52%), Gaps = 25/174 (14%)

Query: 493 VLPSKLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 543
           +   KL  L+ ++LVDCD           + GC+GG M  A  Y+I+ GG+  +  YPY 
Sbjct: 207 IATGKLLSLSEQQLVDCDHMCDLKEKDDCDDGCSGGLMTTAFNYLIEAGGIEEEVTYPYT 266

Query: 544 ASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV 603
               +RG      E   VKV+ +++IP  +E ++   V   GPL++G+NA  +  Y GGV
Sbjct: 267 G---KRGECKFNPEKVAVKVRNFAKIPE-DESQIAANVVHNGPLAIGLNAVFMQTYIGGV 322

Query: 604 IDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGE 651
                 +C+ K  NH +++VGYG      G SI      PYWI+KNSWG  WGE
Sbjct: 323 S--CPLICDKKRINHGVLLVGYGSR----GFSILRLGYKPYWIIKNSWGKRWGE 370



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 9/155 (5%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F +F+ +++K YS+ E+ + R   F  N+ KA ++Q  D  +A+  V +F DL++ + +
Sbjct: 73  HFKSFVEEYEKTYSTHEEYVHRLGIFAKNLIKAAEHQAMDP-SAIHGVTQFSDLTEEEFE 131

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             T + L         +       +++  E+       +    DLPE+FDWR +G +++V
Sbjct: 132 A-TYMGLKGGAGVGGTTQLGKDDGDESAAEV-------MMDVSDLPESFDWREKGAVTEV 183

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG+C  CWAFS  G +E  + I    L  LS Q
Sbjct: 184 KTQGRCGSCWAFSTTGAIEGANFIATGKLLSLSEQ 218


>gi|449449489|ref|XP_004142497.1| PREDICTED: cysteine proteinase 15A-like [Cucumis sativus]
          Length = 406

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 152/308 (49%), Gaps = 48/308 (15%)

Query: 195 LSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLT 254
           + ++ + K Y + ++ L R   FV N+ +A ++Q+ D  TAV GV +F DLSE + +++ 
Sbjct: 91  MFMEKYGKSYPTRKEYLHRFGIFVKNLIRAAEHQALDP-TAVHGVTQFSDLSEEEFERMF 149

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
                    +  P +         + +              LPE FDWR +G +++VK Q
Sbjct: 150 MGVRGGAGGEGLPEMNQAVEVTAEEVK-------------GLPERFDWRDKGAVTEVKMQ 196

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMDD 365
           G C  CWAFS  G VE  + I   +L  LS QQLVDCD +         N GCNGG M +
Sbjct: 197 GTCGSCWAFSTCGAVEGANFIATGNLLNLSEQQLVDCDHTCDPTDKTACNNGCNGGLMTN 256

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
           A +Y+I +GG+  + +YPY     +  C   + +   VKV  ++ IP  +E ++   +  
Sbjct: 257 AYKYLIQSGGLEEESSYPYTGRSGQ--CNF-QSDKIAVKVSNFTTIPI-DENQIAAHLVR 312

Query: 426 RGPLSVGMNANGLFYYSGGV---IDLNQRL---------YG---------TSIPYWIVKN 464
            GPL+VG+NA  +  Y GGV   +   +R          YG           +PYW++KN
Sbjct: 313 SGPLAVGLNAVFMQTYIGGVSCPLICGKRFVNHGVLMVGYGDEGFSILRFRKLPYWVIKN 372

Query: 465 SWGSDWGE 472
           SWG  WGE
Sbjct: 373 SWGERWGE 380



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 93/169 (55%), Gaps = 25/169 (14%)

Query: 498 LSRLATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           L  L+ ++LVDCD +         N GCNGG M +A +Y+I +GG+  + +YPY     +
Sbjct: 222 LLNLSEQQLVDCDHTCDPTDKTACNNGCNGGLMTNAYKYLIQSGGLEEESSYPYTGRSGQ 281

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
             C   + +   VKV  ++ IP  +E ++   +   GPL+VG+NA  +  Y GGV     
Sbjct: 282 --CNF-QSDKIAVKVSNFTTIPI-DENQIAAHLVRSGPLAVGLNAVFMQTYIGGVS--CP 335

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGE 651
            +C  +  NH +++VGYG+E    G SI      PYW++KNSWG  WGE
Sbjct: 336 LICGKRFVNHGVLMVGYGDE----GFSILRFRKLPYWVIKNSWGERWGE 380



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 14/156 (8%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F+ FM  + K Y + ++ L R   FV N+ +A ++Q  D  TAV  V +F DLS+ + +
Sbjct: 88  KFVMFMEKYGKSYPTRKEYLHRFGIFVKNLIRAAEHQALDP-TAVHGVTQFSDLSEEEFE 146

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           ++          +  P +         + +              LPE FDWR +G +++V
Sbjct: 147 RMFMGVRGGAGGEGLPEMNQAVEVTAEEVK-------------GLPERFDWRDKGAVTEV 193

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CWAFS  G VE  + I   NL  LS Q 
Sbjct: 194 KMQGTCGSCWAFSTCGAVEGANFIATGNLLNLSEQQ 229


>gi|400180363|gb|AFP73320.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS    TE++    N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSS----TELK---INDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS  
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSS-- 117

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
             TE++    N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 118 --TELK---INDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|242032709|ref|XP_002463749.1| hypothetical protein SORBIDRAFT_01g005350 [Sorghum bicolor]
 gi|241917603|gb|EER90747.1| hypothetical protein SORBIDRAFT_01g005350 [Sorghum bicolor]
          Length = 381

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 146/292 (50%), Gaps = 28/292 (9%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVFGVNKFFDLSESDLQQLTGL 256
           Q H +V+    +  RR   F  NV     +    D  +    +N+F D+   + +     
Sbjct: 50  QTHHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPSYRLRLNRFGDMGPEEFRSTFA- 108

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
             DS + D++   +    S+   T +  F ++      D+P + DWR  G ++ VK QG+
Sbjct: 109 --DSRINDLRRYRE----SSPAATAVPGFMYDD---ATDVPRSVDWRQHGAVTAVKNQGR 159

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS V  VE ++AI+  SL  LS Q+LVDCD +  GC GG M++A  +I   GG+
Sbjct: 160 CGSCWAFSTVVAVEGINAIRTGSLVSLSEQELVDCDTAENGCQGGLMENAFDFIKSYGGI 219

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++ AYPY+AS      +        V +  +  +P G E+ + K VA R P+SV ++A 
Sbjct: 220 TTESAYPYRASNGTCDGMRARRGRVHVSIDGHQMVPTGSEDALAKAVA-RQPVSVAIDAG 278

Query: 437 G--LFYYSGGVI------DLNQRL----YGTS----IPYWIVKNSWGSDWGE 472
           G    +YS GV       DL+  +    YG S     PYWIVKNSWG  WGE
Sbjct: 279 GQAFQFYSEGVFTGDCGTDLDHGVAVVGYGVSDVDGTPYWIVKNSWGPSWGE 330



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 14/166 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  +    L  L+ ++LVDCD +  GC GG M++A  +I   GG+ ++ AYPY+AS    
Sbjct: 175 INAIRTGSLVSLSEQELVDCDTAENGCQGGLMENAFDFIKSYGGITTESAYPYRASNGTC 234

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI--D 605
             +        V +  +  +P G E+ + K VA R P+SV ++A G    +YS GV   D
Sbjct: 235 DGMRARRGRVHVSIDGHQMVPTGSEDALAKAVA-RQPVSVAIDAGGQAFQFYSEGVFTGD 293

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               L      +H + +VGYG  +  DGT  PYWIVKNSWG  WGE
Sbjct: 294 CGTDL------DHGVAVVGYGVSD-VDGT--PYWIVKNSWGPSWGE 330



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDY-QREDSGTAVFEVNKFFDLSDSDLQQLTGLNL 110
           H +V+    +  RR   F  NV     + +R D  +    +N+F D+   + +       
Sbjct: 52  HHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPSYRLRLNRFGDMGPEEFRSTFA--- 108

Query: 111 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 170
           DS + D++   +    S+   T +  F ++      D+P + DWR  G ++ VK QG+C 
Sbjct: 109 DSRINDLRRYRE----SSPAATAVPGFMYDD---ATDVPRSVDWRQHGAVTAVKNQGRCG 161

Query: 171 CCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            CWAFS V  VE ++AI+  +L  LS Q
Sbjct: 162 SCWAFSTVVAVEGINAIRTGSLVSLSEQ 189


>gi|226495425|ref|NP_001148706.1| cysteine protease 1 precursor [Zea mays]
 gi|195621544|gb|ACG32602.1| cysteine protease 1 precursor [Zea mays]
          Length = 463

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 157/291 (53%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H + Y++V +  RR++ F  N+   + + +  D+G   F  G+N+F DL+ +D  + T L
Sbjct: 48  HGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLT-NDEYRATYL 106

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T    +  L A +  +  D E             DLPE+ DWRA+G +++VK+QG 
Sbjct: 107 GA-RTRPQRERKLGARY--HAADNE-------------DLPESVDWRAKGAVAEVKDQGS 150

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+NGG
Sbjct: 151 CGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGG 210

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + +++ YPYK ++    C V  +    V +  Y  +P  +E+ ++K VA + P+SV + A
Sbjct: 211 IDTEKDYPYKGTDGR--CDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQ-PVSVAIEA 267

Query: 436 NGLFY--YSGGVID----------LNQRLYGT--SIPYWIVKNSWGSDWGE 472
            G  +  YS G+            +    YGT     YWIVKNSWGS WGE
Sbjct: 268 AGTAFQLYSSGIFTGSCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGE 318



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 95/162 (58%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +++ YPYK ++    C
Sbjct: 169 IVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEKDYPYKGTDGR--C 226

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
            V  +    V +  Y  +P  +E+ ++K VA + P+SV + A G  +  YS G+   +  
Sbjct: 227 DVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQ-PVSVAIEAAGTAFQLYSSGIFTGS-- 283

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YWIVKNSWGS WGE
Sbjct: 284 -CG-TALDHGVTAVGYGTENGKD-----YWIVKNSWGSSWGE 318



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 26/160 (16%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +M  H + Y++V +  RR++ F  N+   + +    D+G   F +  N+F DL++ +
Sbjct: 41  YAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLTNDE 100

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG---DDLPEAFDWRAEG 158
            +                   A +   +T  + R  +  +  H    +DLPE+ DWRA+G
Sbjct: 101 YR-------------------ATYLGARTRPQ-RERKLGARYHAADNEDLPESVDWRAKG 140

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +++VK+QG C  CWAFS +  VE ++ I   +L  LS Q
Sbjct: 141 AVAEVKDQGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQ 180


>gi|414585111|tpg|DAA35682.1| TPA: cysteine proteinase Mir3 [Zea mays]
          Length = 468

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 157/291 (53%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H + Y++V +  RR++ F  N+   + + +  D+G   F  G+N+F DL+ +D  + T L
Sbjct: 53  HGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLT-NDEYRATYL 111

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T    +  L A +  +  D E             DLPE+ DWRA+G +++VK+QG 
Sbjct: 112 GA-RTRPQRERKLGARY--HAADNE-------------DLPESVDWRAKGAVAEVKDQGS 155

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+NGG
Sbjct: 156 CGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGG 215

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + +++ YPYK ++    C V  +    V +  Y  +P  +E+ ++K VA + P+SV + A
Sbjct: 216 IDTEKDYPYKGTDGR--CDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQ-PVSVAIEA 272

Query: 436 NGLFY--YSGGVID----------LNQRLYGT--SIPYWIVKNSWGSDWGE 472
            G  +  YS G+            +    YGT     YWIVKNSWGS WGE
Sbjct: 273 AGTAFQLYSSGIFTGSCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGE 323



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 95/162 (58%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +++ YPYK ++    C
Sbjct: 174 IVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEKDYPYKGTDGR--C 231

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
            V  +    V +  Y  +P  +E+ ++K VA + P+SV + A G  +  YS G+   +  
Sbjct: 232 DVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQ-PVSVAIEAAGTAFQLYSSGIFTGS-- 288

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YWIVKNSWGS WGE
Sbjct: 289 -CG-TALDHGVTAVGYGTENGKD-----YWIVKNSWGSSWGE 323



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 26/160 (16%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +M  H + Y++V +  RR++ F  N+   + +    D+G   F +  N+F DL++ +
Sbjct: 46  YAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLTNDE 105

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG---DDLPEAFDWRAEG 158
            +                   A +   +T  + R  +  +  H    +DLPE+ DWRA+G
Sbjct: 106 YR-------------------ATYLGARTRPQ-RERKLGARYHAADNEDLPESVDWRAKG 145

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +++VK+QG C  CWAFS +  VE ++ I   +L  LS Q
Sbjct: 146 AVAEVKDQGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQ 185


>gi|449487301|ref|XP_004157559.1| PREDICTED: cysteine proteinase 15A-like [Cucumis sativus]
          Length = 406

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 155/308 (50%), Gaps = 48/308 (15%)

Query: 195 LSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLT 254
           + ++ + K Y + ++ L R   FV N+ +A ++Q+ D  TAV GV +F DLSE + +++ 
Sbjct: 91  MFMEKYGKSYPTRKEYLHRFGIFVKNLIRAAEHQALDP-TAVHGVTQFSDLSEEEFERMF 149

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
                    +  P +    +   T  E++            LPE FDWR +G +++VK Q
Sbjct: 150 MGVRGGAGGEGLPEMNQ--AVEVTAEEVKG-----------LPERFDWRDKGAVTEVKMQ 196

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMDD 365
           G C  CWAFS  G VE  + I   +L  LS QQLVDCD +         N GCNGG M +
Sbjct: 197 GTCGSCWAFSTCGAVEGANFIATGNLLNLSEQQLVDCDHTCDPTDKTACNNGCNGGLMTN 256

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
           A +Y+I +GG+  + +YPY     +  C   + +   VKV  ++ IP  +E ++   +  
Sbjct: 257 AYKYLIQSGGLEEESSYPYTGRSGQ--CNF-QSDKIAVKVSNFTTIPI-DENQIAAHLVR 312

Query: 426 RGPLSVGMNANGLFYYSGGV---IDLNQRL---------YG---------TSIPYWIVKN 464
            GPL+VG+NA  +  Y GGV   +   +R          YG           +PYW++KN
Sbjct: 313 SGPLAVGLNAVFMQTYIGGVSCPLICGKRFVNHGVLMVGYGDEGFSILRFRKLPYWVIKN 372

Query: 465 SWGSDWGE 472
           SWG  WGE
Sbjct: 373 SWGERWGE 380



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 93/169 (55%), Gaps = 25/169 (14%)

Query: 498 LSRLATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           L  L+ ++LVDCD +         N GCNGG M +A +Y+I +GG+  + +YPY     +
Sbjct: 222 LLNLSEQQLVDCDHTCDPTDKTACNNGCNGGLMTNAYKYLIQSGGLEEESSYPYTGRSGQ 281

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
             C   + +   VKV  ++ IP  +E ++   +   GPL+VG+NA  +  Y GGV     
Sbjct: 282 --CNF-QSDKIAVKVSNFTTIPI-DENQIAAHLVRSGPLAVGLNAVFMQTYIGGVS--CP 335

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGE 651
            +C  +  NH +++VGYG+E    G SI      PYW++KNSWG  WGE
Sbjct: 336 LICGKRFVNHGVLMVGYGDE----GFSILRFRKLPYWVIKNSWGERWGE 380



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 14/156 (8%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F+ FM  + K Y + ++ L R   FV N+ +A ++Q  D  TAV  V +F DLS+ + +
Sbjct: 88  KFVMFMEKYGKSYPTRKEYLHRFGIFVKNLIRAAEHQALDP-TAVHGVTQFSDLSEEEFE 146

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           ++          +  P +    +   T  E++            LPE FDWR +G +++V
Sbjct: 147 RMFMGVRGGAGGEGLPEMNQ--AVEVTAEEVKG-----------LPERFDWRDKGAVTEV 193

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CWAFS  G VE  + I   NL  LS Q 
Sbjct: 194 KMQGTCGSCWAFSTCGAVEGANFIATGNLLNLSEQQ 229


>gi|57282619|emb|CAE54307.1| cysteine proteinase [Gossypium hirsutum]
          Length = 372

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 152/298 (51%), Gaps = 45/298 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  H K Y+ + +  +R E F  N+   +++ S ++ T   G+NKF DL+  + +     
Sbjct: 50  VIQHGKAYNGIGEEEKRFEIFKDNLRFIDEHNSNNNTTYKLGLNKFADLTNQEYR----- 104

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN------SLRHGDDLPEAFDWRAEGVISK 310
                         A F   +TD   R  +        + R GD+LP++ +WR  G +S+
Sbjct: 105 --------------AKFLGTRTDPRRRLMKSKIPSSRYAHRAGDNLPDSVNWRDHGAVSR 150

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK+QG C  CWAFSA+  VE ++ I    L  LS Q+LVDCD S + GCNGG MD A Q+
Sbjct: 151 VKDQGSCGSCWAFSAIAAVEGINKIVSGELISLSEQELVDCDRSYDAGCNGGLMDYAFQF 210

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           IIDNGG+ +++ YPY    ++  C   ++    V +  Y  +P   E  +KK VA + P+
Sbjct: 211 IIDNGGIDTEKDYPYLGFNNQ--CDPTKKNAKVVSIDGYEDVP-NNENALKKAVAHQ-PV 266

Query: 430 SVGMNANGLFY--YSGGVIDLNQRL----------YGT---SIPYWIVKNSWGSDWGE 472
           S+ + A G  +  Y  GV +    L          YG+      YWIV+NSWG +WGE
Sbjct: 267 SIAIEAGGRAFQLYESGVFNGECGLALDHGVVAVGYGSDDNGQDYWIVRNSWGGNWGE 324



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  +L  L+ ++LVDCD S + GCNGG MD A Q+IIDNGG+ +++ YPY    ++
Sbjct: 172 INKIVSGELISLSEQELVDCDRSYDAGCNGGLMDYAFQFIIDNGGIDTEKDYPYLGFNNQ 231

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C   ++    V +  Y  +P   E  +KK VA + P+S+ + A G  +  Y  GV + 
Sbjct: 232 --CDPTKKNAKVVSIDGYEDVP-NNENALKKAVAHQ-PVSIAIEAGGRAFQLYESGVFNG 287

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              L    A +H ++ VGYG     D     YWIV+NSWG +WGE
Sbjct: 288 ECGL----ALDHGVVAVGYG----SDDNGQDYWIVRNSWGGNWGE 324



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 25/153 (16%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLD 111
           H K Y+ + +  +R E F  N+   +++   ++ T    +NKF DL++ + +        
Sbjct: 53  HGKAYNGIGEEEKRFEIFKDNLRFIDEHNSNNNTTYKLGLNKFADLTNQEYR-------- 104

Query: 112 STLEDIQPSLQAPFSSNQTDTEMRAFQFN------SLRHGDDLPEAFDWRAEGVISKVKE 165
                      A F   +TD   R  +        + R GD+LP++ +WR  G +S+VK+
Sbjct: 105 -----------AKFLGTRTDPRRRLMKSKIPSSRYAHRAGDNLPDSVNWRDHGAVSRVKD 153

Query: 166 QGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           QG C  CWAFSA+  VE ++ I    L  LS Q
Sbjct: 154 QGSCGSCWAFSAIAAVEGINKIVSGELISLSEQ 186


>gi|242072394|ref|XP_002446133.1| hypothetical protein SORBIDRAFT_06g002160 [Sorghum bicolor]
 gi|241937316|gb|EES10461.1| hypothetical protein SORBIDRAFT_06g002160 [Sorghum bicolor]
          Length = 338

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 153/308 (49%), Gaps = 47/308 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + +VY    +  RR E F  NV   E + +        GVN+F DL+  + +   G    
Sbjct: 43  YGRVYKDAAEKARRFEAFKHNVAFVESFNTNKKNKFWLGVNQFADLTTEEFKANKGFK-- 100

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                       P S+    T    F++ +L     LP A DWR +G ++ +K QG+C C
Sbjct: 101 ------------PISAEMVPT--TGFKYENLSV-SALPTAVDWRTKGAVTPIKNQGQCGC 145

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVV 377
           CWAFSAV  +E +  +   +L  LS Q+LVDCD    + GC GG MD A +++I NGG+ 
Sbjct: 146 CWAFSAVAAMEGIVKLSTGNLISLSEQELVDCDTHSMDEGCEGGWMDSAFEFVIKNGGLA 205

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN- 436
           ++ +YPYKA + +  C  G +      +K +  +P  +E  + K VA + P+SV ++A+ 
Sbjct: 206 TESSYPYKAVDGK--CKGGSKSA--ATIKGHEDVPVNDEAALMKAVANQ-PVSVAVDASD 260

Query: 437 -GLFYYSGGVI------DLNQRL----YGT---SIPYWIVKNSWGSDWGEK--------V 474
                YSGGV+      +L+  +    YG       YWI+KNSWG+ WGEK        +
Sbjct: 261 RTFMLYSGGVMTGSCGTELDHGIAAIGYGVESDGTKYWILKNSWGTTWGEKGFLRMEKDI 320

Query: 475 EDKVGSSG 482
            DK G  G
Sbjct: 321 SDKQGMCG 328



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 94/162 (58%), Gaps = 17/162 (10%)

Query: 498 LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ ++LVDCD    + GC GG MD A +++I NGG+ ++ +YPYKA + +  C  G 
Sbjct: 166 LISLSEQELVDCDTHSMDEGCEGGWMDSAFEFVIKNGGLATESSYPYKAVDGK--CKGGS 223

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNP 613
           +      +K +  +P  +E  + K VA + P+SV ++A+      YSGGV+  +   C  
Sbjct: 224 KSA--ATIKGHEDVPVNDEAALMKAVANQ-PVSVAVDASDRTFMLYSGGVMTGS---CGT 277

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           +  +H +  +GYG E   DGT   YWI+KNSWG+ WGEK  L
Sbjct: 278 E-LDHGIAAIGYGVES--DGTK--YWILKNSWGTTWGEKGFL 314



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 18/179 (10%)

Query: 21  MIKVALLESNIFQTRGYLNSP-VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           ++  A L S++   R   ++  V R  N+M ++ +VY    +  RR E F  NV   E +
Sbjct: 11  ILGCASLCSSVLAARELSDAAMVERHENWMVEYGRVYKDAAEKARRFEAFKHNVAFVESF 70

Query: 80  QREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF 139
                      VN+F DL+  + +   G                P S+    T    F++
Sbjct: 71  NTNKKNKFWLGVNQFADLTTEEFKANKGFK--------------PISAEMVPT--TGFKY 114

Query: 140 NSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +L     LP A DWR +G ++ +K QG+C CCWAFSAV  +E +  +   NL  LS Q
Sbjct: 115 ENLSV-SALPTAVDWRTKGAVTPIKNQGQCGCCWAFSAVAAMEGIVKLSTGNLISLSEQ 172


>gi|115461667|ref|NP_001054433.1| Os05g0108600 [Oryza sativa Japonica Group]
 gi|14719319|gb|AAK73137.1|AC079022_10 putative cysteine proteinase [Oryza sativa]
 gi|33151125|gb|AAP97431.1| cysteine protease CP1 [Oryza sativa]
 gi|52353572|gb|AAU44138.1| cysteine proteinase CP1 [Oryza sativa Japonica Group]
 gi|113577984|dbj|BAF16347.1| Os05g0108600 [Oryza sativa Japonica Group]
 gi|125550541|gb|EAY96250.1| hypothetical protein OsI_18148 [Oryza sativa Indica Group]
          Length = 358

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/317 (35%), Positives = 166/317 (52%), Gaps = 36/317 (11%)

Query: 175 FSAVGVVEAMHAIQGNNLTELS---VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSED 231
           FS VG  E   A   + L EL    V  + K Y+S E+ +RR E F  N+   +D   + 
Sbjct: 31  FSIVGYSEEDLASH-DRLIELFEKWVAKYRKAYASFEEKVRRFEVFKDNLNHIDDINKKV 89

Query: 232 SGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 291
           + +   G+N+F DL+  + +        +T   + P    P  SN        F++  + 
Sbjct: 90  T-SYWLGLNEFADLTHDEFK--------ATYLGLTP---PPTRSNSKHYSSEEFRYGKMS 137

Query: 292 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC 351
           +G+ +P+  DWR +  +++VK QG+C  CWAFS V  VE ++AI   +LT LS Q+L+DC
Sbjct: 138 NGE-VPKEMDWRKKNAVTEVKNQGQCGSCWAFSTVAAVEGINAIVTGNLTSLSEQELIDC 196

Query: 352 DM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 410
               N GCNGG MD A  YI   GG+ +++AYPY   E +  C  G+     V +  Y  
Sbjct: 197 STDGNNGCNGGLMDYAFSYIASTGGLRTEEAYPYAMEEGD--CDEGKGAAV-VTISGYED 253

Query: 411 IPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID--LNQRL--------YGTSI- 457
           +P  +E+ + K +A + P+SV + A+G    +YSGGV D    ++L        YGTS  
Sbjct: 254 VPANDEQALVKALAHQ-PVSVAIEASGRHFQFYSGGVFDGPCGEQLDHGVTAVGYGTSKG 312

Query: 458 -PYWIVKNSWGSDWGEK 473
             Y IVKNSWG  WGEK
Sbjct: 313 QDYIIVKNSWGPHWGEK 329



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DC    N GCNGG MD A  YI   GG+ +++AYPY   E +
Sbjct: 177 INAIVTGNLTSLSEQELIDCSTDGNNGCNGGLMDYAFSYIASTGGLRTEEAYPYAMEEGD 236

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C  G+     V +  Y  +P  +E+ + K +A + P+SV + A+G    +YSGGV D 
Sbjct: 237 --CDEGKGAAV-VTISGYEDVPANDEQALVKALAHQ-PVSVAIEASGRHFQFYSGGVFD- 291

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  +  +H +  VGYG  + +D     Y IVKNSWG  WGEK
Sbjct: 292 --GPCGEQL-DHGVTAVGYGTSKGQD-----YIIVKNSWGPHWGEK 329



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 33/227 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  ++  + K Y+S E+ +RR E F  N+   +D  ++ + +    +N+F DL+  + + 
Sbjct: 51  FEKWVAKYRKAYASFEEKVRRFEVFKDNLNHIDDINKKVT-SYWLGLNEFADLTHDEFK- 108

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                  +T   + P    P  SN        F++  + +G+ +P+  DWR +  +++VK
Sbjct: 109 -------ATYLGLTP---PPTRSNSKHYSSEEFRYGKMSNGE-VPKEMDWRKKNAVTEVK 157

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH----------------HDKVYSSVE 208
            QG+C  CWAFS V  VE ++AI   NLT LS Q                  D  +S + 
Sbjct: 158 NQGQCGSCWAFSTVAAVEGINAIVTGNLTSLSEQELIDCSTDGNNGCNGGLMDYAFSYIA 217

Query: 209 DL--LRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
               LR  E +   +E+ +    E  G AV  ++ + D+  +D Q L
Sbjct: 218 STGGLRTEEAYPYAMEEGD--CDEGKGAAVVTISGYEDVPANDEQAL 262


>gi|400180443|gb|AFP73358.1| cysteine protease, partial [Solanum habrochaites]
          Length = 345

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDL-SESDLQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D+ SE  L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSEEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P  S +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMPSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 NQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     + +   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQGKTAAVQISNYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNA-NGLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A + L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASHDLQFYAGGTYDGSCANRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA-NGLFYYSGGVIDLNQRLC 611
             + +   V++  Y  +P GE   ++    T+ P+S+G+ A + L +Y+GG  D +   C
Sbjct: 226 RSQGKTAAVQISNYQVVPEGETSLLQ--AVTKQPVSIGIAASHDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ANRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 14/152 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLT 106
           +M  H +VY    +   R   F  N++  E   +  + +    +N+F D++  + L + T
Sbjct: 42  WMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSEEFLAKFT 101

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           GLN+ ++   + PS   P  S +       F+ N L   DD+P   DWR  G +++VK Q
Sbjct: 102 GLNIPNSY--LSPS---PMPSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVKNQ 148

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G+C CCWAFSAVG +E  + I   NL E S Q
Sbjct: 149 GQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQ 180


>gi|255563110|ref|XP_002522559.1| cysteine protease, putative [Ricinus communis]
 gi|223538250|gb|EEF39859.1| cysteine protease, putative [Ricinus communis]
          Length = 344

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 151/293 (51%), Gaps = 35/293 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + +VY    +  +R + F  NVE  E + +  +     G+N F DL+  + +     
Sbjct: 42  MTQYGRVYKGNVEKEKRFKIFKENVEFIESFNNNGNKPYKLGINAFTDLTNEEFRA---- 97

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                            SS+Q+    ++F++ ++     +P + DWR +G ++ +K+QG+
Sbjct: 98  --------SHNGYTMSMSSHQSSYRTKSFRYENVT---AVPPSLDWRTKGAVTHIKDQGQ 146

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV  +E +  +   +L  LS Q+LVDCD S  + GC GG MDDA ++II+N 
Sbjct: 147 CGCCWAFSAVAAMEGITKLSTGTLISLSEQELVDCDTSGMDQGCEGGLMDDAFEFIIENN 206

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPY+  +    C   +      K+  Y  +P  +EE ++K VA + P+SV ++
Sbjct: 207 GLTTEANYPYEGVDGS--CNTRKAANHAAKITGYENVPAYDEEALRKAVANQ-PVSVAID 263

Query: 435 A--NGLFYYSGGVI--DLNQRL--------YGTS---IPYWIVKNSWGSDWGE 472
           A  +   +YS G+   D    L        YGTS     YW+VKNSWG+ WGE
Sbjct: 264 AGESAFQHYSSGIFTGDCGTELDHGVTVVGYGTSDDGTKYWLVKNSWGTSWGE 316



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 19/168 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +    L  L+ ++LVDCD S  + GC GG MDDA ++II+N G+ ++  YPY+  + 
Sbjct: 162 ITKLSTGTLISLSEQELVDCDTSGMDQGCEGGLMDDAFEFIIENNGLTTEANYPYEGVDG 221

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI- 604
              C   +      K+  Y  +P  +EE ++K VA + P+SV ++A  +   +YS G+  
Sbjct: 222 S--CNTRKAANHAAKITGYENVPAYDEEALRKAVANQ-PVSVAIDAGESAFQHYSSGIFT 278

Query: 605 -DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            D    L      +H + +VGYG  +  DGT   YW+VKNSWG+ WGE
Sbjct: 279 GDCGTEL------DHGVTVVGYGTSD--DGTK--YWLVKNSWGTSWGE 316



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 20/187 (10%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNS-----PVTRFLNFMRDHDKVYSSVEDLLRRHENFVT 71
           LH  ++ +A+L   ++ ++ +  S        R   +M  + +VY    +  +R + F  
Sbjct: 5   LHNKLVLMAMLLVTLWASQSWSRSLHEASMELRHKTWMTQYGRVYKGNVEKEKRFKIFKE 64

Query: 72  NVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTD 131
           NVE  E +    +      +N F DL++ + +                      SS+Q+ 
Sbjct: 65  NVEFIESFNNNGNKPYKLGINAFTDLTNEEFRA------------SHNGYTMSMSSHQSS 112

Query: 132 TEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNN 191
              ++F++ ++     +P + DWR +G ++ +K+QG+C CCWAFSAV  +E +  +    
Sbjct: 113 YRTKSFRYENVT---AVPPSLDWRTKGAVTHIKDQGQCGCCWAFSAVAAMEGITKLSTGT 169

Query: 192 LTELSVQ 198
           L  LS Q
Sbjct: 170 LISLSEQ 176


>gi|302771610|ref|XP_002969223.1| hypothetical protein SELMODRAFT_91274 [Selaginella moellendorffii]
 gi|300162699|gb|EFJ29311.1| hypothetical protein SELMODRAFT_91274 [Selaginella moellendorffii]
          Length = 367

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 148/303 (48%), Gaps = 55/303 (18%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL-QQLTGLNLDS 260
           K Y++ E    R + F  N+ +A  +Q+ D  +AV G+ +F DL+E +  QQ  GL + S
Sbjct: 67  KAYATAEAYAHRLKVFEANLVRAVSHQALDP-SAVHGITQFSDLTEEEFKQQFLGLRVPS 125

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACC 320
            L +   +   P                     +DLPE FDWR  G +++VK QG C  C
Sbjct: 126 RLREANKAPVLP--------------------TNDLPEDFDWREHGAVTEVKNQGACGSC 165

Query: 321 WAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMDDALQYII 371
           WAFS  G +E  H ++   L  LS QQLVDCD S         + GCNGG M +A  Y++
Sbjct: 166 WAFSTTGAIEGAHFLETGKLISLSEQQLVDCDHSCDPTDKVSCDAGCNGGLMTNAYDYVM 225

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
            +GG+ ++  YPY  + + + C     +     V  +S +   +E+++   +   GPL++
Sbjct: 226 KSGGLETETDYPYTGNSNGK-CQFNANK-IVASVANFSTVSL-DEDQIAANLVKHGPLAI 282

Query: 432 GMNANGLFYYSGGV----------IDLNQRLYG-----------TSIPYWIVKNSWGSDW 470
           G+NA  +  Y GGV          ID    L G           T  PYWI+KNSWG+ W
Sbjct: 283 GINAVFMQTYIGGVSCPIICSKHHIDHGVLLVGYGAKGYAPIRFTEKPYWIIKNSWGATW 342

Query: 471 GEK 473
           GE+
Sbjct: 343 GEQ 345



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 16/167 (9%)

Query: 497 KLSRLATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD S         + GCNGG M +A  Y++ +GG+ ++  YPY  + +
Sbjct: 184 KLISLSEQQLVDCDHSCDPTDKVSCDAGCNGGLMTNAYDYVMKSGGLETETDYPYTGNSN 243

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
            + C     +     V  +S +   +E+++   +   GPL++G+NA  +  Y GGV    
Sbjct: 244 GK-CQFNANK-IVASVANFSTVSL-DEDQIAANLVKHGPLAIGINAVFMQTYIGGVS--C 298

Query: 608 QRLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGEK 652
             +C+    +H +++VGYG +       T  PYWI+KNSWG+ WGE+
Sbjct: 299 PIICSKHHIDHGVLLVGYGAKGYAPIRFTEKPYWIIKNSWGATWGEQ 345



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 22/157 (14%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           T F +F+    K Y++ E    R + F  N+ +A  +Q  D  +AV  + +F DL++ + 
Sbjct: 56  THFKSFIARFGKAYATAEAYAHRLKVFEANLVRAVSHQALDP-SAVHGITQFSDLTEEEF 114

Query: 103 -QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            QQ  GL + S L +   +   P                     +DLPE FDWR  G ++
Sbjct: 115 KQQFLGLRVPSRLREANKAPVLP--------------------TNDLPEDFDWREHGAVT 154

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +VK QG C  CWAFS  G +E  H ++   L  LS Q
Sbjct: 155 EVKNQGACGSCWAFSTTGAIEGAHFLETGKLISLSEQ 191


>gi|255539310|ref|XP_002510720.1| cysteine protease, putative [Ricinus communis]
 gi|223551421|gb|EEF52907.1| cysteine protease, putative [Ricinus communis]
          Length = 349

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 153/303 (50%), Gaps = 47/303 (15%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV----FGVNKFFDLS 246
           +L E  +    +VY S E+ L R E F  N+     +  +D+   V     G+N+F DLS
Sbjct: 45  DLFESWISRFGRVYESAEEKLERFEIFKDNL-----FHIDDTNKKVRNYWLGLNEFADLS 99

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
             + + +  GL       D+    Q P      D                +P++ DWR +
Sbjct: 100 HEEFKNKYLGLK-----PDLSKRAQCPEEFTYKDVA--------------IPKSVDWRKK 140

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMD 364
           G ++ VK QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD
Sbjct: 141 GAVTPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNNGCNGGLMD 200

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
            A  YI+ NGG+  ++ YPY   E    C + +EE   V +  Y  +P   EE + K +A
Sbjct: 201 YAFAYIVANGGLHKEEDYPYIMEEGT--CDMRKEESDAVTISGYHDVPQNSEESLLKALA 258

Query: 425 TRGPLSVGMNANG--LFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDW 470
            + PLS+ + A+G    +YSGGV D      L+  +    YGTS  + Y IVKNSWG  W
Sbjct: 259 NQ-PLSIAIEASGRDFQFYSGGVFDGHCGTELDHGVAAVGYGTSKGLDYIIVKNSWGPKW 317

Query: 471 GEK 473
           GEK
Sbjct: 318 GEK 320



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 92/163 (56%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  YI+ NGG+  ++ YPY   E    C
Sbjct: 170 IVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFAYIVANGGLHKEEDYPYIMEEGT--C 227

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +EE   V +  Y  +P   EE + K +A + PLS+ + A+G    +YSGGV D +  
Sbjct: 228 DMRKEESDAVTISGYHDVPQNSEESLLKALANQ-PLSIAIEASGRDFQFYSGGVFDGH-- 284

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG  +  D     Y IVKNSWG  WGEK
Sbjct: 285 -CGTEL-DHGVAAVGYGTSKGLD-----YIIVKNSWGPKWGEK 320



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 21/158 (13%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +  F +++    +VY S E+ L R E F  N+   +D  ++     +  +N+F DLS  +
Sbjct: 44  IDLFESWISRFGRVYESAEEKLERFEIFKDNLFHIDDTNKKVRNYWL-GLNEFADLSHEE 102

Query: 102 LQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            + +  GL       D+    Q P      D                +P++ DWR +G +
Sbjct: 103 FKNKYLGLK-----PDLSKRAQCPEEFTYKDVA--------------IPKSVDWRKKGAV 143

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           + VK QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 144 TPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 181


>gi|255646767|gb|ACU23856.1| unknown [Glycine max]
          Length = 350

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 157/298 (52%), Gaps = 39/298 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K+Y ++E+ L R E F  N+ K  D +++       G+++F DLS  +  
Sbjct: 47  LFESWMSRHGKIYENIEEKLLRFEIFKDNL-KHIDERNKVVSNYWLGLSEFADLSHREFN 105

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL +D +     P                 F +  +    +LP++ DWR +G ++ 
Sbjct: 106 NKYLGLKVDYSRRRESP---------------EEFTYKDV----ELPKSVDWRKKGAVAP 146

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  +
Sbjct: 147 VKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSF 206

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I++NGG+  ++ YPY   E    C + +EE   V +  Y  +P   E+ + K +A + PL
Sbjct: 207 IVENGGLHKEEDYPYIMEEG--ACEMTKEETQVVTISGYHDVPQNNEQSLLKALANQ-PL 263

Query: 430 SVGMNANG--LFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV       DL+  +    YGT+  + Y  VKNSWGS WGEK
Sbjct: 264 SVAIEASGRDFQFYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYITVKNSWGSKWGEK 321



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 92/163 (56%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  +I++NGG+  ++ YPY   E    C
Sbjct: 171 IVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSFIVENGGLHKEEDYPYIMEEG--AC 228

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +EE   V +  Y  +P   E+ + K +A + PLSV + A+G    +YSGGV D +  
Sbjct: 229 EMTKEETQVVTISGYHDVPQNNEQSLLKALANQ-PLSVAIEASGRDFQFYSGGVFDGH-- 285

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H +  VGYG  +  D     Y  VKNSWGS WGEK
Sbjct: 286 -CGSDL-DHGVAAVGYGTAKGVD-----YITVKNSWGSKWGEK 321



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 28/188 (14%)

Query: 19  TFMIKVALLESNIFQTRGY-------LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVT 71
           +F +  +L     F   GY       ++  +  F ++M  H K+Y ++E+ L R E F  
Sbjct: 15  SFCLFASLAFGRDFSIVGYSSEDLKSMDKLIELFESWMSRHGKIYENIEEKLLRFEIFKD 74

Query: 72  NVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQT 130
           N++  ++  +  S   +  +++F DLS  +   +  GL +D +     P           
Sbjct: 75  NLKHIDERNKVVSNYWL-GLSEFADLSHREFNNKYLGLKVDYSRRRESP----------- 122

Query: 131 DTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGN 190
                 F +  +    +LP++ DWR +G ++ VK QG C  CWAFS V  VE ++ I   
Sbjct: 123 ----EEFTYKDV----ELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEGINQIVTG 174

Query: 191 NLTELSVQ 198
           NLT LS Q
Sbjct: 175 NLTSLSEQ 182


>gi|255635584|gb|ACU18142.1| unknown [Glycine max]
          Length = 345

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 158/298 (53%), Gaps = 39/298 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K+Y S+E+ L R E F  N+ K  D +++       G+N+F DLS  + +
Sbjct: 46  LFESWMSKHGKIYQSIEEKLLRFEIFKDNL-KHIDERNKVVSNYWLGLNEFADLSHQEFK 104

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL +D +     P                 F +  +    +LP++ DWR +G ++ 
Sbjct: 105 NKYLGLKVDYSRRRESP---------------EEFTYKDV----ELPKSVDWRKKGAVAP 145

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + + GCNGG MD A  +
Sbjct: 146 VKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYSNGCNGGLMDYAFSF 205

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I++NGG+  ++ YPY   E    C + +EE   V +  Y  +P   E+ + K +A +  L
Sbjct: 206 IVENGGLHKEEDYPYIMEEGT--CEMTKEETEVVTISGYHDVPQNNEQSLLKALANQ-SL 262

Query: 430 SVGMNANG--LFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV       DL+  +    YGT+  + Y IVKNSWGS WGEK
Sbjct: 263 SVAIEASGRDFQFYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYIIVKNSWGSKWGEK 320



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + + GCNGG MD A  +I++NGG+  ++ YPY   E    C
Sbjct: 170 IVTGNLTSLSEQELIDCDRTYSNGCNGGLMDYAFSFIVENGGLHKEEDYPYIMEEGT--C 227

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +EE   V +  Y  +P   E+ + K +A +  LSV + A+G    +YSGGV D +  
Sbjct: 228 EMTKEETEVVTISGYHDVPQNNEQSLLKALANQ-SLSVAIEASGRDFQFYSGGVFDGH-- 284

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H +  VGYG  +  D     Y IVKNSWGS WGEK
Sbjct: 285 -CGSDL-DHGVAAVGYGTAKGVD-----YIIVKNSWGSKWGEK 320



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 31/206 (15%)

Query: 12  KGLGYLHTFMIKVALLESNIFQTRGY-------LNSPVTRFLNFMRDHDKVYSSVEDLLR 64
           K L    +F +  +L     F   GY       ++  +  F ++M  H K+Y S+E+ L 
Sbjct: 7   KALVLACSFCLFASLAFGRDFSIVGYSSEDLKSMDKLIELFESWMSKHGKIYQSIEEKLL 66

Query: 65  RHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQPSLQA 123
           R E F  N++  ++  +  S   +  +N+F DLS  + + +  GL +D +     P    
Sbjct: 67  RFEIFKDNLKHIDERNKVVSNYWL-GLNEFADLSHQEFKNKYLGLKVDYSRRRESP---- 121

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
                        F +  +    +LP++ DWR +G ++ VK QG C  CWAFS V  VE 
Sbjct: 122 -----------EEFTYKDV----ELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEG 166

Query: 184 MHAIQGNNLTELSVQHH---DKVYSS 206
           ++ I   NLT LS Q     D+ YS+
Sbjct: 167 INQIVTGNLTSLSEQELIDCDRTYSN 192


>gi|242072572|ref|XP_002446222.1| hypothetical protein SORBIDRAFT_06g005410 [Sorghum bicolor]
 gi|241937405|gb|EES10550.1| hypothetical protein SORBIDRAFT_06g005410 [Sorghum bicolor]
          Length = 340

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 157/294 (53%), Gaps = 40/294 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  +++VY    +  +R E F  NV+  E + +  +     GVN+F DL+  + +     
Sbjct: 41  MAQYNRVYKDATEKAQRFEVFKANVKFIESFNAGGNRKFWLGVNQFADLTNDEFRAT--- 97

Query: 257 NLDSTLEDIQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
               T +  +PS ++ P            F++ ++   D LP + DWR +G ++ +K+QG
Sbjct: 98  ---KTNKGFKPSPVKVP----------TGFRYENVSV-DALPASIDWRTKGAVTPIKDQG 143

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDN 373
           +C CCWAFSAV   E +  I  + L  LS Q+LVDCD+   + GC GG MDDA ++II N
Sbjct: 144 QCGCCWAFSAVAATEGIVKISTDKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKN 203

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++ +YPY A++ +  C  G        +K +  +P  +E  + K VA + P+SV +
Sbjct: 204 GGLTTESSYPYTATDGK--CKSGTNSA--ANIKGFEDVPANDEAALMKAVANQ-PVSVAV 258

Query: 434 NANGLFY--YSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           +   + +  YSGGV+      DL+  +    YG +     YW++KNSWG+ WGE
Sbjct: 259 DGGDMTFQLYSGGVMTGSCGTDLDHGIAAIGYGQTSDGTKYWLLKNSWGTTWGE 312



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 94/163 (57%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+ ++ +YPY A++ +  C  G
Sbjct: 167 KLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTESSYPYTATDGK--CKSG 224

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
                   +K +  +P  +E  + K VA + P+SV ++   + +  YSGGV+  +   C 
Sbjct: 225 TNSA--ANIKGFEDVPANDEAALMKAVANQ-PVSVAVDGGDMTFQLYSGGVMTGS---CG 278

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H +  +GYG+    DGT   YW++KNSWG+ WGE   L
Sbjct: 279 TDL-DHGIAAIGYGQTS--DGTK--YWLLKNSWGTTWGENGYL 316



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 18/159 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V R   +M  +++VY    +  +R E F  NV+  E +    +      VN+F DL++ +
Sbjct: 34  VARHEQWMAQYNRVYKDATEKAQRFEVFKANVKFIESFNAGGNRKFWLGVNQFADLTNDE 93

Query: 102 LQQLTGLNLDSTLEDIQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            +         T +  +PS ++ P            F++ ++   D LP + DWR +G +
Sbjct: 94  FRAT------KTNKGFKPSPVKVP----------TGFRYENVSV-DALPASIDWRTKGAV 136

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + +K+QG+C CCWAFSAV   E +  I  + L  LS Q 
Sbjct: 137 TPIKDQGQCGCCWAFSAVAATEGIVKISTDKLISLSEQE 175


>gi|224083362|ref|XP_002306996.1| predicted protein [Populus trichocarpa]
 gi|222856445|gb|EEE93992.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 160/303 (52%), Gaps = 46/303 (15%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV----FGVNKFFDLS 246
           +L E  +  H K+Y S+E+   R E F  N+     +  +++   V     G+N+F DLS
Sbjct: 31  DLFESWISKHQKIYESIEEKWHRFEIFKDNL-----FHIDETNKKVVNYWLGLNEFADLS 85

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
             + + +  GLN+D               SN+ +     F +  +     +P++ DWR +
Sbjct: 86  HEEFKNKYLGLNVDL--------------SNRRECS-EEFTYKDV---SSIPKSVDWRKK 127

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMD 364
           G ++ VK QG C  CWAFS V  VE ++ I   +LT LS Q+LVDCD + N GCNGG MD
Sbjct: 128 GAVTDVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTTYNNGCNGGLMD 187

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
            A  YII NGG+  ++ YPY   E    C + + E   V +  Y  +P   EE + K +A
Sbjct: 188 YAFAYIISNGGLHKEEDYPYIMEEGT--CEMRKAESEVVTISGYHDVPQNSEESLLKALA 245

Query: 425 TRGPLSVGMNANG--LFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDW 470
            + PLSV ++A+G    +YSGGV D      L+  +    YG++  + + +VKNSWGS W
Sbjct: 246 NQ-PLSVAIDASGRDFQFYSGGVFDGHCGTELDHGVAAVGYGSAKGLDFIVVKNSWGSKW 304

Query: 471 GEK 473
           GEK
Sbjct: 305 GEK 307



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++LVDCD + N GCNGG MD A  YII NGG+  ++ YPY   E    C
Sbjct: 157 IVTGNLTSLSEQELVDCDTTYNNGCNGGLMDYAFAYIISNGGLHKEEDYPYIMEEGT--C 214

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + + E   V +  Y  +P   EE + K +A + PLSV ++A+G    +YSGGV D +  
Sbjct: 215 EMRKAESEVVTISGYHDVPQNSEESLLKALANQ-PLSVAIDASGRDFQFYSGGVFDGH-- 271

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG  +  D     + +VKNSWGS WGEK
Sbjct: 272 -CGTEL-DHGVAAVGYGSAKGLD-----FIVVKNSWGSKWGEK 307



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 20/158 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +  F +++  H K+Y S+E+   R E F  N+   ++  ++     +  +N+F DLS  +
Sbjct: 30  IDLFESWISKHQKIYESIEEKWHRFEIFKDNLFHIDETNKKVVNYWL-GLNEFADLSHEE 88

Query: 102 LQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            + +  GLN+D               SN+ +     F +  +     +P++ DWR +G +
Sbjct: 89  FKNKYLGLNVDL--------------SNRRECS-EEFTYKDV---SSIPKSVDWRKKGAV 130

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           + VK QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 131 TDVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 168


>gi|302754322|ref|XP_002960585.1| hypothetical protein SELMODRAFT_266583 [Selaginella moellendorffii]
 gi|300171524|gb|EFJ38124.1| hypothetical protein SELMODRAFT_266583 [Selaginella moellendorffii]
          Length = 330

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 148/303 (48%), Gaps = 55/303 (18%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL-QQLTGLNLDS 260
           K Y++ E    R + F  N+ +A  +Q+ D  +AV G+ +F DL+E +  QQ  GL + S
Sbjct: 30  KAYATAEAYAHRLKVFEANLVRAVSHQALDP-SAVHGITQFSDLTEEEFKQQFLGLRVPS 88

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACC 320
            L +   +   P                     +DLPE FDWR  G +++VK QG C  C
Sbjct: 89  RLREANKAPVLP--------------------TNDLPEDFDWREHGAVTEVKNQGACGSC 128

Query: 321 WAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMDDALQYII 371
           WAFS  G +E  H ++   L  LS QQLVDCD S         + GCNGG M +A  Y++
Sbjct: 129 WAFSTTGAIEGAHFLETGKLISLSEQQLVDCDHSCDPTDKVSCDAGCNGGLMTNAYDYVM 188

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
            +GG+ ++  YPY  + + + C     +     V  +S +   +E+++   +   GPL++
Sbjct: 189 KSGGLETETDYPYTGNSNGK-CQFNANK-IVASVANFSTVSL-DEDQIAANLVKHGPLAI 245

Query: 432 GMNANGLFYYSGGV----------IDLNQRLYG-----------TSIPYWIVKNSWGSDW 470
           G+NA  +  Y GGV          ID    L G           T  PYWI+KNSWG+ W
Sbjct: 246 GINAVFMQTYIGGVSCPIICSKHHIDHGVLLVGYGAKGYAPIRFTEKPYWIIKNSWGATW 305

Query: 471 GEK 473
           GE+
Sbjct: 306 GEQ 308



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 16/167 (9%)

Query: 497 KLSRLATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD S         + GCNGG M +A  Y++ +GG+ ++  YPY  + +
Sbjct: 147 KLISLSEQQLVDCDHSCDPTDKVSCDAGCNGGLMTNAYDYVMKSGGLETETDYPYTGNSN 206

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
            + C     +     V  +S +   +E+++   +   GPL++G+NA  +  Y GGV    
Sbjct: 207 GK-CQFNANK-IVASVANFSTVSL-DEDQIAANLVKHGPLAIGINAVFMQTYIGGVS--C 261

Query: 608 QRLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGEK 652
             +C+    +H +++VGYG +       T  PYWI+KNSWG+ WGE+
Sbjct: 262 PIICSKHHIDHGVLLVGYGAKGYAPIRFTEKPYWIIKNSWGATWGEQ 308



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 22/157 (14%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           T F +F+    K Y++ E    R + F  N+ +A  +Q  D  +AV  + +F DL++ + 
Sbjct: 19  THFKSFIARFGKAYATAEAYAHRLKVFEANLVRAVSHQALDP-SAVHGITQFSDLTEEEF 77

Query: 103 -QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            QQ  GL + S L +   +   P                     +DLPE FDWR  G ++
Sbjct: 78  KQQFLGLRVPSRLREANKAPVLP--------------------TNDLPEDFDWREHGAVT 117

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +VK QG C  CWAFS  G +E  H ++   L  LS Q
Sbjct: 118 EVKNQGACGSCWAFSTTGAIEGAHFLETGKLISLSEQ 154


>gi|116787404|gb|ABK24495.1| unknown [Picea sitchensis]
 gi|224286306|gb|ACN40861.1| unknown [Picea sitchensis]
          Length = 452

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 157/297 (52%), Gaps = 34/297 (11%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L EL +  H + Y+ +++  +R   F  N     ++ ++ + +   G+N+F DLS    +
Sbjct: 41  LYELWLAEHKRAYNGLDEKQKRFSVFKDNFLYIHEH-NQGNRSYKLGLNQFADLSH---E 96

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
           +     L + L D +  L  P S        R +Q++    G+DLPE+ DWR +G ++ V
Sbjct: 97  EFKATYLGAKL-DTKKRLSRPPS--------RRYQYSD---GEDLPESIDWREKGAVTSV 144

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYI 370
           K+QG C  CWAFS V  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++I
Sbjct: 145 KDQGSCGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFI 204

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           I+NGG+ S++ YPY A +    C    +    V + +Y  +P  +E+ +KK  A + P+S
Sbjct: 205 INNGGLDSEEDYPYTAYDGS--CDSYRKNAHVVTIDDYEDVPENDEKSLKKAAANQ-PIS 261

Query: 431 VGMNANG--LFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           V + A+G    +Y  GV        +D    L G    +   YW VKNSWG  WGE+
Sbjct: 262 VAIEASGREFQFYDSGVFTSTCGTQLDHGVTLVGYGSESGTDYWTVKNSWGKSWGEE 318



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 15/166 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPY A +    C
Sbjct: 168 IVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGS--C 225

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
               +    V + +Y  +P  +E+ +KK  A + P+SV + A+G    +Y  GV      
Sbjct: 226 DSYRKNAHVVTIDDYEDVPENDEKSLKKAAANQ-PISVAIEASGREFQFYDSGVF---TS 281

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
            C  +  +H + +VGYG E   D     YW VKNSWG  WGE+  +
Sbjct: 282 TCGTQL-DHGVTLVGYGSESGTD-----YWTVKNSWGKSWGEEGFI 321



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 16/151 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++ +H + Y+ +++  +R   F  N     ++ + +    +  +N+F DLS    ++   
Sbjct: 45  WLAEHKRAYNGLDEKQKRFSVFKDNFLYIHEHNQGNRSYKL-GLNQFADLSH---EEFKA 100

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
             L + L D +  L  P S        R +Q++    G+DLPE+ DWR +G ++ VK+QG
Sbjct: 101 TYLGAKL-DTKKRLSRPPS--------RRYQYSD---GEDLPESIDWREKGAVTSVKDQG 148

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS V  VE ++ I   +L  LS Q
Sbjct: 149 SCGSCWAFSTVAAVEGINQIVTGDLISLSEQ 179


>gi|1617037|emb|CAA26255.1| cysteine proteinase I precursor [Dictyostelium discoideum]
          Length = 343

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 142/304 (46%), Gaps = 51/304 (16%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQ---SEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           +K YS  E+ L R E F +N+ K E+             FGVNKF DLS  + +     N
Sbjct: 37  NKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNN 95

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            ++   D  P       ++  D E            + +P AFDWR  G ++ VK QG+C
Sbjct: 96  KEAIFTDDLPV------ADYLDDEFI----------NSIPTAFDWRTRGAVTPVKNQGQC 139

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----------MSNGGCNGGRMDDAL 367
             CW+FS  G VE  H I  N L  LS Q LVDCD            + GCNGG   +A 
Sbjct: 140 GSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAY 199

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
            YII NGG+ ++ +YPY A    +        G   K+  ++ IP   E  M  ++ + G
Sbjct: 200 NYIIKNGGIQTESSYPYTAETGTQCNFNSANIG--AKISNFTMIP-KNETVMAGYIVSTG 256

Query: 428 PLSVGMNANGLFYYSGGVIDL------------------NQRLYGTSIPYWIVKNSWGSD 469
           PL++  +A    +Y GGV D+                     ++  ++PYWIVKNSWG+D
Sbjct: 257 PLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGAD 316

Query: 470 WGEK 473
           WGE+
Sbjct: 317 WGEQ 320



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 16/167 (9%)

Query: 496 SKLSRLATEKLVDCD----------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKAS 545
           +KL  L+ + LVDCD            + GCNGG   +A  YII NGG+ ++ +YPY A 
Sbjct: 160 NKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAE 219

Query: 546 ESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID 605
              +        G   K+  ++ IP   E  M  ++ + GPL++  +A    +Y GGV D
Sbjct: 220 TGTQCNFNSANIG--AKISNFTMIP-KNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFD 276

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +    CNP + +H ++IVGY  +      ++PYWIVKNSWG+DWGE+
Sbjct: 277 IP---CNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQ 320



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 20/186 (10%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA 76
           +   ++ V  + +    +RG      ++FL F    +K YS  E+ L R E F +N+ K 
Sbjct: 1   MKVILLFVLAVFTVFVSSRGIPPEEQSQFLEFQDKFNKKYSH-EEYLERFEIFKSNLGKI 59

Query: 77  EDYQR---EDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTE 133
           E+             F VNKF DLS  + +     N ++   D  P       ++  D E
Sbjct: 60  EELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPV------ADYLDDE 113

Query: 134 MRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLT 193
                       + +P AFDWR  G ++ VK QG+C  CW+FS  G VE  H I  N L 
Sbjct: 114 FI----------NSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLV 163

Query: 194 ELSVQH 199
            LS Q+
Sbjct: 164 SLSEQN 169


>gi|357446975|ref|XP_003593763.1| Cysteine proteinase [Medicago truncatula]
 gi|355482811|gb|AES64014.1| Cysteine proteinase [Medicago truncatula]
          Length = 350

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 169/328 (51%), Gaps = 44/328 (13%)

Query: 175 FSAVGVVEAMHAIQGNNLTELSV--------QHHDKVYSSVEDLLRRHENFVTNVEKAED 226
           F  + +    +      LTE SV          +++ Y++  ++ +R + F  N+E  E+
Sbjct: 7   FCIILLWACAYPTMSRTLTESSVVEAHQQWMMKYERTYTNSSEMEKRKKIFKENLEYIEN 66

Query: 227 YQSEDSGTAVFGVNKFFDL-SESDLQQLTGLNLDSTLEDIQ-PSLQAPFSSNQTDTEMRA 284
           + +  + +   G+N++ DL SE  +   TG  +   L D +  S+  PF+ N        
Sbjct: 67  FNNVGNKSYKLGLNRYSDLTSEEFIASHTGFKVSDQLSDSKMRSVAIPFNLN-------- 118

Query: 285 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELS 344
                    DD+P  FDWR +GV++ VK Q +C CCWAF+AV  VE +  I+  +L  LS
Sbjct: 119 ---------DDVPTNFDWREKGVVTDVKNQRQCGCCWAFTAVAAVEGIVKIKNGNLISLS 169

Query: 345 VQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVK 404
            QQLVDCD  + GC GG    A   II + G+V +  YPYKA++ +  C +G+  G   +
Sbjct: 170 EQQLVDCDRQSSGCGGGDFVLAFDSIIKSRGIVKEDDYPYKANDVQT-CQLGQIPG-AAQ 227

Query: 405 VKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF-YYSGGVID------LNQRL----Y 453
           +  Y ++P  +E+++ + V  + P+SV ++ +  F +Y GGV +      LN  +    Y
Sbjct: 228 INGYFKVPANDEQQLLRAVLQQ-PVSVAISTSYDFHHYMGGVYEGSCGPKLNHAVTIIGY 286

Query: 454 GTS---IPYWIVKNSWGSDWGEKVEDKV 478
           G S     YW++KNSWG  WGEK   KV
Sbjct: 287 GVSEAGKKYWLIKNSWGETWGEKGYMKV 314



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 22/195 (11%)

Query: 469 DWGEK--VED-----KVGSSGNRTRDLELTGVLPSK---LSRLATEKLVDCDMSNGGCNG 518
           DW EK  V D     + G     T    + G++  K   L  L+ ++LVDCD  + GC G
Sbjct: 126 DWREKGVVTDVKNQRQCGCCWAFTAVAAVEGIVKIKNGNLISLSEQQLVDCDRQSSGCGG 185

Query: 519 GRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMK 578
           G    A   II + G+V +  YPYKA++ +  C +G+  G   ++  Y ++P  +E+++ 
Sbjct: 186 GDFVLAFDSIIKSRGIVKEDDYPYKANDVQT-CQLGQIPG-AAQINGYFKVPANDEQQLL 243

Query: 579 KWVATRGPLSVGMNANGLF-YYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIP 637
           + V  + P+SV ++ +  F +Y GGV + +   C PK  NHA+ I+GYG  E        
Sbjct: 244 RAVLQQ-PVSVAISTSYDFHHYMGGVYEGS---CGPKL-NHAVTIIGYGVSEAGK----K 294

Query: 638 YWIVKNSWGSDWGEK 652
           YW++KNSWG  WGEK
Sbjct: 295 YWLIKNSWGETWGEK 309



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 111/233 (47%), Gaps = 35/233 (15%)

Query: 39  NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLS 98
           +S V     +M  +++ Y++  ++ +R + F  N+E  E++    + +    +N++ DL+
Sbjct: 27  SSVVEAHQQWMMKYERTYTNSSEMEKRKKIFKENLEYIENFNNVGNKSYKLGLNRYSDLT 86

Query: 99  DSD-LQQLTGLNLDSTLEDIQ-PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
             + +   TG  +   L D +  S+  PF+ N                 DD+P  FDWR 
Sbjct: 87  SEEFIASHTGFKVSDQLSDSKMRSVAIPFNLN-----------------DDVPTNFDWRE 129

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH---HDKVYSSV--EDLL 211
           +GV++ VK Q +C CCWAF+AV  VE +  I+  NL  LS Q     D+  S     D +
Sbjct: 130 KGVVTDVKNQRQCGCCWAFTAVAAVEGIVKIKNGNLISLSEQQLVDCDRQSSGCGGGDFV 189

Query: 212 RRHENFVTN--VEKAED--YQSEDSGTAVFG-------VNKFFDLSESDLQQL 253
              ++ + +  + K +D  Y++ D  T   G       +N +F +  +D QQL
Sbjct: 190 LAFDSIIKSRGIVKEDDYPYKANDVQTCQLGQIPGAAQINGYFKVPANDEQQL 242


>gi|18402225|ref|NP_566633.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|11994461|dbj|BAB02463.1| cysteine proteinase [Arabidopsis thaliana]
 gi|17065298|gb|AAL32803.1| cysteine proteinase [Arabidopsis thaliana]
 gi|20260004|gb|AAM13349.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332642713|gb|AEE76234.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 452

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 176/342 (51%), Gaps = 50/342 (14%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            + K Y+ + +  RR E F  N++  E++ S  + T   G+ +F DL+  + +    + L
Sbjct: 49  ENRKNYNGLGEKERRFEIFKDNLKFVEEHSSIPNRTYEVGLTRFADLTNDEFR---AIYL 105

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
            S +E             +T   ++  ++   + GD LP+A DWRA+G ++ VK+QG C 
Sbjct: 106 RSKME-------------RTRVPVKGEKY-LYKVGDSLPDAIDWRAKGAVNPVKDQGSCG 151

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVV 377
            CWAFSA+G VE ++ I+   L  LS Q+LVDCD S N GC GG MD A ++II+NGG+ 
Sbjct: 152 SCWAFSAIGAVEGINQIKTGELISLSEQELVDCDTSYNDGCGGGLMDYAFKFIIENGGID 211

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +++ YPY A++    C   ++    V +  Y  +P  +E+ +KK +A + P+SV + A G
Sbjct: 212 TEEDYPYIATDVNV-CNSDKKNTRVVTIDGYEDVPQNDEKSLKKALANQ-PISVAIEAGG 269

Query: 438 LFY--YSGGVIDLNQRLYGTSI---------------PYWIVKNSWGSDWGE----KVED 476
             +  Y+ GV        GTS+                YWIV+NSWGS+WGE    K+E 
Sbjct: 270 RAFQLYTSGVF---TGTCGTSLDHGVVAVGYGSEGGQDYWIVRNSWGSNWGESGYFKLER 326

Query: 477 KVGSSGNRTRDLELTGVLPSKLS-----RLATEKLVDCDMSN 513
            +  S  +   + +    P+K S     +      V CD SN
Sbjct: 327 NIKESSGKC-GVAMMASYPTKSSGSNPPKPPAPSPVVCDKSN 367



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 94/158 (59%), Gaps = 14/158 (8%)

Query: 497 KLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           +L  L+ ++LVDCD S N GC GG MD A ++II+NGG+ +++ YPY A++    C   +
Sbjct: 172 ELISLSEQELVDCDTSYNDGCGGGLMDYAFKFIIENGGIDTEEDYPYIATDVNV-CNSDK 230

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNP 613
           +    V +  Y  +P  +E+ +KK +A + P+SV + A G  +  Y+ GV       C  
Sbjct: 231 KNTRVVTIDGYEDVPQNDEKSLKKALANQ-PISVAIEAGGRAFQLYTSGVF---TGTCG- 285

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            + +H ++ VGYG E  +D     YWIV+NSWGS+WGE
Sbjct: 286 TSLDHGVVAVGYGSEGGQD-----YWIVRNSWGSNWGE 318



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 35/224 (15%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++ ++ K Y+ + +  RR E F  N++  E++    + T    + +F DL++ + +    
Sbjct: 46  WLVENRKNYNGLGEKERRFEIFKDNLKFVEEHSSIPNRTYEVGLTRFADLTNDEFR---A 102

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           + L S +E             +T   ++  ++   + GD LP+A DWRA+G ++ VK+QG
Sbjct: 103 IYLRSKME-------------RTRVPVKGEKY-LYKVGDSLPDAIDWRAKGAVNPVKDQG 148

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED-----LLRRHENFVT--- 219
            C  CWAFSA+G VE ++ I+   L  LS Q      +S  D     L+     F+    
Sbjct: 149 SCGSCWAFSAIGAVEGINQIKTGELISLSEQELVDCDTSYNDGCGGGLMDYAFKFIIENG 208

Query: 220 NVEKAEDY----------QSEDSGTAVFGVNKFFDLSESDLQQL 253
            ++  EDY           S+   T V  ++ + D+ ++D + L
Sbjct: 209 GIDTEEDYPYIATDVNVCNSDKKNTRVVTIDGYEDVPQNDEKSL 252


>gi|332376813|gb|AEE63546.1| unknown [Dendroctonus ponderosae]
          Length = 312

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/280 (35%), Positives = 145/280 (51%), Gaps = 31/280 (11%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQS-EDSGTAVF--GVNKFFDLSESDLQQLTG 255
            H+KVY +V +   R   F  NV+  E+     ++G A +   VNKF DLS  +      
Sbjct: 31  QHNKVYETVYEEKLRFAIFQENVQIIEEQNRLYEAGEATYRMAVNKFADLSREEY----- 85

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L++       +P L+A       +               DLP A DWR EG +++VK+QG
Sbjct: 86  LSILKHQSSSRPQLKAKIHRPSLEK-------------PDLPNATDWRNEGAVTRVKDQG 132

Query: 316 KCACCWAFSAVGVVEAMHAIQGNS--LTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN 373
            C  CWAFS  G +E+ + ++     L E S QQL+DCD+ N  CNGG    A++Y + N
Sbjct: 133 SCGSCWAFSVTGTLESFYYLRHKEKGLVEFSEQQLLDCDLVNDACNGGEEAPAMEYFV-N 191

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+  + AYPY  +   RG     E     K++ Y +I  G+EE +   V   GP SV +
Sbjct: 192 YGIEREDAYPYVGA---RGTCQYNESAVYAKLENYIQIEPGDEETLLTVVGFLGPTSVAL 248

Query: 434 NANGLFYYSGGV-IDLNQRLYGTSIPYWIVKNSWGSDWGE 472
            A+GL +YS  V  D+++    T + YWI+KNSWG+DWGE
Sbjct: 249 EASGLAFYSQAVGYDVDEE---TGLDYWIIKNSWGADWGE 285



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 78/154 (50%), Gaps = 27/154 (17%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L   + ++L+DCD+ N  CNGG    A++Y + N G+  + AYPY  +   RG     E 
Sbjct: 159 LVEFSEQQLLDCDLVNDACNGGEEAPAMEYFV-NYGIEREDAYPYVGA---RGTCQYNES 214

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
               K++ Y +I  G+EE +   V   GP SV + A+GL +YS  V              
Sbjct: 215 AVYAKLENYIQIEPGDEETLLTVVGFLGPTSVALEASGLAFYSQAV-------------- 260

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                 GY  +E+   T + YWI+KNSWG+DWGE
Sbjct: 261 ------GYDVDEE---TGLDYWIIKNSWGADWGE 285



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 23/167 (13%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQR-EDSGTAVFE--VNKF 94
           L+    ++L F   H+KVY +V +   R   F  NV+  E+  R  ++G A +   VNKF
Sbjct: 18  LSQDSEKWLKFKNQHNKVYETVYEEKLRFAIFQENVQIIEEQNRLYEAGEATYRMAVNKF 77

Query: 95  FDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 154
            DLS  +      L++       +P L+A       +               DLP A DW
Sbjct: 78  ADLSREEY-----LSILKHQSSSRPQLKAKIHRPSLEK-------------PDLPNATDW 119

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNN--LTELSVQH 199
           R EG +++VK+QG C  CWAFS  G +E+ + ++     L E S Q 
Sbjct: 120 RNEGAVTRVKDQGSCGSCWAFSVTGTLESFYYLRHKEKGLVEFSEQQ 166


>gi|356533293|ref|XP_003535200.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD21a-like
           [Glycine max]
          Length = 466

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 155/288 (53%), Gaps = 30/288 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+++ +  RR + F  N+   E++      +   G+NKF DL+  + + +    L 
Sbjct: 55  HGKAYNALGEKERRFKIFKDNLRFIEEHNGAGDKSYKLGLNKFADLTNEEYRAMF---LG 111

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +      P  +A   + +TD         + R G++LP   DWR +G ++ +K+QG+C  
Sbjct: 112 TRTRG--PKNKAAVVAKKTDRY-------AYRAGEELPAMVDWREKGAVTPIKDQGQCGS 162

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS VG VE ++ I   +LT LS Q+LVDCD   N GCNGG MD A ++I+ NGG+ +
Sbjct: 163 CWAFSTVGAVEGINQIVTGNLTSLSEQELVDCDRGYNMGCNGGLMDYAFEFIVQNGGIDT 222

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           ++ YPY A ++   C    +    V +  Y  +P  +E+ + K VA + P+SV + A G+
Sbjct: 223 EEDYPYHAKDNT--CDPNRKNARVVTIDGYEDVPTNDEKSLMKAVANQ-PVSVAIEAGGM 279

Query: 439 FY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            +  Y  GV       +L+  +    YGT     YW+V+NSWGS WGE
Sbjct: 280 EFQLYQSGVFTGRCGTNLDHGVVAVGYGTENGTDYWLVRNSWGSAWGE 327



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++LVDCD   N GCNGG MD A ++I+ NGG+ +++ YPY A ++   C
Sbjct: 178 IVTGNLTSLSEQELVDCDRGYNMGCNGGLMDYAFEFIVQNGGIDTEEDYPYHAKDNT--C 235

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P  +E+ + K VA + P+SV + A G+ +  Y  GV      
Sbjct: 236 DPNRKNARVVTIDGYEDVPTNDEKSLMKAVANQ-PVSVAIEAGGMEFQLYQSGVF---TG 291

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C     +H ++ VGYG E   D     YW+V+NSWGS WGE
Sbjct: 292 RCGTNL-DHGVVAVGYGTENGTD-----YWLVRNSWGSAWGE 327



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 12/151 (7%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K Y+++ +  RR + F  N+   E++      +    +NKF DL++ + + +  
Sbjct: 51  WLVKHGKAYNALGEKERRFKIFKDNLRFIEEHNGAGDKSYKLGLNKFADLTNEEYRAMF- 109

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
             L +      P  +A   + +TD         + R G++LP   DWR +G ++ +K+QG
Sbjct: 110 --LGTRTRG--PKNKAAVVAKKTDRY-------AYRAGEELPAMVDWREKGAVTPIKDQG 158

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +C  CWAFS VG VE ++ I   NLT LS Q
Sbjct: 159 QCGSCWAFSTVGAVEGINQIVTGNLTSLSEQ 189


>gi|66803148|ref|XP_635417.1| cysteine proteinase 1 [Dictyostelium discoideum AX4]
 gi|166201987|sp|P04988.2|CYSP1_DICDI RecName: Full=Cysteine proteinase 1; Flags: Precursor
 gi|60463731|gb|EAL61909.1| cysteine proteinase 1 [Dictyostelium discoideum AX4]
          Length = 343

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 142/304 (46%), Gaps = 51/304 (16%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQ---SEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           +K YS  E+ L R E F +N+ K E+             FGVNKF DLS  + +     N
Sbjct: 37  NKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNN 95

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            ++   D  P       ++  D E            + +P AFDWR  G ++ VK QG+C
Sbjct: 96  KEAIFTDDLPV------ADYLDDEFI----------NSIPTAFDWRTRGAVTPVKNQGQC 139

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----------MSNGGCNGGRMDDAL 367
             CW+FS  G VE  H I  N L  LS Q LVDCD            + GCNGG   +A 
Sbjct: 140 GSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAY 199

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
            YII NGG+ ++ +YPY A    +        G   K+  ++ IP   E  M  ++ + G
Sbjct: 200 NYIIKNGGIQTESSYPYTAETGTQCNFNSANIG--AKISNFTMIP-KNETVMAGYIVSTG 256

Query: 428 PLSVGMNANGLFYYSGGVIDL------------------NQRLYGTSIPYWIVKNSWGSD 469
           PL++  +A    +Y GGV D+                     ++  ++PYWIVKNSWG+D
Sbjct: 257 PLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGAD 316

Query: 470 WGEK 473
           WGE+
Sbjct: 317 WGEQ 320



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 16/167 (9%)

Query: 496 SKLSRLATEKLVDCD----------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKAS 545
           +KL  L+ + LVDCD            + GCNGG   +A  YII NGG+ ++ +YPY A 
Sbjct: 160 NKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAE 219

Query: 546 ESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID 605
              +        G   K+  ++ IP   E  M  ++ + GPL++  +A    +Y GGV D
Sbjct: 220 TGTQCNFNSANIG--AKISNFTMIP-KNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFD 276

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +    CNP + +H ++IVGY  +      ++PYWIVKNSWG+DWGE+
Sbjct: 277 IP---CNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQ 320



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 20/186 (10%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA 76
           +   ++ V  + +    +RG      ++FL F    +K YS  E+ L R E F +N+ K 
Sbjct: 1   MKVILLFVLAVFTVFVSSRGIPLEEQSQFLEFQDKFNKKYSH-EEYLERFEIFKSNLGKI 59

Query: 77  EDYQR---EDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTE 133
           E+             F VNKF DLS  + +     N ++   D  P       ++  D E
Sbjct: 60  EELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPV------ADYLDDE 113

Query: 134 MRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLT 193
                       + +P AFDWR  G ++ VK QG+C  CW+FS  G VE  H I  N L 
Sbjct: 114 FI----------NSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLV 163

Query: 194 ELSVQH 199
            LS Q+
Sbjct: 164 SLSEQN 169


>gi|449455625|ref|XP_004145553.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 351

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 158/298 (53%), Gaps = 38/298 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  + +H K+Y ++E+   R E F  N+ K  D  ++   +   GVN+F DL+  + +
Sbjct: 47  LFEEWISNHGKIYETIEEKWHRFEVFKDNL-KHIDETNKKVTSYWLGVNEFADLTHQEFK 105

Query: 252 QL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL ++S+      + Q+P            F +  +    DLP++ DWR +G +++
Sbjct: 106 NMYLGLKVESSR-----TRQSP----------EEFTYKDVV---DLPKSVDWRKKGAVTR 147

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG C  CWAFS V  VE ++ I G +LT LS Q+L+DCD   N GC+GG MD A  +
Sbjct: 148 VKNQGSCGSCWAFSTVAAVEGINKIVGGNLTSLSEQELIDCDRPYNNGCHGGLMDYAFSF 207

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I+ +GG+  ++ YPY   ES      GE E   V +  Y  +P   E  + K +A + PL
Sbjct: 208 IVSSGGLHKEEDYPYLEVESTCDNKKGELE--VVTISGYKDVPENNEASLIKALAHQ-PL 264

Query: 430 SVGMNANG--LFYYSGGVID----------LNQRLYGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV D          +    YG+S  + Y IVKNSWG  WGEK
Sbjct: 265 SVAIEASGRDFQFYSGGVFDGPCGTQLDHGVTAVGYGSSKGVDYIIVKNSWGPKWGEK 322



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DCD   N GC+GG MD A  +I+ +GG+  ++ YPY   ES 
Sbjct: 169 INKIVGGNLTSLSEQELIDCDRPYNNGCHGGLMDYAFSFIVSSGGLHKEEDYPYLEVEST 228

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
                GE E   V +  Y  +P   E  + K +A + PLSV + A+G    +YSGGV D 
Sbjct: 229 CDNKKGELE--VVTISGYKDVPENNEASLIKALAHQ-PLSVAIEASGRDFQFYSGGVFD- 284

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  +  +H +  VGYG  +  D     Y IVKNSWG  WGEK
Sbjct: 285 --GPCGTQL-DHGVTAVGYGSSKGVD-----YIIVKNSWGPKWGEK 322



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 20/158 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +  F  ++ +H K+Y ++E+   R E F  N++  ++  ++ + +    VN+F DL+  +
Sbjct: 45  IELFEEWISNHGKIYETIEEKWHRFEVFKDNLKHIDETNKKVT-SYWLGVNEFADLTHQE 103

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            + +  GL ++S+      + Q+P            F +  +    DLP++ DWR +G +
Sbjct: 104 FKNMYLGLKVESSR-----TRQSP----------EEFTYKDVV---DLPKSVDWRKKGAV 145

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++VK QG C  CWAFS V  VE ++ I G NLT LS Q
Sbjct: 146 TRVKNQGSCGSCWAFSTVAAVEGINKIVGGNLTSLSEQ 183


>gi|414587996|tpg|DAA38567.1| TPA: hypothetical protein ZEAMMB73_390779 [Zea mays]
          Length = 343

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 163/339 (48%), Gaps = 47/339 (13%)

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQ 228
           CAC +    +   E           E  +  + +VY    +  RR E F  N+   E + 
Sbjct: 17  CACSFPSPVLAARELSDDAAMAERHERWMAVYGRVYKDAAEKARRFEVFKDNLAFVESFN 76

Query: 229 SEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN 288
           ++       GVN+F DL+  + +   G                P S+ +  T    F++ 
Sbjct: 77  ADKKNKFWLGVNQFADLTTEEFKANKGFK--------------PISAEEVPT--TGFKYE 120

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
           +L     LP A DWR +G ++ +K QG+C CCWAFSAV  +E +  +  ++L  LS Q+L
Sbjct: 121 NLSV-SALPTAVDWRTKGAVTPIKNQGQCGCCWAFSAVAAMEGIVKLSTDNLVSLSEQEL 179

Query: 349 VDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           VDCD    + GC GG MD A +++I NGG+ ++ +YPYKA + +  C  G +      +K
Sbjct: 180 VDCDTHSMDEGCEGGWMDSAFEFVIKNGGLATESSYPYKAVDGK--CKGGSKSA--ATIK 235

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI------DLNQRL----YG 454
            +  +P   E  + K VA++ P+SV ++A+      YSGGV+       L+  +    YG
Sbjct: 236 GHEDVPPNNEAALMKAVASQ-PVSVAVDASDRTFMLYSGGVMTGSCGTQLDHGIAAIGYG 294

Query: 455 T---SIPYWIVKNSWGSDWGEK--------VEDKVGSSG 482
                  YWI+KNSWG+ WGEK        + DK G  G
Sbjct: 295 VESDGTKYWILKNSWGTTWGEKRFLRMEKDISDKQGMCG 333



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 94/162 (58%), Gaps = 17/162 (10%)

Query: 498 LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ ++LVDCD    + GC GG MD A +++I NGG+ ++ +YPYKA + +  C  G 
Sbjct: 171 LVSLSEQELVDCDTHSMDEGCEGGWMDSAFEFVIKNGGLATESSYPYKAVDGK--CKGGS 228

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNP 613
           +      +K +  +P   E  + K VA++ P+SV ++A+      YSGGV+  +   C  
Sbjct: 229 KSA--ATIKGHEDVPPNNEAALMKAVASQ-PVSVAVDASDRTFMLYSGGVMTGS---CGT 282

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           +  +H +  +GYG E   DGT   YWI+KNSWG+ WGEK  L
Sbjct: 283 QL-DHGIAAIGYGVES--DGTK--YWILKNSWGTTWGEKRFL 319



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 17/156 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + +VY    +  RR E F  N+   E +  +        VN+F DL+  + +
Sbjct: 40  RHERWMAVYGRVYKDAAEKARRFEVFKDNLAFVESFNADKKNKFWLGVNQFADLTTEEFK 99

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
              G                P S+ +  T    F++ +L     LP A DWR +G ++ +
Sbjct: 100 ANKGFK--------------PISAEEVPT--TGFKYENLSV-SALPTAVDWRTKGAVTPI 142

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG+C CCWAFSAV  +E +  +  +NL  LS Q 
Sbjct: 143 KNQGQCGCCWAFSAVAAMEGIVKLSTDNLVSLSEQE 178


>gi|290980288|ref|XP_002672864.1| predicted protein [Naegleria gruberi]
 gi|284086444|gb|EFC40120.1| predicted protein [Naegleria gruberi]
          Length = 356

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 155/310 (50%), Gaps = 52/310 (16%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKA--EDYQSEDSGTAVFGVNKFFDLSESDLQQLTG 255
           + H K+Y + +   RR++ F  NVE+A  E+Y +E       GV +F DL+  + + +  
Sbjct: 42  RKHVKLYGTKQVQDRRYQIFKQNVERARFENYLTERDN---MGVTRFSDLTPDEFKSMFL 98

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN---SLRHGDDLPEAFDWRAEGVISKVK 312
           +   +           P  + +  + MR +  N   +++   D P+ FDWR    ++ VK
Sbjct: 99  MKSYT-----------PKQARELLSGMRQYPANAKLTMKQVSDAPKEFDWREHNAVTPVK 147

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----------MSNGGCNGGR 362
           +QG C  CW FS  G VE M+A +   L  LS QQLVDCD            N GCNGG 
Sbjct: 148 DQGNCGSCWTFSTTGNVEGMYAAKTGKLISLSEQQLVDCDHNCVVWEGEKTCNAGCNGGL 207

Query: 363 MDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKW 422
           M  + ++II  GG+V++++YPY+A ++   C         VK+  ++ +    E+EM  W
Sbjct: 208 MWSSFEHIIKTGGLVTEESYPYEAVDNR--CRFNVSNAV-VKISNWTFVS-SNEDEMAAW 263

Query: 423 VATRGPLSVGMNANGLFYYSGGVI--------DLNQRLY-----------GTSIPYWIVK 463
           +A  GP+++ +NA+ L YY  G++        +LN  +            G    YWIVK
Sbjct: 264 LANNGPIAIAINADYLQYYRKGILNPSRCDPEELNHGVLIVGYGEEKAANGKVEKYWIVK 323

Query: 464 NSWGSDWGEK 473
           NSW + WGEK
Sbjct: 324 NSWSASWGEK 333



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 100/166 (60%), Gaps = 16/166 (9%)

Query: 497 KLSRLATEKLVDCDMS----------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASE 546
           KL  L+ ++LVDCD +          N GCNGG M  + ++II  GG+V++++YPY+A +
Sbjct: 174 KLISLSEQQLVDCDHNCVVWEGEKTCNAGCNGGLMWSSFEHIIKTGGLVTEESYPYEAVD 233

Query: 547 SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDL 606
           +   C         VK+  ++ +    E+EM  W+A  GP+++ +NA+ L YY  G+  L
Sbjct: 234 NR--CRFNVSNAV-VKISNWTFVS-SNEDEMAAWLANNGPIAIAINADYLQYYRKGI--L 287

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           N   C+P+  NH ++IVGYGEE+  +G    YWIVKNSW + WGEK
Sbjct: 288 NPSRCDPEELNHGVLIVGYGEEKAANGKVEKYWIVKNSWSASWGEK 333



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 23/162 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA--EDY--QREDSGTAVFEVNKFFDLSDS 100
           F  F R H K+Y + +   RR++ F  NVE+A  E+Y  +R++ G     V +F DL+  
Sbjct: 37  FTQFRRKHVKLYGTKQVQDRRYQIFKQNVERARFENYLTERDNMG-----VTRFSDLTPD 91

Query: 101 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN---SLRHGDDLPEAFDWRAE 157
           + + +  +   +           P  + +  + MR +  N   +++   D P+ FDWR  
Sbjct: 92  EFKSMFLMKSYT-----------PKQARELLSGMRQYPANAKLTMKQVSDAPKEFDWREH 140

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
             ++ VK+QG C  CW FS  G VE M+A +   L  LS Q 
Sbjct: 141 NAVTPVKDQGNCGSCWTFSTTGNVEGMYAAKTGKLISLSEQQ 182


>gi|46309423|ref|YP_006313.1| ORF31 [Agrotis segetum granulovirus]
 gi|46200640|gb|AAS82707.1| ORF31 [Agrotis segetum granulovirus]
          Length = 327

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 161/311 (51%), Gaps = 38/311 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  VQ ++K YSS E+   + +NF  N+    +  S  S +AV+ +N + D+++++L 
Sbjct: 24  LFEDFVQKYNKSYSSEEERQIKFDNFKNNIRSINEKNSL-SNSAVYDINFYSDMNKNELL 82

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD---LPEAFDWRAEGVI 308
           +             Q   +     N  D          L +G+    LP++FDWR   VI
Sbjct: 83  RK------------QTGFKINLKKNNLDLSWNIKCNKKLINGNPAVLLPDSFDWRDRHVI 130

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQ 368
           + VK Q  C  CWAFS +  +E+++AI+ N L +LS QQLV+CD  N GCNGG M  A++
Sbjct: 131 TSVKNQRDCGSCWAFSTIANIESLYAIKYNKLLDLSEQQLVNCDEQNNGCNGGLMHWAME 190

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
            II  GGV ++  +PY AS+         ++GF V +   ++     E+ +++ +   GP
Sbjct: 191 EIIRQGGVSNETDFPYTASDG----FCKRKQGF-VNINGCNQFILSNEDRLRELLIFNGP 245

Query: 429 LSVGMNANGLFYYSGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGE--- 472
           +S+ ++   +  YS G+         LN  +    YG   +IPYWI+KNSWGS WGE   
Sbjct: 246 ISIAIDVIDVIDYSQGISSTCRNDNGLNHAVLLVGYGVKNNIPYWILKNSWGSQWGENGY 305

Query: 473 -KVEDKVGSSG 482
            +V+  + S G
Sbjct: 306 FRVQRNINSCG 316



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 92/163 (56%), Gaps = 15/163 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  +  +KL  L+ ++LV+CD  N GCNGG M  A++ II  GGV ++  +PY AS+   
Sbjct: 154 LYAIKYNKLLDLSEQQLVNCDEQNNGCNGGLMHWAMEEIIRQGGVSNETDFPYTASDG-- 211

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
                 ++GF V +   ++     E+ +++ +   GP+S+ ++   +  YS G+      
Sbjct: 212 --FCKRKQGF-VNINGCNQFILSNEDRLRELLIFNGPISIAIDVIDVIDYSQGI----SS 264

Query: 610 LC-NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C N    NHA+++VGYG +      +IPYWI+KNSWGS WGE
Sbjct: 265 TCRNDNGLNHAVLLVGYGVK-----NNIPYWILKNSWGSQWGE 302



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           LN     F +F++ ++K YSS E+   + +NF  N+    + +   S +AV+++N + D+
Sbjct: 18  LNDSEKLFEDFVQKYNKSYSSEEERQIKFDNFKNNIRSINE-KNSLSNSAVYDINFYSDM 76

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD---LPEAFDW 154
           + ++L +             Q   +     N  D          L +G+    LP++FDW
Sbjct: 77  NKNELLRK------------QTGFKINLKKNNLDLSWNIKCNKKLINGNPAVLLPDSFDW 124

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           R   VI+ VK Q  C  CWAFS +  +E+++AI+ N L +LS Q 
Sbjct: 125 RDRHVITSVKNQRDCGSCWAFSTIANIESLYAIKYNKLLDLSEQQ 169


>gi|297845064|ref|XP_002890413.1| hypothetical protein ARALYDRAFT_472321 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336255|gb|EFH66672.1| hypothetical protein ARALYDRAFT_472321 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 160/294 (54%), Gaps = 37/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TG 255
           + + +K Y +VE+ L R E F  N+ K  D  ++   +   G+N+F DLS  + +++  G
Sbjct: 55  ISNFEKAYETVEEKLLRFEVFKDNL-KHIDETNKKVKSYWLGLNEFADLSHEEFKKMYLG 113

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L  D    D                E R++   + R  + +P++ DWR +G +++VK QG
Sbjct: 114 LKTDIVRRD----------------EERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQG 157

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNG 374
            C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A +YI+ NG
Sbjct: 158 SCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNG 217

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+  ++ YPY  S  E  C + ++E   V +  +  +P  +E+ + K +A + PLSV ++
Sbjct: 218 GLRKEEDYPY--SMEEGTCEMQKDESETVTIDGHQDVPTNDEKSLLKALAHQ-PLSVAID 274

Query: 435 ANGL-FYYSGGV--------IDLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           A+G  F +  GV        +DL+  +    YG+S    Y IVKNSWG  WGEK
Sbjct: 275 ASGREFQFYSGVSVFDGRCGVDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEK 328



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 12/165 (7%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DCD + N GCNGG MD A +YI+ NGG+  ++ YPY  S  E
Sbjct: 174 INKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPY--SMEE 231

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL-FYYSGGVIDLN 607
             C + ++E   V +  +  +P  +E+ + K +A + PLSV ++A+G  F +  GV   +
Sbjct: 232 GTCEMQKDESETVTIDGHQDVPTNDEKSLLKALAHQ-PLSVAIDASGREFQFYSGVSVFD 290

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            R C     +H +  VGYG  +  D     Y IVKNSWG  WGEK
Sbjct: 291 GR-CGVDL-DHGVAAVGYGSSKGSD-----YIIVKNSWGPKWGEK 328



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 18/158 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +  F N++ + +K Y +VE+ L R E F  N++  ++  ++   +    +N+F DLS  +
Sbjct: 48  IELFENWISNFEKAYETVEEKLLRFEVFKDNLKHIDETNKK-VKSYWLGLNEFADLSHEE 106

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            +++  GL  D    D                E R++   + R  + +P++ DWR +G +
Sbjct: 107 FKKMYLGLKTDIVRRD----------------EERSYAEFAYRDVEAVPKSVDWRKKGAV 150

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++VK QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 151 AEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQ 188


>gi|242068363|ref|XP_002449458.1| hypothetical protein SORBIDRAFT_05g013840 [Sorghum bicolor]
 gi|241935301|gb|EES08446.1| hypothetical protein SORBIDRAFT_05g013840 [Sorghum bicolor]
          Length = 350

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 151/291 (51%), Gaps = 39/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGLNL 258
           H + Y    +  RR + F  N +  +   +    +    +N+F D++  +   + TGL  
Sbjct: 56  HGRTYKDEAEKARRFQVFKANADFVDRSNAAGGKSYELAINEFADMTNDEFVAMYTGL-- 113

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                  +P    P        +M  F++ +L   D   +A DWR +G ++ +K QG+C 
Sbjct: 114 -------KPVPAGP-------KKMAGFKYENLTLSDVDQQAVDWRQKGAVTGIKNQGQCG 159

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVV 377
           CCWAF+AV  VE++H I   +L  LS QQ++DCD   N GCNGG +D+A QYII NGG+ 
Sbjct: 160 CCWAFAAVAAVESIHQITTGNLVSLSEQQVLDCDTDGNNGCNGGYIDNAFQYIISNGGLA 219

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++ AYPY A++    C    +    V +  Y  +P G+E  +   VA + P++V ++A+ 
Sbjct: 220 TEDAYPYAAAQGT--CQSSVQPA--VTISSYQDVPSGDEAALAAAVANQ-PVAVAIDAHN 274

Query: 438 LF-YYSGGVI--------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
            F +YS GV+         LN  +    Y T+    PYW++KN WG +WGE
Sbjct: 275 NFQFYSSGVLTADTCGTPSLNHAVTAVGYSTAEDGTPYWLLKNQWGQNWGE 325



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 13/161 (8%)

Query: 493 VLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +    L  L+ ++++DCD   N GCNGG +D+A QYII NGG+ ++ AYPY A++    C
Sbjct: 176 ITTGNLVSLSEQQVLDCDTDGNNGCNGGYIDNAFQYIISNGGLATEDAYPYAAAQGT--C 233

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF-YYSGGVIDLNQRL 610
               +    V +  Y  +P G+E  +   VA + P++V ++A+  F +YS GV  L    
Sbjct: 234 QSSVQPA--VTISSYQDVPSGDEAALAAAVANQ-PVAVAIDAHNNFQFYSSGV--LTADT 288

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           C   + NHA+  VGY   E  DGT  PYW++KN WG +WGE
Sbjct: 289 CGTPSLNHAVTAVGYSTAE--DGT--PYWLLKNQWGQNWGE 325



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 17/157 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M +H + Y    +  RR + F  N +  +        +    +N+F D+++ +  
Sbjct: 48  RHQQWMAEHGRTYKDEAEKARRFQVFKANADFVDRSNAAGGKSYELAINEFADMTNDEFV 107

Query: 104 QL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            + TGL         +P    P        +M  F++ +L   D   +A DWR +G ++ 
Sbjct: 108 AMYTGL---------KPVPAGP-------KKMAGFKYENLTLSDVDQQAVDWRQKGAVTG 151

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +K QG+C CCWAF+AV  VE++H I   NL  LS Q 
Sbjct: 152 IKNQGQCGCCWAFAAVAAVESIHQITTGNLVSLSEQQ 188


>gi|4678299|emb|CAB41090.1| cysteine proteinase precursor-like protein [Arabidopsis thaliana]
          Length = 363

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 154/305 (50%), Gaps = 47/305 (15%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
            L +  + K YS+ E+ + R   F  NV KA ++Q  D  +AV GV +F DL+E + +++
Sbjct: 52  RLFMSDYGKNYSTREEYIHRLGIFAKNVLKAAEHQMMDP-SAVHGVTQFSDLTEEEFKRM 110

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                 + + D+  S      +     E+           D LPE FDWR +G +++VK 
Sbjct: 111 Y-----TGVADVGGSRGGTVGAEAPMVEV-----------DGLPEDFDWREKGGVTEVKN 154

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-----NGGCNGGRMDDALQ 368
           QG C  CWAFS  G  E  H +    L  LS QQLVDCD +     + GC GG M +A +
Sbjct: 155 QGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQLVDCDQADKKACDNGCGGGLMTNAYE 214

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
           Y+++ GG+  +++YPY     +RG    + E   V+V  ++ IP  +E ++   +   GP
Sbjct: 215 YLMEAGGLEEERSYPYTG---KRGHCKFDPEKVAVRVLNFTTIPL-DENQIAANLVRHGP 270

Query: 429 LSVGMNANGLFYYSGGVI--------DLNQRLY-------GTSI------PYWIVKNSWG 467
           L+VG+NA  +  Y GGV         ++N  +        G SI      PYWI+KNSWG
Sbjct: 271 LAVGLNAVFMQTYIGGVSCPLICSKRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWG 330

Query: 468 SDWGE 472
             WGE
Sbjct: 331 KKWGE 335



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 96/170 (56%), Gaps = 21/170 (12%)

Query: 493 VLPSKLSRLATEKLVDCDMSN-----GGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           V   KL  L+ ++LVDCD ++      GC GG M +A +Y+++ GG+  +++YPY     
Sbjct: 176 VSTGKLLSLSEQQLVDCDQADKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPYTG--- 232

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +RG    + E   V+V  ++ IP  +E ++   +   GPL+VG+NA  +  Y GGV    
Sbjct: 233 KRGHCKFDPEKVAVRVLNFTTIPL-DENQIAANLVRHGPLAVGLNAVFMQTYIGGVS--C 289

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGE 651
             +C+ +  NH +++VGYG +    G SI      PYWI+KNSWG  WGE
Sbjct: 290 PLICSKRNVNHGVLLVGYGSK----GFSILRLSNKPYWIIKNSWGKKWGE 335



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 17/157 (10%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  FM D+ K YS+ E+ + R   F  NV KA ++Q  D  +AV  V +F DL++ + 
Sbjct: 49  SKFRLFMSDYGKNYSTREEYIHRLGIFAKNVLKAAEHQMMDP-SAVHGVTQFSDLTEEEF 107

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +++      + + D+  S      +     E+           D LPE FDWR +G +++
Sbjct: 108 KRMY-----TGVADVGGSRGGTVGAEAPMVEV-----------DGLPEDFDWREKGGVTE 151

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK QG C  CWAFS  G  E  H +    L  LS Q 
Sbjct: 152 VKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQ 188


>gi|50355623|dbj|BAD29960.1| cysteine protease [Daucus carota]
          Length = 460

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 154/290 (53%), Gaps = 35/290 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           H K Y+++ +  +R + F  N    ++  +    +   G+N+F DL+  + + + TG+  
Sbjct: 51  HGKSYNALGEKEQRFQIFKDNFLYIDEQNAAKDRSFKLGLNRFADLTNEEYRSKYTGIRT 110

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
             + + +    Q               ++ SL  G+ LPE+ DWR  G ++ VK+QG+C 
Sbjct: 111 KDSRKKVSGKSQ---------------RYASLA-GESLPESVDWREHGAVASVKDQGQCG 154

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVV 377
            CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MDDA Q+II+NGG+ 
Sbjct: 155 SCWAFSTISAVEGINQIATGKLITLSEQELVDCDRSYNEGCNGGLMDDAFQFIINNGGID 214

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           SD  YPY   + +  C    +    V +  Y  +P  +E+ ++K  A + P+SV + A+G
Sbjct: 215 SDADYPYTGRDGQ--CDQYRKNAKVVTIDSYEDVPEYDEKALQKAAANQ-PISVAIEASG 271

Query: 438 --LFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
               +Y  G+       DL+  +    YGT     YWIV+NSWG+DWGEK
Sbjct: 272 RDFQFYDSGIFTGKCGTDLDHGVVVVGYGTENGKDYWIVRNSWGADWGEK 321



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 15/166 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   KL  L+ ++LVDCD S N GCNGG MDDA Q+II+NGG+ SD  YPY   + +  C
Sbjct: 171 IATGKLITLSEQELVDCDRSYNEGCNGGLMDDAFQFIINNGGIDSDADYPYTGRDGQ--C 228

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
               +    V +  Y  +P  +E+ ++K  A + P+SV + A+G    +Y  G+      
Sbjct: 229 DQYRKNAKVVTIDSYEDVPEYDEKALQKAAANQ-PISVAIEASGRDFQFYDSGIFTGK-- 285

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
            C     +H +++VGYG E  KD     YWIV+NSWG+DWGEK  L
Sbjct: 286 -CGTDL-DHGVVVVGYGTENGKD-----YWIVRNSWGADWGEKGYL 324



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 17/155 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           + +++  H K Y+++ +  +R + F  N    ++       +    +N+F DL++ + + 
Sbjct: 44  YESWLVKHGKSYNALGEKEQRFQIFKDNFLYIDEQNAAKDRSFKLGLNRFADLTNEEYRS 103

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           + TG+    + + +    Q               ++ SL  G+ LPE+ DWR  G ++ V
Sbjct: 104 KYTGIRTKDSRKKVSGKSQ---------------RYASLA-GESLPESVDWREHGAVASV 147

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFS +  VE ++ I    L  LS Q
Sbjct: 148 KDQGQCGSCWAFSTISAVEGINQIATGKLITLSEQ 182


>gi|449522968|ref|XP_004168497.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 348

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 158/298 (53%), Gaps = 38/298 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  + +H K+Y ++E+   R E F  N+ K  D  ++   +   GVN+F DL+  + +
Sbjct: 44  LFEEWISNHGKIYETIEEKWHRFEVFKDNL-KHIDETNKKVTSYWLGVNEFADLTHQEFK 102

Query: 252 QL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL ++S+      + Q+P            F +  +    DLP++ DWR +G +++
Sbjct: 103 NMYLGLKVESSR-----TRQSP----------EEFTYKDVV---DLPKSVDWRKKGAVTR 144

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG C  CWAFS V  VE ++ I G +LT LS Q+L+DCD   N GC+GG MD A  +
Sbjct: 145 VKNQGSCGSCWAFSTVAAVEGINKIVGGNLTSLSEQELIDCDRPYNNGCHGGLMDYAFSF 204

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I+ +GG+  ++ YPY   ES      GE E   V +  Y  +P   E  + K +A + PL
Sbjct: 205 IVSSGGLHKEEDYPYLEVESTCDNKKGELE--VVTISGYKDVPENNEASLIKALAHQ-PL 261

Query: 430 SVGMNANG--LFYYSGGVID----------LNQRLYGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV D          +    YG+S  + Y IVKNSWG  WGEK
Sbjct: 262 SVAIEASGRDFQFYSGGVFDGPCGTQLDHGVTAVGYGSSKGVDYIIVKNSWGPKWGEK 319



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DCD   N GC+GG MD A  +I+ +GG+  ++ YPY   ES 
Sbjct: 166 INKIVGGNLTSLSEQELIDCDRPYNNGCHGGLMDYAFSFIVSSGGLHKEEDYPYLEVEST 225

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
                GE E   V +  Y  +P   E  + K +A + PLSV + A+G    +YSGGV D 
Sbjct: 226 CDNKKGELE--VVTISGYKDVPENNEASLIKALAHQ-PLSVAIEASGRDFQFYSGGVFD- 281

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  +  +H +  VGYG  +  D     Y IVKNSWG  WGEK
Sbjct: 282 --GPCGTQL-DHGVTAVGYGSSKGVD-----YIIVKNSWGPKWGEK 319



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 20/158 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +  F  ++ +H K+Y ++E+   R E F  N++  ++  ++ + +    VN+F DL+  +
Sbjct: 42  IELFEEWISNHGKIYETIEEKWHRFEVFKDNLKHIDETNKKVT-SYWLGVNEFADLTHQE 100

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            + +  GL ++S+      + Q+P            F +  +    DLP++ DWR +G +
Sbjct: 101 FKNMYLGLKVESSR-----TRQSP----------EEFTYKDVV---DLPKSVDWRKKGAV 142

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++VK QG C  CWAFS V  VE ++ I G NLT LS Q
Sbjct: 143 TRVKNQGSCGSCWAFSTVAAVEGINKIVGGNLTSLSEQ 180


>gi|18423124|ref|NP_568722.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|75309064|sp|Q9FGR9.1|CEP1_ARATH RecName: Full=KDEL-tailed cysteine endopeptidase CEP1; AltName:
           Full=Cysteine proteinase CP56; Short=AtCP56; Flags:
           Precursor
 gi|9759028|dbj|BAB09397.1| cysteine endopeptidase [Arabidopsis thaliana]
 gi|20258850|gb|AAM13907.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|308097832|gb|ADO14465.1| papain [Arabidopsis thaliana]
 gi|332008536|gb|AED95919.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 361

 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 155/291 (53%), Gaps = 35/291 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGLNL 258
           H  V  S+E+  +R   F  NV+   +   +D    +  +NKF D++  + ++   G N+
Sbjct: 44  HHTVARSLEEKAKRFNVFKHNVKHIHETNKKDKSYKL-KLNKFGDMTSEEFRRTYAGSNI 102

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                         F   +  T  ++F + ++   + LP + DWR  G ++ VK QG+C 
Sbjct: 103 KH---------HRMFQGEKKAT--KSFMYANV---NTLPTSVDWRKNGAVTPVKNQGQCG 148

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVV 377
            CWAFS V  VE ++ I+   LT LS Q+LVDCD + N GCNGG MD A ++I + GG+ 
Sbjct: 149 SCWAFSTVVAVEGINQIRTKKLTSLSEQELVDCDTNQNQGCNGGLMDLAFEFIKEKGGLT 208

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           S+  YPYKAS+    C   +E    V +  +  +P   E+++ K VA + P+SV ++A G
Sbjct: 209 SELVYPYKASDET--CDTNKENAPVVSIDGHEDVPKNSEDDLMKAVANQ-PVSVAIDAGG 265

Query: 438 --LFYYSGGVI------DLNQRL----YGTSI---PYWIVKNSWGSDWGEK 473
               +YS GV       +LN  +    YGT+I    YWIVKNSWG +WGEK
Sbjct: 266 SDFQFYSEGVFTGRCGTELNHGVAVVGYGTTIDGTKYWIVKNSWGEEWGEK 316



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 95/163 (58%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   KL+ L+ ++LVDCD + N GCNGG MD A ++I + GG+ S+  YPYKAS+    C
Sbjct: 165 IRTKKLTSLSEQELVDCDTNQNQGCNGGLMDLAFEFIKEKGGLTSELVYPYKASDET--C 222

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              +E    V +  +  +P   E+++ K VA + P+SV ++A G    +YS GV      
Sbjct: 223 DTNKENAPVVSIDGHEDVPKNSEDDLMKAVANQ-PVSVAIDAGGSDFQFYSEGVF---TG 278

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  NH + +VGYG     DGT   YWIVKNSWG +WGEK
Sbjct: 279 RCGTEL-NHGVAVVGYG--TTIDGTK--YWIVKNSWGEEWGEK 316



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 16/150 (10%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL-TGL 108
           R H  V  S+E+  +R   F  NV+   +  ++D    + ++NKF D++  + ++   G 
Sbjct: 42  RSHHTVARSLEEKAKRFNVFKHNVKHIHETNKKDKSYKL-KLNKFGDMTSEEFRRTYAGS 100

Query: 109 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 168
           N+              F   +  T  ++F + ++   + LP + DWR  G ++ VK QG+
Sbjct: 101 NIKH---------HRMFQGEKKAT--KSFMYANV---NTLPTSVDWRKNGAVTPVKNQGQ 146

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           C  CWAFS V  VE ++ I+   LT LS Q
Sbjct: 147 CGSCWAFSTVVAVEGINQIRTKKLTSLSEQ 176


>gi|297802418|ref|XP_002869093.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314929|gb|EFH45352.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 355

 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 157/298 (52%), Gaps = 37/298 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H KVY SVE+ + R E F  N+    D ++ +  +   G+N+F DL+  + +
Sbjct: 50  LFESWMSEHSKVYKSVEEKVHRFEVFRENLMHI-DQRNNEINSYWLGLNEFADLTHEEFK 108

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL         QPS                F++  +    DLP++ DWR +G ++ 
Sbjct: 109 GRYLGLAKPQFSRKRQPSAN--------------FRYRDI---TDLPKSVDWRKKGAVAP 151

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK+QG+C  CWAFS V  VE ++ I   +L+ LS Q+L+DCD + N GCNGG MD A QY
Sbjct: 152 VKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQY 211

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           II  GG+  +  YPY   E    C   +E+  +V +  Y  +P  ++E + K +A + P+
Sbjct: 212 IISTGGLHKEDDYPYLMEEGI--CQEQKEDVERVTISGYEDVPENDDESLVKALAHQ-PV 268

Query: 430 SVGMNANG--LFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +Y GGV       DL+  +    YG+S    Y IVKNSWG  WGEK
Sbjct: 269 SVAIEASGRDFQFYKGGVFNGQCGTDLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEK 326



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 88/163 (53%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +    LS L+ ++L+DCD + N GCNGG MD A QYII  GG+  +  YPY   E    C
Sbjct: 176 ITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGI--C 233

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              +E+  +V +  Y  +P  ++E + K +A + P+SV + A+G    +Y GGV +    
Sbjct: 234 QEQKEDVERVTISGYEDVPENDDESLVKALAHQ-PVSVAIEASGRDFQFYKGGVFNGQ-- 290

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H +  VGYG  +  D     Y IVKNSWG  WGEK
Sbjct: 291 -CGTDL-DHGVAAVGYGSSKGSD-----YVIVKNSWGPRWGEK 326



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 19/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           F ++M +H KVY SVE+ + R E F  N+    D +  +  +    +N+F DL+  + + 
Sbjct: 51  FESWMSEHSKVYKSVEEKVHRFEVFRENLMHI-DQRNNEINSYWLGLNEFADLTHEEFKG 109

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +  GL         QPS                F++  +    DLP++ DWR +G ++ V
Sbjct: 110 RYLGLAKPQFSRKRQPSAN--------------FRYRDI---TDLPKSVDWRKKGAVAPV 152

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFS V  VE ++ I   NL+ LS Q
Sbjct: 153 KDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQ 187


>gi|6649575|gb|AAF21461.1|U69120_1 cysteine proteinase PWCP1 [Paragonimus westermani]
          Length = 427

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 144/290 (49%), Gaps = 40/290 (13%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           K YSS  D  +R+  F  N+ K +  Q  + GTA +G+ KF DLS               
Sbjct: 136 KSYSS--DTAKRYALFKYNLLKMQLIQRLEKGTANYGITKFSDLSA-------------- 179

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            E+ + SL          ++M    F +      LP +FDWRA G +++VK+QG C  CW
Sbjct: 180 -EEFRHSLANMKRRKSKGSQMETAIFPTTIQ--SLPPSFDWRANGAVTEVKDQGMCGSCW 236

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQA 381
           AF+  G +E     + N L  LS QQL+DCD  +  CNGG  + A   I+  GG++S++ 
Sbjct: 237 AFATTGNIEGQWFRKTNKLISLSEQQLLDCDTKDEACNGGLPEWAYDEIVKMGGLMSEKD 296

Query: 382 YPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYY 441
           YPY+A + E+ C +         +   + +P  +E ++  W+   GP+SVG+NAN L +Y
Sbjct: 297 YPYEAMK-EQSCHL-RRPNISAYINGSATLP-SDEAKLAAWLVQNGPISVGVNANFLQFY 353

Query: 442 SGGVIDLNQRL--------------YGTSI----PYWIVKNSWGSDWGEK 473
            GG+      L              YG S     PYWIVKNSWG  WGEK
Sbjct: 354 LGGISHPPHMLCSEAGLDHAVLLVGYGVSTFLRRPYWIVKNSWGGGWGEK 403



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 6/157 (3%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           +KL  L+ ++L+DCD  +  CNGG  + A   I+  GG++S++ YPY+A + E+ C +  
Sbjct: 253 NKLISLSEQQLLDCDTKDEACNGGLPEWAYDEIVKMGGLMSEKDYPYEAMK-EQSCHL-R 310

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +   + +P  +E ++  W+   GP+SVG+NAN L +Y GG+      LC+   
Sbjct: 311 RPNISAYINGSATLP-SDEAKLAAWLVQNGPISVGVNANFLQFYLGGISHPPHMLCSEAG 369

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +HA+++VGYG          PYWIVKNSWG  WGEK
Sbjct: 370 LDHAVLLVGYGVS---TFLRRPYWIVKNSWGGGWGEK 403



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 81/179 (45%), Gaps = 20/179 (11%)

Query: 22  IKVALLESNIFQTRGYLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQ 80
           I++  L SNI      L    +R F  F R   K YSS  D  +R+  F  N+ K +  Q
Sbjct: 103 IELVSLPSNIELLGFRLPQNTSRLFEEFQRKFRKSYSS--DTAKRYALFKYNLLKMQLIQ 160

Query: 81  REDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN 140
           R + GTA + + KF DLS                E+ + SL          ++M    F 
Sbjct: 161 RLEKGTANYGITKFSDLSA---------------EEFRHSLANMKRRKSKGSQMETAIFP 205

Query: 141 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +      LP +FDWRA G +++VK+QG C  CWAF+  G +E     + N L  LS Q 
Sbjct: 206 TTIQ--SLPPSFDWRANGAVTEVKDQGMCGSCWAFATTGNIEGQWFRKTNKLISLSEQQ 262


>gi|400180391|gb|AFP73334.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 155/294 (52%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS +       F+ N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSSTE-------FKINDLSD-DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L + +GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFCAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L + +GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFCAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  S   QTR      ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MSILITLFFVISMFNS---QTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS +
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSSTE 119

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                  F+ N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 120 -------FKINDLSD-DDMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|6650705|gb|AAF21977.1|AF115280_1 thiolproteinase SmTP1 [Sarcocystis muris]
          Length = 394

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 148/291 (50%), Gaps = 37/291 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H+K Y++ E+ L+R+  F  N+    ++  +   + V  +NKF DL+  + +Q       
Sbjct: 96  HNKFYATEEERLKRYAIFKNNLTYIHNHNMQGY-SYVLKMNKFGDLTLEEFRQ------- 147

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
             L   +P L+ P    + DT + + + N      D+P   DWR  G ++ VK+QG C  
Sbjct: 148 RYLGYKKPDLRTP--PREVDTTLESVEDN------DIPTHVDWRQRGCVTSVKDQGDCGS 199

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDNGGVV 377
           CWAFSA G +E ++  +   L  LS QQLVDC   + N GC+GGRM++A +Y+++NGG+ 
Sbjct: 200 CWAFSATGAMEGVYCAKTGKLVNLSQQQLVDCSRFLGNQGCDGGRMEEAFEYVVENGGIC 259

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           S + YPY   +   G     +      +  Y  +P   E+ MK  +A R P+SV + AN 
Sbjct: 260 SGENYPYMRKD---GVCKSSQCTSVATITGYRSVPRRSEKSMKTALALRSPVSVAIQANQ 316

Query: 438 L---FYYSGGV-------IDLNQRLYGTSIP------YWIVKNSWGSDWGE 472
               FYY G         +D    L G S        YWI+KNSWG+ WG+
Sbjct: 317 AAFQFYYDGIFDAPCGTNLDHGVLLVGYSAETAGQGDYWIMKNSWGAAWGK 367



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 18/161 (11%)

Query: 497 KLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDC   + N GC+GGRM++A +Y+++NGG+ S + YPY   +   G    
Sbjct: 219 KLVNLSQQQLVDCSRFLGNQGCDGGRMEEAFEYVVENGGICSGENYPYMRKD---GVCKS 275

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCN 612
            +      +  Y  +P   E+ MK  +A R P+SV + AN     +Y  G+ D       
Sbjct: 276 SQCTSVATITGYRSVPRRSEKSMKTALALRSPVSVAIQANQAAFQFYYDGIFDA------ 329

Query: 613 PKAQN--HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           P   N  H +++VGY  E    G    YWI+KNSWG+ WG+
Sbjct: 330 PCGTNLDHGVLLVGYSAETAGQGD---YWIMKNSWGAAWGK 367



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 16/156 (10%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  F RDH+K Y++ E+ L+R+  F  N+    ++  +   + V ++NKF DL+  + 
Sbjct: 87  SQFYQFQRDHNKFYATEEERLKRYAIFKNNLTYIHNHNMQGY-SYVLKMNKFGDLTLEEF 145

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +Q         L   +P L+ P    + DT + + + N      D+P   DWR  G ++ 
Sbjct: 146 RQ-------RYLGYKKPDLRTP--PREVDTTLESVEDN------DIPTHVDWRQRGCVTS 190

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG C  CWAFSA G +E ++  +   L  LS Q
Sbjct: 191 VKDQGDCGSCWAFSATGAMEGVYCAKTGKLVNLSQQ 226


>gi|297830592|ref|XP_002883178.1| hypothetical protein ARALYDRAFT_479457 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329018|gb|EFH59437.1| hypothetical protein ARALYDRAFT_479457 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 452

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 156/289 (53%), Gaps = 40/289 (13%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           K Y+ + +   R E F  N++  E++ S  + T   G+ +F DL+  + +    + L S 
Sbjct: 52  KNYNGLGEKETRFEIFTDNLKYIEEHNSVPNQTFEVGLTRFADLTNDEFR---AIYLRSK 108

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
           +E             +T   ++  ++   + GD LP+  DWRA+G ++ VK+QG C  CW
Sbjct: 109 ME-------------RTRVPVKGERY-LYKVGDTLPDQIDWRAKGAVNPVKDQGNCGSCW 154

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQ 380
           AFSA+G VE ++ I+   L  LS Q+LVDCD S NGGC GG MD A ++II+NGG+ +++
Sbjct: 155 AFSAIGAVEGINQIKTGELISLSEQELVDCDTSYNGGCGGGLMDYAFKFIIENGGIDTEE 214

Query: 381 AYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY 440
            YPY A++ +  C   ++    V +  Y  +P  +E+ +KK +A + P+SV + A G  +
Sbjct: 215 DYPYTATD-DNICNSDKKNSRVVTIDGYEDVPQNDEKSLKKALANQ-PISVAIEAGGRAF 272

Query: 441 --YSGGVIDLNQRLYGTSI---------------PYWIVKNSWGSDWGE 472
             Y  GV        GTS+                YWIV+NSWGS+WGE
Sbjct: 273 QLYKSGVF---TGTCGTSLDHGVVAVGYGSEGGQDYWIVRNSWGSNWGE 318



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 95/158 (60%), Gaps = 14/158 (8%)

Query: 497 KLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           +L  L+ ++LVDCD S NGGC GG MD A ++II+NGG+ +++ YPY A++ +  C   +
Sbjct: 172 ELISLSEQELVDCDTSYNGGCGGGLMDYAFKFIIENGGIDTEEDYPYTATD-DNICNSDK 230

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNP 613
           +    V +  Y  +P  +E+ +KK +A + P+SV + A G  +  Y  GV       C  
Sbjct: 231 KNSRVVTIDGYEDVPQNDEKSLKKALANQ-PISVAIEAGGRAFQLYKSGVF---TGTCG- 285

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            + +H ++ VGYG E  +D     YWIV+NSWGS+WGE
Sbjct: 286 TSLDHGVVAVGYGSEGGQD-----YWIVRNSWGSNWGE 318



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 17/152 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++ ++ K Y+ + +   R E F  N++  E++    + T    + +F DL++ + +    
Sbjct: 46  WLVENRKNYNGLGEKETRFEIFTDNLKYIEEHNSVPNQTFEVGLTRFADLTNDEFR---A 102

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           + L S +E             +T   ++  ++   + GD LP+  DWRA+G ++ VK+QG
Sbjct: 103 IYLRSKME-------------RTRVPVKGERY-LYKVGDTLPDQIDWRAKGAVNPVKDQG 148

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            C  CWAFSA+G VE ++ I+   L  LS Q 
Sbjct: 149 NCGSCWAFSAIGAVEGINQIKTGELISLSEQE 180


>gi|363814535|ref|NP_001242660.1| uncharacterized protein LOC100807362 precursor [Glycine max]
 gi|255636658|gb|ACU18666.1| unknown [Glycine max]
          Length = 367

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 159/289 (55%), Gaps = 37/289 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           H KVY++VE+  +R + F  N+   E++ + +  T   G+N+F DLS  + + +  G  +
Sbjct: 59  HGKVYNAVEEKEKRFQIFKDNLNFIEEHNAVNR-TYKVGLNRFSDLSNEEYRSKYLGTKI 117

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
           D +    +PS +                  S R  D+LPE+ DWR EG + +VK Q +C 
Sbjct: 118 DPSRMMARPSRRY-----------------SPRVADNLPESVDWRKEGAVVRVKNQSECE 160

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVV 377
            CWAFSA+  VE ++ I   +LT LS Q+L+DCD + N GC+GG +D A ++II+NGG+ 
Sbjct: 161 GCWAFSAIAAVEGINKIVTGNLTALSEQELLDCDRTVNAGCSGGLVDYAFEFIINNGGID 220

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +++ YP++ ++    C   +     V +  Y R+P  +E  +KK VA + P+SV + A G
Sbjct: 221 TEEDYPFQGADGI--CDQYKINARAVTIDGYERVPAYDELALKKAVANQ-PVSVAIEAYG 277

Query: 438 LFY--YSGGV--------ID--LNQRLYGT--SIPYWIVKNSWGSDWGE 472
             +  Y  G+        ID  +    YGT   I YWIVKNSWG +WGE
Sbjct: 278 KEFQLYESGIFTGTCGTSIDHGVTAVGYGTENGIDYWIVKNSWGENWGE 326



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 93/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DCD + N GC+GG +D A ++II+NGG+ +++ YP++ ++  
Sbjct: 174 INKIVTGNLTALSEQELLDCDRTVNAGCSGGLVDYAFEFIINNGGIDTEEDYPFQGADGI 233

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C   +     V +  Y R+P  +E  +KK VA + P+SV + A G  +  Y  G+   
Sbjct: 234 --CDQYKINARAVTIDGYERVPAYDELALKKAVANQ-PVSVAIEAYGKEFQLYESGIF-- 288

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   + +H +  VGYG E       I YWIVKNSWG +WGE
Sbjct: 289 -TGTCG-TSIDHGVTAVGYGTE-----NGIDYWIVKNSWGENWGE 326



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 19/152 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLT 106
           ++  H KVY++VE+  +R + F  N+   E++   +  T    +N+F DLS+ + + +  
Sbjct: 55  WLVKHGKVYNAVEEKEKRFQIFKDNLNFIEEHNAVNR-TYKVGLNRFSDLSNEEYRSKYL 113

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           G  +D +    +PS +                  S R  D+LPE+ DWR EG + +VK Q
Sbjct: 114 GTKIDPSRMMARPSRRY-----------------SPRVADNLPESVDWRKEGAVVRVKNQ 156

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +C  CWAFSA+  VE ++ I   NLT LS Q
Sbjct: 157 SECEGCWAFSAIAAVEGINKIVTGNLTALSEQ 188


>gi|30141019|dbj|BAC75923.1| cysteine protease-1 [Helianthus annuus]
          Length = 461

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 168/317 (52%), Gaps = 43/317 (13%)

Query: 190 NNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD 249
           N L E  +  H K Y+++ +  RR + F  N+   +++ S D  T   G+NKF DL+  +
Sbjct: 49  NALYESWLVKHGKTYNALGEKDRRFQIFKDNLRFIDEHNSGDH-TYKLGLNKFADLTNEE 107

Query: 250 LQQ-LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 308
            +   TG+    T++D            +  ++M++ ++ + R GD LPE  DWR +G +
Sbjct: 108 YRMTYTGIK---TIDD-----------KKKLSKMKSDRY-AYRSGDSLPEYVDWREQGAV 152

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDAL 367
           + VK+QG C  CWAFS  G VE ++ I    L  +S Q+LV+CD S N GCNGG MD A 
Sbjct: 153 TDVKDQGSCGSCWAFSTTGSVEGVNKIVTGDLISVSEQELVNCDTSYNQGCNGGLMDYAF 212

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           ++II NGG+ +++ YPY   + +  C   ++    V +  Y  +P  +E  +KK V+ + 
Sbjct: 213 EFIIKNGGIDTEEDYPYTGKDGK--CDKNKKNAKVVTIDSYEDVPVNDESSLKKAVSNQ- 269

Query: 428 PLSVGMNANG--LFYYSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE- 472
           P++V + A G    +Y+ G+        L+  +    YGT     YW+VKNSWG++WGE 
Sbjct: 270 PVAVAIEAGGRDFQFYTSGIFTGSCGTALDHGVLAAGYGTEDGKDYWLVKNSWGAEWGEG 329

Query: 473 -------KVEDKVGSSG 482
                   + DK G  G
Sbjct: 330 GYLKMERNIADKSGKCG 346



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 94/162 (58%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  ++ ++LV+CD S N GCNGG MD A ++II NGG+ +++ YPY   + +  C
Sbjct: 179 IVTGDLISVSEQELVNCDTSYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYTGKDGK--C 236

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              ++    V +  Y  +P  +E  +KK V+ + P++V + A G    +Y+ G+   +  
Sbjct: 237 DKNKKNAKVVTIDSYEDVPVNDESSLKKAVSNQ-PVAVAIEAGGRDFQFYTSGIFTGS-- 293

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H ++  GYG E+ KD     YW+VKNSWG++WGE
Sbjct: 294 -CG-TALDHGVLAAGYGTEDGKD-----YWLVKNSWGAEWGE 328



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 17/155 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++  H K Y+++ +  RR + F  N+   +++   D  T    +NKF DL++ + + 
Sbjct: 52  YESWLVKHGKTYNALGEKDRRFQIFKDNLRFIDEHNSGDH-TYKLGLNKFADLTNEEYRM 110

Query: 105 -LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             TG+    T++D            +  ++M++ ++ + R GD LPE  DWR +G ++ V
Sbjct: 111 TYTGIK---TIDD-----------KKKLSKMKSDRY-AYRSGDSLPEYVDWREQGAVTDV 155

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS  G VE ++ I   +L  +S Q
Sbjct: 156 KDQGSCGSCWAFSTTGSVEGVNKIVTGDLISVSEQ 190


>gi|20334377|gb|AAM19209.1|AF493234_1 cysteine protease [Solanum lycopersicum]
 gi|400180431|gb|AFP73353.1| cysteine protease [Solanum lycopersicum]
          Length = 345

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 32/294 (10%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS    TE +  + N L   D +P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSS----TEFK--KINDLSD-DYMPSNLDWRESGAVTQVK 147

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 148 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 207

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 208 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 262

Query: 433 MNAN-GLFYYSGGVIDLN--QRL--------YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D N   R+        YGT      YW++KNSWG+ WGE
Sbjct: 263 IAASQDLQFYAGGTYDGNCADRINHAVTAIGYGTDEEGQKYWLLKNSWGTSWGE 316



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     ++   
Sbjct: 170 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---QQYTC 226

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D N   C
Sbjct: 227 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGN---C 281

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +E+       YW++KNSWG+ WGE
Sbjct: 282 ADRI-NHAVTAIGYGTDEEGQ----KYWLLKNSWGTSWGE 316



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 19/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS  
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSS-- 117

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
             TE +  + N L   D +P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 118 --TEFK--KINDLSD-DYMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 172

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 173 GNLMEFSEQ 181


>gi|330792958|ref|XP_003284553.1| hypothetical protein DICPUDRAFT_96752 [Dictyostelium purpureum]
 gi|325085467|gb|EGC38873.1| hypothetical protein DICPUDRAFT_96752 [Dictyostelium purpureum]
          Length = 346

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 162/328 (49%), Gaps = 69/328 (21%)

Query: 185 HAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNV-------EKAEDYQSEDSGTAVF 237
           H I+         Q ++KVYSS E    + E F  N+       +KA+ ++S+      F
Sbjct: 22  HTIEQTQFVAFQ-QKYNKVYSSNE-YSAKFETFKANLGVIAQLNQKAKLHKSDTK----F 75

Query: 238 GVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLP 297
           GVN+F DLS ++ ++   LN     +  +P    P +   T+  +           + +P
Sbjct: 76  GVNEFADLSAAEFRKYY-LNA----QVAKPDASLPMAPLLTEEVL-----------ETIP 119

Query: 298 EAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---- 353
            AFDWR +G ++ VK QG+C  CW+FS  G +E    + GN+L  LS Q LVDCD     
Sbjct: 120 TAFDWRTKGAVTGVKNQGQCGSCWSFSTTGNIEGQWYLAGNTLVGLSEQNLVDCDHQCME 179

Query: 354 ------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK----- 402
                  + GC+GG   +A +Y+I+NGG+ S+ +YPY A       + G+   FK     
Sbjct: 180 YDGQKSCDAGCDGGLQPNAYRYVIENGGLDSENSYPYLA-------VTGDSCKFKSGNVA 232

Query: 403 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDL-------------- 448
            K+  ++ IP   E +M  ++AT GPL++  +A    +Y GGV DL              
Sbjct: 233 AKISNFTMIPQ-NETQMAGYLATHGPLAIAADAAEWQFYIGGVFDLPCGQSLDHGILIVG 291

Query: 449 ---NQRLYGTSIPYWIVKNSWGSDWGEK 473
               + ++G   PYWIVKNSWG+ WGE+
Sbjct: 292 FSAEKNIFGHLKPYWIVKNSWGASWGEQ 319



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 101/193 (52%), Gaps = 34/193 (17%)

Query: 480 SSGNRTRDLELTGVLPSKLSRLATEKLVDCDM----------SNGGCNGGRMDDALQYII 529
           ++GN      L G   + L  L+ + LVDCD            + GC+GG   +A +Y+I
Sbjct: 147 TTGNIEGQWYLAG---NTLVGLSEQNLVDCDHQCMEYDGQKSCDAGCDGGLQPNAYRYVI 203

Query: 530 DNGGVVSDQAYPYKASESERGCLVGEEEGFK-----VKVKEYSRIPYGEEEEMKKWVATR 584
           +NGG+ S+ +YPY A       + G+   FK      K+  ++ IP   E +M  ++AT 
Sbjct: 204 ENGGLDSENSYPYLA-------VTGDSCKFKSGNVAAKISNFTMIPQ-NETQMAGYLATH 255

Query: 585 GPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ--NHALIIVGYGEEEKKDGTSIPYWIVK 642
           GPL++  +A    +Y GGV DL      P  Q  +H ++IVG+  E+   G   PYWIVK
Sbjct: 256 GPLAIAADAAEWQFYIGGVFDL------PCGQSLDHGILIVGFSAEKNIFGHLKPYWIVK 309

Query: 643 NSWGSDWGEKVML 655
           NSWG+ WGE+  L
Sbjct: 310 NSWGASWGEQGYL 322



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 28/164 (17%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNV-------EKAEDYQREDSGTAVFEVNKFF 95
           T+F+ F + ++KVYSS E    + E F  N+       +KA+ ++ +      F VN+F 
Sbjct: 27  TQFVAFQQKYNKVYSSNE-YSAKFETFKANLGVIAQLNQKAKLHKSDTK----FGVNEFA 81

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS ++ ++   LN     +  +P    P +   T+  +           + +P AFDWR
Sbjct: 82  DLSAAEFRKYY-LNA----QVAKPDASLPMAPLLTEEVL-----------ETIPTAFDWR 125

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG+C  CW+FS  G +E    + GN L  LS Q+
Sbjct: 126 TKGAVTGVKNQGQCGSCWSFSTTGNIEGQWYLAGNTLVGLSEQN 169


>gi|400180387|gb|AFP73332.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    + + R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKVERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++   + PS   P SS    TE++    N L   DD+P   DW   G +++VK
Sbjct: 100 FTGLNIPNSY--LSPS---PMSS----TELK---INDLSD-DDMPSNLDWIESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     E+     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---EQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     E+   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---EQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 20/189 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    + + R   F 
Sbjct: 8   MNILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKVERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++   + PS   P SS  
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSY--LSPS---PMSS-- 117

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
             TE++    N L   DD+P   DW   G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 118 --TELK---INDLSD-DDMPSNLDWIESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIAT 171

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 172 GNLMEFSEQ 180


>gi|171702843|dbj|BAG16377.1| cysteine protease [Brassica rapa var. perviridis]
          Length = 431

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 163/324 (50%), Gaps = 41/324 (12%)

Query: 180 VVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGV 239
            V +   ++ + L E  V  H K  +S+ +  RR E F  N+   +++  ++  +   G+
Sbjct: 29  TVSSRSDVEVSRLYEEWVVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNL-SYRLGL 87

Query: 240 NKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEA 299
            KF DL+  + + +               L +      T T +R       R GD +PE+
Sbjct: 88  TKFADLTNDEYRSMY--------------LGSRLKRKATKTSLRY----EARVGDAIPES 129

Query: 300 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGC 358
            DWR EG +++VK+QG C  CWAFS +G VE ++ I    L  LS Q+LVDCD S N GC
Sbjct: 130 VDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVDCDTSYNEGC 189

Query: 359 NGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEE 418
           NGG MD A ++II NGG+ +++ YPYK  +    C    +    V +  Y  +P   EE 
Sbjct: 190 NGGLMDYAFEFIIKNGGIDTEEDYPYKGVDGR--CDQTRKNAKVVTIDSYEDVPANSEES 247

Query: 419 MKKWVATRGPLSVGMNANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKN 464
           +KK ++ + P+SV +   G  +  Y  G+       DL+  +    YGT     YWIVKN
Sbjct: 248 LKKALSHQ-PISVAIEGGGRAFQLYDSGIFDGICGTDLDHGVVAVGYGTENGKDYWIVKN 306

Query: 465 SWGSDWGE----KVEDKVGSSGNR 484
           SWG+ WGE    ++E  + SS  +
Sbjct: 307 SWGTSWGESGYIRMERNIASSAGK 330



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ +++ YPYK  +  
Sbjct: 162 INKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTEEDYPYKGVDGR 221

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P   EE +KK ++ + P+SV +   G  +  Y  G+ D 
Sbjct: 222 --CDQTRKNAKVVTIDSYEDVPANSEESLKKALSHQ-PISVAIEGGGRAFQLYDSGIFD- 277

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              +C     +H ++ VGYG E  KD     YWIVKNSWG+ WGE
Sbjct: 278 --GICGTDL-DHGVVAVGYGTENGKD-----YWIVKNSWGTSWGE 314



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 19/147 (12%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLD 111
           H K  +S+ +  RR E F  N+   +++  ++  +    + KF DL++ + + +      
Sbjct: 49  HGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNL-SYRLGLTKFADLTNDEYRSMY----- 102

Query: 112 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 171
                    L +      T T +R       R GD +PE+ DWR EG +++VK+QG C  
Sbjct: 103 ---------LGSRLKRKATKTSLRY----EARVGDAIPESVDWRKEGAVAEVKDQGSCGS 149

Query: 172 CWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           CWAFS +G VE ++ I   +L  LS Q
Sbjct: 150 CWAFSTIGAVEGINKIVTGDLISLSEQ 176


>gi|225428328|ref|XP_002279940.1| PREDICTED: cysteine proteinase-like [Vitis vinifera]
          Length = 707

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/308 (36%), Positives = 157/308 (50%), Gaps = 38/308 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  H KVY S+E+ L R E F  N+   ++   E S +   G+N+F DLS  + +     
Sbjct: 408 VSKHGKVYKSMEEKLHRFEVFRENLNHIDERNKEVS-SYWLGLNEFADLSHEEFKSK--- 463

Query: 257 NLDSTLEDIQPSLQAPFS-SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
                       L+A F  S     E R       R   DLPE+ DWR +G ++ VK QG
Sbjct: 464 ---------YLGLRAEFPRSRDYSGEFR------YRDVADLPESVDWRKKGAVTHVKNQG 508

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNG 374
            C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  +I  NG
Sbjct: 509 ACGSCWAFSTVAAVEGINQIVTGNLTTLSEQELIDCDTTFNSGCNGGLMDYAFAFIASNG 568

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+  +  YPY   E    C   +E+   V +  Y  +P  +EE + K +A + PLSV + 
Sbjct: 569 GLHKEDDYPYLMEEGT--CEEQKEDVDIVTISGYEDVPEKDEESLLKALAHQ-PLSVAIE 625

Query: 435 ANG--LFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEKVEDKVGS 480
           A+G    +YSGGV +      L+  +    YG+S  + Y IVKNSWG  WGEK   ++  
Sbjct: 626 ASGRDFQFYSGGVFNGPCGTELDHGVAAVGYGSSKGLDYIIVKNSWGPKWGEKGYIRMKR 685

Query: 481 SGNRTRDL 488
           +  +T  L
Sbjct: 686 NTGKTEGL 693



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  +I  NGG+  +  YPY   E    C
Sbjct: 528 IVTGNLTTLSEQELIDCDTTFNSGCNGGLMDYAFAFIASNGGLHKEDDYPYLMEEGT--C 585

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              +E+   V +  Y  +P  +EE + K +A + PLSV + A+G    +YSGGV +    
Sbjct: 586 EEQKEDVDIVTISGYEDVPEKDEESLLKALAHQ-PLSVAIEASGRDFQFYSGGVFN---G 641

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG  +  D     Y IVKNSWG  WGEK
Sbjct: 642 PCGTEL-DHGVAAVGYGSSKGLD-----YIIVKNSWGPKWGEK 678



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 79/162 (48%), Gaps = 20/162 (12%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           ++  + RF +++  H KVY S+E+ L R E F  N+   ++  +E S +    +N+F DL
Sbjct: 397 IDKLIARFESWVSKHGKVYKSMEEKLHRFEVFRENLNHIDERNKEVS-SYWLGLNEFADL 455

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFS-SNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           S  + +                 L+A F  S     E R       R   DLPE+ DWR 
Sbjct: 456 SHEEFKSK------------YLGLRAEFPRSRDYSGEFR------YRDVADLPESVDWRK 497

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +G ++ VK QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 498 KGAVTHVKNQGACGSCWAFSTVAAVEGINQIVTGNLTTLSEQ 539


>gi|332326581|gb|AEE42614.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 167/342 (48%), Gaps = 46/342 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ LT LS QQLV CD  + GC GG M  A ++++   NG + 
Sbjct: 150 CWAFSAVGNIESQWAVAGHRLTALSEQQLVSCDDKDSGCGGGLMTQAFEWLLRNMNGTMX 209

Query: 378 SDQAYPYKASESE-RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +S  +   C    +     ++  Y  I    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEDSYPYVSSTGDVPACTNSSQLVPGARIDGYVTIE-SSETVMAAWLAKSGPISIAVDAS 268

Query: 437 GLFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK  V   +G + 
Sbjct: 269 SFMSYXSGVLTSCAGKXLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM 511
               +  ++  +P  L+             R+  E+++  DM
Sbjct: 329 CLLTEYPVSAHVPQSLAPGPSTESEEXAPKRVMVEQVICTDM 370



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESE-RGCLV 553
           +L+ L+ ++LV CD  + GC GG M  A ++++ N  G + ++ +YPY +S  +   C  
Sbjct: 169 RLTALSEQQLVSCDDKDSGCGGGLMTQAFEWLLRNMNGTMXTEDSYPYVSSTGDVPACTN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             +     ++  Y  I    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSQLVPGARIDGYVTIE-SSETVMAAWLAKSGPISIAVDASSFMSYXSGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           K  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 KXLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ LT LS Q 
Sbjct: 134 EKGAVTPVKDQGACGSCWAFSAVGNIESQWAVAGHRLTALSEQQ 177


>gi|413919736|gb|AFW59668.1| cysteine protease 1 [Zea mays]
          Length = 469

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 153/291 (52%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H + Y++V +  RR E F  N+   + + +  D+G   F  G+N+F DL+ +D  + T L
Sbjct: 53  HGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAGVHSFRLGLNRFADLT-NDEYRATYL 111

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            + S                +   E R          +DLPE+ DWRA+G +++VK+QG 
Sbjct: 112 GVRS----------------RPQRERRLGDRYLAGDNEDLPESVDWRAKGAVAEVKDQGS 155

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS +  VE ++ I    +  LS Q+LVDCD S N GCNGG MD A ++II+NGG
Sbjct: 156 CGSCWAFSTIAAVEGINQIVTGDMISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGG 215

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + +++ YPYK ++    C V  +    V +  Y  +P   E+ ++K VA + P+SV + A
Sbjct: 216 IDTEEDYPYKGTDGR--CDVNRKNAKVVTIDSYEDVPANSEKSLQKAVANQ-PISVAIEA 272

Query: 436 NGLFY--YSGGVID----------LNQRLYGT--SIPYWIVKNSWGSDWGE 472
            G  +  Y+ G+            +    YGT     YWIVKNSWGS WGE
Sbjct: 273 GGRAFQLYNSGIFTGTCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGE 323



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 93/162 (57%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   +  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +++ YPYK ++    C
Sbjct: 174 IVTGDMISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEEDYPYKGTDGR--C 231

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
            V  +    V +  Y  +P   E+ ++K VA + P+SV + A G  +  Y+ G+      
Sbjct: 232 DVNRKNAKVVTIDSYEDVPANSEKSLQKAVANQ-PISVAIEAGGRAFQLYNSGIF---TG 287

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YWIVKNSWGS WGE
Sbjct: 288 TCG-TALDHGVTAVGYGTENGKD-----YWIVKNSWGSSWGE 323



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 20/157 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +M  H + Y++V +  RR E F  N+   + +    D+G   F +  N+F DL++ D
Sbjct: 46  YAEWMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAGVHSFRLGLNRFADLTN-D 104

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
             + T L + S                +   E R          +DLPE+ DWRA+G ++
Sbjct: 105 EYRATYLGVRS----------------RPQRERRLGDRYLAGDNEDLPESVDWRAKGAVA 148

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +VK+QG C  CWAFS +  VE ++ I   ++  LS Q
Sbjct: 149 EVKDQGSCGSCWAFSTIAAVEGINQIVTGDMISLSEQ 185


>gi|413953667|gb|AFW86316.1| hypothetical protein ZEAMMB73_635707 [Zea mays]
          Length = 340

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 154/294 (52%), Gaps = 40/294 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TG 255
           +  + +VY    +  RR E F  NV+  E + +  +     GVN+F DL+  + + + T 
Sbjct: 41  MAQYSRVYKDASEKARRFEVFKANVKFIESFNAGGNNKFWLGVNQFADLTNDEFRSIKTN 100

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
               S+      +++ P            F++ ++   D LP   DWR +G ++ +K+QG
Sbjct: 101 KGFKSS------NMKIP----------TGFRYENVSV-DALPTTIDWRTKGAVTPIKDQG 143

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDN 373
           +C CCWAFSAV   E +  I    L  L+ Q+LVDCD+   + GC GG MDDA ++II+N
Sbjct: 144 QCGCCWAFSAVAATEGIVKISTGKLVSLAEQELVDCDVHGEDQGCEGGLMDDAFKFIINN 203

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++ +YPY A++ +  C  G        +K Y  +P  +E  + K VA + P+SV +
Sbjct: 204 GGLTTESSYPYTAADGK--CKSGSNSA--ATIKGYEDVPANDEAALMKAVANQ-PVSVAV 258

Query: 434 NANGLF--YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           +   +   +YS GV+      DL+  +    YG +     YW++KNSWG+ WGE
Sbjct: 259 DGGDMTFQFYSSGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWGE 312



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 94/163 (57%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  LA ++LVDCD+   + GC GG MDDA ++II+NGG+ ++ +YPY A++ +  C  G
Sbjct: 167 KLVSLAEQELVDCDVHGEDQGCEGGLMDDAFKFIINNGGLTTESSYPYTAADGK--CKSG 224

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P  +E  + K VA + P+SV ++   +   +YS GV+  +   C 
Sbjct: 225 SNSA--ATIKGYEDVPANDEAALMKAVANQ-PVSVAVDGGDMTFQFYSSGVMTGS---CG 278

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H +  +GYG+    DGT   YW++KNSWG+ WGE   L
Sbjct: 279 TDL-DHGIAAIGYGKTS--DGTK--YWLMKNSWGTTWGENGYL 316



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 18/159 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V R   +M  + +VY    +  RR E F  NV+  E +    +      VN+F DL++ +
Sbjct: 34  VARHEQWMAQYSRVYKDASEKARRFEVFKANVKFIESFNAGGNNKFWLGVNQFADLTNDE 93

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            + + T     S+      +++ P            F++ ++   D LP   DWR +G +
Sbjct: 94  FRSIKTNKGFKSS------NMKIP----------TGFRYENVSV-DALPTTIDWRTKGAV 136

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + +K+QG+C CCWAFSAV   E +  I    L  L+ Q 
Sbjct: 137 TPIKDQGQCGCCWAFSAVAATEGIVKISTGKLVSLAEQE 175


>gi|226496089|ref|NP_001149658.1| cysteine protease 1 precursor [Zea mays]
 gi|195629242|gb|ACG36262.1| cysteine protease 1 precursor [Zea mays]
          Length = 469

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 153/291 (52%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H + Y++V +  RR E F  N+   + + +  D+G   F  G+N+F DL+ +D  + T L
Sbjct: 53  HGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAGVHSFRLGLNRFADLT-NDEYRATYL 111

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            + S                +   E R          +DLPE+ DWRA+G ++++K+QG 
Sbjct: 112 GVRS----------------RPQRERRLGDRYLAGDNEDLPESVDWRAKGAVAEIKDQGS 155

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS +  VE ++ I    +  LS Q+LVDCD S N GCNGG MD A ++II+NGG
Sbjct: 156 CGSCWAFSTIAAVEGINQIVTGDMISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGG 215

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + +++ YPYK ++    C V  +    V +  Y  +P   E+ ++K VA + P+SV + A
Sbjct: 216 IDTEEDYPYKGTDGR--CDVNRKNAKVVTIDSYEDVPANSEKSLQKAVANQ-PISVAIEA 272

Query: 436 NGLFY--YSGGVID----------LNQRLYGT--SIPYWIVKNSWGSDWGE 472
            G  +  Y+ G+            +    YGT     YWIVKNSWGS WGE
Sbjct: 273 GGRAFQLYNSGIFTGTCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGE 323



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 93/162 (57%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   +  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +++ YPYK ++    C
Sbjct: 174 IVTGDMISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEEDYPYKGTDGR--C 231

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
            V  +    V +  Y  +P   E+ ++K VA + P+SV + A G  +  Y+ G+      
Sbjct: 232 DVNRKNAKVVTIDSYEDVPANSEKSLQKAVANQ-PISVAIEAGGRAFQLYNSGIF---TG 287

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YWIVKNSWGS WGE
Sbjct: 288 TCG-TALDHGVTAVGYGTENGKD-----YWIVKNSWGSSWGE 323



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 20/157 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +M  H + Y++V +  RR E F  N+   + +    D+G   F +  N+F DL++ D
Sbjct: 46  YAEWMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAGVHSFRLGLNRFADLTN-D 104

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
             + T L + S                +   E R          +DLPE+ DWRA+G ++
Sbjct: 105 EYRATYLGVRS----------------RPQRERRLGDRYLAGDNEDLPESVDWRAKGAVA 148

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++K+QG C  CWAFS +  VE ++ I   ++  LS Q
Sbjct: 149 EIKDQGSCGSCWAFSTIAAVEGINQIVTGDMISLSEQ 185


>gi|398010921|ref|XP_003858657.1| cathepsin L-like protease, partial [Leishmania donovani]
 gi|322496866|emb|CBZ31937.1| cathepsin L-like protease, partial [Leishmania donovani]
          Length = 345

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 33/317 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN--GGVV 377
           CWAFSAVG +E+  A  G+ L  LS QQLV CD  + GCNGG M  A ++++ +  G V 
Sbjct: 150 CWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   CL   +     ++  Y  IP   E  M  W+A  GP+++ ++A+
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDAS 268

Query: 437 GLFYYSGGVID------LNQ--RLYGTS----IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN    L G +    +PYW++KNSWG DWGEK  V   +G + 
Sbjct: 269 SFMSYQSGVLTSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVAMGRNA 328

Query: 483 NRTRDLELTGVLPSKLS 499
               +  ++  +P  L+
Sbjct: 329 CLLSEYPVSAHVPRSLT 345



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L  L+ ++LV CD  + GCNGG M  A ++++ +  G V ++++YPY +   +   CL  
Sbjct: 170 LVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNS 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +     ++  Y  IP   E  M  W+A  GP+++ ++A+    Y  GV+      C   
Sbjct: 230 SKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDASSFMSYQSGVLTS----CAGD 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A NH +++VGY     K G  +PYW++KNSWG DWGEK
Sbjct: 285 ALNHGVLLVGY----NKTG-GVPYWVIKNSWGEDWGEK 317



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG C  CWAFSAVG +E+  A  G+ L  LS Q 
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQ 177


>gi|297816790|ref|XP_002876278.1| hypothetical protein ARALYDRAFT_485911 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322116|gb|EFH52537.1| hypothetical protein ARALYDRAFT_485911 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 368

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 153/304 (50%), Gaps = 52/304 (17%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + K YS+ E+ + R   F  NV KA ++Q  D  TAV GV +F DL+E + +++      
Sbjct: 58  YGKNYSTREEYIHRLGIFAKNVLKAAEHQMMDP-TAVHGVTQFSDLTEEEFKRMY----- 111

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           + + D+  S      +     E+           D LPE FDWR +G +++VK QG C  
Sbjct: 112 TGVADVGGSRGHAVGAEAPMVEV-----------DGLPEDFDWREKGGVTEVKNQGACGS 160

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS----------NGGCNGGRMDDALQY 369
           CWAFS  G  E  H +    L  LS QQLVDCD +          + GC GG M +A +Y
Sbjct: 161 CWAFSTTGAAEGAHFVSTGKLLSLSEQQLVDCDQAVCDPKDKKACDNGCGGGLMTNAYEY 220

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           +++ GG+  +++YPY     +RG    + E   V+V  ++ IP  +E+++   +  +GPL
Sbjct: 221 LMEAGGLEEERSYPYTG---KRGHCKFDPEKVAVRVVNFTTIPL-DEDQIAANLVRQGPL 276

Query: 430 SVGMNANGLFYYSGGV----------IDLNQRLYG-----------TSIPYWIVKNSWGS 468
           +VG+NA  +  Y GGV          ++    L G           ++ PYWI+KNSWG 
Sbjct: 277 AVGLNAVFMQTYIGGVSCPLICSKRKVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGK 336

Query: 469 DWGE 472
            WGE
Sbjct: 337 KWGE 340



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 26/175 (14%)

Query: 493 VLPSKLSRLATEKLVDCDMS----------NGGCNGGRMDDALQYIIDNGGVVSDQAYPY 542
           V   KL  L+ ++LVDCD +          + GC GG M +A +Y+++ GG+  +++YPY
Sbjct: 176 VSTGKLLSLSEQQLVDCDQAVCDPKDKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPY 235

Query: 543 KASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGG 602
                +RG    + E   V+V  ++ IP  +E+++   +  +GPL+VG+NA  +  Y GG
Sbjct: 236 TG---KRGHCKFDPEKVAVRVVNFTTIPL-DEDQIAANLVRQGPLAVGLNAVFMQTYIGG 291

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGE 651
           V      +C+ +  NH +++VGYG +    G SI      PYWI+KNSWG  WGE
Sbjct: 292 VS--CPLICSKRKVNHGVLLVGYGSK----GFSILRLSNKPYWIIKNSWGKKWGE 340



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 17/157 (10%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  FM D+ K YS+ E+ + R   F  NV KA ++Q  D  TAV  V +F DL++ + 
Sbjct: 49  SKFRVFMSDYGKNYSTREEYIHRLGIFAKNVLKAAEHQMMDP-TAVHGVTQFSDLTEEEF 107

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +++      + + D+  S      +     E+           D LPE FDWR +G +++
Sbjct: 108 KRMY-----TGVADVGGSRGHAVGAEAPMVEV-----------DGLPEDFDWREKGGVTE 151

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK QG C  CWAFS  G  E  H +    L  LS Q 
Sbjct: 152 VKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQ 188


>gi|332326585|gb|AEE42616.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 167/342 (48%), Gaps = 46/342 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKBQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG + 
Sbjct: 150 CWAFSAVGNIESQWAVAGHRLXXLSEQQLVSCDDKDSGCXGGLMTQAFEWLLRXMNGTMF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +S  +   C    E     ++  Y  I    E  M  W+A  GP+S+G++A+
Sbjct: 210 TEDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIE-SNETVMAAWLAKSGPISIGVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK  V   +G + 
Sbjct: 269 SFMSYESGVLTSCAGKHLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM 511
               +  ++  +P  L+             R+  E+++  DM
Sbjct: 329 CLLXEYPVSAHVPQSLAPGPSTESEERAPKRVMVEQVICTDM 370



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIID--NGGVVSDQAYPYKASESERG-CLV 553
           +L  L+ ++LV CD  + GC GG M  A ++++   NG + ++ +YPY +S  +   C  
Sbjct: 169 RLXXLSEQQLVSCDDKDSGCXGGLMTQAFEWLLRXMNGTMFTEDSYPYVSSTGDVPECTN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  I    E  M  W+A  GP+S+G++A+    Y  GV+      C  
Sbjct: 229 SSELVPGARIDGYVMIE-SNETVMAAWLAKSGPISIGVDASSFMSYESGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           K  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 KHLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ L  LS Q 
Sbjct: 134 EKGAVTPVKBQGACGSCWAFSAVGNIESQWAVAGHRLXXLSEQQ 177


>gi|326493368|dbj|BAJ85145.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 436

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 51/341 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQL 253
           +  H   Y+++ +  RR E F  N+   + + +  D+G   F  G+N+F DL+  + +  
Sbjct: 47  MAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAGVHSFRLGLNRFADLTNEEYRS- 105

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
           T L    T  D +  L A + +   D               +LPE+ DWR +G +  VK+
Sbjct: 106 TYLGA-RTKPDRERKLSARYQAADND---------------ELPESVDWRKKGAVGAVKD 149

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIID 372
           QG C  CWAFSA+  VE ++ I    +  LS Q+LVDCD S N GCNGG MD A ++II+
Sbjct: 150 QGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDTSYNQGCNGGLMDYAFEFIIN 209

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S++ YPYK  E +  C   ++    V +  Y  +P   E+ ++K VA + P+SV 
Sbjct: 210 NGGIDSEEDYPYK--ERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQ-PISVA 266

Query: 433 MNANGLFY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE----KV 474
           + A G  +  Y  G+        L+  +    YGT     YW+V+NSWGS WGE    ++
Sbjct: 267 IEAGGRAFQLYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRM 326

Query: 475 EDKVGSSGNR---------TRDLELTGVLPSKLSRLATEKL 506
           E  + +S  +               T + P++L RL   +L
Sbjct: 327 ERNIKASSGKCGIAVEPSYPTKTARTPLTPAQLHRLPPHRL 367



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 15/154 (9%)

Query: 501 LATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 559
           L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPYK  E +  C   ++   
Sbjct: 179 LSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDSEEDYPYK--ERDNRCDANKKNAK 236

Query: 560 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPKAQN 617
            V +  Y  +P   E+ ++K VA + P+SV + A G  +  Y  G+       C   A +
Sbjct: 237 VVTIDGYEDVPVNSEKSLQKAVANQ-PISVAIEAGGRAFQLYKSGIF---TGTCG-TALD 291

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           H +  VGYG E  KD     YW+V+NSWGS WGE
Sbjct: 292 HGVAAVGYGTENGKD-----YWLVRNSWGSVWGE 320



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 20/157 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +M +H   Y+++ +  RR E F  N+   + +    D+G   F +  N+F DL++ +
Sbjct: 43  YAEWMAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAGVHSFRLGLNRFADLTNEE 102

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +  T L    T  D +  L A + +   D               +LPE+ DWR +G + 
Sbjct: 103 YRS-TYLGA-RTKPDRERKLSARYQAADND---------------ELPESVDWRKKGAVG 145

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CWAFSA+  VE ++ I   ++  LS Q
Sbjct: 146 AVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQ 182


>gi|146216000|gb|ABQ10202.1| cysteine protease Cp4 [Actinidia deliciosa]
          Length = 463

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 168/326 (51%), Gaps = 44/326 (13%)

Query: 172 CWAFSA-----VGVVEAMHAIQGNNLTELSVQH-----HDKVYSSVEDLLRRHENFVTNV 221
           C+AFS+     +   +  H  Q  +   +++       H K Y+++ +  RR E F  N+
Sbjct: 16  CFAFSSALDMSIISYDQTHPPQRTDAEAMAIYEKWLTTHGKAYNAIGEKERRFEIFKDNL 75

Query: 222 EKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTE 281
              +++ +  +G+   G+N+F DL+  + + +           +  +++    S  T ++
Sbjct: 76  RFVDEHNAV-AGSYRVGLNRFADLTNEEYRSMF----------LGGNMEMKERSASTKSD 124

Query: 282 MRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLT 341
             AF     R GD LP + DWR +G +S VK+QG+C  CWAFS +  VE ++ I    L 
Sbjct: 125 RYAF-----RAGDKLPGSVDWREKGAVSPVKDQGQCGSCWAFSTISAVEGINQIVTGELI 179

Query: 342 ELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEG 400
            LS Q+LVDCD S N GCNGG MD   Q+II+NGG+ +++ YPY+A +    C    +  
Sbjct: 180 SLSEQELVDCDKSYNMGCNGGLMDYGFQFIINNGGIDTEEDYPYRAVDGT--CDQFRKNA 237

Query: 401 FKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVI------DLNQRL 452
             V +  Y  +P  +E  +KK VA + P+SV + A G  +  Y  GV       +L+  +
Sbjct: 238 RVVSINGYEDVPEDDENSLKKAVANQ-PVSVAIEAGGRAFQLYESGVFTGHCGTNLDHGV 296

Query: 453 ----YGT--SIPYWIVKNSWGSDWGE 472
               YGT   + YW V+NSWG  WGE
Sbjct: 297 VAVGYGTENGVDYWTVRNSWGPKWGE 322



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 89/162 (54%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  +L  L+ ++LVDCD S N GCNGG MD   Q+II+NGG+ +++ YPY+A +    C
Sbjct: 173 IVTGELISLSEQELVDCDKSYNMGCNGGLMDYGFQFIINNGGIDTEEDYPYRAVDGT--C 230

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P  +E  +KK VA + P+SV + A G  +  Y  GV   +  
Sbjct: 231 DQFRKNARVVSINGYEDVPEDDENSLKKAVANQ-PVSVAIEAGGRAFQLYESGVFTGH-- 287

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C     +H ++ VGYG E   D     YW V+NSWG  WGE
Sbjct: 288 -CGTNL-DHGVVAVGYGTENGVD-----YWTVRNSWGPKWGE 322



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 33/226 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           +  ++  H K Y+++ +  RR E F  N+   +++    +G+    +N+F DL++ + + 
Sbjct: 47  YEKWLTTHGKAYNAIGEKERRFEIFKDNLRFVDEHNAV-AGSYRVGLNRFADLTNEEYRS 105

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +           +  +++    S  T ++  AF     R GD LP + DWR +G +S VK
Sbjct: 106 MF----------LGGNMEMKERSASTKSDRYAF-----RAGDKLPGSVDWREKGAVSPVK 150

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH---HDKVYSSVED--LLRRHENFVT 219
           +QG+C  CWAFS +  VE ++ I    L  LS Q     DK Y+   +  L+     F+ 
Sbjct: 151 DQGQCGSCWAFSTISAVEGINQIVTGELISLSEQELVDCDKSYNMGCNGGLMDYGFQFII 210

Query: 220 N---VEKAEDYQSED-SGTA--------VFGVNKFFDLSESDLQQL 253
           N   ++  EDY      GT         V  +N + D+ E D   L
Sbjct: 211 NNGGIDTEEDYPYRAVDGTCDQFRKNARVVSINGYEDVPEDDENSL 256


>gi|30387350|ref|NP_848429.1| cathepsin [Choristoneura fumiferana MNPV]
 gi|1168799|sp|P41715.1|CATV_NPVCF RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|332509|gb|AAA96732.1| cathepsin [Choristoneura fumiferana MNPV]
 gi|30270084|gb|AAP29900.1| cathepsin [Choristoneura fumiferana MNPV]
          Length = 324

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 162/317 (51%), Gaps = 39/317 (12%)

Query: 183 AMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKF 242
           A   ++  N  E  +   +K YSS  + LRR + F  N+E+  +    DS TA + +NKF
Sbjct: 18  AYDVLKAPNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDS-TAQYEINKF 76

Query: 243 FDLSESD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 301
            DLS+ + + + TGL+L             P  + Q   E+        R  D  P  FD
Sbjct: 77  ADLSKDETISKYTGLSL-------------PLQT-QNFCEVVVLD----RPPDKGPLEFD 118

Query: 302 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGG 361
           WR    ++ VK QG C  CWAF+ +G +E+  AI+ N    LS QQL+DCD  + GC+GG
Sbjct: 119 WRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDFVDAGCDGG 178

Query: 362 RMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKK 421
            +  A + +++ GG+ ++  YPY   E+  G        F VKVK+  R     EE++K 
Sbjct: 179 LLHTAFEAVMNMGGIQAESDYPY---EANNGDCRANAAKFVVKVKKCYRYITVFEEKLKD 235

Query: 422 WVATRGPLSVGMNANGLFYYSGGVID------LNQR--LYGTS----IPYWIVKNSWGSD 469
            + + GP+ V ++A+ +  Y  G++       LN    L G +    +P+WI+KN+WG+D
Sbjct: 236 LLRSVGPIPVAIDASDIVNYKRGIMKYCANHGLNHAVLLVGYAVENGVPFWILKNTWGAD 295

Query: 470 WGE----KVEDKVGSSG 482
           WGE    +V+  + + G
Sbjct: 296 WGEQGYFRVQQNINACG 312



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 90/157 (57%), Gaps = 12/157 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++   L+ ++L+DCD  + GC+GG +  A + +++ GG+ ++  YPY   E+  G     
Sbjct: 155 NQFINLSEQQLIDCDFVDAGCDGGLLHTAFEAVMNMGGIQAESDYPY---EANNGDCRAN 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
              F VKVK+  R     EE++K  + + GP+ V ++A+ +  Y  G++    + C    
Sbjct: 212 AAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNYKRGIM----KYCANHG 267

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NHA+++VGY  E       +P+WI+KN+WG+DWGE+
Sbjct: 268 LNHAVLLVGYAVE-----NGVPFWILKNTWGADWGEQ 299



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 23/181 (12%)

Query: 22  IKVALLESNIFQTRGY--LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           I + LL     Q   Y  L +P   F +F+   +K YSS  + LRR + F  N+E+  + 
Sbjct: 4   IVLYLLVYGAVQCAAYDVLKAP-NYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINK 62

Query: 80  QREDSGTAVFEVNKFFDLS-DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
              DS TA +E+NKF DLS D  + + TGL+L             P  + Q   E+    
Sbjct: 63  NHNDS-TAQYEINKFADLSKDETISKYTGLSL-------------PLQT-QNFCEVVVLD 107

Query: 139 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
               R  D  P  FDWR    ++ VK QG C  CWAF+ +G +E+  AI+ N    LS Q
Sbjct: 108 ----RPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQ 163

Query: 199 H 199
            
Sbjct: 164 Q 164


>gi|146216004|gb|ABQ10204.1| cysteine protease Cp6 [Actinidia deliciosa]
          Length = 461

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 47/307 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-----T 254
           H K Y+++ +  +R + F  N+   +++ +E S T   G+N+F DL+  + + +     T
Sbjct: 53  HGKSYNAIGEKEKRFQIFKDNLRFIDEHNAE-SRTYKVGLNRFADLTNDEYRSMYLGART 111

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
           G                  S  +  T+ R+ ++  +  G+ LP++ DWR +G +  VK+Q
Sbjct: 112 G------------------SRRRLSTQKRSDRYVPV-AGESLPDSVDWREKGAVVGVKDQ 152

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDN 373
           G C  CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II N
Sbjct: 153 GSCGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKN 212

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ +++ YPY A +    C    +    V + +Y  +P   E+ ++K VA + P+SV +
Sbjct: 213 GGIDTEEDYPYNARDGR--CDQYRKNAKVVTIDDYEDVPVNNEQALQKAVANQ-PVSVAI 269

Query: 434 NANGLF--YYSGGVIDLNQRL----------YGT--SIPYWIVKNSWGSDWGE----KVE 475
            A+G+   +Y  GV   N             YGT  S+ YWIVKNSWGS WGE    ++E
Sbjct: 270 EASGMAFQFYESGVFTGNCGTALDHGVTAVGYGTENSVDYWIVKNSWGSSWGESGYIRME 329

Query: 476 DKVGSSG 482
              G++G
Sbjct: 330 RNTGATG 336



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ +++ YPY A +    C
Sbjct: 173 IVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTEEDYPYNARDGR--C 230

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQR 609
               +    V + +Y  +P   E+ ++K VA + P+SV + A+G+   +Y  GV   N  
Sbjct: 231 DQYRKNAKVVTIDDYEDVPVNNEQALQKAVANQ-PVSVAIEASGMAFQFYESGVFTGN-- 287

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E      S+ YWIVKNSWGS WGE
Sbjct: 288 -CG-TALDHGVTAVGYGTE-----NSVDYWIVKNSWGSSWGE 322



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 25/159 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++  H K Y+++ +  +R + F  N+   +++  E S T    +N+F DL++ + + 
Sbjct: 46  YESWLVKHGKSYNAIGEKEKRFQIFKDNLRFIDEHNAE-SRTYKVGLNRFADLTNDEYRS 104

Query: 105 L-----TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
           +     TG                  S  +  T+ R+ ++  +  G+ LP++ DWR +G 
Sbjct: 105 MYLGARTG------------------SRRRLSTQKRSDRYVPV-AGESLPDSVDWREKGA 145

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +  VK+QG C  CWAFS +  VE ++ I   +L  LS Q
Sbjct: 146 VVGVKDQGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQ 184


>gi|118425914|gb|ABK90856.1| cathepsin-L-like cysteine peptidase [Radix peregra]
          Length = 324

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/296 (35%), Positives = 149/296 (50%), Gaps = 50/296 (16%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQ---SEDSGTAVFGVNKFFDLSESDLQQ-LTG 255
           H+K YS  ED++RR+  + TN++K E +    ++   T   G NK+ D++  + ++ L+G
Sbjct: 29  HNKTYSGDEDIIRRYI-WQTNLQKIEAHNELYAKGLSTYFLGENKYADMTNEEFRRTLSG 87

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L +D                     E+    F S    D LP A DWR EG +++VK+QG
Sbjct: 88  LRVDK--------------------ELTPGDFVSGMFKDSLPTAVDWRKEGYVTEVKDQG 127

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDN 373
           +C  CWAFS  G +E  H      L  LS   LVDC     N GCNGG MD+A +YI DN
Sbjct: 128 QCGSCWAFSTTGSLEGQHFKATKQLVSLSESNLVDCSKKWGNQGCNGGLMDNAFKYIADN 187

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++++YPYK    +R C   ++       K Y  I  G E+ +++ VAT GP+SV +
Sbjct: 188 KGIDTEKSYPYKP--EDRKCNF-KKANVGATDKLYKDITSGSEDALQEAVATIGPISVAI 244

Query: 434 NA--NGLFYYSGGVIDLNQRLYGTSI----------------PYWIVKNSWGSDWG 471
           +A  +    YSGGV   N++   T                   YWIVKNSWG  WG
Sbjct: 245 DASHDSFQLYSGGV--YNEKACSTKTLDHGVLAVGYDSKNGDDYWIVKNSWGKSWG 298



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 90/158 (56%), Gaps = 14/158 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           +L  L+   LVDC     N GCNGG MD+A +YI DN G+ ++++YPYK    +R C   
Sbjct: 151 QLVSLSESNLVDCSKKWGNQGCNGGLMDNAFKYIADNKGIDTEKSYPYKP--EDRKCNF- 207

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
           ++       K Y  I  G E+ +++ VAT GP+SV ++A  +    YSGGV   N++ C+
Sbjct: 208 KKANVGATDKLYKDITSGSEDALQEAVATIGPISVAIDASHDSFQLYSGGV--YNEKACS 265

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
            K  +H ++ VGY  +   D     YWIVKNSWG  WG
Sbjct: 266 TKTLDHGVLAVGYDSKNGDD-----YWIVKNSWGKSWG 298



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 25/153 (16%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQR---EDSGTAVFEVNKFFDLSDSDLQQ 104
           F   H+K YS  ED++RR+  + TN++K E +     +   T     NK+ D+++ + ++
Sbjct: 25  FKAKHNKTYSGDEDIIRRYI-WQTNLQKIEAHNELYAKGLSTYFLGENKYADMTNEEFRR 83

Query: 105 -LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            L+GL +D                     E+    F S    D LP A DWR EG +++V
Sbjct: 84  TLSGLRVDK--------------------ELTPGDFVSGMFKDSLPTAVDWRKEGYVTEV 123

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELS 196
           K+QG+C  CWAFS  G +E  H      L  LS
Sbjct: 124 KDQGQCGSCWAFSTTGSLEGQHFKATKQLVSLS 156


>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis]
 gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis]
          Length = 342

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 155/308 (50%), Gaps = 39/308 (12%)

Query: 183 AMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKF 242
           ++H    N   E+ +  + +VY    +  RR E F  NVE  E +    +      +N+F
Sbjct: 28  SLHDAAMNERHEMWMAKYGRVYKDNSEKERRFEIFRNNVEFIESFNKLGNRPYKLDINEF 87

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQA-PFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 301
            DL               T E+ + S      SS    TE  +F++ ++     +P + D
Sbjct: 88  ADL---------------TNEEFKVSKNGYKRSSGVGLTEKSSFRYANVTA---VPTSMD 129

Query: 302 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCN 359
           WR  G ++ +K+QG+C CCWAFSAV  +E +  +    L  LS Q+LVDCD S  + GC 
Sbjct: 130 WRQNGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDTSGEDQGCE 189

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG MDDA ++I  NGG+ ++  YPY+ ++    C   +      K+  Y  +P   E+ +
Sbjct: 190 GGLMDDAFEFIKQNGGLTTEANYPYQGTDGT--CNTNKAGNDAAKITGYEDVPANSEDAL 247

Query: 420 KKWVATRGPLSVGMNANG--LFYYSGGVI--DLNQRL--------YGTS---IPYWIVKN 464
            K VA++ P+SV ++A+G    +YSGGV   D    L        YGTS     YW+VKN
Sbjct: 248 LKAVASQ-PVSVAIDASGSAFQFYSGGVFTGDCGTELDHGVTAVGYGTSDDGTKYWLVKN 306

Query: 465 SWGSDWGE 472
           SWG+ WGE
Sbjct: 307 SWGTSWGE 314



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 95/168 (56%), Gaps = 19/168 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD S  + GC GG MDDA ++I  NGG+ ++  YPY+ ++ 
Sbjct: 160 ITKLSTGKLISLSEQELVDCDTSGEDQGCEGGLMDDAFEFIKQNGGLTTEANYPYQGTDG 219

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI- 604
              C   +      K+  Y  +P   E+ + K VA++ P+SV ++A+G    +YSGGV  
Sbjct: 220 T--CNTNKAGNDAAKITGYEDVPANSEDALLKAVASQ-PVSVAIDASGSAFQFYSGGVFT 276

Query: 605 -DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            D    L      +H +  VGYG  +  DGT   YW+VKNSWG+ WGE
Sbjct: 277 GDCGTEL------DHGVTAVGYGTSD--DGTK--YWLVKNSWGTSWGE 314



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)

Query: 21  MIKVALLESNIFQTRGYLNSPVTRFLN-----FMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           ++ VALL   ++ ++ +  S     +N     +M  + +VY    +  RR E F  NVE 
Sbjct: 9   LMFVALLVVGLWASQAWSRSLHDAAMNERHEMWMAKYGRVYKDNSEKERRFEIFRNNVEF 68

Query: 76  AEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA-PFSSNQTDTEM 134
            E + +  +     ++N+F DL++               E+ + S      SS    TE 
Sbjct: 69  IESFNKLGNRPYKLDINEFADLTN---------------EEFKVSKNGYKRSSGVGLTEK 113

Query: 135 RAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTE 194
            +F++ ++     +P + DWR  G ++ +K+QG+C CCWAFSAV  +E +  +    L  
Sbjct: 114 SSFRYANVTA---VPTSMDWRQNGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLIS 170

Query: 195 LSVQHHDKVYSSVED 209
           LS Q      +S ED
Sbjct: 171 LSEQELVDCDTSGED 185


>gi|242081867|ref|XP_002445702.1| hypothetical protein SORBIDRAFT_07g024430 [Sorghum bicolor]
 gi|241942052|gb|EES15197.1| hypothetical protein SORBIDRAFT_07g024430 [Sorghum bicolor]
          Length = 372

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 141/281 (50%), Gaps = 34/281 (12%)

Query: 209 DLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPS 268
           D  RR   F  NV    D+   D    +  +N+F D++  + ++    +  +     +  
Sbjct: 62  DKARRFNVFKENVRLIHDFNQRDEPYKLR-LNRFGDMTADEFRRHYAGSRVAHHRMFRGD 120

Query: 269 LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGV 328
            Q   SS         F +   R   DLP + DWR +G ++ VK+QG+C  CWAFS +  
Sbjct: 121 RQGSASS---------FMYAGAR---DLPTSVDWRQKGAVTDVKDQGQCGSCWAFSTIAA 168

Query: 329 VEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKAS 387
           VE ++AI+  +LT LS QQLVDCD   N GC+GG MD A QYI  +GGV ++ AYPYKA 
Sbjct: 169 VEGINAIKTKNLTSLSEQQLVDCDTKGNAGCDGGLMDYAFQYIAKHGGVAAEDAYPYKAR 228

Query: 388 ESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG---LFYYSG- 443
           ++       +     V +  Y  +P  +E  +KK VA + P+SV + A+G    FY  G 
Sbjct: 229 QAS----CKKSPAPAVTIDGYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGV 283

Query: 444 -----------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
                      GV  +   +      YW+VKNSWG +WGEK
Sbjct: 284 FAGRCGTELDHGVTAVGYGVAADGTKYWVVKNSWGPEWGEK 324



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +    L+ L+ ++LVDCD   N GC+GG MD A QYI  +GGV ++ AYPYKA ++ 
Sbjct: 172 INAIKTKNLTSLSEQQLVDCDTKGNAGCDGGLMDYAFQYIAKHGGVAAEDAYPYKARQAS 231

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
                 +     V +  Y  +P  +E  +KK VA + P+SV + A+G    +YS GV   
Sbjct: 232 ----CKKSPAPAVTIDGYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGVF-- 284

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  +  +H +  VGYG     DGT   YW+VKNSWG +WGEK
Sbjct: 285 -AGRCGTEL-DHGVTAVGYG--VAADGTK--YWVVKNSWGPEWGEK 324



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R    V   + D  RR   F  NV    D+ + D    +  +N+F D++  + ++    +
Sbjct: 51  RGRHAVARDLGDKARRFNVFKENVRLIHDFNQRDEPYKL-RLNRFGDMTADEFRRHYAGS 109

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             +     +   Q   SS         F +   R   DLP + DWR +G ++ VK+QG+C
Sbjct: 110 RVAHHRMFRGDRQGSASS---------FMYAGAR---DLPTSVDWRQKGAVTDVKDQGQC 157

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS +  VE ++AI+  NLT LS Q
Sbjct: 158 GSCWAFSTIAAVEGINAIKTKNLTSLSEQ 186


>gi|156546466|ref|XP_001607324.1| PREDICTED: hypothetical protein LOC100123649 [Nasonia vitripennis]
          Length = 1036

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 149/297 (50%), Gaps = 45/297 (15%)

Query: 200  HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
            + K+Y + E+   R + F  N+   E+ Q  + GT  +GV +F DL++++ +    L L 
Sbjct: 738  YKKMYHNKEEKEMRFQIFKDNLNLIEELQRNEMGTGRYGVTQFTDLTKAEFK-ARHLGLK 796

Query: 260  STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
             TL+            ++ D  M       +    +LP  +DWR   V++ VK+QG C  
Sbjct: 797  PTLK------------SENDIPMPMATIPDI----ELPSDYDWRHHNVVTPVKDQGSCGS 840

Query: 320  CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
            CWAFS  G +E  +AI+   L  LS Q+LVDCD  + GCNGG  D A + I + GG+  +
Sbjct: 841  CWAFSVTGNIEGQYAIKHGELLSLSEQELVDCDKLDSGCNGGLPDTAYRAIEELGGLELE 900

Query: 380  QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY-GEEEEMKKWVATRGPLSVGMNANGL 438
              YPY A + +  C   +    KVKV   S +     E +M +W+   GP+S+G+NAN +
Sbjct: 901  SDYPYDAEDEK--CHFNKN---KVKVNIVSGLNITSNETQMAQWLVKNGPMSIGINANAM 955

Query: 439  FYYSGGVIDLNQRL--------------YGT--------SIPYWIVKNSWGSDWGEK 473
             +Y GGV    + L              YG         ++PYWI+KNSWG  WGE+
Sbjct: 956  QFYMGGVSHPFKFLCSPDSLDHGVLIVGYGVKFYPIFKKTMPYWIIKNSWGPRWGEQ 1012



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 13/161 (8%)

Query: 497  KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
            +L  L+ ++LVDCD  + GCNGG  D A + I + GG+  +  YPY A + +  C   + 
Sbjct: 860  ELLSLSEQELVDCDKLDSGCNGGLPDTAYRAIEELGGLELESDYPYDAEDEK--CHFNKN 917

Query: 557  EGFKVKVKEYSRIPY-GEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
               KVKV   S +     E +M +W+   GP+S+G+NAN + +Y GGV    + LC+P +
Sbjct: 918  ---KVKVNIVSGLNITSNETQMAQWLVKNGPMSIGINANAMQFYMGGVSHPFKFLCSPDS 974

Query: 616  QNHALIIVGYGEE----EKKDGTSIPYWIVKNSWGSDWGEK 652
             +H ++IVGYG +     KK   ++PYWI+KNSWG  WGE+
Sbjct: 975  LDHGVLIVGYGVKFYPIFKK---TMPYWIIKNSWGPRWGEQ 1012



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  FM  + K+Y + E+   R + F  N+   E+ QR + GT  + V +F DL+ ++ + 
Sbjct: 731 FHEFMGKYKKMYHNKEEKEMRFQIFKDNLNLIEELQRNEMGTGRYGVTQFTDLTKAEFK- 789

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              L L  TL+            ++ D  M       +    +LP  +DWR   V++ VK
Sbjct: 790 ARHLGLKPTLK------------SENDIPMPMATIPDI----ELPSDYDWRHHNVVTPVK 833

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFS  G +E  +AI+   L  LS Q
Sbjct: 834 DQGSCGSCWAFSVTGNIEGQYAIKHGELLSLSEQ 867


>gi|194352750|emb|CAQ00103.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326514262|dbj|BAJ92281.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519402|dbj|BAJ96700.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326524351|dbj|BAK00559.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531998|dbj|BAK01375.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 356

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/300 (35%), Positives = 160/300 (53%), Gaps = 38/300 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K Y+S E+ L R E F  N++  +    E + +   G+N+F DL+  + +
Sbjct: 48  LFEKWLAKHQKAYASFEEKLHRFEVFKDNLKHIDKINREVT-SYWLGLNEFADLTHDEFK 106

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
               L LD+          AP     +    R+F++  +    DLP++ DWR +G +++V
Sbjct: 107 AAY-LGLDA----------APARRGSS----RSFRYEDVS-ASDLPKSVDWRKKGAVTEV 150

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYI 370
           K QG+C  CWAFS V  VE ++AI   +LT LS Q+L+DC +  N GCNGG MD A  YI
Sbjct: 151 KNQGQCGSCWAFSTVAAVEGINAIVTGNLTALSEQELIDCSVDGNSGCNGGLMDYAFSYI 210

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEE-EGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
             +GG+ +++AYPY   E    C  G++ E   V +  Y  +P  +E+ + K +A + P+
Sbjct: 211 ASSGGLHTEEAYPYLMEEGS--CGDGKKAESEAVTISGYEDVPANDEQALIKALAHQ-PV 267

Query: 430 SVGMNANG--LFYYSGGVID------LNQRLY--------GTSIPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV D      L+  +         G    Y IV+NSWG+ WGEK
Sbjct: 268 SVAIEASGRHFQFYSGGVFDGPCGAQLDHGVAAVGYGSDKGKGHDYIIVRNSWGAQWGEK 327



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 95/167 (56%), Gaps = 14/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DC +  N GCNGG MD A  YI  +GG+ +++AYPY   E  
Sbjct: 171 INAIVTGNLTALSEQELIDCSVDGNSGCNGGLMDYAFSYIASSGGLHTEEAYPYLMEEGS 230

Query: 549 RGCLVGEE-EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
             C  G++ E   V +  Y  +P  +E+ + K +A + P+SV + A+G    +YSGGV D
Sbjct: 231 --CGDGKKAESEAVTISGYEDVPANDEQALIKALAHQ-PVSVAIEASGRHFQFYSGGVFD 287

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H +  VGYG ++   G    Y IV+NSWG+ WGEK
Sbjct: 288 ---GPCGAQL-DHGVAAVGYGSDK---GKGHDYIIVRNSWGAQWGEK 327



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 17/157 (10%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V  F  ++  H K Y+S E+ L R E F  N++  +   RE + +    +N+F DL+  +
Sbjct: 46  VELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKHIDKINREVT-SYWLGLNEFADLTHDE 104

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +    L LD+          AP     +    R+F++  +    DLP++ DWR +G ++
Sbjct: 105 FKAAY-LGLDA----------APARRGSS----RSFRYEDVS-ASDLPKSVDWRKKGAVT 148

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +VK QG+C  CWAFS V  VE ++AI   NLT LS Q
Sbjct: 149 EVKNQGQCGSCWAFSTVAAVEGINAIVTGNLTALSEQ 185


>gi|40806498|gb|AAR92154.1| putative cysteine protease 1 [Iris x hollandica]
          Length = 340

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 149/293 (50%), Gaps = 42/293 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H +VY +  +   R E F  NVE+ E + +E+    + GVN+F DL+  + +     
Sbjct: 45  MAQHGRVYKNAAEKAHRFEIFRANVERIESFNAENHKFKL-GVNQFADLTNEEFK----- 98

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T   ++PS  A           ++F++ ++     +P   DWR +G ++ +K+QG+
Sbjct: 99  ----TRNTLKPSKMA---------STKSFKYENVTA---VPATMDWRTKGAVTPIKDQGQ 142

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C  CWAFSAV   E +  +    L  LS Q++VDCD++  + GCNGG MDDA +YII N 
Sbjct: 143 CGSCWAFSAVAATEGITKLSTGKLISLSEQEVVDCDVTSDDQGCNGGEMDDAFEYIIKNK 202

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPYKA++    C   +       +  Y  +    E  + K  A + P++V ++
Sbjct: 203 GITTEANYPYKAADGT--CNTKKAASHAASITGYEDVTVNSEAALLKAAANQ-PIAVAID 259

Query: 435 ANGLFY--YSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           A    +  YS GV       DL+  +    YG +     YW+VKNSWG+ WGE
Sbjct: 260 AGDFAFQMYSSGVFTGDCGTDLDHGVTLVGYGATSDGTKYWLVKNSWGTSWGE 312



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 19/168 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ +++VDCD++  + GCNGG MDDA +YII N G+ ++  YPYKA++ 
Sbjct: 158 ITKLSTGKLISLSEQEVVDCDVTSDDQGCNGGEMDDAFEYIIKNKGITTEANYPYKAADG 217

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVI- 604
              C   +       +  Y  +    E  + K  A + P++V ++A    +  YS GV  
Sbjct: 218 T--CNTKKAASHAASITGYEDVTVNSEAALLKAAANQ-PIAVAIDAGDFAFQMYSSGVFT 274

Query: 605 -DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            D    L      +H + +VGYG     DGT   YW+VKNSWG+ WGE
Sbjct: 275 GDCGTDL------DHGVTLVGYG--ATSDGT--KYWLVKNSWGTSWGE 312



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)

Query: 12  KGLGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVT 71
           K L  L   ++ +   +    ++ G   S + R   +M  H +VY +  +   R E F  
Sbjct: 8   KLLPALALLIVAIWASQGEAGRSLGENKSMLERHEQWMAQHGRVYKNAAEKAHRFEIFRA 67

Query: 72  NVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTD 131
           NVE+ E +  E+    +  VN+F DL++ + +         T   ++PS  A        
Sbjct: 68  NVERIESFNAENHKFKL-GVNQFADLTNEEFK---------TRNTLKPSKMA-------- 109

Query: 132 TEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNN 191
              ++F++ ++     +P   DWR +G ++ +K+QG+C  CWAFSAV   E +  +    
Sbjct: 110 -STKSFKYENVTA---VPATMDWRTKGAVTPIKDQGQCGSCWAFSAVAATEGITKLSTGK 165

Query: 192 LTELSVQ 198
           L  LS Q
Sbjct: 166 LISLSEQ 172


>gi|378943060|gb|AFC76271.1| cathepsin L-like protease [Leishmania major]
          Length = 348

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYTSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   +   C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYTSGNGDVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q 
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQ 177


>gi|357446979|ref|XP_003593765.1| Cysteine proteinase [Medicago truncatula]
 gi|355482813|gb|AES64016.1| Cysteine proteinase [Medicago truncatula]
          Length = 364

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 153/308 (49%), Gaps = 39/308 (12%)

Query: 181 VEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVN 240
           VE     + N+  E     +DK+     +L +R   F  N+E  E++ +  + +   G+N
Sbjct: 54  VENEAKYETNSAFEFKATQNDKI----SELEKRKRIFKNNLEYIENFNNAGNKSYKLGLN 109

Query: 241 KFFDLSESD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEA 299
           ++ DL+  + L   TGL +   L           SS++  +    F  N     DD+P  
Sbjct: 110 QYSDLTSDEFLASHTGLKVSKQL-----------SSSKMRSAAVPFNLN-----DDVPTN 153

Query: 300 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCN 359
           FDWR +G ++ VK+QG C CCWAFS V  VE    I    L  LS QQLVDCD  N GC+
Sbjct: 154 FDWRQQGAVTDVKDQGSCGCCWAFSVVAAVEGAVKINTGELISLSEQQLVDCDERNSGCH 213

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG MD A +YII   G+VS+  YPY+  E  + C + ++  F+ ++  +  +P   +E+ 
Sbjct: 214 GGNMDSAFKYIIQK-GIVSEADYPYQ--EGSQTCQLNDQMKFEAQITNFIDVP-ANDEQQ 269

Query: 420 KKWVATRGPLSVGMNANGLF-YYSGGVI------DLNQRL----YGTS---IPYWIVKNS 465
                 + P+SVG+     F +Y G V        +N  +    YG S     YW++KNS
Sbjct: 270 LLQAVAQQPVSVGIEVGDEFQHYMGDVYSGTCGQSMNHAVTAVGYGVSEDGTKYWLIKNS 329

Query: 466 WGSDWGEK 473
           WG  WGE+
Sbjct: 330 WGKGWGEE 337



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 89/156 (57%), Gaps = 11/156 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCD  N GC+GG MD A +YII   G+VS+  YPY+  E  + C + ++
Sbjct: 193 ELISLSEQQLVDCDERNSGCHGGNMDSAFKYIIQK-GIVSEADYPYQ--EGSQTCQLNDQ 249

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
             F+ ++  +  +P   +E+       + P+SVG+     F +  G  D+    C  ++ 
Sbjct: 250 MKFEAQITNFIDVP-ANDEQQLLQAVAQQPVSVGIEVGDEFQHYMG--DVYSGTCG-QSM 305

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           NHA+  VGYG  E  DGT   YW++KNSWG  WGE+
Sbjct: 306 NHAVTAVGYGVSE--DGTK--YWLIKNSWGKGWGEE 337



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 17/142 (11%)

Query: 59  VEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL-SDSDLQQLTGLNLDSTLEDI 117
           + +L +R   F  N+E  E++    + +    +N++ DL SD  L   TGL +   L   
Sbjct: 76  ISELEKRKRIFKNNLEYIENFNNAGNKSYKLGLNQYSDLTSDEFLASHTGLKVSKQL--- 132

Query: 118 QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSA 177
                   SS++  +    F  N     DD+P  FDWR +G ++ VK+QG C CCWAFS 
Sbjct: 133 --------SSSKMRSAAVPFNLN-----DDVPTNFDWRQQGAVTDVKDQGSCGCCWAFSV 179

Query: 178 VGVVEAMHAIQGNNLTELSVQH 199
           V  VE    I    L  LS Q 
Sbjct: 180 VAAVEGAVKINTGELISLSEQQ 201


>gi|15824691|gb|AAL09443.1| cysteine protease [Leishmania donovani]
          Length = 443

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 177/375 (47%), Gaps = 47/375 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN--GGVV 377
           CWAFSAVG +E+  A  G+ L  LS QQLV CD  + GCNGG M  A ++++ +  G V 
Sbjct: 150 CWAFSAVGNIESQWARVGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   CL   +     ++  Y  IP   E  M  W+A  GP+++ ++A+
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDAS 268

Query: 437 GLFYYSGGVID------LNQ--RLYGTS----IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN    L G +    +PYW++KNSWG DWGEK  V   +G + 
Sbjct: 269 SFMSYQSGVLTSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVAMGKNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM-SNGGCNGGRMDDALQYI 528
               +  ++  +P  L+             R+  E+++  DM    GC    +   + Y 
Sbjct: 329 CLLSEYPVSAHVPRSLTPGPGTESEERAPKRVTVEQVMCTDMYCREGCKKSLLTANVCYK 388

Query: 529 IDNGGVVSDQAYPYK 543
              GG    +  P K
Sbjct: 389 NGGGGSSMTKCGPKK 403



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L  L+ ++LV CD  + GCNGG M  A ++++ +  G V ++++YPY +   +   CL  
Sbjct: 170 LVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNS 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +     ++  Y  IP   E  M  W+A  GP+++ ++A+    Y  GV+      C   
Sbjct: 230 SKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDASSFMSYQSGVLTS----CAGD 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A NH +++VGY     K G  +PYW++KNSWG DWGEK
Sbjct: 285 ALNHGVLLVGY----NKTG-GVPYWVIKNSWGEDWGEK 317



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG C  CWAFSAVG +E+  A  G+ L  LS Q 
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWARVGHGLVSLSEQQ 177


>gi|91085677|ref|XP_971867.1| PREDICTED: similar to cathepsin L-like protein; cysteine proteinase
           [Tribolium castaneum]
 gi|270011032|gb|EFA07480.1| cathepsin L precursor [Tribolium castaneum]
          Length = 329

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 142/293 (48%), Gaps = 36/293 (12%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG---TAVFGVNKFFDLSESDLQQLT 254
           Q H + +   ++   R   F   +++ ED+         T   G+NKF D ++ +L   T
Sbjct: 28  QKHGRNFLFSKEEFFRKSLFQKKLQEIEDHNERYRKGLETYEMGINKFSDYTDDELFSYT 87

Query: 255 -GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
            GL L S L    P      S N T +  RA           LP +FDWR+ GVI+ VK 
Sbjct: 88  HGLQLPSEL----PEPIIKISPNATLSLSRA----------GLPSSFDWRSRGVITPVKN 133

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN 373
           Q  C  CWAFS  G +EA + I+  S+  LS QQLVDC     GC GG M DA  YI  N
Sbjct: 134 QRNCGSCWAFSTNGALEAHYKIRRGSVVTLSEQQLVDCVRQAFGCRGGWMTDAYMYIARN 193

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+  D+ YPYKAS    G    +    KV ++ Y+ +    EE +K  V T+GP+SV +
Sbjct: 194 GGINLDRNYPYKASA---GPCRFQASKPKVTIRGYAYLTGPNEEMLKHMVVTQGPVSVAI 250

Query: 434 NANGLFYYSGGVIDLNQRL-------------YG--TSIPYWIVKNSWGSDWG 471
           +A+G F   GG +  N                YG      YW+VKNSWG DWG
Sbjct: 251 DASGRFASYGGGVYYNPSCARNKFTHAVVIVGYGRENGQDYWLVKNSWGRDWG 303



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 85/150 (56%), Gaps = 9/150 (6%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ ++LVDC     GC GG M DA  YI  NGG+  D+ YPYKAS    G    +    K
Sbjct: 163 LSEQQLVDCVRQAFGCRGGWMTDAYMYIARNGGINLDRNYPYKASA---GPCRFQASKPK 219

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           V ++ Y+ +    EE +K  V T+GP+SV ++A+G F   GG +  N   C      HA+
Sbjct: 220 VTIRGYAYLTGPNEEMLKHMVVTQGPVSVAIDASGRFASYGGGVYYNPS-CARNKFTHAV 278

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
           +IVGYG E  +D     YW+VKNSWG DWG
Sbjct: 279 VIVGYGRENGQD-----YWLVKNSWGRDWG 303



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 18/157 (11%)

Query: 47  NFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY-QREDSGTAVFE--VNKFFDLSDSDLQ 103
           NF + H + +   ++   R   F   +++ ED+ +R   G   +E  +NKF D +D +L 
Sbjct: 25  NFKQKHGRNFLFSKEEFFRKSLFQKKLQEIEDHNERYRKGLETYEMGINKFSDYTDDELF 84

Query: 104 QLT-GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
             T GL L S L    P      S N T +  RA           LP +FDWR+ GVI+ 
Sbjct: 85  SYTHGLQLPSEL----PEPIIKISPNATLSLSRA----------GLPSSFDWRSRGVITP 130

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK Q  C  CWAFS  G +EA + I+  ++  LS Q 
Sbjct: 131 VKNQRNCGSCWAFSTNGALEAHYKIRRGSVVTLSEQQ 167


>gi|225448924|ref|XP_002266821.1| PREDICTED: cysteine proteinase 15A-like [Vitis vinifera]
          Length = 375

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 151/309 (48%), Gaps = 54/309 (17%)

Query: 195 LSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL- 253
           + ++ + K YSS E+ + R   F  N+ +A ++Q+ D  TA+ GV  F DLSE + +++ 
Sbjct: 63  MFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDP-TALHGVTPFSDLSEEEFERMF 121

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
           TG+         +P ++   +      E+           D LPE+FDWR +G +++VK 
Sbjct: 122 TGVVG-------RPHMKGGVAETAAALEV-----------DGLPESFDWREKGAVTEVKM 163

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNGGCNGGRMD 364
           QG C  CWAFS  G VE  H I    L  LS QQLVDCD           + GC GG M 
Sbjct: 164 QGTCGSCWAFSTTGAVEGAHFISTKKLLTLSEQQLVDCDHMCDIRDKTACDSGCEGGLMT 223

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
           +A +Y+I+ GG+  + +YPY     E  C   + +   V+V  ++ +P  E +     V 
Sbjct: 224 NAYKYLIEAGGLEEESSYPYTGKHGE--CKF-KPDRVAVRVVNFTEVPINENQIAANLVC 280

Query: 425 TRGPLSVGMNANGLFYYSGGV----------IDLNQRLYGTSI-----------PYWIVK 463
             GPL+VG+NA  +  Y GGV          I+    L G              PYWI+K
Sbjct: 281 -HGPLAVGLNAIFMQTYIGGVSCPLICPKRWINHGVLLVGYGAKGYSILRFGYKPYWIIK 339

Query: 464 NSWGSDWGE 472
           NSWG  WGE
Sbjct: 340 NSWGKRWGE 348



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 25/170 (14%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GC GG M +A +Y+I+ GG+  + +YPY     
Sbjct: 189 KLLTLSEQQLVDCDHMCDIRDKTACDSGCEGGLMTNAYKYLIEAGGLEEESSYPYTGKHG 248

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           E  C   + +   V+V  ++ +P  E +     V   GPL+VG+NA  +  Y GGV    
Sbjct: 249 E--CKF-KPDRVAVRVVNFTEVPINENQIAANLVC-HGPLAVGLNAIFMQTYIGGVS--C 302

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGE 651
             +C  +  NH +++VGYG +    G SI      PYWI+KNSWG  WGE
Sbjct: 303 PLICPKRWINHGVLLVGYGAK----GYSILRFGYKPYWIIKNSWGKRWGE 348



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 20/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  FM  + K YSS E+ + R   F  N+ +A ++Q  D  TA+  V  F DLS+ + ++
Sbjct: 61  FRMFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDP-TALHGVTPFSDLSEEEFER 119

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           + TG+         +P ++   +      E+           D LPE+FDWR +G +++V
Sbjct: 120 MFTGVVG-------RPHMKGGVAETAAALEV-----------DGLPESFDWREKGAVTEV 161

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS  G VE  H I    L  LS Q
Sbjct: 162 KMQGTCGSCWAFSTTGAVEGAHFISTKKLLTLSEQ 196


>gi|157864847|ref|XP_001681132.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124426|emb|CAJ02282.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 443

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 147/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +    ++      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAVKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 13/164 (7%)

Query: 492 GVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESER 549
            V   KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   + 
Sbjct: 164 AVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDV 223

Query: 550 G-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
             C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+    
Sbjct: 224 PECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS-- 280

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 281 --CIGEQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +    ++      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAVKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q 
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQ 177


>gi|73983670|ref|XP_540846.2| PREDICTED: cathepsin W [Canis lupus familiaris]
          Length = 374

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 169/354 (47%), Gaps = 72/354 (20%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            +++ YS+ E+  RR + F  N+ +A+  + ED GTA FGV  F DL+E +  Q  G   
Sbjct: 48  QYNRSYSNPEEYARRLDIFAHNLAQAQQLEDEDLGTAEFGVTPFSDLTEEEFGQFYGHQR 107

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA-EGVISKVKEQGKC 317
            +         +AP    + ++E           G+ +P   DWR   G+IS +K+QG C
Sbjct: 108 MAG--------EAPSVGRKVESE---------EWGEPVPPTCDWRKLPGIISPIKQQGNC 150

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
            CCWA +A G +EA+  I+ +   E+SVQ+L+DC     GC GG   DA   +++N G+ 
Sbjct: 151 RCCWAMAAAGNIEALWGIRYHQPVEVSVQELLDCGRCGDGCKGGFTWDAFITVLNNSGLA 210

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY--------GEEEEMKKWVATRGPL 429
           S + YP+  +     CL           K+Y ++ +        G E+ +  ++AT+GP+
Sbjct: 211 SAKDYPFLGNTKPHRCL----------AKKYKKVAWIQDFIMLQGNEQAIAWYLATKGPI 260

Query: 430 SVGMNANGLFYYSGGVIDLN------QRL--------YGTS------------------- 456
           +V +N   L +Y  GVI         QR+        +G S                   
Sbjct: 261 TVTINMKLLQHYQKGVIQATHTTCDPQRVDHSVLLVGFGKSKSVAGKQAEGGSSRPRPHH 320

Query: 457 -IPYWIVKNSWGSDWGEKVEDKVGSSGNRTRDLELTGVLPSKLSRLATEKLVDC 509
            IPYWI+KNSWG++WGE+   ++   GN T  +    V  +++     ++LV C
Sbjct: 321 PIPYWILKNSWGAEWGEEGYFRL-HRGNNTCGITKYPVT-ARVDLRVKKRLVSC 372



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 31/184 (16%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L G+   +   ++ ++L+DC     GC GG   DA   +++N G+ S + YP+  +    
Sbjct: 165 LWGIRYHQPVEVSVQELLDCGRCGDGCKGGFTWDAFITVLNNSGLASAKDYPFLGNTKPH 224

Query: 550 GCLVGEEEGFKVKVKEYSRIPY--------GEEEEMKKWVATRGPLSVGMNANGLFYYSG 601
            CL           K+Y ++ +        G E+ +  ++AT+GP++V +N   L +Y  
Sbjct: 225 RCLA----------KKYKKVAWIQDFIMLQGNEQAIAWYLATKGPITVTINMKLLQHYQK 274

Query: 602 GVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGT-------------SIPYWIVKNSWGSD 648
           GVI      C+P+  +H++++VG+G+ +   G               IPYWI+KNSWG++
Sbjct: 275 GVIQATHTTCDPQRVDHSVLLVGFGKSKSVAGKQAEGGSSRPRPHHPIPYWILKNSWGAE 334

Query: 649 WGEK 652
           WGE+
Sbjct: 335 WGEE 338



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 18/155 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F   +++ YS+ E+  RR + F  N+ +A+  + ED GTA F V  F DL++ +  Q
Sbjct: 42  FALFQIQYNRSYSNPEEYARRLDIFAHNLAQAQQLEDEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA-EGVISKV 163
             G    +         +AP    + ++E           G+ +P   DWR   G+IS +
Sbjct: 102 FYGHQRMAG--------EAPSVGRKVESE---------EWGEPVPPTCDWRKLPGIISPI 144

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C CCWA +A G +EA+  I+ +   E+SVQ
Sbjct: 145 KQQGNCRCCWAMAAAGNIEALWGIRYHQPVEVSVQ 179


>gi|196014793|ref|XP_002117255.1| hypothetical protein TRIADDRAFT_61245 [Trichoplax adhaerens]
 gi|190580220|gb|EDV20305.1| hypothetical protein TRIADDRAFT_61245 [Trichoplax adhaerens]
          Length = 353

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 155/294 (52%), Gaps = 40/294 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ ++K Y+++++L  R++ F  N+ +A  +Q  D+ T  +G  K  DL++ +++    +
Sbjct: 59  IKEYNKSYNNIQELNYRYQVFTKNMARAMLFQKHDNATGRYGFTKLSDLTDQEVKSFYAM 118

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                 + + P+ +A              Q NSL      P++FDWR++G ++ VK+Q +
Sbjct: 119 --KKWPQQLYPTKKANIP-----------QLNSL------PQSFDWRSKGAVTAVKDQKR 159

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN-GG 375
           C  CWAF+  G +E    +    L  LS Q+LVDCD  + GC GG   +A   I++  GG
Sbjct: 160 CGACWAFATTGNIEGQWYLNKGKLYSLSEQELVDCDKIDEGCKGGLPLNAYHSIMNRLGG 219

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + +++ YPY A   +  C + + E   V +    ++    E ++  W+   GP+++G+N+
Sbjct: 220 LETEKDYPYVAKNGK--CKLNKSEEV-VYINSSVKVS-TNETDLAAWLVAHGPVAIGINS 275

Query: 436 NGLFYYSGGVI-----DLNQRL---------YG--TSIPYWIVKNSWGSDWGEK 473
             + +Y GG+      D N +L         YG   S PYWI+KNSWG+DWGEK
Sbjct: 276 VNMLHYKGGIAHPTNKDCNPKLLDHGVLIVGYGEEKSTPYWIIKNSWGTDWGEK 329



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 10/157 (6%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN-GGVVSDQAYPYKASESERGCLVGE 555
           KL  L+ ++LVDCD  + GC GG   +A   I++  GG+ +++ YPY A   +  C + +
Sbjct: 182 KLYSLSEQELVDCDKIDEGCKGGLPLNAYHSIMNRLGGLETEKDYPYVAKNGK--CKLNK 239

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            E   V +    ++    E ++  W+   GP+++G+N+  + +Y GG+     + CNPK 
Sbjct: 240 SEEV-VYINSSVKVS-TNETDLAAWLVAHGPVAIGINSVNMLHYKGGIAHPTNKDCNPKL 297

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H ++IVGYGEE+     S PYWI+KNSWG+DWGEK
Sbjct: 298 LDHGVLIVGYGEEK-----STPYWIIKNSWGTDWGEK 329



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 81/154 (52%), Gaps = 19/154 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           +L F+++++K Y+++++L  R++ F  N+ +A  +Q+ D+ T  +   K  DL+D +++ 
Sbjct: 55  YLQFIKEYNKSYNNIQELNYRYQVFTKNMARAMLFQKHDNATGRYGFTKLSDLTDQEVKS 114

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              +      + + P+ +A              Q NSL      P++FDWR++G ++ VK
Sbjct: 115 FYAM--KKWPQQLYPTKKANIP-----------QLNSL------PQSFDWRSKGAVTAVK 155

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +Q +C  CWAF+  G +E    +    L  LS Q
Sbjct: 156 DQKRCGACWAFATTGNIEGQWYLNKGKLYSLSEQ 189


>gi|339896953|ref|XP_003392238.1| cathepsin L-like protease [Leishmania infantum JPCM5]
 gi|14349351|gb|AAC38832.2| cysteine protease [Leishmania chagasi]
 gi|17384031|emb|CAD12393.1| cysteine proteinase [Leishmania infantum]
 gi|321398984|emb|CBZ08377.1| cathepsin L-like protease [Leishmania infantum JPCM5]
          Length = 443

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 177/375 (47%), Gaps = 47/375 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN--GGVV 377
           CWAFSAVG +E+  A  G+ L  LS QQLV CD  + GCNGG M  A ++++ +  G V 
Sbjct: 150 CWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   CL   +     ++  Y  IP   E  M  W+A  GP+++ ++A+
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDAS 268

Query: 437 GLFYYSGGVID------LNQ--RLYGTS----IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN    L G +    +PYW++KNSWG DWGEK  V   +G + 
Sbjct: 269 SFMSYQSGVLTSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVVMGLNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM-SNGGCNGGRMDDALQYI 528
               +  ++  +P  L+             R+  E+++  DM    GC    +   + Y 
Sbjct: 329 CLLSEYPVSAHVPRSLTPGPGTESEERAPKRVTVEQMMCTDMYCREGCKKSLLTANVCYK 388

Query: 529 IDNGGVVSDQAYPYK 543
              GG    +  P K
Sbjct: 389 NGGGGSSMTKCGPQK 403



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L  L+ ++LV CD  + GCNGG M  A ++++ +  G V ++++YPY +   +   CL  
Sbjct: 170 LVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNS 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +     ++  Y  IP   E  M  W+A  GP+++ ++A+    Y  GV+      C   
Sbjct: 230 SKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDASSFMSYQSGVLTS----CAGD 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A NH +++VGY     K G  +PYW++KNSWG DWGEK
Sbjct: 285 ALNHGVLLVGY----NKTG-GVPYWVIKNSWGEDWGEK 317



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG C  CWAFSAVG +E+  A  G+ L  LS Q 
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQ 177


>gi|297792329|ref|XP_002864049.1| hypothetical protein ARALYDRAFT_495086 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309884|gb|EFH40308.1| hypothetical protein ARALYDRAFT_495086 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 361

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 155/291 (53%), Gaps = 35/291 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGLNL 258
           H  +  S+E+  +R   F  NV+   +   +++   +  +NKF D++  + ++   G N+
Sbjct: 44  HHTIARSLEEKAKRFNVFKHNVKHIHETNKKENSYKL-KLNKFGDMTSEEFRRTYAGSNI 102

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                         F   +  T  ++F + ++   D LP + DWR  G ++ VK QG+C 
Sbjct: 103 KH---------HRMFQGERQTT--KSFMYANV---DTLPTSVDWRKNGAVTPVKNQGQCG 148

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVV 377
            CWAFS V  VE ++ I+   LT LS Q+LVDCD + N GCNGG MD A ++I + GG+ 
Sbjct: 149 SCWAFSTVVAVEGINQIRTKKLTSLSEQELVDCDTNKNQGCNGGLMDLAFEFIKEKGGLT 208

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           S+  YPYKAS+    C   +E    V +  +  +P   E ++ K VA + P+SV ++A G
Sbjct: 209 SELVYPYKASDET--CDTNKENAPVVSIDGHEDVPKNSEVDLMKAVAHQ-PVSVAIDAGG 265

Query: 438 --LFYYSGGVI------DLNQRL----YGTSI---PYWIVKNSWGSDWGEK 473
               +YS GV       +LN  +    YGT+I    YWIVKNSWG +WGEK
Sbjct: 266 SDFQFYSEGVFTGRCGTELNHGVAVVGYGTTIDGTKYWIVKNSWGEEWGEK 316



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 94/163 (57%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   KL+ L+ ++LVDCD + N GCNGG MD A ++I + GG+ S+  YPYKAS+    C
Sbjct: 165 IRTKKLTSLSEQELVDCDTNKNQGCNGGLMDLAFEFIKEKGGLTSELVYPYKASDET--C 222

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              +E    V +  +  +P   E ++ K VA + P+SV ++A G    +YS GV      
Sbjct: 223 DTNKENAPVVSIDGHEDVPKNSEVDLMKAVAHQ-PVSVAIDAGGSDFQFYSEGVF---TG 278

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  NH + +VGYG     DGT   YWIVKNSWG +WGEK
Sbjct: 279 RCGTEL-NHGVAVVGYG--TTIDGTK--YWIVKNSWGEEWGEK 316



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 16/150 (10%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL-TGL 108
           + H  +  S+E+  +R   F  NV+   +  ++++   + ++NKF D++  + ++   G 
Sbjct: 42  KSHHTIARSLEEKAKRFNVFKHNVKHIHETNKKENSYKL-KLNKFGDMTSEEFRRTYAGS 100

Query: 109 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 168
           N+              F   +  T  ++F + ++   D LP + DWR  G ++ VK QG+
Sbjct: 101 NIKH---------HRMFQGERQTT--KSFMYANV---DTLPTSVDWRKNGAVTPVKNQGQ 146

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           C  CWAFS V  VE ++ I+   LT LS Q
Sbjct: 147 CGSCWAFSTVVAVEGINQIRTKKLTSLSEQ 176


>gi|240255643|ref|NP_567010.5| Papain family cysteine protease [Arabidopsis thaliana]
 gi|17979125|gb|AAL49820.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332645795|gb|AEE79316.1| Papain family cysteine protease [Arabidopsis thaliana]
          Length = 367

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/309 (33%), Positives = 154/309 (49%), Gaps = 51/309 (16%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
            L +  + K YS+ E+ + R   F  NV KA ++Q  D  +AV GV +F DL+E + +++
Sbjct: 52  RLFMSDYGKNYSTREEYIHRLGIFAKNVLKAAEHQMMDP-SAVHGVTQFSDLTEEEFKRM 110

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                 + + D+  S      +     E+           D LPE FDWR +G +++VK 
Sbjct: 111 Y-----TGVADVGGSRGGTVGAEAPMVEV-----------DGLPEDFDWREKGGVTEVKN 154

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMD 364
           QG C  CWAFS  G  E  H +    L  LS QQLVDCD +         + GC GG M 
Sbjct: 155 QGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQLVDCDQACDPKDKKACDNGCGGGLMT 214

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
           +A +Y+++ GG+  +++YPY     +RG    + E   V+V  ++ IP  +E ++   + 
Sbjct: 215 NAYEYLMEAGGLEEERSYPYTG---KRGHCKFDPEKVAVRVLNFTTIPL-DENQIAANLV 270

Query: 425 TRGPLSVGMNANGLFYYSGGVI--------DLNQRLY-------GTSI------PYWIVK 463
             GPL+VG+NA  +  Y GGV         ++N  +        G SI      PYWI+K
Sbjct: 271 RHGPLAVGLNAVFMQTYIGGVSCPLICSKRNVNHGVLLVGYGSKGFSILRLSNKPYWIIK 330

Query: 464 NSWGSDWGE 472
           NSWG  WGE
Sbjct: 331 NSWGKKWGE 339



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 25/174 (14%)

Query: 493 VLPSKLSRLATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 543
           V   KL  L+ ++LVDCD +         + GC GG M +A +Y+++ GG+  +++YPY 
Sbjct: 176 VSTGKLLSLSEQQLVDCDQACDPKDKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPYT 235

Query: 544 ASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV 603
               +RG    + E   V+V  ++ IP  +E ++   +   GPL+VG+NA  +  Y GGV
Sbjct: 236 G---KRGHCKFDPEKVAVRVLNFTTIPL-DENQIAANLVRHGPLAVGLNAVFMQTYIGGV 291

Query: 604 IDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGE 651
                 +C+ +  NH +++VGYG +    G SI      PYWI+KNSWG  WGE
Sbjct: 292 S--CPLICSKRNVNHGVLLVGYGSK----GFSILRLSNKPYWIIKNSWGKKWGE 339



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 17/157 (10%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  FM D+ K YS+ E+ + R   F  NV KA ++Q  D  +AV  V +F DL++ + 
Sbjct: 49  SKFRLFMSDYGKNYSTREEYIHRLGIFAKNVLKAAEHQMMDP-SAVHGVTQFSDLTEEEF 107

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +++      + + D+  S      +     E+           D LPE FDWR +G +++
Sbjct: 108 KRMY-----TGVADVGGSRGGTVGAEAPMVEV-----------DGLPEDFDWREKGGVTE 151

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK QG C  CWAFS  G  E  H +    L  LS Q 
Sbjct: 152 VKNQGACGSCWAFSTTGAAEGAHFVSTGKLLSLSEQQ 188


>gi|15824693|gb|AAL09444.1| cysteine protease [Leishmania donovani]
          Length = 394

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 163/328 (49%), Gaps = 33/328 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN--GGVV 377
           CWAFSAVG +E+  A  G+ L  LS QQLV CD  + GCNGG M  A ++++ +  G V 
Sbjct: 150 CWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   CL   +     ++  Y  IP   E  M  W+A  GP+++G++A+
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGARIDGYVMIP-SNETVMAAWLAENGPIAIGVDAS 268

Query: 437 GLFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN  +    Y T+  +PY ++KNSWG DWGEK  V   +G + 
Sbjct: 269 SFMSYQSGVLTSCAGDALNHGVLLVGYNTTGGVPYCVIKNSWGEDWGEKGYVRVAMGLNA 328

Query: 483 NRTRDLELTGVLPSKLSRLATEKLVDCD 510
               +  ++  +P  L+   T     C+
Sbjct: 329 CLLSEYPVSAHVPQSLTPALTASGNFCE 356



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L  L+ ++LV CD  + GCNGG M  A ++++ +  G V ++++YPY +   +   CL  
Sbjct: 170 LVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNS 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +     ++  Y  IP   E  M  W+A  GP+++G++A+    Y  GV+      C   
Sbjct: 230 SKLVPGARIDGYVMIP-SNETVMAAWLAENGPIAIGVDASSFMSYQSGVLTS----CAGD 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A NH +++VGY          +PY ++KNSWG DWGEK
Sbjct: 285 ALNHGVLLVGYNTT-----GGVPYCVIKNSWGEDWGEK 317



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG C  CWAFSAVG +E+  A  G+ L  LS Q 
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQ 177


>gi|378943048|gb|AFC76265.1| cathepsin L-like protease [Leishmania major]
          Length = 348

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 145/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  RR  NF  N+E   ++Q+ +   A FG+ KFFDLSE+       LN  
Sbjct: 45  YQRAYGTLTEEQRRLANFERNLELMREHQARNP-HARFGITKFFDLSEAVFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   +   C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 16/163 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  RR  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQRRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS++       LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAVFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQ 176


>gi|109390302|gb|ABG33750.1| cysteine protease [Hevea brasiliensis]
          Length = 457

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/288 (36%), Positives = 148/288 (51%), Gaps = 34/288 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+S+ +  RR E F  N+   +++ SE+  T   G+N+F DL+  + + +      
Sbjct: 49  HGKAYNSLGEKERRFEVFKDNLRFIDEHNSENR-TYRVGLNRFADLTNEEYRSM----YL 103

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
             L  I+ +     S   T            R GD LP++ DWR EG +  VK+QG C  
Sbjct: 104 GALSGIRRNKLRKISDRYTP-----------RVGDSLPDSVDWRKEGAVVGVKDQGSCGS 152

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFSAV  VE ++ I    L  LS Q+LVDCD S N GCNGG MD   ++II+NGG+ S
Sbjct: 153 CWAFSAVAAVEGINKIVTGDLISLSEQELVDCDNSYNEGCNGGLMDYGFEFIINNGGIDS 212

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           ++ YPY A +    C    +    V +  Y  +P   E  ++K VA + P+SV + A G 
Sbjct: 213 EEDYPYLARDGR--CDTYRKNARVVSIDSYEDVPVNNEAALQKAVANQ-PVSVAIEAGGR 269

Query: 439 FY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            +  YS GV        L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 270 DFQLYSSGVFSGRCGTALDHGVVAVGYGTENGQDYWIVRNSWGKSWGE 317



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 91/169 (53%), Gaps = 15/169 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD   ++II+NGG+ S++ YPY A +  
Sbjct: 165 INKIVTGDLISLSEQELVDCDNSYNEGCNGGLMDYGFEFIINNGGIDSEEDYPYLARDGR 224

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P   E  ++K VA + P+SV + A G  +  YS GV   
Sbjct: 225 --CDTYRKNARVVSIDSYEDVPVNNEAALQKAVANQ-PVSVAIEAGGRDFQLYSSGVF-- 279

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               C   A +H ++ VGYG E  +D     YWIV+NSWG  WGE   L
Sbjct: 280 -SGRCG-TALDHGVVAVGYGTENGQD-----YWIVRNSWGKSWGESGYL 321



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 16/154 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++  H K Y+S+ +  RR E F  N+   +++  E+  T    +N+F DL++ + + 
Sbjct: 42  YEDWLVKHGKAYNSLGEKERRFEVFKDNLRFIDEHNSENR-TYRVGLNRFADLTNEEYRS 100

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +        L  I+ +     S   T            R GD LP++ DWR EG +  VK
Sbjct: 101 M----YLGALSGIRRNKLRKISDRYTP-----------RVGDSLPDSVDWRKEGAVVGVK 145

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAV  VE ++ I   +L  LS Q
Sbjct: 146 DQGSCGSCWAFSAVAAVEGINKIVTGDLISLSEQ 179


>gi|332326583|gb|AEE42615.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 172/344 (50%), Gaps = 54/344 (15%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL--QQLTGLNLD 259
           +VY +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++   + L G    
Sbjct: 47  RVYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARYLNG---- 101

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQGKC 317
                      A F++     +  A Q +     D   +P+A DWR +G ++ VK+QG C
Sbjct: 102 ----------AAYFAA----AKQHAGQHHRKARADLSAVPDAVDWREKGAVTPVKDQGAC 147

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGG 375
             CWAFSAVG +E+  A+  + L  LS QQLV CD  + GCNGG M  A ++++   NG 
Sbjct: 148 GSCWAFSAVGNIESQWAVADHRLXXLSEQQLVSCDDKDSGCNGGLMTQAFEWLLRNMNGT 207

Query: 376 VVSDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           ++++ +YPY +S  +   C    +     ++  Y  I    E  M  W+A  GP+S+ ++
Sbjct: 208 MLTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIE-SSETVMAAWLAKSGPISIAVD 266

Query: 435 ANGLFYYSGGVID------LNQ--RLYGTS----IPYWIVKNSWGSDWGEK--VEDKVGS 480
           A+    Y  GV+       LN    L G +    +PYW++KNSWG DWGEK  V   +G 
Sbjct: 267 ASSFMSYESGVLTSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 481 SGNRTRDLELTGVLPSKLS-------------RLATEKLVDCDM 511
           +     +  ++  +P  L+             R+  E+++  DM
Sbjct: 327 NACLLTEYPVSAHVPQSLAPGPSTESEERAPKRVMVEQVICTDM 370



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L  L+ ++LV CD  + GCNGG M  A ++++ N  G ++++ +YPY +S  +   C  
Sbjct: 169 RLXXLSEQQLVSCDDKDSGCNGGLMTQAFEWLLRNMNGTMLTEDSYPYVSSTGDVPECTN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             +     ++  Y  I    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSQLVPGARIDGYVTIE-SSETVMAAWLAKSGPISIAVDASSFMSYESGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            A NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 DALNHGVLLVGYNRTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 24/168 (14%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + +VY +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDL--QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEA 151
           DLS+++   + L G               A F++     +  A Q +     D   +P+A
Sbjct: 88  DLSEAEFAARYLNG--------------AAYFAA----AKQHAGQHHRKARADLSAVPDA 129

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            DWR +G ++ VK+QG C  CWAFSAVG +E+  A+  + L  LS Q 
Sbjct: 130 VDWREKGAVTPVKDQGACGSCWAFSAVGNIESQWAVADHRLXXLSEQQ 177


>gi|224065647|ref|XP_002301901.1| predicted protein [Populus trichocarpa]
 gi|222843627|gb|EEE81174.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/303 (36%), Positives = 159/303 (52%), Gaps = 46/303 (15%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV----FGVNKFFDLS 246
           +L E  +  H K+Y S+E+   R E F  N+     +  +++   V     G+N+F DLS
Sbjct: 31  DLFESWISKHGKIYESIEEKWLRFEIFKDNL-----FHIDETNKKVVNYWLGLNEFSDLS 85

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
             + + +  GL +D + E  + S              + F +  +     +P++ DWR +
Sbjct: 86  HEEFKNKYLGLKVDMS-ERRECS--------------QEFNYKDVM---SIPKSVDWRKK 127

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG-GCNGGRMD 364
           G ++ VK QG C  CWAFS V  VE ++ I   +LT LS Q+LVDCD +N  GCNGG MD
Sbjct: 128 GAVTDVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTTNNYGCNGGLMD 187

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
            A  YII NGG+  +  YPY   E    C + +EE   V +  Y  +P   EE + K +A
Sbjct: 188 YAFSYIISNGGLHKEVDYPYIMEEGT--CEMRKEESEVVTISGYHDVPQNSEESLLKALA 245

Query: 425 TRGPLSVGMNANG--LFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDW 470
            + PLSV + A+G    +YSGGV D      L+  +    YG++  + Y IVKNSWGS W
Sbjct: 246 NQ-PLSVAIEASGRDFQFYSGGVFDGHCGTQLDHGVAAVGYGSTNGLDYIIVKNSWGSKW 304

Query: 471 GEK 473
           GEK
Sbjct: 305 GEK 307



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 91/163 (55%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++LVDCD +N  GCNGG MD A  YII NGG+  +  YPY   E    C
Sbjct: 157 IVTGNLTSLSEQELVDCDTTNNYGCNGGLMDYAFSYIISNGGLHKEVDYPYIMEEGT--C 214

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +EE   V +  Y  +P   EE + K +A + PLSV + A+G    +YSGGV D +  
Sbjct: 215 EMRKEESEVVTISGYHDVPQNSEESLLKALANQ-PLSVAIEASGRDFQFYSGGVFDGH-- 271

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG     D     Y IVKNSWGS WGEK
Sbjct: 272 -CGTQL-DHGVAAVGYGSTNGLD-----YIIVKNSWGSKWGEK 307



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 20/158 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +  F +++  H K+Y S+E+   R E F  N+   ++  ++     +  +N+F DLS  +
Sbjct: 30  IDLFESWISKHGKIYESIEEKWLRFEIFKDNLFHIDETNKKVVNYWL-GLNEFSDLSHEE 88

Query: 102 LQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            + +  GL +D + E  + S              + F +  +     +P++ DWR +G +
Sbjct: 89  FKNKYLGLKVDMS-ERRECS--------------QEFNYKDVM---SIPKSVDWRKKGAV 130

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           + VK QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 131 TDVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 168


>gi|67773382|gb|AAY81948.1| cysteine protease 11 [Paragonimus westermani]
          Length = 322

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 149/298 (50%), Gaps = 42/298 (14%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E   + + KVY++ ED  +R   F  N+ +A+  Q  D GTA +GV +F DL+  +  
Sbjct: 26  LYEQFKRDYGKVYAN-EDDQKRFAIFKDNLVRAQKLQLRDQGTARYGVTQFSDLTPEEFA 84

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
                            L  P +S+Q +      Q   L+     PE  DWRA+G ++ V
Sbjct: 85  A--------------KYLSPPLNSDQVER----VQPTGLKAA---PERMDWRAKGAVTPV 123

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII 371
           + QG+C  CWAFS  G VE    I+   L  LS QQLVDCDM+  GCNGG    +   I+
Sbjct: 124 ENQGECGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDMAAEGCNGGWPSSSYLEIM 183

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           D GG+ S+  YPY     E+ C + +E+    K+ +   +   E E +  ++A  GPLS 
Sbjct: 184 DMGGLESENDYPYVG--VEQTCALNKEK-LVAKIDDAVVLGASENEHV-DYLAEHGPLST 239

Query: 432 GMNANGLFYYSGGVI----------DLNQRLYGT------SIPYWIVKNSWGSDWGEK 473
            +NA  L +Y  G++          DLN  +          +PYWI+KNSWG+DWGEK
Sbjct: 240 LLNAVALQHYQSGILHPSHKDCPDDDLNHAVLTVGYDREGDMPYWIIKNSWGTDWGEK 297



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 89/156 (57%), Gaps = 9/156 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCDM+  GCNGG    +   I+D GG+ S+  YPY     E+ C + +E
Sbjct: 151 QLVSLSKQQLVDCDMAAEGCNGGWPSSSYLEIMDMGGLESENDYPYVG--VEQTCALNKE 208

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           +    K+ +   +   E E +  ++A  GPLS  +NA  L +Y  G++  + + C     
Sbjct: 209 K-LVAKIDDAVVLGASENEHV-DYLAEHGPLSTLLNAVALQHYQSGILHPSHKDCPDDDL 266

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           NHA++ VGY  E       +PYWI+KNSWG+DWGEK
Sbjct: 267 NHAVLTVGYDRE-----GDMPYWIIKNSWGTDWGEK 297



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 22/155 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           +  F RD+ KVY++ ED  +R   F  N+ +A+  Q  D GTA + V +F DL+  +   
Sbjct: 27  YEQFKRDYGKVYAN-EDDQKRFAIFKDNLVRAQKLQLRDQGTARYGVTQFSDLTPEEFAA 85

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                           L  P +S+Q +      Q   L+     PE  DWRA+G ++ V+
Sbjct: 86  --------------KYLSPPLNSDQVER----VQPTGLKAA---PERMDWRAKGAVTPVE 124

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG+C  CWAFS  G VE    I+   L  LS Q 
Sbjct: 125 NQGECGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQ 159


>gi|394331735|gb|AFN27090.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWRKKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   +   C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 16/163 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q
Sbjct: 134 KKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQ 176


>gi|309752918|gb|ADO85436.1| cathepsin [Pieris rapae granulovirus]
          Length = 339

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 168/311 (54%), Gaps = 33/311 (10%)

Query: 190 NNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD 249
           +N+ E  ++ ++K Y++ ++   ++ENF  N++   D ++  S  AVF +N F DL+++D
Sbjct: 33  DNIFEDFIKKYNKSYATDQERAIKYENFKNNLKMIND-KNNGSKDAVFDINAFSDLNKND 91

Query: 250 L-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 308
           L ++ TG  +       + S   P  S + + ++   +   +     LPE+FDWR +  +
Sbjct: 92  LLRRTTGFRMGLK----KNSYYTPDVSKECNVQVIKSEPQII-----LPESFDWRDKHGV 142

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQ 368
           + VK Q +C  CWAFSA+  +E+++ I+ N   +LS Q L++CD  N GC GG M  AL+
Sbjct: 143 TPVKNQLECGSCWAFSAIANIESLYNIKHNKELDLSEQHLINCDSINNGCGGGLMHWALE 202

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
            I+  GG+VS++  PY   ++     V + + F V +   +R     E ++++ +   GP
Sbjct: 203 TILQQGGIVSEKDEPYYGLDA-----VCKPKQFNVSISGCTRYVLKNENKLRELLIANGP 257

Query: 429 LSVGMNANGLFYYSGGVIDLNQRLYG-------------TSIPYWIVKNSWGSDWGEK-- 473
           +S+ ++   +  Y  G+ D+ + + G              +IPYWI+KNSWG +WGEK  
Sbjct: 258 ISMAVDIIDVIDYKEGITDICENMNGLNHAVLLVGYGVHNNIPYWIMKNSWGEEWGEKGY 317

Query: 474 --VEDKVGSSG 482
             V+  + S G
Sbjct: 318 LRVQRNINSCG 328



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 86/152 (56%), Gaps = 13/152 (8%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ + L++CD  N GC GG M  AL+ I+  GG+VS++  PY   ++     V + + F 
Sbjct: 177 LSEQHLINCDSINNGCGGGLMHWALETILQQGGIVSEKDEPYYGLDA-----VCKPKQFN 231

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           V +   +R     E ++++ +   GP+S+ ++   +  Y  G+ D+ +   N    NHA+
Sbjct: 232 VSISGCTRYVLKNENKLRELLIANGPISMAVDIIDVIDYKEGITDICE---NMNGLNHAV 288

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           ++VGYG        +IPYWI+KNSWG +WGEK
Sbjct: 289 LLVGYGVH-----NNIPYWIMKNSWGEEWGEK 315



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 88/156 (56%), Gaps = 11/156 (7%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL-Q 103
           F +F++ ++K Y++ ++   ++ENF  N++   D +   S  AVF++N F DL+ +DL +
Sbjct: 36  FEDFIKKYNKSYATDQERAIKYENFKNNLKMIND-KNNGSKDAVFDINAFSDLNKNDLLR 94

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           + TG  +       + S   P  S + + ++   +   +     LPE+FDWR +  ++ V
Sbjct: 95  RTTGFRMGLK----KNSYYTPDVSKECNVQVIKSEPQII-----LPESFDWRDKHGVTPV 145

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K Q +C  CWAFSA+  +E+++ I+ N   +LS QH
Sbjct: 146 KNQLECGSCWAFSAIANIESLYNIKHNKELDLSEQH 181


>gi|228861649|ref|YP_002854669.1| cathepsin [Euproctis pseudoconspersa nucleopolyhedrovirus]
 gi|226425097|gb|ACO53509.1| cathepsin [Euproctis pseudoconspersa nucleopolyhedrovirus]
          Length = 334

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 166/333 (49%), Gaps = 52/333 (15%)

Query: 174 AFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG 233
           A S +   +    ++  +  EL V +++K Y+   +  +R+  F  N+E+  + +++ + 
Sbjct: 18  ACSCIFQSDTYDPLKAADYFELFVANYNKNYTDPLEKTKRYHIFKDNLEEINN-KNKSND 76

Query: 234 TAVFGVNKFFDLSESDL-QQLTGLNLDSTLEDI-------QPSLQAPFSSNQTDTEMRAF 285
           TAV+ +NKF DLS ++L  + TGLN+     +        QP  + P +           
Sbjct: 77  TAVYRINKFSDLSTNELISKYTGLNVPGETANFCKIVVLDQPPGKGPLN----------- 125

Query: 286 QFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSV 345
                         FDWR +  ++ +K QG C  CWAF+ +  +E+ +AI+ N   +LS 
Sbjct: 126 --------------FDWRQQNKVTPIKNQGACGACWAFATLASIESQYAIRNNVHLDLSE 171

Query: 346 QQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKV 405
           QQ++DCD  + GC GG +  A + +I  GGV  ++ YPY+   +   C +  +E F VKV
Sbjct: 172 QQMIDCDYVDMGCYGGLLHTAFEQMIQMGGVEEERQYPYEGVNN--NCRLKSDERFVVKV 229

Query: 406 KEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT 455
           K   R     EE++K  +   GPL + ++A+ +F Y  GVI+      LN  +    YG 
Sbjct: 230 KGCYRYLVMREEKLKDLLRAVGPLPMAIDASSIFNYYRGVINYCGNNGLNHAVLLVGYGV 289

Query: 456 S--IPYWIVKNSWGSDWGE----KVEDKVGSSG 482
              +P+W  KN+WG DWGE    +V   V + G
Sbjct: 290 ENGVPFWTFKNTWGDDWGEDGYFRVRQNVDACG 322



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 85/151 (56%), Gaps = 11/151 (7%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ ++++DCD  + GC GG +  A + +I  GGV  ++ YPY+   +   C +  +E F 
Sbjct: 169 LSEQQMIDCDYVDMGCYGGLLHTAFEQMIQMGGVEEERQYPYEGVNN--NCRLKSDERFV 226

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           VKVK   R     EE++K  +   GPL + ++A+ +F Y  GVI+     C     NHA+
Sbjct: 227 VKVKGCYRYLVMREEKLKDLLRAVGPLPMAIDASSIFNYYRGVIN----YCGNNGLNHAV 282

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           ++VGYG E       +P+W  KN+WG DWGE
Sbjct: 283 LLVGYGVE-----NGVPFWTFKNTWGDDWGE 308



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 40/192 (20%)

Query: 20  FMIKVALLE-SNIFQTRGYLNSPVTR---FLNFMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           F+++  LL  S IFQ+  Y   P+     F  F+ +++K Y+   +  +R+  F  N+E+
Sbjct: 10  FLLQTFLLACSCIFQSDTY--DPLKAADYFELFVANYNKNYTDPLEKTKRYHIFKDNLEE 67

Query: 76  AEDYQREDSGTAVFEVNKFFDLSDSDL-QQLTGLNLDSTLEDI-------QPSLQAPFSS 127
             + + + + TAV+ +NKF DLS ++L  + TGLN+     +        QP  + P + 
Sbjct: 68  INN-KNKSNDTAVYRINKFSDLSTNELISKYTGLNVPGETANFCKIVVLDQPPGKGPLN- 125

Query: 128 NQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAI 187
                                   FDWR +  ++ +K QG C  CWAF+ +  +E+ +AI
Sbjct: 126 ------------------------FDWRQQNKVTPIKNQGACGACWAFATLASIESQYAI 161

Query: 188 QGNNLTELSVQH 199
           + N   +LS Q 
Sbjct: 162 RNNVHLDLSEQQ 173


>gi|400180417|gb|AFP73347.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 149/294 (50%), Gaps = 33/294 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++     P     F  N                 DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSYLSPSPLSSTEFKINDLSD-------------DDMPSNLDWRESGAVTQVK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +II+
Sbjct: 147 HQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIE 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 207 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIG 261

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 262 IAASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 315



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +II+NGG+  +  Y Y     ++   
Sbjct: 169 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIIENGGISRESDYEYLG---QQYTC 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 226 RSQEKTAAVQISSYKVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 281 ADRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 315



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 17/170 (10%)

Query: 33  QTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF 89
           QTRG     ++   R   +M  H +VY    +   R   F  N++  E   +  + +   
Sbjct: 24  QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKL 83

Query: 90  EVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL 148
            +N+F D++  + L + TGLN+ ++     P     F  N                 DD+
Sbjct: 84  GMNEFADITSQEFLAKFTGLNIPNSYLSPSPLSSTEFKINDLSD-------------DDM 130

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P   DWR  G +++VK QG+C CCWAFSAVG +E  + I   NL E S Q
Sbjct: 131 PSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQ 180


>gi|113195461|ref|YP_717598.1| V-CATH [Clanis bilineata nucleopolyhedrosis virus]
 gi|66968272|gb|AAY59557.1| V-CATH [Clanis bilineata nucleopolyhedrosis virus]
          Length = 325

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 163/317 (51%), Gaps = 42/317 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAE-DYQSEDSGTAVFGVNKFFDLSESDL-QQLT 254
           V +++K+Y+  ++   R++ F  N+E+     Q ED   AVF +NKF D+S+S++  + T
Sbjct: 31  VANYNKMYNDTQEKAYRYKIFKHNLEEINIKNQVEDH--AVFSINKFSDMSKSEIISKYT 88

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
           GL+L S +++                  RA   +     +  P  FDWR    ++ V+ Q
Sbjct: 89  GLSLPSLMQE---------------NFCRAIILDG--PPNKAPINFDWRQYNAVTPVRVQ 131

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID-N 373
           G C  CWAFS +  +E+ ++I+ N    LSVQQLVDCD SN GC GG +  AL+ II+  
Sbjct: 132 GNCGSCWAFSTLAGIESQYSIKYNKQISLSVQQLVDCDTSNMGCAGGLLHTALEQIINAG 191

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GGV+ ++ YPYK  + +          F V+V    R     EE++K  +   GP+ V +
Sbjct: 192 GGVLQEEDYPYKGVDKQCNL---PHNNFAVQVLGCYRYIVMNEEKLKDVLRAVGPIPVAI 248

Query: 434 NANGLFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGE----KVEDK 477
           +A  +  YS G+I       LN  +    YG    +PYW +KN+WG DWGE    +V   
Sbjct: 249 DAASIVDYSRGIIRTCTYYGLNHAVLLVGYGVQDGVPYWTLKNTWGDDWGEHGYFRVRQN 308

Query: 478 VGSSGNRTRDLELTGVL 494
           V S G    DL  T V+
Sbjct: 309 VNSCG-IINDLASTAVI 324



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 88/157 (56%), Gaps = 13/157 (8%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIID-NGGVVSDQAYPYKASESERGCLVG 554
           +K   L+ ++LVDCD SN GC GG +  AL+ II+  GGV+ ++ YPYK  + +      
Sbjct: 155 NKQISLSVQQLVDCDTSNMGCAGGLLHTALEQIINAGGGVLQEEDYPYKGVDKQCNL--- 211

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
               F V+V    R     EE++K  +   GP+ V ++A  +  YS G+I    R C   
Sbjct: 212 PHNNFAVQVLGCYRYIVMNEEKLKDVLRAVGPIPVAIDAASIVDYSRGII----RTCTYY 267

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             NHA+++VGYG ++      +PYW +KN+WG DWGE
Sbjct: 268 GLNHAVLLVGYGVQD-----GVPYWTLKNTWGDDWGE 299



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 27/187 (14%)

Query: 17  LHTFMIKVALLESNIFQTRGY--LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVE 74
           + TF++  A++ S++    GY  L +P   F +F+ +++K+Y+  ++   R++ F  N+E
Sbjct: 1   MKTFLLFFAIITSSVC---GYDLLKAP-DYFESFVANYNKMYNDTQEKAYRYKIFKHNLE 56

Query: 75  KAE-DYQREDSGTAVFEVNKFFDLSDSDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDT 132
           +     Q ED   AVF +NKF D+S S++  + TGL+L S +++                
Sbjct: 57  EINIKNQVEDH--AVFSINKFSDMSKSEIISKYTGLSLPSLMQE---------------N 99

Query: 133 EMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNL 192
             RA   +     +  P  FDWR    ++ V+ QG C  CWAFS +  +E+ ++I+ N  
Sbjct: 100 FCRAIILDG--PPNKAPINFDWRQYNAVTPVRVQGNCGSCWAFSTLAGIESQYSIKYNKQ 157

Query: 193 TELSVQH 199
             LSVQ 
Sbjct: 158 ISLSVQQ 164


>gi|157864849|ref|XP_001681133.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124427|emb|CAJ02283.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGKDWGEK 317



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   +   C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGKDWGEK 317



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 16/163 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQ 176


>gi|242072398|ref|XP_002446135.1| hypothetical protein SORBIDRAFT_06g002170 [Sorghum bicolor]
 gi|241937318|gb|EES10463.1| hypothetical protein SORBIDRAFT_06g002170 [Sorghum bicolor]
          Length = 338

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 154/308 (50%), Gaps = 47/308 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + +VY    +  RR E F  NV   E + +  +     G+N+F DL+  + +   G    
Sbjct: 43  YGRVYKDAAEKARRFEVFKDNVAFVESFNTNKNNKFWLGINQFADLTIEEFKANKGFK-- 100

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                       P S+ +  T    F++ +L     LP A DWR +G ++ +K QG+C C
Sbjct: 101 ------------PISAEKVPT--TGFKYENLSV-SALPTAVDWRTKGAVTPIKNQGQCGC 145

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVV 377
           CWAFSAV  +E +  +   +L  LS Q+LVDCD    + GC GG MD A +++I NGG+ 
Sbjct: 146 CWAFSAVAAMEGIVKLSTGNLISLSEQELVDCDTHSMDEGCEGGWMDSAFEFVIKNGGLA 205

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN- 436
           +  +YPYKA + +  C  G +      +K +  +P  +E  + K VA + P+SV ++A+ 
Sbjct: 206 TVSSYPYKAVDGK--CKGGSKSA--ATIKGHEDVPVNDEAALMKAVANQ-PVSVAVDASD 260

Query: 437 -GLFYYSGGVI------DLNQRL----YGT---SIPYWIVKNSWGSDWGEK--------V 474
                YSGGV+      +L+  +    YG       YWI+KNSWG+ WGEK        +
Sbjct: 261 RTFMLYSGGVMTGSCGTELDHGIAAIGYGVESDGTKYWILKNSWGTTWGEKGFLRMEKDI 320

Query: 475 EDKVGSSG 482
            DK G  G
Sbjct: 321 SDKQGMCG 328



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 17/162 (10%)

Query: 498 LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ ++LVDCD    + GC GG MD A +++I NGG+ +  +YPYKA + +  C  G 
Sbjct: 166 LISLSEQELVDCDTHSMDEGCEGGWMDSAFEFVIKNGGLATVSSYPYKAVDGK--CKGGS 223

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNP 613
           +      +K +  +P  +E  + K VA + P+SV ++A+      YSGGV+  +   C  
Sbjct: 224 KSA--ATIKGHEDVPVNDEAALMKAVANQ-PVSVAVDASDRTFMLYSGGVMTGS---CGT 277

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           +  +H +  +GYG E   DGT   YWI+KNSWG+ WGEK  L
Sbjct: 278 EL-DHGIAAIGYGVES--DGTK--YWILKNSWGTTWGEKGFL 314



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 18/179 (10%)

Query: 21  MIKVALLESNIFQTRGYLNSP-VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           ++  A L S++   R   ++  V R  N+M ++ +VY    +  RR E F  NV   E +
Sbjct: 11  ILGCASLCSSVLAARELSDAAMVERHENWMVEYGRVYKDAAEKARRFEVFKDNVAFVESF 70

Query: 80  QREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF 139
               +      +N+F DL+  + +   G                P S+ +  T    F++
Sbjct: 71  NTNKNNKFWLGINQFADLTIEEFKANKGFK--------------PISAEKVPT--TGFKY 114

Query: 140 NSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +L     LP A DWR +G ++ +K QG+C CCWAFSAV  +E +  +   NL  LS Q
Sbjct: 115 ENLSV-SALPTAVDWRTKGAVTPIKNQGQCGCCWAFSAVAAMEGIVKLSTGNLISLSEQ 172


>gi|357160300|ref|XP_003578721.1| PREDICTED: oryzain beta chain-like [Brachypodium distachyon]
          Length = 349

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 159/309 (51%), Gaps = 37/309 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV-FGVNKFFDLSESDLQQLTG 255
           +  H +VY    +  RR E F  NV   E + +  +      GVN+F DL+  + +    
Sbjct: 41  MAQHGRVYKDGAEKARRFEAFRNNVVFIESFNAAGNRRKFWLGVNQFTDLTNDEFRAT-- 98

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
               +    I+ +  A   ++ T T    F+++++   D LP A DWRA+G ++ +K QG
Sbjct: 99  ---KTNKGFIKRNAAAVNKASPTGT----FRYSNV-SADALPAAVDWRAKGAVTPIKNQG 150

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG---GCNGGRMDDALQYIID 372
           +C CCWAFSAV   E +  +    L  LS Q+LVDCD +NG   GC GG MDDA ++II 
Sbjct: 151 QCGCCWAFSAVAATEGIVQLSTGKLVPLSEQELVDCD-ANGADHGCEGGEMDDAFEFIIK 209

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S+  YPY A + +  C           +K Y  +P  +E  + K VA + P+SV 
Sbjct: 210 NGGLTSETNYPYTAQDGQ--CKAKNTINSVATIKGYEDVPANDEASLMKAVAAQ-PVSVA 266

Query: 433 MNANGLFY--YSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE----K 473
           ++   + +  Y+GGV+       L+  +    YG +     +W++KNSWG+ WGE    +
Sbjct: 267 VDGGDMVFQHYAGGVLSGSCGTSLDHGIVAVGYGAADDGTKFWLMKNSWGTTWGEDGYIR 326

Query: 474 VEDKVGSSG 482
           +E  V  +G
Sbjct: 327 MEKDVADAG 335



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 17/160 (10%)

Query: 497 KLSRLATEKLVDCDMSNG---GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ ++LVDCD +NG   GC GG MDDA ++II NGG+ S+  YPY A + +  C  
Sbjct: 174 KLVPLSEQELVDCD-ANGADHGCEGGEMDDAFEFIIKNGGLTSETNYPYTAQDGQ--CKA 230

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLC 611
                    +K Y  +P  +E  + K VA + P+SV ++   + +  Y+GGV+  +   C
Sbjct: 231 KNTINSVATIKGYEDVPANDEASLMKAVAAQ-PVSVAVDGGDMVFQHYAGGVLSGS---C 286

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              + +H ++ VGYG  +  DGT   +W++KNSWG+ WGE
Sbjct: 287 G-TSLDHGIVAVGYGAAD--DGTK--FWLMKNSWGTTWGE 321



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)

Query: 16  YLHTFMIKVALLESNIFQTRGYLNSP-VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVE 74
           +L   ++    L S +   R   ++  V R   +M  H +VY    +  RR E F  NV 
Sbjct: 7   FLLAVVLGCICLCSTVLSARELGDAAMVERHEQWMAQHGRVYKDGAEKARRFEAFRNNVV 66

Query: 75  KAEDYQREDSGTAV-FEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTE 133
             E +    +       VN+F DL++ + +        +    I+ +  A   ++ T T 
Sbjct: 67  FIESFNAAGNRRKFWLGVNQFTDLTNDEFRAT-----KTNKGFIKRNAAAVNKASPTGT- 120

Query: 134 MRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLT 193
              F+++++   D LP A DWRA+G ++ +K QG+C CCWAFSAV   E +  +    L 
Sbjct: 121 ---FRYSNV-SADALPAAVDWRAKGAVTPIKNQGQCGCCWAFSAVAATEGIVQLSTGKLV 176

Query: 194 ELSVQ 198
            LS Q
Sbjct: 177 PLSEQ 181


>gi|288804650|ref|YP_003429335.1| cathepsin [Pieris rapae granulovirus]
 gi|270161225|gb|ACZ63497.1| cathepsin [Pieris rapae granulovirus]
          Length = 339

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 168/311 (54%), Gaps = 33/311 (10%)

Query: 190 NNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD 249
           +N+ E  ++ ++K Y++ ++   ++ENF  N++   D ++  S  AVF +N F DL+++D
Sbjct: 33  DNIFEDFIKKYNKSYATDQERAIKYENFKNNLKMIND-KNNGSKYAVFDINAFSDLNKND 91

Query: 250 L-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 308
           L ++ TG  +       + S   P  S + + ++   +   +     LPE+FDWR +  +
Sbjct: 92  LLRRTTGFRMGLK----KNSYYTPDVSKECNVQVIKSEPQII-----LPESFDWRDKHGV 142

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQ 368
           + VK Q +C  CWAFSA+  +E+++ I+ N   +LS Q L++CD  N GC GG M  AL+
Sbjct: 143 TPVKNQLECGSCWAFSAIANIESLYNIKHNKELDLSEQHLINCDSINNGCGGGLMHWALE 202

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
            I+  GG+VS++  PY   ++     V + + F V +   +R     E ++++ +   GP
Sbjct: 203 TILQQGGIVSEKDEPYYGLDA-----VCKPKQFNVSISGCTRYVLKNENKLRELLIANGP 257

Query: 429 LSVGMNANGLFYYSGGVIDLNQRLYG-------------TSIPYWIVKNSWGSDWGEK-- 473
           +S+ ++   +  Y  G+ D+ + + G              +IPYWI+KNSWG +WGEK  
Sbjct: 258 ISMAVDIIDVIDYKEGITDICENMNGLNHAVLLVGYGVHNNIPYWIMKNSWGEEWGEKGY 317

Query: 474 --VEDKVGSSG 482
             V+  + S G
Sbjct: 318 LRVQRNINSCG 328



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 86/152 (56%), Gaps = 13/152 (8%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ + L++CD  N GC GG M  AL+ I+  GG+VS++  PY   ++     V + + F 
Sbjct: 177 LSEQHLINCDSINNGCGGGLMHWALETILQQGGIVSEKDEPYYGLDA-----VCKPKQFN 231

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           V +   +R     E ++++ +   GP+S+ ++   +  Y  G+ D+ +   N    NHA+
Sbjct: 232 VSISGCTRYVLKNENKLRELLIANGPISMAVDIIDVIDYKEGITDICE---NMNGLNHAV 288

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           ++VGYG        +IPYWI+KNSWG +WGEK
Sbjct: 289 LLVGYGVH-----NNIPYWIMKNSWGEEWGEK 315



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 88/156 (56%), Gaps = 11/156 (7%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL-Q 103
           F +F++ ++K Y++ ++   ++ENF  N++   D +   S  AVF++N F DL+ +DL +
Sbjct: 36  FEDFIKKYNKSYATDQERAIKYENFKNNLKMIND-KNNGSKYAVFDINAFSDLNKNDLLR 94

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           + TG  +       + S   P  S + + ++   +   +     LPE+FDWR +  ++ V
Sbjct: 95  RTTGFRMGLK----KNSYYTPDVSKECNVQVIKSEPQII-----LPESFDWRDKHGVTPV 145

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K Q +C  CWAFSA+  +E+++ I+ N   +LS QH
Sbjct: 146 KNQLECGSCWAFSAIANIESLYNIKHNKELDLSEQH 181


>gi|414588007|tpg|DAA38578.1| TPA: hypothetical protein ZEAMMB73_159244 [Zea mays]
          Length = 307

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 149/294 (50%), Gaps = 39/294 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  +D+VY    +  RR E F  N    E + ++       GVN+F DL+  + +   G 
Sbjct: 9   MAEYDRVYKDAAEKARRFEVFKDNFAFVESFNADKKNKFWLGVNQFADLTTEEFKANKGF 68

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                          P S+ +  T    F++ +L     LP A DWR +G ++ +K QG+
Sbjct: 69  K--------------PISAEEVPT--TGFKYENLSV-SALPTAVDWRTKGAVTPIKNQGQ 111

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSN--GGCNGGRMDDALQYIIDNG 374
           C CCWAFSA+  +E +  +   +L  LS Q+ VDCD  N   GC GG MD+A +++I NG
Sbjct: 112 CGCCWAFSAIAAMEGIVKLSTGNLVSLSEQEPVDCDTHNMDEGCEGGWMDNAFEFVIKNG 171

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++ +YPYK  + +  C  G +      +K +  +P   E  + K VA++ P+SV ++
Sbjct: 172 GLATESSYPYKVVDGK--CKGGSKSA--ATIKGHEDVPPNNEAALMKVVASQ-PVSVAVD 226

Query: 435 AN--GLFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
           A+      YSGGV+       L+  +    YG       YWI+KNSWG+ WGEK
Sbjct: 227 ASDRTFMLYSGGVMTGSCGTQLDHGIAAIGYGVESDDTKYWILKNSWGTTWGEK 280



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 92/162 (56%), Gaps = 17/162 (10%)

Query: 498 LSRLATEKLVDCDMSN--GGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ ++ VDCD  N   GC GG MD+A +++I NGG+ ++ +YPYK  + +  C  G 
Sbjct: 135 LVSLSEQEPVDCDTHNMDEGCEGGWMDNAFEFVIKNGGLATESSYPYKVVDGK--CKGGS 192

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNP 613
           +      +K +  +P   E  + K VA++ P+SV ++A+      YSGGV+  +   C  
Sbjct: 193 KSA--ATIKGHEDVPPNNEAALMKVVASQ-PVSVAVDASDRTFMLYSGGVMTGS---CGT 246

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           +  +H +  +GYG E   D T   YWI+KNSWG+ WGEK  L
Sbjct: 247 QL-DHGIAAIGYGVES--DDTK--YWILKNSWGTTWGEKGFL 283



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M ++D+VY    +  RR E F  N    E +  +        VN+F DL+  + +
Sbjct: 4   RHERWMAEYDRVYKDAAEKARRFEVFKDNFAFVESFNADKKNKFWLGVNQFADLTTEEFK 63

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
              G                P S+ +  T    F++ +L     LP A DWR +G ++ +
Sbjct: 64  ANKGFK--------------PISAEEVPT--TGFKYENLSV-SALPTAVDWRTKGAVTPI 106

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG+C CCWAFSA+  +E +  +   NL  LS Q
Sbjct: 107 KNQGQCGCCWAFSAIAAMEGIVKLSTGNLVSLSEQ 141


>gi|394331743|gb|AFN27094.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   +   C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 16/163 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQ 176


>gi|378943046|gb|AFC76264.1| cathepsin L-like protease [Leishmania major]
 gi|378943056|gb|AFC76269.1| cathepsin L-like protease [Leishmania major]
 gi|394331745|gb|AFN27095.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   +   C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q 
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQ 177


>gi|115477767|ref|NP_001062479.1| Os08g0556900 [Oryza sativa Japonica Group]
 gi|42407937|dbj|BAD09076.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113624448|dbj|BAF24393.1| Os08g0556900 [Oryza sativa Japonica Group]
 gi|125562525|gb|EAZ07973.1| hypothetical protein OsI_30231 [Oryza sativa Indica Group]
 gi|215701458|dbj|BAG92882.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 385

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/196 (44%), Positives = 117/196 (59%), Gaps = 20/196 (10%)

Query: 295 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS 354
           DLP A DWR +G +  VK+QG+C  CWAFS +  VE ++AI+ ++LT LS QQLVDCD  
Sbjct: 135 DLPAAVDWREKGAVGAVKDQGQCGSCWAFSTIAAVEGINAIRTSNLTALSEQQLVDCDTK 194

Query: 355 --NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GC+GG MD+A QYI  +GGV +  AYPY+A +S             V +  Y  +P
Sbjct: 195 TGNAGCDGGLMDNAFQYIAKHGGVAASSAYPYRARQSSC--KSSAASSPAVTIDGYEDVP 252

Query: 413 YGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTSI--- 457
              E  +KK VA + P+SV + A G    +YS GV       +L+  +    YGT++   
Sbjct: 253 ANSESALKKAVANQ-PVSVAIEAGGSHFQFYSEGVFAGKCGTELDHGVAAVGYGTTVDGT 311

Query: 458 PYWIVKNSWGSDWGEK 473
            YWIV+NSWG+DWGEK
Sbjct: 312 KYWIVRNSWGADWGEK 327



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 91/167 (54%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  +  S L+ L+ ++LVDCD    N GC+GG MD+A QYI  +GGV +  AYPY+A +S
Sbjct: 172 INAIRTSNLTALSEQQLVDCDTKTGNAGCDGGLMDNAFQYIAKHGGVAASSAYPYRARQS 231

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
                        V +  Y  +P   E  +KK VA + P+SV + A G    +YS GV  
Sbjct: 232 SC--KSSAASSPAVTIDGYEDVPANSESALKKAVANQ-PVSVAIEAGGSHFQFYSEGVFA 288

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H +  VGYG     DGT   YWIV+NSWG+DWGEK
Sbjct: 289 GK---CGTEL-DHGVAAVGYG--TTVDGTK--YWIVRNSWGADWGEK 327



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R   +V   + +  RR   F  NV    ++ R D    +  +N+F D++  + ++     
Sbjct: 52  RGQHRVARDLGEKARRFNVFKDNVRLIHEFNRRDEPYKL-RLNRFGDMTADEFRR----- 105

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRA-FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 168
                   + S    F       E R+ F +   R   DLP A DWR +G +  VK+QG+
Sbjct: 106 ---AYASSRVSHHRMFRGR---GERRSGFMYAGAR---DLPAAVDWREKGAVGAVKDQGQ 156

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           C  CWAFS +  VE ++AI+ +NLT LS Q 
Sbjct: 157 CGSCWAFSTIAAVEGINAIRTSNLTALSEQQ 187


>gi|414870137|tpg|DAA48694.1| TPA: vignain [Zea mays]
          Length = 484

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 148/281 (52%), Gaps = 31/281 (11%)

Query: 209 DLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPS 268
           D  RR   F  NV    ++   D    +  +N+F D++  + ++    +  +     +  
Sbjct: 171 DKARRFNVFKANVRLIHEFNRRDEPYKLR-LNRFGDMTADEFRRHYAGSRVAHHRMFRGD 229

Query: 269 LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGV 328
            Q   +S  +      F +   R   D+P + DWR +G ++ VK+QG+C  CWAFS +  
Sbjct: 230 RQGSSASASS------FMYADAR---DVPASVDWRQKGAVTDVKDQGQCGSCWAFSTIAA 280

Query: 329 VEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKAS 387
           VE ++AI+  +LT LS QQLVDCD  +N GCNGG MD A QYI  +GGV ++ AYPY+A 
Sbjct: 281 VEGINAIKTKNLTSLSEQQLVDCDTKANAGCNGGLMDYAFQYIAKHGGVAAEDAYPYRAR 340

Query: 388 ESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV 445
           ++       +     V +  Y  +P  +E  +KK VA + P+SV + A+G    +YS GV
Sbjct: 341 QAS----CKKSPAPVVTIDGYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGV 395

Query: 446 I------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
                  +L+  +    YG +     YW+VKNSWG +WGEK
Sbjct: 396 FSGRCGTELDHGVAAVGYGVTADGTKYWLVKNSWGPEWGEK 436



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +    L+ L+ ++LVDCD  +N GCNGG MD A QYI  +GGV ++ AYPY+A ++ 
Sbjct: 284 INAIKTKNLTSLSEQQLVDCDTKANAGCNGGLMDYAFQYIAKHGGVAAEDAYPYRARQAS 343

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
                 +     V +  Y  +P  +E  +KK VA + P+SV + A+G    +YS GV   
Sbjct: 344 ----CKKSPAPVVTIDGYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGVFSG 398

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  +  +H +  VGYG     DGT   YW+VKNSWG +WGEK
Sbjct: 399 R---CGTEL-DHGVAAVGYG--VTADGTK--YWLVKNSWGPEWGEK 436



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 10/138 (7%)

Query: 61  DLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPS 120
           D  RR   F  NV    ++ R D    +  +N+F D++  + ++    +  +     +  
Sbjct: 171 DKARRFNVFKANVRLIHEFNRRDEPYKL-RLNRFGDMTADEFRRHYAGSRVAHHRMFRGD 229

Query: 121 LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGV 180
            Q   +S  +      F +   R   D+P + DWR +G ++ VK+QG+C  CWAFS +  
Sbjct: 230 RQGSSASASS------FMYADAR---DVPASVDWRQKGAVTDVKDQGQCGSCWAFSTIAA 280

Query: 181 VEAMHAIQGNNLTELSVQ 198
           VE ++AI+  NLT LS Q
Sbjct: 281 VEGINAIKTKNLTSLSEQ 298


>gi|157864851|ref|XP_001681134.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124428|emb|CAJ02284.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|378943050|gb|AFC76266.1| cathepsin L-like protease [Leishmania major]
 gi|378943052|gb|AFC76267.1| cathepsin L-like protease [Leishmania major]
 gi|378943054|gb|AFC76268.1| cathepsin L-like protease [Leishmania major]
 gi|378943058|gb|AFC76270.1| cathepsin L-like protease [Leishmania major]
 gi|394331737|gb|AFN27091.1| cysteine protease [Leishmania major]
 gi|394331741|gb|AFN27093.1| cysteine protease [Leishmania major]
 gi|394331747|gb|AFN27096.1| cysteine protease [Leishmania major]
 gi|394331749|gb|AFN27097.1| cysteine protease [Leishmania major]
 gi|394331751|gb|AFN27098.1| cysteine protease [Leishmania major]
 gi|394331753|gb|AFN27099.1| cysteine protease [Leishmania major]
 gi|394331755|gb|AFN27100.1| cysteine protease [Leishmania major]
 gi|394331757|gb|AFN27101.1| cysteine protease [Leishmania major]
 gi|394331759|gb|AFN27102.1| cysteine protease [Leishmania major]
 gi|394331761|gb|AFN27103.1| cysteine protease [Leishmania major]
 gi|394331763|gb|AFN27104.1| cysteine protease [Leishmania major]
 gi|394331765|gb|AFN27105.1| cysteine protease [Leishmania major]
 gi|394331767|gb|AFN27106.1| cysteine protease [Leishmania major]
 gi|394331769|gb|AFN27107.1| cysteine protease [Leishmania major]
 gi|394331771|gb|AFN27108.1| cysteine protease [Leishmania major]
 gi|394331773|gb|AFN27109.1| cysteine protease [Leishmania major]
 gi|394331775|gb|AFN27110.1| cysteine protease [Leishmania major]
 gi|394331777|gb|AFN27111.1| cysteine protease [Leishmania major]
 gi|394331779|gb|AFN27112.1| cysteine protease [Leishmania major]
 gi|394331781|gb|AFN27113.1| cysteine protease [Leishmania major]
 gi|394331783|gb|AFN27114.1| cysteine protease [Leishmania major]
 gi|394331785|gb|AFN27115.1| cysteine protease [Leishmania major]
 gi|394331787|gb|AFN27116.1| cysteine protease [Leishmania major]
 gi|394331789|gb|AFN27117.1| cysteine protease [Leishmania major]
 gi|394331791|gb|AFN27118.1| cysteine protease [Leishmania major]
 gi|394331793|gb|AFN27119.1| cysteine protease [Leishmania major]
 gi|394331795|gb|AFN27120.1| cysteine protease [Leishmania major]
 gi|394331797|gb|AFN27121.1| cysteine protease [Leishmania major]
 gi|394331799|gb|AFN27122.1| cysteine protease [Leishmania major]
 gi|394331801|gb|AFN27123.1| cysteine protease [Leishmania major]
 gi|394331803|gb|AFN27124.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   +   C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 16/163 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQ 176


>gi|255563134|ref|XP_002522571.1| cysteine protease, putative [Ricinus communis]
 gi|223538262|gb|EEF39871.1| cysteine protease, putative [Ricinus communis]
          Length = 343

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 150/294 (51%), Gaps = 41/294 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQLTG 255
           +  H + Y    +  RR + F  N++  E++    + T   G+NKF DLSE + +    G
Sbjct: 44  MARHGRTYHDNAEKERRFQIFKNNLDYIENFNKAFNKTYKLGLNKFSDLSEEEFVTTYNG 103

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
             + +TL     +++  F             F++  + D++PE+ DWR  GV++ VK QG
Sbjct: 104 YEMPTTLPTANTTVKPTF-------------FSNYYNQDEVPESIDWRENGVVTSVKNQG 150

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGG 375
           +C CCWAFSAV  VE    I GN  + LS QQL+DC   N GC GG M  A +YI+ N G
Sbjct: 151 ECGCCWAFSAVAAVE---GIAGNGAS-LSAQQLLDCVGDNSGCGGGTMIKAFEYIVQNQG 206

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           +VSD  YPY+  +++  C  G       ++  Y  +    EE +K+ VA + P+SV ++A
Sbjct: 207 IVSDTDYPYE--QTQEMCRSGSN--VAARITGYESV-IQSEEALKRAVA-KQPISVAIDA 260

Query: 436 NG---LFYYSGGVI---DLNQRL--------YGTS---IPYWIVKNSWGSDWGE 472
           +       Y  GV    D    L        YGT+     YW+VKNSWG +WGE
Sbjct: 261 SSGPNFKSYISGVFSAEDCGTHLTHAVTLVGYGTTEDGTKYWLVKNSWGEEWGE 314



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 85/159 (53%), Gaps = 22/159 (13%)

Query: 499 SRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEG 558
           + L+ ++L+DC   N GC GG M  A +YI+ N G+VSD  YPY+  +++  C  G    
Sbjct: 172 ASLSAQQLLDCVGDNSGCGGGTMIKAFEYIVQNQGIVSDTDYPYE--QTQEMCRSGSN-- 227

Query: 559 FKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG---LFYYSGGVI---DLNQRLCN 612
              ++  Y  +    EE +K+ VA + P+SV ++A+       Y  GV    D    L  
Sbjct: 228 VAARITGYESV-IQSEEALKRAVA-KQPISVAIDASSGPNFKSYISGVFSAEDCGTHL-- 283

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                HA+ +VGYG  E  DGT   YW+VKNSWG +WGE
Sbjct: 284 ----THAVTLVGYGTTE--DGTK--YWLVKNSWGEEWGE 314



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 18/153 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLT 106
           +M  H + Y    +  RR + F  N++  E++ +  + T    +NKF DLS+ + +    
Sbjct: 43  WMARHGRTYHDNAEKERRFQIFKNNLDYIENFNKAFNKTYKLGLNKFSDLSEEEFVTTYN 102

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           G  + +TL     +++  F             F++  + D++PE+ DWR  GV++ VK Q
Sbjct: 103 GYEMPTTLPTANTTVKPTF-------------FSNYYNQDEVPESIDWRENGVVTSVKNQ 149

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           G+C CCWAFSAV  VE    I GN  + LS Q 
Sbjct: 150 GECGCCWAFSAVAAVE---GIAGNGAS-LSAQQ 178


>gi|318136892|gb|ADV41672.1| cysteine protease [Nicotiana tabacum]
          Length = 349

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 147/293 (50%), Gaps = 34/293 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           + HHDKVY  + +   R + F  NVE+ E + + +      GVNKF DL+    + L   
Sbjct: 46  IAHHDKVYKDLNEKEMRFKIFKENVERIEAFNAGEDKGYKLGVNKFSDLTNEKFRVL--- 102

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              +  +   P +    SS++  T  R           D+P   DWR +G ++ +K+Q +
Sbjct: 103 --HTGYKRSHPKV---MSSSKPKTHFRYANVT------DIPPTMDWRKKGAVTPIKDQKE 151

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV   E +H ++   L  LS Q+LVDCD+   + GC+GG +D A  +I+ N 
Sbjct: 152 CGCCWAFSAVAATEGLHQLKTGKLIPLSEQELVDCDVEGEDEGCSGGLLDTAFDFILKNK 211

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPYK  +    C   +      K+  Y  +P   E+ + + VA + P+SV ++
Sbjct: 212 GLTTEANYPYKGEDGV--CNKKKSALSAAKIAGYEDVPANSEKALLQAVANQ-PVSVAID 268

Query: 435 ANG--LFYYSGGVID------LNQRL----YGTS---IPYWIVKNSWGSDWGE 472
            +     +YS GV        LN  +    YG +     YWI+KNSWGS WG+
Sbjct: 269 GSSFDFQFYSSGVFSGSCSTWLNHAVTAVGYGATTDGTKYWIIKNSWGSKWGD 321



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 15/159 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC+GG +D A  +I+ N G+ ++  YPYK  +    C   
Sbjct: 174 KLIPLSEQELVDCDVEGEDEGCSGGLLDTAFDFILKNKGLTTEANYPYKGEDGV--CNKK 231

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +      K+  Y  +P   E+ + + VA + P+SV ++ +     +YS GV   +   C+
Sbjct: 232 KSALSAAKIAGYEDVPANSEKALLQAVANQ-PVSVAIDGSSFDFQFYSSGVFSGS---CS 287

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               NHA+  VGYG     DGT   YWI+KNSWGS WG+
Sbjct: 288 -TWLNHAVTAVGYGATT--DGTK--YWIIKNSWGSKWGD 321



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 16/184 (8%)

Query: 17  LHTFMIKVALLESNIFQTR--GYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVE 74
           L  F I + +  S +  +R   Y  S   R   ++  HDKVY  + +   R + F  NVE
Sbjct: 12  LALFFIFLGVWRSQVASSRPINYEASMRARHDQWIAHHDKVYKDLNEKEMRFKIFKENVE 71

Query: 75  KAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM 134
           + E +   +       VNKF DL++   + L      +  +   P +    SS++  T  
Sbjct: 72  RIEAFNAGEDKGYKLGVNKFSDLTNEKFRVL-----HTGYKRSHPKV---MSSSKPKTHF 123

Query: 135 RAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTE 194
           R           D+P   DWR +G ++ +K+Q +C CCWAFSAV   E +H ++   L  
Sbjct: 124 RYANVT------DIPPTMDWRKKGAVTPIKDQKECGCCWAFSAVAATEGLHQLKTGKLIP 177

Query: 195 LSVQ 198
           LS Q
Sbjct: 178 LSEQ 181


>gi|157864855|ref|XP_001681136.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124430|emb|CAJ02286.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMTAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   +   C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMTAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 16/163 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQ 176


>gi|391340505|ref|XP_003744580.1| PREDICTED: digestive cysteine proteinase 1-like [Metaseiulus
           occidentalis]
          Length = 469

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 168/340 (49%), Gaps = 41/340 (12%)

Query: 178 VGVVEAMHAIQGNNLT--ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTA 235
           +  V A+    G +LT  E   +H  K Y   E  LR+   F  N+   E + +E + + 
Sbjct: 149 IASVLALVVAVGADLTNFEHFKEHFGKTYEGDEHALRQG-IFQRNLAHIEKFNAEKAASR 207

Query: 236 --VFGVNKFFDLSESDLQQ-LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH 292
               G+ +F D+S ++ +Q   GL ++++                T  ++R  Q   +  
Sbjct: 208 GYTLGITQFADMSTAEFRQTYLGLRMNAS----------------TIAKLRKLQREVVAD 251

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
             DLPEA DWR +G +S VK+QG+C  CWAFS  G +E  H ++   L  LS QQ+VDC 
Sbjct: 252 DRDLPEAVDWRDKGAVSPVKDQGQCGSCWAFSTSGAIEGQHFLKNGELLSLSEQQMVDCS 311

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG+   A++Y+  NGG+  + AYPYK      G    +++    K+  +    
Sbjct: 312 WLDFGCNGGQPMLAMEYVRFNGGLELETAYPYKGV---GGSCHSDKKSAAAKITGFWMAG 368

Query: 413 YGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV--------IDLNQRL----YGTSI- 457
           +  E  ++K VA  GP+SVGM+A+G    +Y  G+        I L+  +    YGTS  
Sbjct: 369 FYSESALQKAVAKVGPISVGMDASGEDFQHYKSGIYNPESCSSIGLDHAVLAVGYGTSDD 428

Query: 458 -PYWIVKNSWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS 496
             YW+VKNSW + WGEK   K+  +      +  T + P+
Sbjct: 429 GDYWLVKNSWNTSWGEKGYFKLPRNKGNKCGIATTPIYPT 468



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ +++VDC   + GCNGG+   A++Y+  NGG+  + AYPYK      G    ++
Sbjct: 298 ELLSLSEQQMVDCSWLDFGCNGGQPMLAMEYVRFNGGLELETAYPYKGV---GGSCHSDK 354

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCNPK 614
           +    K+  +    +  E  ++K VA  GP+SVGM+A+G    +Y  G+   N   C+  
Sbjct: 355 KSAAAKITGFWMAGFYSESALQKAVAKVGPISVGMDASGEDFQHYKSGI--YNPESCSSI 412

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +HA++ VGYG  +  D     YW+VKNSW + WGEK
Sbjct: 413 GLDHAVLAVGYGTSDDGD-----YWLVKNSWNTSWGEK 445



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 20/184 (10%)

Query: 19  TFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAED 78
              I++ L  +++      + + +T F +F     K Y   E  LR+   F  N+   E 
Sbjct: 140 VLTIEMRLYIASVLALVVAVGADLTNFEHFKEHFGKTYEGDEHALRQG-IFQRNLAHIEK 198

Query: 79  YQREDSGTAVFE--VNKFFDLSDSDLQQ-LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMR 135
           +  E + +  +   + +F D+S ++ +Q   GL ++++                T  ++R
Sbjct: 199 FNAEKAASRGYTLGITQFADMSTAEFRQTYLGLRMNAS----------------TIAKLR 242

Query: 136 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTEL 195
             Q   +    DLPEA DWR +G +S VK+QG+C  CWAFS  G +E  H ++   L  L
Sbjct: 243 KLQREVVADDRDLPEAVDWRDKGAVSPVKDQGQCGSCWAFSTSGAIEGQHFLKNGELLSL 302

Query: 196 SVQH 199
           S Q 
Sbjct: 303 SEQQ 306


>gi|1848231|gb|AAB48120.1| cathepsin L-like protease [Leishmania major]
          Length = 443

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 13/164 (7%)

Query: 492 GVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESER 549
            V   KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   + 
Sbjct: 164 AVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDV 223

Query: 550 G-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
             C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+    
Sbjct: 224 PECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS-- 280

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 281 --CIGEQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q 
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQ 177


>gi|157864843|ref|XP_001681130.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124424|emb|CAJ02280.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY ++      C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYTSTFGYVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGKDWGEK 317



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY ++      C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYTSTFGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGKDWGEK 317



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 16/163 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQ 176


>gi|157864845|ref|XP_001681131.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124425|emb|CAJ02281.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVS 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMTAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   +   C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVSTEKSYPYVSGNGDVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMTAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 16/163 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQ 176


>gi|427777627|gb|JAA54265.1| Putative cathepsin f-like cysteine protease [Rhipicephalus
           pulchellus]
          Length = 475

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 164/337 (48%), Gaps = 50/337 (14%)

Query: 188 QGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSE 247
           Q  +L  +  + ++K Y   E+   R   F  N+++   +   + GTA +G+ +F DLS 
Sbjct: 161 QERSLFSVFARTYNKTYKDKEEHEARFMIFKNNLKRIALFNRLEEGTAHYGLTEFSDLSP 220

Query: 248 SDLQQ-LTGL--NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 304
           S+ ++   GL  +L     +++P    P +                   + LP+ FDWR 
Sbjct: 221 SEFERHYLGLKKDLAEHKAEVKPIKVGPVN-------------------EPLPDLFDWRT 261

Query: 305 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMD 364
           +G +++VK QG C  CWAFS  G VE    +  + L  LS Q+LVDCD  + GC GG M 
Sbjct: 262 KGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLSRSKLLSLSEQELVDCDHGDHGCKGGYMG 321

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
            A++ +I+ GG+ ++  YPYK  +    C   + E  K +V+ +  +P   E E+  W+ 
Sbjct: 322 QAMKAVIEMGGLETESEYPYKGVDGT--CEFNKTES-KARVQSFVGLP-QNETELAYWLM 377

Query: 425 TRGPLSVGMNANGLFYYSGGV------------IDLNQRLYG----------TSIPYWIV 462
             GP+S+G+NAN + +Y GG+            +D    L G            +PYWIV
Sbjct: 378 KHGPVSIGINANAMQFYFGGISHPWKFLCSPTDLDHGVLLVGFGVDKRSFRRKPVPYWIV 437

Query: 463 KNSWGSDWGEKVEDKV--GSSGNRTRDLELTGVLPSK 497
           KNSWG  WGEK   +V  G        + L+ V+P K
Sbjct: 438 KNSWGKYWGEKGYYRVYRGDGTCGVNQMALSAVVPPK 474



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 92/150 (61%), Gaps = 5/150 (3%)

Query: 504 EKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKV 563
           ++LVDCD  + GC GG M  A++ +I+ GG+ ++  YPYK  +    C   + E  K +V
Sbjct: 303 QELVDCDHGDHGCKGGYMGQAMKAVIEMGGLETESEYPYKGVDGT--CEFNKTES-KARV 359

Query: 564 KEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIV 623
           + +  +P   E E+  W+   GP+S+G+NAN + +Y GG+    + LC+P   +H +++V
Sbjct: 360 QSFVGLP-QNETELAYWLMKHGPVSIGINANAMQFYFGGISHPWKFLCSPTDLDHGVLLV 418

Query: 624 GYGEEEKK-DGTSIPYWIVKNSWGSDWGEK 652
           G+G +++      +PYWIVKNSWG  WGEK
Sbjct: 419 GFGVDKRSFRRKPVPYWIVKNSWGKYWGEK 448



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 22/141 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R ++K Y   E+   R   F  N+++   + R + GTA + + +F DLS S+ ++
Sbjct: 166 FSVFARTYNKTYKDKEEHEARFMIFKNNLKRIALFNRLEEGTAHYGLTEFSDLSPSEFER 225

Query: 105 -LTGL--NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
              GL  +L     +++P    P +                   + LP+ FDWR +G ++
Sbjct: 226 HYLGLKKDLAEHKAEVKPIKVGPVN-------------------EPLPDLFDWRTKGAVT 266

Query: 162 KVKEQGKCACCWAFSAVGVVE 182
           +VK QG C  CWAFS  G VE
Sbjct: 267 EVKNQGMCGSCWAFSVTGNVE 287


>gi|18141285|gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 485

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 157/304 (51%), Gaps = 41/304 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K  +S+ +  RR E F  N+   +++  ++  +   G+ KF DL+  + + +      
Sbjct: 55  HGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNL-SYRLGLTKFADLTNDEYRSMY----- 108

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                    L +      T + +R      +R GD +PE+ DWR EG +++VK+QG C  
Sbjct: 109 ---------LGSRLKRKATKSSLRY----EVRVGDAIPESVDWRKEGAVAEVKDQGSCGS 155

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS +G VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+NGG+ +
Sbjct: 156 CWAFSTIGAVEGINKIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDT 215

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           ++ YPYK  +    C    +    V +  Y  +P   EE +KK ++ + P+SV +   G 
Sbjct: 216 EEDYPYKGVDGR--CDQTRKNAKVVTIDLYEDVPANSEESLKKALSHQ-PISVAIEGGGR 272

Query: 439 FY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE----KVEDKVGS 480
            +  Y  G+       DL+  +    YGT     YWIVKNSWG+ WGE    ++E  + S
Sbjct: 273 AFQLYDSGIFDGICGTDLDHGVVAVGYGTENGKDYWIVKNSWGTSWGESGYIRMERNIAS 332

Query: 481 SGNR 484
           S  +
Sbjct: 333 SAGK 336



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +++ YPYK  +  
Sbjct: 168 INKIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYKGVDGR 227

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P   EE +KK ++ + P+SV +   G  +  Y  G+ D 
Sbjct: 228 --CDQTRKNAKVVTIDLYEDVPANSEESLKKALSHQ-PISVAIEGGGRAFQLYDSGIFD- 283

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              +C     +H ++ VGYG E  KD     YWIVKNSWG+ WGE
Sbjct: 284 --GICGTDL-DHGVVAVGYGTENGKD-----YWIVKNSWGTSWGE 320



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 19/151 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K  +S+ +  RR E F  N+   +++  ++  +    + KF DL++ + + +  
Sbjct: 51  WLVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNL-SYRLGLTKFADLTNDEYRSMY- 108

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                        L +      T + +R      +R GD +PE+ DWR EG +++VK+QG
Sbjct: 109 -------------LGSRLKRKATKSSLRY----EVRVGDAIPESVDWRKEGAVAEVKDQG 151

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS +G VE ++ I   +L  LS Q
Sbjct: 152 SCGSCWAFSTIGAVEGINKIVTGDLITLSEQ 182


>gi|324514421|gb|ADY45863.1| Viral cathepsin [Ascaris suum]
          Length = 399

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 149/300 (49%), Gaps = 53/300 (17%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG- 255
           +Q +D+ YSS ++   R  NFV N++  +  Q +     VFG+ +F D SE++++ +T  
Sbjct: 103 MQEYDRQYSSNDETRLRFRNFVRNMKFIKKAQ-KGRDNVVFGITRFTDWSEAEMKSMTCE 161

Query: 256 ------LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
                 +  + TL+D Q      F                     D P+AFDWR + V++
Sbjct: 162 DWAANEVGSEITLDDDQDESDEVF---------------------DRPDAFDWRTKSVVT 200

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQY 369
            +K+Q +C  CWAF+A+GVVE+M+AI  N L  LS Q+L+DCD  + GC+GG    A +Y
Sbjct: 201 DIKDQERCGSCWAFAAIGVVESMNAIAKNPLISLSEQELIDCDTDDNGCSGGYRPYAFRY 260

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
            +   G+VS++ YPYK  E  + C       +   VK   R     E+ M  +V  RGP+
Sbjct: 261 -VRRHGIVSEKDYPYKGKEQSQ-CAANGTRVYIKSVKYIGR----NEDAMADFVFYRGPI 314

Query: 430 SVGMNANG-LFYYSGGVI-----DLNQRLYGTSI------------PYWIVKNSWGSDWG 471
           SVG+N     F+Y  GV      D  +   G+               YW++KNSWG  WG
Sbjct: 315 SVGINVTKEFFHYRSGVFTPKKEDCEEDSQGSHAVAVVGYGSQNGEDYWLIKNSWGKKWG 374



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 13/163 (7%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  +  + L  L+ ++L+DCD  + GC+GG    A +Y +   G+VS++ YPYK  E  +
Sbjct: 223 MNAIAKNPLISLSEQELIDCDTDDNGCSGGYRPYAFRY-VRRHGIVSEKDYPYKGKEQSQ 281

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG-LFYYSGGVIDLNQ 608
            C       +   VK   R     E+ M  +V  RGP+SVG+N     F+Y  GV    +
Sbjct: 282 -CAANGTRVYIKSVKYIGR----NEDAMADFVFYRGPISVGINVTKEFFHYRSGVFTPKK 336

Query: 609 RLCNPKAQ-NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
             C   +Q +HA+ +VGYG +  +D     YW++KNSWG  WG
Sbjct: 337 EDCEEDSQGSHAVAVVGYGSQNGED-----YWLIKNSWGKKWG 374



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 29/164 (17%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +  F+ FM+++D+ YSS ++   R  NFV N++  +  Q+      VF + +F D S+++
Sbjct: 96  IDSFVKFMQEYDRQYSSNDETRLRFRNFVRNMKFIKKAQK-GRDNVVFGITRFTDWSEAE 154

Query: 102 LQQLTG-------LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 154
           ++ +T        +  + TL+D Q      F                     D P+AFDW
Sbjct: 155 MKSMTCEDWAANEVGSEITLDDDQDESDEVF---------------------DRPDAFDW 193

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           R + V++ +K+Q +C  CWAF+A+GVVE+M+AI  N L  LS Q
Sbjct: 194 RTKSVVTDIKDQERCGSCWAFAAIGVVESMNAIAKNPLISLSEQ 237


>gi|2414683|emb|CAB16316.1| cysteine proteinase precursor [Vicia sativa]
          Length = 379

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 153/310 (49%), Gaps = 53/310 (17%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           +L ++ + K YS+ E+ L R   F  N+ KA ++Q+ D  TA+ GV +F DLSE + ++ 
Sbjct: 56  KLFMKDYSKKYSTTEEYLLRLGIFAKNMVKAAEHQALDP-TAIHGVTQFSDLSEEEFERF 114

Query: 254 -TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TG        +    +  P        +++ F           PE FDWR +G ++ +K
Sbjct: 115 YTGFKGGFPSSNAAGGVAPPL-------DVKGF-----------PENFDWREKGAVTGIK 156

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--------MSNGGCNGGRMD 364
            QGKC  CWAF+  G +E  + +    L  LS QQLVDCD          + GCNGG M 
Sbjct: 157 TQGKCGSCWAFTTTGSIEGANFLATGKLVSLSEQQLVDCDNKCDITKTSCDNGCNGGLMT 216

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
            A  Y+++ GG+  + +YPY  ++ E  C   +     V+V  ++ IP  +E ++  ++ 
Sbjct: 217 TAYDYLMEAGGLEEETSYPYTGAQGE--CKF-DPNKVAVRVSNFTNIP-ADENQIAAYLV 272

Query: 425 TRGPLSVGMNANGLFYYSGGV----IDLNQRLY-----------GTSI------PYWIVK 463
             GPL++ +NA  +  Y GGV    I   +RL            G SI      PYW +K
Sbjct: 273 NHGPLAIAVNAVFMQTYVGGVSCPLICSKRRLNHGVLLVGYNAEGFSILRLRKKPYWTIK 332

Query: 464 NSWGSDWGEK 473
           NSWG  WGEK
Sbjct: 333 NSWGEQWGEK 342



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 27/203 (13%)

Query: 467 GSDWGEKVEDKVGSSGNRTRDLELTG---VLPSKLSRLATEKLVDCD--------MSNGG 515
           G+  G K + K GS    T    + G   +   KL  L+ ++LVDCD          + G
Sbjct: 150 GAVTGIKTQGKCGSCWAFTTTGSIEGANFLATGKLVSLSEQQLVDCDNKCDITKTSCDNG 209

Query: 516 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 575
           CNGG M  A  Y+++ GG+  + +YPY  ++ E  C   +     V+V  ++ IP  +E 
Sbjct: 210 CNGGLMTTAYDYLMEAGGLEEETSYPYTGAQGE--CKF-DPNKVAVRVSNFTNIP-ADEN 265

Query: 576 EMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTS 635
           ++  ++   GPL++ +NA  +  Y GGV      +C+ +  NH +++VGY  E    G S
Sbjct: 266 QIAAYLVNHGPLAIAVNAVFMQTYVGGVS--CPLICSKRRLNHGVLLVGYNAE----GFS 319

Query: 636 I------PYWIVKNSWGSDWGEK 652
           I      PYW +KNSWG  WGEK
Sbjct: 320 ILRLRKKPYWTIKNSWGEQWGEK 342



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 20/157 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  FM+D+ K YS+ E+ L R   F  N+ KA ++Q  D  TA+  V +F DLS+ + +
Sbjct: 54  KFKLFMKDYSKKYSTTEEYLLRLGIFAKNMVKAAEHQALDP-TAIHGVTQFSDLSEEEFE 112

Query: 104 QL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +  TG        +    +  P        +++ F           PE FDWR +G ++ 
Sbjct: 113 RFYTGFKGGFPSSNAAGGVAPPL-------DVKGF-----------PENFDWREKGAVTG 154

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +K QGKC  CWAF+  G +E  + +    L  LS Q 
Sbjct: 155 IKTQGKCGSCWAFTTTGSIEGANFLATGKLVSLSEQQ 191


>gi|242086591|ref|XP_002439128.1| hypothetical protein SORBIDRAFT_09g000960 [Sorghum bicolor]
 gi|241944413|gb|EES17558.1| hypothetical protein SORBIDRAFT_09g000960 [Sorghum bicolor]
          Length = 371

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/317 (35%), Positives = 166/317 (52%), Gaps = 38/317 (11%)

Query: 175 FSAVGVV--EAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS 232
           FS VG    + +H  +   L E  V  + K Y+S E+ L R E F  N+   ++   + +
Sbjct: 46  FSIVGYSPEDLVHHDRLIKLFEEWVAKYRKAYASFEEKLHRFEVFKDNLHHIDEANKKVT 105

Query: 233 GTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH 292
            T   G+N F DL+  + +                 L+ P +   TD+    F++  +  
Sbjct: 106 -TYWLGLNAFADLTHDEFKA------------TYLGLRQPETKKTTDSR---FRYGGVAD 149

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
            DD+P + DWR +G ++ VK QG+C  CWAFS V  VE ++ I   +LT LS Q+LVDC 
Sbjct: 150 -DDVPASVDWRKKGAVTDVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCS 208

Query: 353 M-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK-VKVKEYSR 410
              N GCNGG MD+A  YI  +GG+ +++AYPY   E +  C     +G + V +  Y  
Sbjct: 209 TDGNNGCNGGVMDNAFSYIASSGGLRTEEAYPYLMEEGD--CDDKARDGEQVVTISGYED 266

Query: 411 IPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTSI- 457
           +P  +E+ + K +A + PLSV + A+G    +YSGGV       +L+  +    YG+S  
Sbjct: 267 VPANDEQALVKALAHQ-PLSVAIEASGRHFQFYSGGVFNGPCGSELDHGVAAVGYGSSKG 325

Query: 458 -PYWIVKNSWGSDWGEK 473
             Y IVKNSWGS WGEK
Sbjct: 326 QDYIIVKNSWGSHWGEK 342



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 94/164 (57%), Gaps = 16/164 (9%)

Query: 493 VLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++LVDC    N GCNGG MD+A  YI  +GG+ +++AYPY   E +  C
Sbjct: 191 IVTGNLTSLSEQELVDCSTDGNNGCNGGVMDNAFSYIASSGGLRTEEAYPYLMEEGD--C 248

Query: 552 LVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
                +G + V +  Y  +P  +E+ + K +A + PLSV + A+G    +YSGGV +   
Sbjct: 249 DDKARDGEQVVTISGYEDVPANDEQALVKALAHQ-PLSVAIEASGRHFQFYSGGVFN--- 304

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  +H +  VGYG  + +D     Y IVKNSWGS WGEK
Sbjct: 305 GPCGSEL-DHGVAAVGYGSSKGQD-----YIIVKNSWGSHWGEK 342



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 17/157 (10%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +  F  ++  + K Y+S E+ L R E F  N+   ++  ++ + T    +N F DL+  +
Sbjct: 63  IKLFEEWVAKYRKAYASFEEKLHRFEVFKDNLHHIDEANKKVT-TYWLGLNAFADLTHDE 121

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +                 L+ P +   TD+    F++  +   DD+P + DWR +G ++
Sbjct: 122 FKA------------TYLGLRQPETKKTTDSR---FRYGGVAD-DDVPASVDWRKKGAVT 165

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK QG+C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 166 DVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 202


>gi|171702831|dbj|BAG16371.1| cysteine protease [Brassica oleracea var. italica]
          Length = 441

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 157/304 (51%), Gaps = 41/304 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K  +S+ +  RR E F  N+   +++  ++  +   G+ KF DL+  + + +      
Sbjct: 49  HGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNL-SYRLGLTKFADLTNDEYRSMY----- 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                    L +      T + +R      +R GD +PE+ DWR EG +++VK+QG C  
Sbjct: 103 ---------LGSRLKRKATKSSLRY----EVRVGDAIPESVDWRKEGAVAEVKDQGSCGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS +G VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+NGG+ +
Sbjct: 150 CWAFSTIGAVEGINKIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDT 209

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           ++ YPYK  +    C    +    V +  Y  +P   EE +KK ++ + P+SV +   G 
Sbjct: 210 EEDYPYKGVDGR--CDQTRKNAKVVTIDLYEDVPANSEESLKKALSHQ-PISVAIEGGGR 266

Query: 439 FY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE----KVEDKVGS 480
            +  Y  G+       DL+  +    YGT     YWIVKNSWG+ WGE    ++E  + S
Sbjct: 267 AFQLYDSGIFDGICGTDLDHGVVAVGYGTENGKDYWIVKNSWGTSWGESGYIRMERNIAS 326

Query: 481 SGNR 484
           S  +
Sbjct: 327 SAGK 330



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +++ YPYK  +  
Sbjct: 162 INKIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYKGVDGR 221

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P   EE +KK ++ + P+SV +   G  +  Y  G+ D 
Sbjct: 222 --CDQTRKNAKVVTIDLYEDVPANSEESLKKALSHQ-PISVAIEGGGRAFQLYDSGIFD- 277

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              +C     +H ++ VGYG E  KD     YWIVKNSWG+ WGE
Sbjct: 278 --GICGTDL-DHGVVAVGYGTENGKD-----YWIVKNSWGTSWGE 314



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 19/151 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K  +S+ +  RR E F  N+   +++  ++  +    + KF DL++ + + +  
Sbjct: 45  WLVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNL-SYRLGLTKFADLTNDEYRSMY- 102

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                        L +      T + +R      +R GD +PE+ DWR EG +++VK+QG
Sbjct: 103 -------------LGSRLKRKATKSSLRY----EVRVGDAIPESVDWRKEGAVAEVKDQG 145

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS +G VE ++ I   +L  LS Q
Sbjct: 146 SCGSCWAFSTIGAVEGINKIVTGDLITLSEQ 176


>gi|50355611|dbj|BAD29954.1| cysteine protease [Daucus carota]
          Length = 474

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 164/320 (51%), Gaps = 36/320 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V+HH K Y+++ +   R   F  NV   + + S  + +   G+NKF DL+  + + L   
Sbjct: 65  VKHH-KNYNALGEKETRFGIFKDNVGFVDRHNSMRNQSYKLGLNKFADLTNDEYRSLY-- 121

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L   +   +   +  F S++       F F     GD LPE+ DWR  G ++ VK+QG+
Sbjct: 122 -LSGKMMKRERKNEDGFRSDR-------FVFED---GDHLPESVDWRDRGAVAPVKDQGQ 170

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS VG VE ++ I    L  LS Q+LVDCD   N GCNGG MD A ++I+ NGG
Sbjct: 171 CGSCWAFSTVGAVEGINKIVTGELISLSEQELVDCDNGYNQGCNGGLMDYAFEFIVKNGG 230

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPYK  +    C    +    V +  Y  +P+ +E+ +KK VA + P+SV + A
Sbjct: 231 IDTEDDYPYKGVDGL--CDQNRKNAKVVTINGYEDVPHNDEKSLKKAVAHQ-PVSVAIEA 287

Query: 436 NGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE----KVEDK 477
            G  +  Y  GV       +L+  +    YG+     YWIV+NSWG DWGE    ++E  
Sbjct: 288 GGRAFQLYESGVFTGQCGTELDHGVVAVGYGSENGKDYWIVRNSWGPDWGESGYIRLERN 347

Query: 478 VGSSGNRTRDLELTGVLPSK 497
           V S+      + +    P+K
Sbjct: 348 VASTSTGKCGIAMQASYPTK 367



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  +L  L+ ++LVDCD   N GCNGG MD A ++I+ NGG+ ++  YPYK  +  
Sbjct: 186 INKIVTGELISLSEQELVDCDNGYNQGCNGGLMDYAFEFIVKNGGIDTEDDYPYKGVDGL 245

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P+ +E+ +KK VA + P+SV + A G  +  Y  GV   
Sbjct: 246 --CDQNRKNAKVVTINGYEDVPHNDEKSLKKAVAHQ-PVSVAIEAGGRAFQLYESGVF-- 300

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C  +  +H ++ VGYG E  KD     YWIV+NSWG DWGE
Sbjct: 301 -TGQCGTEL-DHGVVAVGYGSENGKD-----YWIVRNSWGPDWGE 338



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 25/193 (12%)

Query: 17  LHTFMIKVALLESNIF---QTRGYLNSPVTRFLNFMRDHDKVYSSVED-LLRRHENFVTN 72
           L +F++  +  + +I    +T G LNSP       +R HD++ S  E  L++ H+N+   
Sbjct: 22  LASFLMLSSASDMSIITYDETHG-LNSPP------LRTHDQLLSLYESWLVKHHKNYNAL 74

Query: 73  VEKAEDYQREDSGTAVFEVN-KFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTD 131
            EK   +        +F+ N  F D  +S   Q   L L+   +      ++ + S +  
Sbjct: 75  GEKETRF-------GIFKDNVGFVDRHNSMRNQSYKLGLNKFADLTNDEYRSLYLSGKMM 127

Query: 132 TEMRAFQ--FNSLRH----GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMH 185
              R  +  F S R     GD LPE+ DWR  G ++ VK+QG+C  CWAFS VG VE ++
Sbjct: 128 KRERKNEDGFRSDRFVFEDGDHLPESVDWRDRGAVAPVKDQGQCGSCWAFSTVGAVEGIN 187

Query: 186 AIQGNNLTELSVQ 198
            I    L  LS Q
Sbjct: 188 KIVTGELISLSEQ 200


>gi|9630927|ref|NP_047524.1| Cystein Protease [Bombyx mori NPV]
 gi|1168798|sp|P41721.1|CATV_NPVBM RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|540066|gb|AAB49542.1| cysteine protease [Bombyx mori NPV]
 gi|3745946|gb|AAC63793.1| Cystein Protease [Bombyx mori NPV]
          Length = 323

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 166/338 (49%), Gaps = 47/338 (13%)

Query: 177 AVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           AV    A   ++  N  E  V   +K YSS  + LRR + F  N+ +  +    DS  A 
Sbjct: 12  AVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRH 292
           + +NKF DLS+ + + + TGL+L +  ++    +   Q P                    
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG----------------- 112

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
               P  FDWR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS QQ++DCD
Sbjct: 113 ----PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD 168

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A + II  GGV  +  YPY+A  +   C +   + F V+VK+  R  
Sbjct: 169 FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNSNK-FLVQVKDCYRYI 225

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYW 460
              EE++K  +   GP+ + ++A  +  Y  G+I       LN  +    YG   +IPYW
Sbjct: 226 IVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGIIKYCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +V+  + + G R  +L  T V+
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRN-ELASTAVI 322



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A + II  GGV  +  YPY+A  +   C +  
Sbjct: 154 NELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNS 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  G+I    + C    
Sbjct: 212 NK-FLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGII----KYCFDSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      +IPYW  KN+WG+DWGE
Sbjct: 267 LNHAVLLVGYGVE-----NNIPYWTFKNTWGTDWGE 297



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 28/166 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P   F  F+   +K YSS  + LRR + F  N+ +  +  + DS  A +E+NKF DL
Sbjct: 22  LKAP-NYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AKYEINKFSDL 78

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 153
           S D  + + TGL+L +  ++    +   Q P                        P  FD
Sbjct: 79  SKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG---------------------PLEFD 117

Query: 154 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           WR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS Q 
Sbjct: 118 WRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQ 163


>gi|356563584|ref|XP_003550041.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 366

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 151/294 (51%), Gaps = 43/294 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H KVY+ + +  +R + F  N+   +++ +  + T   G+NKF D++  + + +      
Sbjct: 47  HQKVYNGLGEKDKRFQVFKDNLGFIQEHNNNQNNTYKLGLNKFADMTNEEYRVM------ 100

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH------GDDLPEAFDWRAEGVISKVKE 313
                        +   ++D + R  +  S  H      GD LP   DWR +G ++ +K+
Sbjct: 101 -------------YFGTKSDAKRRLMKTKSTGHRYAYSAGDQLPVHVDWRVKGAVAPIKD 147

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIID 372
           QG C  CWAFS V  VEA++ I       LS Q+LVDCD + N GCNGG MD A ++II 
Sbjct: 148 QGSCGSCWAFSTVATVEAINKIVTGKFVSLSEQELVDCDRAYNQGCNGGLMDYAFEFIIQ 207

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ +D+ YPY+  +    C   ++    V +  Y  +P  +E  +KK VA R P+S+ 
Sbjct: 208 NGGIDTDKDYPYRGFDGI--CDPTKKNAKAVNIDGYEDVPPYDENALKKAVA-RQPVSIA 264

Query: 433 MNANG--LFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           + A+G  L  Y  GV        L+  +    YG+   + YW+V+NSWG+ WGE
Sbjct: 265 IEASGRALQLYQSGVFTGECGTSLDHGVVVVGYGSENGVDYWLVRNSWGTGWGE 318



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  K   L+ ++LVDCD + N GCNGG MD A ++II NGG+ +D+ YPY+  +  
Sbjct: 166 INKIVTGKFVSLSEQELVDCDRAYNQGCNGGLMDYAFEFIIQNGGIDTDKDYPYRGFDGI 225

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C   ++    V +  Y  +P  +E  +KK VA R P+S+ + A+G  L  Y  GV   
Sbjct: 226 --CDPTKKNAKAVNIDGYEDVPPYDENALKKAVA-RQPVSIAIEASGRALQLYQSGVFTG 282

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   + +H +++VGYG E   D     YW+V+NSWG+ WGE
Sbjct: 283 E---CGT-SLDHGVVVVGYGSENGVD-----YWLVRNSWGTGWGE 318



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 27/186 (14%)

Query: 19  TFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAED 78
           +F +  A+  S I  T    N  +T +  ++  H KVY+ + +  +R + F  N+   ++
Sbjct: 16  SFTLSCAIDTSTI--TNYTDNEVMTMYEEWLVKHQKVYNGLGEKDKRFQVFKDNLGFIQE 73

Query: 79  YQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
           +    + T    +NKF D+++ + + +                   +   ++D + R  +
Sbjct: 74  HNNNQNNTYKLGLNKFADMTNEEYRVM-------------------YFGTKSDAKRRLMK 114

Query: 139 FNSLRH------GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNL 192
             S  H      GD LP   DWR +G ++ +K+QG C  CWAFS V  VEA++ I     
Sbjct: 115 TKSTGHRYAYSAGDQLPVHVDWRVKGAVAPIKDQGSCGSCWAFSTVATVEAINKIVTGKF 174

Query: 193 TELSVQ 198
             LS Q
Sbjct: 175 VSLSEQ 180


>gi|357130141|ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
           distachyon]
          Length = 457

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 158/300 (52%), Gaps = 38/300 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K Y+S E+ L R E F  N++  +    E + +   G+N+F DL+  + +
Sbjct: 149 LFEKWLAKHQKAYASFEEKLHRFEVFKDNLKHIDKVNREVT-SYWLGLNEFADLTHEEFK 207

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
                   +T   + P   A  S         +F++  +   DDLP++ DWR +G +++V
Sbjct: 208 --------ATYLGLAPPAPARESRG-------SFKYEDVS-ADDLPKSVDWRTKGAVTEV 251

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYI 370
           K QG+C  CWAFS V  VE ++AI   +LT LS Q+L+DC +  N GCNGG MD A  YI
Sbjct: 252 KNQGQCGSCWAFSTVAAVEGINAIVTGNLTALSEQELIDCSVDGNNGCNGGLMDYAFSYI 311

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEE-EGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
             +GG+ +++AYPY   E    C  G++ E   V +  Y  +P   E+ + K +A + P+
Sbjct: 312 ASSGGLHTEEAYPYLMEEGS--CGDGKKSESEAVTISGYEDVPAHNEQALIKALAHQ-PV 368

Query: 430 SVGMNANG--LFYYSGGVID------LNQRLY--------GTSIPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV D      L+  +         G    Y IV+NSWG+ WGEK
Sbjct: 369 SVAIEASGRHFQFYSGGVFDGPCGTQLDHGVAAVGYGSDKGKGHDYIIVRNSWGAKWGEK 428



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 14/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DC +  N GCNGG MD A  YI  +GG+ +++AYPY   E  
Sbjct: 272 INAIVTGNLTALSEQELIDCSVDGNNGCNGGLMDYAFSYIASSGGLHTEEAYPYLMEEGS 331

Query: 549 RGCLVGEE-EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
             C  G++ E   V +  Y  +P   E+ + K +A + P+SV + A+G    +YSGGV D
Sbjct: 332 --CGDGKKSESEAVTISGYEDVPAHNEQALIKALAHQ-PVSVAIEASGRHFQFYSGGVFD 388

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H +  VGYG ++   G    Y IV+NSWG+ WGEK
Sbjct: 389 ---GPCGTQL-DHGVAAVGYGSDK---GKGHDYIIVRNSWGAKWGEK 428



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 17/157 (10%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +  F  ++  H K Y+S E+ L R E F  N++  +   RE + +    +N+F DL+  +
Sbjct: 147 IELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKHIDKVNREVT-SYWLGLNEFADLTHEE 205

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +        +T   + P   A  S         +F++  +   DDLP++ DWR +G ++
Sbjct: 206 FK--------ATYLGLAPPAPARESRG-------SFKYEDVS-ADDLPKSVDWRTKGAVT 249

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +VK QG+C  CWAFS V  VE ++AI   NLT LS Q
Sbjct: 250 EVKNQGQCGSCWAFSTVAAVEGINAIVTGNLTALSEQ 286


>gi|394331739|gb|AFN27092.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++        L+
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEF---AARYLN 100

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                      A     +   ++ A           +P+A DWR +G ++ VK QG C  
Sbjct: 101 GAAYFAAAKQHAGQHCRKARADLSA-----------VPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   +   C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 16/163 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++        L+           A     +   ++ A           +P+A DWR
Sbjct: 88  DLSEAEF---AARYLNGAAYFAAAKQHAGQHCRKARADLSA-----------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQ 176


>gi|356541074|ref|XP_003539008.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 363

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 161/327 (49%), Gaps = 63/327 (19%)

Query: 184 MHAIQGNNLTELSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTA 235
           M  ++G+ +  L  +HH         K Y+S E+   R E F  N+ +A  +QS D  +A
Sbjct: 32  MQVVEGSGV-RLGAEHHFLDFKRRFGKAYASQEEHNYRFEVFKANMRRARRHQSLDP-SA 89

Query: 236 VFGVNKFFDLSESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD 294
             GV +F DL+ S+ + ++ GL            ++ P ++N+            +   D
Sbjct: 90  AHGVTRFSDLTASEFRNKVLGLR----------GVRLPSNANKA----------PILPTD 129

Query: 295 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM- 353
           +LP  FDWR  G ++ VK QG C  CW+FS  G +E  H +    L  LS QQLVDCD  
Sbjct: 130 NLPSDFDWRDHGAVTPVKNQGSCGSCWSFSTTGALEGAHFLSTGELVSLSEQQLVDCDHE 189

Query: 354 --------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKV 405
                    + GCNGG M+ A +YI+ +GGV+ ++ YPY  S ++RG    ++      V
Sbjct: 190 CDPEEAGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPY--SGTDRGNCKFDKAKIAASV 247

Query: 406 KEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQRL--------YG 454
             +S I   +E+++   +   GPL+V +NA  +  Y GGV      ++RL        YG
Sbjct: 248 ANFSVISL-DEDQIAANLVKNGPLAVAINAAYMQTYIGGVSCPYICSRRLDHGVLLVGYG 306

Query: 455 TSI---------PYWIVKNSWGSDWGE 472
           +           P+WI+KNSWG +WGE
Sbjct: 307 SGAYAPIRMKEKPFWIIKNSWGENWGE 333



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 45/225 (20%)

Query: 447 DLNQRLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS-KLSRLAT 503
           D + R +G   P   VKN  S GS W          S + T  LE    L + +L  L+ 
Sbjct: 134 DFDWRDHGAVTP---VKNQGSCGSCW----------SFSTTGALEGAHFLSTGELVSLSE 180

Query: 504 EKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           ++LVDCD           + GCNGG M+ A +YI+ +GGV+ ++ YPY  S ++RG    
Sbjct: 181 QQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPY--SGTDRGNCKF 238

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           ++      V  +S I   +E+++   +   GPL+V +NA  +  Y GGV      +C+ +
Sbjct: 239 DKAKIAASVANFSVISL-DEDQIAANLVKNGPLAVAINAAYMQTYIGGVS--CPYICS-R 294

Query: 615 AQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
             +H +++VGYG         +EK      P+WI+KNSWG +WGE
Sbjct: 295 RLDHGVLLVGYGSGAYAPIRMKEK------PFWIIKNSWGENWGE 333



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 22/156 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            FL+F R   K Y+S E+   R E F  N+ +A  +Q  D  +A   V +F DL+ S+ +
Sbjct: 47  HFLDFKRRFGKAYASQEEHNYRFEVFKANMRRARRHQSLDP-SAAHGVTRFSDLTASEFR 105

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            ++ GL            ++ P ++N+            +   D+LP  FDWR  G ++ 
Sbjct: 106 NKVLGLR----------GVRLPSNANKA----------PILPTDNLPSDFDWRDHGAVTP 145

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CW+FS  G +E  H +    L  LS Q
Sbjct: 146 VKNQGSCGSCWSFSTTGALEGAHFLSTGELVSLSEQ 181


>gi|45822209|emb|CAE47501.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 325

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 166/344 (48%), Gaps = 49/344 (14%)

Query: 178 VGVVEAMHAIQGNNLTELSVQ---HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE---D 231
           + +  A  A+Q  N  E  VQ    ++K Y S  +   R   F  N+ K E++  +    
Sbjct: 5   IFIFLATAAVQALNDKEEWVQFKVKNNKSYKSYVEEQTRFRIFQENLRKIENHNEKYNNG 64

Query: 232 SGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPS-LQAPFSSNQTDTEMRAFQFNSL 290
             T  FGV KF DL+E +   L  L+ ++       + L AP                  
Sbjct: 65  ESTFKFGVTKFTDLTEKEFLDLLVLSKNARPNRTHATHLLAPLR---------------- 108

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVD 350
               DLP AFDWR +G +++VK+QG C  CW FS  G VEA H ++  +L  LS Q LVD
Sbjct: 109 ----DLPSAFDWRDKGAVTEVKDQGMCGSCWTFSTTGSVEAAHFLKTGNLVSLSEQNLVD 164

Query: 351 CDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
           C      GC GG MD AL+Y I+ GG++S++ YPY+  +    C   +      K+  ++
Sbjct: 165 CAKDTCYGCGGGWMDKALEY-IEKGGIMSEKDYPYEGVDD--NCRF-DISKVAAKISNFT 220

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNANGLF-YYSGGVID----------LNQRL----YG 454
            I   +EE++K  VA +GP+SV ++A+  F  Y  G++D          LN  +    YG
Sbjct: 221 YIKKNDEEDLKNAVAAKGPISVAIDASATFQLYVSGILDDTECSNEFDSLNHGVLVVGYG 280

Query: 455 TS--IPYWIVKNSWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS 496
           T     YWI+KNSWG +WG     ++  + N    +   GV P+
Sbjct: 281 TENGKDYWIIKNSWGVNWGMDGYIRMSRNKNNQCGITTDGVYPN 324



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 89/155 (57%), Gaps = 11/155 (7%)

Query: 498 LSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           L  L+ + LVDC      GC GG MD AL+YI + GG++S++ YPY+  +    C   + 
Sbjct: 154 LVSLSEQNLVDCAKDTCYGCGGGWMDKALEYI-EKGGIMSEKDYPYEGVDDN--CRF-DI 209

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF-YYSGGVIDLNQRLCNPKA 615
                K+  ++ I   +EE++K  VA +GP+SV ++A+  F  Y  G++D  +      +
Sbjct: 210 SKVAAKISNFTYIKKNDEEDLKNAVAAKGPISVAIDASATFQLYVSGILDDTECSNEFDS 269

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
            NH +++VGYG E  KD     YWI+KNSWG +WG
Sbjct: 270 LNHGVLVVGYGTENGKD-----YWIIKNSWGVNWG 299



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 24/159 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY-QREDSGTAVFE--VNKFFDLSDSD 101
           ++ F   ++K Y S  +   R   F  N+ K E++ ++ ++G + F+  V KF DL++ +
Sbjct: 23  WVQFKVKNNKSYKSYVEEQTRFRIFQENLRKIENHNEKYNNGESTFKFGVTKFTDLTEKE 82

Query: 102 LQQLTGLNLDSTLEDIQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
              L  L+ ++       + L AP                      DLP AFDWR +G +
Sbjct: 83  FLDLLVLSKNARPNRTHATHLLAPLR--------------------DLPSAFDWRDKGAV 122

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++VK+QG C  CW FS  G VEA H ++  NL  LS Q+
Sbjct: 123 TEVKDQGMCGSCWTFSTTGSVEAAHFLKTGNLVSLSEQN 161


>gi|147809367|emb|CAN64491.1| hypothetical protein VITISV_015725 [Vitis vinifera]
          Length = 321

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 152/309 (49%), Gaps = 54/309 (17%)

Query: 195 LSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL- 253
           + ++ + K YSS E+ + R   F  N+ +A ++Q+ D   A+ GV  F DLSE + +++ 
Sbjct: 9   MFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDP-XALHGVTPFSDLSEEEFERMF 67

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
           TG+         +P ++   +      E+           D LPE+FDWR +G +++VK 
Sbjct: 68  TGVVG-------RPHMKGGVAETAAALEV-----------DGLPESFDWREKGAVTEVKM 109

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNGGCNGGRMD 364
           QG C  CWAFS  G VE  H I    L  LS QQLVDCD           + GC GG M 
Sbjct: 110 QGTCGSCWAFSTTGAVEGAHFISTKKLLTLSEQQLVDCDHMCDIRDKXACDSGCEGGLMT 169

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
           +A +Y+I+ GG+  + +YPY     E  C   + +   V+V  ++ +P  +E ++   + 
Sbjct: 170 NAYKYLIEAGGLEEESSYPYTGKHGE--CKF-KPDRVAVRVVNFTEVPI-BENQIAANLV 225

Query: 425 TRGPLSVGMNANGLFYYSGGV----------IDLNQRLYGTSI-----------PYWIVK 463
             GPL+VG+NA  +  Y GGV          I+    L G              PYWI+K
Sbjct: 226 CHGPLAVGLNAXFMQTYIGGVSCPLICPKRWINHGVLLVGYGAKGYSILRFGYKPYWIIK 285

Query: 464 NSWGSDWGE 472
           NSWG  WGE
Sbjct: 286 NSWGXRWGE 294



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 25/170 (14%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GC GG M +A +Y+I+ GG+  + +YPY     
Sbjct: 135 KLLTLSEQQLVDCDHMCDIRDKXACDSGCEGGLMTNAYKYLIEAGGLEEESSYPYTGKHG 194

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           E  C   + +   V+V  ++ +P  +E ++   +   GPL+VG+NA  +  Y GGV    
Sbjct: 195 E--CKF-KPDRVAVRVVNFTEVPI-BENQIAANLVCHGPLAVGLNAXFMQTYIGGVS--C 248

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGE 651
             +C  +  NH +++VGYG +    G SI      PYWI+KNSWG  WGE
Sbjct: 249 PLICPKRWINHGVLLVGYGAK----GYSILRFGYKPYWIIKNSWGXRWGE 294



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 20/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  FM  + K YSS E+ + R   F  N+ +A ++Q  D   A+  V  F DLS+ + ++
Sbjct: 7   FRMFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDP-XALHGVTPFSDLSEEEFER 65

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           + TG+         +P ++   +      E+           D LPE+FDWR +G +++V
Sbjct: 66  MFTGVVG-------RPHMKGGVAETAAALEV-----------DGLPESFDWREKGAVTEV 107

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS  G VE  H I    L  LS Q
Sbjct: 108 KMQGTCGSCWAFSTTGAVEGAHFISTKKLLTLSEQ 142


>gi|50355615|dbj|BAD29956.1| cysteine protease [Daucus carota]
          Length = 423

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 165/322 (51%), Gaps = 44/322 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V+HH K Y+++    +R E F  N+   +++    + +   G+NKF DLS  + + +   
Sbjct: 12  VKHH-KNYNALGAKEKRFEIFKDNLRFIDEHNKGVNQSFKLGLNKFADLSNEEYKSM--- 67

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG--DDLPEAFDWRAEGVISKVKEQ 314
                           F   +   + + F+ +  ++G  D+LP++ DWR +G ++ VK+Q
Sbjct: 68  ----------------FLGGRMVRDRKGFESDRFKYGVGDELPQSVDWREKGAVAPVKDQ 111

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDN 373
           G+C  CWAFS V  VE ++ I    L  LS Q+LVDCD   N GCNGG MD A ++I+ N
Sbjct: 112 GQCGSCWAFSTVAAVEGINQIATGDLISLSEQELVDCDKGFNQGCNGGFMDYAFEFIVKN 171

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++  YPYK  + +  C    +    V +  +  +P  +E+ +KK VA + P+SV +
Sbjct: 172 GGIDTEDDYPYKGVDGQ--CDQNRKNAKVVTINGFEDVPQNDEKSLKKAVAHQ-PVSVAI 228

Query: 434 NANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE----KVE 475
            A G  +  Y  G+       DL+  +    YGT     YWIV+NSWG +WGE    ++E
Sbjct: 229 EAGGRAFQLYESGIFNGLCGTDLDHGVVAVGYGTEDGKDYWIVRNSWGPNWGENGYIRLE 288

Query: 476 DKVGSSGNRTRDLELTGVLPSK 497
             V S+      + +    P+K
Sbjct: 289 RNVASTNTGKCGIAMQPSYPTK 310



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 15/157 (9%)

Query: 498 LSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           L  L+ ++LVDCD   N GCNGG MD A ++I+ NGG+ ++  YPYK  + +  C    +
Sbjct: 137 LISLSEQELVDCDKGFNQGCNGGFMDYAFEFIVKNGGIDTEDDYPYKGVDGQ--CDQNRK 194

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPK 614
               V +  +  +P  +E+ +KK VA + P+SV + A G  +  Y  G+ +    LC   
Sbjct: 195 NAKVVTINGFEDVPQNDEKSLKKAVAHQ-PVSVAIEAGGRAFQLYESGIFN---GLCGTD 250

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +H ++ VGYG E+ KD     YWIV+NSWG +WGE
Sbjct: 251 L-DHGVVAVGYGTEDGKD-----YWIVRNSWGPNWGE 281



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 25/160 (15%)

Query: 45  FLNFMR----DHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDS 100
           F  FM      H K Y+++    +R E F  N+   +++ +  + +    +NKF DLS+ 
Sbjct: 3   FCPFMSPGLVKHHKNYNALGAKEKRFEIFKDNLRFIDEHNKGVNQSFKLGLNKFADLSNE 62

Query: 101 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG--DDLPEAFDWRAEG 158
           + + +                   F   +   + + F+ +  ++G  D+LP++ DWR +G
Sbjct: 63  EYKSM-------------------FLGGRMVRDRKGFESDRFKYGVGDELPQSVDWREKG 103

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            ++ VK+QG+C  CWAFS V  VE ++ I   +L  LS Q
Sbjct: 104 AVAPVKDQGQCGSCWAFSTVAAVEGINQIATGDLISLSEQ 143


>gi|157864853|ref|XP_001681135.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|157864857|ref|XP_001681137.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124429|emb|CAJ02285.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124431|emb|CAJ02287.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 443

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 13/164 (7%)

Query: 492 GVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESER 549
            V   KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   + 
Sbjct: 164 AVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDV 223

Query: 550 G-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
             C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+    
Sbjct: 224 PECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS-- 280

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 281 --CIGEQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q 
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQQ 177


>gi|355681666|gb|AER96819.1| cathepsin W [Mustela putorius furo]
          Length = 373

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 155/315 (49%), Gaps = 53/315 (16%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           EL    +++ YS+ ++   R E F  N+ +A+  + ED  TA FG+  F DL+E + +QL
Sbjct: 43  ELFRAQYNRSYSNPKEYAHRLEIFAHNLAQAQKMEVEDLATAEFGMTPFSDLTEEEFEQL 102

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA-EGVISKVK 312
            G       + I P  + P    +  +E+           + +P + DWR  +GV S +K
Sbjct: 103 HGH------QKITPG-ETPAVGRKVGSEVVM---------ESVPASCDWRKLKGVKSPIK 146

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
           EQG C CCWA +A G +EA+ +I+ N   ++SVQ+L+DC+    GC GG + DA   +++
Sbjct: 147 EQGNCNCCWAMAAAGNIEALWSIRYNQSVQVSVQELLDCNRCGDGCKGGFVWDAFVTVLN 206

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           N G+ S++ YP++ S     CL    +  KV   +   +    E+ M  ++AT GP++V 
Sbjct: 207 NSGLASEKDYPFRGSLKRHKCLASNYK--KVAWIQDFIMLQNNEQTMANYLATHGPITVT 264

Query: 433 MNANGLFYYSGGVIDLN--------------------------QRLYG--------TSIP 458
           +N   L  Y  GVI                             +R  G          IP
Sbjct: 265 INMKLLQQYKKGVIKATPATCDPYLVNHSVLLVGFGKTNSSERRRAKGGHFWPHPHRPIP 324

Query: 459 YWIVKNSWGSDWGEK 473
           YWI+KNSWG++WGE+
Sbjct: 325 YWILKNSWGAEWGEE 339



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 15/166 (9%)

Query: 500 RLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 559
           +++ ++L+DC+    GC GG + DA   +++N G+ S++ YP++ S     CL    +  
Sbjct: 176 QVSVQELLDCNRCGDGCKGGFVWDAFVTVLNNSGLASEKDYPFRGSLKRHKCLASNYK-- 233

Query: 560 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHA 619
           KV   +   +    E+ M  ++AT GP++V +N   L  Y  GVI      C+P   NH+
Sbjct: 234 KVAWIQDFIMLQNNEQTMANYLATHGPITVTINMKLLQQYKKGVIKATPATCDPYLVNHS 293

Query: 620 LIIVGYG-----EEEKKDG--------TSIPYWIVKNSWGSDWGEK 652
           +++VG+G     E  +  G          IPYWI+KNSWG++WGE+
Sbjct: 294 VLLVGFGKTNSSERRRAKGGHFWPHPHRPIPYWILKNSWGAEWGEE 339



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 17/155 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F   +++ YS+ ++   R E F  N+ +A+  + ED  TA F +  F DL++ + +Q
Sbjct: 42  FELFRAQYNRSYSNPKEYAHRLEIFAHNLAQAQKMEVEDLATAEFGMTPFSDLTEEEFEQ 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA-EGVISKV 163
           L G       + I P  + P    +  +E+           + +P + DWR  +GV S +
Sbjct: 102 LHGH------QKITPG-ETPAVGRKVGSEVVM---------ESVPASCDWRKLKGVKSPI 145

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           KEQG C CCWA +A G +EA+ +I+ N   ++SVQ
Sbjct: 146 KEQGNCNCCWAMAAAGNIEALWSIRYNQSVQVSVQ 180


>gi|356515036|ref|XP_003526207.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 336

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 153/306 (50%), Gaps = 41/306 (13%)

Query: 184 MHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFF 243
           +H        E  +  + KVY    +  +R + F  NVE  E + ++ +     GVN   
Sbjct: 29  LHETSMRERHEQWMTEYGKVYKDAAEKDKRFQIFKDNVEFIESFNADGNKPYKLGVNHLA 88

Query: 244 DLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 303
           DL               T+E+ + S       ++  T    F++ ++     +P A DWR
Sbjct: 89  DL---------------TVEEFKASRNGFKRPHEFST--TTFKYENVT---AIPAAIDWR 128

Query: 304 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGG 361
            +G ++ +K+QG+C  CWAFS +   E +H I    L  LS Q+LVDCD    + GC GG
Sbjct: 129 TKGAVTPIKDQGQCGSCWAFSTIAATEGIHQITTGKLVSLSEQELVDCDTKGVDQGCEGG 188

Query: 362 RMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKK 421
            M+D  ++II NGG+ S+  YPYKA + +      +      ++K Y ++P   E  ++K
Sbjct: 189 YMEDGFEFIIKNGGITSETNYPYKAVDGK----CNKATSPVAQIKGYEKVPPNSETALQK 244

Query: 422 WVATRGPLSVGMNAN--GLFYYSGGV------IDLNQRL----YGTS--IPYWIVKNSWG 467
            VA + P+SV ++A+  G  +YS G+       +L+  +    YGT+    YWIVKNSWG
Sbjct: 245 AVANQ-PVSVSIDADGAGFMFYSSGIYNGECGTELDHGVTAVGYGTANGTDYWIVKNSWG 303

Query: 468 SDWGEK 473
           + WGEK
Sbjct: 304 TQWGEK 309



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 18/164 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           +   KL  L+ ++LVDCD    + GC GG M+D  ++II NGG+ S+  YPYKA + +  
Sbjct: 160 ITTGKLVSLSEQELVDCDTKGVDQGCEGGYMEDGFEFIIKNGGITSETNYPYKAVDGK-- 217

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQ 608
               +      ++K Y ++P   E  ++K VA + P+SV ++A+  G  +YS G+ +   
Sbjct: 218 --CNKATSPVAQIKGYEKVPPNSETALQKAVANQ-PVSVSIDADGAGFMFYSSGIYNGE- 273

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  +H +  VGYG     D     YWIVKNSWG+ WGEK
Sbjct: 274 --CGTEL-DHGVTAVGYGTANGTD-----YWIVKNSWGTQWGEK 309



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 20/155 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M ++ KVY    +  +R + F  NVE  E +  + +      VN   DL      
Sbjct: 37  RHEQWMTEYGKVYKDAAEKDKRFQIFKDNVEFIESFNADGNKPYKLGVNHLADL------ 90

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                    T+E+ + S       ++  T    F++ ++     +P A DWR +G ++ +
Sbjct: 91  ---------TVEEFKASRNGFKRPHEFST--TTFKYENVT---AIPAAIDWRTKGAVTPI 136

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFS +   E +H I    L  LS Q
Sbjct: 137 KDQGQCGSCWAFSTIAATEGIHQITTGKLVSLSEQ 171


>gi|393660044|gb|AFN09033.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 166/338 (49%), Gaps = 47/338 (13%)

Query: 177 AVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           AV    A   ++  N  E  V   +K YSS  + LRR + F  N+ +  +    DS  A 
Sbjct: 12  AVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRH 292
           + +NKF DLS+ + + + TGL+L +  ++    +   Q P                    
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG----------------- 112

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
               P  FDWR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS QQ++DCD
Sbjct: 113 ----PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD 168

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A + II  GGV  +  YPY+A  +   C +   + F V+VK+  R  
Sbjct: 169 FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNSNK-FLVQVKDCYRYI 225

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYW 460
              EE++K  +   GP+ + ++A  +  Y  G+I       LN  +    YG   +IPYW
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIKYCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +V+  + + G R  +L  T V+
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRN-ELASTAVI 322



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A + II  GGV  +  YPY+A  +   C +  
Sbjct: 154 NELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNS 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  G+I    + C    
Sbjct: 212 NK-FLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII----KYCFNSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      +IPYW  KN+WG+DWGE
Sbjct: 267 LNHAVLLVGYGVE-----NNIPYWTFKNTWGTDWGE 297



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 27/159 (16%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLS-DSDLQ 103
           F  F+   +K YSS  + LRR + F  N+ +  +  + DS  A +E+NKF DLS D  + 
Sbjct: 28  FEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AKYEINKFSDLSKDETIA 85

Query: 104 QLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
           + TGL+L +  ++    +   Q P                        P  FDWR    +
Sbjct: 86  KYTGLSLPTQTQNFCKVILLDQPPGKG---------------------PLEFDWRRLNKV 124

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + VK QG C  CWAF+ +G +E+  AI+ N L  LS Q 
Sbjct: 125 TSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQ 163


>gi|237643659|ref|YP_002884349.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus]
 gi|229358205|gb|ACQ57300.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus]
          Length = 323

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 166/338 (49%), Gaps = 47/338 (13%)

Query: 177 AVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           AV    A   ++  N  E  V   +K YSS  + LRR + F  N+ +  +    DS  A 
Sbjct: 12  AVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRH 292
           + +NKF DLS+ + + + TGL+L +  ++    +   Q P                    
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVIILDQPPGKG----------------- 112

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
               P  FDWR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS QQ++DCD
Sbjct: 113 ----PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD 168

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A + II  GGV  +  YPY+A  +   C +   + F V+VK+  R  
Sbjct: 169 FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNSNK-FLVQVKDCYRYI 225

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYW 460
              EE++K  +   GP+ + ++A  +  Y  G+I       LN  +    YG   +IPYW
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIKYCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +V+  + + G R  +L  T V+
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRN-ELASTAVI 322



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A + II  GGV  +  YPY+A  +   C +  
Sbjct: 154 NELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNS 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  G+I    + C    
Sbjct: 212 NK-FLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII----KYCFNSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      +IPYW  KN+WG+DWGE
Sbjct: 267 LNHAVLLVGYGVE-----NNIPYWTFKNTWGTDWGE 297



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 28/166 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P   F  F+   +K YSS  + LRR + F  N+ +  +  + DS  A +E+NKF DL
Sbjct: 22  LKAP-NYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AKYEINKFSDL 78

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 153
           S D  + + TGL+L +  ++    +   Q P                        P  FD
Sbjct: 79  SKDETIAKYTGLSLPTQTQNFCKVIILDQPPGKG---------------------PLEFD 117

Query: 154 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           WR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS Q 
Sbjct: 118 WRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQ 163


>gi|393717160|gb|AFN21082.1| V-Cath [Bombyx mori NPV]
 gi|393717442|gb|AFN21362.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 166/338 (49%), Gaps = 47/338 (13%)

Query: 177 AVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           AV    A   ++  N  E  V   +K YSS  + LRR + F  N+ +  +    DS  A 
Sbjct: 12  AVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRH 292
           + +NKF DLS+ + + + TGL+L +  ++    +   Q P                    
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG----------------- 112

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
               P  FDWR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS QQ++DCD
Sbjct: 113 ----PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD 168

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A + II  GGV  +  YPY+A  +   C +   + F V+VK+  R  
Sbjct: 169 FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNSNK-FLVQVKDCYRYI 225

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYW 460
              EE++K  +   GP+ + ++A  +  Y  G+I       LN  +    YG   +IPYW
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIKYCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +V+  + + G R  +L  T V+
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRN-ELASTAVI 322



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A + II  GGV  +  YPY+A  +   C +  
Sbjct: 154 NELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNS 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  G+I    + C    
Sbjct: 212 NK-FLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII----KYCFDSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      +IPYW  KN+WG+DWGE
Sbjct: 267 LNHAVLLVGYGVE-----NNIPYWTFKNTWGTDWGE 297



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 28/166 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P   F  F+   +K YSS  + LRR + F  N+ +  +  + DS  A +E+NKF DL
Sbjct: 22  LKAP-NYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AKYEINKFSDL 78

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 153
           S D  + + TGL+L +  ++    +   Q P                        P  FD
Sbjct: 79  SKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG---------------------PLEFD 117

Query: 154 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           WR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS Q 
Sbjct: 118 WRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQ 163


>gi|1353726|gb|AAB01769.1| cysteine proteinase homolog, partial [Naegleria fowleri]
          Length = 347

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 147/304 (48%), Gaps = 47/304 (15%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           + + KVY + E+   R++ F  NVEK+  Y +       FG+ KF DL+  + +++  L 
Sbjct: 38  RKYAKVYGT-EEHNNRYQIFKANVEKSR-YYNHVGKRENFGITKFSDLTPEEFKRMF-LM 94

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
              T E+ +  L AP  +  ++ E++             P +FDWR  G +++VK QG C
Sbjct: 95  KTYTPEEAKKILAAPQHAVLSEKEVQT-----------APTSFDWRQHGAVTRVKNQGAC 143

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS----------NGGCNGGRMDDAL 367
             CW FS  G VE   AI+   L  LS QQLVDCD +          + GCNGG M  A 
Sbjct: 144 GSCWTFSTTGNVEGQWAIKKGKLVSLSEQQLVDCDHNCVTYQNQQACDSGCNGGLMWSAF 203

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           QY+I NGG+ ++ +YPY+  +    C   +                 +E +M  W+A  G
Sbjct: 204 QYVIKNGGLDTEDSYPYEGVDDT--CRFNKSN--VAATISSWTSISSDENQMAAWLAANG 259

Query: 428 PLSVGMNANGLFYYSGGVID-------------------LNQRLYGTSIPYWIVKNSWGS 468
           P+S+ +NA  L YY+ G+ D                   + +   G+   YWIVKNSWGS
Sbjct: 260 PISIAINAEWLQYYTSGISDPWFCNPQDLDHGVLIVGYGVGKSWLGSEENYWIVKNSWGS 319

Query: 469 DWGE 472
           DWGE
Sbjct: 320 DWGE 323



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 16/165 (9%)

Query: 497 KLSRLATEKLVDCDMS----------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASE 546
           KL  L+ ++LVDCD +          + GCNGG M  A QY+I NGG+ ++ +YPY+  +
Sbjct: 165 KLVSLSEQQLVDCDHNCVTYQNQQACDSGCNGGLMWSAFQYVIKNGGLDTEDSYPYEGVD 224

Query: 547 SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDL 606
               C   +                 +E +M  W+A  GP+S+ +NA  L YY+ G+ D 
Sbjct: 225 DT--CRFNKSN--VAATISSWTSISSDENQMAAWLAANGPISIAINAEWLQYYTSGISD- 279

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               CNP+  +H ++IVGYG  +   G+   YWIVKNSWGSDWGE
Sbjct: 280 -PWFCNPQDLDHGVLIVGYGVGKSWLGSEENYWIVKNSWGSDWGE 323



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 22/159 (13%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY----QREDSGTAVFEVNKFFDLSDS 100
           F+ F R + KVY + E+   R++ F  NVEK+  Y    +RE+     F + KF DL+  
Sbjct: 33  FIKFSRKYAKVYGT-EEHNNRYQIFKANVEKSRYYNHVGKREN-----FGITKFSDLTPE 86

Query: 101 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
           + +++  L    T E+ +  L AP  +  ++ E++             P +FDWR  G +
Sbjct: 87  EFKRMF-LMKTYTPEEAKKILAAPQHAVLSEKEVQT-----------APTSFDWRQHGAV 134

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++VK QG C  CW FS  G VE   AI+   L  LS Q 
Sbjct: 135 TRVKNQGACGSCWTFSTTGNVEGQWAIKKGKLVSLSEQQ 173


>gi|242071345|ref|XP_002450949.1| hypothetical protein SORBIDRAFT_05g021550 [Sorghum bicolor]
 gi|241936792|gb|EES09937.1| hypothetical protein SORBIDRAFT_05g021550 [Sorghum bicolor]
          Length = 371

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 142/273 (52%), Gaps = 28/273 (10%)

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD---------DLPEAFDWRAEG 306
           L L+   +      +  +++       RA      RHGD         +LP A DWR  G
Sbjct: 89  LALNKFADMTTDEFRRAYAAGSRTRHHRALSSGIRRHGDGSFMYAQAGNLPLAVDWRQRG 148

Query: 307 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC-DMSNGGCNGGRMDD 365
            ++ +K+QG+C  CWAFS +  VE ++ I+   L  LS Q+LVDC D+ N GCNGG MD 
Sbjct: 149 AVTGIKDQGQCGSCWAFSTIAAVEGINKIRTGKLVSLSEQELVDCDDVDNQGCNGGLMDY 208

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
           A QYI  NGG+ ++  YPY A   +R C   +E    V +  Y  +P   E+ ++K VA 
Sbjct: 209 AFQYIKRNGGITTESNYPYLA--EQRSCNKAKERSHDVTIDGYEDVPANNEDALQKAVAN 266

Query: 426 RGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDW 470
           + P+S+ + A+G    +YS GV       +L+  +    YG +     YWIVKNSWG DW
Sbjct: 267 Q-PVSIAIEASGQDFQFYSEGVFTGSCGTELDHGVAAVGYGITRDGTKYWIVKNSWGEDW 325

Query: 471 GEKVEDKVGSSGNRTRDLELTGVLPSKLSRLAT 503
           GE+   ++    + ++ L    + PS  +++AT
Sbjct: 326 GERGYIRMQRGISDSQGLCGIAMEPSYPTKIAT 358



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 14/166 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +   KL  L+ ++LVDCD + N GCNGG MD A QYI  NGG+ ++  YPY A   +
Sbjct: 174 INKIRTGKLVSLSEQELVDCDDVDNQGCNGGLMDYAFQYIKRNGGITTESNYPYLA--EQ 231

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
           R C   +E    V +  Y  +P   E+ ++K VA + P+S+ + A+G    +YS GV   
Sbjct: 232 RSCNKAKERSHDVTIDGYEDVPANNEDALQKAVANQ-PVSIAIEASGQDFQFYSEGVFTG 290

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +   C  +  +H +  VGYG    +DGT   YWIVKNSWG DWGE+
Sbjct: 291 S---CGTEL-DHGVAAVGYG--ITRDGTK--YWIVKNSWGEDWGER 328



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 9/100 (9%)

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD---------DLPEAFDWRAEG 158
           L L+   +      +  +++       RA      RHGD         +LP A DWR  G
Sbjct: 89  LALNKFADMTTDEFRRAYAAGSRTRHHRALSSGIRRHGDGSFMYAQAGNLPLAVDWRQRG 148

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            ++ +K+QG+C  CWAFS +  VE ++ I+   L  LS Q
Sbjct: 149 AVTGIKDQGQCGSCWAFSTIAAVEGINKIRTGKLVSLSEQ 188


>gi|32396020|gb|AAP41847.1| senescence-associated cysteine protease [Anthurium andraeanum]
          Length = 460

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 150/287 (52%), Gaps = 31/287 (10%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDY-QSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDS 260
           K Y+ + +  RR E F  N+   +D+ ++E++ +   G+ +F DL+  + +        S
Sbjct: 47  KAYNLLGEKERRFEIFWDNLRYIDDHNRAENNHSYTLGLTRFADLTNEEYR--------S 98

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACC 320
           T   ++P    P  +N+     R    N    GDDLP+  DWR +G ++ +K+QG C  C
Sbjct: 99  TYLGVKPGQVRPRRANRAPGRGRDLSAN----GDDLPQKVDWREKGAVAPIKDQGGCGSC 154

Query: 321 WAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSD 379
           WAFS V  VE ++ I    L  LS Q+LVDCD + N GCNGG MD A Q+II NGG+ ++
Sbjct: 155 WAFSTVAAVEGINQIVTGDLIVLSEQELVDCDTAYNEGCNGGLMDYAFQFIISNGGIDTE 214

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
           + YPYK  E +  C    +    V +  Y  +   +E  +K  VA + P+SV +   G  
Sbjct: 215 EDYPYK--ERDGLCDPNRKNAKVVSIDSYEDVLENDEHALKTAVAHQ-PVSVAIEGGGRS 271

Query: 440 Y--YSGGV------IDLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           +  Y  G+      IDL+  +    YGT     YWIV+NSWG  WGE
Sbjct: 272 FQLYKSGIFDGRCGIDLDHGVVAVGYGTESGKDYWIVRNSWGKSWGE 318



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD + N GCNGG MD A Q+II NGG+ +++ YPYK  E +  C
Sbjct: 169 IVTGDLIVLSEQELVDCDTAYNEGCNGGLMDYAFQFIISNGGIDTEEDYPYK--ERDGLC 226

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +   +E  +K  VA + P+SV +   G  +  Y  G+ D    
Sbjct: 227 DPNRKNAKVVSIDSYEDVLENDEHALKTAVAHQ-PVSVAIEGGGRSFQLYKSGIFDGRCG 285

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +      +H ++ VGYG E  KD     YWIV+NSWG  WGE
Sbjct: 286 I----DLDHGVVAVGYGTESGKD-----YWIVRNSWGKSWGE 318



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 13/146 (8%)

Query: 54  KVYSSVEDLLRRHENFVTNVEKAEDYQR-EDSGTAVFEVNKFFDLSDSDLQQLTGLNLDS 112
           K Y+ + +  RR E F  N+   +D+ R E++ +    + +F DL++ + +        S
Sbjct: 47  KAYNLLGEKERRFEIFWDNLRYIDDHNRAENNHSYTLGLTRFADLTNEEYR--------S 98

Query: 113 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACC 172
           T   ++P    P  +N+     R    N    GDDLP+  DWR +G ++ +K+QG C  C
Sbjct: 99  TYLGVKPGQVRPRRANRAPGRGRDLSAN----GDDLPQKVDWREKGAVAPIKDQGGCGSC 154

Query: 173 WAFSAVGVVEAMHAIQGNNLTELSVQ 198
           WAFS V  VE ++ I   +L  LS Q
Sbjct: 155 WAFSTVAAVEGINQIVTGDLIVLSEQ 180


>gi|408009|gb|AAA18215.1| cysteine protease precursor [Trypanosoma congolense]
          Length = 444

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 165/341 (48%), Gaps = 40/341 (11%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVNVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  PEA DWR +G ++ VK+QG+C  CWAFSA+G +E    + G+ LT LS Q LV
Sbjct: 124 ----GKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD ++ GC GG MDDA ++I+  + G V ++Q+YPY +            +    K+++
Sbjct: 180 SCDTNDFGCEGGLMDDAFKWIVSSNKGNVFTEQSYPYASGGGNVPTCDKSGKVVGAKIRD 239

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----T 455
           +  +P  +E  + +W+A  GP+++ ++A     Y+GGV        +D    L G    +
Sbjct: 240 HVDLPE-DENAIAEWLAKNGPVAIAVDATSFQSYTGGVLTSCISEHLDHGVLLVGYDDTS 298

Query: 456 SIPYWIVKNSWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS 496
             PYWI+KNSW   WGE+     G S  R  +  L   LPS
Sbjct: 299 KPPYWIIKNSWSKGWGEE-----GYSALRRHNQCLMKNLPS 334



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 89/158 (56%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVG 554
           +L+ L+ + LV CD ++ GC GG MDDA ++I+  + G V ++Q+YPY +          
Sbjct: 169 ELTSLSEQMLVSCDTNDFGCEGGLMDDAFKWIVSSNKGNVFTEQSYPYASGGGNVPTCDK 228

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
             +    K++++  +P  +E  + +W+A  GP+++ ++A     Y+GGV+      C  +
Sbjct: 229 SGKVVGAKIRDHVDLPE-DENAIAEWLAKNGPVAIAVDATSFQSYTGGVLT----SCISE 283

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H +++VGY +  K      PYWI+KNSW   WGE+
Sbjct: 284 HLDHGVLLVGYDDTSKP-----PYWIIKNSWSKGWGEE 316



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                PEA DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVNVST-------------GKAPEAVDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFSA+G +E    + G+ LT LS Q
Sbjct: 142 KDQGQCGSCWAFSAIGNIEGQWKVAGHELTSLSEQ 176


>gi|394331826|gb|AFN27132.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 180/377 (47%), Gaps = 51/377 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWRKKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ LT LS QQLV CD  + GC+GG M  A ++++   NG + 
Sbjct: 150 CWAFSAVGSIESQWALAGHGLTALSEQQLVSCDDKDNGCSGGLMLQAFEWLLRNMNGTMF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKK--WVATRGPLSVGMN 434
           ++ +YPY +S      C    +     +++ Y  I   E  E  K  W+A  GP+S+ ++
Sbjct: 210 TEDSYPYVSSSGYVPECSNSSQLVPGARIEGYMTI---ESSETVKGAWLAKNGPISIAVD 266

Query: 435 ANGLFYYSGGVID------LNQ--RLYGTS----IPYWIVKNSWGSDWGEK--VEDKVGS 480
           A+    Y  GV+       LN    L G +    +PYW++KNSWG DWGEK  V   +G 
Sbjct: 267 ASSFMSYQSGVLTSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGEKGYVRVTMGV 326

Query: 481 SGNRTRDLELTGVLPSKLS-------------RLATEKLVDCDMS-NGGCNGGRMDDALQ 526
           +     +  ++  +P   +             R+  E+++  DMS   GC    +   + 
Sbjct: 327 NACLLTEYPVSAHVPQSPTPGPSTESEERAPKRVMVEQIICTDMSCRKGCRKTLLTANVC 386

Query: 527 YIIDNGGVVSDQAYPYK 543
           +    GG    +  P+K
Sbjct: 387 HPNGGGGSSMTKCSPHK 403



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 17/160 (10%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L+ L+ ++LV CD  + GC+GG M  A ++++ N  G + ++ +YPY +S      C   
Sbjct: 170 LTALSEQQLVSCDDKDNGCSGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNS 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKK--WVATRGPLSVGMNANGLFYYSGGVIDLNQRLCN 612
            +     +++ Y  I   E  E  K  W+A  GP+S+ ++A+    Y  GV+      C 
Sbjct: 230 SQLVPGARIEGYMTI---ESSETVKGAWLAKNGPISIAVDASSFMSYQSGVLTS----CA 282

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             A NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 283 GDALNHGVLLVGYNRTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ LT LS Q 
Sbjct: 134 KKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHGLTALSEQQ 177


>gi|182375363|gb|ACB87490.1| mucunain [Mucuna pruriens]
          Length = 422

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 159/302 (52%), Gaps = 40/302 (13%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           +L E  +  H K Y+++ +  +R + F  N+   +D+ + D+ T   G+N+F DL+  + 
Sbjct: 2   SLYEQWLVKHGKAYNALGEKDKRFDIFKDNLRFIDDHNA-DNRTYKLGLNRFADLTNEEY 60

Query: 251 Q-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
           + +  G  +D     ++   Q    SN+           + R GD+LPE+ DWR E  + 
Sbjct: 61  RARYLGTRIDPNRRFVKTKTQ----SNRY----------APRVGDNLPESVDWRNESAVL 106

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQ 368
            VK+QG C  CWAFS +G VE ++ I    L  LS Q+LVDCD S N GCNGG MD A +
Sbjct: 107 PVKDQGNCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAYE 166

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
           +II+NGG+ S++ YPY+A +    C    +    V +  Y  +P  +E  +KK VA + P
Sbjct: 167 FIINNGGIDSEEDYPYRAVDGT--CDQYRKNAKVVTIDSYEDVPANDELALKKAVANQ-P 223

Query: 429 LSVGMNANGL---FYYSG------------GVIDLNQRLYGT--SIPYWIVKNSWGSDWG 471
           +SV +   G     Y SG            GV+ +    YG+     YWIV+NSWG+ WG
Sbjct: 224 VSVAIEGGGREFQLYVSGVFTGRCGTALDHGVVAVG---YGSVKGHDYWIVRNSWGASWG 280

Query: 472 EK 473
           E+
Sbjct: 281 EE 282



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPY+A +  
Sbjct: 129 INKIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAYEFIINNGGIDSEEDYPYRAVDGT 188

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P  +E  +KK VA + P+SV +   G  +  Y  GV   
Sbjct: 189 --CDQYRKNAKVVTIDSYEDVPANDELALKKAVANQ-PVSVAIEGGGREFQLYVSGVF-- 243

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C   A +H ++ VGYG  +  D     YWIV+NSWG+ WGE+
Sbjct: 244 -TGRCG-TALDHGVVAVGYGSVKGHD-----YWIVRNSWGASWGEE 282



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 16/158 (10%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           ++ +  ++  H K Y+++ +  +R + F  N+   +D+   D+ T    +N+F DL++ +
Sbjct: 1   MSLYEQWLVKHGKAYNALGEKDKRFDIFKDNLRFIDDHN-ADNRTYKLGLNRFADLTNEE 59

Query: 102 LQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            + +  G  +D     ++   Q    SN+           + R GD+LPE+ DWR E  +
Sbjct: 60  YRARYLGTRIDPNRRFVKTKTQ----SNRY----------APRVGDNLPESVDWRNESAV 105

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             VK+QG C  CWAFS +G VE ++ I   +L  LS Q
Sbjct: 106 LPVKDQGNCGSCWAFSTIGAVEGINKIVTGDLISLSEQ 143


>gi|414879123|tpg|DAA56254.1| TPA: hypothetical protein ZEAMMB73_708930 [Zea mays]
          Length = 368

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 146/292 (50%), Gaps = 34/292 (11%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +V+    +  RR   F  N      +           +N+F D+   + +  +G  
Sbjct: 46  QTHHRVHRHHGEKGRRFGTFKENARFIHAHNKRGDRPYRLRLNRFGDMGREEFR--SGF- 102

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            DS + D++    A          +  F ++      DLP + DWR +G ++ VK QG+C
Sbjct: 103 ADSRINDLRREPTAA-------PAVPGFMYDD---ATDLPRSVDWRQKGAVTAVKNQGRC 152

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
             CWAFS V  VE ++AI+  SL  LS Q+L+DCD    GC GG M++A ++I  +GG+ 
Sbjct: 153 GSCWAFSTVVAVEGINAIRTGSLVSLSEQELIDCDTDENGCQGGLMENAFEFIKSHGGIT 212

Query: 378 SDQAYPYKASESERGCLVG--EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           ++ AYPY AS    G   G     G  V +  +  +P G E+ + K VA + P+SV ++A
Sbjct: 213 TESAYPYHASN---GTCDGARARRGRVVAIDGHQAVPAGSEDALAKAVAHQ-PVSVAIDA 268

Query: 436 NG--LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
            G  L +YS GV       DL+  +    YG S    PYWIVKNSWG  WGE
Sbjct: 269 GGQALQFYSEGVFTGDCGTDLDHGVAAVGYGVSDDGTPYWIVKNSWGPSWGE 320



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 91/168 (54%), Gaps = 20/168 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  +    L  L+ ++L+DCD    GC GG M++A ++I  +GG+ ++ AYPY AS    
Sbjct: 167 INAIRTGSLVSLSEQELIDCDTDENGCQGGLMENAFEFIKSHGGITTESAYPYHASN--- 223

Query: 550 GCLVG--EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI- 604
           G   G     G  V +  +  +P G E+ + K VA + P+SV ++A G  L +YS GV  
Sbjct: 224 GTCDGARARRGRVVAIDGHQAVPAGSEDALAKAVAHQ-PVSVAIDAGGQALQFYSEGVFT 282

Query: 605 -DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            D    L      +H +  VGYG  +  DGT  PYWIVKNSWG  WGE
Sbjct: 283 GDCGTDL------DHGVAAVGYGVSD--DGT--PYWIVKNSWGPSWGE 320



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 13/147 (8%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLD 111
           H +V+    +  RR   F  N      + +         +N+F D+   + +  +G   D
Sbjct: 48  HHRVHRHHGEKGRRFGTFKENARFIHAHNKRGDRPYRLRLNRFGDMGREEFR--SGF-AD 104

Query: 112 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 171
           S + D++    A          +  F ++      DLP + DWR +G ++ VK QG+C  
Sbjct: 105 SRINDLRREPTAA-------PAVPGFMYDD---ATDLPRSVDWRQKGAVTAVKNQGRCGS 154

Query: 172 CWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           CWAFS V  VE ++AI+  +L  LS Q
Sbjct: 155 CWAFSTVVAVEGINAIRTGSLVSLSEQ 181


>gi|357167196|ref|XP_003581047.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like
           [Brachypodium distachyon]
          Length = 338

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 164/328 (50%), Gaps = 52/328 (15%)

Query: 175 FSAVGVVEAMHAIQGNNLTE----LSVQH------HDKVYSSVEDLLRRHENFVTNVEKA 224
           F+ V    A+ A+   +L +    ++ +H      + +VYS V +  RR E F  NV   
Sbjct: 5   FALVVCTFALGALGARDLADDDWLIAARHEQWMARYGRVYSDVAEKARRLEVFKANVGFI 64

Query: 225 EDYQSEDSGTAVFGV--NKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM 282
           E   S ++G   F +  N+F D+++ + +                ++   +      ++ 
Sbjct: 65  E---SVNAGNHKFWLEANQFADITKDEFR----------------AMHKGYKMQVIGSKA 105

Query: 283 RAFQFNSLRHG-DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLT 341
           RA  F       DDLP + DWRA G ++ VK+QG+C CCWAFS V  +E +  +    L 
Sbjct: 106 RATGFRYANVSIDDLPASVDWRANGAVTPVKDQGQCGCCWAFSTVASMEGIVKVSTGKLI 165

Query: 342 ELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 399
            LS Q+LVDCD  M N GC GG MD+A ++I++NGG+ ++  YPY  ++    C   +E 
Sbjct: 166 SLSEQELVDCDVGMQNKGCGGGLMDNAFEFIVNNGGLDTEADYPYTGADGT--CNSNKES 223

Query: 400 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN-ANGLF-YYSGGVID---------- 447
                +K Y  +P  +E  ++K VA + P+S+ ++  + LF +Y GGV+           
Sbjct: 224 NIAASIKGYEDVPANDEASLQKAVAAQ-PVSIAVDGGDDLFRFYKGGVLTGACGTELDHG 282

Query: 448 ---LNQRLYGTSIPYWIVKNSWGSDWGE 472
              +   + G    YW+VKNSWG+ WGE
Sbjct: 283 VAAVGYGVAGDGTKYWLVKNSWGTSWGE 310



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  V   KL  L+ ++LVDCD  M N GC GG MD+A ++I++NGG+ ++  YPY  ++ 
Sbjct: 156 IVKVSTGKLISLSEQELVDCDVGMQNKGCGGGLMDNAFEFIVNNGGLDTEADYPYTGADG 215

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN-ANGLF-YYSGGVID 605
              C   +E      +K Y  +P  +E  ++K VA + P+S+ ++  + LF +Y GGV+ 
Sbjct: 216 T--CNSNKESNIAASIKGYEDVPANDEASLQKAVAAQ-PVSIAVDGGDDLFRFYKGGVL- 271

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                C  +  +H +  VGYG     DGT   YW+VKNSWG+ WGE
Sbjct: 272 --TGACGTE-LDHGVAAVGYG--VAGDGTK--YWLVKNSWGTSWGE 310



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 22/160 (13%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF--EVNKFFDLSD 99
             R   +M  + +VYS V +  RR E F  NV   E     ++G   F  E N+F D++ 
Sbjct: 30  AARHEQWMARYGRVYSDVAEKARRLEVFKANVGFIESV---NAGNHKFWLEANQFADITK 86

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG-DDLPEAFDWRAEG 158
            + +                ++   +      ++ RA  F       DDLP + DWRA G
Sbjct: 87  DEFR----------------AMHKGYKMQVIGSKARATGFRYANVSIDDLPASVDWRANG 130

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            ++ VK+QG+C CCWAFS V  +E +  +    L  LS Q
Sbjct: 131 AVTPVKDQGQCGCCWAFSTVASMEGIVKVSTGKLISLSEQ 170


>gi|21666724|gb|AAM73806.1|AF448505_1 cysteine proteinase [Brassica napus]
 gi|21666726|gb|AAM73807.1|AF448506_1 cysteine proteinase [Brassica napus]
          Length = 343

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 145/291 (49%), Gaps = 35/291 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG-TAVFGVNKFFDLSESDLQQL-TGLN 257
           H +VY+   +   R+  F  NVE  E       G T    VN+F DL+  + + + TG  
Sbjct: 44  HGRVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVNQFADLTNEEFRSMYTGYK 103

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            +S L           SS    T  R    +S    D LP + DWR +G ++ +K+QG C
Sbjct: 104 GNSVL-----------SSRTKPTSFRYQHVSS----DALPISVDWRKKGAVTPIKDQGSC 148

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
             CWAFSAV  +E +  I+   L  LS Q+LVDCD ++ GC GG M+ A  Y +  GG+ 
Sbjct: 149 GSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTNDDGCMGGYMNSAFNYTMTTGGLT 208

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM--NA 435
           S+  YPYK+++    C + + +     +K +  +P  +E+ + K VA   P+S+G+    
Sbjct: 209 SESNYPYKSTDGT--CNINKTKQIATSIKGFEDVPANDEKALMKAVAHH-PVSIGIAGGG 265

Query: 436 NGLFYYSGGVI--DLNQRL--------YGTS---IPYWIVKNSWGSDWGEK 473
            G  +YS GV   + +  L        YG S     YWI+KNSWG  WGE+
Sbjct: 266 TGFQFYSSGVFSGECSTHLDHGVAVVGYGKSSNGSKYWILKNSWGPKWGER 316



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD ++ GC GG M+ A  Y +  GG+ S+  YPYK+++    C + + 
Sbjct: 170 KLISLSEQELVDCDTNDDGCMGGYMNSAFNYTMTTGGLTSESNYPYKSTDGT--CNINKT 227

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM--NANGLFYYSGGVIDLNQRLCNPK 614
           +     +K +  +P  +E+ + K VA   P+S+G+     G  +YS GV       C+  
Sbjct: 228 KQIATSIKGFEDVPANDEKALMKAVAHH-PVSIGIAGGGTGFQFYSSGVFSGE---CSTH 283

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H + +VGYG    K      YWI+KNSWG  WGE+
Sbjct: 284 L-DHGVAVVGYG----KSSNGSKYWILKNSWGPKWGER 316



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 17/157 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSG-TAVFEVNKFFDLSDSDL 102
           R   +M +H +VY+   +   R+  F  NVE  E       G T    VN+F DL++ + 
Sbjct: 36  RHAAWMTEHGRVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVNQFADLTNEEF 95

Query: 103 QQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
           + + TG   +S L           SS    T  R    +S    D LP + DWR +G ++
Sbjct: 96  RSMYTGYKGNSVL-----------SSRTKPTSFRYQHVSS----DALPISVDWRKKGAVT 140

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +K+QG C  CWAFSAV  +E +  I+   L  LS Q
Sbjct: 141 PIKDQGSCGSCWAFSAVAAIEGVAQIKKGKLISLSEQ 177


>gi|357619725|gb|EHJ72184.1| hypothetical protein KGM_03271 [Danaus plexippus]
          Length = 338

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 163/301 (54%), Gaps = 39/301 (12%)

Query: 188 QGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSE 247
           +   L E  ++ ++K Y   E    R + FV N+ K  +  +E S  AV+G+NKF DLS+
Sbjct: 36  EAPTLFEQFIKDYNKEYDESEKE-ERFKIFVNNL-KDINAMNERSSNAVYGINKFSDLSK 93

Query: 248 SD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM-RAFQFNSLRHGDDLPEAFDWRAE 305
            + ++  TGL  +          ++P + +   T++  +F   +       P+ FDWR +
Sbjct: 94  EEFIKYYTGLKRE----------ESPSNEDHKKTDLPESFNVTA-------PDQFDWRKK 136

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDD 365
           GV+S +K Q  C  CWAFSA   VE++HAI+   L ++S QQL+DCD  + GC+GG   D
Sbjct: 137 GVVSSIKNQKHCGSCWAFSAAANVESIHAIKTGKLIDVSEQQLLDCDKYDSGCSGGLPWD 196

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
           AL+Y + NG  +S ++YPY A E   G    +    ++++K Y       E+++K+ +  
Sbjct: 197 ALRYFVANGA-MSLKSYPYVAKE---GKCRYDSSKVEIRLKGYKIFSKISEDQIKEHLYN 252

Query: 426 RGPLSVGMNANGLFYYSGGVI--------DLNQRL----YGT--SIPYWIVKNSWGSDWG 471
            GPLS+ ++ + +  Y GG++         +N  +    YG   S+ YWIVKNSWG +WG
Sbjct: 253 IGPLSIAIDVSPIKPYVGGIVMEECHEVCQVNHAVLLVGYGKEYSVEYWIVKNSWGPNWG 312

Query: 472 E 472
           E
Sbjct: 313 E 313



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 95/163 (58%), Gaps = 13/163 (7%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  +   KL  ++ ++L+DCD  + GC+GG   DAL+Y + NG  +S ++YPY A E   
Sbjct: 163 IHAIKTGKLIDVSEQQLLDCDKYDSGCSGGLPWDALRYFVANGA-MSLKSYPYVAKE--- 218

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
           G    +    ++++K Y       E+++K+ +   GPLS+ ++ + +  Y GG++     
Sbjct: 219 GKCRYDSSKVEIRLKGYKIFSKISEDQIKEHLYNIGPLSIAIDVSPIKPYVGGIV---ME 275

Query: 610 LCNPKAQ-NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C+   Q NHA+++VGYG+E      S+ YWIVKNSWG +WGE
Sbjct: 276 ECHEVCQVNHAVLLVGYGKE-----YSVEYWIVKNSWGPNWGE 313



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 30/194 (15%)

Query: 17  LHTF-MIKVALLES-------NIFQTRGY-LNSPVTRFLNFMRDHDKVYSSVEDLLRRHE 67
           +HT  M+ V +L S        + Q R Y L    T F  F++D++K Y   E    R +
Sbjct: 4   IHTLSMVHVLVLFSIDQCKVRELGQRRLYSLEEAPTLFEQFIKDYNKEYDESEKE-ERFK 62

Query: 68  NFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFS 126
            FV N+ K  +   E S  AV+ +NKF DLS  + ++  TGL  +          ++P +
Sbjct: 63  IFVNNL-KDINAMNERSSNAVYGINKFSDLSKEEFIKYYTGLKRE----------ESPSN 111

Query: 127 SNQTDTEM-RAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMH 185
            +   T++  +F   +       P+ FDWR +GV+S +K Q  C  CWAFSA   VE++H
Sbjct: 112 EDHKKTDLPESFNVTA-------PDQFDWRKKGVVSSIKNQKHCGSCWAFSAAANVESIH 164

Query: 186 AIQGNNLTELSVQH 199
           AI+   L ++S Q 
Sbjct: 165 AIKTGKLIDVSEQQ 178


>gi|242072392|ref|XP_002446132.1| hypothetical protein SORBIDRAFT_06g002150 [Sorghum bicolor]
 gi|241937315|gb|EES10460.1| hypothetical protein SORBIDRAFT_06g002150 [Sorghum bicolor]
          Length = 337

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 148/308 (48%), Gaps = 48/308 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + +VY    +  RR E F  NV   E + +        GVN+F DL+  + +   G    
Sbjct: 43  YGRVYKDAAEKARRFEAFKHNVAFVESFNTNKKNKFWLGVNQFADLTTEEFKANKG---- 98

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                        F           F++ +L     LP A DWR +G ++ +K QG+C C
Sbjct: 99  -------------FKPTAEKVPTTGFKYENLSV-SALPTAVDWRTKGAVTPIKNQGQCGC 144

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVV 377
           CWAFSAV  +E +  +   +L  LS Q+LVDCD    + GC GG MD A +++I NGG+ 
Sbjct: 145 CWAFSAVAAMEGIVKLSTGNLISLSEQELVDCDTHSMDEGCEGGWMDSAFEFVIKNGGLA 204

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN- 436
           ++  YPYKA + +  C  G +      +K +  +P   E  + K VA + P+SV ++A+ 
Sbjct: 205 TESNYPYKAVDGK--CKGGSKSA--ATIKGHEDVPVNNEAALMKAVANQ-PVSVAVDASD 259

Query: 437 -GLFYYSGGVI------DLNQRL----YGT---SIPYWIVKNSWGSDWGEK--------V 474
                YSGGV+      +L+  +    YG       YWI+KNSWG+ WGEK        +
Sbjct: 260 RTFMLYSGGVMTGSCGTELDHGIAAIGYGMESDGTKYWILKNSWGTTWGEKGFLRMEKDI 319

Query: 475 EDKVGSSG 482
            DK G  G
Sbjct: 320 TDKRGMCG 327



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 17/162 (10%)

Query: 498 LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ ++LVDCD    + GC GG MD A +++I NGG+ ++  YPYKA + +  C  G 
Sbjct: 165 LISLSEQELVDCDTHSMDEGCEGGWMDSAFEFVIKNGGLATESNYPYKAVDGK--CKGGS 222

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNP 613
           +      +K +  +P   E  + K VA + P+SV ++A+      YSGGV+  +   C  
Sbjct: 223 KSA--ATIKGHEDVPVNNEAALMKAVANQ-PVSVAVDASDRTFMLYSGGVMTGS---CGT 276

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           +  +H +  +GYG E   DGT   YWI+KNSWG+ WGEK  L
Sbjct: 277 E-LDHGIAAIGYGMES--DGTK--YWILKNSWGTTWGEKGFL 313



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 19/179 (10%)

Query: 21  MIKVALLESNIFQTRGYLNSP-VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           ++  A L S++   R   ++  V R  N+M ++ +VY    +  RR E F  NV   E +
Sbjct: 11  ILGCASLCSSVLAARELSDAAMVERHENWMVEYGRVYKDAAEKARRFEAFKHNVAFVESF 70

Query: 80  QREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF 139
                      VN+F DL+  + +   G                 F           F++
Sbjct: 71  NTNKKNKFWLGVNQFADLTTEEFKANKG-----------------FKPTAEKVPTTGFKY 113

Query: 140 NSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +L     LP A DWR +G ++ +K QG+C CCWAFSAV  +E +  +   NL  LS Q
Sbjct: 114 ENLSV-SALPTAVDWRTKGAVTPIKNQGQCGCCWAFSAVAAMEGIVKLSTGNLISLSEQ 171


>gi|255538788|ref|XP_002510459.1| cysteine protease, putative [Ricinus communis]
 gi|223551160|gb|EEF52646.1| cysteine protease, putative [Ricinus communis]
          Length = 422

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 153/295 (51%), Gaps = 34/295 (11%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E   + H K Y+S ED L R + F  N E  + + S+ + +    +N F DL+  + +
Sbjct: 31  LFESWTKEHGKTYTSKEDKLYRFKIFEENYEFVKKHNSQGNSSYTLSLNAFADLTHHEFK 90

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
                           + +   S+  T  ++    F       D+P + DWR +G +S+V
Sbjct: 91  ----------------ASRLGLSAFSTSGKLSRRNFPLHDFVGDVPISIDWRKKGAVSQV 134

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYI 370
           K+QG C  CW+FSA G +E ++ I   SL  LS Q+LVDCD S N GC GG MD A Q++
Sbjct: 135 KDQGNCGACWSFSATGAIEGINKIVTGSLVSLSEQELVDCDRSYNNGCEGGLMDYAYQFV 194

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           I+N G+ +++ YPY+A   E+ C   + +   V +  Y+ +P   E+E+ K VA + P+S
Sbjct: 195 IENNGIDTEEDYPYQA--REKTCNKEKLKRHVVTIDGYTDVPQNNEKELLKAVAAQ-PVS 251

Query: 431 VGMNAN--GLFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWG 471
           VG+  +      YS G+        L+  +    YG+   + YWIVKNSWG+ WG
Sbjct: 252 VGICGSERAFQLYSKGIFTGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGTHWG 306



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 94/161 (58%), Gaps = 15/161 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GC GG MD A Q++I+N G+ +++ YPY+A   E+ C
Sbjct: 158 IVTGSLVSLSEQELVDCDRSYNNGCEGGLMDYAYQFVIENNGIDTEEDYPYQA--REKTC 215

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQR 609
              + +   V +  Y+ +P   E+E+ K VA + P+SVG+  +      YS G+      
Sbjct: 216 NKEKLKRHVVTIDGYTDVPQNNEKELLKAVAAQ-PVSVGICGSERAFQLYSKGIF---TG 271

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
            C+  + +HA++IVGYG E   D     YWIVKNSWG+ WG
Sbjct: 272 PCST-SLDHAVLIVGYGSENGVD-----YWIVKNSWGTHWG 306



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 16/154 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F ++ ++H K Y+S ED L R + F  N E  + +  + + +    +N F DL+  + + 
Sbjct: 32  FESWTKEHGKTYTSKEDKLYRFKIFEENYEFVKKHNSQGNSSYTLSLNAFADLTHHEFK- 90

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                          + +   S+  T  ++    F       D+P + DWR +G +S+VK
Sbjct: 91  ---------------ASRLGLSAFSTSGKLSRRNFPLHDFVGDVPISIDWRKKGAVSQVK 135

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CW+FSA G +E ++ I   +L  LS Q
Sbjct: 136 DQGNCGACWSFSATGAIEGINKIVTGSLVSLSEQ 169


>gi|5777889|emb|CAB53515.1| cysteine protease [Solanum tuberosum]
          Length = 466

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 164/301 (54%), Gaps = 36/301 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+++ +  +R + F  N++  ++  S  + +   G+ KF DL+  + + +  L   
Sbjct: 56  HGKSYNALGEKDKRFQIFKDNLKYIDEQNSVPNQSYKLGLTKFADLTNEEYRSIY-LGTK 114

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S+ +      +   S N++D  +        + GD LPE+ DWR +GV+  VK+QG C  
Sbjct: 115 SSGD------RRKLSKNKSDRYLP-------KVGDSLPESVDWRDKGVLVGVKDQGSCGS 161

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFSAV  +E+++AI   +L  LS Q+LVDCD S N GC+GG MD A +++I+NGG+ +
Sbjct: 162 CWAFSAVAAMESINAIVTGNLISLSEQELVDCDKSYNEGCDGGLMDYAFEFVINNGGIDT 221

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG- 437
           ++ YPYK  E    C    +    VK+  Y  +P   E+ ++K VA + P+S+ + A G 
Sbjct: 222 EEDYPYK--ERNDVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQ-PVSIAIEAGGR 278

Query: 438 -LFYYSGGVID----------LNQRLYGT--SIPYWIVKNSWGSDWGEK----VEDKVGS 480
            L +Y  G+            +    YG+   + YWIV+NSWG+ WGEK    V+  V S
Sbjct: 279 DLQHYKSGIFTGKCGTAVDHGVVAAGYGSENGMDYWIVRNSWGAKWGEKGYLRVQRNVAS 338

Query: 481 S 481
           S
Sbjct: 339 S 339



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 15/169 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GC+GG MD A +++I+NGG+ +++ YPYK  E  
Sbjct: 174 INAIVTGNLISLSEQELVDCDKSYNEGCDGGLMDYAFEFVINNGGIDTEEDYPYK--ERN 231

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C    +    VK+  Y  +P   E+ ++K VA + P+S+ + A G  L +Y  G+   
Sbjct: 232 DVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQ-PVSIAIEAGGRDLQHYKSGIFTG 290

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               C   A +H ++  GYG E   D     YWIV+NSWG+ WGEK  L
Sbjct: 291 K---CG-TAVDHGVVAAGYGSENGMD-----YWIVRNSWGAKWGEKGYL 330



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 22/191 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++ +H K Y+++ +  +R + F  N++  ++     + +    + KF DL++ + + 
Sbjct: 49  YESWLIEHGKSYNALGEKDKRFQIFKDNLKYIDEQNSVPNQSYKLGLTKFADLTNEEYRS 108

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +  L   S+ +      +   S N++D  +        + GD LPE+ DWR +GV+  VK
Sbjct: 109 IY-LGTKSSGD------RRKLSKNKSDRYLP-------KVGDSLPESVDWRDKGVLVGVK 154

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH---HDKVYSSVED--LLRRHENFVT 219
           +QG C  CWAFSAV  +E+++AI   NL  LS Q     DK Y+   D  L+     FV 
Sbjct: 155 DQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDKSYNEGCDGGLMDYAFEFVI 214

Query: 220 N---VEKAEDY 227
           N   ++  EDY
Sbjct: 215 NNGGIDTEEDY 225


>gi|350538043|ref|NP_001234324.1| cysteine protease TDI-65 precursor [Solanum lycopersicum]
 gi|5726641|gb|AAD48496.1|AF172856_1 cysteine protease TDI-65 [Solanum lycopersicum]
 gi|2828252|emb|CAA05894.1| CYP1 [Solanum lycopersicum]
          Length = 466

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 164/301 (54%), Gaps = 36/301 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+++ +  +R + F  N+   ++  S  + +   G+ KF DL+  + + +  L   
Sbjct: 56  HGKSYNALGEKDKRFQIFKDNLRYIDEQNSVPNQSYKLGLTKFADLTNEEYRSIY-LGTK 114

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S+ +      +   S N++D  +        + GD LPE+ DWR +GV+  VK+QG C  
Sbjct: 115 SSGD------RKKLSKNKSDRYLP-------KVGDSLPESIDWREKGVLVGVKDQGSCGS 161

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFSAV  +E+++AI   +L  LS Q+LVDCD S N GC+GG MD A +++I NGG+ +
Sbjct: 162 CWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDT 221

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG- 437
           ++ YPYK  E    C    +    VK+  Y  +P   E+ ++K VA + P+S+ + A G 
Sbjct: 222 EEDYPYK--ERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQ-PVSIALEAGGR 278

Query: 438 -LFYYSGGV--------IDLNQRL--YGT--SIPYWIVKNSWGSDWGE----KVEDKVGS 480
              +Y  G+        +D    +  YGT   + YWIV+NSWG++WGE    +V+  V S
Sbjct: 279 DFQHYKSGIFTGKCGTAVDHGVVIAGYGTENGMDYWIVRNSWGANWGENGYLRVQRNVAS 338

Query: 481 S 481
           S
Sbjct: 339 S 339



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 15/169 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GC+GG MD A +++I NGG+ +++ YPYK  E  
Sbjct: 174 INAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYK--ERN 231

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C    +    VK+  Y  +P   E+ ++K VA + P+S+ + A G    +Y  G+   
Sbjct: 232 GVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQ-PVSIALEAGGRDFQHYKSGIFTG 290

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               C   A +H ++I GYG E   D     YWIV+NSWG++WGE   L
Sbjct: 291 K---CG-TAVDHGVVIAGYGTENGMD-----YWIVRNSWGANWGENGYL 330



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 14/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++ +H K Y+++ +  +R + F  N+   ++     + +    + KF DL++ + + 
Sbjct: 49  YESWLIEHGKSYNALGEKDKRFQIFKDNLRYIDEQNSVPNQSYKLGLTKFADLTNEEYRS 108

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +  L   S+ +      +   S N++D  +        + GD LPE+ DWR +GV+  VK
Sbjct: 109 IY-LGTKSSGD------RKKLSKNKSDRYLP-------KVGDSLPESIDWREKGVLVGVK 154

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAV  +E+++AI   NL  LS Q
Sbjct: 155 DQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQ 188


>gi|168018894|ref|XP_001761980.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686697|gb|EDQ73084.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/331 (35%), Positives = 156/331 (47%), Gaps = 57/331 (17%)

Query: 174 AFSAVGVVEAMHAIQG-NNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS 232
           A S   V +  HA+ G     E  ++   KVY SVE+   R   F +N+ KA  +Q+ D 
Sbjct: 36  ALSNGSVEQFAHALIGAEKRFESFMKDFGKVYHSVEEYEHRFGVFKSNLLKALKHQALDP 95

Query: 233 GTAVFGVNKFFDLSESDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 291
            TA  GV  F DL+E +   +  GL   S L     + QAP       TE          
Sbjct: 96  -TASHGVTMFSDLTEEEFTSKYLGLKRPSVLSS---APQAP----PLPTE---------- 137

Query: 292 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC 351
              DLP  FDWR +G +  VK+QG C  CWAFS  G VE  H +    L  LS QQLVDC
Sbjct: 138 ---DLPPNFDWREKGAVGPVKDQGGCGSCWAFSTTGAVEGAHFLNSGKLVSLSEQQLVDC 194

Query: 352 ---------DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 402
                    D  + GCNGG M +A QY+   GG+  +  YPY   E   G    +     
Sbjct: 195 DHQCDREEADACDAGCNGGFMTNAYQYVEAAGGLELESDYPY---EGRDGKCKFDSNKVA 251

Query: 403 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQR-------L 452
           VKV  ++ IP  +E+++  ++   GPL++G+NA  +  Y  GV   I  N+R       L
Sbjct: 252 VKVSNFTNIPV-DEDQVAAYLIKSGPLAIGINAEFMQTYIAGVSCPIFCNKRNLDHGVLL 310

Query: 453 YGTS-----------IPYWIVKNSWGSDWGE 472
            G +            PYWI+KNSWG +WG+
Sbjct: 311 VGYAERGFAPARLAYKPYWIIKNSWGPNWGD 341



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 17/166 (10%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GCNGG M +A QY+   GG+  +  YPY   E 
Sbjct: 182 KLVSLSEQQLVDCDHQCDREEADACDAGCNGGFMTNAYQYVEAAGGLELESDYPY---EG 238

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    +     VKV  ++ IP  +E+++  ++   GPL++G+NA  +  Y  GV    
Sbjct: 239 RDGKCKFDSNKVAVKVSNFTNIPV-DEDQVAAYLIKSGPLAIGINAEFMQTYIAGVS--C 295

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDG--TSIPYWIVKNSWGSDWGE 651
              CN +  +H +++VGY E           PYWI+KNSWG +WG+
Sbjct: 296 PIFCNKRNLDHGVLLVGYAERGFAPARLAYKPYWIIKNSWGPNWGD 341



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 74/157 (47%), Gaps = 22/157 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL- 102
           RF +FM+D  KVY SVE+   R   F +N+ KA  +Q  D  TA   V  F DL++ +  
Sbjct: 55  RFESFMKDFGKVYHSVEEYEHRFGVFKSNLLKALKHQALDP-TASHGVTMFSDLTEEEFT 113

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            +  GL   S L     + QAP       TE             DLP  FDWR +G +  
Sbjct: 114 SKYLGLKRPSVLSS---APQAP----PLPTE-------------DLPPNFDWREKGAVGP 153

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK+QG C  CWAFS  G VE  H +    L  LS Q 
Sbjct: 154 VKDQGGCGSCWAFSTTGAVEGAHFLNSGKLVSLSEQQ 190


>gi|321460289|gb|EFX71333.1| hypothetical protein DAPPUDRAFT_189155 [Daphnia pulex]
          Length = 266

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/264 (37%), Positives = 138/264 (52%), Gaps = 46/264 (17%)

Query: 233 GTAVFGVNKFFDLSESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 291
           GTAV+G   F D S ++ +  L G N         PSL+      Q++  +R      + 
Sbjct: 2   GTAVYGDTPFSDWSAAEYKAHLAGFN---------PSLR------QSNARLRQAAIPEI- 45

Query: 292 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC 351
              DLP+ FDWR   V++ VK+QG C  CWAFS  G VE ++A++   L  LS Q+LVDC
Sbjct: 46  ---DLPDEFDWRNHSVVTPVKDQGSCGSCWAFSVTGNVEGIYAVRNGDLLSLSEQELVDC 102

Query: 352 DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI 411
           D  + GCNGG  ++A + I D GG+ ++  YPY   E++  C        +V+V     I
Sbjct: 103 DKLDSGCNGGLPENAYKAIHDIGGLETESDYPYNGHENK--CKFNSNI-TRVQVTGGVEI 159

Query: 412 PYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV------------IDLNQRL--YGTS- 456
               E EM +W+   GP+S+G+NAN + YY GGV            ID    +  YG S 
Sbjct: 160 ST-NETEMAQWLIQNGPISIGINANAMQYYRGGVSHPWKVLCRPGGIDHGVLIVGYGVSQ 218

Query: 457 -------IPYWIVKNSWGSDWGEK 473
                  +PYWIVKNSWG+ WGE+
Sbjct: 219 YPKFNKTLPYWIVKNSWGTRWGEQ 242



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 93/156 (59%), Gaps = 5/156 (3%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  + GCNGG  ++A + I D GG+ ++  YPY   E++  C      
Sbjct: 91  LLSLSEQELVDCDKLDSGCNGGLPENAYKAIHDIGGLETESDYPYNGHENK--CKFNSNI 148

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
             +V+V     I    E EM +W+   GP+S+G+NAN + YY GGV    + LC P   +
Sbjct: 149 -TRVQVTGGVEIST-NETEMAQWLIQNGPISIGINANAMQYYRGGVSHPWKVLCRPGGID 206

Query: 618 HALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
           H ++IVGYG  +  K   ++PYWIVKNSWG+ WGE+
Sbjct: 207 HGVLIVGYGVSQYPKFNKTLPYWIVKNSWGTRWGEQ 242



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 20/115 (17%)

Query: 85  GTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 143
           GTAV+    F D S ++ +  L G N         PSL+      Q++  +R      + 
Sbjct: 2   GTAVYGDTPFSDWSAAEYKAHLAGFN---------PSLR------QSNARLRQAAIPEI- 45

Query: 144 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
              DLP+ FDWR   V++ VK+QG C  CWAFS  G VE ++A++  +L  LS Q
Sbjct: 46  ---DLPDEFDWRNHSVVTPVKDQGSCGSCWAFSVTGNVEGIYAVRNGDLLSLSEQ 97


>gi|171702829|dbj|BAG16370.1| cysteine protease [Brassica oleracea var. italica]
          Length = 332

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 145/291 (49%), Gaps = 35/291 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG-TAVFGVNKFFDLSESDLQQL-TGLN 257
           H +VY+   +   R+  F  NVE  E       G T    VN+F DL+  + + + TG  
Sbjct: 38  HGRVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVNQFADLTNEEFRSMYTGYK 97

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            +S L           SS    T  R    +S    D LP + DWR +G ++ +K+QG C
Sbjct: 98  GNSVL-----------SSRTKPTSFRYQHVSS----DALPISVDWRKKGAVTPIKDQGSC 142

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
             CWAFSAV  +E +  I+   L  LS Q+LVDCD ++ GC GG M+ A  Y +  GG+ 
Sbjct: 143 GSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTNDDGCMGGYMNSAFNYTMTTGGLT 202

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM--NA 435
           S+  YPYK+++    C + + +     +K +  +P  +E+ + K VA   P+S+G+    
Sbjct: 203 SESNYPYKSTDGT--CNINKTKQIATSIKGFEDVPANDEKALMKAVAHH-PVSIGIAGGG 259

Query: 436 NGLFYYSGGVI--DLNQRL--------YGTS---IPYWIVKNSWGSDWGEK 473
            G  +YS GV   + +  L        YG S     YWI+KNSWG  WGE+
Sbjct: 260 TGFQFYSSGVFSGECSTHLDHGVAVVGYGKSSNGSKYWILKNSWGPKWGER 310



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD ++ GC GG M+ A  Y +  GG+ S+  YPYK+++    C + + 
Sbjct: 164 KLISLSEQELVDCDTNDDGCMGGYMNSAFNYTMTTGGLTSESNYPYKSTDGT--CNINKT 221

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM--NANGLFYYSGGVIDLNQRLCNPK 614
           +     +K +  +P  +E+ + K VA   P+S+G+     G  +YS GV       C+  
Sbjct: 222 KQIATSIKGFEDVPANDEKALMKAVAHH-PVSIGIAGGGTGFQFYSSGVFSGE---CSTH 277

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H + +VGYG    K      YWI+KNSWG  WGE+
Sbjct: 278 L-DHGVAVVGYG----KSSNGSKYWILKNSWGPKWGER 310



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 17/157 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSG-TAVFEVNKFFDLSDSDL 102
           R   +M +H +VY+   +   R+  F  NVE  E       G T    VN+F DL++ + 
Sbjct: 30  RHAAWMTEHGRVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVNQFADLTNEEF 89

Query: 103 QQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
           + + TG   +S L           SS    T  R    +S    D LP + DWR +G ++
Sbjct: 90  RSMYTGYKGNSVL-----------SSRTKPTSFRYQHVSS----DALPISVDWRKKGAVT 134

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +K+QG C  CWAFSAV  +E +  I+   L  LS Q
Sbjct: 135 PIKDQGSCGSCWAFSAVAAIEGVAQIKKGKLISLSEQ 171


>gi|357619727|gb|EHJ72186.1| cathepsin [Danaus plexippus]
          Length = 336

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 157/296 (53%), Gaps = 39/296 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  ++ ++K Y S E    R + FV N+++  D   + S  AV G+NKF DLS+ + +
Sbjct: 40  LFENFIREYNKKYDSKEKE-ERFKIFVNNLKRINDLNHK-STNAVHGINKFTDLSKEEFK 97

Query: 252 QL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +  TG   D +  D      +  S N T                  P AFDWR +GV+++
Sbjct: 98  KFYTGFKPDKSFLDDNIKKPSQLSFNIT-----------------APPAFDWRDKGVVTR 140

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYI 370
           VK QG C  CWAFS +G VE+++AI+  +L ELS QQLVDCD  +  C+ G  D+A QY+
Sbjct: 141 VKNQGTCGSCWAFSTIGNVESVNAIKHGNLVELSEQQLVDCDSKDEACDSGLPDNAQQYL 200

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           + +G  +S+Q+YPYK   +   C     +   V++  + ++   E +  +K  +T  PLS
Sbjct: 201 VSHGA-ISEQSYPYKGYAA--NCTYDSSQ-VVVRLSNFEKVVLSECQMAEKLYST-APLS 255

Query: 431 VGMNANGLFYYSGGVI--------DLNQRL----YGTS--IPYWIVKNSWGSDWGE 472
           + + A  L  Y+ G++        DLN  +    YG      +WI+KNSWG++WGE
Sbjct: 256 IVIAAEVLGTYTKGILVNECEQSQDLNHAVLLVGYGNEGGTNFWILKNSWGTNWGE 311



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 20/156 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F NF+R+++K Y S E    R + FV N+++  D   + S  AV  +NKF DLS  + ++
Sbjct: 41  FENFIREYNKKYDSKEKE-ERFKIFVNNLKRINDLNHK-STNAVHGINKFTDLSKEEFKK 98

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             TG   D +  D      +  S N T                  P AFDWR +GV+++V
Sbjct: 99  FYTGFKPDKSFLDDNIKKPSQLSFNIT-----------------APPAFDWRDKGVVTRV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CWAFS +G VE+++AI+  NL ELS Q 
Sbjct: 142 KNQGTCGSCWAFSTIGNVESVNAIKHGNLVELSEQQ 177



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 88/154 (57%), Gaps = 12/154 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  +  C+ G  D+A QY++ +G  +S+Q+YPYK   +   C     +
Sbjct: 170 LVELSEQQLVDCDSKDEACDSGLPDNAQQYLVSHGA-ISEQSYPYKGYAA--NCTYDSSQ 226

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
              V++  + ++   E +  +K  +T  PLS+ + A  L  Y+ G+  L       +  N
Sbjct: 227 -VVVRLSNFEKVVLSECQMAEKLYST-APLSIVIAAEVLGTYTKGI--LVNECEQSQDLN 282

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           HA+++VGYG E    GT+  +WI+KNSWG++WGE
Sbjct: 283 HAVLLVGYGNE---GGTN--FWILKNSWGTNWGE 311


>gi|255568299|ref|XP_002525124.1| cysteine protease, putative [Ricinus communis]
 gi|223535583|gb|EEF37251.1| cysteine protease, putative [Ricinus communis]
          Length = 342

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 150/291 (51%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H KVY   E+ LRR + F  NVE  E   +  + + + G+N+F DL+  + +        
Sbjct: 46  HGKVYKDDEEKLRRFQIFKNNVEFIESSNAAGNNSYMLGINRFADLTNEEFRASWN---- 101

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                     + P  +++  T    F++ ++     LP + DWR +G ++ +K+Q +C  
Sbjct: 102 --------GYKRPLDASRIVT---PFKYENV---TALPYSMDWRRKGAVTSIKDQRECGS 147

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVV 377
           CWAFSAV   E +H ++   L  LS Q+LVDCD+   + GC GG M+DA ++I  NGG+ 
Sbjct: 148 CWAFSAVAATEGVHKLRTGKLVSLSEQELVDCDVKGEDKGCQGGLMEDAFKFIKRNGGIT 207

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++  Y Y+  + +  C   +E     K+  Y  +P   E  + K VA + P+SV ++A  
Sbjct: 208 TEANYAYRGRDGK--CDTKKEASHVAKITGYQVVPENSEAALLKAVAHQ-PVSVSIDAGS 264

Query: 438 L---FYYSGGVI-----DLNQRL----YGTSIP---YWIVKNSWGSDWGEK 473
           +   FY SG        DLN  +    YGTS     YWIVKNSWG +WGE+
Sbjct: 265 MSFQFYQSGIYAGSCGSDLNHGVAAVGYGTSSSGSKYWIVKNSWGPEWGER 315



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 17/161 (10%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG M+DA ++I  NGG+ ++  Y Y+  + +  C   
Sbjct: 167 KLVSLSEQELVDCDVKGEDKGCQGGLMEDAFKFIKRNGGITTEANYAYRGRDGK--CDTK 224

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLNQRLC 611
           +E     K+  Y  +P   E  + K VA + P+SV ++A  +   FY SG    +    C
Sbjct: 225 KEASHVAKITGYQVVPENSEAALLKAVAHQ-PVSVSIDAGSMSFQFYQSG----IYAGSC 279

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +  VGYG       +   YWIVKNSWG +WGE+
Sbjct: 280 GSDL-NHGVAAVGYGTSS----SGSKYWIVKNSWGPEWGER 315



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 18/160 (11%)

Query: 39  NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLS 98
           ++ V R   +M  H KVY   E+ LRR + F  NVE  E      + + +  +N+F DL+
Sbjct: 33  STMVERHEKWMAKHGKVYKDDEEKLRRFQIFKNNVEFIESSNAAGNNSYMLGINRFADLT 92

Query: 99  DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 158
           + + +                  + P  +++  T    F++ ++     LP + DWR +G
Sbjct: 93  NEEFRASWN------------GYKRPLDASRIVT---PFKYENV---TALPYSMDWRRKG 134

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            ++ +K+Q +C  CWAFSAV   E +H ++   L  LS Q
Sbjct: 135 AVTSIKDQRECGSCWAFSAVAATEGVHKLRTGKLVSLSEQ 174


>gi|641905|gb|AAC49406.1| cysteine proteinase [Zinnia violacea]
          Length = 342

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 157/298 (52%), Gaps = 36/298 (12%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           +L E S+  H K+Y S ++ L R E F+ N++  ++   + S   + G+N+F DL+  + 
Sbjct: 47  HLFESSLVKHSKIYESFDEKLHRFEIFMDNLKHIDETNKKVSNYWL-GLNEFADLTHEEF 105

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +    L     L            + + D  +  F++   R   DLP++ DWR +G +S 
Sbjct: 106 KN-KFLGFKGEL------------AERKDESIEQFRY---RDFVDLPKSVDWRKKGAVSP 149

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG+C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  Y
Sbjct: 150 VKNQGQCGSCWAFSTVAAVEGINQIVTGNLTVLSEQELIDCDTTFNNGCNGGLMDYAFAY 209

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           +  N G+  ++ YPY  SE    C    +   KV +  Y  +P   E+   K +A + P+
Sbjct: 210 VTRN-GLHKEEEYPYIMSEGT--CDEKRDASEKVTISGYHDVPRNNEDSFLKALANQ-PI 265

Query: 430 SVGMNANG--LFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV D      L+  +    YGTS  + Y IV+NSWG  WGEK
Sbjct: 266 SVAIEASGRDFQFYSGGVFDGHCGTELDHGVAAVGYGTSKGLDYVIVRNSWGPKWGEK 323



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 88/163 (53%), Gaps = 16/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  Y+  N G+  ++ YPY  SE    C
Sbjct: 174 IVTGNLTVLSEQELIDCDTTFNNGCNGGLMDYAFAYVTRN-GLHKEEEYPYIMSEGT--C 230

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
               +   KV +  Y  +P   E+   K +A + P+SV + A+G    +YSGGV D +  
Sbjct: 231 DEKRDASEKVTISGYHDVPRNNEDSFLKALANQ-PISVAIEASGRDFQFYSGGVFDGH-- 287

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG  +  D     Y IV+NSWG  WGEK
Sbjct: 288 -CGTEL-DHGVAAVGYGTSKGLD-----YVIVRNSWGPKWGEK 323



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 17/161 (10%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           ++  +  F + +  H K+Y S ++ L R E F+ N++  ++  ++ S   +  +N+F DL
Sbjct: 42  IHKVIHLFESSLVKHSKIYESFDEKLHRFEIFMDNLKHIDETNKKVSNYWL-GLNEFADL 100

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           +  + +    L     L            + + D  +  F++   R   DLP++ DWR +
Sbjct: 101 THEEFKN-KFLGFKGEL------------AERKDESIEQFRY---RDFVDLPKSVDWRKK 144

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G +S VK QG+C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 145 GAVSPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTVLSEQ 185


>gi|226507950|ref|NP_001151278.1| LOC100284911 precursor [Zea mays]
 gi|195645488|gb|ACG42212.1| vignain precursor [Zea mays]
          Length = 376

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 148/281 (52%), Gaps = 32/281 (11%)

Query: 209 DLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPS 268
           D  RR   F  NV    ++   D    +  +N+F D++  + ++    +  +     +  
Sbjct: 64  DKARRFNVFKANVRLIHEFNRRDEPYKLR-LNRFGDMTADEFRRHYAGSRVAHHRMFRGD 122

Query: 269 LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGV 328
            Q   +S        +F +   R   D+P + DWR +G ++ VK+QG+C  CWAFS +  
Sbjct: 123 RQGSSASA-------SFMYADAR---DVPASVDWRQKGAVTDVKDQGQCGSCWAFSTIAA 172

Query: 329 VEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKAS 387
           VE ++AI+  +LT LS QQLVDCD  +N GCNGG MD A QYI  +GGV ++ AYPY+A 
Sbjct: 173 VEGINAIKTKNLTSLSEQQLVDCDTKANAGCNGGLMDYAFQYIAKHGGVAAEDAYPYRAR 232

Query: 388 ESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV 445
           ++       +     V +  Y  +P  +E  +KK VA + P+SV + A+G    +YS GV
Sbjct: 233 QAS----CKKSPAPVVTIDGYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGV 287

Query: 446 I------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
                  +L+  +    YG +     YW+VKNSWG +WGEK
Sbjct: 288 FSGRCGTELDHGVTAVGYGVTADGTKYWLVKNSWGPEWGEK 328



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +    L+ L+ ++LVDCD  +N GCNGG MD A QYI  +GGV ++ AYPY+A ++ 
Sbjct: 176 INAIKTKNLTSLSEQQLVDCDTKANAGCNGGLMDYAFQYIAKHGGVAAEDAYPYRARQAS 235

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
                 +     V +  Y  +P  +E  +KK VA + P+SV + A+G    +YS GV   
Sbjct: 236 ----CKKSPAPVVTIDGYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGVFSG 290

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  +  +H +  VGYG     DGT   YW+VKNSWG +WGEK
Sbjct: 291 R---CGTEL-DHGVTAVGYG--VTADGTK--YWLVKNSWGPEWGEK 328



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 11/138 (7%)

Query: 61  DLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPS 120
           D  RR   F  NV    ++ R D    +  +N+F D++  + ++    +  +     +  
Sbjct: 64  DKARRFNVFKANVRLIHEFNRRDEPYKL-RLNRFGDMTADEFRRHYAGSRVAHHRMFRGD 122

Query: 121 LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGV 180
            Q   +S        +F +   R   D+P + DWR +G ++ VK+QG+C  CWAFS +  
Sbjct: 123 RQGSSASA-------SFMYADAR---DVPASVDWRQKGAVTDVKDQGQCGSCWAFSTIAA 172

Query: 181 VEAMHAIQGNNLTELSVQ 198
           VE ++AI+  NLT LS Q
Sbjct: 173 VEGINAIKTKNLTSLSEQ 190


>gi|71084302|gb|AAZ23596.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 166/342 (48%), Gaps = 46/342 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFS VG +E+  A+ G+ LT LS QQLV CD  + GC GG M  A ++++   NG + 
Sbjct: 150 CWAFSVVGNIESQWAVAGHRLTALSEQQLVSCDDMDSGCGGGLMTQAFEWLLRNMNGTMF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY ++      C    +     ++  Y  I    E  M  W+A  GP+S+G++A+
Sbjct: 210 TEDSYPYVSTFGYVPECTNSSQLVPGARIDGYVMIE-SNETVMAAWLAKSGPISIGVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y GGV+       LN  +    Y  +  +PYW++KNSWG +WGEK  V   +G + 
Sbjct: 269 SFMSYHGGVLTSCAGKQLNHGVLLVGYNMTGEVPYWVIKNSWGENWGEKGYVRVTMGVNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM 511
               +  ++  +P  L+             R+  E+++  DM
Sbjct: 329 CLLTEYPVSAHVPQSLAPGPSTDSEKSAPKRVMVEQVICTDM 370



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L+ L+ ++LV CD  + GC GG M  A ++++ N  G + ++ +YPY ++      C  
Sbjct: 169 RLTALSEQQLVSCDDMDSGCGGGLMTQAFEWLLRNMNGTMFTEDSYPYVSTFGYVPECTN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             +     ++  Y  I    E  M  W+A  GP+S+G++A+    Y GGV+      C  
Sbjct: 229 SSQLVPGARIDGYVMIE-SNETVMAAWLAKSGPISIGVDASSFMSYHGGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           K  NH +++VGY    +     +PYW++KNSWG +WGEK
Sbjct: 284 KQLNHGVLLVGYNMTGE-----VPYWVIKNSWGENWGEK 317



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK QG C  CWAFS VG +E+  A+ G+ LT LS Q 
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSVVGNIESQWAVAGHRLTALSEQQ 177


>gi|291230041|ref|XP_002734978.1| PREDICTED: cysteine proteinase inhibitor-like [Saccoglossus
           kowalevskii]
          Length = 352

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 147/293 (50%), Gaps = 42/293 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ +DK Y + E+   R++ F  N+ KAE  Q  +  T  +GV KF DLSE + ++    
Sbjct: 58  MKTYDKKYDTEEEHQLRYQIFQDNLLKAERLQQTEQATGQYGVTKFMDLSEEEFRKYY-- 115

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA--EGVISKVKEQ 314
                   + P  +       +D  M+  +          P AFDWR   +  ++KVK Q
Sbjct: 116 --------LTPVWRG------SDPHMKKAEIPK----GTPPAAFDWRDADKNAVTKVKNQ 157

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNG 374
           G C  CWAFS  G +E    I+  +L  LS Q+LVDCD  + GCNGG   +A Q I+  G
Sbjct: 158 GTCGSCWAFSTTGNIEGQWKIKKGTLVSLSEQELVDCDKLDQGCNGGLPSNAYQEIMRFG 217

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G++S+  YPY   + +  C +      KV +     I   +E +M  W+A  GP+S+G+N
Sbjct: 218 GIMSEDDYPYTGRDQD--CKLNATLN-KVYINGSMNIS-KDEGDMASWLAANGPISIGIN 273

Query: 435 ANGLFYYSGGVI----------DLNQRL----YGTS--IPYWIVKNSWGSDWG 471
           AN + +Y GGV           +L+  +    YGT    PYWI+KNSWG  WG
Sbjct: 274 ANAMQFYFGGVSHPWKIFCNPENLDHGVLIVGYGTKDGTPYWIIKNSWGRSWG 326



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 91/153 (59%), Gaps = 9/153 (5%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  + GCNGG   +A Q I+  GG++S+  YPY   + +  C +    
Sbjct: 183 LVSLSEQELVDCDKLDQGCNGGLPSNAYQEIMRFGGIMSEDDYPYTGRDQD--CKLNATL 240

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
             KV +     I   +E +M  W+A  GP+S+G+NAN + +Y GGV    +  CNP+  +
Sbjct: 241 N-KVYINGSMNIS-KDEGDMASWLAANGPISIGINANAMQFYFGGVSHPWKIFCNPENLD 298

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
           H ++IVGYG    KDGT  PYWI+KNSWG  WG
Sbjct: 299 HGVLIVGYG---TKDGT--PYWIIKNSWGRSWG 326



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 24/196 (12%)

Query: 7   VSLGEKGLGYLHTFMIKVALLESNIFQTR--GYLNSPVTRFLNFMRDHDKVYSSVEDLLR 64
           V+LG + +G     +  V +++     T   G ++     F +FM+ +DK Y + E+   
Sbjct: 14  VALGSQAIGPRTITINNVPMIDEIERNTNESGSVDKTQDLFQDFMKTYDKKYDTEEEHQL 73

Query: 65  RHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAP 124
           R++ F  N+ KAE  Q+ +  T  + V KF DLS+ + ++            + P  +  
Sbjct: 74  RYQIFQDNLLKAERLQQTEQATGQYGVTKFMDLSEEEFRKYY----------LTPVWRG- 122

Query: 125 FSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA--EGVISKVKEQGKCACCWAFSAVGVVE 182
                +D  M+  +          P AFDWR   +  ++KVK QG C  CWAFS  G +E
Sbjct: 123 -----SDPHMKKAEIPK----GTPPAAFDWRDADKNAVTKVKNQGTCGSCWAFSTTGNIE 173

Query: 183 AMHAIQGNNLTELSVQ 198
               I+   L  LS Q
Sbjct: 174 GQWKIKKGTLVSLSEQ 189


>gi|310656789|gb|ADP02218.1| Peptidase_C1 domain-containing protein [Triticum aestivum]
          Length = 341

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 156/310 (50%), Gaps = 51/310 (16%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLT---GLN 257
           ++VY    +  +R E F  NV   E + +E+      GVN+F DL+  + +      GL 
Sbjct: 45  NRVYKDGTEKAQRFEVFKANVAFIESFNAENR-KFWLGVNQFTDLTNDEFRATKTNKGLK 103

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
           +           +AP            F+++++   D LP A DWR +GV++ +K+QG+C
Sbjct: 104 MSGG--------RAP----------TGFKYSNVSI-DALPTAVDWRTKGVVTPIKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGG 375
            CCWAFSAV   E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II NGG
Sbjct: 145 GCCWAFSAVVATEGIVKLSTGKLISLSEQELVDCDVHGVDQGCEGGEMDDAFKFIIKNGG 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPY A + +  C           +K Y  +P  +E  + K VA + P+SV ++ 
Sbjct: 205 LTTEANYPYTAQDGQ--CKTSIASNSVATIKGYEDVPANDESSLMKAVANQ-PVSVAVDG 261

Query: 436 NGLFY--YSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK------- 473
             + +  YSGGV+      DL+  +    YG +     YW++KNSWG+ WGE        
Sbjct: 262 GDVIFQHYSGGVMTGSCGTDLDHGIAAIGYGMTSDGTKYWLLKNSWGTTWGESGYLRMEK 321

Query: 474 -VEDKVGSSG 482
            + DK G  G
Sbjct: 322 DISDKSGMCG 331



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 15/159 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+ ++  YPY A + +  C   
Sbjct: 166 KLISLSEQELVDCDVHGVDQGCEGGEMDDAFKFIIKNGGLTTEANYPYTAQDGQ--CKTS 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
                   +K Y  +P  +E  + K VA + P+SV ++   + +  YSGGV+  +   C 
Sbjct: 224 IASNSVATIKGYEDVPANDESSLMKAVANQ-PVSVAVDGGDVIFQHYSGGVMTGS---CG 279

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               +H +  +GYG     DGT   YW++KNSWG+ WGE
Sbjct: 280 TDL-DHGIAAIGYGMTS--DGTK--YWLLKNSWGTTWGE 313



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 24/179 (13%)

Query: 24  VALLESNIFQTRGYLNSP-VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE 82
           + L  S +   R   ++  V R   +M   ++VY    +  +R E F  NV   E +  E
Sbjct: 15  ICLCSSAVLSARELGDTAMVERHEQWMAKFNRVYKDGTEKAQRFEVFKANVAFIESFNAE 74

Query: 83  DSGTAVFEVNKFFDLSDSDLQQLT---GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF 139
           +       VN+F DL++ + +      GL +           +AP            F++
Sbjct: 75  NR-KFWLGVNQFTDLTNDEFRATKTNKGLKMSGG--------RAP----------TGFKY 115

Query: 140 NSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +++   D LP A DWR +GV++ +K+QG+C CCWAFSAV   E +  +    L  LS Q
Sbjct: 116 SNVSI-DALPTAVDWRTKGVVTPIKDQGQCGCCWAFSAVVATEGIVKLSTGKLISLSEQ 173


>gi|393717301|gb|AFN21222.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 166/338 (49%), Gaps = 47/338 (13%)

Query: 177 AVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           AV    A   ++  N  E  V   +K YSS  + LRR + F  N+ +  +    DS  A 
Sbjct: 12  AVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRH 292
           + +NKF DLS+ + + + TGL+L +  ++    +   Q P                    
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG----------------- 112

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
               P  FDWR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS QQ++DCD
Sbjct: 113 ----PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD 168

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A + II  GGV  +  YPY+A  +   C +   + F V+VK+  R  
Sbjct: 169 FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNSNK-FLVQVKDCYRYI 225

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYW 460
              EE++K  +   GP+ + ++A  +  Y  G+I       LN  +    YG   ++PYW
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIKYCFDSGLNHAVLLVGYGVENNVPYW 285

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +V+  + + G R  +L  T V+
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRN-ELASTAVI 322



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 89/156 (57%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A + II  GGV  +  YPY+A  +   C +  
Sbjct: 154 NELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNS 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  G+I    + C    
Sbjct: 212 NK-FLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII----KYCFDSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      ++PYW  KN+WG+DWGE
Sbjct: 267 LNHAVLLVGYGVE-----NNVPYWTFKNTWGTDWGE 297



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 28/166 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P   F  F+   +K YSS  + LRR + F  N+ +  +  + DS  A +E+NKF DL
Sbjct: 22  LKAP-NYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AKYEINKFSDL 78

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 153
           S D  + + TGL+L +  ++    +   Q P                        P  FD
Sbjct: 79  SKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG---------------------PLEFD 117

Query: 154 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           WR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS Q 
Sbjct: 118 WRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQ 163


>gi|226508570|ref|NP_001141984.1| uncharacterized protein LOC100274134 precursor [Zea mays]
 gi|194706676|gb|ACF87422.1| unknown [Zea mays]
 gi|413920745|gb|AFW60677.1| vignain [Zea mays]
          Length = 363

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 157/312 (50%), Gaps = 41/312 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TG 255
           +  + + Y    +   R + F  N E  +   +      V G N+F DL+  +   + TG
Sbjct: 63  MAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAGGKKKYVLGTNQFADLTSKEFAAMYTG 122

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L   + +         P  + Q       +Q N  R  DD+    DWR +G ++ VK QG
Sbjct: 123 LRKPAAV---------PSGAKQIPAAGSKYQ-NFTRLDDDV--QVDWRQQGAVTPVKNQG 170

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDN 373
           +C CCWAFSAVG +E +  I   +L  LS QQ++DCD S+G  GCNGG MD+A QY+I+N
Sbjct: 171 QCGCCWAFSAVGAMEGLIMITTGNLVSLSEQQILDCDESDGNQGCNGGYMDNAFQYVINN 230

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GGV ++ AYPY A +    C   +       +  +  +P G+E  +   VA + P+SVG+
Sbjct: 231 GGVTTEDAYPYSAVQGT--C---QNVQPAATISGFQDLPSGDENALANAVANQ-PVSVGV 284

Query: 434 N--ANGLFYYSGGV-------IDLNQRL----YGT---SIPYWIVKNSWGSDWGE----K 473
           +  ++   +Y GG+        D+N  +    YG       YWI+KNSWG+ WGE    +
Sbjct: 285 DGGSSPFQFYQGGIYDGDGCGTDMNHAVTAIGYGADDQGTQYWILKNSWGTGWGENGFMQ 344

Query: 474 VEDKVGSSGNRT 485
           ++  VG+ G  T
Sbjct: 345 LQMGVGACGIST 356



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 97/166 (58%), Gaps = 17/166 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           L  +    L  L+ ++++DCD S+G  GCNGG MD+A QY+I+NGGV ++ AYPY A + 
Sbjct: 187 LIMITTGNLVSLSEQQILDCDESDGNQGCNGGYMDNAFQYVINNGGVTTEDAYPYSAVQG 246

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN--ANGLFYYSGGVID 605
              C   +       +  +  +P G+E  +   VA + P+SVG++  ++   +Y GG+ D
Sbjct: 247 T--C---QNVQPAATISGFQDLPSGDENALANAVANQ-PVSVGVDGGSSPFQFYQGGIYD 300

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +   C     NHA+  +GYG +++  GT   YWI+KNSWG+ WGE
Sbjct: 301 GDG--CGTD-MNHAVTAIGYGADDQ--GTQ--YWILKNSWGTGWGE 339



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 13/159 (8%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           + R+  +M  + + Y    +   R + F  N E  +          V   N+F DL+  +
Sbjct: 56  MARYKKWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAGGKKKYVLGTNQFADLTSKE 115

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
              + TGL   + +         P  + Q       +Q N  R  DD+    DWR +G +
Sbjct: 116 FAAMYTGLRKPAAV---------PSGAKQIPAAGSKYQ-NFTRLDDDV--QVDWRQQGAV 163

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + VK QG+C CCWAFSAVG +E +  I   NL  LS Q 
Sbjct: 164 TPVKNQGQCGCCWAFSAVGAMEGLIMITTGNLVSLSEQQ 202


>gi|359491865|ref|XP_002273243.2| PREDICTED: xylem cysteine proteinase 1-like [Vitis vinifera]
          Length = 351

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/300 (36%), Positives = 152/300 (50%), Gaps = 38/300 (12%)

Query: 190 NNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD 249
            +L E  +  H K Y S E+ L R E F  N+ K  D  ++   +   G+N+F DLS  +
Sbjct: 45  TDLFESWMSKHGKSYRSFEEKLHRFEVFQDNL-KHIDETNKKVSSYWLGLNEFADLSHEE 103

Query: 250 LQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 308
            + +  GL ++       P                 F +  +    DLP++ DWR +G +
Sbjct: 104 FKRKYLGLKIELPKRRDSP---------------EEFSYKDVA---DLPKSVDWRKKGAV 145

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDAL 367
           + VK QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD   N GCNGG MD A 
Sbjct: 146 AHVKNQGACGSCWAFSTVAAVEGINQIVTGNLTALSEQELIDCDKPFNNGCNGGLMDYAF 205

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
            +II NGG+  ++ YPY   E    C   +EE   V +  Y  +P   E+   K +A + 
Sbjct: 206 AFIISNGGLRKEEDYPYVMEEGT--CGEKKEELEVVTISGYHDVPEDNEQSFLKALANQ- 262

Query: 428 PLSVGMNAN--GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           PLSV + A+  G  +YSGG+       +L+  +    YGTS  + Y  VKNSWGS WGEK
Sbjct: 263 PLSVAIEASSRGFQFYSGGIFNGHCGTELDHGVAAVGYGTSKGVDYITVKNSWGSKWGEK 322



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD   N GCNGG MD A  +II NGG+  ++ YPY   E    C
Sbjct: 172 IVTGNLTALSEQELIDCDKPFNNGCNGGLMDYAFAFIISNGGLRKEEDYPYVMEEGT--C 229

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQR 609
              +EE   V +  Y  +P   E+   K +A + PLSV + A+  G  +YSGG+ + +  
Sbjct: 230 GEKKEELEVVTISGYHDVPEDNEQSFLKALANQ-PLSVAIEASSRGFQFYSGGIFNGH-- 286

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG  +  D     Y  VKNSWGS WGEK
Sbjct: 287 -CGTEL-DHGVAAVGYGTSKGVD-----YITVKNSWGSKWGEK 322



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 20/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           F ++M  H K Y S E+ L R E F  N++  ++  ++ S +    +N+F DLS  + + 
Sbjct: 48  FESWMSKHGKSYRSFEEKLHRFEVFQDNLKHIDETNKKVS-SYWLGLNEFADLSHEEFKR 106

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +  GL ++       P                 F +  +    DLP++ DWR +G ++ V
Sbjct: 107 KYLGLKIELPKRRDSP---------------EEFSYKDVA---DLPKSVDWRKKGAVAHV 148

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 149 KNQGACGSCWAFSTVAAVEGINQIVTGNLTALSEQ 183


>gi|144905104|dbj|BAF56427.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 156/325 (48%), Gaps = 46/325 (14%)

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQ---HHDKVYSSVEDLLRRHENFVTNVEKAE 225
           C   WAF       +   +Q  ++ E   Q    + KVY  +++  +R   F  NV+  E
Sbjct: 17  CLGLWAFQV-----SSRTLQDASMHERHEQWMARYGKVYKDLQEKEKRFNIFQENVKYIE 71

Query: 226 DYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAF 285
              +  +     GVN+F DL+  +                +   +   SS+ T T    F
Sbjct: 72  ASNNAGNKPYKLGVNQFTDLTNKEFIA------------TRNKFKGHMSSSITRT--TTF 117

Query: 286 QFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSV 345
           ++ ++      P   DWR EG ++ VK QG C CCWAFSAV   E +H +   +L  LS 
Sbjct: 118 KYENVT----APSTVDWRQEGAVTPVKNQGTCGCCWAFSAVAATEGIHKLSTGNLVSLSE 173

Query: 346 QQLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKV 403
           Q+LVDCD S    GC GG MDDA ++II NGG+ ++  YPY+  +    C   EE     
Sbjct: 174 QELVDCDTSGADQGCQGGLMDDAFKFIIQNGGLNTEAQYPYQGVDGT--CNTNEEVTHVA 231

Query: 404 KVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVI------DLNQRL--- 452
            +  Y  +P   E+ +++ VA + P+SV ++A+G  +  Y  GV        L+  +   
Sbjct: 232 TITGYEDVPSNNEQALQQAVANQ-PISVAIDASGSDFQNYQSGVFTGSCGTQLDHGVAVV 290

Query: 453 -YGTS---IPYWIVKNSWGSDWGEK 473
            YG S     YW+VKNSWG DWGE+
Sbjct: 291 GYGVSDDGTKYWLVKNSWGEDWGEE 315



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 91/159 (57%), Gaps = 15/159 (9%)

Query: 498 LSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ ++LVDCD S    GC GG MDDA ++II NGG+ ++  YPY+  +    C   E
Sbjct: 168 LVSLSEQELVDCDTSGADQGCQGGLMDDAFKFIIQNGGLNTEAQYPYQGVDGT--CNTNE 225

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNP 613
           E      +  Y  +P   E+ +++ VA + P+SV ++A+G  +  Y  GV   +   C  
Sbjct: 226 EVTHVATITGYEDVPSNNEQALQQAVANQ-PISVAIDASGSDFQNYQSGVFTGS---CGT 281

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  +H + +VGYG  +  DGT   YW+VKNSWG DWGE+
Sbjct: 282 QL-DHGVAVVGYGVSD--DGTK--YWLVKNSWGEDWGEE 315



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY  +++  +R   F  NV+  E      +      VN+F DL++ +  
Sbjct: 38  RHEQWMARYGKVYKDLQEKEKRFNIFQENVKYIEASNNAGNKPYKLGVNQFTDLTNKEFI 97

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                         +   +   SS+ T T    F++ ++      P   DWR EG ++ V
Sbjct: 98  A------------TRNKFKGHMSSSITRT--TTFKYENVT----APSTVDWRQEGAVTPV 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C CCWAFSAV   E +H +   NL  LS Q
Sbjct: 140 KNQGTCGCCWAFSAVAATEGIHKLSTGNLVSLSEQ 174


>gi|23344734|gb|AAN28680.1| cathepsin L [Theromyzon tessulatum]
          Length = 351

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 154/300 (51%), Gaps = 52/300 (17%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQS-EDSGTAVF--GVNKFFDLSESDL-QQLTG 255
           H+KVY  +E+   R   F TN +  +D+ +   +G   F  GVN+F D++  +  Q + G
Sbjct: 48  HNKVYVGIEEESLRKTIFATNYKFIKDHNALHATGEKSFTVGVNEFADMTVHEFAQMMNG 107

Query: 256 LNLDSTLED----IQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
           L  DST       + P++ AP                       LP   DWR +G++S+V
Sbjct: 108 LKPDSTRVSGSTYLSPNIDAP-----------------------LPVEVDWRTKGLVSEV 144

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQY 369
           K QG C  CWAFS  G +E  H  +  ++ +LS Q LVDC  S  N GCNGG M +A +Y
Sbjct: 145 KNQGSCGSCWAFSTTGSLEGQHMRKTGTMVDLSEQNLVDCSTSYGNDGCNGGLMTNAFKY 204

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I DN G+ +++AYPY   + +  C   ++      V  +  IP G E+++++ +AT GP+
Sbjct: 205 IKDNKGIDTEEAYPYAGRDGD--CKF-KKNKVGATVTGFVEIPAGNEKKLQEALATVGPV 261

Query: 430 SVGMNAN--GLFYYSGGVID--------LNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           SV ++AN      Y  GV D        L+  +    YG+     Y+IVKNSWG+ WGE+
Sbjct: 262 SVAIDANHQSFMLYKSGVYDEPECDSAQLDHGVLAVGYGSIHGKDYYIVKNSWGTTWGEQ 321



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 14/156 (8%)

Query: 501 LATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEG 558
           L+ + LVDC  S  N GCNGG M +A +YI DN G+ +++AYPY   + +  C   ++  
Sbjct: 176 LSEQNLVDCSTSYGNDGCNGGLMTNAFKYIKDNKGIDTEEAYPYAGRDGD--CKF-KKNK 232

Query: 559 FKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNPKAQ 616
               V  +  IP G E+++++ +AT GP+SV ++AN      Y  GV D  +  C+    
Sbjct: 233 VGATVTGFVEIPAGNEKKLQEALATVGPVSVAIDANHQSFMLYKSGVYD--EPECDSAQL 290

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +H ++ VGYG    KD     Y+IVKNSWG+ WGE+
Sbjct: 291 DHGVLAVGYGSIHGKD-----YYIVKNSWGTTWGEQ 321



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 31/160 (19%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQR-EDSGTAVFEV--NKFFDLSDSDL-Q 103
           F  +H+KVY  +E+   R   F TN +  +D+     +G   F V  N+F D++  +  Q
Sbjct: 44  FKLEHNKVYVGIEEESLRKTIFATNYKFIKDHNALHATGEKSFTVGVNEFADMTVHEFAQ 103

Query: 104 QLTGLNLDSTLED----IQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
            + GL  DST       + P++ AP                       LP   DWR +G+
Sbjct: 104 MMNGLKPDSTRVSGSTYLSPNIDAP-----------------------LPVEVDWRTKGL 140

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +S+VK QG C  CWAFS  G +E  H  +   + +LS Q+
Sbjct: 141 VSEVKNQGSCGSCWAFSTTGSLEGQHMRKTGTMVDLSEQN 180


>gi|37780051|gb|AAP32198.1| cysteine protease 12 [Trifolium repens]
          Length = 343

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 144/298 (48%), Gaps = 45/298 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV---FGVNKFFDLSESDLQQL 253
           + H+ KVY + ++  +R   F  N++  E   S ++G       G+N+F DL+  +    
Sbjct: 43  MTHYGKVYKNPQEREKRLRIFTENLKYIE--ASNNAGNKKPYKLGINQFADLTNEEF--- 97

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                         + +  F  +   + +R   F        +P   DWR +G ++ VK 
Sbjct: 98  -------------IASRNKFKGHMCSSIIRTTTFK--YENTSVPSTVDWRKKGAVTPVKN 142

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG---GCNGGRMDDALQYI 370
           QG+C CCWAFSA+   E +H I    L  LS Q+LVDCD +NG   GC GG MDDA ++I
Sbjct: 143 QGQCGCCWAFSAIAATEGIHKISTGKLVSLSEQELVDCD-TNGVDQGCEGGLMDDAFKFI 201

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           I N G+ ++  YPY+  +    C   E       +  Y  +P   E  ++K VA + P+S
Sbjct: 202 IQNNGISTEAGYPYQGVDGT--CKANEASTSAATITGYEDVPANNENALQKAVANQ-PIS 258

Query: 431 VGMNANG---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           V ++A+G    FY SG            GV  +   +      YW+VKNSWG+DWGE+
Sbjct: 259 VAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGISNDGTKYWLVKNSWGTDWGEE 316



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 17/161 (10%)

Query: 497 KLSRLATEKLVDCDMSNG---GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ ++LVDCD +NG   GC GG MDDA ++II N G+ ++  YPY+  +    C  
Sbjct: 168 KLVSLSEQELVDCD-TNGVDQGCEGGLMDDAFKFIIQNNGISTEAGYPYQGVDGT--CKA 224

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLC 611
            E       +  Y  +P   E  ++K VA + P+SV ++A+G    +Y  GV   +   C
Sbjct: 225 NEASTSAATITGYEDVPANNENALQKAVANQ-PISVAIDASGSDFQFYKSGVFTGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +  +H +  VGYG     DGT   YW+VKNSWG+DWGE+
Sbjct: 281 GTEL-DHGVTAVGYGIS--NDGTK--YWLVKNSWGTDWGEE 316



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 29/186 (15%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNV 73
           LG L   +    L + +IF+          R   +M  + KVY + ++  +R   F  N+
Sbjct: 18  LGLLAIQVTSRTLQDDSIFE----------RHEQWMTHYGKVYKNPQEREKRLRIFTENL 67

Query: 74  EKAEDYQREDSGTAV-FEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDT 132
           +  E      +       +N+F DL++ +                  + +  F  +   +
Sbjct: 68  KYIEASNNAGNKKPYKLGINQFADLTNEEF----------------IASRNKFKGHMCSS 111

Query: 133 EMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNL 192
            +R   F        +P   DWR +G ++ VK QG+C CCWAFSA+   E +H I    L
Sbjct: 112 IIRTTTFK--YENTSVPSTVDWRKKGAVTPVKNQGQCGCCWAFSAIAATEGIHKISTGKL 169

Query: 193 TELSVQ 198
             LS Q
Sbjct: 170 VSLSEQ 175


>gi|438000427|ref|YP_007250532.1| v-cath protein [Thysanoplusia orichalcea NPV]
 gi|429842964|gb|AGA16276.1| v-cath protein [Thysanoplusia orichalcea NPV]
          Length = 323

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 161/332 (48%), Gaps = 56/332 (16%)

Query: 179 GVV--EAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           GVV   A   ++  N  E  V   +K YSS  + LRR + F  N+ +  +    DS  A 
Sbjct: 12  GVVASSAYDLLKAPNYFEEFVHRFNKNYSSETEKLRRFKIFQHNLNEIINKNQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDI-------QPSLQAPFSSNQTDTEMRAFQFN 288
           + +NKF DLS+ + + + TGL+L +  ++        QP  + P                
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVIILDQPPGKGPLD-------------- 115

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
                      FDWR    ++ VK QG C  CWAF+ +  +E+ +AI+ N L  LS QQ+
Sbjct: 116 -----------FDWRRLNKVTNVKNQGTCGACWAFATLASLESQYAIKHNQLINLSEQQM 164

Query: 349 VDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEY 408
           +DCD  + GCNGG +  A + II  GGV  +  YPY+A+ +           F V+VK+ 
Sbjct: 165 IDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEANNNNC---RMNGNKFAVRVKDC 221

Query: 409 SRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--S 456
            R     EE++K  +   GP+ + ++A  +  Y  GVI       LN  +    YG   +
Sbjct: 222 YRYVTVYEEKLKDLLRVAGPIPMAIDAADIVNYKQGVIRYCFNSGLNHAVLLVGYGVENN 281

Query: 457 IPYWIVKNSWGSDWGE----KVEDKVGSSGNR 484
           IP+WI KN+WG+DWGE    +V+  + + G R
Sbjct: 282 IPFWIFKNTWGTDWGEDGYFRVQQNINACGMR 313



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A + II  GGV  +  YPY+A+ +        
Sbjct: 154 NQLINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEANNNNC---RMN 210

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
              F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  GVI    R C    
Sbjct: 211 GNKFAVRVKDCYRYVTVYEEKLKDLLRVAGPIPMAIDAADIVNYKQGVI----RYCFNSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      +IP+WI KN+WG+DWGE
Sbjct: 267 LNHAVLLVGYGVE-----NNIPFWIFKNTWGTDWGE 297



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 43/196 (21%)

Query: 12  KGLGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVT 71
           K L YL  + + VA    ++ +   Y    V RF       +K YSS  + LRR + F  
Sbjct: 3   KILFYLFVYGV-VASSAYDLLKAPNYFEEFVHRF-------NKNYSSETEKLRRFKIFQH 54

Query: 72  NVEKAEDYQREDSGTAVFEVNKFFDLS-DSDLQQLTGLNLDSTLEDI-------QPSLQA 123
           N+ +  +  + DS  A +E+NKF DLS D  + + TGL+L +  ++        QP  + 
Sbjct: 55  NLNEIINKNQNDS--AKYEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVIILDQPPGKG 112

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
           P                           FDWR    ++ VK QG C  CWAF+ +  +E+
Sbjct: 113 PLD-------------------------FDWRRLNKVTNVKNQGTCGACWAFATLASLES 147

Query: 184 MHAIQGNNLTELSVQH 199
            +AI+ N L  LS Q 
Sbjct: 148 QYAIKHNQLINLSEQQ 163


>gi|47169476|tpe|CAE48375.1| TPA: cathepsin Q-like 2 [Rattus norvegicus]
          Length = 342

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 161/311 (51%), Gaps = 45/311 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS---GTAVFGVNKFFDLSESDLQ-QLTG 255
           ++K+YS  E+LL+R   +  NV+K E +  E+S    T +  +N F DL++ + +  +TG
Sbjct: 36  YEKLYSPEEELLKRVV-WEENVKKIELHNRENSLGKNTYIMEINNFADLTDEEFKDMITG 94

Query: 256 LNL--DSTLEDI-QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
           + L  ++T++ + + +L +PF              NS    D LP++ DWR EG +++V+
Sbjct: 95  ITLPINNTMKSLWKRALGSPFP-------------NSWYWRDALPKSIDWRKEGYVTRVR 141

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYI 370
           EQGKC  CWAF   G +E     +   LT LSVQ LVDC    G  GC GG   +A QY+
Sbjct: 142 EQGKCKSCWAFPVAGAIEGQMFKKTGKLTPLSVQNLVDCSKPQGNKGCRGGTTYNAFQYV 201

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           + NGG+ S+  YPYK  E    C    +  +  K+  +  +P  E+  M   +AT+GP++
Sbjct: 202 LQNGGLESEATYPYKGKEGL--CKYNPKNAY-AKITRFVALPEDEDVLMDA-LATKGPVA 257

Query: 431 VGMNA-NGLFYYSGGVI---DLNQRLYGTSIP--------------YWIVKNSWGSDWGE 472
            G++A +G F++  G+      N R+    +               YW++KNSWG  WG 
Sbjct: 258 AGIHASHGSFHFVSGIYHEPKCNNRVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKQWGL 317

Query: 473 KVEDKVGSSGN 483
           K   K+    N
Sbjct: 318 KGYMKIAKDRN 328



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 94/160 (58%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL+ L+ + LVDC    G  GC GG   +A QY++ NGG+ S+  YPYK  E    C   
Sbjct: 168 KLTPLSVQNLVDCSKPQGNKGCRGGTTYNAFQYVLQNGGLESEATYPYKGKEGL--CKYN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA-NGLFYYSGGVIDLNQRLCNP 613
            +  +  K+  +  +P  E+  M   +AT+GP++ G++A +G F++  G+   ++  CN 
Sbjct: 226 PKNAY-AKITRFVALPEDEDVLMDA-LATKGPVAAGIHASHGSFHFVSGI--YHEPKCNN 281

Query: 614 KAQNHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NHA+++VGYG E  + DG +  YW++KNSWG  WG K
Sbjct: 282 RV-NHAVLVVGYGFEGNETDGNN--YWLIKNSWGKQWGLK 318



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 89/155 (57%), Gaps = 21/155 (13%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS---GTAVFEVNKFFDLSDSDLQ-QLTG 107
           ++K+YS  E+LL+R   +  NV+K E + RE+S    T + E+N F DL+D + +  +TG
Sbjct: 36  YEKLYSPEEELLKRVV-WEENVKKIELHNRENSLGKNTYIMEINNFADLTDEEFKDMITG 94

Query: 108 LNL--DSTLEDI-QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           + L  ++T++ + + +L +PF              NS    D LP++ DWR EG +++V+
Sbjct: 95  ITLPINNTMKSLWKRALGSPFP-------------NSWYWRDALPKSIDWRKEGYVTRVR 141

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           EQGKC  CWAF   G +E     +   LT LSVQ+
Sbjct: 142 EQGKCKSCWAFPVAGAIEGQMFKKTGKLTPLSVQN 176


>gi|162459393|ref|NP_001105993.1| cysteine protease component of protease-inhibitor complex precursor
           [Zea mays]
 gi|6682829|dbj|BAA88898.1| cysteine protease component of protease-inhibitor complex [Zea
           mays]
          Length = 465

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 156/291 (53%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H + Y++V +  RR++ F  N+   + + +  D+G   F  G+N+F DL+ +D  + T L
Sbjct: 51  HGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLT-NDEYRATYL 109

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T    +  L A +  +  D E             DLPE+ DWRA+G +++VK+QG 
Sbjct: 110 GA-RTRPQRERKLGARY--HAADNE-------------DLPESVDWRAKGAVAEVKDQGS 153

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
              CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+NGG
Sbjct: 154 YGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGG 213

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + +++ YPYK ++    C V  +    V +  Y  +P  +E+ ++K VA + P+SV + A
Sbjct: 214 IDTEKDYPYKGTDGR--CDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQ-PVSVAIEA 270

Query: 436 NGLFY--YSGGVID----------LNQRLYGT--SIPYWIVKNSWGSDWGE 472
            G  +  YS G+            +    YGT     YWIVKNSWGS WGE
Sbjct: 271 AGTQFQLYSSGIFTGSCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGE 321



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 95/162 (58%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +++ YPYK ++    C
Sbjct: 172 IVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEKDYPYKGTDGR--C 229

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
            V  +    V +  Y  +P  +E+ ++K VA + P+SV + A G  +  YS G+   +  
Sbjct: 230 DVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQ-PVSVAIEAAGTQFQLYSSGIFTGS-- 286

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YWIVKNSWGS WGE
Sbjct: 287 -CG-TALDHGVTAVGYGTENGKD-----YWIVKNSWGSSWGE 321



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 26/160 (16%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +M  H + Y++V +  RR++ F  N+   + +    D+G   F +  N+F DL++ +
Sbjct: 44  YAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLTNDE 103

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG---DDLPEAFDWRAEG 158
            +                   A +   +T  + R  +  +  H    +DLPE+ DWRA+G
Sbjct: 104 YR-------------------ATYLGARTRPQ-RERKLGARYHAADNEDLPESVDWRAKG 143

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +++VK+QG    CWAFS +  VE ++ I   +L  LS Q
Sbjct: 144 AVAEVKDQGSYGSCWAFSTIAAVEGINQIVTGDLISLSEQ 183


>gi|260234113|dbj|BAI44279.1| cysteine proteinase inhibitor precursor [Manduca sexta]
 gi|261336196|dbj|BAH59606.2| cysteine proteinase inhibitor precursor [Manduca sexta]
          Length = 2676

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 154/323 (47%), Gaps = 46/323 (14%)

Query: 175  FSAVGVVEAMHAIQGNNL-TELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG 233
            +      E  H +Q  +L  E    +  +       + +R E F  NV K  +  + + G
Sbjct: 2353 YHEAATAEVYHHLQAEHLFYEFLSTYKPEYIDDRHQMRQRFEIFKENVRKMHELNTHERG 2412

Query: 234  TAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF-NSLRH 292
            TA +GV +F DL+  +      + + ++L D           NQ        QF  ++  
Sbjct: 2413 TATYGVTRFADLTYEEFS-TKHMGMKASLRD----------PNQ-------VQFRKAVIP 2454

Query: 293  GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
                P++FDWR  G ++ VK+QG C  CWAFS  G +E    ++   L  LS Q+LVDCD
Sbjct: 2455 NVTAPDSFDWRDHGAVTGVKDQGSCGSCWAFSVTGNIEGQWKMKTGDLVSLSEQELVDCD 2514

Query: 353  MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
              + GCNGG  D+A + I   GG+ S+  YPY+ S+ +  C   +    +V++     I 
Sbjct: 2515 KLDQGCNGGLPDNAYRAIEQLGGLESEDDYPYEGSDDK--CSFNKTLA-RVQISGAVNI- 2570

Query: 413  YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV----------IDLNQ------------ 450
               E +M KW+   GP+S+G+NAN + +Y GG+           +L+             
Sbjct: 2571 TSNETDMAKWLVKHGPISIGINANAMQFYMGGISHPWRMLCNPSNLDHGVLIVGYGAKDY 2630

Query: 451  RLYGTSIPYWIVKNSWGSDWGEK 473
             L+   +PYWI+KNSWG+ WGE+
Sbjct: 2631 PLFHKHLPYWIIKNSWGTSWGEQ 2653



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 94/156 (60%), Gaps = 5/156 (3%)

Query: 498  LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
            L  L+ ++LVDCD  + GCNGG  D+A + I   GG+ S+  YPY+ S+ +  C   +  
Sbjct: 2502 LVSLSEQELVDCDKLDQGCNGGLPDNAYRAIEQLGGLESEDDYPYEGSDDK--CSFNKTL 2559

Query: 558  GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
              +V++     I    E +M KW+   GP+S+G+NAN + +Y GG+    + LCNP   +
Sbjct: 2560 A-RVQISGAVNI-TSNETDMAKWLVKHGPISIGINANAMQFYMGGISHPWRMLCNPSNLD 2617

Query: 618  HALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
            H ++IVGYG ++       +PYWI+KNSWG+ WGE+
Sbjct: 2618 HGVLIVGYGAKDYPLFHKHLPYWIIKNSWGTSWGEQ 2653



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 20/156 (12%)

Query: 45   FLNFMRDHDKVYSSVEDLLR-RHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F+  +   Y      +R R E F  NV K  +    + GTA + V +F DL+  +  
Sbjct: 2371 FYEFLSTYKPEYIDDRHQMRQRFEIFKENVRKMHELNTHERGTATYGVTRFADLTYEEFS 2430

Query: 104  QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF-NSLRHGDDLPEAFDWRAEGVISK 162
                + + ++L D           NQ        QF  ++      P++FDWR  G ++ 
Sbjct: 2431 -TKHMGMKASLRD----------PNQ-------VQFRKAVIPNVTAPDSFDWRDHGAVTG 2472

Query: 163  VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CWAFS  G +E    ++  +L  LS Q
Sbjct: 2473 VKDQGSCGSCWAFSVTGNIEGQWKMKTGDLVSLSEQ 2508


>gi|537437|gb|AAC35211.1| cysteine proteinase [Hemerocallis hybrid cultivar]
          Length = 359

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/309 (33%), Positives = 148/309 (47%), Gaps = 47/309 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTGLNL 258
           H  V   ++D  +R   F  NV+   ++  +   T    +NKF D++  + +    G  +
Sbjct: 47  HHAVSRDLDDTDKRFNVFKENVKFIHEFNQKKDATYKLALNKFGDMTNQEFRSTYAGSKI 106

Query: 259 DS--TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           D   TL  ++ + +              F +       DLP + DWR +G ++ VK+QG+
Sbjct: 107 DHHMTLRGVKDAGE--------------FSYEKFH---DLPTSVDWREKGAVTGVKDQGQ 149

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS V  VE ++ I+ N L  LS QQLVDCD  N GCNGG MD A  +I +NGG+
Sbjct: 150 CGSCWAFSTVVAVEGINQIKTNELVSLSEQQLVDCDTKNSGCNGGLMDYAFDFIKNNGGL 209

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            S+ +YPY A +   G    E     V +  Y  +P   E  + K VA + P+SV + A+
Sbjct: 210 SSEDSYPYLAEQKSCG---SEANSAVVTIDGYQDVPRNNEAALMKAVANQ-PVSVAIEAS 265

Query: 437 G--LFYYSGGV--------IDLNQRLYGTSI-----PYWIVKNSWGSDWGEK-------- 473
           G    +YS GV        +D      G  +      YWIVKNSWG  WGE         
Sbjct: 266 GYAFQFYSQGVFSGHCGTELDHGVAAVGYGVDDDGKKYWIVKNSWGEGWGESGYIRMERG 325

Query: 474 VEDKVGSSG 482
           ++DK G  G
Sbjct: 326 IKDKRGKCG 334



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 89/161 (55%), Gaps = 14/161 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +  ++L  L+ ++LVDCD  N GCNGG MD A  +I +NGG+ S+ +YPY A +   G  
Sbjct: 168 IKTNELVSLSEQQLVDCDTKNSGCNGGLMDYAFDFIKNNGGLSSEDSYPYLAEQKSCG-- 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRL 610
             E     V +  Y  +P   E  + K VA + P+SV + A+G    +YS GV   +   
Sbjct: 226 -SEANSAVVTIDGYQDVPRNNEAALMKAVANQ-PVSVAIEASGYAFQFYSQGVFSGH--- 280

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           C  +  +H +  VGYG ++  DG    YWIVKNSWG  WGE
Sbjct: 281 CGTEL-DHGVAAVGYGVDD--DGK--KYWIVKNSWGEGWGE 316



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 20/153 (13%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ-LTGL 108
           R H  V   ++D  +R   F  NV+   ++ ++   T    +NKF D+++ + +    G 
Sbjct: 45  RAHHAVSRDLDDTDKRFNVFKENVKFIHEFNQKKDATYKLALNKFGDMTNQEFRSTYAGS 104

Query: 109 NLDS--TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
            +D   TL  ++ + +              F +       DLP + DWR +G ++ VK+Q
Sbjct: 105 KIDHHMTLRGVKDAGE--------------FSYEKFH---DLPTSVDWREKGAVTGVKDQ 147

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           G+C  CWAFS V  VE ++ I+ N L  LS Q 
Sbjct: 148 GQCGSCWAFSTVVAVEGINQIKTNELVSLSEQQ 180


>gi|394331805|gb|AFN27125.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 145/289 (50%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +     D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKACADL-------------SAVPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ L  LS QQLV CD  + GC GG M  A ++++   NG V 
Sbjct: 150 CWAFSAVGNIESQWAVAGHKLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVS 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C    E     ++  Y  +    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK
Sbjct: 269 SFMSYHSGVLTSCIGEQLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEK 317



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           KL RL+ ++LV CD  + GC GG M  A ++++ N  G V ++++YPY +   +   C  
Sbjct: 169 KLVRLSEQQLVSCDHVDNGCGGGLMLQAFEWVLRNMNGTVSTEKSYPYVSGNGDVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  Y  +    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSELAPGARIDGYVSME-SSERVMAAWLAKNGPISIAVDASSFMSYHSGVLTS----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 284 EQLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 16/163 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +     D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKACADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +G ++ VK QG C  CWAFSAVG +E+  A+ G+ L  LS Q
Sbjct: 134 EKGAVTPVKNQGACGSCWAFSAVGNIESQWAVAGHKLVRLSEQ 176


>gi|119964630|ref|YP_950826.1| cathepsin [Maruca vitrata MNPV]
 gi|119514473|gb|ABL76048.1| cathepsin [Maruca vitrata MNPV]
          Length = 324

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 168/338 (49%), Gaps = 54/338 (15%)

Query: 181 VEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVN 240
           + A   ++  N  E  V   +K Y S  + LRR + F  N+ +  +    DS  A + +N
Sbjct: 16  IAAYDLLKAPNYFEEFVLQFNKNYGSEIEKLRRFKIFQHNLNEIINKNQNDSA-AKYEIN 74

Query: 241 KFFDLSESD-LQQLTGLNLDSTLEDI-------QPSLQAPFSSNQTDTEMRAFQFNSLRH 292
           KF DLS+ + + + TGL+L    ++        QP  + PF                   
Sbjct: 75  KFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKGPFE------------------ 116

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
                  FDWR    ++ VK QG C  CWAF+A+  +E+  A++ N L +LS QQ++DCD
Sbjct: 117 -------FDWRRLNKVTNVKNQGVCGACWAFAALASLESQFAMKHNQLIDLSEQQMIDCD 169

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A + +I  GGV  ++ YPY+A+ +   C +   + F VKVK+  R  
Sbjct: 170 SVDAGCNGGLLHTAFEAVIKMGGVQLEKDYPYEAANN--NCRMNSNK-FLVKVKDCYRYI 226

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID--LNQRL--------YGT--SIPYW 460
              EE++K  + + GP+ + ++A  +  Y  G+I   LN  L        YG   +IPYW
Sbjct: 227 IVYEEKLKDLLRSVGPIPMAIDAADIVNYKQGIIKYCLNSGLNHAVLLVGYGVENNIPYW 286

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +++  + + G R  +L  T V+
Sbjct: 287 TFKNTWGTDWGESGYFRLQQNINACGMRN-ELASTAVI 323



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 92/156 (58%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A + +I  GGV  ++ YPY+A+ +   C +  
Sbjct: 155 NQLIDLSEQQMIDCDSVDAGCNGGLLHTAFEAVIKMGGVQLEKDYPYEAANN--NCRMNS 212

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F VKVK+  R     EE++K  + + GP+ + ++A  +  Y  G+I    + C    
Sbjct: 213 NK-FLVKVKDCYRYIIVYEEKLKDLLRSVGPIPMAIDAADIVNYKQGII----KYCLNSG 267

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      +IPYW  KN+WG+DWGE
Sbjct: 268 LNHAVLLVGYGVE-----NNIPYWTFKNTWGTDWGE 298



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 35/170 (20%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P   F  F+   +K Y S  + LRR + F  N+ +  +  + DS  A +E+NKF DL
Sbjct: 22  LKAP-NYFEEFVLQFNKNYGSEIEKLRRFKIFQHNLNEIINKNQNDSA-AKYEINKFSDL 79

Query: 98  S-DSDLQQLTGLNLDSTLEDI-------QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLP 149
           S D  + + TGL+L    ++        QP  + PF                        
Sbjct: 80  SKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKGPFE----------------------- 116

Query: 150 EAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
             FDWR    ++ VK QG C  CWAF+A+  +E+  A++ N L +LS Q 
Sbjct: 117 --FDWRRLNKVTNVKNQGVCGACWAFAALASLESQFAMKHNQLIDLSEQQ 164


>gi|357129125|ref|XP_003566217.1| PREDICTED: thiol protease SEN102-like [Brachypodium distachyon]
          Length = 380

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 141/277 (50%), Gaps = 23/277 (8%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR   F  N     ++           +N+F DL+  + ++    +  S     +P    
Sbjct: 67  RRFNVFRENARLVHEFNLRRDAPYKLRLNRFADLTSDEFRRSYASSRVSHHRMFKPRAAN 126

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
               +         + +S  HG  LP + DWR +G ++ VK+QG+C  CWAFS +  VE 
Sbjct: 127 NNDDDDD-------KGSSFTHGGALPTSVDWREKGAVTGVKDQGQCGSCWAFSTIAAVEG 179

Query: 332 MHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 390
           ++AI+ N+LT LS QQLVDCD  +N GC+GG MDDA  YI  +GGV ++++YPY+A +S 
Sbjct: 180 INAIRTNNLTSLSEQQLVDCDTKTNAGCDGGLMDDAFSYIAKHGGVAAEKSYPYRARQSS 239

Query: 391 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKK-WVATRGPLSVGMNANGLFYYSGGVI--- 446
             C   +     V +  Y  +P  +E  +KK   A    +++    +   +YS GV    
Sbjct: 240 -SCNSKKAAAAVVSIDGYEDVPRNDETALKKAVAAQPVAVAIEAGGSHFQFYSEGVFAGK 298

Query: 447 ---DLNQRL----YGTSI---PYWIVKNSWGSDWGEK 473
              +L+  +    YG ++    YWIVKNSWG +WGEK
Sbjct: 299 CGTELDHGVAAVGYGVTVDGTKYWIVKNSWGEEWGEK 335



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 90/165 (54%), Gaps = 11/165 (6%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +  + L+ L+ ++LVDCD  +N GC+GG MDDA  YI  +GGV ++++YPY+A +S 
Sbjct: 180 INAIRTNNLTSLSEQQLVDCDTKTNAGCDGGLMDDAFSYIAKHGGVAAEKSYPYRARQSS 239

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKK-WVATRGPLSVGMNANGLFYYSGGVIDLN 607
             C   +     V +  Y  +P  +E  +KK   A    +++    +   +YS GV    
Sbjct: 240 -SCNSKKAAAAVVSIDGYEDVPRNDETALKKAVAAQPVAVAIEAGGSHFQFYSEGVFAGK 298

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              C  +  +H +  VGYG     DGT   YWIVKNSWG +WGEK
Sbjct: 299 ---CGTEL-DHGVAAVGYG--VTVDGTK--YWIVKNSWGEEWGEK 335



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 7/149 (4%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R    V   + +  RR   F  N     ++           +N+F DL+  + ++    +
Sbjct: 53  RARHTVSRDLAEKSRRFNVFRENARLVHEFNLRRDAPYKLRLNRFADLTSDEFRRSYASS 112

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             S     +P        +         + +S  HG  LP + DWR +G ++ VK+QG+C
Sbjct: 113 RVSHHRMFKPRAANNNDDDDD-------KGSSFTHGGALPTSVDWREKGAVTGVKDQGQC 165

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS +  VE ++AI+ NNLT LS Q
Sbjct: 166 GSCWAFSTIAAVEGINAIRTNNLTSLSEQ 194


>gi|449454309|ref|XP_004144898.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
 gi|449471311|ref|XP_004153272.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 349

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 155/298 (52%), Gaps = 41/298 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K Y S+E+ L R E F+ N+ K  D  ++   +   G+N+F DLS  + +
Sbjct: 46  LFESWMSKHSKAYRSIEEKLHRFEIFLDNL-KHIDETNKKVSSYWLGLNEFADLSHEEFK 104

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL ++             F   ++    R F +  +   +DLPE+ DWR +G ++ 
Sbjct: 105 SKYLGLRVE-------------FPRKRSS---RGFSYGDV---EDLPESVDWRTKGAVTP 145

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD S N GC GG MD A QY
Sbjct: 146 VKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRSFNNGCYGGLMDYAFQY 205

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGP 428
           I+ N G+  ++ YPY     E G  + E+E F+ V +  Y  +P  +E+ + K ++ + P
Sbjct: 206 IMSNSGLRKEEDYPYLM---EEGRCIREKEQFEVVTISGYEDVPANDEQSLLKALSHQ-P 261

Query: 429 LSVGMNANG--LFYYSGGVID----------LNQRLYGTS--IPYWIVKNSWGSDWGE 472
           +SV + A+     +Y GG+            +    YG+S    Y IVKNSWG  WGE
Sbjct: 262 VSVAIEASSRNFQFYKGGIFTGRCGTQMDHGVTAVGYGSSEGTDYIIVKNSWGPKWGE 319



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 17/163 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD S N GC GG MD A QYI+ N G+  ++ YPY     E G 
Sbjct: 170 IVTGNLTSLSEQELIDCDRSFNNGCYGGLMDYAFQYIMSNSGLRKEEDYPYLM---EEGR 226

Query: 552 LVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
            + E+E F+ V +  Y  +P  +E+ + K ++ + P+SV + A+     +Y GG+     
Sbjct: 227 CIREKEQFEVVTISGYEDVPANDEQSLLKALSHQ-PVSVAIEASSRNFQFYKGGIFTGR- 284

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C  +  +H +  VGYG  E  D     Y IVKNSWG  WGE
Sbjct: 285 --CGTQ-MDHGVTAVGYGSSEGTD-----YIIVKNSWGPKWGE 319



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 37/199 (18%)

Query: 17  LHTFMIKVALLESNIFQTR---------GY-------LNSPVTRFLNFMRDHDKVYSSVE 60
           L TF     +L + +F T          GY       ++  +  F ++M  H K Y S+E
Sbjct: 3   LSTFSKATLILSATLFITYATAHDFSIVGYSPEHLASMDKTIELFESWMSKHSKAYRSIE 62

Query: 61  DLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQP 119
           + L R E F+ N++  ++  ++ S +    +N+F DLS  + + +  GL ++        
Sbjct: 63  EKLHRFEIFLDNLKHIDETNKKVS-SYWLGLNEFADLSHEEFKSKYLGLRVE-------- 113

Query: 120 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 179
                F   ++    R F +  +   +DLPE+ DWR +G ++ VK QG C  CWAFS V 
Sbjct: 114 -----FPRKRSS---RGFSYGDV---EDLPESVDWRTKGAVTPVKNQGSCGSCWAFSTVA 162

Query: 180 VVEAMHAIQGNNLTELSVQ 198
            VE ++ I   NLT LS Q
Sbjct: 163 AVEGINQIVTGNLTSLSEQ 181


>gi|56718881|gb|AAW28151.1| westerpain-1 [Paragonimus westermani]
          Length = 322

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 150/299 (50%), Gaps = 44/299 (14%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E   + + KVY++ ED  +R   F  N+ +A+  Q +D GTA +GV +F DL+  +  
Sbjct: 26  LYEQFKRDYGKVYAN-EDDQKRFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEFA 84

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
                            L AP +++Q    ++  +   L+     PE  DWRA+G ++ V
Sbjct: 85  A--------------KYLSAPVNNDQ----VKRVRPTGLKAA---PERIDWRAKGAVTAV 123

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII 371
           + QG C  CWAFS  G VE    I+   L  LS QQLVDCD +  GCNGG    +   I+
Sbjct: 124 ENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAAQGCNGGWPASSYLEIM 183

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG-EEEEMKKWVATRGPLS 430
             GG+ S+  YPY     E+ C + +E   K+  K    I  G EEE+   ++A  GPLS
Sbjct: 184 YMGGLESESDYPYVG--VEQTCALNKE---KLVAKIDDSIVLGPEEEDHAAYLAEHGPLS 238

Query: 431 VGMNANGLFYYSGGVI----------DLNQRLYGTS------IPYWIVKNSWGSDWGEK 473
             +NA  L YY  GV+          +LN  +          +PYWI+KNSWG+DWGEK
Sbjct: 239 TLLNAVALQYYQSGVLKPTFEECPDTELNHAVLTVGYDKEGDMPYWIIKNSWGTDWGEK 297



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 87/157 (55%), Gaps = 11/157 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCD +  GCNGG    +   I+  GG+ S+  YPY   E  + C + +E
Sbjct: 151 QLVSLSKQQLVDCDRAAQGCNGGWPASSYLEIMYMGGLESESDYPYVGVE--QTCALNKE 208

Query: 557 EGFKVKVKEYSRIPYG-EEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
              K+  K    I  G EEE+   ++A  GPLS  +NA  L YY  GV+      C    
Sbjct: 209 ---KLVAKIDDSIVLGPEEEDHAAYLAEHGPLSTLLNAVALQYYQSGVLKPTFEECPDTE 265

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NHA++ VGY +E       +PYWI+KNSWG+DWGEK
Sbjct: 266 LNHAVLTVGYDKE-----GDMPYWIIKNSWGTDWGEK 297



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 22/155 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           +  F RD+ KVY++ ED  +R   F  N+ +A+  Q +D GTA + V +F DL+  +   
Sbjct: 27  YEQFKRDYGKVYAN-EDDQKRFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEFAA 85

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                           L AP +++Q    ++  +   L+     PE  DWRA+G ++ V+
Sbjct: 86  --------------KYLSAPVNNDQ----VKRVRPTGLKAA---PERIDWRAKGAVTAVE 124

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG C  CWAFS  G VE    I+   L  LS Q 
Sbjct: 125 NQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQ 159


>gi|37780045|gb|AAP32195.1| cysteine protease 5 [Trifolium repens]
          Length = 343

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 144/298 (48%), Gaps = 45/298 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV---FGVNKFFDLSESDLQQL 253
           + H+ KVY + ++  +R   F  N++  E   S ++G       G+N+F DL+  +    
Sbjct: 43  MTHYGKVYKNPQEREKRLRIFTENLKYIE--ASNNAGNNKPYKLGINQFADLTNEEF--- 97

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                         + +  F  +   + +R   F        +P   DWR +G ++ VK 
Sbjct: 98  -------------IASRNKFKGHMCSSIIRTTTFK--YENTSVPSTVDWRKKGAVTPVKN 142

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG---GCNGGRMDDALQYI 370
           QG+C CCWAFSA+   E +H I    L  LS Q+LVDCD +NG   GC GG MDDA ++I
Sbjct: 143 QGQCGCCWAFSAIAATEGIHKISTGKLVSLSEQELVDCD-TNGVDQGCEGGLMDDAFKFI 201

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           I N G+ ++  YPY+  +    C   E       +  Y  +P   E  ++K VA + P+S
Sbjct: 202 IQNNGISTEAGYPYQGVDGT--CKANEASTSAATITGYEDVPANNENALQKAVANQ-PIS 258

Query: 431 VGMNANG---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           V ++A+G    FY SG            GV  +   +      YW+VKNSWG+DWGE+
Sbjct: 259 VAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGISNDGTKYWLVKNSWGTDWGEE 316



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 17/161 (10%)

Query: 497 KLSRLATEKLVDCDMSNG---GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ ++LVDCD +NG   GC GG MDDA ++II N G+ ++  YPY+  +    C  
Sbjct: 168 KLVSLSEQELVDCD-TNGVDQGCEGGLMDDAFKFIIQNNGISTEAGYPYQGVDGT--CKA 224

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLC 611
            E       +  Y  +P   E  ++K VA + P+SV ++A+G    +Y  GV   +   C
Sbjct: 225 NEASTSAATITGYEDVPANNENALQKAVANQ-PISVAIDASGSDFQFYKSGVFTGS---C 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +  +H +  VGYG     DGT   YW+VKNSWG+DWGE+
Sbjct: 281 GTEL-DHGVTAVGYGIS--NDGTK--YWLVKNSWGTDWGEE 316



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 29/186 (15%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNV 73
           LG L   +    L + +IF+          R   +M  + KVY + ++  +R   F  N+
Sbjct: 18  LGLLAIQVTSRTLQDDSIFE----------RHEQWMTHYGKVYKNPQEREKRLRIFTENL 67

Query: 74  EKAEDYQREDSGTAV-FEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDT 132
           +  E      +       +N+F DL++ +                  + +  F  +   +
Sbjct: 68  KYIEASNNAGNNKPYKLGINQFADLTNEEF----------------IASRNKFKGHMCSS 111

Query: 133 EMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNL 192
            +R   F        +P   DWR +G ++ VK QG+C CCWAFSA+   E +H I    L
Sbjct: 112 IIRTTTFK--YENTSVPSTVDWRKKGAVTPVKNQGQCGCCWAFSAIAATEGIHKISTGKL 169

Query: 193 TELSVQ 198
             LS Q
Sbjct: 170 VSLSEQ 175


>gi|356517426|ref|XP_003527388.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 343

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 154/322 (47%), Gaps = 42/322 (13%)

Query: 172 CWAFSAVGVVEAMHAIQGNNLTELSVQ---HHDKVYSSVEDLLRRHENFVTNVEKAEDYQ 228
           C  F A  V      +Q  ++ E   Q    + KVY   ++  +R   F  NV   E + 
Sbjct: 17  CMGFLAFQVT--CRTLQDASMYERHAQWMARYAKVYKDPQEREKRFRIFKENVNYIETFN 74

Query: 229 SEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN 288
           S D+ +    +N+F DL+  +               I P  +       + T    F++ 
Sbjct: 75  SADNKSYKLDINQFADLTNEEF--------------IAPRNRFKGHMCSSITRTTTFKYE 120

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
           ++     +P   DWR +G ++ +K+QG+C CCWAFSAV   E +HA+    L  LS Q++
Sbjct: 121 NV---TVIPSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALNAGKLISLSEQEV 177

Query: 349 VDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           VDCD    + GC GG MD A ++II N G+ ++  YPYKA++ +  C           + 
Sbjct: 178 VDCDTKGQDQGCAGGFMDGAFKFIIQNHGLNTEPNYPYKAADGK--CNAKAAANHAATIT 235

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNANG---LFYYSG------------GVIDLNQR 451
            Y  +P   E+ ++K VA + P+SV ++A+G    FY SG            GV  +   
Sbjct: 236 GYEDVPVNNEKALQKAVANQ-PVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYG 294

Query: 452 LYGTSIPYWIVKNSWGSDWGEK 473
           +      YW+VKNSWG++WGE+
Sbjct: 295 VSADGTEYWLVKNSWGTEWGEE 316



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ +++VDCD    + GC GG MD A ++II N G+ ++  YPYKA++ +  C   
Sbjct: 168 KLISLSEQEVVDCDTKGQDQGCAGGFMDGAFKFIIQNHGLNTEPNYPYKAADGK--CNAK 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
                   +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 226 AAANHAATITGYEDVPVNNEKALQKAVANQ-PVSVAIDASGSDFQFYKSGVFTGS---CG 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG++WGE+
Sbjct: 282 TEL-DHGVTAVGYGVS--ADGTE--YWLVKNSWGTEWGEE 316



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   ++  +R   F  NV   E +   D+ +   ++N+F DL++ +  
Sbjct: 38  RHAQWMARYAKVYKDPQEREKRFRIFKENVNYIETFNSADNKSYKLDINQFADLTNEEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +       + T    F++ ++     +P   DWR +G ++ +
Sbjct: 97  -------------IAPRNRFKGHMCSSITRTTTFKYENV---TVIPSTVDWRQKGAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +HA+    L  LS Q
Sbjct: 141 KDQGQCGCCWAFSAVAATEGIHALNAGKLISLSEQ 175


>gi|343477445|emb|CCD11724.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
          Length = 380

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 157/318 (49%), Gaps = 35/318 (11%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVNVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  PEA DWR +G ++ VK+QG+C  CWAFSA+G +E    + G+ LT LS Q LV
Sbjct: 124 ----GKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD ++ GC GG MDDA ++I+  + G V ++Q+YPY +            +    K+++
Sbjct: 180 SCDTNDFGCEGGLMDDAFKWIVSSNKGNVFTEQSYPYASGGGNVPACDKSGKVVGAKIRD 239

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----T 455
           +  +P  +E  + +W+A  GP+++ ++A     Y+GGV        +D    L G    +
Sbjct: 240 HVDLPE-DENAIAEWLAKNGPVAIAVDATSFQSYTGGVLTSCISEHLDHGVLLVGYDDTS 298

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSW   WGE+
Sbjct: 299 KPPYWIIKNSWSKGWGEE 316



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 89/158 (56%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVG 554
           +L+ L+ + LV CD ++ GC GG MDDA ++I+  + G V ++Q+YPY +          
Sbjct: 169 ELTSLSEQMLVSCDTNDFGCEGGLMDDAFKWIVSSNKGNVFTEQSYPYASGGGNVPACDK 228

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
             +    K++++  +P  +E  + +W+A  GP+++ ++A     Y+GGV+      C  +
Sbjct: 229 SGKVVGAKIRDHVDLPE-DENAIAEWLAKNGPVAIAVDATSFQSYTGGVLT----SCISE 283

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H +++VGY +  K      PYWI+KNSW   WGE+
Sbjct: 284 HLDHGVLLVGYDDTSKP-----PYWIIKNSWSKGWGEE 316



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                PEA DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVNVST-------------GKAPEAVDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFSA+G +E    + G+ LT LS Q
Sbjct: 142 KDQGQCGSCWAFSAIGNIEGQWKVAGHELTSLSEQ 176


>gi|195484843|ref|XP_002090843.1| GE12574 [Drosophila yakuba]
 gi|194176944|gb|EDW90555.1| GE12574 [Drosophila yakuba]
          Length = 341

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 138/261 (52%), Gaps = 43/261 (16%)

Query: 237 FGVNKFFDLSESDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD 295
             VNK+ DL   + +QL  G N       +   L+A      TD   +   F S  H   
Sbjct: 76  LAVNKYADLLHHEFRQLMNGFNYT-----LHKQLRA------TDDSFKGVTFISPAHVT- 123

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR++G ++ VK+QG C  CWAFS+ G +E  H  +   L  LS Q LVDC    
Sbjct: 124 LPKSVDWRSKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKY 183

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYS 409
            N GCNGG MD+A +YI DNGG+ ++++YPY+A +      +G +   + GF       +
Sbjct: 184 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTIGATDRGF-------T 236

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV-----IDLNQRLYGTSI----- 457
            IP G+E++M + VAT GP+SV ++A+     +YS GV      D     +G  +     
Sbjct: 237 DIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGT 296

Query: 458 -----PYWIVKNSWGSDWGEK 473
                 YW+VKNSWG+ WG+K
Sbjct: 297 DESGDDYWLVKNSWGTTWGDK 317



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 104/170 (61%), Gaps = 25/170 (14%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +GVL S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +  
Sbjct: 165 SGVLVS----LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDS 220

Query: 549 ----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGG 602
               +G +   + GF       + IP G+E++M + VAT GP+SV ++A+     +YS G
Sbjct: 221 CHFNKGTIGATDRGF-------TDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEG 273

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           V   N+  C+ +  +H +++VG+G +E  D     YW+VKNSWG+ WG+K
Sbjct: 274 V--YNEPQCDAQNLDHGVLVVGFGTDESGD----DYWLVKNSWGTTWGDK 317



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 16/155 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSDLQQ 104
           F  +H K Y    +   R + F  N  K A+  QR   G   F+  VNK+ DL   + +Q
Sbjct: 32  FKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 91

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           L  G N       +   L+A      TD   +   F S  H   LP++ DWR++G ++ V
Sbjct: 92  LMNGFNYT-----LHKQLRA------TDDSFKGVTFISPAHVT-LPKSVDWRSKGAVTAV 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS+ G +E  H  +   L  LS Q
Sbjct: 140 KDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQ 174


>gi|18141281|gb|AAL60578.1|AF454956_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 445

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 160/294 (54%), Gaps = 42/294 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V++H K Y+ + +  +R E F+ N++  +++ S  + +   G+ +F DL+    ++   +
Sbjct: 42  VENH-KNYNGLGEKDKRFEIFMDNLKFVQEHNSVPNQSYELGLTRFADLTN---EEFRAI 97

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L S +E  + S+++             +  N    GD LP+  DWRA+G +  VK+QG 
Sbjct: 98  YLRSKMERTRDSVKS-----------ERYLHNV---GDKLPDEVDWRAKGAVVPVKDQGS 143

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFSA+G VE ++ I+   L  LS Q+LVDCD S N GC GG MD A Q+II NGG
Sbjct: 144 CGSCWAFSAIGAVEGINQIKTGELVSLSEQELVDCDTSYNNGCGGGLMDYAFQFIISNGG 203

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + +++ YPY A++ +  C   ++    V +  Y  +P   E  +KK +A + P+SV + A
Sbjct: 204 IDTEEDYPYTATD-DNICNTDKKNTRVVTIDGYEDVPE-NENSLKKALANQ-PISVAIEA 260

Query: 436 NGL---FYYSG------------GVIDLNQRLYGTS--IPYWIVKNSWGSDWGE 472
            G     Y SG            GV+ +    YGTS    YWI++NSWGS+WGE
Sbjct: 261 GGRGFQLYKSGVFTGTCGTALDHGVVAVG---YGTSEGQDYWIIRNSWGSNWGE 311



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 15/158 (9%)

Query: 497 KLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           +L  L+ ++LVDCD S N GC GG MD A Q+II NGG+ +++ YPY A++ +  C   +
Sbjct: 166 ELVSLSEQELVDCDTSYNNGCGGGLMDYAFQFIISNGGIDTEEDYPYTATD-DNICNTDK 224

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNP 613
           +    V +  Y  +P   E  +KK +A + P+SV + A G  +  Y  GV       C  
Sbjct: 225 KNTRVVTIDGYEDVPE-NENSLKKALANQ-PISVAIEAGGRGFQLYKSGVF---TGTCG- 278

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            A +H ++ VGYG  E +D     YWI++NSWGS+WGE
Sbjct: 279 TALDHGVVAVGYGTSEGQD-----YWIIRNSWGSNWGE 311



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 17/157 (10%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V  F  ++ ++ K Y+ + +  +R E F+ N++  +++    + +    + +F DL++  
Sbjct: 34  VKMFERWLVENHKNYNGLGEKDKRFEIFMDNLKFVQEHNSVPNQSYELGLTRFADLTN-- 91

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            ++   + L S +E  + S+++             +  N    GD LP+  DWRA+G + 
Sbjct: 92  -EEFRAIYLRSKMERTRDSVKS-----------ERYLHNV---GDKLPDEVDWRAKGAVV 136

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CWAFSA+G VE ++ I+   L  LS Q
Sbjct: 137 PVKDQGSCGSCWAFSAIGAVEGINQIKTGELVSLSEQ 173


>gi|348565006|ref|XP_003468295.1| PREDICTED: cathepsin W-like [Cavia porcellus]
          Length = 375

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 55/309 (17%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDS 260
           ++ YS+  +  RR + FV N+  A+  Q E+ GTA FGV  F DL+E +  QL G N   
Sbjct: 50  NRSYSNQAEYARRLDIFVHNLATAQRLQEEELGTAEFGVTPFSDLTEEEFGQLYG-NRRV 108

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACC 320
             +D++ + +  F   +                + + ++ DWR   +IS VK QG C CC
Sbjct: 109 ARKDLRVARKVSFDKQE----------------ELMSQSCDWRKAHIISPVKNQGNCRCC 152

Query: 321 WAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQ 380
           WA +A G +EAM  I+      LSVQ+L+DC     GC GG + DA   +++  G+ S++
Sbjct: 153 WAIAAAGNIEAMWNIRYKVSVTLSVQELLDCARCEDGCAGGYIWDAFITVLNYSGLASEK 212

Query: 381 AYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY 440
            YP++   +   CL          + +Y  +P  +E+ + ++VAT+GP++V +N+  L +
Sbjct: 213 DYPFRGHANIHKCLASNYRKV-AWIYDYIMLP-RDEQGIARYVATQGPITVIINSKILQH 270

Query: 441 YSGGVI----------------------------------DLNQ--RLYGTSIPYWIVKN 464
           Y  G+I                                  DL+   R    SIPYWI+KN
Sbjct: 271 YKKGIIKGTSSKCDPWFVDHYVLLVGYGRSKAEEEKWTETDLSHSNRPPRHSIPYWILKN 330

Query: 465 SWGSDWGEK 473
           SWG++WGE+
Sbjct: 331 SWGANWGEE 339



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 17/167 (10%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ ++L+DC     GC GG + DA   +++  G+ S++ YP++   +   CL        
Sbjct: 175 LSVQELLDCARCEDGCAGGYIWDAFITVLNYSGLASEKDYPFRGHANIHKCLASNYRKV- 233

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
             + +Y  +P  +E+ + ++VAT+GP++V +N+  L +Y  G+I      C+P   +H +
Sbjct: 234 AWIYDYIMLP-RDEQGIARYVATQGPITVIINSKILQHYKKGIIKGTSSKCDPWFVDHYV 292

Query: 621 IIVGYG----EEEKKDGT-----------SIPYWIVKNSWGSDWGEK 652
           ++VGYG    EEEK   T           SIPYWI+KNSWG++WGE+
Sbjct: 293 LLVGYGRSKAEEEKWTETDLSHSNRPPRHSIPYWILKNSWGANWGEE 339



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F    ++ YS+  +  RR + FV N+  A+  Q E+ GTA F V  F DL++ +  Q
Sbjct: 42  FKLFQIQFNRSYSNQAEYARRLDIFVHNLATAQRLQEEELGTAEFGVTPFSDLTEEEFGQ 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           L G N     +D++ + +  F   +                + + ++ DWR   +IS VK
Sbjct: 102 LYG-NRRVARKDLRVARKVSFDKQE----------------ELMSQSCDWRKAHIISPVK 144

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C CCWA +A G +EAM  I+      LSVQ
Sbjct: 145 NQGNCRCCWAIAAAGNIEAMWNIRYKVSVTLSVQ 178


>gi|357473427|ref|XP_003606998.1| Cysteine proteinase [Medicago truncatula]
 gi|355508053|gb|AES89195.1| Cysteine proteinase [Medicago truncatula]
          Length = 362

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 155/323 (47%), Gaps = 72/323 (22%)

Query: 193 TELSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFD 244
             L  +HH         KVYSS ++   R + F +N+ +A+ +Q  D  +AV GV +F D
Sbjct: 40  VRLGAEHHFNLFKHKFGKVYSSKDEHDYRFKIFKSNLNRAKRHQLMDP-SAVHGVTRFSD 98

Query: 245 LSESDLQQLT------GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPE 298
           L+  + ++        GL  D+    I P+                         D+LP+
Sbjct: 99  LTPREFRKSVLGLRGVGLPKDANAAPILPT-------------------------DNLPK 133

Query: 299 AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM----- 353
            FDWR +G ++ VK QG C  CW+FS  G +E  H +    L  LS QQLVDCD      
Sbjct: 134 DFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGAHFLSTGKLVSLSEQQLVDCDHECDPE 193

Query: 354 ----SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
                + GCNGG M+ A +YI+ +GGV+ ++ YPY  S ++RG    +++     V  +S
Sbjct: 194 QPGSCDAGCNGGLMNSAFEYILKSGGVMREEDYPY--SGTDRGSCKFDKKKIAASVANFS 251

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQRL--------YGTSI- 457
            +   +E+++   +   GPL++ +NA  +  Y GGV      ++RL        YG+   
Sbjct: 252 VVSL-DEDQIAANLVKNGPLAIALNAVYMQTYVGGVSCPYICSKRLDHGVLLVGYGSGAY 310

Query: 458 --------PYWIVKNSWGSDWGE 472
                   PYWI+KNSWG  WGE
Sbjct: 311 SPIRLKEKPYWIIKNSWGETWGE 333



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 29/172 (16%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GCNGG M+ A +YI+ +GGV+ ++ YPY  S +
Sbjct: 174 KLVSLSEQQLVDCDHECDPEQPGSCDAGCNGGLMNSAFEYILKSGGVMREEDYPY--SGT 231

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +RG    +++     V  +S +   +E+++   +   GPL++ +NA  +  Y GGV    
Sbjct: 232 DRGSCKFDKKKIAASVANFSVVSL-DEDQIAANLVKNGPLAIALNAVYMQTYVGGVS--C 288

Query: 608 QRLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ K  +H +++VGYG         +EK      PYWI+KNSWG  WGE
Sbjct: 289 PYICS-KRLDHGVLLVGYGSGAYSPIRLKEK------PYWIIKNSWGETWGE 333



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 32/161 (19%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F     KVYSS ++   R + F +N+ +A+ +Q  D  +AV  V +F DL+  + +
Sbjct: 47  HFNLFKHKFGKVYSSKDEHDYRFKIFKSNLNRAKRHQLMDP-SAVHGVTRFSDLTPREFR 105

Query: 104 QLT------GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           +        GL  D+    I P+                         D+LP+ FDWR +
Sbjct: 106 KSVLGLRGVGLPKDANAAPILPT-------------------------DNLPKDFDWREK 140

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G ++ VK QG C  CW+FS  G +E  H +    L  LS Q
Sbjct: 141 GAVTAVKNQGSCGSCWSFSTTGALEGAHFLSTGKLVSLSEQ 181


>gi|449500145|ref|XP_004161017.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 349

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 155/298 (52%), Gaps = 41/298 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K Y S+E+ L R E F+ N+ K  D  ++   +   G+N+F DLS  + +
Sbjct: 46  LFESWMSKHSKTYRSIEEKLHRFEIFLDNL-KHIDETNKKVSSYWLGLNEFADLSHEEFK 104

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  GL ++             F   ++    R F +  +   +DLPE+ DWR +G ++ 
Sbjct: 105 SKYLGLRVE-------------FPRKRSS---RGFSYGDV---EDLPESVDWRTKGAVTP 145

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD S N GC GG MD A QY
Sbjct: 146 VKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRSFNNGCYGGLMDYAFQY 205

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGP 428
           I+ N G+  ++ YPY     E G  + E+E F+ V +  Y  +P  +E+ + K ++ + P
Sbjct: 206 IMSNSGLRKEEDYPYLM---EEGRCIREKEQFEVVTISGYEDVPANDEQSLLKALSHQ-P 261

Query: 429 LSVGMNANG--LFYYSGGVID----------LNQRLYGTS--IPYWIVKNSWGSDWGE 472
           +SV + A+     +Y GG+            +    YG+S    Y IVKNSWG  WGE
Sbjct: 262 VSVAIEASSRNFQFYKGGIFTGRCGTQMDHGVTAVGYGSSEGTDYIIVKNSWGPKWGE 319



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 17/163 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD S N GC GG MD A QYI+ N G+  ++ YPY     E G 
Sbjct: 170 IVTGNLTSLSEQELIDCDRSFNNGCYGGLMDYAFQYIMSNSGLRKEEDYPYLM---EEGR 226

Query: 552 LVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
            + E+E F+ V +  Y  +P  +E+ + K ++ + P+SV + A+     +Y GG+     
Sbjct: 227 CIREKEQFEVVTISGYEDVPANDEQSLLKALSHQ-PVSVAIEASSRNFQFYKGGIFTGR- 284

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C  +  +H +  VGYG  E  D     Y IVKNSWG  WGE
Sbjct: 285 --CGTQ-MDHGVTAVGYGSSEGTD-----YIIVKNSWGPKWGE 319



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 37/199 (18%)

Query: 17  LHTFMIKVALLESNIFQTR---------GY-------LNSPVTRFLNFMRDHDKVYSSVE 60
           L TF     +L + +F T          GY       ++  +  F ++M  H K Y S+E
Sbjct: 3   LSTFSKATLILSATLFITYAIAHDFSIVGYSPEHLASMDKTIELFESWMSKHSKTYRSIE 62

Query: 61  DLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQP 119
           + L R E F+ N++  ++  ++ S +    +N+F DLS  + + +  GL ++        
Sbjct: 63  EKLHRFEIFLDNLKHIDETNKKVS-SYWLGLNEFADLSHEEFKSKYLGLRVE-------- 113

Query: 120 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 179
                F   ++    R F +  +   +DLPE+ DWR +G ++ VK QG C  CWAFS V 
Sbjct: 114 -----FPRKRSS---RGFSYGDV---EDLPESVDWRTKGAVTPVKNQGSCGSCWAFSTVA 162

Query: 180 VVEAMHAIQGNNLTELSVQ 198
            VE ++ I   NLT LS Q
Sbjct: 163 AVEGINQIVTGNLTSLSEQ 181


>gi|109119897|dbj|BAE96008.1| cysteine proteinase [Triticum aestivum]
          Length = 377

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 147/292 (50%), Gaps = 32/292 (10%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR   F +NV     +           +N+F D+S+++ +     +  S      P+   
Sbjct: 64  RRFGTFKSNVHFIHSHNKRGDRPYRLRLNRFGDMSQAEFRATFAGSRVSDRRRDGPA--- 120

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
                 T   +  F + ++ +  DLP + DWR +G ++ VK QGKC  CWAFS V  VE 
Sbjct: 121 ------TPPSVPGFMYAAV-NVSDLPRSVDWRQKGAVTGVKNQGKCGSCWAFSTVVSVEG 173

Query: 332 MHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 390
           ++AI+   L  LS Q+L+DCD + N GC GG MD+A +YI  NGG+ ++ AYPY+A+   
Sbjct: 174 INAIRTGKLVSLSEQELIDCDTADNDGCEGGLMDNAFEYIKKNGGLTTEAAYPYRAANGT 233

Query: 391 -RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV-- 445
            +   V +     V +  +  +P   EE + K VA + P+SVG++A+G    +YS GV  
Sbjct: 234 CKAAKVAKSSPMVVHIDGHQDVPANSEEALAKAVANQ-PVSVGIDASGKAFMFYSEGVFT 292

Query: 446 ------IDLNQRLYGTSI-----PYWIVKNSWGSDWGEK----VEDKVGSSG 482
                 +D    + G  +      YW VKNSWG  WGEK    VE   G+ G
Sbjct: 293 GECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEKGYIRVEKDSGAEG 344



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 95/167 (56%), Gaps = 13/167 (7%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +   KL  L+ ++L+DCD + N GC GG MD+A +YI  NGG+ ++ AYPY+A+   
Sbjct: 174 INAIRTGKLVSLSEQELIDCDTADNDGCEGGLMDNAFEYIKKNGGLTTEAAYPYRAANGT 233

Query: 549 -RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
            +   V +     V +  +  +P   EE + K VA + P+SVG++A+G    +YS GV  
Sbjct: 234 CKAAKVAKSSPMVVHIDGHQDVPANSEEALAKAVANQ-PVSVGIDASGKAFMFYSEGVFT 292

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H + +VGYG  E  DG +  YW VKNSWG  WGEK
Sbjct: 293 GE---CGTEL-DHGVAVVGYGVAE--DGKA--YWTVKNSWGPSWGEK 331



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 10/135 (7%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           RR   F +NV     + +         +N+F D+S ++ +     +  S      P+   
Sbjct: 64  RRFGTFKSNVHFIHSHNKRGDRPYRLRLNRFGDMSQAEFRATFAGSRVSDRRRDGPA--- 120

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
                 T   +  F + ++ +  DLP + DWR +G ++ VK QGKC  CWAFS V  VE 
Sbjct: 121 ------TPPSVPGFMYAAV-NVSDLPRSVDWRQKGAVTGVKNQGKCGSCWAFSTVVSVEG 173

Query: 184 MHAIQGNNLTELSVQ 198
           ++AI+   L  LS Q
Sbjct: 174 INAIRTGKLVSLSEQ 188


>gi|356577813|ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801364 [Glycine max]
          Length = 890

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 155/322 (48%), Gaps = 42/322 (13%)

Query: 172 CWAFSAVGVVEAMHAIQGNNLTELSVQ---HHDKVYSSVEDLLRRHENFVTNVEKAEDYQ 228
           C AF A  V     ++Q  ++ E   Q    + KVY   ++  +R   F  NV   E + 
Sbjct: 564 CMAFLAFQV--TCRSLQDASMYERHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAFN 621

Query: 229 SEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN 288
           +  +      +N+F DL+  +               I P  +  F  +   + +R   F 
Sbjct: 622 NAANKRYKLAINQFADLTNEEF--------------IAP--RNRFKGHMCSSIIRTTTF- 664

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
              +   +P   DWR +G ++ +K+QG+C CCWAFSAV   E +HA+    L  LS Q+L
Sbjct: 665 KYENVTAVPSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQEL 724

Query: 349 VDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           VDCD    + GC GG MDDA +++I N G+ ++  YPYK  + +  C   E     V + 
Sbjct: 725 VDCDTKGVDQGCEGGLMDDAFKFVIQNHGLNTEANYPYKGVDGK--CNANEAANDVVTIT 782

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNANG---LFYYSG------------GVIDLNQR 451
            Y  +P   E+ ++K VA + P+SV ++A+G    FY SG            GV  +   
Sbjct: 783 GYEDVPANNEKALQKAVANQ-PVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYG 841

Query: 452 LYGTSIPYWIVKNSWGSDWGEK 473
           +      YW+VKNSWG++WGE+
Sbjct: 842 VSNDGTEYWLVKNSWGTEWGEE 863



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG MDDA +++I N G+ ++  YPYK  + +  C   
Sbjct: 715 KLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFVIQNHGLNTEANYPYKGVDGK--CNAN 772

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           E     V +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 773 EAANDVVTITGYEDVPANNEKALQKAVANQ-PVSVAIDASGSDFQFYKSGVFTGS---CG 828

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG++WGE+
Sbjct: 829 TEL-DHGVTAVGYGVSN--DGTE--YWLVKNSWGTEWGEE 863



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   ++  +R   F  NV   E +    +      +N+F DL++ +  
Sbjct: 585 RHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAFNNAANKRYKLAINQFADLTNEEF- 643

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +  F  +   + +R   F    +   +P   DWR +G ++ +
Sbjct: 644 -------------IAP--RNRFKGHMCSSIIRTTTF-KYENVTAVPSTVDWRQKGAVTPI 687

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +HA+    L  LS Q
Sbjct: 688 KDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQ 722


>gi|414591545|tpg|DAA42116.1| TPA: hypothetical protein ZEAMMB73_388689 [Zea mays]
          Length = 384

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 140/284 (49%), Gaps = 40/284 (14%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR   F  N     +   +D       +NKF D+               T ++ + +   
Sbjct: 64  RRFNVFKENARYVHEANRKDGRPFRLALNKFADM---------------TTDEFRRTYAG 108

Query: 272 PFSSNQTDTEMRAFQFNSLRHG------DDLPEAFDWRAEGVISKVKEQGKCACCWAFSA 325
             + +       A  F   +HG       +LP A DWR  G ++ VK+QG+C  CWAFSA
Sbjct: 109 SRTRHHRAQLGEARSFAHAQHGRGGSGTTNLPPAVDWRLRGAVTGVKDQGQCGSCWAFSA 168

Query: 326 VGVVEAMHAIQGNSLTELSVQQLVDC-DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPY 384
           +  VE ++ I    L  LS Q+LVDC D+ N GC+GG MD A QYI  NGGV ++  YPY
Sbjct: 169 IAAVEGVNKIMTGKLVSLSEQELVDCDDVDNQGCDGGLMDYAFQYIQRNGGVTTESNYPY 228

Query: 385 KASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYS 442
            A   +R C   +E    V +  Y  +P   E+ ++K VA++ P++V + A+G    +YS
Sbjct: 229 LA--EQRSCNKAKERSHDVTIDGYEDVPANNEDALQKAVASQ-PVAVAIEASGQDFQFYS 285

Query: 443 GGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
            GV       DL+  +    YGT+     YW VKNSWG DWGE+
Sbjct: 286 EGVFTGSCGTDLDHGVAAVGYGTTGDGTKYWTVKNSWGEDWGER 329



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  KL  L+ ++LVDCD + N GC+GG MD A QYI  NGGV ++  YPY A   +R C
Sbjct: 178 IMTGKLVSLSEQELVDCDDVDNQGCDGGLMDYAFQYIQRNGGVTTESNYPYLA--EQRSC 235

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              +E    V +  Y  +P   E+ ++K VA++ P++V + A+G    +YS GV   +  
Sbjct: 236 NKAKERSHDVTIDGYEDVPANNEDALQKAVASQ-PVAVAIEASGQDFQFYSEGVFTGS-- 292

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H +  VGYG     DGT   YW VKNSWG DWGE+
Sbjct: 293 -CGTDL-DHGVAAVGYG--TTGDGTK--YWTVKNSWGEDWGER 329



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 21/141 (14%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           RR   F  N     +  R+D       +NKF D+               T ++ + +   
Sbjct: 64  RRFNVFKENARYVHEANRKDGRPFRLALNKFADM---------------TTDEFRRTYAG 108

Query: 124 PFSSNQTDTEMRAFQFNSLRHG------DDLPEAFDWRAEGVISKVKEQGKCACCWAFSA 177
             + +       A  F   +HG       +LP A DWR  G ++ VK+QG+C  CWAFSA
Sbjct: 109 SRTRHHRAQLGEARSFAHAQHGRGGSGTTNLPPAVDWRLRGAVTGVKDQGQCGSCWAFSA 168

Query: 178 VGVVEAMHAIQGNNLTELSVQ 198
           +  VE ++ I    L  LS Q
Sbjct: 169 IAAVEGVNKIMTGKLVSLSEQ 189


>gi|356539398|ref|XP_003538185.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 156/324 (48%), Gaps = 48/324 (14%)

Query: 177 AVGVVEAMHAIQGNNLT----------ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAED 226
           A+ +V A  A +GN  T          E  +  H KVY+   +  ++++ F  NV++ E 
Sbjct: 14  ALCLVFAFCAFEGNARTLEDAPMRERHEQWMAIHGKVYTHSYEKEQKYQTFKENVQRIEA 73

Query: 227 YQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 286
           +    +     G+N F DL+  + + +                +    S  T T    F+
Sbjct: 74  FNHAGNKPYKLGINHFADLTNEEFKAIN-------------RFKGHVCSKITRTP--TFR 118

Query: 287 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQ 346
           + ++     +P   DWR EG ++ +K+QG+C CCWAFSAV   E +  +    L  LS Q
Sbjct: 119 YENM---TAVPATLDWRQEGAVTPIKDQGQCGCCWAFSAVAATEGITKLSTGKLISLSEQ 175

Query: 347 QLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVK 404
           +LVDCD    + GC GG MDDA ++I+ N G+ ++  YPY+  +    C    E      
Sbjct: 176 ELVDCDTKGVDQGCEGGLMDDAFKFILQNKGLAAEAIYPYEGVDGT--CNAKAEGNHATS 233

Query: 405 VKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL---- 452
           +K Y  +P   E  + K VA + P+SV + A+G    +YSGGV       +L+  +    
Sbjct: 234 IKGYEDVPANSESALLKAVANQ-PVSVAIEASGFEFQFYSGGVFTGSCGTNLDHGVTAVG 292

Query: 453 YGTS---IPYWIVKNSWGSDWGEK 473
           YG S     YW+VKNSWG  WG+K
Sbjct: 293 YGVSDDGTKYWLVKNSWGVKWGDK 316



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD    + GC GG MDDA ++I+ N G+ ++  YPY+  + 
Sbjct: 161 ITKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFILQNKGLAAEAIYPYEGVDG 220

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C    E      +K Y  +P   E  + K VA + P+SV + A+G    +YSGGV  
Sbjct: 221 T--CNAKAEGNHATSIKGYEDVPANSESALLKAVANQ-PVSVAIEASGFEFQFYSGGVFT 277

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +   C     +H +  VGYG  +  DGT   YW+VKNSWG  WG+K
Sbjct: 278 GS---CGTNL-DHGVTAVGYGVSD--DGTK--YWLVKNSWGVKWGDK 316



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  H KVY+   +  ++++ F  NV++ E +    +      +N F DL++ + +
Sbjct: 39  RHEQWMAIHGKVYTHSYEKEQKYQTFKENVQRIEAFNHAGNKPYKLGINHFADLTNEEFK 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            +                +    S  T T    F++ ++     +P   DWR EG ++ +
Sbjct: 99  AIN-------------RFKGHVCSKITRTP--TFRYENM---TAVPATLDWRQEGAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +  +    L  LS Q
Sbjct: 141 KDQGQCGCCWAFSAVAATEGITKLSTGKLISLSEQ 175


>gi|307175778|gb|EFN65613.1| Putative cysteine proteinase CG12163 [Camponotus floridanus]
          Length = 887

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 153/299 (51%), Gaps = 43/299 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  +++ YS+ E+   R   F  N+   +  +  + GTA + VN F D+S  + +     
Sbjct: 586 VVTYNRTYSTPEERNLRLRIFRENLGIIQLLRKTERGTAHYDVNMFADMSPEEFR----- 640

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              S    ++P L++     + D  +R  +   +    +LP  FDWR + V++ VK+QG 
Sbjct: 641 ---SRYLGLRPDLRS-----ENDIPLREAEIPDV----ELPPKFDWREKSVVTPVKDQGM 688

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G +E  +AI+   L  LS Q+LVDCD  + GCNGG  D+A + I   GG+
Sbjct: 689 CGSCWAFSVTGNIEGQYAIKHGRLLSLSEQELVDCDDLDEGCNGGLPDNAYRAIEKLGGL 748

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
             +  YPY+A E+E+ C   +    KV++     I    E +M +W+   GP+S+G+NAN
Sbjct: 749 ELESDYPYEA-ENEK-CHFKKNLA-KVQLASAVNI-TSNETQMAQWLVQNGPISIGINAN 804

Query: 437 GLFYYSGGVIDLNQRL--------------YGTS--------IPYWIVKNSWGSDWGEK 473
            + +Y GGV    + L              YGTS        +PYW +KNSWG  WGE+
Sbjct: 805 AMQFYVGGVSHPFKFLCNPKNLDHGVLIVGYGTSDYPLFHKKLPYWTIKNSWGKRWGEQ 863



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 94/157 (59%), Gaps = 5/157 (3%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCD  + GCNGG  D+A + I   GG+  +  YPY+A E+E+ C   + 
Sbjct: 711 RLLSLSEQELVDCDDLDEGCNGGLPDNAYRAIEKLGGLELESDYPYEA-ENEK-CHFKKN 768

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
              KV++     I    E +M +W+   GP+S+G+NAN + +Y GGV    + LCNPK  
Sbjct: 769 LA-KVQLASAVNI-TSNETQMAQWLVQNGPISIGINANAMQFYVGGVSHPFKFLCNPKNL 826

Query: 617 NHALIIVGYGEEEKKD-GTSIPYWIVKNSWGSDWGEK 652
           +H ++IVGYG  +       +PYW +KNSWG  WGE+
Sbjct: 827 DHGVLIVGYGTSDYPLFHKKLPYWTIKNSWGKRWGEQ 863



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F NF+  +++ YS+ E+   R   F  N+   +  ++ + GTA ++VN F D+S  + + 
Sbjct: 582 FNNFVVTYNRTYSTPEERNLRLRIFRENLGIIQLLRKTERGTAHYDVNMFADMSPEEFR- 640

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                  S    ++P L++     + D  +R  +   +    +LP  FDWR + V++ VK
Sbjct: 641 -------SRYLGLRPDLRS-----ENDIPLREAEIPDV----ELPPKFDWREKSVVTPVK 684

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFS  G +E  +AI+   L  LS Q
Sbjct: 685 DQGMCGSCWAFSVTGNIEGQYAIKHGRLLSLSEQ 718


>gi|67773374|gb|AAY81944.1| cysteine protease 6 [Paragonimus westermani]
          Length = 325

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 159/322 (49%), Gaps = 48/322 (14%)

Query: 172 CWAFSAVGVVEAMHAIQ----GNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDY 227
           C  F  VG V A+  +Q       L E   + + K Y++ +D  +R   F  N+ +A++Y
Sbjct: 8   CLTF-LVGCVFAVSTVQVPDSARELYEQFKRDYGKSYANDDDE-KRFAIFKDNLVRAQNY 65

Query: 228 QSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF 287
           Q ++ GTA +GV +F DL+  +                     A F S++ D ++   Q 
Sbjct: 66  QLQEQGTARYGVTQFSDLTPEEFA-------------------AKFLSSRFDDQVERVQL 106

Query: 288 NSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQ 347
           N L+     PE+ DWR  G ++ V++QG C  CWAFS  G VE    ++   L  LS QQ
Sbjct: 107 NDLKAA---PESVDWRELGAVAPVEDQGSCGSCWAFSVAGNVEGQWFLKTGQLVSLSKQQ 163

Query: 348 LVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
           LVDCD+ + GC+GG        II  GG+ + + YPY     E+ C + +E     K+  
Sbjct: 164 LVDCDVQDSGCDGGYPPTTYGEIIRMGGLEAQRDYPYVG--REQPCKL-DESKLLAKINS 220

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID----------LNQRL----Y 453
            S +    E++   ++A  GP+S G+NA  L +Y  G+            LN  +    Y
Sbjct: 221 -SIVLEANEKKQAAYIAEHGPMSSGINAVTLQFYQSGISHPSKSQCQPDWLNHGVLSVGY 279

Query: 454 GT--SIPYWIVKNSWGSDWGEK 473
           GT   +PYWI+KNSWG+ WGEK
Sbjct: 280 GTEDGVPYWIIKNSWGTGWGEK 301



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 9/156 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCD+ + GC+GG        II  GG+ + + YPY   E  + C + +E
Sbjct: 155 QLVSLSKQQLVDCDVQDSGCDGGYPPTTYGEIIRMGGLEAQRDYPYVGRE--QPCKL-DE 211

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
                K+   S +    E++   ++A  GP+S G+NA  L +Y  G+   ++  C P   
Sbjct: 212 SKLLAKINS-SIVLEANEKKQAAYIAEHGPMSSGINAVTLQFYQSGISHPSKSQCQPDWL 270

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           NH ++ VGYG E+      +PYWI+KNSWG+ WGEK
Sbjct: 271 NHGVLSVGYGTED-----GVPYWIIKNSWGTGWGEK 301



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 23/155 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           +  F RD+ K Y++ +D  +R   F  N+ +A++YQ ++ GTA + V +F DL+  +   
Sbjct: 32  YEQFKRDYGKSYANDDDE-KRFAIFKDNLVRAQNYQLQEQGTARYGVTQFSDLTPEEFA- 89

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                             A F S++ D ++   Q N L+     PE+ DWR  G ++ V+
Sbjct: 90  ------------------AKFLSSRFDDQVERVQLNDLKAA---PESVDWRELGAVAPVE 128

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +QG C  CWAFS  G VE    ++   L  LS Q 
Sbjct: 129 DQGSCGSCWAFSVAGNVEGQWFLKTGQLVSLSKQQ 163


>gi|224076972|ref|XP_002305074.1| predicted protein [Populus trichocarpa]
 gi|224106329|ref|XP_002333698.1| predicted protein [Populus trichocarpa]
 gi|222837984|gb|EEE76349.1| predicted protein [Populus trichocarpa]
 gi|222848038|gb|EEE85585.1| predicted protein [Populus trichocarpa]
          Length = 307

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 144/293 (49%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H +VY  +++  +R+  F  N+E+ E + +        GVNKF DL+  + +     
Sbjct: 9   MAQHGRVYGDMKEKEKRYLIFKENIERIEAFNNGSDRGYKLGVNKFADLTNEEFR----- 63

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                      ++   +    +     +F+  +L     +P + DWR  G ++ VK+QG 
Sbjct: 64  -----------AMHHGYKRQSSKLMSSSFRHENL---SAIPTSMDWRKAGAVTPVKDQGT 109

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV  +E +  ++   L  LS QQLVDCD+   + GC GG MD+A Q+I+ NG
Sbjct: 110 CGCCWAFSAVAAIEGIIKLKTGKLISLSEQQLVDCDVKGVDQGCGGGLMDNAFQFILRNG 169

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ S+  YPY+  +    C   +    + K+  Y  +P   E  + + VA + P+SV + 
Sbjct: 170 GLTSEATYPYQGVDGT--CKSKKTASIEAKITGYEDVPVNNENALLQAVAKQ-PVSVAVE 226

Query: 435 ANG--LFYYSGGVI--DLNQRL--------YGTS---IPYWIVKNSWGSDWGE 472
             G    +Y  GV   D    L        YGT+     YW+VKNSWG+ WGE
Sbjct: 227 GGGYDFQFYKSGVFKGDCGTYLDHAVTAIGYGTNSDGTNYWLVKNSWGTSWGE 279



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 19/161 (11%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MD+A Q+I+ NGG+ S+  YPY+  +    C   
Sbjct: 132 KLISLSEQQLVDCDVKGVDQGCGGGLMDNAFQFILRNGGLTSEATYPYQGVDGT--CKSK 189

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI--DLNQRL 610
           +    + K+  Y  +P   E  + + VA + P+SV +   G    +Y  GV   D    L
Sbjct: 190 KTASIEAKITGYEDVPVNNENALLQAVAKQ-PVSVAVEGGGYDFQFYKSGVFKGDCGTYL 248

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                 +HA+  +GYG     DGT+  YW+VKNSWG+ WGE
Sbjct: 249 ------DHAVTAIGYGTNS--DGTN--YWLVKNSWGTSWGE 279



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 19/158 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           + R   +M  H +VY  +++  +R+  F  N+E+ E +           VNKF DL++ +
Sbjct: 2   LKRHEEWMAQHGRVYGDMKEKEKRYLIFKENIERIEAFNNGSDRGYKLGVNKFADLTNEE 61

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +                ++   +    +     +F+  +L     +P + DWR  G ++
Sbjct: 62  FR----------------AMHHGYKRQSSKLMSSSFRHENL---SAIPTSMDWRKAGAVT 102

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            VK+QG C CCWAFSAV  +E +  ++   L  LS Q 
Sbjct: 103 PVKDQGTCGCCWAFSAVAAIEGIIKLKTGKLISLSEQQ 140


>gi|57118005|gb|AAW34134.1| cysteine protease gp2a [Zingiber officinale]
          Length = 381

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/277 (35%), Positives = 139/277 (50%), Gaps = 36/277 (12%)

Query: 213 RHENFVTNVEKAEDYQSE-DSG--TAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSL 269
           R E F  N++  +++ +  D G  T + G+N+F DL               T E+ +   
Sbjct: 73  RLEVFKENLQFVDEHNAAADRGEHTFLLGMNRFADL---------------TNEEYRTRF 117

Query: 270 QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 329
              FS  +     +      LR GDDLP++ DWR  G +  VK QG C  CWAFS V  V
Sbjct: 118 LRDFSRLRRSASGKISSRYRLREGDDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAV 177

Query: 330 EAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 389
           E ++ I    L  LS QQLVDC  +N GC GG M+ A Q+I++NGG+ S++ YPY+    
Sbjct: 178 EGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETYPYRG--- 234

Query: 390 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGV-- 445
           + G          V +  Y  +P   E+ ++K VA + P+SV M+A G  +  Y  G+  
Sbjct: 235 QNGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQ-PVSVTMDAAGRDFQLYRSGIFT 293

Query: 446 ----IDLNQRL----YGTS--IPYWIVKNSWGSDWGE 472
               I  N  L    YGT     +WIVKNSWG +WGE
Sbjct: 294 GSCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGE 330



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 92/161 (57%), Gaps = 15/161 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           ++   L  L+ ++LVDC  +N GC GG M+ A Q+I++NGG+ S++ YPY+    + G  
Sbjct: 183 IVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETYPYRG---QNGIC 239

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRL 610
                   V +  Y  +P   E+ ++K VA + P+SV M+A G  +  Y  G+   +   
Sbjct: 240 NSTVNAPVVSIDSYENVPSHNEQSLQKAVANQ-PVSVTMDAAGRDFQLYRSGIFTGS--- 295

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           CN  A NHAL +VGYG E  KD     +WIVKNSWG +WGE
Sbjct: 296 CNISA-NHALTVVGYGTENDKD-----FWIVKNSWGKNWGE 330



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 2/97 (2%)

Query: 105 LTGLN--LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           L G+N   D T E+ +      FS  +     +      LR GDDLP++ DWR  G +  
Sbjct: 99  LLGMNRFADLTNEEYRTRFLRDFSRLRRSASGKISSRYRLREGDDLPDSIDWRENGAVVP 158

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK QG C  CWAFS V  VE ++ I   +L  LS Q 
Sbjct: 159 VKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQ 195


>gi|37780047|gb|AAP32196.1| cysteine protease 8 [Trifolium repens]
          Length = 343

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 142/294 (48%), Gaps = 37/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + K+Y   ++   R + F  NV   E   ++D+ +   G+N+F DL+  +       
Sbjct: 43  MSQYGKIYKDHQERETRFKIFTENVNYVEASNADDTKSYKLGINQFADLTNEEF------ 96

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                      + +  F  +   +  R   F    +   +P   DWR +G ++ VK QG+
Sbjct: 97  ----------VASRNKFKGHMCSSITRTTTFK-YENVSAIPSTVDWRKKGAVTPVKNQGQ 145

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV   E +H +    L  LS Q+LVDCD    + GC GG MDDA ++II N 
Sbjct: 146 CGCCWAFSAVAATEGIHKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNH 205

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPY+  +    C   +     V +  Y  +P   E+ ++K VA + P+SV ++
Sbjct: 206 GLSTEAQYPYEGVDGT--CNANKASVQAVTITGYEDVPANSEQALQKAVANQ-PISVAID 262

Query: 435 ANG---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           A+G    FY SG            GV  +   +      YW+VKNSWG+DWGE+
Sbjct: 263 ASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSNDGTKYWLVKNSWGTDWGEE 316



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG MDDA ++II N G+ ++  YPY+  +    C   
Sbjct: 168 KLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLSTEAQYPYEGVDGT--CNAN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +     V +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 226 KASVQAVTITGYEDVPANSEQALQKAVANQ-PISVAIDASGSDFQFYKSGVFTGS---CG 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG+DWGE+
Sbjct: 282 TEL-DHGVTAVGYG--VSNDGT--KYWLVKNSWGTDWGEE 316



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + K+Y   ++   R + F  NV   E    +D+ +    +N+F DL++ +  
Sbjct: 38  RHGQWMSQYGKIYKDHQERETRFKIFTENVNYVEASNADDTKSYKLGINQFADLTNEEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                           + +  F  +   +  R   F    +   +P   DWR +G ++ V
Sbjct: 97  ---------------VASRNKFKGHMCSSITRTTTFK-YENVSAIPSTVDWRKKGAVTPV 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG+C CCWAFSAV   E +H +    L  LS Q
Sbjct: 141 KNQGQCGCCWAFSAVAATEGIHKLSTGKLISLSEQ 175


>gi|317106666|dbj|BAJ53169.1| JHL18I08.3 [Jatropha curcas]
          Length = 441

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 157/296 (53%), Gaps = 33/296 (11%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           +L E   Q H K Y+S E+ L R + F  N +   ++ S+ + +    +N F DL+  + 
Sbjct: 28  HLFETWCQQHGKTYASQEEKLFRLKVFQDNYDFVTEHNSQGNSSYTLSLNAFADLTHHEF 87

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +  + L L S       +  A  + ++++ ++  F         D+P + DWR  G +++
Sbjct: 88  KA-SRLGLSS-------AASASLNVDRSNRQIPDFV-------ADVPASVDWRKNGAVTQ 132

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK+QG C  CW+FSA G +E ++ I   SL  LS Q+LVDCD S N GC GG MD A Q+
Sbjct: 133 VKDQGNCGACWSFSATGAIEGINKIVTGSLVSLSEQELVDCDKSYNNGCEGGIMDYAFQF 192

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           +IDN G+ +++ YPY+    +R C   + +   V +  Y  +P   E+E+ K VA + P+
Sbjct: 193 VIDNHGIDTEEDYPYQG--RDRSCNKEKLKRHVVTIDGYVDVPQNNEKELLKAVANQ-PV 249

Query: 430 SVGMNAN--GLFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWG 471
           SVG+  +      YS G+        L+  +    YG+   + YWIVKNSWGS WG
Sbjct: 250 SVGICGSERAFQLYSKGIFTGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGSYWG 305



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 15/164 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GC GG MD A Q++IDN G+ +++ YPY+    +
Sbjct: 154 INKIVTGSLVSLSEQELVDCDKSYNNGCEGGIMDYAFQFVIDNHGIDTEEDYPYQG--RD 211

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDL 606
           R C   + +   V +  Y  +P   E+E+ K VA + P+SVG+  +      YS G+   
Sbjct: 212 RSCNKEKLKRHVVTIDGYVDVPQNNEKELLKAVANQ-PVSVGICGSERAFQLYSKGIF-- 268

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
               C+  + +HA++IVGYG E   D     YWIVKNSWGS WG
Sbjct: 269 -TGPCST-SLDHAVLIVGYGSENGVD-----YWIVKNSWGSYWG 305



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  + + H K Y+S E+ L R + F  N +   ++  + + +    +N F DL+  + + 
Sbjct: 30  FETWCQQHGKTYASQEEKLFRLKVFQDNYDFVTEHNSQGNSSYTLSLNAFADLTHHEFKA 89

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            + L L S       +  A  + ++++ ++  F         D+P + DWR  G +++VK
Sbjct: 90  -SRLGLSS-------AASASLNVDRSNRQIPDFV-------ADVPASVDWRKNGAVTQVK 134

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CW+FSA G +E ++ I   +L  LS Q
Sbjct: 135 DQGNCGACWSFSATGAIEGINKIVTGSLVSLSEQ 168


>gi|394331822|gb|AFN27130.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 174/375 (46%), Gaps = 47/375 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPYAVDWRKKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ LT LS QQLV CD  + GC GG M  A ++++   NG + 
Sbjct: 150 CWAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDSGCGGGLMLQAFEWLLRNMNGTMF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +S      C    +     ++  Y  I    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIE-SSETVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGV------IDLNQRL----YGTS--IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV      I LN  +    Y  +  +PYW++KNSWG DWGE   V   +G + 
Sbjct: 269 SFMSYESGVLTSCAGITLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGENGYVRVTMGVNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM-SNGGCNGGRMDDALQYI 528
               +  ++  +P  L+             R+  E+++  DM    GC    +   + + 
Sbjct: 329 CLLTEYPVSAHVPQSLAPGPSTESEERAPKRVMVEQIICTDMYCREGCRKTLLTANVCHP 388

Query: 529 IDNGGVVSDQAYPYK 543
              GG    +  P K
Sbjct: 389 NGGGGSSMTKCSPPK 403



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L+ L+ ++LV CD  + GC GG M  A ++++ N  G + ++ +YPY +S      C  
Sbjct: 169 RLTALSEQQLVSCDDKDSGCGGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             +     ++  Y  I    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSQLVPGARIDGYMTIE-SSETVMAAWLAKNGPISIAVDASSFMSYESGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              NH +++VGY    +     +PYW++KNSWG DWGE
Sbjct: 284 ITLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGE 316



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPYAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ LT LS Q 
Sbjct: 134 KKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSEQQ 177


>gi|409190991|gb|AFV30165.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 155/325 (47%), Gaps = 46/325 (14%)

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQ---HHDKVYSSVEDLLRRHENFVTNVEKAE 225
           C   WAF       +   +Q  ++ E   Q    + +VY  +++  +R   F  NV   E
Sbjct: 17  CLGLWAFQV-----SSRTLQDASMQERHEQWMARYGRVYKDLQEKEKRFSIFKENVNYIE 71

Query: 226 DYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAF 285
              +        GVN+F DL+  +                +   +   SS+ T T    F
Sbjct: 72  ASNNAGDKPYKLGVNQFADLTNEEFIA------------TRNKFKGHMSSSITRT--TTF 117

Query: 286 QFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSV 345
           ++ ++      P   DWR EG ++ VK QG C CCWAFSAV   E +H +   +L  LS 
Sbjct: 118 KYENVT----APSTVDWRQEGAVTPVKNQGTCGCCWAFSAVAATEGIHKLSTGNLVSLSE 173

Query: 346 QQLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKV 403
           Q+LVDCD S    GC GG MDDA ++II NGG+ ++  YPY+  +    C   EE     
Sbjct: 174 QELVDCDTSGADQGCQGGLMDDAFKFIIQNGGLNTEAQYPYQGVDGT--CNTNEEATHVA 231

Query: 404 KVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVI------DLNQRL--- 452
            +  Y  +P   E+ +++ VA + P+S+ ++A+G  +  Y  GV        L+  +   
Sbjct: 232 TITGYEDVPSNNEQALQQAVANQ-PISIAIDASGSDFQNYQSGVFTGSCGTQLDHGVAVV 290

Query: 453 -YGTS---IPYWIVKNSWGSDWGEK 473
            YG S     YW+VKNSWG+DWGE+
Sbjct: 291 GYGVSDDGTKYWLVKNSWGADWGEE 315



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 15/159 (9%)

Query: 498 LSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ ++LVDCD S    GC GG MDDA ++II NGG+ ++  YPY+  +    C   E
Sbjct: 168 LVSLSEQELVDCDTSGADQGCQGGLMDDAFKFIIQNGGLNTEAQYPYQGVDGT--CNTNE 225

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNP 613
           E      +  Y  +P   E+ +++ VA + P+S+ ++A+G  +  Y  GV   +   C  
Sbjct: 226 EATHVATITGYEDVPSNNEQALQQAVANQ-PISIAIDASGSDFQNYQSGVFTGS---CGT 281

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  +H + +VGYG  +  DGT   YW+VKNSWG+DWGE+
Sbjct: 282 QL-DHGVAVVGYGVSD--DGTK--YWLVKNSWGADWGEE 315



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + +VY  +++  +R   F  NV   E             VN+F DL++ +  
Sbjct: 38  RHEQWMARYGRVYKDLQEKEKRFSIFKENVNYIEASNNAGDKPYKLGVNQFADLTNEEFI 97

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                         +   +   SS+ T T    F++ ++      P   DWR EG ++ V
Sbjct: 98  A------------TRNKFKGHMSSSITRT--TTFKYENVT----APSTVDWRQEGAVTPV 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C CCWAFSAV   E +H +   NL  LS Q
Sbjct: 140 KNQGTCGCCWAFSAVAATEGIHKLSTGNLVSLSEQ 174


>gi|356577811|ref|XP_003557016.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 155/322 (48%), Gaps = 42/322 (13%)

Query: 172 CWAFSAVGVVEAMHAIQGNNLTELSVQ---HHDKVYSSVEDLLRRHENFVTNVEKAEDYQ 228
           C AF A  V     ++Q  ++ E   Q    + KVY   ++  +R   F  NV   E + 
Sbjct: 17  CMAFLAFQVT--CRSLQDASMYERHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAFN 74

Query: 229 SEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN 288
           +  +      +N+F DL+  +               I P  +  F  +   + +R   F 
Sbjct: 75  NAANKRYKLAINQFADLTNEEF--------------IAP--RNRFKGHMCSSIIRTTTF- 117

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
              +   +P   DWR +G ++ +K+QG+C CCWAFSAV   E +HA+    L  LS Q+L
Sbjct: 118 KYENVTAVPSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQEL 177

Query: 349 VDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           VDCD    + GC GG MDDA +++I N G+ ++  YPYK  + +  C V E       + 
Sbjct: 178 VDCDTKGVDQGCEGGLMDDAFKFVIQNHGLNTEANYPYKGVDGK--CNVNEAANDAATIT 235

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNANG---LFYYSG------------GVIDLNQR 451
            Y  +P   E+ ++K VA + P+SV ++A+G    FY SG            GV  +   
Sbjct: 236 GYEDVPANNEKALQKAVANQ-PVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYG 294

Query: 452 LYGTSIPYWIVKNSWGSDWGEK 473
           +      YW+VKNSWG++WGE+
Sbjct: 295 VSNDGTEYWLVKNSWGTEWGEE 316



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  +   KL  L+ ++LVDCD    + GC GG MDDA +++I N G+ ++  YPYK  + 
Sbjct: 161 IHALTSGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFVIQNHGLNTEANYPYKGVDG 220

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
           +  C V E       +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV  
Sbjct: 221 K--CNVNEAANDAATITGYEDVPANNEKALQKAVANQ-PVSVAIDASGSDFQFYKSGVFT 277

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +   C  +  +H +  VGYG     DGT   YW+VKNSWG++WGE+
Sbjct: 278 GS---CGTEL-DHGVTAVGYG--VSNDGTE--YWLVKNSWGTEWGEE 316



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   ++  +R   F  NV   E +    +      +N+F DL++ +  
Sbjct: 38  RHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAFNNAANKRYKLAINQFADLTNEEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +  F  +   + +R   F    +   +P   DWR +G ++ +
Sbjct: 97  -------------IAP--RNRFKGHMCSSIIRTTTF-KYENVTAVPSTVDWRQKGAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +HA+    L  LS Q
Sbjct: 141 KDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQ 175


>gi|157093728|gb|ABV22590.1| KDEL-tailed cysteine endopeptidase [Solanum lycopersicum]
          Length = 360

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 156/290 (53%), Gaps = 33/290 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H  V  S+++  +R   F  NV    ++  +D    +  +NKF D++  + +Q       
Sbjct: 44  HHTVSRSLDEKHKRFNVFKANVHYVHNFNKKDKPYKL-KLNKFADMTNHEFRQHYA---G 99

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S ++  +  L A   S    T M A +       D++P + DWR +G ++ VK+QG+C  
Sbjct: 100 SKIKHHRTLLGA---SRANGTFMYANE-------DNVPPSIDWRKKGAVTPVKDQGQCGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS V  VE ++ I+   L  LS Q+LVDCD + N GCNGG MD A  +I   GG+ +
Sbjct: 150 CWAFSTVVAVEGINQIKTKKLVSLSEQELVDCDTTENQGCNGGLMDPAFDFIKKRGGITT 209

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG- 437
           ++ YPYKA + +  C + +     V +  +  +P  +E+ + K VA + P+SV ++A+G 
Sbjct: 210 EERYPYKAEDDK--CDIQKRNTPVVSIDGHEDVPPNDEDALLKAVANQ-PISVAIDASGS 266

Query: 438 -LFYYSGGVI------DLNQRL----YGTSI---PYWIVKNSWGSDWGEK 473
              +YS GV       +L+  +    YGT++    YWIVKNSWG+ WGEK
Sbjct: 267 QFQFYSEGVFTGECGTELDHGVAIVGYGTTVDGTKYWIVKNSWGAGWGEK 316



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 93/159 (58%), Gaps = 14/159 (8%)

Query: 497 KLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           KL  L+ ++LVDCD + N GCNGG MD A  +I   GG+ +++ YPYKA + +  C + +
Sbjct: 169 KLVSLSEQELVDCDTTENQGCNGGLMDPAFDFIKKRGGITTEERYPYKAEDDK--CDIQK 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCNP 613
                V +  +  +P  +E+ + K VA + P+SV ++A+G    +YS GV       C  
Sbjct: 227 RNTPVVSIDGHEDVPPNDEDALLKAVANQ-PISVAIDASGSQFQFYSEGVFTGE---CGT 282

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  +H + IVGYG     DGT   YWIVKNSWG+ WGEK
Sbjct: 283 EL-DHGVAIVGYG--TTVDGTK--YWIVKNSWGAGWGEK 316



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  S+++  +R   F  NV    ++ ++D    + ++NKF D+++ + +Q     
Sbjct: 42  RSHHTVSRSLDEKHKRFNVFKANVHYVHNFNKKDKPYKL-KLNKFADMTNHEFRQHYA-- 98

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             S ++  +  L A   S    T M A +       D++P + DWR +G ++ VK+QG+C
Sbjct: 99  -GSKIKHHRTLLGA---SRANGTFMYANE-------DNVPPSIDWRKKGAVTPVKDQGQC 147

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+   L  LS Q
Sbjct: 148 GSCWAFSTVVAVEGINQIKTKKLVSLSEQ 176


>gi|394331814|gb|AFN27126.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 175/375 (46%), Gaps = 47/375 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPYAVDWRKKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ LT LS QQLV CD  + GC GG M  A ++++   NG + 
Sbjct: 150 CWAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDSGCGGGLMLQAFEWLLRNMNGTMF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +S      C    +     ++  Y  I    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIE-SSETVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGE   V   +G + 
Sbjct: 269 SFMSYESGVLTSCAGDTLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGENGYVRVTMGVNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM-SNGGCNGGRMDDALQYI 528
               +  ++  +P  L+             R+  E+++  DM    GC    +   + + 
Sbjct: 329 CLLTEYPVSAHVPQSLAPGPSTESEERAPKRVMVEQIICTDMCCREGCRKTLLTANVCHP 388

Query: 529 IDNGGVVSDQAYPYK 543
            + GG    +  P K
Sbjct: 389 NEGGGSSMTKCSPPK 403



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L+ L+ ++LV CD  + GC GG M  A ++++ N  G + ++ +YPY +S      C  
Sbjct: 169 RLTALSEQQLVSCDDKDSGCGGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             +     ++  Y  I    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSQLVPGARIDGYMTIE-SSETVMAAWLAKNGPISIAVDASSFMSYESGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              NH +++VGY    +     +PYW++KNSWG DWGE
Sbjct: 284 DTLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGE 316



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPYAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ LT LS Q 
Sbjct: 134 KKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSEQQ 177


>gi|146215996|gb|ABQ10200.1| cysteine protease Cp2 [Actinidia deliciosa]
          Length = 376

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 157/298 (52%), Gaps = 52/298 (17%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+ + +  RR E F  N++  +++ SE+    V G+N+F DL+  + + +      
Sbjct: 54  HGKAYNGIGERERRFEIFKDNLKFVDEHNSENRSYKV-GLNRFADLTNEEYRSM------ 106

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNS------LRHGDDLPEAFDWRAEGVISKVKE 313
                        F   +TD++ R  +  S      ++  D LPE+ DWR  G ++ +K+
Sbjct: 107 -------------FLGTKTDSKRRFMKSKSASRRYAVQDSDMLPESVDWRESGAVAPIKD 153

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIID 372
           QG C  CWAFS V  VE ++ I    + +LS Q+LVDCD + + GCNGG MD A ++II+
Sbjct: 154 QGSCGSCWAFSTVAAVEGVNQIATGEMIQLSEQELVDCDRTYDAGCNGGLMDYAFEFIIN 213

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           NGG+ +++ YPY+  +   G    E +  K V + +Y  +P  +E  +KK VA + P+SV
Sbjct: 214 NGGIDTEEDYPYRGVD---GTCDPERKNTKVVSINDYEDVPPYDEMALKKAVAHQ-PVSV 269

Query: 432 GMNANGL---FYYSG------------GVIDLNQRLYGT--SIPYWIVKNSWGSDWGE 472
            + A+G     Y SG            GV+ +    YGT     +WIV+NSWG+ WGE
Sbjct: 270 AIEASGRAFQLYLSGVFTGECGRALDHGVVVVG---YGTDNGADHWIVRNSWGTSWGE 324



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 97/163 (59%), Gaps = 17/163 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   ++ +L+ ++LVDCD + + GCNGG MD A ++II+NGG+ +++ YPY+  +   G 
Sbjct: 175 IATGEMIQLSEQELVDCDRTYDAGCNGGLMDYAFEFIINNGGIDTEEDYPYRGVD---GT 231

Query: 552 LVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQ 608
              E +  K V + +Y  +P  +E  +KK VA + P+SV + A+G  +  Y  GV     
Sbjct: 232 CDPERKNTKVVSINDYEDVPPYDEMALKKAVAHQ-PVSVAIEASGRAFQLYLSGVFTGE- 289

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C  +A +H +++VGYG +   D     +WIV+NSWG+ WGE
Sbjct: 290 --CG-RALDHGVVVVGYGTDNGAD-----HWIVRNSWGTSWGE 324



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 43/232 (18%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           +  ++  H K Y+ + +  RR E F  N++  +++  E+    V  +N+F DL++ + + 
Sbjct: 47  YAEWLAKHGKAYNGIGERERRFEIFKDNLKFVDEHNSENRSYKV-GLNRFADLTNEEYRS 105

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS------LRHGDDLPEAFDWRAEG 158
           +                   F   +TD++ R  +  S      ++  D LPE+ DWR  G
Sbjct: 106 M-------------------FLGTKTDSKRRFMKSKSASRRYAVQDSDMLPESVDWRESG 146

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH---HDKVYSSVED--LLRR 213
            ++ +K+QG C  CWAFS V  VE ++ I    + +LS Q     D+ Y +  +  L+  
Sbjct: 147 AVAPIKDQGSCGSCWAFSTVAAVEGVNQIATGEMIQLSEQELVDCDRTYDAGCNGGLMDY 206

Query: 214 HENFVTN---VEKAEDY---------QSEDSGTAVFGVNKFFDLSESDLQQL 253
              F+ N   ++  EDY           E   T V  +N + D+   D   L
Sbjct: 207 AFEFIINNGGIDTEEDYPYRGVDGTCDPERKNTKVVSINDYEDVPPYDEMAL 258


>gi|47524507|gb|AAT34987.1| putative cysteine protease [Gossypium hirsutum]
          Length = 344

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 148/295 (50%), Gaps = 38/295 (12%)

Query: 197 VQHHDKVYSSVED--LLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLT 254
           +  H +VY+  ++    +R   F  NVE+ E++   D  T    +N+F DL+  + +   
Sbjct: 41  MSQHGRVYADEQEDHKNKRFNVFKENVERIEEFN--DGKTFKLAINQFADLTNEEFRASY 98

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
                          + P   +   T+   F++ ++     LP + DWR +G ++ VK Q
Sbjct: 99  N------------GFKGPMVLSSQITKPTPFRYENVSSA--LPVSVDWRKKGAVTPVKNQ 144

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIID 372
           G+C CCWAFSAV  +E +  I    L  LS Q+LVDCD    + GC GG MD A ++II+
Sbjct: 145 GQCGCCWAFSAVAAIEGITQISTGKLISLSEQELVDCDTKGIDHGCEGGLMDTAFEFIIN 204

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ ++  YPYK  +    C   +     V +  Y  +P  +E+ + K VA + P+SV 
Sbjct: 205 NGGLTTESNYPYKGEDGT--CNFNKTNPIAVSITGYEDVPANDEQALMKAVAHQ-PVSVA 261

Query: 433 MNANG--LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           + A G    +YS GV       +L+  +    YG S     YWIVKNSWG+ WGE
Sbjct: 262 IEAGGSDFQFYSSGVFTGECGTELDHAVTAVGYGESEDGSKYWIVKNSWGTKWGE 316



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD    + GC GG MD A ++II+NGG+ ++  YPYK  + 
Sbjct: 162 ITQISTGKLISLSEQELVDCDTKGIDHGCEGGLMDTAFEFIINNGGLTTESNYPYKGEDG 221

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C   +     V +  Y  +P  +E+ + K VA + P+SV + A G    +YS GV  
Sbjct: 222 T--CNFNKTNPIAVSITGYEDVPANDEQALMKAVAHQ-PVSVAIEAGGSDFQFYSSGVFT 278

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                C  +  +HA+  VGYGE E  DG+   YWIVKNSWG+ WGE
Sbjct: 279 GE---CGTEL-DHAVTAVGYGESE--DGSK--YWIVKNSWGTKWGE 316



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 25/193 (12%)

Query: 14  LGYLHTFMIKVALLESNIFQ------TRGYLNSPVTRFLNFMRDHDKVYSSVED--LLRR 65
           +  L  F+  VAL+ S  F       +R  L+    R   +M  H +VY+  ++    +R
Sbjct: 1   MALLQIFLF-VALVLSFCFSIQLAGLSRPLLDEDSMRHEEWMSQHGRVYADEQEDHKNKR 59

Query: 66  HENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPF 125
              F  NVE+ E++   D  T    +N+F DL++ + +                  + P 
Sbjct: 60  FNVFKENVERIEEFN--DGKTFKLAINQFADLTNEEFRASYN------------GFKGPM 105

Query: 126 SSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMH 185
             +   T+   F++ ++     LP + DWR +G ++ VK QG+C CCWAFSAV  +E + 
Sbjct: 106 VLSSQITKPTPFRYENVSSA--LPVSVDWRKKGAVTPVKNQGQCGCCWAFSAVAAIEGIT 163

Query: 186 AIQGNNLTELSVQ 198
            I    L  LS Q
Sbjct: 164 QISTGKLISLSEQ 176


>gi|297745594|emb|CBI40759.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 149/290 (51%), Gaps = 38/290 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           H K Y S E+ L R E F  N++  ++   + S +   G+N+F DLS  + + +  GL +
Sbjct: 4   HGKSYRSFEEKLHRFEVFQDNLKHIDETNKKVS-SYWLGLNEFADLSHEEFKRKYLGLKI 62

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
           +       P                 F +  +    DLP++ DWR +G ++ VK QG C 
Sbjct: 63  ELPKRRDSP---------------EEFSYKDVA---DLPKSVDWRKKGAVAHVKNQGACG 104

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVV 377
            CWAFS V  VE ++ I   +LT LS Q+L+DCD   N GCNGG MD A  +II NGG+ 
Sbjct: 105 SCWAFSTVAAVEGINQIVTGNLTALSEQELIDCDKPFNNGCNGGLMDYAFAFIISNGGLR 164

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN- 436
            ++ YPY   E    C   +EE   V +  Y  +P   E+   K +A + PLSV + A+ 
Sbjct: 165 KEEDYPYVMEEGT--CGEKKEELEVVTISGYHDVPEDNEQSFLKALANQ-PLSVAIEASS 221

Query: 437 -GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
            G  +YSGG+       +L+  +    YGTS  + Y  VKNSWGS WGEK
Sbjct: 222 RGFQFYSGGIFNGHCGTELDHGVAAVGYGTSKGVDYITVKNSWGSKWGEK 271



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD   N GCNGG MD A  +II NGG+  ++ YPY   E    C
Sbjct: 121 IVTGNLTALSEQELIDCDKPFNNGCNGGLMDYAFAFIISNGGLRKEEDYPYVMEEGT--C 178

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQR 609
              +EE   V +  Y  +P   E+   K +A + PLSV + A+  G  +YSGG+ + +  
Sbjct: 179 GEKKEELEVVTISGYHDVPEDNEQSFLKALANQ-PLSVAIEASSRGFQFYSGGIFNGH-- 235

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG  +  D     Y  VKNSWGS WGEK
Sbjct: 236 -CGTEL-DHGVAAVGYGTSKGVD-----YITVKNSWGSKWGEK 271



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 20/151 (13%)

Query: 49  MRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTG 107
           M  H K Y S E+ L R E F  N++  ++  ++ S +    +N+F DLS  + + +  G
Sbjct: 1   MSKHGKSYRSFEEKLHRFEVFQDNLKHIDETNKKVS-SYWLGLNEFADLSHEEFKRKYLG 59

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           L ++       P                 F +  +    DLP++ DWR +G ++ VK QG
Sbjct: 60  LKIELPKRRDSP---------------EEFSYKDVA---DLPKSVDWRKKGAVAHVKNQG 101

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 102 ACGSCWAFSTVAAVEGINQIVTGNLTALSEQ 132


>gi|226477902|emb|CAX72658.1| Cathepsin L precursor [Schistosoma japonicum]
 gi|226488903|emb|CAX74801.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 142/298 (47%), Gaps = 46/298 (15%)

Query: 202 KVYSSVEDLLRRH----ENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           + Y +V +  +R      NF+  +E    YQ E   T   GVN F D +E +L++L G  
Sbjct: 71  RAYGNVMEETKRFLIFGTNFIKMMEHNRAYQ-EGKATYKMGVNNFTDKTEYELRKLRGYR 129

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             S     +P               +   F S  H   LP+  DWR  G ++ VK QG+C
Sbjct: 130 --SACRIAKP---------------KGSTFISSEHAK-LPDRVDWRRNGAVTPVKNQGQC 171

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGG 375
             CWAFS+ G +E  H  + N L  LS QQL+DC  S  N GC GG MD A QY+ DN G
Sbjct: 172 GSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRDNEG 231

Query: 376 VVSDQAYPYKASESERG--CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           + S+ +YPY + + +    CL         +V  Y  I  G+E  +   VAT GP+SV +
Sbjct: 232 IDSEISYPYISGDGDENVRCLF-NSTNIMAQVTGYINIHEGDERALMNAVATIGPVSVAI 290

Query: 434 NA--NGLFYYSGGV------------IDLNQRLYGTSI----PYWIVKNSWGSDWGEK 473
           NA  +    Y  G+            +D    L G  I    PYW++KNSWG DWG+K
Sbjct: 291 NAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDK 348



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 90/163 (55%), Gaps = 12/163 (7%)

Query: 496 SKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG--C 551
           ++L  L+ ++L+DC  S  N GC GG MD A QY+ DN G+ S+ +YPY + + +    C
Sbjct: 192 NRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRDNEGIDSEISYPYISGDGDENVRC 251

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQR 609
           L         +V  Y  I  G+E  +   VAT GP+SV +NA  +    Y  G+    + 
Sbjct: 252 LF-NSTNIMAQVTGYINIHEGDERALMNAVATIGPVSVAINAGLSSFSMYKSGIYSDPEC 310

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               +  +H +++VGYG E+ K     PYW++KNSWG DWG+K
Sbjct: 311 ASASEDLDHGVLLVGYGIEDGK-----PYWLIKNSWGEDWGDK 348



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 19/154 (12%)

Query: 46  LNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL 105
           +NF R +  V    +  L    NF+  +E    YQ E   T    VN F D ++ +L++L
Sbjct: 67  INFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQ-EGKATYKMGVNNFTDKTEYELRKL 125

Query: 106 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 165
            G    S     +P               +   F S  H   LP+  DWR  G ++ VK 
Sbjct: 126 RGYR--SACRIAKP---------------KGSTFISSEHAK-LPDRVDWRRNGAVTPVKN 167

Query: 166 QGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           QG+C  CWAFS+ G +E  H  + N L  LS Q 
Sbjct: 168 QGQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQ 201


>gi|125547256|gb|EAY93078.1| hypothetical protein OsI_14879 [Oryza sativa Indica Group]
          Length = 339

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 158/314 (50%), Gaps = 53/314 (16%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF--GVNKFFDLSESDLQQLT 254
           ++ + +VY    +  RR E F  NV   E +   ++G   F  GVN+F DL+  + +   
Sbjct: 41  MEQYGRVYKDATEKARRFEIFKANVAFIESF---NAGNHKFWLGVNQFADLTNYEFRAT- 96

Query: 255 GLNLDSTLEDIQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                 T +   PS ++ P +          F++ ++   D LP   DWR +G ++ +K+
Sbjct: 97  -----KTNKGFIPSTVRVPTT----------FRYENVSI-DTLPATVDWRTKGAVTPIKD 140

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYII 371
           QG+C CCWAFSAV  +E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II
Sbjct: 141 QGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFII 200

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
            NGG+ ++  YPY A++ +  C  G        +K Y  +P   E  + K VA + P+SV
Sbjct: 201 KNGGLTTESKYPYTAADGK--CNGGSNSA--ATIKGYEEVPANNEAALMKAVANQ-PVSV 255

Query: 432 GMNANGLF--YYSGGVI------DLNQRLY-------GTSIPYWIVKNSWGSDWGEK--- 473
            ++   +   +YSGGV+      DL+  +        G    YW++KNSWG+ WGE    
Sbjct: 256 AVDGGDMTFQFYSGGVMTGSCGTDLDHGIVAIGYGKDGDGTQYWLLKNSWGTTWGENGFL 315

Query: 474 -----VEDKVGSSG 482
                + DK G  G
Sbjct: 316 RMEKDISDKRGMCG 329



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+ ++  YPY A++ +  C  G
Sbjct: 166 KLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTESKYPYTAADGK--CNGG 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P   E  + K VA + P+SV ++   +   +YSGGV+  +   C 
Sbjct: 224 SNSA--ATIKGYEEVPANNEAALMKAVANQ-PVSVAVDGGDMTFQFYSGGVMTGS---CG 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H ++ +GYG    KDG    YW++KNSWG+ WGE   L
Sbjct: 278 TDL-DHGIVAIGYG----KDGDGTQYWLLKNSWGTTWGENGFL 315



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 23/160 (14%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF--EVNKFFDLSD 99
           V R   +M  + +VY    +  RR E F  NV   E +   ++G   F   VN+F DL++
Sbjct: 34  VARHERWMEQYGRVYKDATEKARRFEIFKANVAFIESF---NAGNHKFWLGVNQFADLTN 90

Query: 100 SDLQQLTGLNLDSTLEDIQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 158
            + +         T +   PS ++ P +          F++ ++   D LP   DWR +G
Sbjct: 91  YEFRAT------KTNKGFIPSTVRVPTT----------FRYENVSI-DTLPATVDWRTKG 133

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            ++ +K+QG+C CCWAFSAV  +E +  +    L  LS Q
Sbjct: 134 AVTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQ 173


>gi|56758090|gb|AAW27185.1| SJCHGC06231 protein [Schistosoma japonicum]
          Length = 372

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 141/298 (47%), Gaps = 46/298 (15%)

Query: 202 KVYSSVEDLLRRH----ENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           + Y +V +  +R      NF+  +E    YQ E   T   GVN F D +E +L++L G  
Sbjct: 71  RAYGNVMEETKRFLIFGTNFIKMMEHNRAYQ-EGKATYKMGVNNFTDKTEYELRKLRGYR 129

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             S     +P               +   F S  H   LP+  DWR  G ++ VK QG+C
Sbjct: 130 --SACRIAKP---------------KGSTFISSEHAK-LPDRVDWRRNGAVTPVKNQGQC 171

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGG 375
             CWAFS+ G +E  H  + N L  LS QQL+DC  S  N GC GG MD A QY+ DN G
Sbjct: 172 GSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRDNKG 231

Query: 376 VVSDQAYPYKASESERG--CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           + S+ +YPY + + +    CL         +V  Y  I  G+E  +   VAT GP+SV +
Sbjct: 232 IDSEISYPYISGDGDENVRCLF-NSTNIMAQVTGYINIHEGDERALMNAVATIGPVSVAI 290

Query: 434 NAN--GLFYYSGGV------------IDLNQRLYGTSI----PYWIVKNSWGSDWGEK 473
           NA       Y  G+            +D    L G  I    PYW++KNSWG DWG+K
Sbjct: 291 NAGLPSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDK 348



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 12/163 (7%)

Query: 496 SKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG--C 551
           ++L  L+ ++L+DC  S  N GC GG MD A QY+ DN G+ S+ +YPY + + +    C
Sbjct: 192 NRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRDNKGIDSEISYPYISGDGDENVRC 251

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQR 609
           L         +V  Y  I  G+E  +   VAT GP+SV +NA       Y  G+    + 
Sbjct: 252 LF-NSTNIMAQVTGYINIHEGDERALMNAVATIGPVSVAINAGLPSFSMYKSGIYSDPEC 310

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               +  +H +++VGYG E+ K     PYW++KNSWG DWG+K
Sbjct: 311 ASASEDLDHGVLLVGYGIEDGK-----PYWLIKNSWGEDWGDK 348



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 19/154 (12%)

Query: 46  LNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL 105
           +NF R +  V    +  L    NF+  +E    YQ E   T    VN F D ++ +L++L
Sbjct: 67  INFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQ-EGKATYKMGVNNFTDKTEYELRKL 125

Query: 106 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 165
            G    S     +P               +   F S  H   LP+  DWR  G ++ VK 
Sbjct: 126 RGYR--SACRIAKP---------------KGSTFISSEHAK-LPDRVDWRRNGAVTPVKN 167

Query: 166 QGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           QG+C  CWAFS+ G +E  H  + N L  LS Q 
Sbjct: 168 QGQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQ 201


>gi|595986|gb|AAA79915.1| cysteine proteinase, partial [Dianthus caryophyllus]
          Length = 427

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/296 (34%), Positives = 157/296 (53%), Gaps = 46/296 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV----FGVNKFFDLSESDLQQLTG 255
           H K Y+++ +  +R   F  N+E  + + + ++G        G+NKF DL+  + ++   
Sbjct: 12  HRKNYNALGEKEKRFAIFRDNLEFIDQHNNNNNGGGGGEFELGLNKFADLTNDEFRR--- 68

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
                    I   ++ P  +    ++  A     ++ GD+LPE+ DWR +G +S VK+QG
Sbjct: 69  ---------IYFGVKRPEKAESVKSDRYA-----VKEGDELPESVDWRKKGAVSHVKDQG 114

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNG 374
           +C  CWAFSA+G VE ++ I    L  LS Q+LVDCD S N GC+GG MD A ++II+NG
Sbjct: 115 QCGSCWAFSAIGAVEGINKIVTGDLITLSEQELVDCDTSYNSGCDGGLMDYAFRFIINNG 174

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ +D+ YPYKA++    C    +    V +     +P   E+ ++K VA + P+ + + 
Sbjct: 175 GIDTDKDYPYKATDGS--CDSNRKNAKVVTIDGLEDVPANNEKALQKAVAHQ-PVRLAIE 231

Query: 435 ANGL---FYYSG------------GVIDLNQRLYGTS---IPYWIVKNSWGSDWGE 472
           A G     Y SG            GV+ +    YGT+     YWIV+NSWG DWGE
Sbjct: 232 AGGRDFQLYKSGVFTGSCGTSLDHGVVAVG---YGTTDDGKDYWIVRNSWGDDWGE 284



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 93/165 (56%), Gaps = 14/165 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GC+GG MD A ++II+NGG+ +D+ YPYKA++  
Sbjct: 131 INKIVTGDLITLSEQELVDCDTSYNSGCDGGLMDYAFRFIINNGGIDTDKDYPYKATDGS 190

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +     +P   E+ ++K VA + P+ + + A G  +  Y  GV   
Sbjct: 191 --CDSNRKNAKVVTIDGLEDVPANNEKALQKAVAHQ-PVRLAIEAGGRDFQLYKSGVFTG 247

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +   C   + +H ++ VGYG  +  DG    YWIV+NSWG DWGE
Sbjct: 248 S---CG-TSLDHGVVAVGYGTTD--DGKD--YWIVRNSWGDDWGE 284



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 21/156 (13%)

Query: 47  NFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFE----VNKFFDLSDSDL 102
           +++  H K Y+++ +  +R   F  N+E  + +   ++G    E    +NKF DL++ + 
Sbjct: 7   SWLVKHRKNYNALGEKEKRFAIFRDNLEFIDQHNNNNNGGGGGEFELGLNKFADLTNDEF 66

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           ++            I   ++ P  +    ++  A     ++ GD+LPE+ DWR +G +S 
Sbjct: 67  RR------------IYFGVKRPEKAESVKSDRYA-----VKEGDELPESVDWRKKGAVSH 109

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG+C  CWAFSA+G VE ++ I   +L  LS Q
Sbjct: 110 VKDQGQCGSCWAFSAIGAVEGINKIVTGDLITLSEQ 145


>gi|388519351|gb|AFK47737.1| unknown [Medicago truncatula]
          Length = 359

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 157/295 (53%), Gaps = 34/295 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           E  V+HH KVY+ + +  +R E F  N+   +++ +++    V G+NKF D +  + + +
Sbjct: 37  EWLVKHH-KVYNGLGEKDQRFEIFKDNLGFIDEHNAQNYTYKV-GLNKFADTTNEEYRNM 94

Query: 254 -TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
             G   D+    ++  +          T    + FNS   GD LP   DWR++G ++ +K
Sbjct: 95  YLGTKNDAKRNVMKIKI----------TTGHRYAFNS---GDRLPVHVDWRSKGAVAHIK 141

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYII 371
           +QG C  CWAFS +  VEA++ I    L  LS Q+LVDCD + N GCNGG MD A ++I+
Sbjct: 142 DQGSCGSCWAFSTIATVEAINKIVTGKLVSLSEQELVDCDRAFNEGCNGGLMDYAFEFIV 201

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           +NGG+ ++Q YPYK  E    C    +    V +  Y  +P   E  +KK V  + P+SV
Sbjct: 202 ENGGIDTEQDYPYKGFEGR--CDPTRKNAKVVSIDGYEDVPAYNENALKKAVFHQ-PVSV 258

Query: 432 GMNANG--LFYYSGGVI------DLNQRL----YG--TSIPYWIVKNSWGSDWGE 472
            + A G  L  Y  GV       +L+  +    YG    + YW+V+NSWG++WGE
Sbjct: 259 AIEAGGRALQLYQSGVFTGRCGTNLDHGVVVVGYGFENGVDYWLVRNSWGTNWGE 313



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 91/165 (55%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  KL  L+ ++LVDCD + N GCNGG MD A ++I++NGG+ ++Q YPYK  E  
Sbjct: 161 INKIVTGKLVSLSEQELVDCDRAFNEGCNGGLMDYAFEFIVENGGIDTEQDYPYKGFEGR 220

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C    +    V +  Y  +P   E  +KK V  + P+SV + A G  L  Y  GV   
Sbjct: 221 --CDPTRKNAKVVSIDGYEDVPAYNENALKKAVFHQ-PVSVAIEAGGRALQLYQSGVF-- 275

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C     +H +++VGYG E       + YW+V+NSWG++WGE
Sbjct: 276 -TGRCGTNL-DHGVVVVGYGFE-----NGVDYWLVRNSWGTNWGE 313



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 15/158 (9%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +T +  ++  H KVY+ + +  +R E F  N+   +++  ++    V  +NKF D ++ +
Sbjct: 32  MTMYEEWLVKHHKVYNGLGEKDQRFEIFKDNLGFIDEHNAQNYTYKV-GLNKFADTTNEE 90

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            + +  G   D+    ++  +          T    + FNS   GD LP   DWR++G +
Sbjct: 91  YRNMYLGTKNDAKRNVMKIKI----------TTGHRYAFNS---GDRLPVHVDWRSKGAV 137

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           + +K+QG C  CWAFS +  VEA++ I    L  LS Q
Sbjct: 138 AHIKDQGSCGSCWAFSTIATVEAINKIVTGKLVSLSEQ 175


>gi|55735421|gb|AAV59468.1| cathepsin [Bombyx mori NPV]
          Length = 323

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 165/338 (48%), Gaps = 47/338 (13%)

Query: 177 AVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           AV    A   ++  N  E  V   +K YSS  + LRR + F  N+ +  +    DS  A 
Sbjct: 12  AVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRH 292
           + +NKF DLS+ + + + TGL+L +  ++    +   Q P                    
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG----------------- 112

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
               P  FDWR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS QQ++DCD
Sbjct: 113 ----PLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCD 168

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A + II  GGV  +  YPY+A  +   C +   + F V+VK+  R  
Sbjct: 169 FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNSNK-FLVQVKDCYRYI 225

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYW 460
              EE++K  +   GP+ + ++A  +  Y  G+I       LN  +    YG   +IPYW
Sbjct: 226 TVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIKYCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +V+  + + G R  +L  T V+
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRN-ELASTAVI 322



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A + II  GGV  +  YPY+A  +   C +  
Sbjct: 154 NQLINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNS 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  G+I    + C    
Sbjct: 212 NK-FLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII----KYCFDSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      +IPYW  KN+WG+DWGE
Sbjct: 267 LNHAVLLVGYGVE-----NNIPYWTFKNTWGTDWGE 297



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 28/166 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P   F  F+   +K YSS  + LRR + F  N+ +  +  + DS  A +E+NKF DL
Sbjct: 22  LKAP-NYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AKYEINKFSDL 78

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 153
           S D  + + TGL+L +  ++    +   Q P                        P  FD
Sbjct: 79  SKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG---------------------PLEFD 117

Query: 154 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           WR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS Q 
Sbjct: 118 WRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQ 163


>gi|356545118|ref|XP_003540992.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 337

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 157/321 (48%), Gaps = 52/321 (16%)

Query: 177 AVGVVEAM----HAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS 232
           A+G+ + M    H        E  +  + KVY    +  +R   F  NVE  E + +  +
Sbjct: 18  ALGIPQMMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKHNVEFIESFNAAAN 77

Query: 233 GTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPS---LQAPFSSNQTDTEMRAFQFNS 289
                GVN   DL               T+E+ + S   L+ P+  + T      F++ +
Sbjct: 78  KPYKLGVNHLADL---------------TVEEFKASRNGLKRPYELSTTP-----FKYEN 117

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCA-CCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
           +     +P A DWR +G ++ +K+QG+CA  CWAFS V   E +H I    L  LS Q+L
Sbjct: 118 V---TAIPAAIDWRTKGAVTSIKDQGQCAGSCWAFSTVAATEGIHQITTGKLVSLSEQEL 174

Query: 349 VDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           VDCD    + GC GG M+D  ++II NGG+ S+  YPYKA + +      +      ++K
Sbjct: 175 VDCDTKGVDQGCEGGYMEDGFEFIIKNGGITSEANYPYKAVDGK----CNKATSPVAQIK 230

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV--------IDLNQRLYGTS 456
            Y ++P   E+ ++K VA + P+SV ++AN  G  +YS G+        +D      G  
Sbjct: 231 GYEKVPPNSEKTLQKAVANQ-PVSVSIDANGEGFMFYSSGIYNGECGTELDHGVTAVGYG 289

Query: 457 IP----YWIVKNSWGSDWGEK 473
           I     YW+VKNSWG+ WGEK
Sbjct: 290 IANGTDYWLVKNSWGTQWGEK 310



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 92/164 (56%), Gaps = 18/164 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           +   KL  L+ ++LVDCD    + GC GG M+D  ++II NGG+ S+  YPYKA + +  
Sbjct: 161 ITTGKLVSLSEQELVDCDTKGVDQGCEGGYMEDGFEFIIKNGGITSEANYPYKAVDGK-- 218

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQ 608
               +      ++K Y ++P   E+ ++K VA + P+SV ++AN  G  +YS G+ +   
Sbjct: 219 --CNKATSPVAQIKGYEKVPPNSEKTLQKAVANQ-PVSVSIDANGEGFMFYSSGIYNGE- 274

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  +H +  VGYG     D     YW+VKNSWG+ WGEK
Sbjct: 275 --CGTEL-DHGVTAVGYGIANGTD-----YWLVKNSWGTQWGEK 310



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 27/187 (14%)

Query: 16  YLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           Y     + +AL    +   + +  S   R   +M ++ KVY    +  +R   F  NVE 
Sbjct: 9   YTIALFLLLALGIPQMMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKHNVEF 68

Query: 76  AEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPS---LQAPFSSNQTDT 132
            E +    +      VN   DL               T+E+ + S   L+ P+  + T  
Sbjct: 69  IESFNAAANKPYKLGVNHLADL---------------TVEEFKASRNGLKRPYELSTTP- 112

Query: 133 EMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA-CCWAFSAVGVVEAMHAIQGNN 191
               F++ ++     +P A DWR +G ++ +K+QG+CA  CWAFS V   E +H I    
Sbjct: 113 ----FKYENV---TAIPAAIDWRTKGAVTSIKDQGQCAGSCWAFSTVAATEGIHQITTGK 165

Query: 192 LTELSVQ 198
           L  LS Q
Sbjct: 166 LVSLSEQ 172


>gi|395535909|ref|XP_003769963.1| PREDICTED: cathepsin S [Sarcophilus harrisii]
          Length = 347

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 134/250 (53%), Gaps = 33/250 (13%)

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
           +DLS + L  +T   + S +  ++   Q  +S N T      ++ NS      LP++ DW
Sbjct: 88  YDLSMNHLSDMTSEEVASLMSSLRIPNQ--WSRNTT------YRLNS---NQKLPDSVDW 136

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS----NGGC 358
           R +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC  +    N GC
Sbjct: 137 RDKGCVTEVKYQGTCGSCWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTNEKYENHGC 196

Query: 359 NGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEE 418
           NGG M +A QYIIDN G+ SD +YPYKA +   G               Y+ +PYG E+ 
Sbjct: 197 NGGCMTEAFQYIIDNNGIDSDASYPYKAKD---GKCQYNPANRAATCSRYTELPYGSEDA 253

Query: 419 MKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRLYGTSI------PYWIVK 463
           +K+ VA +GP+SVG++A+    F Y  GV        ++N  +  T         YW+VK
Sbjct: 254 LKEAVANKGPVSVGIDASLPSFFLYKSGVYYDPSCTQNVNHGVLVTGYGNLDGKDYWLVK 313

Query: 464 NSWGSDWGEK 473
           NSWG  +G+K
Sbjct: 314 NSWGLSFGDK 323



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 90/162 (55%), Gaps = 17/162 (10%)

Query: 497 KLSRLATEKLVDCDMS----NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           KL  L+ + LVDC  +    N GCNGG M +A QYIIDN G+ SD +YPYKA +   G  
Sbjct: 173 KLVSLSAQNLVDCSTNEKYENHGCNGGCMTEAFQYIIDNNGIDSDASYPYKAKD---GKC 229

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRL 610
                        Y+ +PYG E+ +K+ VA +GP+SVG++A+    F Y  GV       
Sbjct: 230 QYNPANRAATCSRYTELPYGSEDALKEAVANKGPVSVGIDASLPSFFLYKSGV--YYDPS 287

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           C     NH +++ GYG  + KD     YW+VKNSWG  +G+K
Sbjct: 288 CTQNV-NHGVLVTGYGNLDGKD-----YWLVKNSWGLSFGDK 323



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 11/105 (10%)

Query: 95  FDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 154
           +DLS + L  +T   + S +  ++   Q  +S N T      ++ NS      LP++ DW
Sbjct: 88  YDLSMNHLSDMTSEEVASLMSSLRIPNQ--WSRNTT------YRLNS---NQKLPDSVDW 136

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           R +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 137 RDKGCVTEVKYQGTCGSCWAFSAVGALEAQLKLKTGKLVSLSAQN 181


>gi|297852302|ref|XP_002894032.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
 gi|297339874|gb|EFH70291.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/276 (36%), Positives = 143/276 (51%), Gaps = 36/276 (13%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR E F  N+   +D+  ++  +   G+ +F DL+  + +      L + +E        
Sbjct: 64  RRFEIFKDNLRFIDDHNKKNL-SYRLGLTRFADLTNDEYRSKY---LGAKME-------- 111

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
                    E R  Q    R GD+LPE+ DWR +G +++VK+QG C  CWAFS +G VE 
Sbjct: 112 ------KKGERRTSQRYEARVGDELPESIDWRKKGAVAEVKDQGSCGSCWAFSTIGAVEG 165

Query: 332 MHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 390
           ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II NGG+ +D+ YPYK  +  
Sbjct: 166 INQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGT 225

Query: 391 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID- 447
             C    +    V +  Y  +P   EE +KK VA + P+SV + A G  +  Y  G+ D 
Sbjct: 226 --CDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQ-PVSVAIEAGGRAFQLYDSGIFDG 282

Query: 448 -----LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
                L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 283 TCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGE 318



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 91/166 (54%), Gaps = 15/166 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ +D+ YPYK  +    C
Sbjct: 169 IVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGT--C 226

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P   EE +KK VA + P+SV + A G  +  Y  G+ D    
Sbjct: 227 DQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQ-PVSVAIEAGGRAFQLYDSGIFD---G 282

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
            C  +  +H ++ VGYG E  KD     YWIV+NSWG  WGE   L
Sbjct: 283 TCGTQL-DHGVVAVGYGTENGKD-----YWIVRNSWGKSWGESGYL 322



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 42/66 (63%)

Query: 133 EMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNL 192
           E R  Q    R GD+LPE+ DWR +G +++VK+QG C  CWAFS +G VE ++ I   +L
Sbjct: 115 ERRTSQRYEARVGDELPESIDWRKKGAVAEVKDQGSCGSCWAFSTIGAVEGINQIVTGDL 174

Query: 193 TELSVQ 198
             LS Q
Sbjct: 175 ITLSEQ 180


>gi|310656790|gb|ADP02219.1| Peptidase_C1 domain-containing protein [Triticum aestivum]
          Length = 419

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 163/316 (51%), Gaps = 50/316 (15%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF--GVNKFFDLSESDLQQLTGLNL 258
           ++VY    +  +R + F  NV   E +   ++G   F  GVN+F DL+  + +       
Sbjct: 45  NRVYKDSTEKAQRFKAFKANVAFIESF---NTGNHKFWLGVNQFTDLTNDEFR---ATKT 98

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
           +  L+  +   +AP            F++N++   D LP A DWR +GV++ +K+QG+C 
Sbjct: 99  NKGLK--RNGARAP----------TRFKYNNVST-DALPAAVDWRTKGVVTPIKDQGQCG 145

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGV 376
           CCWAFSAV   E +  +    L  LS Q+LVDCD+   + GC GG MD+A ++II NGG+
Sbjct: 146 CCWAFSAVAATEGIVKLSTGKLVSLSEQELVDCDVHGVDQGCEGGEMDNAFKFIIKNGGL 205

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPY A + +  C           +K Y  +P  +E  + K VA + P+SV ++  
Sbjct: 206 TTEANYPYTAQDGQ--CKTSTTSNSVATIKGYEDVPANDESSLMKAVANQ-PVSVAVDGG 262

Query: 437 GLFY--YSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK-------- 473
            + +  YSGGV+      DL+  +    YG +     +W++KNSWG+ WGE         
Sbjct: 263 DVIFQHYSGGVMTGSCGTDLDHGIVAIGYGMTSDGTKFWLLKNSWGTTWGESGYLRMEKD 322

Query: 474 VEDKVGS-SGNRTRDL 488
           + DK G+  GN + +L
Sbjct: 323 ISDKSGTIIGNNSYNL 338



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 15/163 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MD+A ++II NGG+ ++  YPY A + +  C   
Sbjct: 166 KLVSLSEQELVDCDVHGVDQGCEGGEMDNAFKFIIKNGGLTTEANYPYTAQDGQ--CKTS 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
                   +K Y  +P  +E  + K VA + P+SV ++   + +  YSGGV+  +   C 
Sbjct: 224 TTSNSVATIKGYEDVPANDESSLMKAVANQ-PVSVAVDGGDVIFQHYSGGVMTGS---CG 279

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H ++ +GYG     DGT   +W++KNSWG+ WGE   L
Sbjct: 280 TDL-DHGIVAIGYGMTS--DGTK--FWLLKNSWGTTWGESGYL 317



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 22/185 (11%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSP-VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           L   +  + L  S +   R   ++  V +   +M   ++VY    +  +R + F  NV  
Sbjct: 8   LLAIIGSICLCSSTVLSARELGDAAMVEKHEQWMAKFNRVYKDSTEKAQRFKAFKANVAF 67

Query: 76  AEDYQREDSGTAVF--EVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTE 133
            E +   ++G   F   VN+F DL++ + +       +  L+  +   +AP         
Sbjct: 68  IESF---NTGNHKFWLGVNQFTDLTNDEFR---ATKTNKGLK--RNGARAP--------- 110

Query: 134 MRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLT 193
              F++N++   D LP A DWR +GV++ +K+QG+C CCWAFSAV   E +  +    L 
Sbjct: 111 -TRFKYNNVST-DALPAAVDWRTKGVVTPIKDQGQCGCCWAFSAVAATEGIVKLSTGKLV 168

Query: 194 ELSVQ 198
            LS Q
Sbjct: 169 SLSEQ 173


>gi|82659048|gb|ABB88697.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 175/375 (46%), Gaps = 47/375 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWRKKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ LT LS QQLV CD  + GC GG M  A ++++   NG + 
Sbjct: 150 CWAFSAVGSIESQWALAGHGLTALSEQQLVSCDDKDNGCGGGLMLQAFEWLLRNMNGTMF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +S      C    +     ++  Y  I    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIE-SSETVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVID------LNQ--RLYGTS----IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN    L G +    +PYW++KNSWG DWGE   V   +G + 
Sbjct: 269 SFMSYQSGVLTSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGEDWGENGYVRVTMGVNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDMS-NGGCNGGRMDDALQYI 528
               +  ++  +P   +             R+  E+++  DMS   GC    +   +   
Sbjct: 329 CLLTEYPVSAHVPQSPTPGPSTESEERAPKRVMVEQIICTDMSCTKGCRKTLLTANVCQP 388

Query: 529 IDNGGVVSDQAYPYK 543
              GG    +  P+K
Sbjct: 389 NGGGGSSMTKCSPHK 403



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 13/157 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L+ L+ ++LV CD  + GC GG M  A ++++ N  G + ++ +YPY +S      C   
Sbjct: 170 LTALSEQQLVSCDDKDNGCGGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNS 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +     ++  Y  I    E  M  W+A  GP+S+ ++A+    Y  GV+      C   
Sbjct: 230 SQLVPGARIDGYMTIE-SSETVMAAWLAKNGPISIAVDASSFMSYQSGVLTS----CAGD 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           A NH +++VGY    +     +PYW++KNSWG DWGE
Sbjct: 285 ALNHGVLLVGYNRTGE-----VPYWVIKNSWGEDWGE 316



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ LT LS Q 
Sbjct: 134 KKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHGLTALSEQQ 177


>gi|37651368|ref|NP_932731.1| cathepsin [Choristoneura fumiferana DEF MNPV]
 gi|82024252|sp|Q6VTL7.1|CATV_NPVCD RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|37499277|gb|AAQ91676.1| cathepsin [Choristoneura fumiferana DEF MNPV]
          Length = 324

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 162/303 (53%), Gaps = 39/303 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQLTG 255
           + + +K YSS  + L R + F  N+E+  +    D+ +A + +NKF DLS+ + + + TG
Sbjct: 32  LHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDT-SAQYEINKFSDLSKDETISKYTG 90

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L+L          LQ     NQ   E+        R  D  P  FDWR    ++ VK QG
Sbjct: 91  LSL---------PLQ-----NQNFCEVVVLN----RPPDKGPLEFDWRRLNKVTSVKNQG 132

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGG 375
            C  CWAF+ +G +E+  AI+ + L  LS QQL+DCD  + GC+GG +  A + +++ GG
Sbjct: 133 TCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDMGCDGGLLHTAYEAVMNMGG 192

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPY+A+  +  C +   + F VKVK+  R     EE++K  +   GPL V ++A
Sbjct: 193 IQAENDYPYEANNGD--CRLNAAK-FVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDA 249

Query: 436 NGLFYYSGGVID------LNQR--LYGTS----IPYWIVKNSWGSDWGE----KVEDKVG 479
           + +  Y  GVI       LN    L G +    +P+WI+KN+WG+DWGE    +V+  + 
Sbjct: 250 SDIVNYKRGVIRYCANHGLNHAVLLVGYAVENGVPFWILKNTWGTDWGEQGYFRVQQNIN 309

Query: 480 SSG 482
           + G
Sbjct: 310 ACG 312



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 93/156 (59%), Gaps = 12/156 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++L+DCD  + GC+GG +  A + +++ GG+ ++  YPY+A+  +  C +   
Sbjct: 156 QLINLSEQQLIDCDFVDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGD--CRLNAA 213

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           + F VKVK+  R     EE++K  +   GPL V ++A+ +  Y  GVI    R C     
Sbjct: 214 K-FVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVNYKRGVI----RYCANHGL 268

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           NHA+++VGY  E       +P+WI+KN+WG+DWGE+
Sbjct: 269 NHAVLLVGYAVE-----NGVPFWILKNTWGTDWGEQ 299



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 21/163 (12%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P + F +F+ + +K YSS  + L R + F  N+E+  +    D+ +A +E+NKF DL
Sbjct: 22  LKAP-SYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDT-SAQYEINKFSDL 79

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           S D  + + TGL+L          LQ     NQ   E+        R  D  P  FDWR 
Sbjct: 80  SKDETISKYTGLSL---------PLQ-----NQNFCEVVVLN----RPPDKGPLEFDWRR 121

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
              ++ VK QG C  CWAF+ +G +E+  AI+ + L  LS Q 
Sbjct: 122 LNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQ 164


>gi|195628596|gb|ACG36128.1| vignain precursor [Zea mays]
          Length = 362

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 155/312 (49%), Gaps = 42/312 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TG 255
           +  + + Y    +   R + F  N E  +   +      V G N+F DL+  +   + TG
Sbjct: 63  MAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAGGKKKYVLGTNQFADLTSKEFAAMYTG 122

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L   + +      + A F              N  R  DD+    DWR +G ++ VK QG
Sbjct: 123 LRKPAAVPSGAKQIPAGFKYQ-----------NFTRLDDDV--QVDWRQQGAVTPVKNQG 169

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDN 373
           +C CCWAFSAVG +E +  I   +L  LS QQ++DCD S+G  GCNGG MD+A QY+++N
Sbjct: 170 QCGCCWAFSAVGAMEGLIMITTGNLVSLSEQQILDCDESDGNQGCNGGYMDNAFQYVVNN 229

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GGV ++ AYPY A +    C   +       +  +  +P G+E  +   VA + P+SVG+
Sbjct: 230 GGVTTEDAYPYSAVQGT--C---QNVQPAATISGFQDLPSGDENALANAVANQ-PVSVGV 283

Query: 434 N--ANGLFYYSGGV-------IDLNQRL----YGT---SIPYWIVKNSWGSDWGE----K 473
           +  ++   +Y GG+        D+N  +    YG       YWI+KNSWG+ WGE    +
Sbjct: 284 DGGSSPFQFYQGGIYDGDGCGTDMNHAVTAIGYGADDQGTQYWILKNSWGTGWGENGFMQ 343

Query: 474 VEDKVGSSGNRT 485
           ++  VG+ G  T
Sbjct: 344 LQMGVGACGIST 355



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 97/166 (58%), Gaps = 17/166 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           L  +    L  L+ ++++DCD S+G  GCNGG MD+A QY+++NGGV ++ AYPY A + 
Sbjct: 186 LIMITTGNLVSLSEQQILDCDESDGNQGCNGGYMDNAFQYVVNNGGVTTEDAYPYSAVQG 245

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN--ANGLFYYSGGVID 605
              C   +       +  +  +P G+E  +   VA + P+SVG++  ++   +Y GG+ D
Sbjct: 246 T--C---QNVQPAATISGFQDLPSGDENALANAVANQ-PVSVGVDGGSSPFQFYQGGIYD 299

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +   C     NHA+  +GYG +++  GT   YWI+KNSWG+ WGE
Sbjct: 300 GDG--CGTD-MNHAVTAIGYGADDQ--GTQ--YWILKNSWGTGWGE 338



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 14/159 (8%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           + R+  +M  + + Y    +   R + F  N E  +          V   N+F DL+  +
Sbjct: 56  MARYKKWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAGGKKKYVLGTNQFADLTSKE 115

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
              + TGL   + +      + A F              N  R  DD+    DWR +G +
Sbjct: 116 FAAMYTGLRKPAAVPSGAKQIPAGFKYQ-----------NFTRLDDDV--QVDWRQQGAV 162

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + VK QG+C CCWAFSAVG +E +  I   NL  LS Q 
Sbjct: 163 TPVKNQGQCGCCWAFSAVGAMEGLIMITTGNLVSLSEQQ 201


>gi|326430490|gb|EGD76060.1| cysteine proteinase [Salpingoeca sp. ATCC 50818]
          Length = 448

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 144/288 (50%), Gaps = 38/288 (13%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS---GTAVFGVNKFFDLSESDLQQLTGLN 257
           +KVY S E+  RR   F  N++    + +E +    T    VN+F DL+  + +QL    
Sbjct: 38  NKVYESAEEEARRFSVFSQNIDFINRHNAEAARGVHTHTVDVNQFADLTNEEYRQL---- 93

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
                         P+ +     E +    +    G     + DWR +G ++ +K QG+C
Sbjct: 94  -----------YLRPYPTELLGRERQEVWLDGPNAG-----SVDWRQKGAVTPIKNQGQC 137

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGG 375
             CW+FS  G VE  HAI   +L  LS QQLVDC  S  N GCNGG MD+A +YII NGG
Sbjct: 138 GSCWSFSTTGSVEGAHAIATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDNAFKYIISNGG 197

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++Q YPY A +    C   +E    V +  Y  +P   E+++   V  +GP+SV + A
Sbjct: 198 LDTEQDYPYTARDGV--CDKSKESKHAVSISGYKDVPQNNEDQLAAAV-EKGPVSVAIEA 254

Query: 436 NGLFY--YSGGV--------IDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           +   +  YS GV        +D    + G +  YWIVKNSWG+ WG++
Sbjct: 255 DQQSFQMYSSGVFSGPCGTNLDHGVLVVGYTSDYWIVKNSWGASWGDQ 302



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 24/166 (14%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           +    L  L+ ++LVDC  S  N GCNGG MD+A +YII NGG+ ++Q YPY A +    
Sbjct: 155 IATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDNAFKYIISNGGLDTEQDYPYTARDGV-- 212

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQ 608
           C   +E    V +  Y  +P   E+++   V  +GP+SV + A+   +  YS GV     
Sbjct: 213 CDKSKESKHAVSISGYKDVPQNNEDQLAAAV-EKGPVSVAIEADQQSFQMYSSGVFS--- 268

Query: 609 RLCNPKAQN--HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               P   N  H +++VGY  +         YWIVKNSWG+ WG++
Sbjct: 269 ---GPCGTNLDHGVLVVGYTSD---------YWIVKNSWGASWGDQ 302



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 23/158 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS---GTAVFEVNKFFDLSDSD 101
           F  F    +KVY S E+  RR   F  N++    +  E +    T   +VN+F DL++ +
Sbjct: 30  FDAFKTKFNKVYESAEEEARRFSVFSQNIDFINRHNAEAARGVHTHTVDVNQFADLTNEE 89

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +QL                  P+ +     E +    +    G     + DWR +G ++
Sbjct: 90  YRQL---------------YLRPYPTELLGRERQEVWLDGPNAG-----SVDWRQKGAVT 129

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +K QG+C  CW+FS  G VE  HAI   NL  LS Q 
Sbjct: 130 PIKNQGQCGSCWSFSTTGSVEGAHAIATGNLVSLSEQQ 167


>gi|113120269|gb|ABI30274.1| VS-B, partial [Vasconcellea stipulata]
          Length = 341

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 157/306 (51%), Gaps = 34/306 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ--LTGLN 257
           HDKVY ++++ + R E F  N+    D  ++ + +   G+N+F DL+  + ++  +  + 
Sbjct: 55  HDKVYKTIDEKIYRFETFKDNLMYI-DETNKKNNSYWLGLNEFADLTHDEFKEKYVGSIP 113

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            DS + +    ++ P                  +H  D PE+ DWR +G ++ VK Q  C
Sbjct: 114 EDSMIIEQSDDVEFPN-----------------KHVVDYPESIDWRQKGAVTPVKNQNPC 156

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
             CWAFS V  VE ++ I   +L  LS Q+L+DCD  + GC GG    +L+Y++DN GV 
Sbjct: 157 GSCWAFSTVATVEGINKIVTGNLISLSEQELLDCDRRSHGCKGGYQTTSLKYVVDN-GVH 215

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +++ YPY+  +    C    ++G KV +  Y R+P  +E  + K ++ + P+SV + + G
Sbjct: 216 TEKEYPYEKKQGN--CRAKNKKGLKVYINGYKRVPSNDEISLIKTISIQ-PVSVLVESKG 272

Query: 438 --LFYYSGGV--------IDLNQRLYGTSIPYWIVKNSWGSDWGEKVEDKVGSSGNRTRD 487
               +Y GGV        +D      G    Y ++KNSWG  WG+K   K+  +  ++  
Sbjct: 273 RPFQFYKGGVFGGPCGTKLDHAVTAVGYGKDYILIKNSWGPKWGDKGYIKIKRASGQSEH 332

Query: 488 LELTGV 493
            ELTGV
Sbjct: 333 AELTGV 338



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 19/165 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  ++   L  L+ ++L+DCD  + GC GG    +L+Y++DN GV +++ YPY+  +   
Sbjct: 171 INKIVTGNLISLSEQELLDCDRRSHGCKGGYQTTSLKYVVDN-GVHTEKEYPYEKKQGN- 228

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLN 607
            C    ++G KV +  Y R+P  +E  + K ++ + P+SV + + G    +Y GGV    
Sbjct: 229 -CRAKNKKGLKVYINGYKRVPSNDEISLIKTISIQ-PVSVLVESKGRPFQFYKGGVFG-- 284

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              C  K  +HA+  VGYG++         Y ++KNSWG  WG+K
Sbjct: 285 -GPCGTKL-DHAVTAVGYGKD---------YILIKNSWGPKWGDK 318



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 27/181 (14%)

Query: 27  LESNIFQTRGY-------LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           L S  F   GY       + S +  F ++M  HDKVY ++++ + R E F  N+   ++ 
Sbjct: 23  LSSADFSIVGYSQDDLTSIESSIRLFESWMLKHDKVYKTIDEKIYRFETFKDNLMYIDET 82

Query: 80  QREDSGTAVFEVNKFFDLSDSDLQQ--LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAF 137
            ++++ +    +N+F DL+  + ++  +  +  DS + +    ++ P             
Sbjct: 83  NKKNN-SYWLGLNEFADLTHDEFKEKYVGSIPEDSMIIEQSDDVEFPN------------ 129

Query: 138 QFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSV 197
                +H  D PE+ DWR +G ++ VK Q  C  CWAFS V  VE ++ I   NL  LS 
Sbjct: 130 -----KHVVDYPESIDWRQKGAVTPVKNQNPCGSCWAFSTVATVEGINKIVTGNLISLSE 184

Query: 198 Q 198
           Q
Sbjct: 185 Q 185


>gi|32396018|gb|AAP41846.1| cysteine protease [Anthurium andraeanum]
          Length = 502

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 156/305 (51%), Gaps = 38/305 (12%)

Query: 189 GNNLTELSVQHHDKVYSSVEDLLRRHENFVTNV-----EKAEDYQSEDSGTAVFGVNKFF 243
           G  L E  ++ H KVY+   +  RR+ NF++N+       AE  ++  SG  V G+N F 
Sbjct: 47  GQELFERWMEKHRKVYAHPGEKARRYANFLSNLAFVRKRNAEGRRAPSSGQGV-GMNVFA 105

Query: 244 DLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 303
           DLS  + +++    +      ++        + +   E R         G D P + DWR
Sbjct: 106 DLSNEEFREVYSSRV------LRKKAAEGRGARRRAGEGRVVA------GCDAPASLDWR 153

Query: 304 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRM 363
             G ++ VK QG C  CWAFS+ G +E ++AI    L  LS Q+LVDCD +N GC+GG M
Sbjct: 154 KRGAVTAVKNQGDCGSCWAFSSTGAMEGINAITTGELISLSEQELVDCDTTNEGCDGGYM 213

Query: 364 DDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWV 423
           D A +++I+NGG+ S+  YPY   +++  C   +EE   V +  Y  +   E   +    
Sbjct: 214 DYAFEWVINNGGIDSEANYPYTG-QADSVCNTTKEEIKVVSIDGYEDVATSESALL--CA 270

Query: 424 ATRGPLSVGMNANGLFY--YSGGVI---------DLNQRL----YGT--SIPYWIVKNSW 466
           A + P+SVG++ + L +  Y+GG+          D++  +    YG      YWIVKNSW
Sbjct: 271 AVQQPVSVGIDGSSLDFQLYAGGIYDGDCSGNPDDIDHAVLVVGYGQQGGTDYWIVKNSW 330

Query: 467 GSDWG 471
           G+DWG
Sbjct: 331 GTDWG 335



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 11/163 (6%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  +   +L  L+ ++LVDCD +N GC+GG MD A +++I+NGG+ S+  YPY   +++ 
Sbjct: 182 INAITTGELISLSEQELVDCDTTNEGCDGGYMDYAFEWVINNGGIDSEANYPYTG-QADS 240

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLN 607
            C   +EE   V +  Y  +   E   +    A + P+SVG++ + L +  Y+GG+ D +
Sbjct: 241 VCNTTKEEIKVVSIDGYEDVATSESALL--CAAVQQPVSVGIDGSSLDFQLYAGGIYDGD 298

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
               NP   +HA+++VGYG++   D     YWIVKNSWG+DWG
Sbjct: 299 CSG-NPDDIDHAVLVVGYGQQGGTD-----YWIVKNSWGTDWG 335



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 18/159 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNV-----EKAEDYQREDSGTAVFEVNKFFDLSD 99
           F  +M  H KVY+   +  RR+ NF++N+       AE  +   SG  V  +N F DLS+
Sbjct: 51  FERWMEKHRKVYAHPGEKARRYANFLSNLAFVRKRNAEGRRAPSSGQGV-GMNVFADLSN 109

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
            + +++    +      ++        + +   E R         G D P + DWR  G 
Sbjct: 110 EEFREVYSSRV------LRKKAAEGRGARRRAGEGRVVA------GCDAPASLDWRKRGA 157

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ VK QG C  CWAFS+ G +E ++AI    L  LS Q
Sbjct: 158 VTAVKNQGDCGSCWAFSSTGAMEGINAITTGELISLSEQ 196


>gi|30690594|ref|NP_564321.2| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|28393492|gb|AAO42167.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332192920|gb|AEE31041.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 355

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 156/309 (50%), Gaps = 54/309 (17%)

Query: 195 LSVQHH-------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKF----- 242
           +  +HH        +VYS   +   R + F  N++  E +  +   T   GVN+F     
Sbjct: 42  IVAEHHQQWMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTR 101

Query: 243 --FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAF 300
             F  + + L+ + G+     ++++ PS    ++ N +D   R              E  
Sbjct: 102 EEFIATHTGLKGVNGIPSSEFVDEMIPS----WNWNVSDVAGR--------------ETK 143

Query: 301 DWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCN 359
           DWR EG ++ VK QG+C CCWAFS+V  VE +  I GN+L  LS QQL+DCD   + GCN
Sbjct: 144 DWRYEGAVTPVKYQGQCGCCWAFSSVAAVEGLTKIVGNNLVSLSEQQLLDCDRERDNGCN 203

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG M DA  YII N G+ S+ +YPY+A+E    C    +      ++ +  +P   E  +
Sbjct: 204 GGIMSDAFSYIIKNRGIASEASYPYQAAEGT--CRYNGKP--SAWIRGFQTVPSNNERAL 259

Query: 420 KKWVATRGPLSVGMNAN--GLFYYSGGVID-------LNQRL----YGTS---IPYWIVK 463
            + V ++ P+SV ++A+  G  +YSGGV D       +N  +    YGTS   I YW+ K
Sbjct: 260 LEAV-SKQPVSVSIDADGPGFMHYSGGVYDEPYCGTNVNHAVTFVGYGTSPEGIKYWLAK 318

Query: 464 NSWGSDWGE 472
           NSWG  WGE
Sbjct: 319 NSWGETWGE 327



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           LT ++ + L  L+ ++L+DCD   + GCNGG M DA  YII N G+ S+ +YPY+A+E  
Sbjct: 175 LTKIVGNNLVSLSEQQLLDCDRERDNGCNGGIMSDAFSYIIKNRGIASEASYPYQAAEGT 234

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDL 606
             C    +      ++ +  +P   E  + + V ++ P+SV ++A+  G  +YSGGV D 
Sbjct: 235 --CRYNGKP--SAWIRGFQTVPSNNERALLEAV-SKQPVSVSIDADGPGFMHYSGGVYD- 288

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +  C     NHA+  VGYG   +     I YW+ KNSWG  WGE
Sbjct: 289 -EPYCGTNV-NHAVTFVGYGTSPE----GIKYWLAKNSWGETWGE 327



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 25/159 (15%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKF-------FDLSDS 100
           +M    +VYS   +   R + F  N++  E + ++   T    VN+F       F  + +
Sbjct: 50  WMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTREEFIATHT 109

Query: 101 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            L+ + G+     ++++ PS    ++ N +D   R              E  DWR EG +
Sbjct: 110 GLKGVNGIPSSEFVDEMIPS----WNWNVSDVAGR--------------ETKDWRYEGAV 151

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + VK QG+C CCWAFS+V  VE +  I GNNL  LS Q 
Sbjct: 152 TPVKYQGQCGCCWAFSSVAAVEGLTKIVGNNLVSLSEQQ 190


>gi|394331820|gb|AFN27129.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 175/375 (46%), Gaps = 47/375 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWRKKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ LT LS QQLV CD  + GC GG M  A ++++   NG + 
Sbjct: 150 CWAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDNGCRGGLMLQAFEWLLRNMNGTMF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +S      C    +     ++  Y  I    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEDSYPYVSSTGYVPECSNSSQLVPGARIDGYMTIE-SSETVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN  +    Y  +  +PYW++KNSWG +WGE   V   +G + 
Sbjct: 269 SFMSYQSGVLTSCAGMPLNHGVLLVWYNRTGEVPYWVIKNSWGENWGENGYVRVTMGVNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM-SNGGCNGGRMDDALQYI 528
               +  ++  +P  L              R+  E+++  DM    GC    +   + + 
Sbjct: 329 CLLTEYPVSAHVPQSLPPGPSTESEERAPKRVMVEQIICTDMYCREGCRKTLLTANVCHP 388

Query: 529 IDNGGVVSDQAYPYK 543
              GG    +  P+K
Sbjct: 389 NGGGGSSMTKCSPHK 403



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 13/158 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L+ L+ ++LV CD  + GC GG M  A ++++ N  G + ++ +YPY +S      C  
Sbjct: 169 RLTALSEQQLVSCDDKDNGCRGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSTGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             +     ++  Y  I    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSQLVPGARIDGYMTIE-SSETVMAAWLAKNGPISIAVDASSFMSYQSGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              NH +++V Y    +     +PYW++KNSWG +WGE
Sbjct: 284 MPLNHGVLLVWYNRTGE-----VPYWVIKNSWGENWGE 316



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ LT LS Q 
Sbjct: 134 KKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSEQQ 177


>gi|125547258|gb|EAY93080.1| hypothetical protein OsI_14881 [Oryza sativa Indica Group]
          Length = 314

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 150/295 (50%), Gaps = 36/295 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H + Y+   + +RR E F  NV   E      S  A    +KF+ L E+    LT  
Sbjct: 9   MAKHGRAYADDAEKVRRLEVFRDNVAFIE------SVNAAASQHKFW-LEENQFADLTNA 61

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              +T   ++PS      S++ +    +F++ ++  GD LP + DWR +G ++ VK+QG 
Sbjct: 62  EFRATRTGLRPS------SSRGNRAPTSFRYANVSTGD-LPASVDWRGKGAVNPVKDQGD 114

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV  +E    +    L  LS QQLV CD+   + GC GG MDDA  +II NG
Sbjct: 115 CGCCWAFSAVAAMEGAVKLATGKLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNG 174

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPY AS+ +  C           +K Y  +P  +E  + K VA + P+SV ++
Sbjct: 175 GLAAESDYPYTASDDK--CATAGAGAAAATIKGYEDVPANDEAALLKAVANQ-PVSVAID 231

Query: 435 ANG--LFYYSGGVI--------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
                  +Y GGV+        +L+  +    YG +     YW++KNSWG+ WGE
Sbjct: 232 GGDRHFQFYKGGVLSGAAGCATELDHAITAVGYGVASDGTKYWLMKNSWGTSWGE 286



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LV CD+   + GC GG MDDA  +II NGG+ ++  YPY AS+ +  C   
Sbjct: 137 KLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNGGLAAESDYPYTASDDK--CATA 194

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
                   +K Y  +P  +E  + K VA + P+SV ++       +Y GGV  L+     
Sbjct: 195 GAGAAAATIKGYEDVPANDEAALLKAVANQ-PVSVAIDGGDRHFQFYKGGV--LSGAAGC 251

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               +HA+  VGYG     DGT   YW++KNSWG+ WGE
Sbjct: 252 ATELDHAITAVGYG--VASDGTK--YWLMKNSWGTSWGE 286



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 14/156 (8%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  H + Y+   + +RR E F  NV   E      S  A    +KF+ L ++   
Sbjct: 4   RHERWMAKHGRAYADDAEKVRRLEVFRDNVAFIE------SVNAAASQHKFW-LEENQFA 56

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            LT     +T   ++PS      S++ +    +F++ ++  GD LP + DWR +G ++ V
Sbjct: 57  DLTNAEFRATRTGLRPS------SSRGNRAPTSFRYANVSTGD-LPASVDWRGKGAVNPV 109

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG C CCWAFSAV  +E    +    L  LS Q 
Sbjct: 110 KDQGDCGCCWAFSAVAAMEGAVKLATGKLVSLSEQQ 145


>gi|356554921|ref|XP_003545789.1| PREDICTED: LOW QUALITY PROTEIN: thiol protease SEN102-like [Glycine
           max]
          Length = 439

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 144/291 (49%), Gaps = 37/291 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H KVY    +  +R   F  NV   E + +  +     G+N+F DL+  +          
Sbjct: 142 HGKVYKDPREREKRFRIFNENVNYVEAFNNAANKPYKLGINQFXDLTNQEF--------- 192

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                I P  +  F  +   + +R   F    +   +P   DWR  G ++ VK+QG+C C
Sbjct: 193 -----IAP--RNRFKGHMCSSIIRTTTFK-YENVTTVPSTVDWRQNGAVTPVKDQGQCGC 244

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVV 377
           CWAFSAV   E +HA+ G  L  LS Q+LVDCD    + GC GG MDDA ++II N G+ 
Sbjct: 245 CWAFSAVAATEGIHALSGGKLISLSEQELVDCDTKGVDQGCEGGLMDDAYKFIIQNHGLN 304

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++  YPYK  + +  C   E       +  Y  +P   E+ ++K VA + P+SV ++A+ 
Sbjct: 305 TEANYPYKGVDGK--CNANEAANHAATITGYEDVPANNEKALQKAVANQ-PVSVAIDASS 361

Query: 438 ---LFYYSGGV-----IDLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
               FY SG        +L+  +    YG S     YW+VKNSWG++WGE+
Sbjct: 362 SDFQFYKSGAFTGSCGTELDHGVTAVGYGVSDHGTKYWLVKNSWGTEWGEE 412



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 17/161 (10%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG MDDA ++II N G+ ++  YPYK  + +  C   
Sbjct: 264 KLISLSEQELVDCDTKGVDQGCEGGLMDDAYKFIIQNHGLNTEANYPYKGVDGK--CNAN 321

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG---LFYYSGGVIDLNQRLC 611
           E       +  Y  +P   E+ ++K VA + P+SV ++A+     FY SG         C
Sbjct: 322 EAANHAATITGYEDVPANNEKALQKAVANQ-PVSVAIDASSSDFQFYKSGAFTG----SC 376

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +  +H +  VGYG  +   GT   YW+VKNSWG++WGE+
Sbjct: 377 GTEL-DHGVTAVGYGVSDH--GTK--YWLVKNSWGTEWGEE 412



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  H KVY    +  +R   F  NV   E +    +      +N+F DL++ +  
Sbjct: 134 RHEQWMTRHGKVYKDPREREKRFRIFNENVNYVEAFNNAANKPYKLGINQFXDLTNQEF- 192

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +  F  +   + +R   F    +   +P   DWR  G ++ V
Sbjct: 193 -------------IAP--RNRFKGHMCSSIIRTTTFK-YENVTTVPSTVDWRQNGAVTPV 236

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +HA+ G  L  LS Q
Sbjct: 237 KDQGQCGCCWAFSAVAATEGIHALSGGKLISLSEQ 271


>gi|15320768|ref|NP_203280.1| V-CATH [Epiphyas postvittana NPV]
 gi|37077652|sp|Q91GE3.1|CATV_NPVEP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|15213236|gb|AAK85675.1| V-CATH [Epiphyas postvittana NPV]
          Length = 323

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 162/327 (49%), Gaps = 40/327 (12%)

Query: 173 WAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS 232
           W    V    A   ++  N  E  V+ ++K Y S  + LRR++ F  N+         D 
Sbjct: 8   WFVYGVVCSAAYDILKAPNYFEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRND- 66

Query: 233 GTAVFGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 291
            TAV+ +NKF DLS+ + + + TGL+L             P  + Q   E+        R
Sbjct: 67  -TAVYKINKFSDLSKDETIAKYTGLSL-------------PLHT-QNFCEVVVLD----R 107

Query: 292 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC 351
                P  FDWR    I+ VK QG C  CWAF+ +  +E+  AI  + L  LS QQ++DC
Sbjct: 108 PPGKGPLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDC 167

Query: 352 DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI 411
           D  + GC GG +  A + II  GGV  +  YPY++S +   C + +   F V VK+ +R 
Sbjct: 168 DSVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNNY--CRM-DPTKFVVGVKQCNRY 224

Query: 412 PYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPY 459
               EE++K  +   GP+ V ++A+ +  Y  G+I       LN  +    YG   ++PY
Sbjct: 225 ITIYEEKLKDVLRLAGPIPVAIDASDILNYEQGIIKYCANNGLNHAVLLVGYGVENNVPY 284

Query: 460 WIVKNSWGSDWGE----KVEDKVGSSG 482
           WI+KNSWG+DWGE    K++  V + G
Sbjct: 285 WILKNSWGTDWGEQGFFKIQQNVNACG 311



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 92/156 (58%), Gaps = 12/156 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++++DCD  + GC GG +  A + II  GGV  +  YPY++S +   C + + 
Sbjct: 155 RLINLSEQQMIDCDSVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNNY--CRM-DP 211

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
             F V VK+ +R     EE++K  +   GP+ V ++A+ +  Y  G+I    + C     
Sbjct: 212 TKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILNYEQGII----KYCANNGL 267

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           NHA+++VGYG E      ++PYWI+KNSWG+DWGE+
Sbjct: 268 NHAVLLVGYGVE-----NNVPYWILKNSWGTDWGEQ 298



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 22/163 (13%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P   F  F+R ++K Y S  + LRR++ F  N+       R D  TAV+++NKF DL
Sbjct: 22  LKAP-NYFEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRND--TAVYKINKFSDL 78

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           S D  + + TGL+L             P  + Q   E+        R     P  FDWR 
Sbjct: 79  SKDETIAKYTGLSL-------------PLHT-QNFCEVVVLD----RPPGKGPLEFDWRR 120

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
              I+ VK QG C  CWAF+ +  +E+  AI  + L  LS Q 
Sbjct: 121 FNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQ 163


>gi|161408101|dbj|BAF94154.1| cathepsin F-like cysteine protease [Plautia stali]
          Length = 803

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 140/294 (47%), Gaps = 44/294 (14%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           + Y + E+L +R   F  N++KA+  Q  + GTA +GV  F D+S  + ++   L L   
Sbjct: 509 RSYKTTEELKKRFRIFRANMKKADYLQKTEQGTAKYGVTIFSDISSKEFKK-HYLGLKKR 567

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
             DI+   +     N T                 LPE +DWR    ++ VK QG C  CW
Sbjct: 568 TPDIKFKQEMAQIPNIT-----------------LPEEYDWRNYNAVTPVKNQGMCGSCW 610

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQA 381
           AFS  G +E  +AI+  +L  LS Q+LVDCD  + GC GG  + A   I + GG+  +  
Sbjct: 611 AFSVTGNIEGQYAIKTGNLVSLSEQELVDCDKYDDGCEGGLFETAYHAIEELGGLELESD 670

Query: 382 YPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYY 441
           YPY  S  +  C     E  +V +     I   +E +M KW+   GP+S+G+NAN + +Y
Sbjct: 671 YPY--SGRDNTCHFNSSE-VRVSITSSVNIS-NDETDMAKWLVANGPISIGINANAMQFY 726

Query: 442 SGGV------------IDLNQRLYGTSI----------PYWIVKNSWGSDWGEK 473
            GGV            +D    + G  I          PYW++KNSW S WG K
Sbjct: 727 LGGVSHPLKFLCDPKTLDHGVLIVGYGIHRTWLLHRHLPYWLIKNSWSSYWGAK 780



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 5/156 (3%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  + GC GG  + A   I + GG+  +  YPY  S  +  C     E
Sbjct: 629 LVSLSEQELVDCDKYDDGCEGGLFETAYHAIEELGGLELESDYPY--SGRDNTCHFNSSE 686

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
             +V +     I   +E +M KW+   GP+S+G+NAN + +Y GGV    + LC+PK  +
Sbjct: 687 -VRVSITSSVNIS-NDETDMAKWLVANGPISIGINANAMQFYLGGVSHPLKFLCDPKTLD 744

Query: 618 HALIIVGYGEEEK-KDGTSIPYWIVKNSWGSDWGEK 652
           H ++IVGYG          +PYW++KNSW S WG K
Sbjct: 745 HGVLIVGYGIHRTWLLHRHLPYWLIKNSWSSYWGAK 780



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 18/145 (12%)

Query: 54  KVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDST 113
           + Y + E+L +R   F  N++KA+  Q+ + GTA + V  F D+S  + ++   L L   
Sbjct: 509 RSYKTTEELKKRFRIFRANMKKADYLQKTEQGTAKYGVTIFSDISSKEFKK-HYLGLKKR 567

Query: 114 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 173
             DI+   +     N T                 LPE +DWR    ++ VK QG C  CW
Sbjct: 568 TPDIKFKQEMAQIPNIT-----------------LPEEYDWRNYNAVTPVKNQGMCGSCW 610

Query: 174 AFSAVGVVEAMHAIQGNNLTELSVQ 198
           AFS  G +E  +AI+  NL  LS Q
Sbjct: 611 AFSVTGNIEGQYAIKTGNLVSLSEQ 635


>gi|356509908|ref|XP_003523684.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 366

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 148/317 (46%), Gaps = 62/317 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R   F  N+ +A+ +Q  D  +AV GV +F DL+
Sbjct: 45  LNAEHHFSAFKTKFAKTYATQEEHDHRFRIFKNNLLRAKSHQKLDP-SAVHGVTRFSDLT 103

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
            S+ + Q  GL       D Q +   P S                    DLP  FDWR  
Sbjct: 104 PSEFRGQFLGLKPLRLPSDAQKAPILPTS--------------------DLPTDFDWRDH 143

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNG 356
           G ++ VK QG C  CW+FSAVG +E  H +    L  LS QQLVDCD           + 
Sbjct: 144 GAVTGVKNQGSCGSCWSFSAVGALEGAHFLSTGGLVSLSEQQLVDCDHECDPEERGACDS 203

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M  A +Y +  GG++ ++ YPY     +RG    ++      V  +S +   +E
Sbjct: 204 GCNGGLMTTAFEYTLKAGGLMREEDYPYTG--RDRGPCKFDKSKIAASVANFSVVSL-DE 260

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV---------IDLNQRL--YGTSI-------- 457
           E++   +   GPL+VG+NA  +  Y GGV         +D    L  YG+          
Sbjct: 261 EQIAANLVKNGPLAVGINAVFMQTYIGGVSCPYICGKHLDHGVLLVGYGSGAYAPIRFKE 320

Query: 458 -PYWIVKNSWGSDWGEK 473
            PYWI+KNSWG  WGE+
Sbjct: 321 KPYWIIKNSWGESWGEE 337



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 29/172 (16%)

Query: 498 LSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           L  L+ ++LVDCD           + GCNGG M  A +Y +  GG++ ++ YPY   +  
Sbjct: 178 LVSLSEQQLVDCDHECDPEERGACDSGCNGGLMTTAFEYTLKAGGLMREEDYPYTGRD-- 235

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
           RG    ++      V  +S +   +EE++   +   GPL+VG+NA  +  Y GGV     
Sbjct: 236 RGPCKFDKSKIAASVANFSVVSL-DEEQIAANLVKNGPLAVGINAVFMQTYIGGVS--CP 292

Query: 609 RLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGEK 652
            +C  K  +H +++VGYG         +EK      PYWI+KNSWG  WGE+
Sbjct: 293 YICG-KHLDHGVLLVGYGSGAYAPIRFKEK------PYWIIKNSWGESWGEE 337



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 22/156 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F     K Y++ E+   R   F  N+ +A+ +Q+ D  +AV  V +F DL+ S+ +
Sbjct: 50  HFSAFKTKFAKTYATQEEHDHRFRIFKNNLLRAKSHQKLDP-SAVHGVTRFSDLTPSEFR 108

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  GL       D Q +   P S                    DLP  FDWR  G ++ 
Sbjct: 109 GQFLGLKPLRLPSDAQKAPILPTS--------------------DLPTDFDWRDHGAVTG 148

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CW+FSAVG +E  H +    L  LS Q
Sbjct: 149 VKNQGSCGSCWSFSAVGALEGAHFLSTGGLVSLSEQ 184


>gi|296090463|emb|CBI40282.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 119/199 (59%), Gaps = 18/199 (9%)

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
           S R G+DLPE+ DWR +G +  VK+QG C  CWAFS +  VE ++ I    L  LS Q+L
Sbjct: 52  SFRAGEDLPESVDWREKGAVVPVKDQGNCGSCWAFSTIAAVEGINQIATGDLISLSEQEL 111

Query: 349 VDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
           VDCD S N GCNGG MD A ++II+NGG+ S++ YPY+A+++   C    +    V +  
Sbjct: 112 VDCDKSYNQGCNGGLMDYAFEFIINNGGIDSEEDYPYRAADTT--CDPNRKNARVVSIDG 169

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVI------DLNQRL----YGT 455
           Y  +P  +E  +KK VA + P+SV + A G  +  Y  GV        L+  +    YGT
Sbjct: 170 YEDVPQNDERSLKKAVANQ-PVSVAIEAGGRAFQLYQSGVFTGQCGTQLDHGVVAVGYGT 228

Query: 456 --SIPYWIVKNSWGSDWGE 472
             S+ YWIV+NSWG +WGE
Sbjct: 229 ENSVDYWIVRNSWGPNWGE 247



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 15/157 (9%)

Query: 498 LSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPY+A+++   C    +
Sbjct: 103 LISLSEQELVDCDKSYNQGCNGGLMDYAFEFIINNGGIDSEEDYPYRAADTT--CDPNRK 160

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPK 614
               V +  Y  +P  +E  +KK VA + P+SV + A G  +  Y  GV       C  +
Sbjct: 161 NARVVSIDGYEDVPQNDERSLKKAVANQ-PVSVAIEAGGRAFQLYQSGVFTGQ---CGTQ 216

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +H ++ VGYG E      S+ YWIV+NSWG +WGE
Sbjct: 217 L-DHGVVAVGYGTE-----NSVDYWIVRNSWGPNWGE 247



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 17/130 (13%)

Query: 141 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH- 199
           S R G+DLPE+ DWR +G +  VK+QG C  CWAFS +  VE ++ I   +L  LS Q  
Sbjct: 52  SFRAGEDLPESVDWREKGAVVPVKDQGNCGSCWAFSTIAAVEGINQIATGDLISLSEQEL 111

Query: 200 --HDKVYSSVED--LLRRHENFVTN---VEKAEDYQSEDSGTA---------VFGVNKFF 243
              DK Y+   +  L+     F+ N   ++  EDY    + T          V  ++ + 
Sbjct: 112 VDCDKSYNQGCNGGLMDYAFEFIINNGGIDSEEDYPYRAADTTCDPNRKNARVVSIDGYE 171

Query: 244 DLSESDLQQL 253
           D+ ++D + L
Sbjct: 172 DVPQNDERSL 181


>gi|38346003|emb|CAD40112.2| OSJNBa0035O13.5 [Oryza sativa Japonica Group]
 gi|125589427|gb|EAZ29777.1| hypothetical protein OsJ_13835 [Oryza sativa Japonica Group]
          Length = 339

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 158/314 (50%), Gaps = 53/314 (16%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF--GVNKFFDLSESDLQQLT 254
           ++ + +VY    +  RR E F  NV   E +   ++G   F  GVN+F DL+  + +   
Sbjct: 41  MEQYGRVYKDATEKARRFEIFKANVAFIESF---NAGNHKFWLGVNQFADLTNYEFRAT- 96

Query: 255 GLNLDSTLEDIQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                 T +   PS ++ P +          F++ ++   D LP   DWR +G ++ +K+
Sbjct: 97  -----KTNKGFIPSTVRVPTT----------FRYENVSI-DTLPATVDWRTKGAVTPIKD 140

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYII 371
           QG+C CCWAFSAV  +E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II
Sbjct: 141 QGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFII 200

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
            NGG+ ++  YPY A++ +  C  G        +K Y  +P   E  + K VA + P+SV
Sbjct: 201 KNGGLTTESKYPYTAADGK--CNGGSNSA--ATIKGYEDVPANNEAALMKAVANQ-PVSV 255

Query: 432 GMNANGLF--YYSGGVI------DLNQRLY-------GTSIPYWIVKNSWGSDWGEK--- 473
            ++   +   +YSGGV+      DL+  +        G    YW++KNSWG+ WGE    
Sbjct: 256 AVDGGDMTFQFYSGGVMTGSCGTDLDHGIVAIGYGKDGDGTQYWLLKNSWGTTWGENGFL 315

Query: 474 -----VEDKVGSSG 482
                + DK G  G
Sbjct: 316 RMEKDISDKRGMCG 329



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+ ++  YPY A++ +  C  G
Sbjct: 166 KLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTESKYPYTAADGK--CNGG 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P   E  + K VA + P+SV ++   +   +YSGGV+  +   C 
Sbjct: 224 SNSA--ATIKGYEDVPANNEAALMKAVANQ-PVSVAVDGGDMTFQFYSGGVMTGS---CG 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H ++ +GYG    KDG    YW++KNSWG+ WGE   L
Sbjct: 278 TDL-DHGIVAIGYG----KDGDGTQYWLLKNSWGTTWGENGFL 315



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 23/160 (14%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF--EVNKFFDLSD 99
           V R   +M  + +VY    +  RR E F  NV   E +   ++G   F   VN+F DL++
Sbjct: 34  VARHERWMEQYGRVYKDATEKARRFEIFKANVAFIESF---NAGNHKFWLGVNQFADLTN 90

Query: 100 SDLQQLTGLNLDSTLEDIQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 158
            + +         T +   PS ++ P +          F++ ++   D LP   DWR +G
Sbjct: 91  YEFRAT------KTNKGFIPSTVRVPTT----------FRYENVSI-DTLPATVDWRTKG 133

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            ++ +K+QG+C CCWAFSAV  +E +  +    L  LS Q
Sbjct: 134 AVTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQ 173


>gi|44844204|emb|CAF32698.1| cysteine proteinase [Leishmania infantum]
          Length = 443

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 174/375 (46%), Gaps = 47/375 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK  G C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKXXGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN--GGVV 377
           CWAFSAVG +E+  A  G+ L  LS QQLV CD  + GCNGG M  A + ++ +  G V 
Sbjct: 150 CWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEXLLRHMYGIVF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   CL   +     ++  Y  IP   E  M  W+A  GP+++ ++A+
Sbjct: 210 TEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDAS 268

Query: 437 GLFYYSGGVID------LNQ--RLYGTS----IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN    L G +    +PYW++KNSWG DWGEK  V   +G + 
Sbjct: 269 SFMSYQSGVLTSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVVMGXNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM-SNGGCNGGRMDDALQYI 528
               +   +  +P  L+             R+  E+++  DM    GC    +   + Y 
Sbjct: 329 CLLXEXPXSAHVPRSLTPGPGTESEERAPKRVTVEQMMCTDMYCREGCKKSLLTANVCYK 388

Query: 529 IDNGGVVSDQAYPYK 543
              GG    +  P K
Sbjct: 389 NGGGGSSMTKCGPQK 403



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L  L+ ++LV CD  + GCNGG M  A + ++ +  G V ++++YPY +   +   CL  
Sbjct: 170 LVSLSEQQLVSCDDKDNGCNGGLMLQAFEXLLRHMYGIVFTEKSYPYTSGNGDVAECLNS 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +     ++  Y  IP   E  M  W+A  GP+++ ++A+    Y  GV+      C   
Sbjct: 230 SKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDASSFMSYQSGVLTS----CAGD 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A NH +++VGY     K G  +PYW++KNSWG DWGEK
Sbjct: 285 ALNHGVLLVGY----NKTG-GVPYWVIKNSWGEDWGEK 317



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 29/212 (13%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH----HDK--------V 203
            +G ++ VK  G C  CWAFSAVG +E+  A  G+ L  LS Q      DK        +
Sbjct: 134 EKGAVTPVKXXGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLM 193

Query: 204 YSSVEDLLRRHENFVTNVEKAEDYQSEDSGTA 235
             + E LL RH   +   EK+  Y S +   A
Sbjct: 194 LQAFEXLL-RHMYGIVFTEKSYPYTSGNGDVA 224


>gi|356515056|ref|XP_003526217.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 342

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 36/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + +VY    +  +R + F  NV   E + +         +N+F DL++ + + L   
Sbjct: 41  MAQYGRVYKDAAEKEKRFQVFKNNVHFIESFNAAGDKPFNLSINQFADLNDEEFKAL--- 97

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                L ++Q       +S QT     +F++ S+     +P   DWR  G ++ +K+QG+
Sbjct: 98  -----LINVQKKASWVETSTQT-----SFRYESV---TKIPATIDWRKRGAVTPIKDQGR 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG-GCNGGRMDDALQYIIDNGG 375
           C  CWAFSAV   E +H I    L  LS Q+LVDC      GC GG +DDA ++I   GG
Sbjct: 145 CGSCWAFSAVAATEGIHQITTGKLVPLSEQELVDCVKGESEGCIGGYVDDAFEFIAKKGG 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + S+  YPYK     + C V +E     ++K Y ++P   E+ + K VA + P+SV ++A
Sbjct: 205 IASETHYPYKG--VNKTCKVKKETHGVAEIKGYEKVPSNNEKALLKAVANQ-PVSVYIDA 261

Query: 436 --NGLFYYSGGVI-------DLNQRL----YGTSI---PYWIVKNSWGSDWGEK 473
             +   YYS G+        D N  +    YG ++    YW+VKNSWG++WGE+
Sbjct: 262 GTHAFKYYSSGIFNVRNCGTDPNHAVAVVGYGKALDGSKYWLVKNSWGTEWGER 315



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 95/163 (58%), Gaps = 13/163 (7%)

Query: 493 VLPSKLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   KL  L+ ++LVDC      GC GG +DDA ++I   GG+ S+  YPYK     + C
Sbjct: 163 ITTGKLVPLSEQELVDCVKGESEGCIGGYVDDAFEFIAKKGGIASETHYPYKG--VNKTC 220

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQR 609
            V +E     ++K Y ++P   E+ + K VA + P+SV ++A  +   YYS G+ ++   
Sbjct: 221 KVKKETHGVAEIKGYEKVPSNNEKALLKAVANQ-PVSVYIDAGTHAFKYYSSGIFNVRNC 279

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +P   NHA+ +VGYG+    DG+   YW+VKNSWG++WGE+
Sbjct: 280 GTDP---NHAVAVVGYGKA--LDGSK--YWLVKNSWGTEWGER 315



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 17/183 (9%)

Query: 16  YLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           YL  F++ +++  S++   R        R   +M  + +VY    +  +R + F  NV  
Sbjct: 9   YLILFLV-LSVWTSHVMSRRLSEACTSERHEKWMAQYGRVYKDAAEKEKRFQVFKNNVHF 67

Query: 76  AEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMR 135
            E +           +N+F DL+D + + L        L ++Q       +S QT     
Sbjct: 68  IESFNAAGDKPFNLSINQFADLNDEEFKAL--------LINVQKKASWVETSTQT----- 114

Query: 136 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTEL 195
           +F++ S+     +P   DWR  G ++ +K+QG+C  CWAFSAV   E +H I    L  L
Sbjct: 115 SFRYESV---TKIPATIDWRKRGAVTPIKDQGRCGSCWAFSAVAATEGIHQITTGKLVPL 171

Query: 196 SVQ 198
           S Q
Sbjct: 172 SEQ 174


>gi|328876826|gb|EGG25189.1| hypothetical protein DFA_03437 [Dictyostelium fasciculatum]
          Length = 341

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 137/287 (47%), Gaps = 38/287 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H+K+Y   E+   R  NF+ N+   E    +   TA FG+NKF DLS             
Sbjct: 39  HNKMYHEEEEFYLRLSNFIRNIHSIEKMNRQYGRTATFGLNKFSDLS------------- 85

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
             L++ +     P    +       F + S     ++P   DWR +G ++ VK Q  C  
Sbjct: 86  --LDEFKKHYLMPNYKPKARVTKETFNYPS-----NIPATLDWRTKGYVTPVKNQLMCGS 138

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFSA   +E  + + G  +  LS QQ+VDCD  +GGC GG    A QY+ +NGG+  +
Sbjct: 139 CWAFSATEQIETANIMAGGQVEYLSEQQIVDCDPYDGGCGGGDPYTAYQYVQNNGGLTLN 198

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRI-PYGEEEEMKKWVATRGPLSVGMNANGL 438
             YPY A+    G          V+V  +      G E ++++ +A RGPLS+ +NA   
Sbjct: 199 VTYPYTAAN---GACYANSTAPAVQVTAFGYASSQGNETQLREAMAARGPLSICVNAEPW 255

Query: 439 FYYSGGVI------DLNQ--RLYG------TSIPYWIVKNSWGSDWG 471
             Y  G+       DL+   ++ G      +  PY+IV+NSWG+DWG
Sbjct: 256 MSYQSGIFSSTCSDDLDHCVQIVGYDTDATSKTPYFIVRNSWGTDWG 302



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 14/169 (8%)

Query: 485 TRDLELTGVLPS-KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 543
           T  +E   ++   ++  L+ +++VDCD  +GGC GG    A QY+ +NGG+  +  YPY 
Sbjct: 145 TEQIETANIMAGGQVEYLSEQQIVDCDPYDGGCGGGDPYTAYQYVQNNGGLTLNVTYPYT 204

Query: 544 ASESERGCLVGEEEGFKVKVKEYSRI-PYGEEEEMKKWVATRGPLSVGMNANGLFYYSGG 602
           A+    G          V+V  +      G E ++++ +A RGPLS+ +NA     Y  G
Sbjct: 205 AAN---GACYANSTAPAVQVTAFGYASSQGNETQLREAMAARGPLSICVNAEPWMSYQSG 261

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWG 650
           +       C+    +H + IVGY      D TS  PY+IV+NSWG+DWG
Sbjct: 262 IFS---STCSDDL-DHCVQIVGY----DTDATSKTPYFIVRNSWGTDWG 302



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 20/157 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
            TRF  +M +H+K+Y   E+   R  NF+ N+   E   R+   TA F +NKF DLS   
Sbjct: 29  TTRFKTWMVEHNKMYHEEEEFYLRLSNFIRNIHSIEKMNRQYGRTATFGLNKFSDLS--- 85

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                       L++ +     P    +       F + S     ++P   DWR +G ++
Sbjct: 86  ------------LDEFKKHYLMPNYKPKARVTKETFNYPS-----NIPATLDWRTKGYVT 128

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK Q  C  CWAFSA   +E  + + G  +  LS Q
Sbjct: 129 PVKNQLMCGSCWAFSATEQIETANIMAGGQVEYLSEQ 165


>gi|148927382|gb|ABR19827.1| cysteine proteinase [Elaeis guineensis]
          Length = 470

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 160/299 (53%), Gaps = 36/299 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSES 248
           L E  +  H + Y+++ +  RR E F  NV   + + +  D+G   F  G+N+F D++  
Sbjct: 49  LYEGWLAKHGRAYNALGEKERRFEIFKDNVLFIDAHNAAADAGHRSFRLGLNRFADMTNE 108

Query: 249 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 308
           + +        +     +P+     +   +D     +++N+   G+DLPE+ DWRA+G +
Sbjct: 109 EYR--------AVYLGTRPAGHRRRARVGSDR----YRYNA---GEDLPESVDWRAKGAV 153

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDAL 367
           + VK+QG C  CWAFS V  VE ++ I    L  LS Q+LVDCD   N GCNGG MD   
Sbjct: 154 AAVKDQGSCGSCWAFSTVAAVEGINKIVTGDLISLSEQELVDCDNGYNQGCNGGLMDYGF 213

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           ++II+NGG+ +++ YPY A + +  C    +    V +  Y  +P  +E+ ++K VA + 
Sbjct: 214 EFIINNGGIDTEEDYPYTARDGK--CDQYRKNAKVVSIDGYEDVPVNDEKALQKAVANQ- 270

Query: 428 PLSVGMNANGL---FYYSGGV-----IDLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           P+SV + A G     Y+SG        DL+  +    YGT     YWIV+NSWG DWGE
Sbjct: 271 PVSVAIEAGGREFQLYHSGIFTGRCGTDLDHGVVAVGYGTENGKDYWIVRNSWGGDWGE 329



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 17/166 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD   N GCNGG MD   ++II+NGG+ +++ YPY A + +
Sbjct: 177 INKIVTGDLISLSEQELVDCDNGYNQGCNGGLMDYGFEFIINNGGIDTEEDYPYTARDGK 236

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVID 605
             C    +    V +  Y  +P  +E+ ++K VA + P+SV + A G     Y+SG    
Sbjct: 237 --CDQYRKNAKVVSIDGYEDVPVNDEKALQKAVANQ-PVSVAIEAGGREFQLYHSG---- 289

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +    C     +H ++ VGYG E  KD     YWIV+NSWG DWGE
Sbjct: 290 IFTGRCGTDL-DHGVVAVGYGTENGKD-----YWIVRNSWGGDWGE 329



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 18/157 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  ++  H + Y+++ +  RR E F  NV   + +    D+G   F +  N+F D+++ +
Sbjct: 50  YEGWLAKHGRAYNALGEKERRFEIFKDNVLFIDAHNAAADAGHRSFRLGLNRFADMTNEE 109

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +        +     +P+     +   +D     +++N+   G+DLPE+ DWRA+G ++
Sbjct: 110 YR--------AVYLGTRPAGHRRRARVGSDR----YRYNA---GEDLPESVDWRAKGAVA 154

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CWAFS V  VE ++ I   +L  LS Q
Sbjct: 155 AVKDQGSCGSCWAFSTVAAVEGINKIVTGDLISLSEQ 191


>gi|294462776|gb|ADE76932.1| unknown [Picea sitchensis]
          Length = 403

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 153/321 (47%), Gaps = 52/321 (16%)

Query: 182 EAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNK 241
           E +  ++   L +  +  H KVYS++E+ +RR   F  N+ KA + Q+ D  TAV G+  
Sbjct: 79  EHLLNLRSKTLFDKFIVEHGKVYSTIEEYVRRLRIFEKNLLKAAENQALDP-TAVHGITP 137

Query: 242 FFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 301
           F DL+E + +        S    +    Q   +  QT   +           DDLP  FD
Sbjct: 138 FSDLTEYEFE--------SRYTGLLGVRQGLVNEKQTAEILPV---------DDLPANFD 180

Query: 302 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--------- 352
           WR +G +++VK QG C  CWAFS  GVVE  + +    L  LS QQL+DCD         
Sbjct: 181 WREKGAVTEVKTQGNCGSCWAFSTTGVVEGANFLATGKLLNLSEQQLIDCDHKCDPLNTK 240

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GC+GG M +A  Y+++ GG+   + YPY   + +  C    +    VK   ++ + 
Sbjct: 241 ACDNGCHGGLMTNAYNYLMEAGGIEEAKNYPYTGVQGD--CKFNPDLA-AVKAINFTTVN 297

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQRLYGTSI------------ 457
             +E+++   +   GPL+VG+NA  +  Y GGV   +  ++R     +            
Sbjct: 298 L-DEKQIAANLVKHGPLAVGLNAAFMQTYIGGVSCPLICSKRFINHGVLLVGYGHKGFAL 356

Query: 458 ------PYWIVKNSWGSDWGE 472
                 PYWI+KNSWG  WGE
Sbjct: 357 LRLGYRPYWIIKNSWGKRWGE 377



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 35/208 (16%)

Query: 469 DWGEK---VEDKVGSSGNRTRDLELTGVL-------PSKLSRLATEKLVDCD-------- 510
           DW EK    E K   +         TGV+         KL  L+ ++L+DCD        
Sbjct: 180 DWREKGAVTEVKTQGNCGSCWAFSTTGVVEGANFLATGKLLNLSEQQLIDCDHKCDPLNT 239

Query: 511 -MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI 569
              + GC+GG M +A  Y+++ GG+   + YPY   + +  C    +    VK   ++ +
Sbjct: 240 KACDNGCHGGLMTNAYNYLMEAGGIEEAKNYPYTGVQGD--CKFNPDLA-AVKAINFTTV 296

Query: 570 PYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEE 629
              +E+++   +   GPL+VG+NA  +  Y GGV      +C+ +  NH +++VGYG + 
Sbjct: 297 NL-DEKQIAANLVKHGPLAVGLNAAFMQTYIGGVS--CPLICSKRFINHGVLLVGYGHK- 352

Query: 630 KKDGTSI------PYWIVKNSWGSDWGE 651
              G ++      PYWI+KNSWG  WGE
Sbjct: 353 ---GFALLRLGYRPYWIIKNSWGKRWGE 377



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 76/157 (48%), Gaps = 18/157 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           T F  F+ +H KVYS++E+ +RR   F  N+ KA + Q  D  TAV  +  F DL++ + 
Sbjct: 88  TLFDKFIVEHGKVYSTIEEYVRRLRIFEKNLLKAAENQALDP-TAVHGITPFSDLTEYEF 146

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +        S    +    Q   +  QT   +           DDLP  FDWR +G +++
Sbjct: 147 E--------SRYTGLLGVRQGLVNEKQTAEILPV---------DDLPANFDWREKGAVTE 189

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK QG C  CWAFS  GVVE  + +    L  LS Q 
Sbjct: 190 VKTQGNCGSCWAFSTTGVVEGANFLATGKLLNLSEQQ 226


>gi|9502421|gb|AAF88120.1|AC021043_13 Putative cysteine proteinase [Arabidopsis thaliana]
          Length = 331

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 156/309 (50%), Gaps = 54/309 (17%)

Query: 195 LSVQHH-------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSE 247
           +  +HH        +VYS   +   R + F  N++  E +  +   T   GVN+F D + 
Sbjct: 18  IVAEHHQQWMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTR 77

Query: 248 SD-------LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAF 300
            +       L+ + G+     ++++ PS    ++ N +D   R              E  
Sbjct: 78  EEFIATHTGLKGVNGIPSSEFVDEMIPS----WNWNVSDVAGR--------------ETK 119

Query: 301 DWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCN 359
           DWR EG ++ VK QG+C CCWAFS+V  VE +  I GN+L  LS QQL+DCD   + GCN
Sbjct: 120 DWRYEGAVTPVKYQGQCGCCWAFSSVAAVEGLTKIVGNNLVSLSEQQLLDCDRERDNGCN 179

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG M DA  YII N G+ S+ +YPY+A+E    C    +      ++ +  +P   E  +
Sbjct: 180 GGIMSDAFSYIIKNRGIASEASYPYQAAEGT--CRYNGKP--SAWIRGFQTVPSNNERAL 235

Query: 420 KKWVATRGPLSVGMNAN--GLFYYSGGVID-------LNQRL----YGTS---IPYWIVK 463
            + V ++ P+SV ++A+  G  +YSGGV D       +N  +    YGTS   I YW+ K
Sbjct: 236 LEAV-SKQPVSVSIDADGPGFMHYSGGVYDEPYCGTNVNHAVTFVGYGTSPEGIKYWLAK 294

Query: 464 NSWGSDWGE 472
           NSWG  WGE
Sbjct: 295 NSWGETWGE 303



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           LT ++ + L  L+ ++L+DCD   + GCNGG M DA  YII N G+ S+ +YPY+A+E  
Sbjct: 151 LTKIVGNNLVSLSEQQLLDCDRERDNGCNGGIMSDAFSYIIKNRGIASEASYPYQAAEGT 210

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDL 606
             C    +      ++ +  +P   E  + + V ++ P+SV ++A+  G  +YSGGV D 
Sbjct: 211 --CRYNGKP--SAWIRGFQTVPSNNERALLEAV-SKQPVSVSIDADGPGFMHYSGGVYD- 264

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +  C     NHA+  VGYG   +     I YW+ KNSWG  WGE
Sbjct: 265 -EPYCGTNV-NHAVTFVGYGTSPE----GIKYWLAKNSWGETWGE 303



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 25/159 (15%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKF-------FDLSDS 100
           +M    +VYS   +   R + F  N++  E + ++   T    VN+F       F  + +
Sbjct: 26  WMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTREEFIATHT 85

Query: 101 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            L+ + G+     ++++ PS    ++ N +D   R              E  DWR EG +
Sbjct: 86  GLKGVNGIPSSEFVDEMIPS----WNWNVSDVAGR--------------ETKDWRYEGAV 127

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + VK QG+C CCWAFS+V  VE +  I GNNL  LS Q 
Sbjct: 128 TPVKYQGQCGCCWAFSSVAAVEGLTKIVGNNLVSLSEQQ 166


>gi|60100207|gb|AAX13273.1| putative cysteine protease [Oryza sativa Japonica Group]
          Length = 349

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 149/295 (50%), Gaps = 36/295 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H + Y+   +  RR E F  NV   E      S  A    +KF+ L E+    LT  
Sbjct: 44  MAKHGRAYADDAEKARRLEVFRDNVAFIE------SVNAAASQHKFW-LEENQFADLTNA 96

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              +T   ++PS      S++ +    +F++ ++  GD LP + DWR +G ++ VK+QG 
Sbjct: 97  EFRATRTGLRPS------SSRGNRAPTSFRYANVSTGD-LPASVDWRGKGAVNPVKDQGD 149

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV  +E    +    L  LS QQLV CD+   + GC GG MDDA  +II NG
Sbjct: 150 CGCCWAFSAVAAMEGAVKLATGKLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNG 209

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPY AS+ +  C           +K Y  +P  +E  + K VA + P+SV ++
Sbjct: 210 GLAAESDYPYTASDDK--CATAGAGAAAATIKGYEDVPANDEAALLKAVANQ-PVSVAID 266

Query: 435 ANG--LFYYSGGVI--------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
                  +Y GGV+        +L+  +    YG +     YW++KNSWG+ WGE
Sbjct: 267 GGDRHFQFYKGGVLSGAAGCATELDHAITAVGYGVASDGTKYWLMKNSWGTSWGE 321



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LV CD+   + GC GG MDDA  +II NGG+ ++  YPY AS+ +  C   
Sbjct: 172 KLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNGGLAAESDYPYTASDDK--CATA 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
                   +K Y  +P  +E  + K VA + P+SV ++       +Y GGV  L+     
Sbjct: 230 GAGAAAATIKGYEDVPANDEAALLKAVANQ-PVSVAIDGGDRHFQFYKGGV--LSGAAGC 286

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               +HA+  VGYG     DGT   YW++KNSWG+ WGE
Sbjct: 287 ATELDHAITAVGYG--VASDGTK--YWLMKNSWGTSWGE 321



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 14/156 (8%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  H + Y+   +  RR E F  NV   E      S  A    +KF+ L ++   
Sbjct: 39  RHERWMAKHGRAYADDAEKARRLEVFRDNVAFIE------SVNAAASQHKFW-LEENQFA 91

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            LT     +T   ++PS      S++ +    +F++ ++  GD LP + DWR +G ++ V
Sbjct: 92  DLTNAEFRATRTGLRPS------SSRGNRAPTSFRYANVSTGD-LPASVDWRGKGAVNPV 144

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG C CCWAFSAV  +E    +    L  LS Q 
Sbjct: 145 KDQGDCGCCWAFSAVAAMEGAVKLATGKLVSLSEQQ 180


>gi|220983358|dbj|BAH11164.1| cysteine protease [Hordeum vulgare]
          Length = 462

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 154/298 (51%), Gaps = 39/298 (13%)

Query: 193 TELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESD 249
            E   +HH   Y+ + +  RR E F  N+   + + +  D+G   F  G+N+F DL+  +
Sbjct: 43  AEWMAEHH-STYNPIGEEERRFEAFRNNLRYIDQHNAAADAGVHSFRLGLNRFADLTNEE 101

Query: 250 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
            +  T L    T  D +  L A + +   D               +LPE+ DWR +G + 
Sbjct: 102 YRS-TYLGA-RTKPDRERKLSARYQAADND---------------ELPESVDWRKKGAVG 144

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQ 368
            VK+QG C  CWAFSA+  VE ++ I    +  LS Q+LVDCD S N GCNGG MD A +
Sbjct: 145 AVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDTSYNQGCNGGLMDYAFE 204

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
           +II+NGG+ S++ YPYK  E +  C   ++    V +  Y  +P   E+ ++K VA + P
Sbjct: 205 FIINNGGIDSEEDYPYK--ERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQ-P 261

Query: 429 LSVGMNANGLFY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           +SV + A G  +  Y  G+        L+  +    YGT     YW+V+NSWGS WGE
Sbjct: 262 ISVAIEAGGRAFQLYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGSVWGE 319



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   +  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPYK  E +  C
Sbjct: 170 IVTGDMIPLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDSEEDYPYK--ERDNRC 227

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
              ++    V +  Y  +P   E+ ++K VA + P+SV + A G  +  Y  G+      
Sbjct: 228 DANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQ-PISVAIEAGGRAFQLYKSGIF---TG 283

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YW+V+NSWGS WGE
Sbjct: 284 TCG-TALDHGVAAVGYGTENGKD-----YWLVRNSWGSVWGE 319



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 20/157 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +M +H   Y+ + +  RR E F  N+   + +    D+G   F +  N+F DL++ +
Sbjct: 42  YAEWMAEHHSTYNPIGEEERRFEAFRNNLRYIDQHNAAADAGVHSFRLGLNRFADLTNEE 101

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +  T L    T  D +  L A + +   D               +LPE+ DWR +G + 
Sbjct: 102 YRS-TYLGA-RTKPDRERKLSARYQAADND---------------ELPESVDWRKKGAVG 144

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CWAFSA+  VE ++ I   ++  LS Q
Sbjct: 145 AVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQ 181


>gi|356517350|ref|XP_003527350.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
 gi|356577765|ref|XP_003556993.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 343

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 157/322 (48%), Gaps = 42/322 (13%)

Query: 172 CWAFSAVGVVEAMHAIQGNNLTELSVQ---HHDKVYSSVEDLLRRHENFVTNVEKAEDYQ 228
           C  F A  V  A   +Q  ++ E   Q    + KVY   E+  +R   F  NV   E + 
Sbjct: 17  CLGFLAFQV--ASRTLQDASMYERHEQWMARYGKVYKDPEEKEKRFRVFKENVNYIEAFN 74

Query: 229 SEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN 288
           +  +     G+N+F DL+  +               I P  +    +  ++T    F++ 
Sbjct: 75  NAANKPYKLGINQFADLTSEEF--------------IVPRNRFNGHTRSSNTRTTTFKYE 120

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
           ++     LP++ DWR +G ++ +K QG C CCWAFSA+   E +H I    L  LS Q++
Sbjct: 121 NV---TVLPDSIDWRQKGAVTPIKNQGSCGCCWAFSAIAATEGIHKISTGKLVSLSEQEV 177

Query: 349 VDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           VDCD   ++ GC GG MD A ++II N G+ ++ +YPYK  + +  C + EE      + 
Sbjct: 178 VDCDTKGTDHGCEGGYMDGAFKFIIQNHGINTEASYPYKGVDGK--CNIKEEAVHAATIT 235

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSG------------GVIDLNQR 451
            Y  +P   E+ ++K VA + P+SV ++A+G    FY SG            GV  +   
Sbjct: 236 GYEDVPINNEKALQKAVANQ-PVSVAIDASGADFQFYKSGIFTGSCGTELDHGVTAVGYG 294

Query: 452 LYGTSIPYWIVKNSWGSDWGEK 473
                  YW+VKNSWG++WGE+
Sbjct: 295 ENNEGTKYWLVKNSWGTEWGEE 316



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 94/161 (58%), Gaps = 17/161 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ +++VDCD   ++ GC GG MD A ++II N G+ ++ +YPYK  + +  C + 
Sbjct: 168 KLVSLSEQEVVDCDTKGTDHGCEGGYMDGAFKFIIQNHGINTEASYPYKGVDGK--CNIK 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLNQRLC 611
           EE      +  Y  +P   E+ ++K VA + P+SV ++A+G    FY SG    +    C
Sbjct: 226 EEAVHAATITGYEDVPINNEKALQKAVANQ-PVSVAIDASGADFQFYKSG----IFTGSC 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +  +H +  VGYG  E  +GT   YW+VKNSWG++WGE+
Sbjct: 281 GTEL-DHGVTAVGYG--ENNEGTK--YWLVKNSWGTEWGEE 316



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   E+  +R   F  NV   E +    +      +N+F DL+  +  
Sbjct: 38  RHEQWMARYGKVYKDPEEKEKRFRVFKENVNYIEAFNNAANKPYKLGINQFADLTSEEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +    +  ++T    F++ ++     LP++ DWR +G ++ +
Sbjct: 97  -------------IVPRNRFNGHTRSSNTRTTTFKYENV---TVLPDSIDWRQKGAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C CCWAFSA+   E +H I    L  LS Q
Sbjct: 141 KNQGSCGCCWAFSAIAATEGIHKISTGKLVSLSEQ 175


>gi|351701945|gb|EHB04864.1| Cathepsin W [Heterocephalus glaber]
          Length = 373

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 153/309 (49%), Gaps = 57/309 (18%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDS 260
           +K YS+  +  RR + FV N+  A+  Q ED GTA FGV  F DL+E +  QL G N  +
Sbjct: 50  NKSYSNPAEHARRLDIFVHNLAMAQRLQEEDLGTAEFGVTPFSDLTEEEFGQLYG-NWRA 108

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR-AEGVISKVKEQGKCAC 319
             +D++   +  F   +                  +P + DWR A  +IS VK QGKC C
Sbjct: 109 AKKDLRVGRKVRFEKQEL-----------------IPPSCDWRKAPNIISPVKYQGKCNC 151

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWA +A G +EA+  I+     E+SVQ+L+DC     GC GG + DA   +++  G+ S+
Sbjct: 152 CWAIAAAGNIEALWNIRFKQSVEVSVQELLDCGRCGDGCLGGYVWDAFITVLNYSGLASE 211

Query: 380 QAYPYKASESERGCLVGEEEGFKVK-VKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           + Y ++   +   CL    +  KV  +++Y  +P   E  M ++VAT+GP++V +N   L
Sbjct: 212 KDYRFRGRANIHRCLAPFYK--KVAWIQDYVMLPR-NEHTMARYVATQGPITVLINQMLL 268

Query: 439 FYYSGGVI--------------------------------DLNQ--RLYGTSIPYWIVKN 464
            +Y  G+I                                DL+Q   L   S PYWI+KN
Sbjct: 269 QHYRQGIIRATPSTCDPWLVNHYVLLVGFGKEEEKKGSEKDLSQSNHLPRHSTPYWILKN 328

Query: 465 SWGSDWGEK 473
           SWG+ WGE+
Sbjct: 329 SWGAHWGEQ 337



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 17/166 (10%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           ++ ++L+DC     GC GG + DA   +++  G+ S++ Y ++   +   CL    +  K
Sbjct: 175 VSVQELLDCGRCGDGCLGGYVWDAFITVLNYSGLASEKDYRFRGRANIHRCLAPFYK--K 232

Query: 561 VK-VKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHA 619
           V  +++Y  +P   E  M ++VAT+GP++V +N   L +Y  G+I      C+P   NH 
Sbjct: 233 VAWIQDYVMLPR-NEHTMARYVATQGPITVLINQMLLQHYRQGIIRATPSTCDPWLVNHY 291

Query: 620 LIIVGYGEEEKKDGT-------------SIPYWIVKNSWGSDWGEK 652
           +++VG+G+EE+K G+             S PYWI+KNSWG+ WGE+
Sbjct: 292 VLLVGFGKEEEKKGSEKDLSQSNHLPRHSTPYWILKNSWGAHWGEQ 337



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 19/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F    +K YS+  +  RR + FV N+  A+  Q ED GTA F V  F DL++ +  Q
Sbjct: 42  FKLFQIQFNKSYSNPAEHARRLDIFVHNLAMAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR-AEGVISKV 163
           L G N  +  +D++   +  F   +                  +P + DWR A  +IS V
Sbjct: 102 LYG-NWRAAKKDLRVGRKVRFEKQEL-----------------IPPSCDWRKAPNIISPV 143

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QGKC CCWA +A G +EA+  I+     E+SVQ
Sbjct: 144 KYQGKCNCCWAIAAAGNIEALWNIRFKQSVEVSVQ 178


>gi|432091081|gb|ELK24293.1| Cathepsin F, partial [Myotis davidii]
          Length = 410

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 150/299 (50%), Gaps = 39/299 (13%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           +L +  +  +++ Y + E+   R   F+ N+ +A+  Q+ D GTA +GV KF DL+E + 
Sbjct: 111 SLFKYFITTYNRTYETEEEAQWRMSVFINNMIRAQKIQALDRGTAQYGVTKFSDLTEEEF 170

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           + +  LN              P    +   +MR  +F     GD  P  +DWR +G ++K
Sbjct: 171 RTMY-LN--------------PLLKEELGKKMRLVKFV----GDPAPPEWDWRKKGAVTK 211

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYI 370
           VK QG C  CWAFS  G VE    ++   L  LS Q+LVDCD  +  C GG   +A   I
Sbjct: 212 VKNQGMCGSCWAFSVTGNVEGQWFLKRGDLLSLSEQELVDCDKVDKACMGGLPSNAYSAI 271

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
              GG+ ++  Y Y  S   + C    ++  KV + +   + +  E+E+  W+A  GP+S
Sbjct: 272 KTLGGLETEDDYSY--SGHLQTCSFSAQKA-KVYINDSVELSH-NEQELAAWLAKNGPIS 327

Query: 431 VGMNANGLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           + +NA G+ +Y  G+            ID    L G    + +P+W +KNSWG+DWGE+
Sbjct: 328 IAINAFGMQFYRHGISRPLRPLCSRWFIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEE 386



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 87/155 (56%), Gaps = 9/155 (5%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  +  C GG   +A   I   GG+ ++  Y Y  S   + C    ++
Sbjct: 241 LLSLSEQELVDCDKVDKACMGGLPSNAYSAIKTLGGLETEDDYSY--SGHLQTCSFSAQK 298

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
             KV + +   + +  E+E+  W+A  GP+S+ +NA G+ +Y  G+    + LC+    +
Sbjct: 299 A-KVYINDSVELSH-NEQELAAWLAKNGPISIAINAFGMQFYRHGISRPLRPLCSRWFID 356

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           HA+++VGYG       + +P+W +KNSWG+DWGE+
Sbjct: 357 HAVLLVGYGNR-----SDVPFWAIKNSWGTDWGEE 386



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 19/154 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F+  +++ Y + E+   R   F+ N+ +A+  Q  D GTA + V KF DL++ + + 
Sbjct: 113 FKYFITTYNRTYETEEEAQWRMSVFINNMIRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 172

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +  LN              P    +   +MR  +F     GD  P  +DWR +G ++KVK
Sbjct: 173 MY-LN--------------PLLKEELGKKMRLVKFV----GDPAPPEWDWRKKGAVTKVK 213

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G VE    ++  +L  LS Q
Sbjct: 214 NQGMCGSCWAFSVTGNVEGQWFLKRGDLLSLSEQ 247


>gi|56718883|gb|AAW28152.1| westerpain-10 [Paragonimus westermani]
          Length = 327

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 153/322 (47%), Gaps = 47/322 (14%)

Query: 172 CWAF---SAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQ 228
           C+A     A+ V           L E   + + KVY++ ED  +R   F  N+ +A+  Q
Sbjct: 8   CFALIVSCAIAVSAGRVPDSARELYEQFKRGYGKVYAN-EDDQKRFAIFKDNLVRAQKLQ 66

Query: 229 SEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN 288
            +D GTA +GV +F DL+  +                   L AP + +Q    MR     
Sbjct: 67  LKDQGTARYGVTQFSDLTPEEFAA--------------KYLSAPVNDDQVK-RMRPTGLK 111

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
           +       PE  DWRA+G ++ V+ QG C  CWAFS  G VE    I+   L  LS QQL
Sbjct: 112 AA------PERIDWRAKGAVTAVENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQL 165

Query: 349 VDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEY 408
           VDCD +  GCNGG    +   I+  GG+ S+  YPY     E+ C + +E   K+  K  
Sbjct: 166 VDCDRAAQGCNGGWPASSYLEIMYMGGLESESDYPYVG--VEQTCALNKE---KLVAKID 220

Query: 409 SRIPYG-EEEEMKKWVATRGPLSVGMNANGLFYYSGGVI----------DLNQRLYGTS- 456
             I  G EEE+   ++A  GPLS  +NA  L +Y  GV+          +LN  +     
Sbjct: 221 DSIVLGPEEEDHAAYLAEHGPLSTLLNAVALQHYQSGVLKPTFDECPDTELNHAVLTVGY 280

Query: 457 -----IPYWIVKNSWGSDWGEK 473
                +PYWI+KNSWG+DWGEK
Sbjct: 281 DKEGDMPYWIIKNSWGTDWGEK 302



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 87/157 (55%), Gaps = 11/157 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCD +  GCNGG    +   I+  GG+ S+  YPY   E  + C + +E
Sbjct: 156 QLVSLSKQQLVDCDRAAQGCNGGWPASSYLEIMYMGGLESESDYPYVGVE--QTCALNKE 213

Query: 557 EGFKVKVKEYSRIPYG-EEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
              K+  K    I  G EEE+   ++A  GPLS  +NA  L +Y  GV+      C    
Sbjct: 214 ---KLVAKIDDSIVLGPEEEDHAAYLAEHGPLSTLLNAVALQHYQSGVLKPTFDECPDTE 270

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NHA++ VGY +E       +PYWI+KNSWG+DWGEK
Sbjct: 271 LNHAVLTVGYDKE-----GDMPYWIIKNSWGTDWGEK 302



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 22/155 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           +  F R + KVY++ ED  +R   F  N+ +A+  Q +D GTA + V +F DL+  +   
Sbjct: 32  YEQFKRGYGKVYAN-EDDQKRFAIFKDNLVRAQKLQLKDQGTARYGVTQFSDLTPEEFAA 90

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                           L AP + +Q    MR     +       PE  DWRA+G ++ V+
Sbjct: 91  --------------KYLSAPVNDDQVK-RMRPTGLKAA------PERIDWRAKGAVTAVE 129

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG C  CWAFS  G VE    I+   L  LS Q 
Sbjct: 130 NQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQ 164


>gi|194352754|emb|CAQ00105.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326513690|dbj|BAJ87864.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326514532|dbj|BAJ96253.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 463

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 153/294 (52%), Gaps = 38/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQL 253
           +  H   Y+++ +  RR E F  N+   + + +  D+G   F  G+N+F DL+  + +  
Sbjct: 47  MAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAGVHSFRLGLNRFADLTNEEYRS- 105

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
           T L    T  D +  L A + +   D               +LPE+ DWR +G +  VK+
Sbjct: 106 TYLGA-RTKPDRERKLSARYQAADND---------------ELPESVDWRKKGAVGAVKD 149

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIID 372
           QG C  CWAFSA+  VE ++ I    +  LS Q+LVDCD S N GCNGG MD A ++II+
Sbjct: 150 QGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDTSYNQGCNGGLMDYAFEFIIN 209

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S++ YPYK  E +  C   ++    V +  Y  +P   E+ ++K VA + P+SV 
Sbjct: 210 NGGIDSEEDYPYK--ERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQ-PISVA 266

Query: 433 MNANGLFY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           + A G  +  Y  G+        L+  +    YGT     YW+V+NSWGS WGE
Sbjct: 267 IEAGGRAFQLYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGSVWGE 320



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   +  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPYK  E +  C
Sbjct: 171 IVTGDMIPLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDSEEDYPYK--ERDNRC 228

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
              ++    V +  Y  +P   E+ ++K VA + P+SV + A G  +  Y  G+      
Sbjct: 229 DANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQ-PISVAIEAGGRAFQLYKSGIF---TG 284

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YW+V+NSWGS WGE
Sbjct: 285 TCG-TALDHGVAAVGYGTENGKD-----YWLVRNSWGSVWGE 320



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 20/157 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +M +H   Y+++ +  RR E F  N+   + +    D+G   F +  N+F DL++ +
Sbjct: 43  YAEWMAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAGVHSFRLGLNRFADLTNEE 102

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +  T L    T  D +  L A + +   D               +LPE+ DWR +G + 
Sbjct: 103 YRS-TYLGA-RTKPDRERKLSARYQAADND---------------ELPESVDWRKKGAVG 145

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CWAFSA+  VE ++ I   ++  LS Q
Sbjct: 146 AVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQ 182


>gi|194883222|ref|XP_001975702.1| GG20414 [Drosophila erecta]
 gi|190658889|gb|EDV56102.1| GG20414 [Drosophila erecta]
          Length = 341

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 139/261 (53%), Gaps = 43/261 (16%)

Query: 237 FGVNKFFDLSESDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD 295
             VNK+ DL   + +QL  G N          +L     S  TD   +   F S  H   
Sbjct: 76  LAVNKYADLLHHEFRQLMNGFNY---------TLHKQLRS--TDDSFKGVTFISPAHVT- 123

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR +G ++ VK+QG C  CWAFS+ G +E  H  +   L  LS Q LVDC    
Sbjct: 124 LPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKY 183

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYS 409
            N GCNGG MD+A +YI DNGG+ ++++YPY+A +      +G +   + GF       +
Sbjct: 184 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGAIGATDRGF-------T 236

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI--------DLNQRL----YGT 455
            IP G+E++M + VAT GP++V ++A+     +YS GV         +L+  +    YGT
Sbjct: 237 DIPQGDEKKMAEAVATVGPVAVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGYGT 296

Query: 456 SIP---YWIVKNSWGSDWGEK 473
                 YW+VKNSWG+ WG+K
Sbjct: 297 DESGDDYWLVKNSWGTTWGDK 317



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 104/170 (61%), Gaps = 25/170 (14%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +GVL S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +  
Sbjct: 165 SGVLVS----LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDS 220

Query: 549 ----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGG 602
               +G +   + GF       + IP G+E++M + VAT GP++V ++A+     +YS G
Sbjct: 221 CHFNKGAIGATDRGF-------TDIPQGDEKKMAEAVATVGPVAVAIDASHESFQFYSEG 273

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           V   N+  C+ +  +H +++VGYG +E  D     YW+VKNSWG+ WG+K
Sbjct: 274 V--YNEPQCDAQNLDHGVLVVGYGTDESGD----DYWLVKNSWGTTWGDK 317



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 71/155 (45%), Gaps = 16/155 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSDLQQ 104
           F  +H K Y    +   R + F  N  K A+  QR   G   F+  VNK+ DL   + +Q
Sbjct: 32  FKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRYAEGKVSFKLAVNKYADLLHHEFRQ 91

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           L  G N          +L     S  TD   +   F S  H   LP++ DWR +G ++ V
Sbjct: 92  LMNGFNY---------TLHKQLRS--TDDSFKGVTFISPAHVT-LPKSVDWRTKGAVTAV 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS+ G +E  H  +   L  LS Q
Sbjct: 140 KDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQ 174


>gi|357465603|ref|XP_003603086.1| Cysteine proteinase [Medicago truncatula]
 gi|355492134|gb|AES73337.1| Cysteine proteinase [Medicago truncatula]
          Length = 474

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/280 (34%), Positives = 152/280 (54%), Gaps = 39/280 (13%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNLDSTLEDIQPSLQ 270
           +R E F  N++  +++ +E+  T   G+N+F DLS  + + +  G  +D           
Sbjct: 74  KRFEIFKDNLKFIDEHNAENR-TYKVGLNRFADLSNEEYRSRYLGTKID----------- 121

Query: 271 APFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVE 330
            P       T+ R+ ++ +   GD LP++ DWR++G + +VK+QG C  CWAFS +  VE
Sbjct: 122 -PIGMMMARTKTRSNRY-APSVGDKLPKSVDWRSQGAVVQVKDQGSCGSCWAFSTIAAVE 179

Query: 331 AMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 389
            ++ I    L  LS Q+LVDCD + N GC+GG M+ A ++II+NGG+ SD+ YPY+  + 
Sbjct: 180 GINKIVTGELVSLSEQELVDCDRTVNAGCDGGLMEYAFEFIINNGGIDSDEDYPYRGVDG 239

Query: 390 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSG--- 443
           +  C   ++    V + +Y ++P  +E  +KK VA + P+SV + A G     Y SG   
Sbjct: 240 K--CDQYKKNARVVSIDDYEQVPAYDELALKKAVANQ-PISVAIEAGGREFQLYVSGIFT 296

Query: 444 ---------GVIDLNQRLYGT--SIPYWIVKNSWGSDWGE 472
                    GV  +    YGT   + YWIV+NSWG  WGE
Sbjct: 297 GKCGTALDHGVTAVG---YGTENGVDYWIVRNSWGKSWGE 333



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  +L  L+ ++LVDCD + N GC+GG M+ A ++II+NGG+ SD+ YPY+  + +
Sbjct: 181 INKIVTGELVSLSEQELVDCDRTVNAGCDGGLMEYAFEFIINNGGIDSDEDYPYRGVDGK 240

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C   ++    V + +Y ++P  +E  +KK VA + P+SV + A G  +  Y  G+   
Sbjct: 241 --CDQYKKNARVVSIDDYEQVPAYDELALKKAVANQ-PISVAIEAGGREFQLYVSGIFTG 297

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   A +H +  VGYG E   D     YWIV+NSWG  WGE
Sbjct: 298 K---CG-TALDHGVTAVGYGTENGVD-----YWIVRNSWGKSWGE 333



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 15/136 (11%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQPSLQ 122
           +R E F  N++  +++  E+  T    +N+F DLS+ + + +  G  +D           
Sbjct: 74  KRFEIFKDNLKFIDEHNAENR-TYKVGLNRFADLSNEEYRSRYLGTKID----------- 121

Query: 123 APFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVE 182
            P       T+ R+ ++ +   GD LP++ DWR++G + +VK+QG C  CWAFS +  VE
Sbjct: 122 -PIGMMMARTKTRSNRY-APSVGDKLPKSVDWRSQGAVVQVKDQGSCGSCWAFSTIAAVE 179

Query: 183 AMHAIQGNNLTELSVQ 198
            ++ I    L  LS Q
Sbjct: 180 GINKIVTGELVSLSEQ 195


>gi|356517358|ref|XP_003527354.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
 gi|356577767|ref|XP_003556994.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 343

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 37/292 (12%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            + KVY   ++  RR + F  NV   E + +  +     G+N+F DL+  +         
Sbjct: 45  RYAKVYKDPQERERRFKIFKENVNYIEAFNNAANKPYTLGINQFADLTNEEF-------- 96

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                 I P  +       + T    F++ ++     +P   DWR +G ++ +K+QG+C 
Sbjct: 97  ------IAPRNRFKGHMCSSITRTTTFKYENV---TAIPSTVDWRQKGAVTPIKDQGQCG 147

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGV 376
           CCWAFSAV   E +HA+    L  LS Q++VDCD    + GC GG MD A ++II N G+
Sbjct: 148 CCWAFSAVAATEGIHALSAGKLISLSEQEVVDCDTKGEDQGCAGGFMDGAFKFIIQNHGL 207

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPYKA + +  C           +  Y  +P   E+ ++K VA + P+SV ++A+
Sbjct: 208 NNEPNYPYKAVDGK--CNAKAAANHVATITGYEDVPVNNEKALQKAVANQ-PVSVAIDAS 264

Query: 437 G---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           G    FY SG            GV  +   +      YW+VKNSWG++WGE+
Sbjct: 265 GSDFQFYQSGVFTGSCGTELDHGVTAVGYGVSADGTEYWLVKNSWGTEWGEE 316



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ +++VDCD    + GC GG MD A ++II N G+ ++  YPYKA + +  C   
Sbjct: 168 KLISLSEQEVVDCDTKGEDQGCAGGFMDGAFKFIIQNHGLNNEPNYPYKAVDGK--CNAK 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
                   +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 226 AAANHVATITGYEDVPVNNEKALQKAVANQ-PVSVAIDASGSDFQFYQSGVFTGS---CG 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG++WGE+
Sbjct: 282 TEL-DHGVTAVGYG--VSADGTE--YWLVKNSWGTEWGEE 316



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   ++  RR + F  NV   E +    +      +N+F DL++ +  
Sbjct: 38  RHEEWMGRYAKVYKDPQERERRFKIFKENVNYIEAFNNAANKPYTLGINQFADLTNEEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +       + T    F++ ++     +P   DWR +G ++ +
Sbjct: 97  -------------IAPRNRFKGHMCSSITRTTTFKYENV---TAIPSTVDWRQKGAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +HA+    L  LS Q
Sbjct: 141 KDQGQCGCCWAFSAVAATEGIHALSAGKLISLSEQ 175


>gi|356517348|ref|XP_003527349.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 37/292 (12%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            + KVY   ++  RR + F  NV   E + +  +     G+N+F DL+  +         
Sbjct: 45  RYAKVYKDPQERERRFKIFKENVNYIEAFNNAANKPYTLGINQFADLTNEEF-------- 96

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                 I P  +       + T    F++ ++     +P   DWR +G ++ +K+QG+C 
Sbjct: 97  ------IAPRNRFKGHMCSSITRTTTFKYENV---TAIPSTVDWRQKGAVTPIKDQGQCG 147

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGV 376
           CCWAFSAV   E +HA+    L  LS Q++VDCD    + GC GG MD A ++II N G+
Sbjct: 148 CCWAFSAVAATEGIHALSAGKLISLSEQEVVDCDTKGEDQGCAGGFMDGAFKFIIQNHGL 207

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPYKA + +  C           +  Y  +P   E+ ++K VA + P+SV ++A+
Sbjct: 208 NNEPNYPYKAVDGK--CNAKAAANHVATITGYEDVPVNNEKALQKAVANQ-PVSVAIDAS 264

Query: 437 G---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           G    FY SG            GV  +   +      YW+VKNSWG++WGE+
Sbjct: 265 GSDFQFYQSGVFTGSCGTELDHGVTAVGYGVSADGTEYWLVKNSWGTEWGEE 316



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ +++VDCD    + GC GG MD A ++II N G+ ++  YPYKA + +  C   
Sbjct: 168 KLISLSEQEVVDCDTKGEDQGCAGGFMDGAFKFIIQNHGLNNEPNYPYKAVDGK--CNAK 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
                   +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 226 AAANHVATITGYEDVPVNNEKALQKAVANQ-PVSVAIDASGSDFQFYQSGVFTGS---CG 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG++WGE+
Sbjct: 282 TEL-DHGVTAVGYG--VSADGTE--YWLVKNSWGTEWGEE 316



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   ++  RR + F  NV   E +    +      +N+F DL++ +  
Sbjct: 38  RHEEWMGRYAKVYKDPQERERRFKIFKENVNYIEAFNNAANKPYTLGINQFADLTNEEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +       + T    F++ ++     +P   DWR +G ++ +
Sbjct: 97  -------------IAPRNRFKGHMCSSITRTTTFKYENV---TAIPSTVDWRQKGAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +HA+    L  LS Q
Sbjct: 141 KDQGQCGCCWAFSAVAATEGIHALSAGKLISLSEQ 175


>gi|332326591|gb|AEE42619.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 156/315 (49%), Gaps = 33/315 (10%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  + 
Sbjct: 47  RAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGAAY 104

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
               +      +   + D                +P+A DWR +G ++ VK+QG C  CW
Sbjct: 105 FAAAKQHAGQHYRKARADL-------------SAVPDAVDWREKGAVTPVKBQGACGSCW 151

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVVSD 379
           AFSAVG +E+  A+  + L  LS QQLV CD  + GC GG M  A ++++   NG + ++
Sbjct: 152 AFSAVGNIESQWAVAXHGLVRLSEQQLVSCDDKDSGCGGGLMTQAFEWLLRNMNGTMFTE 211

Query: 380 QAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
            +YPY +S  +   C    E     ++  Y  I    E  M  W+A  GP+S+ ++A+  
Sbjct: 212 DSYPYVSSTGDVPECTNSSELVPGARIDGYVMIE-SXETVMAAWLAKSGPISIAVDASPF 270

Query: 439 FYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK--VEDKVGSSGNR 484
             Y  GV+       LN  +    Y  +  +PYW++KNSWG DWGEK  V   +G +   
Sbjct: 271 MSYESGVLTSCVGKXLNHGVLLVGYNMTGEVPYWVIKNSWGEDWGEKGYVRVTMGVNACL 330

Query: 485 TRDLELTGVLPSKLS 499
             +  ++  +P  L+
Sbjct: 331 LTEYPVSAHVPQSLA 345



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L RL+ ++LV CD  + GC GG M  A ++++ N  G + ++ +YPY +S  +   C   
Sbjct: 170 LVRLSEQQLVSCDDKDSGCGGGLMTQAFEWLLRNMNGTMFTEDSYPYVSSTGDVPECTNS 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            E     ++  Y  I    E  M  W+A  GP+S+ ++A+    Y  GV+      C  K
Sbjct: 230 SELVPGARIDGYVMIE-SXETVMAAWLAKSGPISIAVDASPFMSYESGVLTS----CVGK 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             NH +++VGY    +     +PYW++KNSWG DWGEK
Sbjct: 285 XLNHGVLLVGYNMTGE-----VPYWVIKNSWGEDWGEK 317



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYWRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A+  + L  LS Q 
Sbjct: 134 EKGAVTPVKBQGACGSCWAFSAVGNIESQWAVAXHGLVRLSEQQ 177


>gi|356577763|ref|XP_003556992.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 37/292 (12%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            + KVY   ++  RR + F  NV   E + +  +     G+N+F DL+  +         
Sbjct: 45  RYAKVYKDPQERERRFKIFKENVNYIEAFNNAANKPYTLGINQFADLTNEEF-------- 96

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                 I P  +       + T    F++ ++     +P   DWR +G ++ +K+QG+C 
Sbjct: 97  ------IAPRNRFKGHMCSSITRTTTFKYENV---TAIPSTVDWRQKGAVTPIKDQGQCG 147

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGV 376
           CCWAFSAV   E +HA+    L  LS Q++VDCD    + GC GG MD A ++II N G+
Sbjct: 148 CCWAFSAVAATEGIHALSAGKLISLSEQEVVDCDTKGEDQGCAGGFMDGAFKFIIQNHGL 207

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPYKA + +  C           +  Y  +P   E+ ++K VA + P+SV ++A+
Sbjct: 208 NNEPNYPYKAVDGK--CNAKAAANHVATITGYEDVPVNNEKALQKAVANQ-PVSVAIDAS 264

Query: 437 G---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           G    FY SG            GV  +   +      YW+VKNSWG++WGE+
Sbjct: 265 GSDFQFYQSGVFTGSCGTELDHGVTAVGYGVSADGTEYWLVKNSWGTEWGEE 316



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ +++VDCD    + GC GG MD A ++II N G+ ++  YPYKA + +  C   
Sbjct: 168 KLISLSEQEVVDCDTKGEDQGCAGGFMDGAFKFIIQNHGLNNEPNYPYKAVDGK--CNAK 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
                   +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 226 AAANHVATITGYEDVPVNNEKALQKAVANQ-PVSVAIDASGSDFQFYQSGVFTGS---CG 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG++WGE+
Sbjct: 282 TEL-DHGVTAVGYG--VSADGTE--YWLVKNSWGTEWGEE 316



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   ++  RR + F  NV   E +    +      +N+F DL++ +  
Sbjct: 38  RHEEWMGRYAKVYKDPQERERRFKIFKENVNYIEAFNNAANKPYTLGINQFADLTNEEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +       + T    F++ ++     +P   DWR +G ++ +
Sbjct: 97  -------------IAPRNRFKGHMCSSITRTTTFKYENV---TAIPSTVDWRQKGAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +HA+    L  LS Q
Sbjct: 141 KDQGQCGCCWAFSAVAATEGIHALSAGKLISLSEQ 175


>gi|297851334|ref|XP_002893548.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339390|gb|EFH69807.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 346

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 155/309 (50%), Gaps = 54/309 (17%)

Query: 195 LSVQHH-------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSE 247
           +  +HH        +VYS   +   R + F  N++  E +  +   T   GVN+F D ++
Sbjct: 33  IVAEHHQQWMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTK 92

Query: 248 SD-------LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAF 300
            +       L+   G+     ++++ PS    ++ N +D                 PE  
Sbjct: 93  EEFIATHTGLKGFNGIPSSEFVDEMIPS----WNWNVSDVAG--------------PEIK 134

Query: 301 DWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCN 359
           DWR EG ++ VK QG+C CCWAFS+V  VE +  I G +L  LS QQL+DCD   + GCN
Sbjct: 135 DWRYEGAVTPVKYQGQCGCCWAFSSVAAVEGLTKIVGGNLVSLSEQQLLDCDRERDNGCN 194

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG M DA  YII N G+ S+ +YPY+  E+E  C    +      ++ +  +P   E  +
Sbjct: 195 GGIMSDAFSYIIKNRGIASEASYPYQ--ETEGTCRYNAKP--SAWIRGFQTVPSNNERAL 250

Query: 420 KKWVATRGPLSVGMNAN--GLFYYSGGV-------IDLNQRL----YGTS---IPYWIVK 463
            + V +R P+SV ++A+  G  +YSGGV        D+N  +    YGTS   I YW+ K
Sbjct: 251 LEAV-SRQPVSVSIDADGPGFMHYSGGVYDEPYCGTDVNHAVTFVGYGTSPEGIKYWLAK 309

Query: 464 NSWGSDWGE 472
           NSWG  WGE
Sbjct: 310 NSWGETWGE 318



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           LT ++   L  L+ ++L+DCD   + GCNGG M DA  YII N G+ S+ +YPY+  E+E
Sbjct: 166 LTKIVGGNLVSLSEQQLLDCDRERDNGCNGGIMSDAFSYIIKNRGIASEASYPYQ--ETE 223

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDL 606
             C    +      ++ +  +P   E  + + V +R P+SV ++A+  G  +YSGGV D 
Sbjct: 224 GTCRYNAKP--SAWIRGFQTVPSNNERALLEAV-SRQPVSVSIDADGPGFMHYSGGVYD- 279

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +  C     NHA+  VGYG   +     I YW+ KNSWG  WGE
Sbjct: 280 -EPYCGTDV-NHAVTFVGYGTSPE----GIKYWLAKNSWGETWGE 318



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 25/159 (15%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD------ 101
           +M    +VYS   +   R + F  N++  E + ++   T    VN+F D +  +      
Sbjct: 41  WMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTKEEFIATHT 100

Query: 102 -LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            L+   G+     ++++ PS    ++ N +D                 PE  DWR EG +
Sbjct: 101 GLKGFNGIPSSEFVDEMIPS----WNWNVSDVAG--------------PEIKDWRYEGAV 142

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + VK QG+C CCWAFS+V  VE +  I G NL  LS Q 
Sbjct: 143 TPVKYQGQCGCCWAFSSVAAVEGLTKIVGGNLVSLSEQQ 181


>gi|224096714|ref|XP_002310708.1| predicted protein [Populus trichocarpa]
 gi|222853611|gb|EEE91158.1| predicted protein [Populus trichocarpa]
          Length = 356

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 159/294 (54%), Gaps = 38/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +Q H K Y+ + +  +R E F  N+   +++ S++  T   G+ KF DL+  + + +   
Sbjct: 32  LQKHGKAYNRLGEKAKRFEIFKNNLRFIDEHNSQNR-TYKVGLTKFADLTNQEYRAM--- 87

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T  D +  L      ++  +E  A+     + GD LPE+ DWR +G ++ +K+QG 
Sbjct: 88  -FLGTRSDPKRRLM----KSKNPSERYAY-----KAGDKLPESVDWRGKGAVNPIKDQGS 137

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD-MSNGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS V  VE ++ I    L  LS Q+LVDCD   N GCNGG MD A Q+II+NGG
Sbjct: 138 CGSCWAFSTVAAVEGINQIVTGELISLSEQELVDCDRFYNAGCNGGLMDYAFQFIINNGG 197

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + +++ YPY  ++    C   + +   V +  +  +   +E+ ++K VA + P+SV + A
Sbjct: 198 LDTEKDYPYLGNDDT--CDRDKMKTKAVSIDGFEDVLPFDEKALQKAVAHQ-PVSVAIEA 254

Query: 436 NGL---FYYSG------------GVIDLNQRLYGT--SIPYWIVKNSWGSDWGE 472
           +G+   FY SG            GV+ +    YGT   + YW+V+NSWG++WGE
Sbjct: 255 SGMALQFYQSGVFTGECGTALDHGVVVVG---YGTEKGLDYWLVRNSWGTEWGE 305



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 96/162 (59%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  +L  L+ ++LVDCD   N GCNGG MD A Q+II+NGG+ +++ YPY  ++    C
Sbjct: 156 IVTGELISLSEQELVDCDRFYNAGCNGGLMDYAFQFIINNGGLDTEKDYPYLGNDDT--C 213

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              + +   V +  +  +   +E+ ++K VA + P+SV + A+G  L +Y  GV      
Sbjct: 214 DRDKMKTKAVSIDGFEDVLPFDEKALQKAVAHQ-PVSVAIEASGMALQFYQSGVFTGE-- 270

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +++VGYG E+  D     YW+V+NSWG++WGE
Sbjct: 271 -CGT-ALDHGVVVVGYGTEKGLD-----YWLVRNSWGTEWGE 305



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 14/151 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           +++ H K Y+ + +  +R E F  N+   +++  ++  T    + KF DL++ + + +  
Sbjct: 31  WLQKHGKAYNRLGEKAKRFEIFKNNLRFIDEHNSQNR-TYKVGLTKFADLTNQEYRAM-- 87

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                T  D +  L      ++  +E  A+     + GD LPE+ DWR +G ++ +K+QG
Sbjct: 88  --FLGTRSDPKRRLM----KSKNPSERYAY-----KAGDKLPESVDWRGKGAVNPIKDQG 136

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS V  VE ++ I    L  LS Q
Sbjct: 137 SCGSCWAFSTVAAVEGINQIVTGELISLSEQ 167


>gi|375073978|gb|AFA34856.1| cathepsin L-like protein [Trypanosoma cruzi]
          Length = 467

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P +                      P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC+GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++VG++A
Sbjct: 205 VYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVGVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYWI+KNSW + WGE    +V    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEGGYIRVAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 89/156 (57%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++VG++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVGVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYWI+KNSW + WGE
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWIIKNSWTTQWGE 312



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  + 
Sbjct: 36  SQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEF 94

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +     N  +     Q   + P +                      P A DWRA G ++ 
Sbjct: 95  RSRYH-NGAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTA 137

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 138 VKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|320169658|gb|EFW46557.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 324

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 145/294 (49%), Gaps = 42/294 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           H   Y++V +   R   +  N++  E + SE   +    VNKF DL+  +   +  GL  
Sbjct: 29  HGVSYATVGEETARRGIYRANLDFIEKHNSEGH-SYKLAVNKFADLTYPEFAAKYLGLRF 87

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS-LRHGDDLPEAFDWRAEGVISKVKEQGKC 317
           D+T                     ++F  ++ L     LP++ DWR  G+++ +K+QG+C
Sbjct: 88  DAT------------------NATKSFAASTYLPRMVSLPDSVDWRTAGIVTPIKDQGQC 129

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGG 375
             CW+FS  G VE  HA +   L  LS Q LVDC  +  N GCNGG MD A QYII N G
Sbjct: 130 GSCWSFSTTGSVEGQHARKTGQLVSLSEQNLVDCSSAQGNAGCNGGLMDQAFQYIISNNG 189

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++ +YPY A   + G            V  Y  I  G E +++  VAT GP+SV ++A
Sbjct: 190 IDTESSYPYTA---QDGTCQFNSANVGATVASYQDIASGSESDLQNAVATVGPISVAIDA 246

Query: 436 N--GLFYYSGGVID--------LNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           +     +YS GV +        L+  +    YGT  S  YW+VKNSWG+ WG+ 
Sbjct: 247 SQPSFQFYSSGVYNEPACSSSQLDHGVLAVGYGTSGSSDYWLVKNSWGTSWGQS 300



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 86/160 (53%), Gaps = 14/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           +L  L+ + LVDC  +  N GCNGG MD A QYII N G+ ++ +YPY A   + G    
Sbjct: 151 QLVSLSEQNLVDCSSAQGNAGCNGGLMDQAFQYIISNNGIDTESSYPYTA---QDGTCQF 207

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCN 612
                   V  Y  I  G E +++  VAT GP+SV ++A+     +YS GV   N+  C+
Sbjct: 208 NSANVGATVASYQDIASGSESDLQNAVATVGPISVAIDASQPSFQFYSSGV--YNEPACS 265

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               +H ++ VGYG     D     YW+VKNSWG+ WG+ 
Sbjct: 266 SSQLDHGVLAVGYGTSGSSD-----YWLVKNSWGTSWGQS 300



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 45/251 (17%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           F ++   H   Y++V +   R   +  N++  E +  E   +    VNKF DL+  +   
Sbjct: 22  FDSWKATHGVSYATVGEETARRGIYRANLDFIEKHNSEGH-SYKLAVNKFADLTYPEFAA 80

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS-LRHGDDLPEAFDWRAEGVISK 162
           +  GL  D+T                     ++F  ++ L     LP++ DWR  G+++ 
Sbjct: 81  KYLGLRFDAT------------------NATKSFAASTYLPRMVSLPDSVDWRTAGIVTP 122

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED------LLRRHEN 216
           +K+QG+C  CW+FS  G VE  HA +   L  LS Q+     S+  +      L+ +   
Sbjct: 123 IKDQGQCGSCWSFSTTGSVEGQHARKTGQLVSLSEQNLVDCSSAQGNAGCNGGLMDQAFQ 182

Query: 217 FV-----TNVEKAEDYQSEDSGTAVFG-------VNKFFDL---SESDLQQLTGL--NLD 259
           ++      + E +  Y ++D GT  F        V  + D+   SESDLQ        + 
Sbjct: 183 YIISNNGIDTESSYPYTAQD-GTCQFNSANVGATVASYQDIASGSESDLQNAVATVGPIS 241

Query: 260 STLEDIQPSLQ 270
             ++  QPS Q
Sbjct: 242 VAIDASQPSFQ 252


>gi|5679322|gb|AAD46920.1|AF167986_1 putative cysteine proteinase GmPM33 [Glycine max]
          Length = 363

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 152/306 (49%), Gaps = 68/306 (22%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++++ + YS+ E+ LRR   F  N+ +A ++Q+ D  TAV GV +F  L  S+       
Sbjct: 58  MENYGRSYSTEEEYLRRLGIFAQNMVRAAEHQALDP-TAVHGVTQF-SLPVSN------- 108

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              +    I P L+                       D LPE FDWR +G +++VK QG+
Sbjct: 109 ---NAAGGIAPPLEV----------------------DGLPENFDWREKGAVTEVKLQGR 143

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNGGCNGGRMDDAL 367
           C  CWAFS  G +E  + +    L  LS QQL+DCD           + GCNGG M +A 
Sbjct: 144 CGSCWAFSTTGSIEGANFLATGKLVSLSDQQLLDCDNKCDITEKTSCDNGCNGGLMTNAY 203

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
            Y++++GG+  + +YPY     ERG    + E   VK+  ++ IP  +E ++  ++   G
Sbjct: 204 NYLLESGGLEEESSYPYTG---ERGECKFDPEKIAVKITNFTNIP-ADENQIAAYLVKNG 259

Query: 428 PLSVGMNANGLFYYSGGV----IDLNQRL--------YGT---SI------PYWIVKNSW 466
           PL++G+NA  +  Y GGV    I   +RL        YG    SI      PYWI+KNSW
Sbjct: 260 PLAMGVNAIFMQTYIGGVSCPLICSKKRLNHGVLLVGYGAKGFSILRLGNKPYWIIKNSW 319

Query: 467 GSDWGE 472
           G  WGE
Sbjct: 320 GEKWGE 325



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 164/357 (45%), Gaps = 69/357 (19%)

Query: 332 MHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 391
           M A +G++L  L+   L  C ++    +G                V D A   K  ++E 
Sbjct: 1   MEAKRGHALMCLARVSLFLCALTLSAAHGST-------------TVQDIARKLKLGDNE- 46

Query: 392 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM------------NANGLF 439
             L+  E+ FKV ++ Y R    EEE +++     G  +  M              +G+ 
Sbjct: 47  --LLRTEKKFKVFMENYGRSYSTEEEYLRRL----GIFAQNMVRAAEHQALDPTAVHGVT 100

Query: 440 YYSGGVIDLNQRLYGTSIPYWIVKNSWGSDWGEK-------VEDKVGS--SGNRTRDLEL 490
            +S  V   N    G + P  +       DW EK       ++ + GS  + + T  +E 
Sbjct: 101 QFSLPVS--NNAAGGIAPPLEVDGLPENFDWREKGAVTEVKLQGRCGSCWAFSTTGSIEG 158

Query: 491 TGVLPS-KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAY 540
              L + KL  L+ ++L+DCD           + GCNGG M +A  Y++++GG+  + +Y
Sbjct: 159 ANFLATGKLVSLSDQQLLDCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSY 218

Query: 541 PYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYS 600
           PY     ERG    + E   VK+  ++ IP  +E ++  ++   GPL++G+NA  +  Y 
Sbjct: 219 PYTG---ERGECKFDPEKIAVKITNFTNIP-ADENQIAAYLVKNGPLAMGVNAIFMQTYI 274

Query: 601 GGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGE 651
           GGV      +C+ K  NH +++VGYG +    G SI      PYWI+KNSWG  WGE
Sbjct: 275 GGVS--CPLICSKKRLNHGVLLVGYGAK----GFSILRLGNKPYWIIKNSWGEKWGE 325



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 34/156 (21%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  FM ++ + YS+ E+ LRR   F  N+ +A ++Q  D  TAV  V +F  L  S+  
Sbjct: 53  KFKVFMENYGRSYSTEEEYLRRLGIFAQNMVRAAEHQALDP-TAVHGVTQF-SLPVSN-- 108

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +    I P L+                       D LPE FDWR +G +++V
Sbjct: 109 --------NAAGGIAPPLEV----------------------DGLPENFDWREKGAVTEV 138

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG+C  CWAFS  G +E  + +    L  LS Q 
Sbjct: 139 KLQGRCGSCWAFSTTGSIEGANFLATGKLVSLSDQQ 174


>gi|356545063|ref|XP_003540965.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 361

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 155/322 (48%), Gaps = 42/322 (13%)

Query: 172 CWAFSAVGVVEAMHAIQGNNLTELSVQ---HHDKVYSSVEDLLRRHENFVTNVEKAEDYQ 228
           C AF A  V     ++Q  ++ E   Q    + KVY   ++  +R   F  NV   E + 
Sbjct: 35  CMAFLAFQVT--CRSLQDASMYERHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAFN 92

Query: 229 SEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN 288
           +  +      +N+F DL+  +               I P  +  F  +   + +R   F 
Sbjct: 93  NAANKRYKLAINQFADLTNEEF--------------IAP--RNRFKGHMCSSIIRTTTF- 135

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
              +   +P   DWR +G ++ +K+QG+C CCWAFSAV   E +HA+    L  LS Q+L
Sbjct: 136 KYENVTAVPSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQEL 195

Query: 349 VDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           VDCD    + GC GG MDDA +++I N G+ ++  YPYK  + +  C   E     V + 
Sbjct: 196 VDCDTKGVDQGCEGGLMDDAFKFVIQNHGLNTEANYPYKGVDGK--CNANEAANDVVTIT 253

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNANG---LFYYSG------------GVIDLNQR 451
            Y  +P   E+ ++K VA + P+SV ++A+G    FY SG            GV  +   
Sbjct: 254 GYEDVPANNEKALQKAVANQ-PVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYG 312

Query: 452 LYGTSIPYWIVKNSWGSDWGEK 473
           +      YW+VKNSWG++WGE+
Sbjct: 313 VSNDGTEYWLVKNSWGTEWGEE 334



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  +   KL  L+ ++LVDCD    + GC GG MDDA +++I N G+ ++  YPYK  + 
Sbjct: 179 IHALTSGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFVIQNHGLNTEANYPYKGVDG 238

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
           +  C   E     V +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV  
Sbjct: 239 K--CNANEAANDVVTITGYEDVPANNEKALQKAVANQ-PVSVAIDASGSDFQFYKSGVFT 295

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +   C  +  +H +  VGYG     DGT   YW+VKNSWG++WGE+
Sbjct: 296 GS---CGTEL-DHGVTAVGYG--VSNDGTE--YWLVKNSWGTEWGEE 334



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   ++  +R   F  NV   E +    +      +N+F DL++ +  
Sbjct: 56  RHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAFNNAANKRYKLAINQFADLTNEEF- 114

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +  F  +   + +R   F    +   +P   DWR +G ++ +
Sbjct: 115 -------------IAP--RNRFKGHMCSSIIRTTTF-KYENVTAVPSTVDWRQKGAVTPI 158

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +HA+    L  LS Q
Sbjct: 159 KDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQ 193


>gi|223946391|gb|ACN27279.1| unknown [Zea mays]
          Length = 279

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 122/206 (59%), Gaps = 24/206 (11%)

Query: 284 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTEL 343
           +F +   R   D+P + DWR +G ++ VK+QG+C  CWAFS +  VE ++AI+  +LT L
Sbjct: 34  SFMYADAR---DVPASVDWRQKGAVTDVKDQGQCGSCWAFSTIAAVEGINAIKTKNLTSL 90

Query: 344 SVQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 402
           S QQLVDCD  +N GCNGG MD A QYI  +GGV ++ AYPY+A ++       +     
Sbjct: 91  SEQQLVDCDTKANAGCNGGLMDYAFQYIAKHGGVAAEDAYPYRARQAS----CKKSPAPV 146

Query: 403 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL-- 452
           V +  Y  +P  +E  +KK VA + P+SV + A+G    +YS GV       +L+  +  
Sbjct: 147 VTIDGYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGVFSGRCGTELDHGVAA 205

Query: 453 --YGTS---IPYWIVKNSWGSDWGEK 473
             YG +     YW+VKNSWG +WGEK
Sbjct: 206 VGYGVTADGTKYWLVKNSWGPEWGEK 231



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +    L+ L+ ++LVDCD  +N GCNGG MD A QYI  +GGV ++ AYPY+A ++ 
Sbjct: 79  INAIKTKNLTSLSEQQLVDCDTKANAGCNGGLMDYAFQYIAKHGGVAAEDAYPYRARQAS 138

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
                 +     V +  Y  +P  +E  +KK VA + P+SV + A+G    +YS GV   
Sbjct: 139 ----CKKSPAPVVTIDGYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGVFSG 193

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  +  +H +  VGYG     DGT   YW+VKNSWG +WGEK
Sbjct: 194 R---CGTEL-DHGVAAVGYG--VTADGTK--YWLVKNSWGPEWGEK 231



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)

Query: 136 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTEL 195
           +F +   R   D+P + DWR +G ++ VK+QG+C  CWAFS +  VE ++AI+  NLT L
Sbjct: 34  SFMYADAR---DVPASVDWRQKGAVTDVKDQGQCGSCWAFSTIAAVEGINAIKTKNLTSL 90

Query: 196 SVQ 198
           S Q
Sbjct: 91  SEQ 93


>gi|118627554|emb|CAL64936.1| putative cysteine protease 8 [Trifolium pratense]
          Length = 344

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 144/295 (48%), Gaps = 38/295 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQ-SEDSGTAVFGVNKFFDLSESDLQQLTG 255
           +  + K+Y   ++   R + F  NV   E +  ++D+ +   G+N+F DL+  +      
Sbjct: 43  MSQYGKIYKDHQERETRFKIFKENVNYIETFNNADDTKSYKLGINQFADLTNEEF----- 97

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
                       + +  F  +   + MR   F    +   +P   DWR +G ++ VK QG
Sbjct: 98  -----------IASRNKFKGHMCSSIMRTTSFK-YENVSGIPSTVDWRKKGAVTPVKNQG 145

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDN 373
           +C CCWAFSAV   E +H +    L  LS Q+LVDCD    + GC GG MDDA ++II N
Sbjct: 146 QCGCCWAFSAVAATEGIHKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQN 205

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++  YPY+  +    C   +     V +  Y  +P   E+ ++K VA + P+SV +
Sbjct: 206 HGLSTEAQYPYEGVDGT--CNANKASVQAVTITGYEDVPANSEQALQKAVANQ-PISVAI 262

Query: 434 NANG---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           +A+G    FY SG            GV  +   +      YW+VKNSWG+DWGE+
Sbjct: 263 DASGSDFQFYKSGVFTGACGTELDHGVTAVGYGVSNDGTKYWLVKNSWGTDWGEE 317



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 89/160 (55%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG MDDA ++II N G+ ++  YPY+  +    C   
Sbjct: 169 KLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLSTEAQYPYEGVDGT--CNAN 226

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +     V +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV       C 
Sbjct: 227 KASVQAVTITGYEDVPANSEQALQKAVANQ-PISVAIDASGSDFQFYKSGVF---TGACG 282

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG+DWGE+
Sbjct: 283 TEL-DHGVTAVGYG--VSNDGT--KYWLVKNSWGTDWGEE 317



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 18/161 (11%)

Query: 39  NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQR-EDSGTAVFEVNKFFDL 97
           +S   R   +M  + K+Y   ++   R + F  NV   E +   +D+ +    +N+F DL
Sbjct: 33  DSMYERHGQWMSQYGKIYKDHQERETRFKIFKENVNYIETFNNADDTKSYKLGINQFADL 92

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           ++ +                  + +  F  +   + MR   F    +   +P   DWR +
Sbjct: 93  TNEEF----------------IASRNKFKGHMCSSIMRTTSFK-YENVSGIPSTVDWRKK 135

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G ++ VK QG+C CCWAFSAV   E +H +    L  LS Q
Sbjct: 136 GAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLISLSEQ 176


>gi|283046734|ref|NP_001164314.1| cathepsin L precursor [Tribolium castaneum]
 gi|270001247|gb|EEZ97694.1| cathepsin L precursor [Tribolium castaneum]
          Length = 328

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/294 (37%), Positives = 147/294 (50%), Gaps = 42/294 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF---GVNKFFDLSESDLQQLTGL 256
           H K YSS  + L+R   F  N+ K E++ ++ +   V     VN+F D++  +       
Sbjct: 33  HKKQYSSPIEELKRMAIFQDNLVKIEEHNAKFAKGEVTYSKAVNQFADMTADEFMAYVNR 92

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L +T       L+ PF   Q+D    A                DWR    +S+VK QG+
Sbjct: 93  GL-ATKPKKNEKLRLPFV--QSDKPAAA--------------EVDWR-NSAVSEVKNQGQ 134

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C  CW+FS  G VE   AI G  LT LS Q LVDC  +  N GCNGG MD A  YI DN 
Sbjct: 135 CGSCWSFSTTGAVEGQLAISGRGLTSLSEQNLVDCSSAYGNAGCNGGWMDSAFDYIHDN- 193

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G++S+ AYPY ASE    C     E     ++ Y  +P G+E  +K  VA  GP++V ++
Sbjct: 194 GIMSESAYPYTASEGS--CRFNPSESV-TSLQGYYDLPSGDENALKSAVANNGPIAVALD 250

Query: 435 ANG-LFYYSGGVI--------DLNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           A   L +YSGGV+         LN  +    YG+     YWIVKNSWGS WGE+
Sbjct: 251 ATDELQFYSGGVLYDTTCSAQALNHGVLVVGYGSEGGQDYWIVKNSWGSGWGEQ 304



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 95/158 (60%), Gaps = 14/158 (8%)

Query: 498 LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LVDC  +  N GCNGG MD A  YI DNG ++S+ AYPY ASE    C    
Sbjct: 158 LTSLSEQNLVDCSSAYGNAGCNGGWMDSAFDYIHDNG-IMSESAYPYTASEGS--CRFNP 214

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG-LFYYSGGVIDLNQRLCNPK 614
            E     ++ Y  +P G+E  +K  VA  GP++V ++A   L +YSGGV  L    C+ +
Sbjct: 215 SESV-TSLQGYYDLPSGDENALKSAVANNGPIAVALDATDELQFYSGGV--LYDTTCSAQ 271

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A NH +++VGYG E  +D     YWIVKNSWGS WGE+
Sbjct: 272 ALNHGVLVVGYGSEGGQD-----YWIVKNSWGSGWGEQ 304



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 81/187 (43%), Gaps = 26/187 (13%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSPV-TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           + TF++    L   +  T     SPV  ++  F   H K YSS  + L+R   F  N+ K
Sbjct: 1   MKTFIV----LALAVVATLAVPQSPVHAKWAEFKLTHKKQYSSPIEELKRMAIFQDNLVK 56

Query: 76  AEDYQRE-DSGTAVFE--VNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDT 132
            E++  +   G   +   VN+F D++  +        L +T       L+ PF   Q+D 
Sbjct: 57  IEEHNAKFAKGEVTYSKAVNQFADMTADEFMAYVNRGL-ATKPKKNEKLRLPFV--QSDK 113

Query: 133 EMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNL 192
              A                DWR    +S+VK QG+C  CW+FS  G VE   AI G  L
Sbjct: 114 PAAA--------------EVDWR-NSAVSEVKNQGQCGSCWSFSTTGAVEGQLAISGRGL 158

Query: 193 TELSVQH 199
           T LS Q+
Sbjct: 159 TSLSEQN 165


>gi|292397748|ref|YP_003517814.1| cathepsin [Lymantria xylina MNPV]
 gi|291065465|gb|ADD73783.1| cathepsin [Lymantria xylina MNPV]
          Length = 335

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 159/320 (49%), Gaps = 46/320 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEK--AEDYQSEDSGTAVFGVNKFFDLSESDL-QQL 253
           V++++K Y+S  +  +R+  F  N+ +  A++  + D  TA +G+NKF DLS+S+L  + 
Sbjct: 39  VENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYGINKFSDLSKSELIAKF 98

Query: 254 TGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           TGL++     +   ++   Q P                     D  P  FDWR +  ++ 
Sbjct: 99  TGLSIPQRASNFCKTIVLNQPP---------------------DKGPLHFDWREQNKVTS 137

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYI 370
           +K QG C  CWAF+ +  VE+  A++ N L +LS QQL+DCD  + GCNGG +  A + I
Sbjct: 138 IKNQGACGACWAFATLASVESQFAMRHNRLVDLSEQQLIDCDSVDMGCNGGLLHTAFEEI 197

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           I  GGV ++  YP+     +R C V     + V +    R     EE++K  +   GP+ 
Sbjct: 198 IRMGGVQAELDYPFVG--RDRRCGVDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIP 255

Query: 431 VGMNANGLFYYSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE----KV 474
           + ++A  +  Y  GVI       LN  +    YG    +PYW  KN+WG DWGE    +V
Sbjct: 256 MAIDAADIVNYYRGVISSCENNGLNHAVLLVGYGVENGVPYWAFKNTWGDDWGENGYFRV 315

Query: 475 EDKVGSSGNRTRDLELTGVL 494
              + + G    DL  T VL
Sbjct: 316 RQNINACG-MVNDLASTAVL 334



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 11/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++L+DCD  + GCNGG +  A + II  GGV ++  YP+     +R C V  
Sbjct: 165 NRLVDLSEQQLIDCDSVDMGCNGGLLHTAFEEIIRMGGVQAELDYPFVG--RDRRCGVDR 222

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
              + V +    R     EE++K  +   GP+ + ++A  +  Y  GVI      C    
Sbjct: 223 HRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVIS----SCENNG 278

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E       +PYW  KN+WG DWGE
Sbjct: 279 LNHAVLLVGYGVE-----NGVPYWAFKNTWGDDWGE 309



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 27/161 (16%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEK--AEDYQREDSGTAVFEVNKFFDLSDSDL 102
           F +F+ +++K Y+S  +  +R+  F  N+ +  A++    D  TA + +NKF DLS S+L
Sbjct: 35  FESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYGINKFSDLSKSEL 94

Query: 103 -QQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 158
             + TGL++     +   ++   Q P                     D  P  FDWR + 
Sbjct: 95  IAKFTGLSIPQRASNFCKTIVLNQPP---------------------DKGPLHFDWREQN 133

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            ++ +K QG C  CWAF+ +  VE+  A++ N L +LS Q 
Sbjct: 134 KVTSIKNQGACGACWAFATLASVESQFAMRHNRLVDLSEQQ 174


>gi|146215980|gb|ABQ10192.1| actinidin Act2a [Actinidia deliciosa]
          Length = 378

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 159/303 (52%), Gaps = 42/303 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+S+++   R E F  N+   +D+ ++ + +   G+N+F DL++ + +  T L L 
Sbjct: 49  HGKSYNSLDEKEMRFEIFKENLRIIDDHNADANRSYSLGLNRFADLTDEEYRS-TYLGLK 107

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                     + P    +TD   +       + GD LP+  DWR  G +  VK QG C+ 
Sbjct: 108 ----------RGP----KTDVSNQYMP----KVGDALPDYVDWRTVGAVVGVKNQGLCSS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVV 377
           CWAFSAV  VE ++ I   +L  LS Q+LVDC  +    GCN G M DA ++II+NGG+ 
Sbjct: 150 CWAFSAVAAVEGINKIVTGNLISLSEQELVDCGRTQITKGCNRGLMTDAFKFIINNGGIN 209

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++  YPY A + +  C +  +    V +  Y  +P   E  +KK VA + P+SVG+ + G
Sbjct: 210 TENNYPYTAKDGQ--CNLSLKNQKYVTIDSYKNVPSNNEMALKKAVAYQ-PVSVGVESEG 266

Query: 438 --LFYYSGGV--------IDLNQRL--YGT--SIPYWIVKNSWGSDWGE----KVEDKVG 479
                Y+ G+        +D    +  YGT   + YWIVKNSWG++WGE    +++  +G
Sbjct: 267 GKFKLYTSGIFTGSCGTAVDHGVTIVGYGTERGMDYWIVKNSWGTNWGESGYIRIQRNIG 326

Query: 480 SSG 482
            +G
Sbjct: 327 GAG 329



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  ++   L  L+ ++LVDC  +    GCN G M DA ++II+NGG+ ++  YPY A + 
Sbjct: 162 INKIVTGNLISLSEQELVDCGRTQITKGCNRGLMTDAFKFIINNGGINTENNYPYTAKDG 221

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
           +  C +  +    V +  Y  +P   E  +KK VA + P+SVG+ + G     Y+ G+  
Sbjct: 222 Q--CNLSLKNQKYVTIDSYKNVPSNNEMALKKAVAYQ-PVSVGVESEGGKFKLYTSGIFT 278

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +   C   A +H + IVGYG E   D     YWIVKNSWG++WGE
Sbjct: 279 GS---CG-TAVDHGVTIVGYGTERGMD-----YWIVKNSWGTNWGE 315



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 24/193 (12%)

Query: 8   SLGEKGLGYLHTFMIKVALL--ESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRR 65
           S+  K L +  T +I  + +  E+++ +T    +  +  + +++ +H K Y+S+++   R
Sbjct: 6   SIISKSLLFFSTLLILSSAIDIENSVQRTN---DQVMAMYESWLVEHGKSYNSLDEKEMR 62

Query: 66  HENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPF 125
            E F  N+   +D+  + + +    +N+F DL+D + +  T L L           + P 
Sbjct: 63  FEIFKENLRIIDDHNADANRSYSLGLNRFADLTDEEYRS-TYLGLK----------RGP- 110

Query: 126 SSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMH 185
              +TD   +       + GD LP+  DWR  G +  VK QG C+ CWAFSAV  VE ++
Sbjct: 111 ---KTDVSNQYMP----KVGDALPDYVDWRTVGAVVGVKNQGLCSSCWAFSAVAAVEGIN 163

Query: 186 AIQGNNLTELSVQ 198
            I   NL  LS Q
Sbjct: 164 KIVTGNLISLSEQ 176


>gi|38346007|emb|CAD40110.2| OSJNBa0035O13.9 [Oryza sativa Japonica Group]
 gi|125589429|gb|EAZ29779.1| hypothetical protein OsJ_13837 [Oryza sativa Japonica Group]
          Length = 314

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 149/295 (50%), Gaps = 36/295 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H + Y+   +  RR E F  NV   E      S  A    +KF+ L E+    LT  
Sbjct: 9   MAKHGRAYADDAEKARRLEVFRDNVAFIE------SVNAAASQHKFW-LEENQFADLTNA 61

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              +T   ++PS      S++ +    +F++ ++  GD LP + DWR +G ++ VK+QG 
Sbjct: 62  EFRATRTGLRPS------SSRGNRAPTSFRYANVSTGD-LPASVDWRGKGAVNPVKDQGD 114

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV  +E    +    L  LS QQLV CD+   + GC GG MDDA  +II NG
Sbjct: 115 CGCCWAFSAVAAMEGAVKLATGKLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNG 174

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPY AS+ +  C           +K Y  +P  +E  + K VA + P+SV ++
Sbjct: 175 GLAAESDYPYTASDDK--CATAGAGAAAATIKGYEDVPANDEAALLKAVANQ-PVSVAID 231

Query: 435 ANG--LFYYSGGVI--------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
                  +Y GGV+        +L+  +    YG +     YW++KNSWG+ WGE
Sbjct: 232 GGDRHFQFYKGGVLSGAAGCATELDHAITAVGYGVASDGTKYWLMKNSWGTSWGE 286



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LV CD+   + GC GG MDDA  +II NGG+ ++  YPY AS+ +  C   
Sbjct: 137 KLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNGGLAAESDYPYTASDDK--CATA 194

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
                   +K Y  +P  +E  + K VA + P+SV ++       +Y GGV  L+     
Sbjct: 195 GAGAAAATIKGYEDVPANDEAALLKAVANQ-PVSVAIDGGDRHFQFYKGGV--LSGAAGC 251

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               +HA+  VGYG     DGT   YW++KNSWG+ WGE
Sbjct: 252 ATELDHAITAVGYG--VASDGTK--YWLMKNSWGTSWGE 286



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 14/156 (8%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  H + Y+   +  RR E F  NV   E      S  A    +KF+ L ++   
Sbjct: 4   RHERWMAKHGRAYADDAEKARRLEVFRDNVAFIE------SVNAAASQHKFW-LEENQFA 56

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            LT     +T   ++PS      S++ +    +F++ ++  GD LP + DWR +G ++ V
Sbjct: 57  DLTNAEFRATRTGLRPS------SSRGNRAPTSFRYANVSTGD-LPASVDWRGKGAVNPV 109

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG C CCWAFSAV  +E    +    L  LS Q 
Sbjct: 110 KDQGDCGCCWAFSAVAAMEGAVKLATGKLVSLSEQQ 145


>gi|114679921|ref|YP_758371.1| cathepsin [Leucania separata nuclear polyhedrosis virus]
 gi|39598652|gb|AAR28838.1| cathepsin [Leucania separata nuclear polyhedrosis virus]
          Length = 359

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 158/297 (53%), Gaps = 34/297 (11%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL-QQ 252
           E  V+ +++ Y    +  +R+E FV N++     +      A + +NKF DL++ ++  +
Sbjct: 55  ERFVRDYNRTYIDSVEREQRYETFVQNLKNIN--RLNQKSQASYDINKFSDLTKDEVVAR 112

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD----DLPEAFDWRAEGVI 308
            TGL+         PSL A   ++   T+   +Q   +   D     +P+ +DWR    +
Sbjct: 113 FTGLD---------PSLAAAAYTDNNGTQ---YQLCKVVVVDGTPGRVPDLWDWRNSQKV 160

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQ 368
           + VK+QG C  CWAF++V  +E+ +AI+ + L +LS QQLVDCD  + GC+GG M  A Q
Sbjct: 161 TSVKQQGVCGSCWAFASVANIESQYAIRHDRLLDLSEQQLVDCDQIDQGCSGGLMHLAFQ 220

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
            I+  GG+ S+  YPY+  +    C +   + F VK+ +  R    +E ++++ V T GP
Sbjct: 221 EILQMGGLESELVYPYQGVDY--ACRLNPRK-FDVKLSDCHRYDLRDERKLRELVYTVGP 277

Query: 429 LSVGMNANGLFYYSGGVIDLNQR--------LYGTSI----PYWIVKNSWGSDWGEK 473
           ++V ++   +  Y  G++ +           L G  I    PYWI+KNSWG+DWGEK
Sbjct: 278 IAVAIDCIDIIDYKSGIVSMCNNNGLNHAVLLVGFGIEFDTPYWILKNSWGNDWGEK 334



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 91/156 (58%), Gaps = 12/156 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCD  + GC+GG M  A Q I+  GG+ S+  YPY+  +    C +   
Sbjct: 191 RLLDLSEQQLVDCDQIDQGCSGGLMHLAFQEILQMGGLESELVYPYQGVDY--ACRLNPR 248

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           + F VK+ +  R    +E ++++ V T GP++V ++   +  Y  G++     +CN    
Sbjct: 249 K-FDVKLSDCHRYDLRDERKLRELVYTVGPIAVAIDCIDIIDYKSGIVS----MCNNNGL 303

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           NHA+++VG+G E        PYWI+KNSWG+DWGEK
Sbjct: 304 NHAVLLVGFGIE-----FDTPYWILKNSWGNDWGEK 334



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 19/160 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLS-DSDLQ 103
           F  F+RD+++ Y    +  +R+E FV N++      ++    A +++NKF DL+ D  + 
Sbjct: 54  FERFVRDYNRTYIDSVEREQRYETFVQNLKNINRLNQK--SQASYDINKFSDLTKDEVVA 111

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD----DLPEAFDWRAEGV 159
           + TGL+         PSL A   ++   T+   +Q   +   D     +P+ +DWR    
Sbjct: 112 RFTGLD---------PSLAAAAYTDNNGTQ---YQLCKVVVVDGTPGRVPDLWDWRNSQK 159

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++ VK+QG C  CWAF++V  +E+ +AI+ + L +LS Q 
Sbjct: 160 VTSVKQQGVCGSCWAFASVANIESQYAIRHDRLLDLSEQQ 199


>gi|356517308|ref|XP_003527330.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 342

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 36/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + +VY    +  +R + F  NV   E + +         +N+F DL++ + + L   
Sbjct: 41  MAQYGRVYKDAAEKEKRFQVFKNNVHFIESFNAAGDKPFNLSINQFADLNDEEFKAL--- 97

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                L ++Q   +A +    T+T   +F++ S+     +P   DWR  G ++ +K+QG+
Sbjct: 98  -----LINVQK--KASWVETSTET---SFRYESV---TKIPATIDWRKRGAVTPIKDQGR 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG-GCNGGRMDDALQYIIDNGG 375
           C  CWAFSAV   E +H I    L  LS Q+LVDC      GC GG +DDA ++I   GG
Sbjct: 145 CGSCWAFSAVAATEGIHQITTGKLVPLSEQELVDCVKGESEGCIGGYVDDAFEFIAKKGG 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + S+  YPYK     + C V +E     ++K Y ++P   E+ + K VA + P+SV ++A
Sbjct: 205 IASETHYPYKG--VNKTCKVKKETHGVAEIKGYEKVPSNNEKALLKAVANQ-PVSVYIDA 261

Query: 436 --NGLFYYSGGVI-------DLNQRL----YGTSI---PYWIVKNSWGSDWGEK 473
             +   YYS G+        D N  +    YG ++    YW+VKNSWG++WGE+
Sbjct: 262 GTHAFKYYSSGIFNARNCGTDPNHAVAVVGYGKALDGSKYWLVKNSWGTEWGER 315



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 94/163 (57%), Gaps = 13/163 (7%)

Query: 493 VLPSKLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   KL  L+ ++LVDC      GC GG +DDA ++I   GG+ S+  YPYK     + C
Sbjct: 163 ITTGKLVPLSEQELVDCVKGESEGCIGGYVDDAFEFIAKKGGIASETHYPYKG--VNKTC 220

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQR 609
            V +E     ++K Y ++P   E+ + K VA + P+SV ++A  +   YYS G+   N R
Sbjct: 221 KVKKETHGVAEIKGYEKVPSNNEKALLKAVANQ-PVSVYIDAGTHAFKYYSSGI--FNAR 277

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     NHA+ +VGYG+    DG+   YW+VKNSWG++WGE+
Sbjct: 278 NCGTDP-NHAVAVVGYGKA--LDGSK--YWLVKNSWGTEWGER 315



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 17/183 (9%)

Query: 16  YLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           YL  F++ +A+  S++   R        R   +M  + +VY    +  +R + F  NV  
Sbjct: 9   YLILFLV-LAVWTSHVMSRRLSEACTSERHEKWMAQYGRVYKDAAEKEKRFQVFKNNVHF 67

Query: 76  AEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMR 135
            E +           +N+F DL+D + + L        L ++Q   +A +    T+T   
Sbjct: 68  IESFNAAGDKPFNLSINQFADLNDEEFKAL--------LINVQK--KASWVETSTET--- 114

Query: 136 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTEL 195
           +F++ S+     +P   DWR  G ++ +K+QG+C  CWAFSAV   E +H I    L  L
Sbjct: 115 SFRYESV---TKIPATIDWRKRGAVTPIKDQGRCGSCWAFSAVAATEGIHQITTGKLVPL 171

Query: 196 SVQ 198
           S Q
Sbjct: 172 SEQ 174


>gi|357483847|ref|XP_003612210.1| Cysteine proteinase [Medicago truncatula]
 gi|355513545|gb|AES95168.1| Cysteine proteinase [Medicago truncatula]
          Length = 344

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 145/295 (49%), Gaps = 38/295 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV-FGVNKFFDLSESDLQQLTG 255
           + H+ KVY   ++  +R + F  N++  E + + D+  +   G+N+F DL+  +      
Sbjct: 43  MNHYGKVYKDHQEREKRFKIFTENMKYIEAFNNGDNNESYKLGINQFADLTNEEF----- 97

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
                       + +  F  +   + +R   F    +   +P   DWR +G ++ VK QG
Sbjct: 98  -----------VASRNKFKGHMCSSIIRTTTF-KYENVSAIPSTVDWRKKGAVTPVKNQG 145

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDN 373
           +C CCWAFSAV   E +H +    L  LS Q+LVDCD    + GC GG MDDA ++II N
Sbjct: 146 QCGCCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQN 205

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++  YPY+  +    C   +       +  Y  +P   E+ ++K VA + P+SV +
Sbjct: 206 HGLNTEAQYPYQGVDGT--CNANKASIQATTITGYEDVPANNEQALQKAVANQ-PISVAI 262

Query: 434 NANG---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           +A+G    FY SG            GV  +   +      YW+VKNSWG+DWGE+
Sbjct: 263 DASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSNDGTKYWLVKNSWGTDWGEE 317



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG MDDA ++II N G+ ++  YPY+  +    C   
Sbjct: 169 KLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQGVDGT--CNAN 226

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +       +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 227 KASIQATTITGYEDVPANNEQALQKAVANQ-PISVAIDASGSDFQFYKSGVFTGS---CG 282

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG+DWGE+
Sbjct: 283 TEL-DHGVTAVGYG--VSNDGT--KYWLVKNSWGTDWGEE 317



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 18/156 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAV-FEVNKFFDLSDSDL 102
           R   +M  + KVY   ++  +R + F  N++  E +   D+  +    +N+F DL++ + 
Sbjct: 38  RHERWMNHYGKVYKDHQEREKRFKIFTENMKYIEAFNNGDNNESYKLGINQFADLTNEEF 97

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
                            + +  F  +   + +R   F    +   +P   DWR +G ++ 
Sbjct: 98  ----------------VASRNKFKGHMCSSIIRTTTF-KYENVSAIPSTVDWRKKGAVTP 140

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG+C CCWAFSAV   E +H +    L  LS Q
Sbjct: 141 VKNQGQCGCCWAFSAVAATEGIHKLSTGKLVSLSEQ 176


>gi|58531896|gb|AAW78660.1| cysteine protease [Nicotiana tabacum]
          Length = 361

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 152/290 (52%), Gaps = 33/290 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H  V  S+++  +R   F  NV    ++  +D    +  +NKF D++  + +        
Sbjct: 44  HHTVSRSLDEKDKRFNVFKANVHYVHNFNKKDKPYKL-KLNKFADMTNHEFRHHYA---G 99

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S ++  +  L A   S    T M A       + +D+P + DWR +G ++ VK+QGKC  
Sbjct: 100 SKIKHHRSFLGA---SRANGTFMYA-------NVEDVPPSVDWRKKGAVTPVKDQGKCGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS V  VE ++ I+ N L  LS Q+LVDCD S N GCNGG MD A ++I   GG+ +
Sbjct: 150 CWAFSTVVAVEGINQIKTNELVSLSEQELVDCDTSQNQGCNGGLMDMAFEFIKKKGGINT 209

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG- 437
           ++ YPY A   E  C + +     V +  Y  +P  +E+ + K VA + P+SV + A+G 
Sbjct: 210 EENYPYMAEGGE--CDIQKRNSPVVSIDGYEDVPPNDEDSLLKAVANQ-PVSVAIQASGS 266

Query: 438 -LFYYSGGVI--DLNQRL--------YGTSI---PYWIVKNSWGSDWGEK 473
              +YS GV   D    L        YGT++    YWIV+NSWG +WGEK
Sbjct: 267 DFQFYSEGVFTGDCGTELDHGVAIVGYGTTLDGTKYWIVRNSWGPEWGEK 316



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 92/162 (56%), Gaps = 18/162 (11%)

Query: 496 SKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           ++L  L+ ++LVDCD S N GCNGG MD A ++I   GG+ +++ YPY A   E  C + 
Sbjct: 168 NELVSLSEQELVDCDTSQNQGCNGGLMDMAFEFIKKKGGINTEENYPYMAEGGE--CDIQ 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI--DLNQRL 610
           +     V +  Y  +P  +E+ + K VA + P+SV + A+G    +YS GV   D    L
Sbjct: 226 KRNSPVVSIDGYEDVPPNDEDSLLKAVANQ-PVSVAIQASGSDFQFYSEGVFTGDCGTEL 284

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                 +H + IVGYG     DGT   YWIV+NSWG +WGEK
Sbjct: 285 ------DHGVAIVGYG--TTLDGTK--YWIVRNSWGPEWGEK 316



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  S+++  +R   F  NV    ++ ++D    + ++NKF D+++ + +      
Sbjct: 42  RSHHTVSRSLDEKDKRFNVFKANVHYVHNFNKKDKPYKL-KLNKFADMTNHEFRHHYA-- 98

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             S ++  +  L A   S    T M A       + +D+P + DWR +G ++ VK+QGKC
Sbjct: 99  -GSKIKHHRSFLGA---SRANGTFMYA-------NVEDVPPSVDWRKKGAVTPVKDQGKC 147

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 148 GSCWAFSTVVAVEGINQIKTNELVSLSEQ 176


>gi|56553473|gb|AAV97878.1| recombinant cysteine protease [Cloning vector pQ-CPB]
          Length = 335

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 155/296 (52%), Gaps = 41/296 (13%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL--QQLTG 255
           Q + +VY+++++  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE +   + L+G
Sbjct: 35  QTYQRVYATLDEEQQRLANFQRNLELMREHQANNP-HARFGITKFFDLSEEEFATRYLSG 93

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL---PEAFDWRAEGVISKVK 312
                             +++    +  A Q+   + G DL   P A DWR +G ++ VK
Sbjct: 94  ------------------ATHFAKAKKFASQYYR-KVGADLSTAPAAVDWREKGAVTPVK 134

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
           +QG C  CWAFSA+G +E+   +  +SL  LS Q+LV CD  + GCNGG M  A  ++++
Sbjct: 135 DQGMCGSCWAFSAIGNIESKWYLATHSLISLSEQELVSCDDVDEGCNGGLMGQAFDWLLN 194

Query: 373 --NGGVVSDQAYPYKASE-SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
             NG V +  +YPY +   S   C    +      +  +  I    E+ M  W+A  GP+
Sbjct: 195 NRNGAVYTGASYPYVSGNGSVPECSESSDLVIGAYIDGHVTIE-SNEDTMAAWLAANGPI 253

Query: 430 SVGMNANGLFYYSGGVI---DLNQRLYGT---------SIPYWIVKNSWGSDWGEK 473
           ++ ++A+    Y+GGV+   D  Q  +G           +PYW++KNSWG +WGEK
Sbjct: 254 AIAVDASAFMSYTGGVLTSCDGKQLNHGVLLVGYNMTGEVPYWVIKNSWGENWGEK 309



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASE-SERGCLVG 554
           L  L+ ++LV CD  + GCNGG M  A  ++++N  G V +  +YPY +   S   C   
Sbjct: 162 LISLSEQELVSCDDVDEGCNGGLMGQAFDWLLNNRNGAVYTGASYPYVSGNGSVPECSES 221

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +      +  +  I    E+ M  W+A  GP+++ ++A+    Y+GGV+      C+ K
Sbjct: 222 SDLVIGAYIDGHVTIE-SNEDTMAAWLAANGPIAIAVDASAFMSYTGGVLTS----CDGK 276

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             NH +++VGY    +     +PYW++KNSWG +WGEK
Sbjct: 277 QLNHGVLLVGYNMTGE-----VPYWVIKNSWGENWGEK 309



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 26/168 (15%)

Query: 37  YLNSPVT-RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+  PV+  F  F + + +VY+++++  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 21  YVGRPVSVLFEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNP-HARFGITKFF 79

Query: 96  DLSDSDL--QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL---PE 150
           DLS+ +   + L+G                  +++    +  A Q+   + G DL   P 
Sbjct: 80  DLSEEEFATRYLSG------------------ATHFAKAKKFASQYYR-KVGADLSTAPA 120

Query: 151 AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           A DWR +G ++ VK+QG C  CWAFSA+G +E+   +  ++L  LS Q
Sbjct: 121 AVDWREKGAVTPVKDQGMCGSCWAFSAIGNIESKWYLATHSLISLSEQ 168


>gi|27819101|gb|AAO23117.1| cysteine proteinase [Bombyx mori NPV]
          Length = 323

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 165/338 (48%), Gaps = 47/338 (13%)

Query: 177 AVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           AV    A   ++  N  E  V   +K YSS  + LRR + F  N+ +  +    DS  A 
Sbjct: 12  AVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRH 292
           + +NKF DLS+ + + + TGL+L +  ++    +   Q P                    
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG----------------- 112

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
               P  FDWR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS QQ++ CD
Sbjct: 113 ----PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIGCD 168

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A + II  GGV  +  YPY+A  +   C +   + F V+VK+  R  
Sbjct: 169 FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNSNK-FLVQVKDCYRYI 225

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYW 460
              EE++K  +   GP+ + ++A  +  Y  G+I       LN  +    YG   +IPYW
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIKYCFDSGLNHAVLLVGYGVENNIPYW 285

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +V+  + + G R  +L  T V+
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRN-ELASTAVI 322



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++ CD  + GCNGG +  A + II  GGV  +  YPY+A  +   C +  
Sbjct: 154 NELINLSEQQMIGCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNS 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  G+I    + C    
Sbjct: 212 NK-FLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII----KYCFDSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      +IPYW  KN+WG+DWGE
Sbjct: 267 LNHAVLLVGYGVE-----NNIPYWTFKNTWGTDWGE 297



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 28/166 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P   F  F+   +K YSS  + LRR + F  N+ +  +  + DS  A +E+NKF DL
Sbjct: 22  LKAP-NYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AKYEINKFSDL 78

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 153
           S D  + + TGL+L +  ++    +   Q P                        P  FD
Sbjct: 79  SKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG---------------------PLEFD 117

Query: 154 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           WR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS Q 
Sbjct: 118 WRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQ 163


>gi|195637152|gb|ACG38044.1| vignain precursor [Zea mays]
          Length = 377

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 124/213 (58%), Gaps = 24/213 (11%)

Query: 277 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 336
           Q  +   +F +   R   D+P + DWR +G ++ VK+QG+C  CWAFS +  VE ++AI+
Sbjct: 125 QGSSASASFMYADAR---DVPASVDWRQKGAVTDVKDQGQCGSCWAFSTIAAVEGINAIK 181

Query: 337 GNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 395
             +LT LS QQLVDCD  +N GCNGG MD A QYI  +GGV ++ AYPY+A ++      
Sbjct: 182 TKNLTSLSEQQLVDCDTKANAGCNGGLMDYAFQYIAKHGGVAAEDAYPYRARQAS----C 237

Query: 396 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------D 447
            +     V +  Y  +P  +E  +KK VA + P+SV + A+G    +YS GV       +
Sbjct: 238 KKSPAPVVTIDGYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGVFSGRCGTE 296

Query: 448 LNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
           L+  +    YG +     YW+VKNSWG +WGEK
Sbjct: 297 LDHGVAAVGYGVTADGTKYWLVKNSWGPEWGEK 329



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +    L+ L+ ++LVDCD  +N GCNGG MD A QYI  +GGV ++ AYPY+A ++ 
Sbjct: 177 INAIKTKNLTSLSEQQLVDCDTKANAGCNGGLMDYAFQYIAKHGGVAAEDAYPYRARQAS 236

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
                 +     V +  Y  +P  +E  +KK VA + P+SV + A+G    +YS GV   
Sbjct: 237 ----CKKSPAPVVTIDGYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGVFSG 291

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  +  +H +  VGYG     DGT   YW+VKNSWG +WGEK
Sbjct: 292 R---CGTEL-DHGVAAVGYGVTA--DGTK--YWLVKNSWGPEWGEK 329



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 11/130 (8%)

Query: 69  FVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSN 128
           F  NV    ++ R D    +  +N+F D++  + ++    +  +     +   Q   +S 
Sbjct: 73  FKANVRLIHEFNRRDEPYKL-RLNRFGDMTADEFRRHYAGSRVAHHRMFRGDRQGSSASA 131

Query: 129 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
                  +F +   R   D+P + DWR +G ++ VK+QG+C  CWAFS +  VE ++AI+
Sbjct: 132 -------SFMYADAR---DVPASVDWRQKGAVTDVKDQGQCGSCWAFSTIAAVEGINAIK 181

Query: 189 GNNLTELSVQ 198
             NLT LS Q
Sbjct: 182 TKNLTSLSEQ 191


>gi|297819568|ref|XP_002877667.1| hypothetical protein ARALYDRAFT_348033 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323505|gb|EFH53926.1| hypothetical protein ARALYDRAFT_348033 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 341

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 147/287 (51%), Gaps = 33/287 (11%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNLDS 260
           +VYS   +   R E F  N++  E +    + T    VN+F DL++ + + + TGL    
Sbjct: 44  RVYSDDSEKTSRFEIFKKNLKFVESFNMNTNKTYTLDVNEFSDLTDEEFKARYTGL---- 99

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACC 320
               + P      S+  +  E  +F++ ++    +  E+ DWR EG ++ VK Q +C CC
Sbjct: 100 ----VVPEGMTRMSTTDSH-ETVSFRYENV---GETGESMDWREEGAVTSVKHQQQCGCC 151

Query: 321 WAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQ 380
           WAFSAV  VE M  I    L  LS QQL+DC   N GC+GG M  A  YI++N G+ ++ 
Sbjct: 152 WAFSAVAAVEGMTKIAKGELVSLSEQQLLDCSTENDGCDGGIMWKAFDYIVENQGITAED 211

Query: 381 AYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--L 438
            YPY+   +++ C           +  Y  +P  +EE + K V+ + P+SV +  +G   
Sbjct: 212 NYPYQG--AQQTCESNHVAA--ATISGYETVPQNDEEALLKAVSQQ-PVSVAIEGSGYEF 266

Query: 439 FYYSGGVID------LNQRL----YGTS---IPYWIVKNSWGSDWGE 472
            +YSGG+ +      LN  +    YG S   I YW++KNSWG  WGE
Sbjct: 267 IHYSGGIFNGECGTHLNHAVTIVGYGVSEEGIKYWLLKNSWGESWGE 313



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 15/164 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +T +   +L  L+ ++L+DC   N GC+GG M  A  YI++N G+ ++  YPY+   +++
Sbjct: 163 MTKIAKGELVSLSEQQLLDCSTENDGCDGGIMWKAFDYIVENQGITAEDNYPYQG--AQQ 220

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLN 607
            C           +  Y  +P  +EE + K V+ + P+SV +  +G    +YSGG+ +  
Sbjct: 221 TCESNHVAA--ATISGYETVPQNDEEALLKAVSQQ-PVSVAIEGSGYEFIHYSGGIFNGE 277

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              C     NHA+ IVGYG  E+     I YW++KNSWG  WGE
Sbjct: 278 ---CGTHL-NHAVTIVGYGVSEE----GIKYWLLKNSWGESWGE 313



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 13/161 (8%)

Query: 40  SPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSD 99
           S + +   +M    +VYS   +   R E F  N++  E +    + T   +VN+F DL+D
Sbjct: 30  SAIEKHEQWMSRFHRVYSDDSEKTSRFEIFKKNLKFVESFNMNTNKTYTLDVNEFSDLTD 89

Query: 100 SDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 158
            + + + TGL        + P      S+  +  E  +F++ ++    +  E+ DWR EG
Sbjct: 90  EEFKARYTGL--------VVPEGMTRMSTTDSH-ETVSFRYENV---GETGESMDWREEG 137

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            ++ VK Q +C CCWAFSAV  VE M  I    L  LS Q 
Sbjct: 138 AVTSVKHQQQCGCCWAFSAVAAVEGMTKIAKGELVSLSEQQ 178


>gi|205364757|gb|ACI04578.1| cysteine protease-like protein [Robinia pseudoacacia]
          Length = 335

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 150/316 (47%), Gaps = 64/316 (20%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R   F +NV +A+ +   D  +AV GV KF DL+
Sbjct: 16  LNAEHHFSTFKSKFSKTYATKEEHDYRFGVFKSNVRRAKLHAKLDP-SAVHGVTKFSDLT 74

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
            S+ + Q  GL      E  Q   +AP                      DLPE FDWR +
Sbjct: 75  PSEFRRQFLGLKPLRLPEHAQ---KAPILPTH-----------------DLPEDFDWRDK 114

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNG 356
           G ++ VK QG C  CWAFS  G +E  H +    L  LS QQLVDCD           + 
Sbjct: 115 GAVTHVKNQGSCGSCWAFSTTGALEGSHFLATGELVSLSDQQLVDCDHVCDPEQYGACDS 174

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M++A +YI+++GGV  ++ YPY     +RG  +  +E     V  +S +   +E
Sbjct: 175 GCNGGLMNNAFEYILESGGVQREEDYPYTG--RDRGPAI--DEANAASVSNFSVVSL-DE 229

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV---------IDLNQRLYG-----------TS 456
           +++   +   GPL++G+NA  +  Y GGV         +D    L G             
Sbjct: 230 DQISANLVKNGPLAIGINAVFMQTYIGGVSCPYICGKNLDHGVLLVGYGKAGYAPIRLKE 289

Query: 457 IPYWIVKNSWGSDWGE 472
            PYWI+KNSWG  WGE
Sbjct: 290 KPYWIIKNSWGESWGE 305



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 31/172 (18%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M++A +YI+++GGV  ++ YPY     
Sbjct: 148 ELVSLSDQQLVDCDHVCDPEQYGACDSGCNGGLMNNAFEYILESGGVQREEDYPYTG--R 205

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +RG  +  +E     V  +S +   +E+++   +   GPL++G+NA  +  Y GGV    
Sbjct: 206 DRGPAI--DEANAASVSNFSVVSL-DEDQISANLVKNGPLAIGINAVFMQTYIGGVS--C 260

Query: 608 QRLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
             +C  K  +H +++VGYG+        +EK      PYWI+KNSWG  WGE
Sbjct: 261 PYICG-KNLDHGVLLVGYGKAGYAPIRLKEK------PYWIIKNSWGESWGE 305



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 70/156 (44%), Gaps = 22/156 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F     K Y++ E+   R   F +NV +A+ + + D  +AV  V KF DL+ S+ +
Sbjct: 21  HFSTFKSKFSKTYATKEEHDYRFGVFKSNVRRAKLHAKLDP-SAVHGVTKFSDLTPSEFR 79

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  GL      E  Q   +AP                      DLPE FDWR +G ++ 
Sbjct: 80  RQFLGLKPLRLPEHAQ---KAPILPTH-----------------DLPEDFDWRDKGAVTH 119

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CWAFS  G +E  H +    L  LS Q
Sbjct: 120 VKNQGSCGSCWAFSTTGALEGSHFLATGELVSLSDQ 155


>gi|224102377|ref|XP_002312656.1| predicted protein [Populus trichocarpa]
 gi|222852476|gb|EEE90023.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 111/193 (57%), Gaps = 18/193 (9%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSN 355
           LP + DWR  G ++ +K+QGKC  CWAFS V  VE ++ I+   L  LS Q+LVDCD  N
Sbjct: 127 LPSSVDWRKNGAVTGIKDQGKCGSCWAFSTVAAVEGINKIKTGELISLSEQELVDCDSDN 186

Query: 356 GGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGE 415
            GCNGG M+DA  +I   GG+ S+  YPY+A E    C   +     V +  Y  +P  +
Sbjct: 187 HGCNGGLMEDAFNFIKQIGGLTSENTYPYRAKEEP--CDSNKMNSPVVNIDGYEMVPEND 244

Query: 416 EEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTS---IPYW 460
           E  + K VA + P+++ M+A G  L +YS  +       +LN  +    YGT+     YW
Sbjct: 245 ENALMKAVANQ-PVAIAMDAGGKDLQFYSEAIFTGDCGTELNHGVALVGYGTTQDGTKYW 303

Query: 461 IVKNSWGSDWGEK 473
           IVKNSWG+DWGEK
Sbjct: 304 IVKNSWGTDWGEK 316



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 92/167 (55%), Gaps = 17/167 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  +   +L  L+ ++LVDCD  N GCNGG M+DA  +I   GG+ S+  YPY+A E   
Sbjct: 163 INKIKTGELISLSEQELVDCDSDNHGCNGGLMEDAFNFIKQIGGLTSENTYPYRAKEEP- 221

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI--D 605
            C   +     V +  Y  +P  +E  + K VA + P+++ M+A G  L +YS  +   D
Sbjct: 222 -CDSNKMNSPVVNIDGYEMVPENDENALMKAVANQ-PVAIAMDAGGKDLQFYSEAIFTGD 279

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               L      NH + +VGYG  +  DGT   YWIVKNSWG+DWGEK
Sbjct: 280 CGTEL------NHGVALVGYGTTQ--DGTK--YWIVKNSWGTDWGEK 316



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 15/149 (10%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  S+ +   R   F  N++       +D    + ++N F D+++ +  Q  G +
Sbjct: 44  RSHHTVSRSLAEKQERFNVFKENLKHIHKVNHKDRPYKL-KLNSFADMTNHEFLQHYGGS 102

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             S    ++   Q   S ++  ++              LP + DWR  G ++ +K+QGKC
Sbjct: 103 KVSHYRVLRGQRQGTGSMHEDTSK--------------LPSSVDWRKNGAVTGIKDQGKC 148

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+   L  LS Q
Sbjct: 149 GSCWAFSTVAAVEGINKIKTGELISLSEQ 177


>gi|400180437|gb|AFP73356.1| cysteine protease [Solanum pennellii]
          Length = 337

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 148/294 (50%), Gaps = 40/294 (13%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++     P                    N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSYLSPSP-------------------INDLSD-DDMPSNLDWRESGAVTQVK 139

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 140 NQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 199

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 200 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 254

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 255 IAASQDLQFYAGGTYDGSCANRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 308



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     ++   
Sbjct: 162 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---QQYTC 218

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 219 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 273

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 274 ANRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 308



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 27/189 (14%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MSILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++     P          
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSP---------- 114

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                     N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 115 ---------INDLSD-DDMPSNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIAT 164

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 165 GNLMEFSEQ 173


>gi|172052260|gb|ACB70409.1| cysteine protease [Nicotiana tabacum]
          Length = 361

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 149/290 (51%), Gaps = 33/290 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H  V  S+++  +R   F  NV    ++  +D    +  +NKF D++  + +        
Sbjct: 44  HHTVSRSLDEKDKRFNVFKANVHYVHNFNKKDKPYKL-KLNKFADMTNHEFRHHYA---G 99

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S ++  +  L A   S    T M A       H D +P   DWR +G ++ VK+QGKC  
Sbjct: 100 SKIKHHRTFLGA---SRANGTFMYA-------HEDSVPPTVDWRKKGAVTPVKDQGKCGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS V  VE ++ I+ N L  LS Q+LVDCD S N GCNGG MD A ++I   GG+ +
Sbjct: 150 CWAFSTVVAVEGINQIKTNELVSLSEQELVDCDTSQNQGCNGGLMDMAFEFIKKKGGINT 209

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG- 437
           ++ YPY A   E  C + +     V +  +  +P  +E  + K VA + P+SV + A+G 
Sbjct: 210 EENYPYMAEGGE--CDIQKRNSPVVSIDGHEDVPPNDEGSLLKAVANQ-PVSVAIQASGS 266

Query: 438 -LFYYSGGVI--DLNQRL--------YGTSI---PYWIVKNSWGSDWGEK 473
              +YS GV   D    L        YGT++    YWIVKNSWG +WGEK
Sbjct: 267 DFQFYSEGVFTGDCGTELDHGVAIVGYGTTLDRTKYWIVKNSWGPEWGEK 316



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 91/168 (54%), Gaps = 18/168 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +  ++L  L+ ++LVDCD S N GCNGG MD A ++I   GG+ +++ YPY A   E
Sbjct: 162 INQIKTNELVSLSEQELVDCDTSQNQGCNGGLMDMAFEFIKKKGGINTEENYPYMAEGGE 221

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI-- 604
             C + +     V +  +  +P  +E  + K VA + P+SV + A+G    +YS GV   
Sbjct: 222 --CDIQKRNSPVVSIDGHEDVPPNDEGSLLKAVANQ-PVSVAIQASGSDFQFYSEGVFTG 278

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           D    L      +H + IVGYG    +      YWIVKNSWG +WGEK
Sbjct: 279 DCGTEL------DHGVAIVGYGTTLDR----TKYWIVKNSWGPEWGEK 316



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  S+++  +R   F  NV    ++ ++D    + ++NKF D+++ + +      
Sbjct: 42  RSHHTVSRSLDEKDKRFNVFKANVHYVHNFNKKDKPYKL-KLNKFADMTNHEFRHHYA-- 98

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             S ++  +  L A   S    T M A       H D +P   DWR +G ++ VK+QGKC
Sbjct: 99  -GSKIKHHRTFLGA---SRANGTFMYA-------HEDSVPPTVDWRKKGAVTPVKDQGKC 147

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 148 GSCWAFSTVVAVEGINQIKTNELVSLSEQ 176


>gi|20334375|gb|AAM19208.1|AF493233_1 cysteine protease [Solanum pennellii]
          Length = 337

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 148/294 (50%), Gaps = 40/294 (13%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQ 252
           EL +  H +VY    +   R   F  N++  E      + +   G+N+F D++  + L +
Sbjct: 40  ELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAK 99

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
            TGLN+ ++     P                    N L   DD+P   DWR  G +++VK
Sbjct: 100 FTGLNIPNSYLSPSP-------------------INDLSD-DDMPSNLDWRESGAVTQVK 139

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
            QG+C CCWAFSAVG +E  + I   +L E S Q+L+DC  +N GCNGG M +A  +I +
Sbjct: 140 NQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKE 199

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+  +  Y Y     ++     +E+   V++  Y  +P GE   ++    T+ P+S+G
Sbjct: 200 NGGISRESDYEYLG---QQYTCRSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIG 254

Query: 433 MNAN-GLFYYSGGVID------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           + A+  L +Y+GG  D      +N  +    YGT      YW++KNSWG+ WGE
Sbjct: 255 IAASQDLQFYAGGTYDGSCANRINHAVTAIGYGTDEKGQKYWLLKNSWGTSWGE 308



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L   + ++L+DC  +N GCNGG M +A  +I +NGG+  +  Y Y     ++   
Sbjct: 162 IATGNLMEFSEQELLDCTTNNYGCNGGFMTNAFDFIKENGGISRESDYEYLG---QQYTC 218

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLC 611
             +E+   V++  Y  +P GE   ++    T+ P+S+G+ A+  L +Y+GG  D +   C
Sbjct: 219 RSQEKTAAVQISSYQVVPEGETSLLQ--AVTKQPVSIGIAASQDLQFYAGGTYDGS---C 273

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             +  NHA+  +GYG +EK       YW++KNSWG+ WGE
Sbjct: 274 ANRI-NHAVTAIGYGTDEKGQ----KYWLLKNSWGTSWGE 308



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 27/189 (14%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFV 70
           +  L T    +++  +   QTRG     ++   R   +M  H +VY    +   R   F 
Sbjct: 8   MSILITLFFVISMFNT---QTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFK 64

Query: 71  TNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQ 129
            N++  E   +  + +    +N+F D++  + L + TGLN+ ++     P          
Sbjct: 65  ENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSP---------- 114

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
                     N L   DD+P   DWR  G +++VK QG+C CCWAFSAVG +E  + I  
Sbjct: 115 ---------INDLSD-DDMPSNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIAT 164

Query: 190 NNLTELSVQ 198
            NL E S Q
Sbjct: 165 GNLMEFSEQ 173


>gi|356543122|ref|XP_003540012.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 342

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 142/292 (48%), Gaps = 33/292 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ + KVY    +  +R   F  NVE  E + +  +      +N   D +  +       
Sbjct: 42  MEKYGKVYKDSAEXEKRFLIFENNVEFIESFNAAGNKPYKLSINHLADQTNEEFMASHKG 101

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              S  + ++ + Q PF                     D+P A DWR +G  + +K+QG+
Sbjct: 102 YKGSHWQGLRITTQTPFKYENVT---------------DIPWAVDWRQKGDATSIKDQGQ 146

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFSAV   E ++ I   +L  LS Q+LVDCD  + GC+GG M+   ++II NGG+
Sbjct: 147 CGICWAFSAVAATEGIYQITTGNLVSLSEQELVDCDSVDHGCDGGLMEHGFEFIIKNGGI 206

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            S+  YPY A      C   +E     ++K Y  +P   EEE++K VA + P+SV ++A 
Sbjct: 207 SSEANYPYTAVNGT--CDTNKEASPGAQIKGYETVPVNCEEELQKAVANQ-PVSVSIDAG 263

Query: 437 G--LFYYSGGVID----------LNQRLYGTS---IPYWIVKNSWGSDWGEK 473
           G    +YS GV            +    YG++   I YWIVKNSWG+ WGE+
Sbjct: 264 GSAFQFYSSGVFTGQCGTQLDHGVTAVGYGSTDDGIQYWIVKNSWGTQWGEE 315



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 13/162 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L  L+ ++LVDCD  + GC+GG M+   ++II NGG+ S+  YPY A      C 
Sbjct: 165 ITTGNLVSLSEQELVDCDSVDHGCDGGLMEHGFEFIIKNGGISSEANYPYTAVNGT--CD 222

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRL 610
             +E     ++K Y  +P   EEE++K VA + P+SV ++A G    +YS GV       
Sbjct: 223 TNKEASPGAQIKGYETVPVNCEEELQKAVANQ-PVSVSIDAGGSAFQFYSSGVFTGQ--- 278

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           C  +  +H +  VGYG  +  DG  I YWIVKNSWG+ WGE+
Sbjct: 279 CGTQL-DHGVTAVGYGSTD--DG--IQYWIVKNSWGTQWGEE 315



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 15/155 (9%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY    +  +R   F  NVE  E +    +      +N   D ++ +  
Sbjct: 37  RHEQWMEKYGKVYKDSAEXEKRFLIFENNVEFIESFNAAGNKPYKLSINHLADQTNEEFM 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   S  + ++ + Q PF                     D+P A DWR +G  + +
Sbjct: 97  ASHKGYKGSHWQGLRITTQTPFKYENVT---------------DIPWAVDWRQKGDATSI 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFSAV   E ++ I   NL  LS Q
Sbjct: 142 KDQGQCGICWAFSAVAATEGIYQITTGNLVSLSEQ 176


>gi|334324655|ref|XP_001370975.2| PREDICTED: cathepsin S-like isoform 1 [Monodelphis domestica]
          Length = 331

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/249 (38%), Positives = 130/249 (52%), Gaps = 32/249 (12%)

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
           +DLS + L  +T   + S +     SL+ P   N+  T         L     LP++ DW
Sbjct: 73  YDLSMNHLGDMTSEEVISLMS----SLRIPNQWNRNTTY-------RLSSNQKLPDSVDW 121

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---SNGGCN 359
           R +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC      N GCN
Sbjct: 122 REKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTDKYDNHGCN 181

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG M  A QY+IDN G+ SD +YPYKA++   G              +Y+ +PYG EE +
Sbjct: 182 GGFMTSAFQYVIDNNGIDSDVSYPYKATD---GKCQYNPASRAATCSKYTELPYGSEEAL 238

Query: 420 KKWVATRGPLSVGMNAN--GLFYYSGGVI---DLNQRL--------YGT--SIPYWIVKN 464
           K+ VA +GP+SVG++A     F Y  GV       Q++        YG      YW+VKN
Sbjct: 239 KEAVANKGPVSVGIDAKTPSFFLYKSGVYYDPSCTQKVNHGVLVIGYGNLDGQDYWLVKN 298

Query: 465 SWGSDWGEK 473
           SWG  +G+K
Sbjct: 299 SWGLHFGDK 307



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDMS---NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QY+IDN G+ SD +YPYKA++   G   
Sbjct: 158 KLVSLSAQNLVDCSTDKYDNHGCNGGFMTSAFQYVIDNNGIDSDVSYPYKATD---GKCQ 214

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
                      +Y+ +PYG EE +K+ VA +GP+SVG++A     F Y  GV       C
Sbjct: 215 YNPASRAATCSKYTELPYGSEEALKEAVANKGPVSVGIDAKTPSFFLYKSGV--YYDPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             K  NH ++++GYG  + +D     YW+VKNSWG  +G+K
Sbjct: 273 TQKV-NHGVLVIGYGNLDGQD-----YWLVKNSWGLHFGDK 307



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 11/104 (10%)

Query: 95  FDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 154
           +DLS + L  +T   + S +     SL+ P   N+  T         L     LP++ DW
Sbjct: 73  YDLSMNHLGDMTSEEVISLMS----SLRIPNQWNRNTTY-------RLSSNQKLPDSVDW 121

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           R +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 122 REKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQ 165


>gi|226533314|ref|NP_001150119.1| xylem cysteine proteinase 2 [Zea mays]
 gi|195636886|gb|ACG37911.1| xylem cysteine proteinase 2 precursor [Zea mays]
 gi|223946183|gb|ACN27175.1| unknown [Zea mays]
 gi|413951209|gb|AFW83858.1| Xylem cysteine proteinase 2 [Zea mays]
          Length = 385

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 161/310 (51%), Gaps = 38/310 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H + Y+S+E+ LRR + F  N+   ++   + S +   G+N+F DL+  + +
Sbjct: 58  LFERWLSRHRRAYASLEEKLRRFQVFKDNLHHIDETNRKVS-SYWLGLNEFADLTHDEFK 116

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
                   +T   ++ S+    S    D E    +      G  LP++ DWR++G ++ V
Sbjct: 117 --------ATYLGLRSSVGDGGSGIDDDDEPEEEEGYEGVDGASLPKSVDWRSKGAVTGV 168

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYI 370
           K QG+C  CWAFS V  VE ++ I   +LT LS Q+L+DCD   N GCNGG MD A  YI
Sbjct: 169 KNQGQCGSCWAFSTVAAVEGINQIVTGNLTALSEQELIDCDTDGNNGCNGGLMDYAFSYI 228

Query: 371 IDNGGVVSDQAYPY--------KASESERGCLVGEE----EGFKVKVKEYSRIPYGEEEE 418
             NGG+ +++AYPY        ++S SE+      E    +   V +  Y  +P   E+ 
Sbjct: 229 AHNGGLHTEEAYPYLMEEGTCQRSSSSEKKWPGSSEDANDDAAVVTISGYEDVPRNNEQA 288

Query: 419 MKKWVATRGPLSVGMNANG--LFYYSGGVID------LNQRL----YGTSIP---YWIVK 463
           + K +A + P+SV + A+G    +YSGGV D      L+  +    YGT+     Y IVK
Sbjct: 289 LLKALAQQ-PVSVAIEASGRNFQFYSGGVFDGPCGTQLDHGVAAVGYGTAAKGHDYIIVK 347

Query: 464 NSWGSDWGEK 473
           NSWG  WGEK
Sbjct: 348 NSWGPSWGEK 357



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 24/175 (13%)

Query: 493 VLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPY--------K 543
           ++   L+ L+ ++L+DCD   N GCNGG MD A  YI  NGG+ +++AYPY        +
Sbjct: 192 IVTGNLTALSEQELIDCDTDGNNGCNGGLMDYAFSYIAHNGGLHTEEAYPYLMEEGTCQR 251

Query: 544 ASESERGCLVGEE----EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LF 597
           +S SE+      E    +   V +  Y  +P   E+ + K +A + P+SV + A+G    
Sbjct: 252 SSSSEKKWPGSSEDANDDAAVVTISGYEDVPRNNEQALLKALAQQ-PVSVAIEASGRNFQ 310

Query: 598 YYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +YSGGV D     C  +  +H +  VGYG   K       Y IVKNSWG  WGEK
Sbjct: 311 FYSGGVFD---GPCGTQL-DHGVAAVGYGTAAKGH----DYIIVKNSWGPSWGEK 357



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 9/154 (5%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  ++  H + Y+S+E+ LRR + F  N+   ++  R+ S +    +N+F DL+  + + 
Sbjct: 59  FERWLSRHRRAYASLEEKLRRFQVFKDNLHHIDETNRKVS-SYWLGLNEFADLTHDEFK- 116

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                  +T   ++ S+    S    D E    +      G  LP++ DWR++G ++ VK
Sbjct: 117 -------ATYLGLRSSVGDGGSGIDDDDEPEEEEGYEGVDGASLPKSVDWRSKGAVTGVK 169

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG+C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 170 NQGQCGSCWAFSTVAAVEGINQIVTGNLTALSEQ 203


>gi|50355617|dbj|BAD29957.1| cysteine protease [Daucus carota]
          Length = 437

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 42/304 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+++ +   R + F  N+   +++ ++   +   G+N+F DL+    ++     L 
Sbjct: 56  HGKSYNALGEKETRFQIFKDNLRYIDNHNADPDRSYELGLNRFADLTN---EEYRAKYLG 112

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +   + +P L    S      E           G++LP++ DWR +G ++ VK+QG C  
Sbjct: 113 TKSRESRPKLSKGPSDRYAPVE-----------GEELPDSIDWREKGAVAAVKDQGSCGS 161

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFSA+G VE ++ I    L  LS Q+LVDCD S N GC GG MD A  +II NGG+ S
Sbjct: 162 CWAFSAIGAVEGINQITTGELITLSEQELVDCDRSYNEGCEGGLMDYAFNFIIKNGGIDS 221

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           D  YPY   +    C   +E    V +  Y  +P  +E+ ++K  A + P+SV + A G+
Sbjct: 222 DLDYPYTGRDGT--CNQNKENAKVVTIDSYEDVPVYDEKALQKAAANQ-PISVAIEAGGM 278

Query: 439 ---FYYSG------------GVIDLNQRLYGT--SIPYWIVKNSWGSDWGE----KVEDK 477
               Y SG            GV+ +    YG+   + YWIV+NSWG+ WGE    K++  
Sbjct: 279 DFQLYVSGIFTGKCGTAVDHGVVVVG---YGSEEGMDYWIVRNSWGAAWGEAGYLKMQRN 335

Query: 478 VGSS 481
           VG S
Sbjct: 336 VGKS 339



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 90/167 (53%), Gaps = 17/167 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   +L  L+ ++LVDCD S N GC GG MD A  +II NGG+ SD  YPY   +    C
Sbjct: 177 ITTGELITLSEQELVDCDRSYNEGCEGGLMDYAFNFIIKNGGIDSDLDYPYTGRDGT--C 234

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLNQ 608
              +E    V +  Y  +P  +E+ ++K  A + P+SV + A G+    Y SG    +  
Sbjct: 235 NQNKENAKVVTIDSYEDVPVYDEKALQKAAANQ-PISVAIEAGGMDFQLYVSG----IFT 289

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
             C   A +H +++VGYG EE  D     YWIV+NSWG+ WGE   L
Sbjct: 290 GKCG-TAVDHGVVVVGYGSEEGMD-----YWIVRNSWGAAWGEAGYL 330



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 14/157 (8%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +T + +++  H K Y+++ +   R + F  N+   +++  +   +    +N+F DL++  
Sbjct: 46  MTMYNSWLVKHGKSYNALGEKETRFQIFKDNLRYIDNHNADPDRSYELGLNRFADLTN-- 103

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            ++     L +   + +P L    S      E           G++LP++ DWR +G ++
Sbjct: 104 -EEYRAKYLGTKSRESRPKLSKGPSDRYAPVE-----------GEELPDSIDWREKGAVA 151

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CWAFSA+G VE ++ I    L  LS Q
Sbjct: 152 AVKDQGSCGSCWAFSAIGAVEGINQITTGELITLSEQ 188


>gi|357471211|ref|XP_003605890.1| Cysteine proteinase [Medicago truncatula]
 gi|355506945|gb|AES88087.1| Cysteine proteinase [Medicago truncatula]
          Length = 343

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 38/295 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTA-VFGVNKFFDLSESDLQQLTG 255
           +  + KVY   ++  +R + F  NV   E +   D+      GVN+F DL+  +      
Sbjct: 42  MSQYGKVYKDSQEREKRFKIFTENVNYIEAFNKGDNNKLYTLGVNQFADLTNDEF----- 96

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
                       S +  F  +   +  R   F    +   +P + DWR +G ++ VK QG
Sbjct: 97  -----------TSSRNKFKGHMCSSITRTSTF-KYENASAIPSSVDWRKKGAVTPVKNQG 144

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDN 373
           +C CCWAFSAV   E +H +    L  LS Q+LVDCD    + GC GG MDDA ++II N
Sbjct: 145 QCGCCWAFSAVAATEGIHKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQN 204

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++  YPY+  +    C   +     V +  Y  +P   E+ ++K VA + P+SV +
Sbjct: 205 HGLNTEANYPYQGVDGT--CNANKGSINAVTITGYEDVPTNNEQALQKAVANQ-PISVAI 261

Query: 434 NANG---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           +A+G    FY SG            GV  +   +      YW+VKNSWG++WGE+
Sbjct: 262 DASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSNDGTKYWLVKNSWGTEWGEE 316



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG MDDA ++II N G+ ++  YPY+  +    C   
Sbjct: 168 KLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEANYPYQGVDGT--CNAN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +     V +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 226 KGSINAVTITGYEDVPTNNEQALQKAVANQ-PISVAIDASGSDFQFYKSGVFTGS---CG 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG++WGE+
Sbjct: 282 TEL-DHGVTAVGYGVS--NDGT--KYWLVKNSWGTEWGEE 316



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 16/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   ++  +R + F  NV   E + + D+       NK + L  +   
Sbjct: 37  RHRQWMSQYGKVYKDSQEREKRFKIFTENVNYIEAFNKGDN-------NKLYTLGVNQFA 89

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            LT     S+    +  + +  +   T      F++    +   +P + DWR +G ++ V
Sbjct: 90  DLTNDEFTSSRNKFKGHMCSSITRTST------FKY---ENASAIPSSVDWRKKGAVTPV 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG+C CCWAFSAV   E +H +    L  LS Q
Sbjct: 141 KNQGQCGCCWAFSAVAATEGIHKLSTGKLISLSEQ 175


>gi|33242884|gb|AAQ01146.1| cathepsin [Petromyzon marinus]
          Length = 333

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/295 (35%), Positives = 146/295 (49%), Gaps = 40/295 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQS-EDSGTAVF--GVNKFFDLSESDLQQLTGL 256
           + K Y S ++   R + F  N+++   +    D G   F  G+NK+ DL           
Sbjct: 34  YGKHYGSEQEDAHRRDVFEQNLKRVLQHNLLADEGNVSFHLGINKYSDLE---------- 83

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                L +    +   F + +  T  R   F  LR  D+LPE  DWR +G ++ VKEQG 
Sbjct: 84  -----LHEYHEKVVGRFWNLRNGTRRRGAPF-PLRSMDNLPEQVDWRLKGYVTPVKEQGL 137

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C   WAFSA G +E  H     +LT LS QQLVDC  S  N GCNGGR + ALQYIIDN 
Sbjct: 138 CGSSWAFSATGSLEGQHFAATGNLTSLSEQQLVDCTKSYYNNGCNGGRSERALQYIIDNN 197

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI-PYGEEEEMKKWVATRGPLSVGM 433
           G+ S+ +YPY+ ++   G    +      K   Y  + P   EE +++ VA+ GP+++ M
Sbjct: 198 GIDSELSYPYEHAD---GKCRFKPANVATKCSSYQFVEPSSNEEVLRQAVASVGPIAIAM 254

Query: 434 NAN---------GLFYYSGGVIDLNQRL----YG--TSIPYWIVKNSWGSDWGEK 473
           NA+         GLF         N  +    YG  +   +WIVKNSWG DWGEK
Sbjct: 255 NADLDTFKHYKSGLFNEPSCDKSPNHAMLVVGYGSLSGNDFWIVKNSWGEDWGEK 309



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 16/160 (10%)

Query: 498 LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ ++LVDC  S  N GCNGGR + ALQYIIDN G+ S+ +YPY+ ++   G    +
Sbjct: 161 LTSLSEQQLVDCTKSYYNNGCNGGRSERALQYIIDNNGIDSELSYPYEHAD---GKCRFK 217

Query: 556 EEGFKVKVKEYSRI-PYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
                 K   Y  + P   EE +++ VA+ GP+++ MNA  +   +Y  G+   N+  C+
Sbjct: 218 PANVATKCSSYQFVEPSSNEEVLRQAVASVGPIAIAMNADLDTFKHYKSGL--FNEPSCD 275

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            K+ NHA+++VGYG     D     +WIVKNSWG DWGEK
Sbjct: 276 -KSPNHAMLVVGYGSLSGND-----FWIVKNSWGEDWGEK 309



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 19/150 (12%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQR-EDSGTAVFE--VNKFFDLSDSDLQQLTGL 108
           + K Y S ++   R + F  N+++   +    D G   F   +NK+ DL           
Sbjct: 34  YGKHYGSEQEDAHRRDVFEQNLKRVLQHNLLADEGNVSFHLGINKYSDLE---------- 83

Query: 109 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 168
                L +    +   F + +  T  R   F  LR  D+LPE  DWR +G ++ VKEQG 
Sbjct: 84  -----LHEYHEKVVGRFWNLRNGTRRRGAPF-PLRSMDNLPEQVDWRLKGYVTPVKEQGL 137

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           C   WAFSA G +E  H     NLT LS Q
Sbjct: 138 CGSSWAFSATGSLEGQHFAATGNLTSLSEQ 167


>gi|168059933|ref|XP_001781954.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666600|gb|EDQ53250.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 152/326 (46%), Gaps = 57/326 (17%)

Query: 180 VVEAMHAIQG-NNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFG 238
           V +  HA+ G     E  ++   KVY +VE+   R + F +N+ +A  +Q+ D  TA  G
Sbjct: 42  VEQFAHALLGAEKQFESFIKEFGKVYHTVEEYEHRFKVFKSNLLRALKHQALDP-TASHG 100

Query: 239 VNKFFDLSESDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLP 297
           V  F DL+E +   Q  GL   S L     +   P                      DLP
Sbjct: 101 VTMFSDLTEEEFATQYLGLKRPSALSTAPTAEPLPTG--------------------DLP 140

Query: 298 EAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----- 352
            +FDWR +G +  VK QG C  CWAFS  G VE  H +    L  LS QQLVDCD     
Sbjct: 141 PSFDWREKGAVGPVKNQGSCGSCWAFSTTGAVEGAHFLATGKLLSLSEQQLVDCDHQCDP 200

Query: 353 ----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEY 408
                 + GC GG M +A +Y+ + GG+  +  YPYK  + +  C     +    KV  +
Sbjct: 201 EEAQACDAGCGGGLMTNAYKYVEEAGGLELESDYPYKGRDGK--CQFNPNK-VAAKVSNF 257

Query: 409 SRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQR-------LYGTS-- 456
           + IP  +E+++  ++   GPL++G+NA  +  Y  GV   I  N+R       L G +  
Sbjct: 258 TNIPI-DEDQVAAYLIKSGPLAIGINAEFMQTYVAGVSCPIFCNKRNLDHGVLLVGYAEH 316

Query: 457 ---------IPYWIVKNSWGSDWGEK 473
                     PYWI+KNSWG  WG+K
Sbjct: 317 GFAPARLAYKPYWIIKNSWGPMWGDK 342



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 17/167 (10%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GC GG M +A +Y+ + GG+  +  YPYK  + 
Sbjct: 182 KLLSLSEQQLVDCDHQCDPEEAQACDAGCGGGLMTNAYKYVEEAGGLELESDYPYKGRDG 241

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +  C     +    KV  ++ IP  +E+++  ++   GPL++G+NA  +  Y  GV    
Sbjct: 242 K--CQFNPNK-VAAKVSNFTNIPI-DEDQVAAYLIKSGPLAIGINAEFMQTYVAGVS--C 295

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDG--TSIPYWIVKNSWGSDWGEK 652
              CN +  +H +++VGY E           PYWI+KNSWG  WG+K
Sbjct: 296 PIFCNKRNLDHGVLLVGYAEHGFAPARLAYKPYWIIKNSWGPMWGDK 342



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 71/157 (45%), Gaps = 22/157 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL- 102
           +F +F+++  KVY +VE+   R + F +N+ +A  +Q  D  TA   V  F DL++ +  
Sbjct: 55  QFESFIKEFGKVYHTVEEYEHRFKVFKSNLLRALKHQALDP-TASHGVTMFSDLTEEEFA 113

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  GL   S L     +   P                      DLP +FDWR +G +  
Sbjct: 114 TQYLGLKRPSALSTAPTAEPLPTG--------------------DLPPSFDWREKGAVGP 153

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK QG C  CWAFS  G VE  H +    L  LS Q 
Sbjct: 154 VKNQGSCGSCWAFSTTGAVEGAHFLATGKLLSLSEQQ 190


>gi|2961621|gb|AAC05781.1| cathepsin S [Mus musculus]
          Length = 340

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 133/234 (56%), Gaps = 26/234 (11%)

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
           D T E+I   + A   S Q+   +  F+  S R    LP+  DWR +G +++VK QG C 
Sbjct: 90  DMTNEEISCRMGALRISRQSPKTV-TFRSYSNR---TLPDTVDWREKGCVTEVKYQGSCG 145

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----MSNGGCNGGRMDDALQYIIDNG 374
            CWAFSAVG +E    ++   L  LS Q LVDC       N GC GG M +A QYIIDNG
Sbjct: 146 ACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNG 205

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ +D +YPYKA++ +  C    +         Y ++P+G+E+ +K+ VAT+GP+SVG++
Sbjct: 206 GIEADASYPYKATDEK--CHYNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSVGID 262

Query: 435 A--NGLFYYSGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           A  +  F+Y  GV D       +N  +    YGT     YW+VKNSWG ++G++
Sbjct: 263 ASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQ 316



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 99/165 (60%), Gaps = 23/165 (13%)

Query: 497 KLSRLATEKLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           KL  L+ + LVDC       N GC GG M +A QYIIDNGG+ +D +YPYKA++ +  C 
Sbjct: 166 KLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEK--CH 223

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRL 610
              +         Y ++P+G+E+ +K+ VAT+GP+SVG++A  +  F+Y  GV D     
Sbjct: 224 YNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD----- 277

Query: 611 CNPKAQ---NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +P      NH +++VGYG  + KD     YW+VKNSWG ++G++
Sbjct: 278 -DPSCTGNVNHGVLVVGYGTLDGKD-----YWLVKNSWGLNFGDQ 316



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 4/89 (4%)

Query: 111 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 170
           D T E+I   + A   S Q+   +  F+  S R    LP+  DWR +G +++VK QG C 
Sbjct: 90  DMTNEEISCRMGALRISRQSPKTV-TFRSYSNR---TLPDTVDWREKGCVTEVKYQGSCG 145

Query: 171 CCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            CWAFSAVG +E    ++   L  LS Q+
Sbjct: 146 ACWAFSAVGALEGQLKLKTGKLISLSAQN 174


>gi|356545108|ref|XP_003540987.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 365

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 158/327 (48%), Gaps = 63/327 (19%)

Query: 184 MHAIQGNNLTELSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTA 235
           M  + G ++  L  +HH         K Y S ++   R++ F  N+ +A  +QS D  +A
Sbjct: 34  MQVVDGGDV-RLGAEHHFLEFKRRFGKAYDSEDEHDYRYKVFKANMRRARRHQSLDP-SA 91

Query: 236 VFGVNKFFDLSESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD 294
             GV +F DL+ S+ + ++ GL            ++ P  +N+            +   D
Sbjct: 92  AHGVTRFSDLTPSEFRNKVLGLR----------GVRLPLDANKA----------PILPTD 131

Query: 295 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM- 353
           +LP  FDWR  G ++ VK QG C  CW+FS  G +E  H +    L  LS QQLVDCD  
Sbjct: 132 NLPSDFDWRDHGAVTPVKNQGSCGSCWSFSTTGALEGAHFLSTGELVSLSEQQLVDCDHE 191

Query: 354 --------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKV 405
                    + GCNGG M+ A +YI+ +GGV+ ++ YPY  ++S  G    ++      V
Sbjct: 192 CDPEEPGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPYSGADS--GTCKFDKTKIAASV 249

Query: 406 KEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQRL--------YG 454
             +S +   +E+++   +   GPL+V +NA  +  Y GGV      ++RL        YG
Sbjct: 250 ANFSVVSL-DEDQIAANLVKNGPLAVAINAAYMQTYIGGVSCPYVCSRRLNHGVLLVGYG 308

Query: 455 TSI---------PYWIVKNSWGSDWGE 472
           +           P+WI+KNSWG +WGE
Sbjct: 309 SGAYAPIRMKEKPFWIIKNSWGENWGE 335



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 45/225 (20%)

Query: 447 DLNQRLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS-KLSRLAT 503
           D + R +G   P   VKN  S GS W          S + T  LE    L + +L  L+ 
Sbjct: 136 DFDWRDHGAVTP---VKNQGSCGSCW----------SFSTTGALEGAHFLSTGELVSLSE 182

Query: 504 EKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           ++LVDCD           + GCNGG M+ A +YI+ +GGV+ ++ YPY  ++S  G    
Sbjct: 183 QQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPYSGADS--GTCKF 240

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           ++      V  +S +   +E+++   +   GPL+V +NA  +  Y GGV      +C+ +
Sbjct: 241 DKTKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAAYMQTYIGGVS--CPYVCS-R 296

Query: 615 AQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
             NH +++VGYG         +EK      P+WI+KNSWG +WGE
Sbjct: 297 RLNHGVLLVGYGSGAYAPIRMKEK------PFWIIKNSWGENWGE 335



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 22/157 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            FL F R   K Y S ++   R++ F  N+ +A  +Q  D  +A   V +F DL+ S+ +
Sbjct: 49  HFLEFKRRFGKAYDSEDEHDYRYKVFKANMRRARRHQSLDP-SAAHGVTRFSDLTPSEFR 107

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            ++ GL            ++ P  +N+            +   D+LP  FDWR  G ++ 
Sbjct: 108 NKVLGLR----------GVRLPLDANKA----------PILPTDNLPSDFDWRDHGAVTP 147

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK QG C  CW+FS  G +E  H +    L  LS Q 
Sbjct: 148 VKNQGSCGSCWSFSTTGALEGAHFLSTGELVSLSEQQ 184


>gi|146215998|gb|ABQ10201.1| cysteine protease Cp3 [Actinidia deliciosa]
          Length = 365

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 156/322 (48%), Gaps = 52/322 (16%)

Query: 180 VVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGV 239
           +V+  H +  ++   L  +   K Y++ ED   R   F TN+ +A  +Q  D  +AV GV
Sbjct: 37  IVDGDHPLSADHHFRLFKRRFGKSYATQEDHDYRFSVFKTNLRRARHHQRLDP-SAVHGV 95

Query: 240 NKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEA 299
            +F DL+ ++ ++   L L          L+ P  +N+            +   +DLP  
Sbjct: 96  TQFSDLTPAEFRR-NHLGLKR--------LRFPADANKA----------PILPTEDLPAD 136

Query: 300 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM------ 353
           FDWR  G ++ VK QG C  CW+FS  G +E  + +    L  LS QQLVDCD       
Sbjct: 137 FDWRDHGAVASVKNQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEE 196

Query: 354 ---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 410
               + GCNGG M+ AL+Y +  GG++ ++ YPY  S ++RG    +E      V  +S 
Sbjct: 197 PGSCDSGCNGGLMNSALEYTLKAGGLMREEDYPY--SGTDRGTCKFDETKIAASVANFSV 254

Query: 411 IPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQRL--------YGTS--- 456
           +   +E ++   +   GPL+V +NA  +  Y GGV      ++RL        YG++   
Sbjct: 255 VSL-DENQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICSKRLDHGVLLVGYGSAGYA 313

Query: 457 ------IPYWIVKNSWGSDWGE 472
                  PYWI+KNSWG  WGE
Sbjct: 314 PIRMKEKPYWIIKNSWGESWGE 335



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 91/172 (52%), Gaps = 29/172 (16%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GCNGG M+ AL+Y +  GG++ ++ YPY  S +
Sbjct: 176 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSALEYTLKAGGLMREEDYPY--SGT 233

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +RG    +E      V  +S +   +E ++   +   GPL+V +NA  +  Y GGV    
Sbjct: 234 DRGTCKFDETKIAASVANFSVVSL-DENQIAANLVKNGPLAVAINAVFMQTYVGGVS--C 290

Query: 608 QRLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ K  +H +++VGYG         +EK      PYWI+KNSWG  WGE
Sbjct: 291 PYICS-KRLDHGVLLVGYGSAGYAPIRMKEK------PYWIIKNSWGESWGE 335



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 20/155 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F R   K Y++ ED   R   F TN+ +A  +QR D  +AV  V +F DL+ ++ +
Sbjct: 49  HFRLFKRRFGKSYATQEDHDYRFSVFKTNLRRARHHQRLDP-SAVHGVTQFSDLTPAEFR 107

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +   L L          L+ P  +N+            +   +DLP  FDWR  G ++ V
Sbjct: 108 R-NHLGLKR--------LRFPADANKA----------PILPTEDLPADFDWRDHGAVASV 148

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CW+FS  G +E  + +    L  LS Q
Sbjct: 149 KNQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQ 183


>gi|255522980|gb|ACU12382.1| RE21773p [Drosophila melanogaster]
          Length = 375

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 136/261 (52%), Gaps = 43/261 (16%)

Query: 237 FGVNKFFDLSESDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD 295
             VNK+ DL   + +QL  G N       +   L+A       D   +   F S  H   
Sbjct: 110 LAVNKYADLLHHEFRQLMNGFNYT-----LHKQLRA------ADESFKGVTFISPAHVT- 157

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR +G ++ VK+QG C  CWAFS+ G +E  H  +   L  LS Q LVDC    
Sbjct: 158 LPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKY 217

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYS 409
            N GCNGG MD+A +YI DNGG+ ++++YPY+A +      +G +   + GF       +
Sbjct: 218 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGF-------T 270

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV-----IDLNQRLYGTSI----- 457
            IP G+E++M + VAT GP+SV ++A+     +YS GV      D     +G  +     
Sbjct: 271 DIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGT 330

Query: 458 -----PYWIVKNSWGSDWGEK 473
                 YW+VKNSWG+ WG+K
Sbjct: 331 DESGEDYWLVKNSWGTTWGDK 351



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 104/170 (61%), Gaps = 25/170 (14%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +GVL S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +  
Sbjct: 199 SGVLVS----LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDS 254

Query: 549 ----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGG 602
               +G +   + GF       + IP G+E++M + VAT GP+SV ++A+     +YS G
Sbjct: 255 CHFNKGTVGATDRGF-------TDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEG 307

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           V   N+  C+ +  +H +++VG+G +E  +     YW+VKNSWG+ WG+K
Sbjct: 308 V--YNEPQCDAQNLDHGVLVVGFGTDESGE----DYWLVKNSWGTTWGDK 351



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 71/155 (45%), Gaps = 16/155 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSDLQQ 104
           F  +H K Y    +   R + F  N  K A+  QR   G   F+  VNK+ DL   + +Q
Sbjct: 66  FKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 125

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           L  G N       +   L+A       D   +   F S  H   LP++ DWR +G ++ V
Sbjct: 126 LMNGFNYT-----LHKQLRA------ADESFKGVTFISPAHVT-LPKSVDWRTKGAVTAV 173

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS+ G +E  H  +   L  LS Q
Sbjct: 174 KDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQ 208


>gi|343473370|emb|CCD14732.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 154/318 (48%), Gaps = 35/318 (11%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVNVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  PEA DWR +G ++ VK+QG C  CWAFSA+G +E    + G+ LT LS Q LV
Sbjct: 124 ----GKAPEAVDWRKKGAVTPVKDQGACGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD ++ GC GG MD +LQ+I+  + G V + Q+YPY +   +        +    K+  
Sbjct: 180 SCDTTDYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPCNKSGKVVGAKISG 239

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----T 455
           +  +P  +E  + +W+A  GP+++ ++A     Y GGV        +D +  L G    +
Sbjct: 240 HINLPK-DENAIAEWLAKNGPVAIAVDATSFLGYKGGVLTSCISKGLDHDVLLVGYNDTS 298

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSW   WGE+
Sbjct: 299 KPPYWIIKNSWSKGWGEE 316



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVG 554
           +L+ L+ + LV CD ++ GC GG MD +LQ+I+  + G V + Q+YPY +   +      
Sbjct: 169 ELTSLSEQMLVSCDTTDYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPCNK 228

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
             +    K+  +  +P  +E  + +W+A  GP+++ ++A     Y GGV+      C  K
Sbjct: 229 SGKVVGAKISGHINLPK-DENAIAEWLAKNGPVAIAVDATSFLGYKGGVLT----SCISK 283

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H +++VGY +  K      PYWI+KNSW   WGE+
Sbjct: 284 GLDHDVLLVGYNDTSKP-----PYWIIKNSWSKGWGEE 316



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                PEA DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVNVST-------------GKAPEAVDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFSA+G +E    + G+ LT LS Q
Sbjct: 142 KDQGACGSCWAFSAIGNIEGQWKVAGHELTSLSEQ 176


>gi|242070333|ref|XP_002450443.1| hypothetical protein SORBIDRAFT_05g005530 [Sorghum bicolor]
 gi|241936286|gb|EES09431.1| hypothetical protein SORBIDRAFT_05g005530 [Sorghum bicolor]
          Length = 351

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 44/305 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV-FGVNKFFDLSESD-LQQLTGLN 257
           H + Y    +  RR + F  N    +   +   G      +N+F D++  + + + TG  
Sbjct: 59  HGRTYKDEAEKARRFQVFKANAAFVDTSNAAAGGKKYHLAINRFADMTHDEFMARYTGFK 118

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
                         P  +  T  +M  F++ ++    +  +A DWR +G ++ VK Q KC
Sbjct: 119 --------------PLPA--TGKKMPGFKYANVTLSSEDQQAVDWRKKGAVTDVKNQQKC 162

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNGG 375
            CCWAFSAV  +E MH I    L  LS QQLVDC    +N GC GG M+DA QY+I N G
Sbjct: 163 GCCWAFSAVAAIEGMHQINTGELVSLSEQQLVDCSTNGNNNGCGGGTMEDAFQYVIGNNG 222

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++ AYPY A +      + +     V V+ Y ++P  +E+ +   VA + P+SV ++A
Sbjct: 223 IATEAAYPYTAMQG-----MCQNVQPAVAVRSYQQVPRDDEDALAAAVAGQ-PVSVAVDA 276

Query: 436 NGLFYYSGGVI-------DLNQRL----YGTS---IPYWIVKNSWGSDWGE----KVEDK 477
           N   +Y GGV+       +LN  +    YGT+    PYW++KN WGS WGE    +++  
Sbjct: 277 NNFQFYKGGVMTADSCGTNLNHAVTAVGYGTAEDGTPYWLLKNQWGSTWGEEGYLRLQRG 336

Query: 478 VGSSG 482
           VG+ G
Sbjct: 337 VGACG 341



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 90/161 (55%), Gaps = 15/161 (9%)

Query: 497 KLSRLATEKLVDCDMSNGGCNG--GRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           +L  L+ ++LVDC  +        G M+DA QY+I N G+ ++ AYPY A +      + 
Sbjct: 184 ELVSLSEQQLVDCSTNGNNNGCGGGTMEDAFQYVIGNNGIATEAAYPYTAMQG-----MC 238

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           +     V V+ Y ++P  +E+ +   VA + P+SV ++AN   +Y GGV+  +    N  
Sbjct: 239 QNVQPAVAVRSYQQVPRDDEDALAAAVAGQ-PVSVAVDANNFQFYKGGVMTADSCGTN-- 295

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
             NHA+  VGYG  E  DGT  PYW++KN WGS WGE+  L
Sbjct: 296 -LNHAVTAVGYGTAE--DGT--PYWLLKNQWGSTWGEEGYL 331



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 19/181 (10%)

Query: 22  IKVALLESNIFQTRGYLNSPVT-RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQ 80
           I  A+   ++  + GY    +T R   +M +H + Y    +  RR + F  N    +   
Sbjct: 28  IGCAVAARDLSSSTGYGEEAMTARHEKWMVEHGRTYKDEAEKARRFQVFKANAAFVDTSN 87

Query: 81  REDSGTAV-FEVNKFFDLS-DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
               G      +N+F D++ D  + + TG                P  +  T  +M  F+
Sbjct: 88  AAAGGKKYHLAINRFADMTHDEFMARYTGFK--------------PLPA--TGKKMPGFK 131

Query: 139 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           + ++    +  +A DWR +G ++ VK Q KC CCWAFSAV  +E MH I    L  LS Q
Sbjct: 132 YANVTLSSEDQQAVDWRKKGAVTDVKNQQKCGCCWAFSAVAAIEGMHQINTGELVSLSEQ 191

Query: 199 H 199
            
Sbjct: 192 Q 192


>gi|74178074|dbj|BAE29827.1| unnamed protein product [Mus musculus]
 gi|74178231|dbj|BAE29900.1| unnamed protein product [Mus musculus]
 gi|74220784|dbj|BAE31361.1| unnamed protein product [Mus musculus]
          Length = 326

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 130/225 (57%), Gaps = 29/225 (12%)

Query: 268 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 327
           +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG C  CWAFSAVG
Sbjct: 88  ALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQGSCGACWAFSAVG 140

Query: 328 VVEAMHAIQGNSLTELSVQQLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYP 383
            +E    ++   L  LS Q LVDC       N GC GG M +A QYIIDNGG+ +D +YP
Sbjct: 141 ALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYP 200

Query: 384 YKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYY 441
           YKA++ +  C    +         Y ++P+G+E+ +K+ VAT+GP+SVG++A  +  F+Y
Sbjct: 201 YKATDEK--CHYNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFY 257

Query: 442 SGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
             GV D       +N  +    YGT     YW+VKNSWG ++G++
Sbjct: 258 KSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQ 302



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 99/165 (60%), Gaps = 23/165 (13%)

Query: 497 KLSRLATEKLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           KL  L+ + LVDC       N GC GG M +A QYIIDNGG+ +D +YPYKA++ +  C 
Sbjct: 152 KLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEK--CH 209

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRL 610
              +         Y ++P+G+E+ +K+ VAT+GP+SVG++A  +  F+Y  GV D     
Sbjct: 210 YNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD----- 263

Query: 611 CNPKAQ---NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +P      NH +++VGYG  + KD     YW+VKNSWG ++G++
Sbjct: 264 -DPSCTGNVNHGVLVVGYGTLDGKD-----YWLVKNSWGLNFGDQ 302



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 120 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 179
           +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG C  CWAFSAVG
Sbjct: 88  ALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQGSCGACWAFSAVG 140

Query: 180 VVEAMHAIQGNNLTELSVQH 199
            +E    ++   L  LS Q+
Sbjct: 141 ALEGQLKLKTGKLISLSAQN 160


>gi|194352752|emb|CAQ00104.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 351

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/300 (35%), Positives = 157/300 (52%), Gaps = 38/300 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K Y+S E+ L R E F  N++  ++   E + +   G+N+F DL+  + +
Sbjct: 43  LFEKWLAKHQKAYASFEEKLHRFEVFKDNLKLIDEINREVT-SYWLGLNEFADLTHDEFK 101

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
             T L L                     +  R+F++ ++    DLP+A DWR +G ++ V
Sbjct: 102 T-TYLGLSPP--------------PARRSSSRSFRYENVA-AHDLPKAVDWRKKGAVTDV 145

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYI 370
           K QG+C  CWAFS V  VE ++AI   +LT LS Q+L+DC +  N GCNGG MD A  YI
Sbjct: 146 KNQGQCGSCWAFSTVAAVEGINAIVTGNLTALSEQELIDCSVDGNSGCNGGMMDYAFSYI 205

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEE-EGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
             +GG+ +++AYPY   E    C  G++ E   V +  Y  +P  +E+ + K +A + P+
Sbjct: 206 ASSGGLHTEEAYPYLMEEGS--CGDGKKSESEAVSISGYEDVPTKDEQALIKALAHQ-PV 262

Query: 430 SVGMNANG--LFYYSGGVID------LNQRLY--------GTSIPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV D      L+  +         G    Y IVKNSWG  WGEK
Sbjct: 263 SVAIEASGRHFQFYSGGVFDGPCGAQLDHGVAAVGYGSDKGKGHDYIIVKNSWGGKWGEK 322



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 14/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DC +  N GCNGG MD A  YI  +GG+ +++AYPY   E  
Sbjct: 166 INAIVTGNLTALSEQELIDCSVDGNSGCNGGMMDYAFSYIASSGGLHTEEAYPYLMEEGS 225

Query: 549 RGCLVGEE-EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
             C  G++ E   V +  Y  +P  +E+ + K +A + P+SV + A+G    +YSGGV D
Sbjct: 226 --CGDGKKSESEAVSISGYEDVPTKDEQALIKALAHQ-PVSVAIEASGRHFQFYSGGVFD 282

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H +  VGYG ++   G    Y IVKNSWG  WGEK
Sbjct: 283 ---GPCGAQL-DHGVAAVGYGSDK---GKGHDYIIVKNSWGGKWGEK 322



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 17/157 (10%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V  F  ++  H K Y+S E+ L R E F  N++  ++  RE + +    +N+F DL    
Sbjct: 41  VELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKLIDEINREVT-SYWLGLNEFADL---- 95

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                      T ++ + +           +  R+F++ ++    DLP+A DWR +G ++
Sbjct: 96  -----------THDEFKTTYLGLSPPPARRSSSRSFRYENVA-AHDLPKAVDWRKKGAVT 143

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK QG+C  CWAFS V  VE ++AI   NLT LS Q
Sbjct: 144 DVKNQGQCGSCWAFSTVAAVEGINAIVTGNLTALSEQ 180


>gi|24653514|ref|NP_523735.2| cysteine proteinase-1, isoform C [Drosophila melanogaster]
 gi|118572624|sp|Q95029.2|CATL_DROME RecName: Full=Cathepsin L; AltName: Full=Cysteine proteinase 1;
           Contains: RecName: Full=Cathepsin L heavy chain;
           Contains: RecName: Full=Cathepsin L light chain; Flags:
           Precursor
 gi|21627209|gb|AAM68565.1| cysteine proteinase-1, isoform C [Drosophila melanogaster]
          Length = 371

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 136/261 (52%), Gaps = 43/261 (16%)

Query: 237 FGVNKFFDLSESDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD 295
             VNK+ DL   + +QL  G N       +   L+A       D   +   F S  H   
Sbjct: 106 LAVNKYADLLHHEFRQLMNGFNYT-----LHKQLRA------ADESFKGVTFISPAHVT- 153

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR +G ++ VK+QG C  CWAFS+ G +E  H  +   L  LS Q LVDC    
Sbjct: 154 LPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKY 213

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYS 409
            N GCNGG MD+A +YI DNGG+ ++++YPY+A +      +G +   + GF       +
Sbjct: 214 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGF-------T 266

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV-----IDLNQRLYGTSI----- 457
            IP G+E++M + VAT GP+SV ++A+     +YS GV      D     +G  +     
Sbjct: 267 DIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGT 326

Query: 458 -----PYWIVKNSWGSDWGEK 473
                 YW+VKNSWG+ WG+K
Sbjct: 327 DESGEDYWLVKNSWGTTWGDK 347



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 104/170 (61%), Gaps = 25/170 (14%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +GVL S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +  
Sbjct: 195 SGVLVS----LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDS 250

Query: 549 ----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGG 602
               +G +   + GF       + IP G+E++M + VAT GP+SV ++A+     +YS G
Sbjct: 251 CHFNKGTVGATDRGF-------TDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEG 303

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           V   N+  C+ +  +H +++VG+G +E  +     YW+VKNSWG+ WG+K
Sbjct: 304 V--YNEPQCDAQNLDHGVLVVGFGTDESGE----DYWLVKNSWGTTWGDK 347



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 71/155 (45%), Gaps = 16/155 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSDLQQ 104
           F  +H K Y    +   R + F  N  K A+  QR   G   F+  VNK+ DL   + +Q
Sbjct: 62  FKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 121

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           L  G N       +   L+A       D   +   F S  H   LP++ DWR +G ++ V
Sbjct: 122 LMNGFNYT-----LHKQLRA------ADESFKGVTFISPAHVT-LPKSVDWRTKGAVTAV 169

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS+ G +E  H  +   L  LS Q
Sbjct: 170 KDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQ 204


>gi|290984408|ref|XP_002674919.1| predicted protein [Naegleria gruberi]
 gi|284088512|gb|EFC42175.1| predicted protein [Naegleria gruberi]
          Length = 353

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 160/335 (47%), Gaps = 58/335 (17%)

Query: 192 LTELSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFF 243
           L+E +V+ H         + Y   E+   R + F  N+E +      + G   +G+ KF 
Sbjct: 28  LSETAVRDHFLDFTRKFQRFYKGPEEYEYRLKVFRENIETSRRMNIRE-GNNNYGITKFS 86

Query: 244 DLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 303
           DL+  + ++   L    T ++IQ  ++           M + +  S  +    P+ +DWR
Sbjct: 87  DLTSDEFRKFY-LMEKKTPKEIQKMMR-----------MDSNKMVSNSYAKPAPDHYDWR 134

Query: 304 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--------- 354
             G I+ VK+QG+C  CWAFSA+G +E  +AI+   L   S QQLVDCD +         
Sbjct: 135 NHGAITGVKDQGQCGSCWAFSAIGSIEGSYAIKHKQLVSFSEQQLVDCDNNCVTFENQQS 194

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY 413
            + GCNGG    A QY++  GGVV+++ YPY A   +  C V +   F  K+  ++ +  
Sbjct: 195 CDDGCNGGLQWSAYQYLMKAGGVVTEKDYPYYAERYK--CEV-KPANFVAKLSNWTMLS- 250

Query: 414 GEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID-------------------LNQRLYG 454
             E EM  W+A  GP++V +NA+ L  Y+ G+ D                   L    +G
Sbjct: 251 TNETEMANWLAENGPIAVALNADFLQNYNNGIADPAWCDPTQLDHGVLIVGYGLETFWFG 310

Query: 455 TSIPYWIVKNSWGSDWGE----KVEDKVGSSGNRT 485
              PYWIVKNSWG D+GE    ++   VG  G  T
Sbjct: 311 KPQPYWIVKNSWGYDFGEDGYFRIVKGVGRCGINT 345



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 16/165 (9%)

Query: 497 KLSRLATEKLVDCDMS----------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASE 546
           +L   + ++LVDCD +          + GCNGG    A QY++  GGVV+++ YPY A  
Sbjct: 170 QLVSFSEQQLVDCDNNCVTFENQQSCDDGCNGGLQWSAYQYLMKAGGVVTEKDYPYYAER 229

Query: 547 SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDL 606
            +  C V +   F  K+  ++ +    E EM  W+A  GP++V +NA+ L  Y+ G+ D 
Sbjct: 230 YK--CEV-KPANFVAKLSNWTMLS-TNETEMANWLAENGPIAVALNADFLQNYNNGIAD- 284

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C+P   +H ++IVGYG E    G   PYWIVKNSWG D+GE
Sbjct: 285 -PAWCDPTQLDHGVLIVGYGLETFWFGKPQPYWIVKNSWGYDFGE 328



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 13/156 (8%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            FL+F R   + Y   E+   R + F  N+E +      + G   + + KF DL+  + +
Sbjct: 36  HFLDFTRKFQRFYKGPEEYEYRLKVFRENIETSRRMNIRE-GNNNYGITKFSDLTSDEFR 94

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +   L    T ++IQ  ++           M + +  S  +    P+ +DWR  G I+ V
Sbjct: 95  KFY-LMEKKTPKEIQKMMR-----------MDSNKMVSNSYAKPAPDHYDWRNHGAITGV 142

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG+C  CWAFSA+G +E  +AI+   L   S Q 
Sbjct: 143 KDQGQCGSCWAFSAIGSIEGSYAIKHKQLVSFSEQQ 178


>gi|255538210|ref|XP_002510170.1| cysteine protease, putative [Ricinus communis]
 gi|223550871|gb|EEF52357.1| cysteine protease, putative [Ricinus communis]
          Length = 469

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 143/279 (51%), Gaps = 40/279 (14%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR + F  N+   +++ SE+    V G+N+F DL               T E+ +     
Sbjct: 73  RRFQVFKDNLRFIDEHNSENRSYKV-GLNRFADL---------------TNEEYRSMYLG 116

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
             S  + +   R+      R GD LP++ DWR EG +++VK+QG C  CWAFS +  VE 
Sbjct: 117 ARSGAKRNRLSRSSNRYLPRVGDSLPDSVDWRKEGAVAEVKDQGSCGSCWAFSTIAAVEG 176

Query: 332 MHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 390
           ++ I    L  LS Q+LVDCD S N GCNGG MD A Q+II+NGG+ S++ YPY A +  
Sbjct: 177 INKIVTGDLISLSEQELVDCDRSYNEGCNGGLMDYAFQFIINNGGIDSEEDYPYLARDGT 236

Query: 391 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSG---- 443
             C    +    V +  Y  +P  +E+ ++K VA + P+SV + A G    FY SG    
Sbjct: 237 --CDTYRKNAKVVTIDNYEDVPVNDEKALQKAVANQ-PVSVAIEAGGREFQFYQSGIFTG 293

Query: 444 --------GVIDLNQRLYGT--SIPYWIVKNSWGSDWGE 472
                   GV  +    YGT     YWIV+NSWG  WGE
Sbjct: 294 RCGTALDHGVAAVG---YGTENGKDYWIVRNSWGKSWGE 329



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 92/166 (55%), Gaps = 17/166 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A Q+II+NGG+ S++ YPY A +  
Sbjct: 177 INKIVTGDLISLSEQELVDCDRSYNEGCNGGLMDYAFQFIINNGGIDSEEDYPYLARDGT 236

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVID 605
             C    +    V +  Y  +P  +E+ ++K VA + P+SV + A G    FY SG    
Sbjct: 237 --CDTYRKNAKVVTIDNYEDVPVNDEKALQKAVANQ-PVSVAIEAGGREFQFYQSG---- 289

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +    C   A +H +  VGYG E  KD     YWIV+NSWG  WGE
Sbjct: 290 IFTGRCG-TALDHGVAAVGYGTENGKD-----YWIVRNSWGKSWGE 329



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 15/157 (9%)

Query: 50  RDHDKVYSSVEDLL----RRHENFVTNVEKAEDYQREDSGTAVFEVN-KFFDLSDSDLQQ 104
           R  D+V +  E+ L    + H N     EK   +Q       VF+ N +F D  +S+ + 
Sbjct: 42  RTDDEVMAIYEEWLVKNGKAHSNNNALGEKERRFQ-------VFKDNLRFIDEHNSENRS 94

Query: 105 L-TGLN--LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
              GLN   D T E+ +       S  + +   R+      R GD LP++ DWR EG ++
Sbjct: 95  YKVGLNRFADLTNEEYRSMYLGARSGAKRNRLSRSSNRYLPRVGDSLPDSVDWRKEGAVA 154

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +VK+QG C  CWAFS +  VE ++ I   +L  LS Q
Sbjct: 155 EVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLSEQ 191


>gi|359492179|ref|XP_002280808.2| PREDICTED: cysteine proteinase RD19a-like [Vitis vinifera]
 gi|302142580|emb|CBI19783.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 154/315 (48%), Gaps = 61/315 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           LS +HH         K Y++ E+   R   F  N+ +A+  Q  D  +AV GV +F DL+
Sbjct: 46  LSAEHHFAAFKARFRKTYATAEEHDYRFSIFKANLRRAKRNQLLDP-SAVHGVTRFSDLT 104

Query: 247 ESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 306
            ++ +Q            ++P L+ P  + Q            +   +DLP  FDWR  G
Sbjct: 105 PAEFRQ--------NYLGLKP-LRFPIDTQQA----------PILPTNDLPTDFDWRDHG 145

Query: 307 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNGG 357
            ++ VK+QG+C  CW+FS  G +E  H +   +L  LS QQLVDCD           + G
Sbjct: 146 AVTAVKDQGECGSCWSFSTTGALEGAHFLATGNLVSLSEQQLVDCDHECDPEEYGACDRG 205

Query: 358 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 417
           CNGG M+ A +YI+  GGVV  + YPY  ++   G    ++      V  +S +   +E+
Sbjct: 206 CNGGLMNTAFEYILKAGGVVRGEDYPYTGTD---GHCKFDKTKIAASVSNFSTVSI-DED 261

Query: 418 EMKKWVATRGPLSVGMNANGLFYYSGGV-------IDLNQRL----YGTS---------I 457
           ++   +   GPL+VG+NA  +  Y+GGV         LN  +    YG++          
Sbjct: 262 QIAANLVKNGPLAVGINAIFMQSYAGGVSCPFICSTSLNHGVLLVGYGSAGYSPIRFKEK 321

Query: 458 PYWIVKNSWGSDWGE 472
           PYW++KNSWG +WGE
Sbjct: 322 PYWLLKNSWGQNWGE 336



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 30/171 (17%)

Query: 498 LSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           L  L+ ++LVDCD           + GCNGG M+ A +YI+  GGVV  + YPY  ++  
Sbjct: 179 LVSLSEQQLVDCDHECDPEEYGACDRGCNGGLMNTAFEYILKAGGVVRGEDYPYTGTD-- 236

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
            G    ++      V  +S +   +E+++   +   GPL+VG+NA  +  Y+GGV     
Sbjct: 237 -GHCKFDKTKIAASVSNFSTVSI-DEDQIAANLVKNGPLAVGINAIFMQSYAGGVS--CP 292

Query: 609 RLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
            +C+  + NH +++VGYG         +EK      PYW++KNSWG +WGE
Sbjct: 293 FICS-TSLNHGVLLVGYGSAGYSPIRFKEK------PYWLLKNSWGQNWGE 336



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 20/173 (11%)

Query: 26  LLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSG 85
           LL   +      L S    F  F     K Y++ E+   R   F  N+ +A+  Q  D  
Sbjct: 33  LLIRQVVSNSDDLLSAEHHFAAFKARFRKTYATAEEHDYRFSIFKANLRRAKRNQLLDP- 91

Query: 86  TAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG 145
           +AV  V +F DL+ ++ +Q            ++P L+ P  + Q            +   
Sbjct: 92  SAVHGVTRFSDLTPAEFRQ--------NYLGLKP-LRFPIDTQQA----------PILPT 132

Query: 146 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +DLP  FDWR  G ++ VK+QG+C  CW+FS  G +E  H +   NL  LS Q
Sbjct: 133 NDLPTDFDWRDHGAVTAVKDQGECGSCWSFSTTGALEGAHFLATGNLVSLSEQ 185


>gi|330805273|ref|XP_003290609.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
 gi|325079248|gb|EGC32857.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
          Length = 333

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 158/295 (53%), Gaps = 43/295 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTG 255
           ++ HD+ YS  E+   R++ F  N++    + S++S T V G+ KF DL+  + ++   G
Sbjct: 37  MRKHDRAYSH-EEFTDRYQAFKENMDFIHKWNSQESDT-VLGLTKFADLTNEEYKKHYLG 94

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           + ++     ++ +L      N     ++ F+F         P++ DWR +G +S+VK+QG
Sbjct: 95  IKVN-----VKKNL------NAAQKGLKFFKFTG-------PDSIDWREKGAVSQVKDQG 136

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDN 373
           +C  CW+FS  G VE  H I+  ++  LS Q LVDC     N GC GG M +A +YIIDN
Sbjct: 137 QCGSCWSFSTTGAVEGAHQIKSGNMVSLSEQNLVDCSGQYGNQGCEGGLMVNAFEYIIDN 196

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++ +YPY A++  R        G    +  Y  IP GEE+ +   +A + P+SV +
Sbjct: 197 GGIATESSYPYTAAQG-RCKFTKSMNG--ANIIGYKEIPQGEEDSLTAALAKQ-PVSVAI 252

Query: 434 NANGLFY--YSGGVID--------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           +A+ + +  YS GV D        L+  +    YGT     Y+I+KNSWG  WG+
Sbjct: 253 DASHMSFQLYSSGVYDEPACSSEALDHGVLAVGYGTLEGKDYYIIKNSWGPTWGQ 307



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 15/158 (9%)

Query: 498 LSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           +  L+ + LVDC     N GC GG M +A +YIIDNGG+ ++ +YPY A++  R      
Sbjct: 161 MVSLSEQNLVDCSGQYGNQGCEGGLMVNAFEYIIDNGGIATESSYPYTAAQG-RCKFTKS 219

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNP 613
             G    +  Y  IP GEE+ +   +A + P+SV ++A+ + +  YS GV D  +  C+ 
Sbjct: 220 MNG--ANIIGYKEIPQGEEDSLTAALAKQ-PVSVAIDASHMSFQLYSSGVYD--EPACSS 274

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +A +H ++ VGYG  E KD     Y+I+KNSWG  WG+
Sbjct: 275 EALDHGVLAVGYGTLEGKD-----YYIIKNSWGPTWGQ 307



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 92/172 (53%), Gaps = 25/172 (14%)

Query: 29  SNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAV 88
           +N+F ++ Y     T F+ +MR HD+ YS  E+   R++ F  N++    +  ++S T V
Sbjct: 21  ANVFSSQTYQ----TSFIGWMRKHDRAYSH-EEFTDRYQAFKENMDFIHKWNSQESDT-V 74

Query: 89  FEVNKFFDLSDSDLQQ-LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD 147
             + KF DL++ + ++   G+ ++     ++ +L      N     ++ F+F        
Sbjct: 75  LGLTKFADLTNEEYKKHYLGIKVN-----VKKNL------NAAQKGLKFFKFTG------ 117

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            P++ DWR +G +S+VK+QG+C  CW+FS  G VE  H I+  N+  LS Q+
Sbjct: 118 -PDSIDWREKGAVSQVKDQGQCGSCWSFSTTGAVEGAHQIKSGNMVSLSEQN 168


>gi|242055323|ref|XP_002456807.1| hypothetical protein SORBIDRAFT_03g043220 [Sorghum bicolor]
 gi|241928782|gb|EES01927.1| hypothetical protein SORBIDRAFT_03g043220 [Sorghum bicolor]
          Length = 369

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 142/277 (51%), Gaps = 31/277 (11%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR   F  NV     +           +N+F D+   + +       DS + D++ + ++
Sbjct: 60  RRFGTFKENVRFIHAHNKRGDRPYRLSLNRFGDMGREEFRSTFA---DSRINDLRRA-ES 115

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
           P +       +  F ++ +    DLP + DWR EG ++ VK+QG C  CWAFS V  VE 
Sbjct: 116 PAAP-----AVPGFMYDGV---TDLPPSVDWRKEGAVTAVKDQGHCGSCWAFSTVVSVEG 167

Query: 332 MHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 391
           ++AI+  SL  LS Q+L+DCD    GC GG M++A ++I   GGV ++ AYPY+AS    
Sbjct: 168 INAIRTGSLVSLSEQELIDCDTDENGCQGGLMENAFEFIKSYGGVTTESAYPYRASNGT- 226

Query: 392 GC-LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI-- 446
            C  V    G  V +  +  +P G E+ + K VA + P+SV ++A G    +YS GV   
Sbjct: 227 -CDSVRSRRGQIVSIDGHQMVPTGSEDALAKAVANQ-PVSVAIDAGGQAFQFYSEGVFTG 284

Query: 447 ----DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
               DL+  +    YG S     YWIVKNSWG  WGE
Sbjct: 285 DCGTDLDHGVAAVGYGVSDDGTAYWIVKNSWGPSWGE 321



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  +    L  L+ ++L+DCD    GC GG M++A ++I   GGV ++ AYPY+AS    
Sbjct: 168 INAIRTGSLVSLSEQELIDCDTDENGCQGGLMENAFEFIKSYGGVTTESAYPYRASNGT- 226

Query: 550 GC-LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI-- 604
            C  V    G  V +  +  +P G E+ + K VA + P+SV ++A G    +YS GV   
Sbjct: 227 -CDSVRSRRGQIVSIDGHQMVPTGSEDALAKAVANQ-PVSVAIDAGGQAFQFYSEGVFTG 284

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           D    L      +H +  VGYG  +  DGT+  YWIVKNSWG  WGE
Sbjct: 285 DCGTDL------DHGVAAVGYGVSD--DGTA--YWIVKNSWGPSWGE 321



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 12/135 (8%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           RR   F  NV     + +         +N+F D+   + +       DS + D++ + ++
Sbjct: 60  RRFGTFKENVRFIHAHNKRGDRPYRLSLNRFGDMGREEFRSTFA---DSRINDLRRA-ES 115

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
           P +       +  F ++ +    DLP + DWR EG ++ VK+QG C  CWAFS V  VE 
Sbjct: 116 PAAP-----AVPGFMYDGV---TDLPPSVDWRKEGAVTAVKDQGHCGSCWAFSTVVSVEG 167

Query: 184 MHAIQGNNLTELSVQ 198
           ++AI+  +L  LS Q
Sbjct: 168 INAIRTGSLVSLSEQ 182


>gi|268581031|ref|XP_002645498.1| Hypothetical protein CBG22748 [Caenorhabditis briggsae]
          Length = 379

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 152/291 (52%), Gaps = 43/291 (14%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDS 260
           +++YSS E+   R+  FV NV + E+ + +  G   F +N+F D SE +L+++       
Sbjct: 86  NRLYSSQEEYKYRYHIFVHNVREFEEEERKHPGLD-FDINEFTDWSEEELRKMI------ 138

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQF--NSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                               E  A +F  + L  G   P + DWR +G ++ +K QG+C 
Sbjct: 139 ------------VDKKNVKEEKNAVRFEGSVLSSGIKRPASIDWRDQGKLTPIKNQGQCG 186

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
            CWAF+ V  +EA HAI+   L  LS Q++VDCD  N GC+GG    A++++ +N G+ +
Sbjct: 187 SCWAFATVAAIEAQHAIKKGILVSLSEQEMVDCDGRNNGCSGGYRPYAMRFVKEN-GLET 245

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN-ANG 437
           +++YPY A + ++ C++ + +  KV + +Y R+    EE +  WV T+GP++ GMN    
Sbjct: 246 EKSYPYSALKHDQ-CMLHQNDT-KVYIDDY-RMLSTSEENIADWVGTKGPVTFGMNVVKA 302

Query: 438 LFYYSGGVI-----DLNQRLYGT------------SIPYWIVKNSWGSDWG 471
           ++ Y  G+      D  ++  G             +  YWIVKNSWG+ WG
Sbjct: 303 MYSYRSGIFNPSAEDCAEKSMGAHALTIVGYGGEGTSAYWIVKNSWGTSWG 353



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 96/155 (61%), Gaps = 11/155 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ +++VDCD  N GC+GG    A++++ +N G+ ++++YPY A + ++ C++ + +
Sbjct: 208 LVSLSEQEMVDCDGRNNGCSGGYRPYAMRFVKEN-GLETEKSYPYSALKHDQ-CMLHQND 265

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN-ANGLFYYSGGVIDLNQRLCNPKAQ 616
             KV + +Y R+    EE +  WV T+GP++ GMN    ++ Y  G+ + +   C  K+ 
Sbjct: 266 T-KVYIDDY-RMLSTSEENIADWVGTKGPVTFGMNVVKAMYSYRSGIFNPSAEDCAEKSM 323

Query: 617 N-HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
             HAL IVGYG E    GTS  YWIVKNSWG+ WG
Sbjct: 324 GAHALTIVGYGGE----GTS-AYWIVKNSWGTSWG 353



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 26/188 (13%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSPVTR----FLNFMRDHDKVYSSVEDLLRRHENFVTN 72
           L  F+I V L  S   +  G   +   R    F  F+   +++YSS E+   R+  FV N
Sbjct: 47  LAVFLIFV-LFSSCALREMGKRKTATQRYEVLFDEFLYKFNRLYSSQEEYKYRYHIFVHN 105

Query: 73  VEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDT 132
           V + E+ +R+  G   F++N+F D S+ +L+++                           
Sbjct: 106 VREFEEEERKHPGLD-FDINEFTDWSEEELRKMI------------------VDKKNVKE 146

Query: 133 EMRAFQF--NSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGN 190
           E  A +F  + L  G   P + DWR +G ++ +K QG+C  CWAF+ V  +EA HAI+  
Sbjct: 147 EKNAVRFEGSVLSSGIKRPASIDWRDQGKLTPIKNQGQCGSCWAFATVAAIEAQHAIKKG 206

Query: 191 NLTELSVQ 198
            L  LS Q
Sbjct: 207 ILVSLSEQ 214


>gi|356543038|ref|XP_003539970.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 145/294 (49%), Gaps = 37/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + KVY   E+  +R + F  NV   E + +  +     G+N+F DL+  +       
Sbjct: 43  MARYAKVYKDPEEREKRFKIFKENVNYIEAFNNAANKPYKLGINQFADLTNEEF------ 96

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                   I P  +       + T    F++ ++     LP   DWR +G ++ +K+QG+
Sbjct: 97  --------IAPRNRFKGHMCSSITRTTTFKYENV---TALPSTVDWRQKGAVTPIKDQGQ 145

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV   E +HA+    L  LS Q++VDCD    + GC GG MD A ++II N 
Sbjct: 146 CGCCWAFSAVAATEGIHALNSGKLISLSEQEVVDCDTKGEDQGCAGGFMDGAFKFIIQNH 205

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPYKA + +  C   E       +  Y  +P   E+ ++K VA + P+SV ++
Sbjct: 206 GLNTEANYPYKAVDGK--CNANEAANHAATITGYEDVPVNNEKALQKAVANQ-PVSVAID 262

Query: 435 ANG---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           A+G    FY +G            GV  +   +      YW+VKNSWG++WGE+
Sbjct: 263 ASGSDFQFYKTGVFTGSCGTQLDHGVTAVGYGVSADGTQYWLVKNSWGTEWGEE 316



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ +++VDCD    + GC GG MD A ++II N G+ ++  YPYKA + +  C   
Sbjct: 168 KLISLSEQEVVDCDTKGEDQGCAGGFMDGAFKFIIQNHGLNTEANYPYKAVDGK--CNAN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           E       +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 226 EAANHAATITGYEDVPVNNEKALQKAVANQ-PVSVAIDASGSDFQFYKTGVFTGS---CG 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG++WGE+
Sbjct: 282 TQL-DHGVTAVGYGVS--ADGTQ--YWLVKNSWGTEWGEE 316



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   E+  +R + F  NV   E +    +      +N+F DL++ +  
Sbjct: 38  RHEEWMARYAKVYKDPEEREKRFKIFKENVNYIEAFNNAANKPYKLGINQFADLTNEEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +       + T    F++ ++     LP   DWR +G ++ +
Sbjct: 97  -------------IAPRNRFKGHMCSSITRTTTFKYENV---TALPSTVDWRQKGAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +HA+    L  LS Q
Sbjct: 141 KDQGQCGCCWAFSAVAATEGIHALNSGKLISLSEQ 175


>gi|195583187|ref|XP_002081405.1| GD10995 [Drosophila simulans]
 gi|194193414|gb|EDX06990.1| GD10995 [Drosophila simulans]
          Length = 341

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 136/261 (52%), Gaps = 43/261 (16%)

Query: 237 FGVNKFFDLSESDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD 295
             VNK+ DL   + +QL  G N       +   L+A       D   +   F S  H   
Sbjct: 76  LAVNKYADLLHHEFRQLMNGFNYT-----LHKQLRA------ADESFKGVTFISPAHVT- 123

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR +G ++ VK+QG C  CWAFS+ G +E  H  +   L  LS Q LVDC    
Sbjct: 124 LPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKY 183

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYS 409
            N GCNGG MD+A +YI DNGG+ ++++YPY+A +      +G +   + GF       +
Sbjct: 184 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTIGATDRGF-------T 236

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV-----IDLNQRLYGTSI----- 457
            IP G+E++M + VAT GP+SV ++A+     +YS GV      D     +G  +     
Sbjct: 237 DIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGT 296

Query: 458 -----PYWIVKNSWGSDWGEK 473
                 YW+VKNSWG+ WG+K
Sbjct: 297 DESGDDYWLVKNSWGTTWGDK 317



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 104/170 (61%), Gaps = 25/170 (14%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +GVL S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +  
Sbjct: 165 SGVLVS----LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDS 220

Query: 549 ----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGG 602
               +G +   + GF       + IP G+E++M + VAT GP+SV ++A+     +YS G
Sbjct: 221 CHFNKGTIGATDRGF-------TDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEG 273

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           V   N+  C+ +  +H +++VG+G +E  D     YW+VKNSWG+ WG+K
Sbjct: 274 V--YNEPQCDAQNLDHGVLVVGFGTDESGD----DYWLVKNSWGTTWGDK 317



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 71/155 (45%), Gaps = 16/155 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSDLQQ 104
           F  +H K Y    +   R + F  N  K A+  QR   G   F+  VNK+ DL   + +Q
Sbjct: 32  FKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 91

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           L  G N       +   L+A       D   +   F S  H   LP++ DWR +G ++ V
Sbjct: 92  LMNGFNYT-----LHKQLRA------ADESFKGVTFISPAHVT-LPKSVDWRTKGAVTAV 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS+ G +E  H  +   L  LS Q
Sbjct: 140 KDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQ 174


>gi|255538808|ref|XP_002510469.1| cysteine protease, putative [Ricinus communis]
 gi|223551170|gb|EEF52656.1| cysteine protease, putative [Ricinus communis]
          Length = 366

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 151/316 (47%), Gaps = 62/316 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           LS QHH         K Y++ E+   R + F  N+ +A+ +Q  D  +AV GV KF DL+
Sbjct: 45  LSAQHHFTAFKAKFGKNYATQEEHDYRFKVFKANLRRAQKHQLMDP-SAVHGVTKFSDLT 103

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
             + + Q  GL            L+ P  +++            +   D +PE FDWR  
Sbjct: 104 PREFRRQYLGLK----------KLRLPADAHEA----------PILPTDGIPEDFDWRDH 143

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNG 356
           G ++ VK QG C  CW+FSA G +E  H +    L  LS QQLVDCD           + 
Sbjct: 144 GAVTNVKNQGSCGSCWSFSAAGALEGAHFLATGELVSLSEQQLVDCDHECDPTEYGACDS 203

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M +A +YI+  GG+  ++ YPY    S+RG    E       V  +S +   +E
Sbjct: 204 GCNGGLMTNAFEYILKAGGLEREEDYPYTG--SDRGPCKFERAKIAASVNNFSVVSV-DE 260

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV----IDLNQRLYGTSI--------------- 457
           +++   +   GPL+VG+NA  +  Y GGV    I   ++ +G  +               
Sbjct: 261 DQIAANLVQNGPLAVGINAVFMQTYIGGVSCPYICSKRQDHGVVLVGYGSAGYAPVRLKD 320

Query: 458 -PYWIVKNSWGSDWGE 472
            P+WI+KNSWG +WGE
Sbjct: 321 KPFWIIKNSWGENWGE 336



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 23/169 (13%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M +A +YI+  GG+  ++ YPY    S
Sbjct: 177 ELVSLSEQQLVDCDHECDPTEYGACDSGCNGGLMTNAFEYILKAGGLEREEDYPYTG--S 234

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +RG    E       V  +S +   +E+++   +   GPL+VG+NA  +  Y GGV    
Sbjct: 235 DRGPCKFERAKIAASVNNFSVVSV-DEDQIAANLVQNGPLAVGINAVFMQTYIGGVS--C 291

Query: 608 QRLCNPKAQNHALIIVGYGEE-----EKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ K Q+H +++VGYG         KD    P+WI+KNSWG +WGE
Sbjct: 292 PYICS-KRQDHGVVLVGYGSAGYAPVRLKDK---PFWIIKNSWGENWGE 336



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 22/174 (12%)

Query: 26  LLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSG 85
           L+   +     YL S    F  F     K Y++ E+   R + F  N+ +A+ +Q  D  
Sbjct: 32  LIRQVVPDVEDYLLSAQHHFTAFKAKFGKNYATQEEHDYRFKVFKANLRRAQKHQLMDP- 90

Query: 86  TAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH 144
           +AV  V KF DL+  + + Q  GL            L+ P  +++            +  
Sbjct: 91  SAVHGVTKFSDLTPREFRRQYLGLK----------KLRLPADAHEA----------PILP 130

Query: 145 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            D +PE FDWR  G ++ VK QG C  CW+FSA G +E  H +    L  LS Q
Sbjct: 131 TDGIPEDFDWRDHGAVTNVKNQGSCGSCWSFSAAGALEGAHFLATGELVSLSEQ 184


>gi|96979798|ref|YP_611001.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|37077647|sp|Q91CL9.1|CATV_NPVAP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|16041073|dbj|BAB69773.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|94983331|gb|ABF50271.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|146229694|gb|ABQ12259.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
          Length = 324

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 160/303 (52%), Gaps = 39/303 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQLTG 255
           +   +K YSS  + LRR + F  N+E+  +    D+ +A + +NKF DLS+ + + + TG
Sbjct: 32  LHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDT-SAQYEINKFSDLSKDETISKYTG 90

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L+L          LQ      Q   E+        R  D  P  FDWR    ++ VK QG
Sbjct: 91  LSL---------PLQ-----KQNFCEVVVLD----RPPDKGPLEFDWRRLNKVTSVKNQG 132

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGG 375
            C  CWAF+ +G +E+  AI+ + L  LS QQL+DCD  + GC+GG +  A + +++ GG
Sbjct: 133 MCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDVGCDGGLLHTAYEAVMNMGG 192

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPY+A+     C V   + F V+VK+  R     EE++K  +   GP+ V ++A
Sbjct: 193 IQAENDYPYEANNGP--CRVNAAK-FVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDA 249

Query: 436 NGLFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGE----KVEDKVG 479
           + +  Y  G+I       LN  +    YG    IP+WI+KN+WG+DWGE    +V+  + 
Sbjct: 250 SDIVGYKRGIIRYCENHGLNHAVLLVGYGVENGIPFWILKNTWGADWGEQGYFRVQQNIN 309

Query: 480 SSG 482
           + G
Sbjct: 310 ACG 312



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 93/156 (59%), Gaps = 12/156 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++L+DCD  + GC+GG +  A + +++ GG+ ++  YPY+A+     C V   
Sbjct: 156 QLINLSEQQLIDCDFVDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGP--CRVNAA 213

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           + F V+VK+  R     EE++K  +   GP+ V ++A+ +  Y  G+I    R C     
Sbjct: 214 K-FVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIVGYKRGII----RYCENHGL 268

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           NHA+++VGYG E       IP+WI+KN+WG+DWGE+
Sbjct: 269 NHAVLLVGYGVE-----NGIPFWILKNTWGADWGEQ 299



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 21/163 (12%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P + F  F+   +K YSS  + LRR + F  N+E+  +  + D+ +A +E+NKF DL
Sbjct: 22  LKAP-SYFEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDT-SAQYEINKFSDL 79

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           S D  + + TGL+L          LQ      Q   E+        R  D  P  FDWR 
Sbjct: 80  SKDETISKYTGLSL---------PLQ-----KQNFCEVVVLD----RPPDKGPLEFDWRR 121

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
              ++ VK QG C  CWAF+ +G +E+  AI+ + L  LS Q 
Sbjct: 122 LNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQ 164


>gi|297744465|emb|CBI37727.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 146/292 (50%), Gaps = 57/292 (19%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  H KVY S+E+ L R E F  N+   ++   E S +   G+N+F DLS  + +     
Sbjct: 53  VSKHGKVYKSMEEKLHRFEVFRENLNHIDERNKEVS-SYWLGLNEFADLSHEEFKS---- 107

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                 +D+                             DLPE+ DWR +G ++ VK QG 
Sbjct: 108 ------KDVA----------------------------DLPESVDWRKKGAVTHVKNQGA 133

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  +I  NGG
Sbjct: 134 CGSCWAFSTVAAVEGINQIVTGNLTTLSEQELIDCDTTFNSGCNGGLMDYAFAFIASNGG 193

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           +  +  YPY   E    C   +E+   V +  Y  +P  +EE + K +A + PLSV + A
Sbjct: 194 LHKEDDYPYLMEEGT--CEEQKEDVDIVTISGYEDVPEKDEESLLKALAHQ-PLSVAIEA 250

Query: 436 NG--LFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           +G    +YSGGV       +L+  +    YG+S  + Y IVKNSWG  WGEK
Sbjct: 251 SGRDFQFYSGGVFNGPCGTELDHGVAAVGYGSSKGLDYIIVKNSWGPKWGEK 302



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  +I  NGG+  +  YPY   E    C
Sbjct: 152 IVTGNLTTLSEQELIDCDTTFNSGCNGGLMDYAFAFIASNGGLHKEDDYPYLMEEGT--C 209

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              +E+   V +  Y  +P  +EE + K +A + PLSV + A+G    +YSGGV +    
Sbjct: 210 EEQKEDVDIVTISGYEDVPEKDEESLLKALAHQ-PLSVAIEASGRDFQFYSGGVFN---G 265

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG  +  D     Y IVKNSWG  WGEK
Sbjct: 266 PCGTEL-DHGVAAVGYGSSKGLD-----YIIVKNSWGPKWGEK 302



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 39/161 (24%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           ++  + RF +++  H KVY S+E+ L R E F  N+   ++  +E S +    +N+F DL
Sbjct: 42  IDKLIARFESWVSKHGKVYKSMEEKLHRFEVFRENLNHIDERNKEVS-SYWLGLNEFADL 100

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           S  + +           +D+                             DLPE+ DWR +
Sbjct: 101 SHEEFKS----------KDVA----------------------------DLPESVDWRKK 122

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G ++ VK QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 123 GAVTHVKNQGACGSCWAFSTVAAVEGINQIVTGNLTTLSEQ 163


>gi|118124|sp|P25250.1|CYSP2_HORVU RecName: Full=Cysteine proteinase EP-B 2; Flags: Precursor
 gi|1146118|gb|AAA85036.1| cysteine proteinase EPB2 precursor [Hordeum vulgare subsp. vulgare]
          Length = 373

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 148/294 (50%), Gaps = 40/294 (13%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR   F +N      +           +N+F D+ +++ +     +L        PS+  
Sbjct: 64  RRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPG 123

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
                        F + +L +  DLP + DWR +G ++ VK+QGKC  CWAFS V  VE 
Sbjct: 124 -------------FMYAAL-NVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEG 169

Query: 332 MHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 390
           ++AI+  SL  LS Q+L+DCD + N GC GG MD+A +YI +NGG++++ AYPY+A+   
Sbjct: 170 INAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGT 229

Query: 391 RGCLV---GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV 445
             C V    +     V +  +  +P   EE++ + VA + P+SV + A+G    +YS GV
Sbjct: 230 --CNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQ-PVSVAVEASGKAFMFYSEGV 286

Query: 446 --------IDLNQRLYGTSI-----PYWIVKNSWGSDWGE----KVEDKVGSSG 482
                   +D    + G  +      YW VKNSWG  WGE    +VE   G+SG
Sbjct: 287 FTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASG 340



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 17/169 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +    L  L+ ++L+DCD + N GC GG MD+A +YI +NGG++++ AYPY+A+   
Sbjct: 170 INAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGT 229

Query: 549 RGCLV---GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV 603
             C V    +     V +  +  +P   EE++ + VA + P+SV + A+G    +YS GV
Sbjct: 230 --CNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQ-PVSVAVEASGKAFMFYSEGV 286

Query: 604 IDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                  C  +  +H + +VGYG  E  DG +  YW VKNSWG  WGE+
Sbjct: 287 FTGE---CGTEL-DHGVAVVGYGVAE--DGKA--YWTVKNSWGPSWGEQ 327



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 14/135 (10%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           RR   F +N      + +         +N+F D+  ++ +     +L        PS+  
Sbjct: 64  RRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPG 123

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
                        F + +L +  DLP + DWR +G ++ VK+QGKC  CWAFS V  VE 
Sbjct: 124 -------------FMYAAL-NVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEG 169

Query: 184 MHAIQGNNLTELSVQ 198
           ++AI+  +L  LS Q
Sbjct: 170 INAIRTGSLVSLSEQ 184


>gi|432910512|ref|XP_004078392.1| PREDICTED: cathepsin K-like [Oryzias latipes]
          Length = 331

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 158/326 (48%), Gaps = 43/326 (13%)

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQ 228
           C C     +  V+  M     +   E     H K Y +VE+   R   +  N+   E + 
Sbjct: 4   CTCVLLLLSASVMSQMDETTLDAHWEEWKMTHTKEYITVEEEGIRRAIWEKNLRMIEAHN 63

Query: 229 SEDS---GTAVFGVNKFFDLSESDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRA 284
            E +    T   G+N+F D+++ ++ +++TGL +      + P  + P    +TD  +  
Sbjct: 64  QEAALGMHTYTLGMNQFGDMTQEEVVERMTGLQMP-----LNPEPRVPM---ETDGSLI- 114

Query: 285 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELS 344
                      LP++ D+R +G+++ VK QG C  CWAFS+VG +E   A +  +L +LS
Sbjct: 115 ----------KLPKSVDYRKKGMVTSVKNQGSCGSCWAFSSVGALEGQLAKKTGNLVDLS 164

Query: 345 VQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVK 404
            Q LVDC   N GC GG M +A +Y+ +NGG+ S+ AYPY   +      V    G   +
Sbjct: 165 PQNLVDCVTENDGCGGGYMTNAFKYVQENGGIDSEAAYPYMGEDQPCRYNV---SGLAAQ 221

Query: 405 VKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI--------DLNQRL-- 452
           +K Y  +P G+E  +   +   GP+SVG++A  N   YY  G+         D+N  +  
Sbjct: 222 IKGYKEVPEGDEHALAVALFKAGPVSVGIDASQNSFLYYQKGIYFDRNCNKEDINHAVLA 281

Query: 453 --YGTSI---PYWIVKNSWGSDWGEK 473
             YG +     +WIVKNSWG  WG K
Sbjct: 282 VGYGVNAKGKKFWIVKNSWGETWGNK 307



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 88/168 (52%), Gaps = 14/168 (8%)

Query: 490 LTGVLPSK---LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASE 546
           L G L  K   L  L+ + LVDC   N GC GG M +A +Y+ +NGG+ S+ AYPY   +
Sbjct: 149 LEGQLAKKTGNLVDLSPQNLVDCVTENDGCGGGYMTNAFKYVQENGGIDSEAAYPYMGED 208

Query: 547 SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI 604
                 V    G   ++K Y  +P G+E  +   +   GP+SVG++A  N   YY  G+ 
Sbjct: 209 QPCRYNV---SGLAAQIKGYKEVPEGDEHALAVALFKAGPVSVGIDASQNSFLYYQKGI- 264

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               R CN +  NHA++ VGYG   K       +WIVKNSWG  WG K
Sbjct: 265 -YFDRNCNKEDINHAVLAVGYGVNAKGK----KFWIVKNSWGETWGNK 307



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 23/152 (15%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS---GTAVFEVNKFFDLSDSDL-QQLTG 107
           H K Y +VE+   R   +  N+   E + +E +    T    +N+F D++  ++ +++TG
Sbjct: 35  HTKEYITVEEEGIRRAIWEKNLRMIEAHNQEAALGMHTYTLGMNQFGDMTQEEVVERMTG 94

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           L +      + P  + P    +TD  +             LP++ D+R +G+++ VK QG
Sbjct: 95  LQMP-----LNPEPRVPM---ETDGSLI-----------KLPKSVDYRKKGMVTSVKNQG 135

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            C  CWAFS+VG +E   A +  NL +LS Q+
Sbjct: 136 SCGSCWAFSSVGALEGQLAKKTGNLVDLSPQN 167


>gi|212275830|ref|NP_001130503.1| cysteine protease 1 [Zea mays]
 gi|194689328|gb|ACF78748.1| unknown [Zea mays]
 gi|219886279|gb|ACL53514.1| unknown [Zea mays]
 gi|238010470|gb|ACR36270.1| unknown [Zea mays]
 gi|413920875|gb|AFW60807.1| cysteine protease 1 [Zea mays]
          Length = 354

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 150/295 (50%), Gaps = 44/295 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVE--KAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGL 256
           H + Y    +   R + F  N +   A +   +D  +    +N+F D++  +   + TGL
Sbjct: 58  HGRTYRDEAEKAHRFQVFKANADFVDASNAAGDDKKSYRLELNEFADMTNDEFMAMYTGL 117

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN--SLRHGDDLPEAFDWRAEGVISKVKEQ 314
                          P  +     +M  F++   +L   DD  +  DWR +G ++ +K Q
Sbjct: 118 R--------------PVPAGAK--KMAGFKYGNVTLSDADDDQQTVDWRQKGAVTGIKNQ 161

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDN 373
           G+C CCWAF+AV  VE +H I   +L  LS QQ++DCD   N GCNGG +D+A QYI+ N
Sbjct: 162 GQCGCCWAFAAVAAVEGIHQITTGNLVSLSEQQVLDCDTDGNNGCNGGYIDNAFQYIVGN 221

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++ AYPY A+++     + +       +  Y  +P G+E  +   VA + P+SV +
Sbjct: 222 GGLGTEDAYPYTAAQA-----MCQSVQPVAAISGYQDVPSGDEAALAAAVANQ-PVSVAI 275

Query: 434 NANGLFYYSGGVI---------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           +A+    Y GGV+         +LN  +    YGT+    PYW++KN WG +WGE
Sbjct: 276 DAHNFQLYGGGVMTAASCSTPPNLNHAVTAVGYGTAEDGTPYWLLKNQWGQNWGE 330



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 12/160 (7%)

Query: 493 VLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +    L  L+ ++++DCD   N GCNGG +D+A QYI+ NGG+ ++ AYPY A+++    
Sbjct: 182 ITTGNLVSLSEQQVLDCDTDGNNGCNGGYIDNAFQYIVGNGGLGTEDAYPYTAAQA---- 237

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLC 611
            + +       +  Y  +P G+E  +   VA + P+SV ++A+    Y GGV+       
Sbjct: 238 -MCQSVQPVAAISGYQDVPSGDEAALAAAVANQ-PVSVAIDAHNFQLYGGGVMTA-ASCS 294

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            P   NHA+  VGYG  E  DGT  PYW++KN WG +WGE
Sbjct: 295 TPPNLNHAVTAVGYGTAE--DGT--PYWLLKNQWGQNWGE 330



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 21/161 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVE--KAEDYQREDSGTAVFEVNKFFDLSDSD 101
           R   +M +H + Y    +   R + F  N +   A +   +D  +   E+N+F D+++ +
Sbjct: 50  RHQQWMAEHGRTYRDEAEKAHRFQVFKANADFVDASNAAGDDKKSYRLELNEFADMTNDE 109

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN--SLRHGDDLPEAFDWRAEG 158
              + TGL               P  +     +M  F++   +L   DD  +  DWR +G
Sbjct: 110 FMAMYTGLR--------------PVPAGAK--KMAGFKYGNVTLSDADDDQQTVDWRQKG 153

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            ++ +K QG+C CCWAF+AV  VE +H I   NL  LS Q 
Sbjct: 154 AVTGIKNQGQCGCCWAFAAVAAVEGIHQITTGNLVSLSEQQ 194


>gi|357452075|ref|XP_003596314.1| Cysteine proteinase [Medicago truncatula]
 gi|355485362|gb|AES66565.1| Cysteine proteinase [Medicago truncatula]
          Length = 341

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 44/309 (14%)

Query: 186 AIQGNNLTELSVQ---HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKF 242
            +Q + + E+  Q    H KVY +  +  +R   F  NV   E + +  + +   G+N F
Sbjct: 29  TLQNDPMYEMHEQWMVQHGKVYKAAHEKQKRFGIFKENVNYIEAFNNVGNKSYKLGLNHF 88

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
            DL+  +                  + +  F+     + +  F++ ++    D+P A DW
Sbjct: 89  ADLTNHEF----------------IAARNKFNGYLHGSIITTFKYKNV---SDVPSAVDW 129

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG---GCN 359
           R EG ++ VK QG+C CCWAFSAV   E +H +   +L  LS Q+LVDCD +NG   GC 
Sbjct: 130 RQEGAVTPVKNQGQCGCCWAFSAVASTEGIHKLTTGNLVSLSEQELVDCD-TNGEDQGCE 188

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG MDDA ++II N G+ ++  YPY+  +    C   E       +  Y  +P  +E+ +
Sbjct: 189 GGLMDDAFEFIIQNNGLSTEAEYPYQGVDGT--CNKTEVGSSAATISGYENVPVNDEQAL 246

Query: 420 KKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRLYGTS-------IPYWIVKN 464
           +K VA + P+SV ++A+G    +Y  GV       +L+  +             YW+VKN
Sbjct: 247 QKAVANQ-PVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVAVVGYGVGEDETEYWLVKN 305

Query: 465 SWGSDWGEK 473
           SWG+ WGE+
Sbjct: 306 SWGTQWGEE 314



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 17/160 (10%)

Query: 498 LSRLATEKLVDCDMSNG---GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           L  L+ ++LVDCD +NG   GC GG MDDA ++II N G+ ++  YPY+  +    C   
Sbjct: 167 LVSLSEQELVDCD-TNGEDQGCEGGLMDDAFEFIIQNNGLSTEAEYPYQGVDGT--CNKT 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           E       +  Y  +P  +E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 224 EVGSSAATISGYENVPVNDEQALQKAVANQ-PVSVAIDASGSDFQFYKSGVFTGS---CG 279

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +   ++     E++ +     YW+VKNSWG+ WGE+
Sbjct: 280 TELDHGVAVVGYGVGEDETE-----YWLVKNSWGTQWGEE 314



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 20/166 (12%)

Query: 34  TRGYLNSPVTRFL-NFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVN 92
           +R   N P+      +M  H KVY +  +  +R   F  NV   E +    + +    +N
Sbjct: 27  SRTLQNDPMYEMHEQWMVQHGKVYKAAHEKQKRFGIFKENVNYIEAFNNVGNKSYKLGLN 86

Query: 93  KFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAF 152
            F DL++ +                  + +  F+     + +  F++ ++    D+P A 
Sbjct: 87  HFADLTNHEF----------------IAARNKFNGYLHGSIITTFKYKNV---SDVPSAV 127

Query: 153 DWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           DWR EG ++ VK QG+C CCWAFSAV   E +H +   NL  LS Q
Sbjct: 128 DWRQEGAVTPVKNQGQCGCCWAFSAVASTEGIHKLTTGNLVSLSEQ 173


>gi|2511689|emb|CAB17074.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 364

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 158/307 (51%), Gaps = 48/307 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H KVY+ +++  +R + F  N+   +D+ ++++ T   G+NKF D++  + +        
Sbjct: 43  HRKVYNGLDEKEKRFQVFKDNLGFIQDHNAQNN-TYTLGLNKFADITNEEYR-------- 93

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH------GDDLPEAFDWRAEGVISKVKE 313
                      A +   +TD + R  +  +  H      GD LP   DWR +G +  +K+
Sbjct: 94  -----------AMYLGTRTDAKRRVMKTQNTGHRYAYNSGDQLPVHVDWRLKGAVGPIKD 142

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIID 372
           QG C  CWAFS V  VE ++ I       LS Q+LVDCD   + GCNGG MD A Q+II 
Sbjct: 143 QGNCGSCWAFSTVAAVEGINNIVTGEFVSLSEQELVDCDREYDEGCNGGLMDYAFQFIIQ 202

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ +++ YPY+  +    C   +++   V++  Y  +P   E  +KK V+ + P+SV 
Sbjct: 203 NGGIDTEEDYPYQGIDGT--CDQTKKKTKVVQIDGYEDVPSNNENALKKAVSHQ-PVSVA 259

Query: 433 MNANG--LFYYSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE----KV 474
           + A+G  L  Y  GV        L+  +    YGT   + YW+V+NSWG+ WGE    K+
Sbjct: 260 IEASGRALQLYQSGVFTGKCGTALDHGVVVVGYGTENGVDYWLVRNSWGTGWGEDGYFKM 319

Query: 475 EDKVGSS 481
           E  V S+
Sbjct: 320 ERNVRST 326



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  +   L+ ++LVDCD   + GCNGG MD A Q+II NGG+ +++ YPY+  +  
Sbjct: 161 INNIVTGEFVSLSEQELVDCDREYDEGCNGGLMDYAFQFIIQNGGIDTEEDYPYQGIDGT 220

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C   +++   V++  Y  +P   E  +KK V+ + P+SV + A+G  L  Y  GV   
Sbjct: 221 --CDQTKKKTKVVQIDGYEDVPSNNENALKKAVSHQ-PVSVAIEASGRALQLYQSGVF-- 275

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   A +H +++VGYG E   D     YW+V+NSWG+ WGE
Sbjct: 276 -TGKCG-TALDHGVVVVGYGTENGVD-----YWLVRNSWGTGWGE 313



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 26/166 (15%)

Query: 39  NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLS 98
           N  +  +  ++  H KVY+ +++  +R + F  N+   +D+  +++ T    +NKF D++
Sbjct: 30  NEVMDMYEEWLVKHRKVYNGLDEKEKRFQVFKDNLGFIQDHNAQNN-TYTLGLNKFADIT 88

Query: 99  DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH------GDDLPEAF 152
           + + +                   A +   +TD + R  +  +  H      GD LP   
Sbjct: 89  NEEYR-------------------AMYLGTRTDAKRRVMKTQNTGHRYAYNSGDQLPVHV 129

Query: 153 DWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           DWR +G +  +K+QG C  CWAFS V  VE ++ I       LS Q
Sbjct: 130 DWRLKGAVGPIKDQGNCGSCWAFSTVAAVEGINNIVTGEFVSLSEQ 175


>gi|164519063|ref|NP_001002813.2| cathepsin Q-like 2 precursor [Rattus norvegicus]
 gi|67678196|gb|AAH97257.1| Ctsql2 protein [Rattus norvegicus]
 gi|149039735|gb|EDL93851.1| rCG24202 [Rattus norvegicus]
          Length = 343

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 159/312 (50%), Gaps = 46/312 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS---GTAVFGVNKFFDLSESDLQ-QLTG 255
           ++K+YS  E+LL+R   +  NV+K E +  E+S    T +  +N F DL++ + +  +TG
Sbjct: 36  YEKLYSPEEELLKRVV-WEENVKKIELHNRENSLGKNTYIMEINNFADLTDEEFKDMITG 94

Query: 256 LNL--DSTLEDI-QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
           + L  ++T++ + + +L +PF              NS    D LP++ DWR EG +++V+
Sbjct: 95  ITLPINNTMKSLWKRALGSPFP-------------NSWYWRDALPKSIDWRKEGYVTRVR 141

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYI 370
           EQGKC  CWAF   G +E     +   LT LSVQ LVDC    G  GC GG   +A QY+
Sbjct: 142 EQGKCKSCWAFPVAGAIEGQMFKKTGKLTPLSVQNLVDCSKPQGNKGCRGGTTYNAFQYV 201

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           + NGG+ S+  YPYK  E    C    +  +  K+  +  +P  E+  M   +AT+GP++
Sbjct: 202 LQNGGLESEATYPYKGKEGL--CKYNPKNAY-AKITRFVALPEDEDVLMDA-LATKGPVA 257

Query: 431 VGMNA--NGLFYYSGGVI---DLNQRLYGTSIP--------------YWIVKNSWGSDWG 471
            G++   + L +Y  G+      N R+    +               YW++KNSWG  WG
Sbjct: 258 AGIHVVYSSLRFYKKGIYHEPKCNNRVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKQWG 317

Query: 472 EKVEDKVGSSGN 483
            K   K+    N
Sbjct: 318 LKGYMKIAKDRN 329



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 92/161 (57%), Gaps = 14/161 (8%)

Query: 497 KLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL+ L+ + LVDC    G  GC GG   +A QY++ NGG+ S+  YPYK  E    C   
Sbjct: 168 KLTPLSVQNLVDCSKPQGNKGCRGGTTYNAFQYVLQNGGLESEATYPYKGKEGL--CKYN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
            +  +  K+  +  +P  E+  M   +AT+GP++ G++   + L +Y  G+   ++  CN
Sbjct: 226 PKNAY-AKITRFVALPEDEDVLMDA-LATKGPVAAGIHVVYSSLRFYKKGI--YHEPKCN 281

Query: 613 PKAQNHALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  NHA+++VGYG E  + DG +  YW++KNSWG  WG K
Sbjct: 282 NRV-NHAVLVVGYGFEGNETDGNN--YWLIKNSWGKQWGLK 319



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 89/155 (57%), Gaps = 21/155 (13%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS---GTAVFEVNKFFDLSDSDLQ-QLTG 107
           ++K+YS  E+LL+R   +  NV+K E + RE+S    T + E+N F DL+D + +  +TG
Sbjct: 36  YEKLYSPEEELLKRVV-WEENVKKIELHNRENSLGKNTYIMEINNFADLTDEEFKDMITG 94

Query: 108 LNL--DSTLEDI-QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           + L  ++T++ + + +L +PF              NS    D LP++ DWR EG +++V+
Sbjct: 95  ITLPINNTMKSLWKRALGSPFP-------------NSWYWRDALPKSIDWRKEGYVTRVR 141

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           EQGKC  CWAF   G +E     +   LT LSVQ+
Sbjct: 142 EQGKCKSCWAFPVAGAIEGQMFKKTGKLTPLSVQN 176


>gi|33945877|emb|CAE45588.1| papain-like cysteine proteinase-like protein 1 [Lotus japonicus]
          Length = 359

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 151/320 (47%), Gaps = 69/320 (21%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L  +HH         KVY++ E+   R   F +N+ +A  +Q  D  +AV GV +F DL+
Sbjct: 39  LGAEHHFLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDP-SAVHGVTQFSDLT 97

Query: 247 ESDLQQ----LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
             + Q     L G+ L S   D  P L                        D+LP+ FDW
Sbjct: 98  PMEFQHSVLGLRGVGLPSD-ADSAPILPT----------------------DNLPKDFDW 134

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--------- 353
           R  G ++ VK QG C  CW+FSA G +E  H +    L  LS QQLVDCD          
Sbjct: 135 REHGAVTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHQQCDPEEAG 194

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG M+ A +YI++NGGV+ ++ YPY  S +  G    ++      V  +S + 
Sbjct: 195 SCDSGCNGGLMNSAFEYILNNGGVMREEDYPY--SGTNGGTCKFDKAKIAASVANFSVVS 252

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI-------DLNQRL----YGTSI---- 457
             +E+++   +   GPL+V +NA  +  Y GGV         LN  +    YG+      
Sbjct: 253 R-DEDQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYAPI 311

Query: 458 -----PYWIVKNSWGSDWGE 472
                PYWI+KNSWG +WGE
Sbjct: 312 RMKQKPYWIIKNSWGENWGE 331



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 34/220 (15%)

Query: 447 DLNQRLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS-KLSRLAT 503
           D + R +G   P   VKN  S GS W          S + T  LE    L + +L  L+ 
Sbjct: 131 DFDWREHGAVTP---VKNQGSCGSCW----------SFSATGALEGAHFLSTGELVSLSE 177

Query: 504 EKLVDCDM----------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           ++LVDCD            + GCNGG M+ A +YI++NGGV+ ++ YPY  S +  G   
Sbjct: 178 QQLVDCDHQQCDPEEAGSCDSGCNGGLMNSAFEYILNNGGVMREEDYPY--SGTNGGTCK 235

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
            ++      V  +S +   +E+++   +   GPL+V +NA  +  Y GGV      +C+ 
Sbjct: 236 FDKAKIAASVANFSVVSR-DEDQIAANLVKNGPLAVAINAVYMQTYVGGVS--CPYVCSK 292

Query: 614 KAQNHALIIVGYGEEEKKD--GTSIPYWIVKNSWGSDWGE 651
           K  NH +++VGYG E          PYWI+KNSWG +WGE
Sbjct: 293 KL-NHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGENWGE 331



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 72/159 (45%), Gaps = 28/159 (17%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            FL F R   KVY++ E+   R   F +N+ +A  +Q  D  +AV  V +F DL+  + Q
Sbjct: 44  HFLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDP-SAVHGVTQFSDLTPMEFQ 102

Query: 104 Q----LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
                L G+ L S   D  P L                        D+LP+ FDWR  G 
Sbjct: 103 HSVLGLRGVGLPSD-ADSAPILPT----------------------DNLPKDFDWREHGA 139

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ VK QG C  CW+FSA G +E  H +    L  LS Q
Sbjct: 140 VTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQ 178


>gi|1256830|gb|AAB68374.1| cysteine endopeptidase 1 [Phaseolus vulgaris]
 gi|2959418|emb|CAA12118.1| cysteine protease [Phaseolus vulgaris]
          Length = 364

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 158/307 (51%), Gaps = 48/307 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H KVY+ +++  +R + F  N+   +D+ ++++ T   G+NKF D++  + +        
Sbjct: 43  HRKVYNGLDEKEKRFQVFKDNLGFIQDHNAQNN-TYTLGLNKFADITNKEYR-------- 93

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH------GDDLPEAFDWRAEGVISKVKE 313
                      A +   +TD + R  +  +  H      GD LP   DWR +G +  +K+
Sbjct: 94  -----------AMYLGTRTDAKRRVMKTQNTGHRYAYNSGDQLPVHVDWRLKGAVGPIKD 142

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIID 372
           QG C  CWAFS V  VE ++ I       LS Q+LVDCD   + GCNGG MD A Q+II 
Sbjct: 143 QGNCGSCWAFSTVAAVEGINNIVTGEFVSLSEQELVDCDREYDEGCNGGLMDYAFQFIIQ 202

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ +++ YPY+  +    C   +++   V++  Y  +P   E  +KK V+ + P+SV 
Sbjct: 203 NGGIDTEEDYPYQGIDGT--CDETKKKTKVVQIDGYEDVPSNNENALKKAVSHQ-PVSVA 259

Query: 433 MNANG--LFYYSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE----KV 474
           + A+G  L  Y  GV        L+  +    YGT   + YW+V+NSWG+ WGE    K+
Sbjct: 260 IEASGRALQLYQSGVFTGKCGTALDHGVVVVGYGTENGVDYWLVRNSWGTGWGEDGYFKM 319

Query: 475 EDKVGSS 481
           E  V S+
Sbjct: 320 ERNVRST 326



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  +   L+ ++LVDCD   + GCNGG MD A Q+II NGG+ +++ YPY+  +  
Sbjct: 161 INNIVTGEFVSLSEQELVDCDREYDEGCNGGLMDYAFQFIIQNGGIDTEEDYPYQGIDGT 220

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C   +++   V++  Y  +P   E  +KK V+ + P+SV + A+G  L  Y  GV   
Sbjct: 221 --CDETKKKTKVVQIDGYEDVPSNNENALKKAVSHQ-PVSVAIEASGRALQLYQSGVF-- 275

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   A +H +++VGYG E   D     YW+V+NSWG+ WGE
Sbjct: 276 -TGKCGT-ALDHGVVVVGYGTENGVD-----YWLVRNSWGTGWGE 313



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 26/166 (15%)

Query: 39  NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLS 98
           N  +  +  ++  H KVY+ +++  +R + F  N+   +D+  +++ T    +NKF D++
Sbjct: 30  NEVMDMYEEWLVKHRKVYNGLDEKEKRFQVFKDNLGFIQDHNAQNN-TYTLGLNKFADIT 88

Query: 99  DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH------GDDLPEAF 152
           + + +                   A +   +TD + R  +  +  H      GD LP   
Sbjct: 89  NKEYR-------------------AMYLGTRTDAKRRVMKTQNTGHRYAYNSGDQLPVHV 129

Query: 153 DWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           DWR +G +  +K+QG C  CWAFS V  VE ++ I       LS Q
Sbjct: 130 DWRLKGAVGPIKDQGNCGSCWAFSTVAAVEGINNIVTGEFVSLSEQ 175


>gi|341940310|sp|O70370.2|CATS_MOUSE RecName: Full=Cathepsin S; Flags: Precursor
          Length = 340

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 135/237 (56%), Gaps = 32/237 (13%)

Query: 259 DSTLEDI---QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           D T E+I     +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG
Sbjct: 90  DMTNEEILCRMGALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQG 142

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----MSNGGCNGGRMDDALQYII 371
            C  CWAFSAVG +E    ++   L  LS Q LVDC       N GC GG M +A QYII
Sbjct: 143 SCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYII 202

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           DNGG+ +D +YPYKA++ +  C    +         Y ++P+G+E+ +K+ VAT+GP+SV
Sbjct: 203 DNGGIEADASYPYKATDEK--CHYNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSV 259

Query: 432 GMNA--NGLFYYSGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           G++A  +  F+Y  GV D       +N  +    YGT     YW+VKNSWG ++G++
Sbjct: 260 GIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQ 316



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 99/165 (60%), Gaps = 23/165 (13%)

Query: 497 KLSRLATEKLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           KL  L+ + LVDC       N GC GG M +A QYIIDNGG+ +D +YPYKA++ +  C 
Sbjct: 166 KLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEK--CH 223

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRL 610
              +         Y ++P+G+E+ +K+ VAT+GP+SVG++A  +  F+Y  GV D     
Sbjct: 224 YNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD----- 277

Query: 611 CNPKAQ---NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +P      NH +++VGYG  + KD     YW+VKNSWG ++G++
Sbjct: 278 -DPSCTGNVNHGVLVVGYGTLDGKD-----YWLVKNSWGLNFGDQ 316



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 10/92 (10%)

Query: 111 DSTLEDI---QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           D T E+I     +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG
Sbjct: 90  DMTNEEILCRMGALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQG 142

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            C  CWAFSAVG +E    ++   L  LS Q+
Sbjct: 143 SCGACWAFSAVGALEGQLKLKTGKLISLSAQN 174


>gi|24653516|ref|NP_725347.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|24653518|ref|NP_725348.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|1658527|gb|AAB18345.1| cysteine proteinase 1 [Drosophila melanogaster]
 gi|2305221|gb|AAB65749.1| cysteine proteinase-1 [Drosophila melanogaster]
 gi|7303249|gb|AAF58311.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|21627210|gb|AAM68566.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|54650754|gb|AAV36956.1| LP06554p [Drosophila melanogaster]
 gi|220951982|gb|ACL88534.1| Cp1-PA [synthetic construct]
          Length = 341

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 136/261 (52%), Gaps = 43/261 (16%)

Query: 237 FGVNKFFDLSESDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD 295
             VNK+ DL   + +QL  G N       +   L+A       D   +   F S  H   
Sbjct: 76  LAVNKYADLLHHEFRQLMNGFNYT-----LHKQLRA------ADESFKGVTFISPAH-VT 123

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR +G ++ VK+QG C  CWAFS+ G +E  H  +   L  LS Q LVDC    
Sbjct: 124 LPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKY 183

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYS 409
            N GCNGG MD+A +YI DNGG+ ++++YPY+A +      +G +   + GF       +
Sbjct: 184 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGF-------T 236

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV-----IDLNQRLYGTSI----- 457
            IP G+E++M + VAT GP+SV ++A+     +YS GV      D     +G  +     
Sbjct: 237 DIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGT 296

Query: 458 -----PYWIVKNSWGSDWGEK 473
                 YW+VKNSWG+ WG+K
Sbjct: 297 DESGEDYWLVKNSWGTTWGDK 317



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 104/170 (61%), Gaps = 25/170 (14%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +GVL S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +  
Sbjct: 165 SGVLVS----LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDS 220

Query: 549 ----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGG 602
               +G +   + GF       + IP G+E++M + VAT GP+SV ++A+     +YS G
Sbjct: 221 CHFNKGTVGATDRGF-------TDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEG 273

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           V   N+  C+ +  +H +++VG+G +E  +     YW+VKNSWG+ WG+K
Sbjct: 274 V--YNEPQCDAQNLDHGVLVVGFGTDESGE----DYWLVKNSWGTTWGDK 317



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 71/155 (45%), Gaps = 16/155 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSDLQQ 104
           F  +H K Y    +   R + F  N  K A+  QR   G   F+  VNK+ DL   + +Q
Sbjct: 32  FKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 91

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           L  G N       +   L+A       D   +   F S  H   LP++ DWR +G ++ V
Sbjct: 92  LMNGFNYT-----LHKQLRA------ADESFKGVTFISPAH-VTLPKSVDWRTKGAVTAV 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS+ G +E  H  +   L  LS Q
Sbjct: 140 KDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQ 174


>gi|302816222|ref|XP_002989790.1| hypothetical protein SELMODRAFT_184826 [Selaginella moellendorffii]
 gi|300142356|gb|EFJ09057.1| hypothetical protein SELMODRAFT_184826 [Selaginella moellendorffii]
          Length = 358

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 146/293 (49%), Gaps = 42/293 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H +VY+ + +  RR + F  N E  E++  + + T   G+N F D++  + + L      
Sbjct: 41  HGRVYNGIGEKERRFQIFRDNAEYIEEHNRQVNQTYWLGLNNFADMTHDEFKAL------ 94

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                     + P S    +T    F++   +   +LP   DWR++G ++ VK QG C  
Sbjct: 95  ------YFGTKVPLS----NTIKSGFRY---KDATNLPLDTDWRSKGAVATVKNQGACGS 141

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS V  VE ++ I    L  LS Q+LVDCD   N GCNGG MD A ++II NGG+ S
Sbjct: 142 CWAFSTVAAVEGVNQIVTGELVSLSEQELVDCDKQKNQGCNGGLMDSAFEFIIQNGGLDS 201

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           +  YPYKA      C         V +  +  +P   E ++ K VA + P+SV + A+G 
Sbjct: 202 EADYPYKAVSGS--CDESRRNSHVVTIDGFEDVPAESEADLLKAVANQ-PVSVAIEASGR 258

Query: 439 FY--YSGGV------IDLNQRL----YGTS-------IPYWIVKNSWGSDWGE 472
            +  YSGGV       +L+  +    YGTS         YWIV+NSWG  WGE
Sbjct: 259 NFQLYSGGVYTGHCGYELDHGVVAVGYGTSKTPDGVATDYWIVRNSWGDAWGE 311



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 10/162 (6%)

Query: 493 VLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  +L  L+ ++LVDCD   N GCNGG MD A ++II NGG+ S+  YPYKA      C
Sbjct: 157 IVTGELVSLSEQELVDCDKQKNQGCNGGLMDSAFEFIIQNGGLDSEADYPYKAVSGS--C 214

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
                    V +  +  +P   E ++ K VA + P+SV + A+G  +  YSGGV   +  
Sbjct: 215 DESRRNSHVVTIDGFEDVPAESEADLLKAVANQ-PVSVAIEASGRNFQLYSGGVYTGH-- 271

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C  +  +H ++ VGYG  +  DG +  YWIV+NSWG  WGE
Sbjct: 272 -CGYEL-DHGVVAVGYGTSKTPDGVATDYWIVRNSWGDAWGE 311



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 19/151 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           +M DH +VY+ + +  RR + F  N E  E++ R+ + T    +N F D++  + + L  
Sbjct: 37  WMVDHGRVYNGIGEKERRFQIFRDNAEYIEEHNRQVNQTYWLGLNNFADMTHDEFKAL-- 94

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                         + P S    +T    F++   +   +LP   DWR++G ++ VK QG
Sbjct: 95  ----------YFGTKVPLS----NTIKSGFRY---KDATNLPLDTDWRSKGAVATVKNQG 137

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS V  VE ++ I    L  LS Q
Sbjct: 138 ACGSCWAFSTVAAVEGVNQIVTGELVSLSEQ 168


>gi|332374900|gb|AEE62591.1| unknown [Dendroctonus ponderosae]
          Length = 359

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 149/291 (51%), Gaps = 38/291 (13%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV---FGVNKFFDLSESDLQQLT 254
           Q + KVY +  +L  R E F  N+ K E++  +     V    G+N+F DL+E++ Q L 
Sbjct: 29  QKYGKVYQNDSELSVREEIFKENLAKIEEHNKQFQQNLVSYELGLNQFSDLTEAEFQALL 88

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
            +   S L D            Q   +M   ++NS       P + +W  +GV++ VK Q
Sbjct: 89  TM---SPLTD------------QLTKQME--KYNSEFDIKTAPVSVNWAEKGVVTPVKNQ 131

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNG 374
           G C  CW F+  G +E+  A++  SL  LS QQL+DC+  N GC+GG +  ALQY +++ 
Sbjct: 132 GNCGSCWTFTTTGTIESRLALKTGSLVSLSEQQLLDCNRVNAGCDGGVLSYALQY-VESA 190

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPYKA     G      +      K Y+ I    E ++ K VA  GP++V +N
Sbjct: 191 GLTTEDEYPYKA---WNGTCNSTHKPVAAYTKGYTLIYTRSESDLMKAVA-EGPVAVALN 246

Query: 435 ANGLFYYSGGVIDLNQ---------RLYG----TSIPYWIVKNSWGSDWGE 472
           A+ L YYS G+ + +           + G     ++PYWI+KNSWG+ WGE
Sbjct: 247 ADLLQYYSKGIFNPSACSSTVNHGGLVVGYEENATLPYWIIKNSWGATWGE 297



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 102/193 (52%), Gaps = 23/193 (11%)

Query: 469 DWGEK-VEDKVGSSGN--RTRDLELTGVLPSKLS-------RLATEKLVDCDMSNGGCNG 518
           +W EK V   V + GN         TG + S+L+        L+ ++L+DC+  N GC+G
Sbjct: 118 NWAEKGVVTPVKNQGNCGSCWTFTTTGTIESRLALKTGSLVSLSEQQLLDCNRVNAGCDG 177

Query: 519 GRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMK 578
           G +  ALQY+ ++ G+ ++  YPYKA     G      +      K Y+ I    E ++ 
Sbjct: 178 GVLSYALQYV-ESAGLTTEDEYPYKA---WNGTCNSTHKPVAAYTKGYTLIYTRSESDLM 233

Query: 579 KWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPY 638
           K VA  GP++V +NA+ L YYS G+   N   C+    NH  ++VGY E       ++PY
Sbjct: 234 KAVA-EGPVAVALNADLLQYYSKGI--FNPSACSSTV-NHGGLVVGYEEN-----ATLPY 284

Query: 639 WIVKNSWGSDWGE 651
           WI+KNSWG+ WGE
Sbjct: 285 WIIKNSWGATWGE 297



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 20/158 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAV---FEVNKFFDLSDSD 101
           F+ F + + KVY +  +L  R E F  N+ K E++ ++     V     +N+F DL++++
Sbjct: 24  FVTFQQKYGKVYQNDSELSVREEIFKENLAKIEEHNKQFQQNLVSYELGLNQFSDLTEAE 83

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            Q L  +   S L D            Q   +M   ++NS       P + +W  +GV++
Sbjct: 84  FQALLTM---SPLTD------------QLTKQME--KYNSEFDIKTAPVSVNWAEKGVVT 126

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            VK QG C  CW F+  G +E+  A++  +L  LS Q 
Sbjct: 127 PVKNQGNCGSCWTFTTTGTIESRLALKTGSLVSLSEQQ 164


>gi|356543076|ref|XP_003539989.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 144/294 (48%), Gaps = 37/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + KVY   E+  +R + F  NV   E + +        G+N+F DL+  +       
Sbjct: 43  MARYAKVYKDPEEREKRFKIFKENVNYIEAFNNAADKPYKLGINQFADLTNEEF------ 96

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                   I P  +       + T    F++ ++     LP   DWR +G ++ +K+QG+
Sbjct: 97  --------IAPRNKFKGHMCSSITRTTTFKYENVTA---LPSTVDWRQKGAVTPIKDQGQ 145

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV   E +HA+    L  LS Q++VDCD    + GC GG MD A ++II N 
Sbjct: 146 CGCCWAFSAVAATEGIHALNSGKLISLSEQEVVDCDTKGEDQGCAGGFMDGAFKFIIQNH 205

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPYKA + +  C   E       +  Y  +P   E+ ++K VA + P+SV ++
Sbjct: 206 GLNTEANYPYKAVDGK--CNANEAANHAATITGYEDVPVNNEKALQKAVANQ-PVSVAID 262

Query: 435 ANG---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           A+G    FY +G            GV  +   +      YW+VKNSWG++WGE+
Sbjct: 263 ASGSDFQFYKTGVFTGSCGTQLDHGVTAVGYGVSADGTQYWLVKNSWGTEWGEE 316



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ +++VDCD    + GC GG MD A ++II N G+ ++  YPYKA + +  C   
Sbjct: 168 KLISLSEQEVVDCDTKGEDQGCAGGFMDGAFKFIIQNHGLNTEANYPYKAVDGK--CNAN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           E       +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 226 EAANHAATITGYEDVPVNNEKALQKAVANQ-PVSVAIDASGSDFQFYKTGVFTGS---CG 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG++WGE+
Sbjct: 282 TQL-DHGVTAVGYGVS--ADGTQ--YWLVKNSWGTEWGEE 316



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   E+  +R + F  NV   E +           +N+F DL++ +  
Sbjct: 38  RHEEWMARYAKVYKDPEEREKRFKIFKENVNYIEAFNNAADKPYKLGINQFADLTNEEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +       + T    F++ ++     LP   DWR +G ++ +
Sbjct: 97  -------------IAPRNKFKGHMCSSITRTTTFKYENVTA---LPSTVDWRQKGAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +HA+    L  LS Q
Sbjct: 141 KDQGQCGCCWAFSAVAATEGIHALNSGKLISLSEQ 175


>gi|255543801|ref|XP_002512963.1| cysteine protease, putative [Ricinus communis]
 gi|223547974|gb|EEF49466.1| cysteine protease, putative [Ricinus communis]
          Length = 373

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 155/320 (48%), Gaps = 62/320 (19%)

Query: 191 NLTELSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKF 242
           N   L  +HH         K Y+S E+   R + F +N+ +AE +Q  D  TA  GV +F
Sbjct: 48  NPNLLGAEHHFSLFKKKFKKTYASQEEHDYRFKIFKSNLRRAERHQKLDP-TATHGVTQF 106

Query: 243 FDLSESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 301
            DL+ S+ + Q  GL            L+ P  +N+            +   +DLP  FD
Sbjct: 107 SDLTHSEFRRQFLGLR----------RLRLPKDANEA----------PMLPTNDLPADFD 146

Query: 302 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--------- 352
           WR +G ++ VK QG C  CW+FS  G +E  + +    L  LS QQLVDCD         
Sbjct: 147 WREKGAVTAVKNQGSCGSCWSFSTTGALEGANYLATGKLVSLSEQQLVDCDHECDPAEEG 206

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG M+ A +Y +  GG++ ++ YPY    ++RG    ++     KV  +S + 
Sbjct: 207 ACDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG--TDRGACQFDKTKIAAKVANFSVVS 264

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQRL--------YGTS----- 456
             +E+++   +   GPL+V +NA  +  Y GGV      ++RL        YG++     
Sbjct: 265 L-DEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRLDHGVLLVGYGSAGYAPI 323

Query: 457 ----IPYWIVKNSWGSDWGE 472
                PYWI+KNSWG +WGE
Sbjct: 324 RMKEKPYWIIKNSWGENWGE 343



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 29/172 (16%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GCNGG M+ A +Y +  GG++ ++ YPY    +
Sbjct: 184 KLVSLSEQQLVDCDHECDPAEEGACDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG--T 241

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +RG    ++     KV  +S +   +E+++   +   GPL+V +NA  +  Y GGV    
Sbjct: 242 DRGACQFDKTKIAAKVANFSVVSL-DEDQIAANLVKNGPLAVAINAVFMQTYIGGVS--C 298

Query: 608 QRLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ K  +H +++VGYG         +EK      PYWI+KNSWG +WGE
Sbjct: 299 PYICS-KRLDHGVLLVGYGSAGYAPIRMKEK------PYWIIKNSWGENWGE 343



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 22/146 (15%)

Query: 55  VYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGLNLDST 113
            Y+S E+   R + F +N+ +AE +Q+ D  TA   V +F DL+ S+ + Q  GL     
Sbjct: 68  TYASQEEHDYRFKIFKSNLRRAERHQKLDP-TATHGVTQFSDLTHSEFRRQFLGLR---- 122

Query: 114 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 173
                  L+ P  +N+            +   +DLP  FDWR +G ++ VK QG C  CW
Sbjct: 123 ------RLRLPKDANEA----------PMLPTNDLPADFDWREKGAVTAVKNQGSCGSCW 166

Query: 174 AFSAVGVVEAMHAIQGNNLTELSVQH 199
           +FS  G +E  + +    L  LS Q 
Sbjct: 167 SFSTTGALEGANYLATGKLVSLSEQQ 192


>gi|154332645|ref|XP_001562139.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059587|emb|CAM37169.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 155/296 (52%), Gaps = 41/296 (13%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL--QQLTG 255
           Q + +VY+++++  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE +   + L+G
Sbjct: 43  QTYQRVYATLDEEQQRLANFQRNLELMREHQANNP-HARFGITKFFDLSEEEFATRYLSG 101

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL---PEAFDWRAEGVISKVK 312
                             +++    +  A Q+   + G DL   P A DWR +G ++ VK
Sbjct: 102 ------------------ATHFAKAKKFASQYYR-KVGADLSTAPAAVDWREKGAVTPVK 142

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
           +QG C  CWAFSA+G +E+   +  +SL  LS Q+LV CD  + GCNGG M  A  ++++
Sbjct: 143 DQGMCGSCWAFSAIGNIESKWYLATHSLISLSEQELVSCDDVDEGCNGGLMLQAFDWLLN 202

Query: 373 --NGGVVSDQAYPYKASE-SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
             NG V +  +YPY +   S   C    +      +  +  I    E+ M  W+A  GP+
Sbjct: 203 NRNGAVYTGASYPYVSGNGSVPECSESSDLVIGAYIDGHVTIE-SNEDTMAAWLAANGPI 261

Query: 430 SVGMNANGLFYYSGGVI---DLNQRLYGT---------SIPYWIVKNSWGSDWGEK 473
           ++ ++A+    Y+GGV+   D  Q  +G           +PYW++KNSWG +WGEK
Sbjct: 262 AIAVDASAFMSYTGGVLTSCDGKQLNHGVLLVGYNMTGEVPYWLIKNSWGENWGEK 317



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASE-SERGCLVG 554
           L  L+ ++LV CD  + GCNGG M  A  ++++N  G V +  +YPY +   S   C   
Sbjct: 170 LISLSEQELVSCDDVDEGCNGGLMLQAFDWLLNNRNGAVYTGASYPYVSGNGSVPECSES 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +      +  +  I    E+ M  W+A  GP+++ ++A+    Y+GGV+      C+ K
Sbjct: 230 SDLVIGAYIDGHVTIE-SNEDTMAAWLAANGPIAIAVDASAFMSYTGGVLTS----CDGK 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             NH +++VGY    +     +PYW++KNSWG +WGEK
Sbjct: 285 QLNHGVLLVGYNMTGE-----VPYWLIKNSWGENWGEK 317



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 26/168 (15%)

Query: 37  YLNSPVT-RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+  PV+  F  F + + +VY+++++  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGRPVSVLFEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNP-HARFGITKFF 87

Query: 96  DLSDSDL--QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL---PE 150
           DLS+ +   + L+G                  +++    +  A Q+   + G DL   P 
Sbjct: 88  DLSEEEFATRYLSG------------------ATHFAKAKKFASQYYR-KVGADLSTAPA 128

Query: 151 AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           A DWR +G ++ VK+QG C  CWAFSA+G +E+   +  ++L  LS Q
Sbjct: 129 AVDWREKGAVTPVKDQGMCGSCWAFSAIGNIESKWYLATHSLISLSEQ 176


>gi|390608645|ref|NP_001254624.1| cathepsin S isoform 1 preproprotein [Mus musculus]
 gi|74214026|dbj|BAE29430.1| unnamed protein product [Mus musculus]
          Length = 343

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 135/237 (56%), Gaps = 32/237 (13%)

Query: 259 DSTLEDI---QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           D T E+I     +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG
Sbjct: 93  DMTNEEILCRMGALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQG 145

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----MSNGGCNGGRMDDALQYII 371
            C  CWAFSAVG +E    ++   L  LS Q LVDC       N GC GG M +A QYII
Sbjct: 146 SCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYII 205

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           DNGG+ +D +YPYKA++ +  C    +         Y ++P+G+E+ +K+ VAT+GP+SV
Sbjct: 206 DNGGIEADASYPYKATDEK--CHYNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSV 262

Query: 432 GMNA--NGLFYYSGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           G++A  +  F+Y  GV D       +N  +    YGT     YW+VKNSWG ++G++
Sbjct: 263 GIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQ 319



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 99/165 (60%), Gaps = 23/165 (13%)

Query: 497 KLSRLATEKLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           KL  L+ + LVDC       N GC GG M +A QYIIDNGG+ +D +YPYKA++ +  C 
Sbjct: 169 KLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEK--CH 226

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRL 610
              +         Y ++P+G+E+ +K+ VAT+GP+SVG++A  +  F+Y  GV D     
Sbjct: 227 YNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD----- 280

Query: 611 CNPKAQ---NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +P      NH +++VGYG  + KD     YW+VKNSWG ++G++
Sbjct: 281 -DPSCTGNVNHGVLVVGYGTLDGKD-----YWLVKNSWGLNFGDQ 319



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 10/92 (10%)

Query: 111 DSTLEDI---QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           D T E+I     +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG
Sbjct: 93  DMTNEEILCRMGALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQG 145

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            C  CWAFSAVG +E    ++   L  LS Q+
Sbjct: 146 SCGACWAFSAVGALEGQLKLKTGKLISLSAQN 177


>gi|392306967|ref|NP_067256.3| cathepsin S isoform 2 preproprotein [Mus musculus]
 gi|26390492|dbj|BAC25906.1| unnamed protein product [Mus musculus]
 gi|148706872|gb|EDL38819.1| cathepsin S [Mus musculus]
          Length = 342

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 135/237 (56%), Gaps = 32/237 (13%)

Query: 259 DSTLEDI---QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           D T E+I     +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG
Sbjct: 92  DMTNEEILCRMGALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQG 144

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----MSNGGCNGGRMDDALQYII 371
            C  CWAFSAVG +E    ++   L  LS Q LVDC       N GC GG M +A QYII
Sbjct: 145 SCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYII 204

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           DNGG+ +D +YPYKA++ +  C    +         Y ++P+G+E+ +K+ VAT+GP+SV
Sbjct: 205 DNGGIEADASYPYKATDEK--CHYNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSV 261

Query: 432 GMNA--NGLFYYSGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           G++A  +  F+Y  GV D       +N  +    YGT     YW+VKNSWG ++G++
Sbjct: 262 GIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQ 318



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 99/165 (60%), Gaps = 23/165 (13%)

Query: 497 KLSRLATEKLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           KL  L+ + LVDC       N GC GG M +A QYIIDNGG+ +D +YPYKA++ +  C 
Sbjct: 168 KLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEK--CH 225

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRL 610
              +         Y ++P+G+E+ +K+ VAT+GP+SVG++A  +  F+Y  GV D     
Sbjct: 226 YNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD----- 279

Query: 611 CNPKAQ---NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +P      NH +++VGYG  + KD     YW+VKNSWG ++G++
Sbjct: 280 -DPSCTGNVNHGVLVVGYGTLDGKD-----YWLVKNSWGLNFGDQ 318



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 10/92 (10%)

Query: 111 DSTLEDI---QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           D T E+I     +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG
Sbjct: 92  DMTNEEILCRMGALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQG 144

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            C  CWAFSAVG +E    ++   L  LS Q+
Sbjct: 145 SCGACWAFSAVGALEGQLKLKTGKLISLSAQN 176


>gi|356515052|ref|XP_003526215.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 339

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 150/291 (51%), Gaps = 33/291 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + K+Y+   +  +R + F  NV+  E + +         +N+F DL   + +     
Sbjct: 41  MAQYGKLYTDAAEKEKRFQIFKNNVQFIESFNAAGDKPFNLSINQFADLHNEEFK----- 95

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              ++L ++Q       S  +T TE  +F++ S+     +P   DWR  G ++ +K+QG 
Sbjct: 96  ---ASLINVQKKE----SGVETATET-SFRYESI---TKIPVTMDWRKRGAVTPIKDQGN 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG-GCNGGRMDDALQYIIDNGG 375
           C  CWAFS V  +E +H I    L  LS Q+LVDC      GCN G  ++A +++  NGG
Sbjct: 145 CGSCWAFSTVAAIEGIHQITTGKLVSLSEQELVDCVKGKSEGCNFGYKEEAFEFVAKNGG 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + S+ +YPYKA  + + C+V +E     ++K Y  +P   E+ + K VA + P+SV ++A
Sbjct: 205 LASEISYPYKA--NNKTCMVKKETQGVAQIKGYENVPSNSEKALLKAVANQ-PVSVYIDA 261

Query: 436 NGLFYYSGGVID------LNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
             L +YS G+         N  +    YG +     YW+VKNSWG+ WGEK
Sbjct: 262 GALQFYSSGIFTGKCGTAPNHAVTVIGYGKARGGAKYWLVKNSWGTKWGEK 312



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 92/161 (57%), Gaps = 12/161 (7%)

Query: 493 VLPSKLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   KL  L+ ++LVDC      GCN G  ++A +++  NGG+ S+ +YPYKA  + + C
Sbjct: 163 ITTGKLVSLSEQELVDCVKGKSEGCNFGYKEEAFEFVAKNGGLASEISYPYKA--NNKTC 220

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLC 611
           +V +E     ++K Y  +P   E+ + K VA + P+SV ++A  L +YS G+       C
Sbjct: 221 MVKKETQGVAQIKGYENVPSNSEKALLKAVANQ-PVSVYIDAGALQFYSSGIFTGK---C 276

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              A NHA+ ++GYG    K      YW+VKNSWG+ WGEK
Sbjct: 277 GT-APNHAVTVIGYG----KARGGAKYWLVKNSWGTKWGEK 312



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 16/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + K+Y+   +  +R + F  NV+  E +           +N+F DL + + +
Sbjct: 36  RHEKWMAQYGKLYTDAAEKEKRFQIFKNNVQFIESFNAAGDKPFNLSINQFADLHNEEFK 95

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   ++L ++Q       S  +T TE  +F++ S+     +P   DWR  G ++ +
Sbjct: 96  --------ASLINVQKKE----SGVETATET-SFRYESI---TKIPVTMDWRKRGAVTPI 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS V  +E +H I    L  LS Q
Sbjct: 140 KDQGNCGSCWAFSTVAAIEGIHQITTGKLVSLSEQ 174


>gi|226469954|emb|CAX70258.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 141/298 (47%), Gaps = 46/298 (15%)

Query: 202 KVYSSVEDLLRRH----ENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           + Y +V +  +R      NF+  +E    YQ E   T   GVN F D +E +L++L G  
Sbjct: 71  RAYGNVMEETKRFLIFGTNFIKMMEHNRAYQ-EGKATYKMGVNNFTDKTEYELRKLRGYR 129

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             S     +P               +   F S  H   LP+  DWR  G ++ VK QG+C
Sbjct: 130 --SACRIAKP---------------KGSTFISSEHAK-LPDRVDWRRNGAVTPVKNQGQC 171

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGG 375
             CWAFS+ G +E  H  + N L  LS QQL+DC  S  N GC GG MD A QY+ DN G
Sbjct: 172 GSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRDNEG 231

Query: 376 VVSDQAYPYKASESERG--CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           + S+ +YPY + + +    CL         +V  Y  I  G+E  +   V T GP+SV +
Sbjct: 232 IDSEISYPYISGDGDENVRCLF-NFTNIMAQVTGYINIHEGDERALMNAVTTIGPVSVAI 290

Query: 434 NA--NGLFYYSGGV------------IDLNQRLYGTSI----PYWIVKNSWGSDWGEK 473
           NA  +    Y  G+            +D    L G  I    PYW++KNSWG DWG+K
Sbjct: 291 NAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDK 348



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 12/163 (7%)

Query: 496 SKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG--C 551
           ++L  L+ ++L+DC  S  N GC GG MD A QY+ DN G+ S+ +YPY + + +    C
Sbjct: 192 NRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRDNEGIDSEISYPYISGDGDENVRC 251

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQR 609
           L         +V  Y  I  G+E  +   V T GP+SV +NA  +    Y  G+    + 
Sbjct: 252 LF-NFTNIMAQVTGYINIHEGDERALMNAVTTIGPVSVAINAGLSSFSMYKSGIYSDPEC 310

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               +  +H +++VGYG E+ K     PYW++KNSWG DWG+K
Sbjct: 311 ASASEDLDHGVLLVGYGIEDGK-----PYWLIKNSWGEDWGDK 348



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 19/154 (12%)

Query: 46  LNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL 105
           +NF R +  V    +  L    NF+  +E    YQ E   T    VN F D ++ +L++L
Sbjct: 67  INFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQ-EGKATYKMGVNNFTDKTEYELRKL 125

Query: 106 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 165
            G    S     +P               +   F S  H   LP+  DWR  G ++ VK 
Sbjct: 126 RGYR--SACRIAKP---------------KGSTFISSEHAK-LPDRVDWRRNGAVTPVKN 167

Query: 166 QGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           QG+C  CWAFS+ G +E  H  + N L  LS Q 
Sbjct: 168 QGQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQ 201


>gi|226502454|ref|NP_001140922.1| hypothetical protein [Zea mays]
 gi|223948637|gb|ACN28402.1| unknown [Zea mays]
 gi|413920877|gb|AFW60809.1| hypothetical protein ZEAMMB73_830238 [Zea mays]
          Length = 354

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 149/295 (50%), Gaps = 44/295 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVE--KAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGL 256
           H + Y    +   R + F  N +   A +   +D  +    +N+F D++  +   + TGL
Sbjct: 58  HGRTYRDEAEKAHRFQVFKANADFVDASNAAGDDKKSYRMELNEFADMTNDEFMAMYTGL 117

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN--SLRHGDDLPEAFDWRAEGVISKVKEQ 314
                          P  +     +M  F++   +L   DD  +  DWR +G ++ +K Q
Sbjct: 118 R--------------PVPAGAK--KMAGFKYGNVTLSDADDNQQTVDWRQKGAVTGIKNQ 161

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDN 373
           G+C CCWAF+AV  VE +H I   +L  LS QQ++DCD   N GCNGG +D+A QYI  N
Sbjct: 162 GQCGCCWAFAAVAAVEGIHQITTGNLVSLSEQQVLDCDTEGNNGCNGGYIDNAFQYIAGN 221

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++ AYPY A+++     + +       +  Y  +P G+E  +   VA + P+SV +
Sbjct: 222 GGLATEDAYPYTAAQA-----MCQSVQPVAAISGYQDVPSGDEAALAAAVANQ-PVSVAI 275

Query: 434 NANGLFYYSGGVI---------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           +A+    Y GGV+         +LN  +    YGT+    PYW++KN WG +WGE
Sbjct: 276 DAHNFQLYGGGVMTAASCSTPPNLNHAVTAVGYGTAEDGTPYWLLKNQWGQNWGE 330



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 12/160 (7%)

Query: 493 VLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +    L  L+ ++++DCD   N GCNGG +D+A QYI  NGG+ ++ AYPY A+++    
Sbjct: 182 ITTGNLVSLSEQQVLDCDTEGNNGCNGGYIDNAFQYIAGNGGLATEDAYPYTAAQA---- 237

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLC 611
            + +       +  Y  +P G+E  +   VA + P+SV ++A+    Y GGV+       
Sbjct: 238 -MCQSVQPVAAISGYQDVPSGDEAALAAAVANQ-PVSVAIDAHNFQLYGGGVMTA-ASCS 294

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            P   NHA+  VGYG  E  DGT  PYW++KN WG +WGE
Sbjct: 295 TPPNLNHAVTAVGYGTAE--DGT--PYWLLKNQWGQNWGE 330



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 21/161 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVE--KAEDYQREDSGTAVFEVNKFFDLSDSD 101
           R   +M +H + Y    +   R + F  N +   A +   +D  +   E+N+F D+++ +
Sbjct: 50  RHQQWMAEHGRTYRDEAEKAHRFQVFKANADFVDASNAAGDDKKSYRMELNEFADMTNDE 109

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN--SLRHGDDLPEAFDWRAEG 158
              + TGL               P  +     +M  F++   +L   DD  +  DWR +G
Sbjct: 110 FMAMYTGLR--------------PVPAGAK--KMAGFKYGNVTLSDADDNQQTVDWRQKG 153

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            ++ +K QG+C CCWAF+AV  VE +H I   NL  LS Q 
Sbjct: 154 AVTGIKNQGQCGCCWAFAAVAAVEGIHQITTGNLVSLSEQQ 194


>gi|255580659|ref|XP_002531152.1| cysteine protease, putative [Ricinus communis]
 gi|223529265|gb|EEF31237.1| cysteine protease, putative [Ricinus communis]
          Length = 340

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 147/288 (51%), Gaps = 38/288 (13%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           +VYS  ++   R++ F  NV++ E +      +   G+N+F DL+  + +          
Sbjct: 48  RVYSDAKEKEIRYKIFKENVQRIESFNKASEKSYKLGINQFADLTNEEFK---------- 97

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
                 + +  F  +   ++   F++ ++     +P + DWR EG ++ +K+QG+C  CW
Sbjct: 98  ------TSRNRFKGHMCSSQAGPFRYENITA---VPSSMDWRKEGAVTAIKDQGQCGSCW 148

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSD 379
           AFSAV  VE +  +  + L  LS Q+LVDCD    + GC GG MDDA ++I  N G+ ++
Sbjct: 149 AFSAVAAVEGITQLATSKLISLSEQELVDCDTKGEDQGCQGGLMDDAFKFIEQNQGLTTE 208

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG-- 437
             YPY+ S+    C   +E     K+  +  +P   E  + K VA + P+SV ++A G  
Sbjct: 209 ANYPYEGSDGT--CNTKQEANHAAKINGFEDVPANNEGALMKAVAKQ-PVSVAIDAGGFE 265

Query: 438 LFYYSGGVI--DLNQRL--------YGTS--IPYWIVKNSWGSDWGEK 473
             +YS G+   D    L        YG S  + YW+VKNSWG+ WGE+
Sbjct: 266 FQFYSSGIFTGDCGTELDHGVAAVGYGESNGMNYWLVKNSWGTQWGEE 313



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 20/169 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +  SKL  L+ ++LVDCD    + GC GG MDDA ++I  N G+ ++  YPY+ S+ 
Sbjct: 159 ITQLATSKLISLSEQELVDCDTKGEDQGCQGGLMDDAFKFIEQNQGLTTEANYPYEGSDG 218

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI- 604
              C   +E     K+  +  +P   E  + K VA + P+SV ++A G    +YS G+  
Sbjct: 219 T--CNTKQEANHAAKINGFEDVPANNEGALMKAVAKQ-PVSVAIDAGGFEFQFYSSGIFT 275

Query: 605 -DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            D    L      +H +  VGYGE        + YW+VKNSWG+ WGE+
Sbjct: 276 GDCGTEL------DHGVAAVGYGES-----NGMNYWLVKNSWGTQWGEE 313



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 19/151 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           +M    +VYS  ++   R++ F  NV++ E + +    +    +N+F DL++ + +    
Sbjct: 42  WMTRFKRVYSDAKEKEIRYKIFKENVQRIESFNKASEKSYKLGINQFADLTNEEFK---- 97

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                       + +  F  +   ++   F++ ++     +P + DWR EG ++ +K+QG
Sbjct: 98  ------------TSRNRFKGHMCSSQAGPFRYENITA---VPSSMDWRKEGAVTAIKDQG 142

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +C  CWAFSAV  VE +  +  + L  LS Q
Sbjct: 143 QCGSCWAFSAVAAVEGITQLATSKLISLSEQ 173


>gi|444724527|gb|ELW65130.1| Cathepsin W [Tupaia chinensis]
          Length = 491

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 148/302 (49%), Gaps = 47/302 (15%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            +++ YSS  +  RR + F  N+ +A+  Q ED GTA FGV  F DL++ +  Q+     
Sbjct: 174 QYNRSYSSPAEHARRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTDEEFSQV----- 228

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                      + P    +    +R  +  SL+ G  +P   DWR   +IS ++ Q  C+
Sbjct: 229 ----------YKQPKVPGEVPRMVR--KVRSLKQGKPVPPTCDWRKARIISPIRNQKNCS 276

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
           CCWA +A   +EA   I+ N   ++SVQ+L+DC     GC GG + DA   +++N G+ S
Sbjct: 277 CCWAMAAADNIEAQWGIRYNQSVKVSVQELLDCGRCGDGCKGGWVWDAFITVLNNSGLAS 336

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           ++ YPY+++   + C V      KV   +   +    E+ + +++A+ GP++V +N   L
Sbjct: 337 EKDYPYQSNVDPQRCRVKRN---KVAWIQDFIMLQDNEQIIAQYLASHGPITVTINMKPL 393

Query: 439 FYYSGGV------------IDLNQRLYG---------------TSIPYWIVKNSWGSDWG 471
             Y  GV            +D +  L G               +S PYWI+KNSWG+ WG
Sbjct: 394 KQYRKGVFEATPATCDPWLVDHSVLLVGFGSSKSVKGMRAGTASSKPYWILKNSWGAKWG 453

Query: 472 EK 473
           EK
Sbjct: 454 EK 455



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 90/159 (56%), Gaps = 9/159 (5%)

Query: 500 RLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 559
           +++ ++L+DC     GC GG + DA   +++N G+ S++ YPY+++   + C V      
Sbjct: 300 KVSVQELLDCGRCGDGCKGGWVWDAFITVLNNSGLASEKDYPYQSNVDPQRCRVKRN--- 356

Query: 560 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHA 619
           KV   +   +    E+ + +++A+ GP++V +N   L  Y  GV +     C+P   +H+
Sbjct: 357 KVAWIQDFIMLQDNEQIIAQYLASHGPITVTINMKPLKQYRKGVFEATPATCDPWLVDHS 416

Query: 620 LIIVGYGEEEKKDG------TSIPYWIVKNSWGSDWGEK 652
           +++VG+G  +   G      +S PYWI+KNSWG+ WGEK
Sbjct: 417 VLLVGFGSSKSVKGMRAGTASSKPYWILKNSWGAKWGEK 455



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 27/205 (13%)

Query: 4   PPWVSLGEKGLGYLHTFMIKVALLESNIFQ-TRGYLNS--PVTR-------FLNFMRDHD 53
           PP  + G   +         + LL  ++ Q  RG+L +  P  R       F  F   ++
Sbjct: 117 PPEPTPGHTTMAPTTHLSCLLTLLAIDLAQGLRGFLGAQDPGPRPLELKEVFALFQIQYN 176

Query: 54  KVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDST 113
           + YSS  +  RR + F  N+ +A+  Q ED GTA F V  F DL+D +  Q+        
Sbjct: 177 RSYSSPAEHARRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTDEEFSQV-------- 228

Query: 114 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 173
                   + P    +    +R  +  SL+ G  +P   DWR   +IS ++ Q  C+CCW
Sbjct: 229 -------YKQPKVPGEVPRMVR--KVRSLKQGKPVPPTCDWRKARIISPIRNQKNCSCCW 279

Query: 174 AFSAVGVVEAMHAIQGNNLTELSVQ 198
           A +A   +EA   I+ N   ++SVQ
Sbjct: 280 AMAAADNIEAQWGIRYNQSVKVSVQ 304


>gi|124484387|dbj|BAF46304.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 474

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 158/290 (54%), Gaps = 34/290 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y++V++  +R + F  N++  ++  S ++ +   G+N+F D++  + +  TG    
Sbjct: 57  HGKSYNAVDEKDKRFKIFRDNLKYIDEKNSLENRSYKLGLNRFADITNEEYR--TGY--- 111

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                    L A   +++   + ++ ++  +  GD LP++ DWR +G ++ VK+QG C  
Sbjct: 112 ---------LGAKRDASRNMVKSKSDRYAPVA-GDSLPDSIDWREKGAVTGVKDQGSCGS 161

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS +  VE ++ +   +L  LS Q+LVDCD   N GCNGG M  A Q+II NGG+ S
Sbjct: 162 CWAFSTIAAVEGVNQLATGNLISLSEQELVDCDRKINQGCNGGDMGYAFQFIIKNGGIDS 221

Query: 379 DQAYPYKASESERGCLVGEEEGFKV-KVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++ YPY   + +  C    +   KV  +  Y  +P   E+ ++K VA + P+SV + A G
Sbjct: 222 EEDYPYTGKDGK--CDSYRQNNAKVASIDGYEEVPVNNEKSLQKAVANQ-PVSVAIEAGG 278

Query: 438 LFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
             +  YS G+       DL+  +    YGT   + YWIVKNSWG  WGEK
Sbjct: 279 YDFQLYSSGIFTGSCGTDLDHGVAAVGYGTENGVDYWIVKNSWGDYWGEK 328



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 86/159 (54%), Gaps = 16/159 (10%)

Query: 498 LSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           L  L+ ++LVDCD   N GCNGG M  A Q+II NGG+ S++ YPY   + +  C    +
Sbjct: 182 LISLSEQELVDCDRKINQGCNGGDMGYAFQFIIKNGGIDSEEDYPYTGKDGK--CDSYRQ 239

Query: 557 EGFKV-KVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNP 613
              KV  +  Y  +P   E+ ++K VA + P+SV + A G  +  YS G+   +   C  
Sbjct: 240 NNAKVASIDGYEEVPVNNEKSLQKAVANQ-PVSVAIEAGGYDFQLYSSGIFTGS---CGT 295

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              +H +  VGYG E   D     YWIVKNSWG  WGEK
Sbjct: 296 DL-DHGVAAVGYGTENGVD-----YWIVKNSWGDYWGEK 328



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 82/154 (53%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F +++  H K Y++V++  +R + F  N++  ++    ++ +    +N+F D+++ + + 
Sbjct: 50  FESWLVKHGKSYNAVDEKDKRFKIFRDNLKYIDEKNSLENRSYKLGLNRFADITNEEYR- 108

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            TG             L A   +++   + ++ ++  +  GD LP++ DWR +G ++ VK
Sbjct: 109 -TGY------------LGAKRDASRNMVKSKSDRYAPVA-GDSLPDSIDWREKGAVTGVK 154

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFS +  VE ++ +   NL  LS Q
Sbjct: 155 DQGSCGSCWAFSTIAAVEGVNQLATGNLISLSEQ 188


>gi|18403438|ref|NP_565780.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|2342728|gb|AAB67626.1| cysteine proteinase [Arabidopsis thaliana]
 gi|330253821|gb|AEC08915.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 345

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/279 (36%), Positives = 146/279 (52%), Gaps = 37/279 (13%)

Query: 213 RHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGLNLDSTLEDIQPS-LQ 270
           R + F  N++  E++  + + +   GVN+F D +  +   + TGL     L ++ PS + 
Sbjct: 59  RRDVFKKNLKFIENFNKKGNKSYKLGVNEFADWTNEEFLAIHTGLK---GLTEVSPSKVV 115

Query: 271 APFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVE 330
           A   S+QT               D + E+ DWRAEG ++ VK QG+C CCWAFSAV  VE
Sbjct: 116 AKTISSQT-----------WNVSDMVVESKDWRAEGAVTPVKYQGQCGCCWAFSAVAAVE 164

Query: 331 AMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 389
            +  I G +L  LS QQL+DCD   + GC+GG M DA  Y++ N G+ S+  Y Y+ S+ 
Sbjct: 165 GVAKIAGGNLVSLSEQQLLDCDREYDRGCDGGIMSDAFNYVVQNRGIASENDYSYQGSDG 224

Query: 390 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVID 447
             GC          ++  +  +P   E  + + V +R P+SV M+A  +G  +YSGGV D
Sbjct: 225 --GCRSNARPA--ARISGFQTVPSNNERALLEAV-SRQPVSVSMDATGDGFMHYSGGVYD 279

Query: 448 ------LNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
                  N  +    YGTS     YW+ KNSWG  WGEK
Sbjct: 280 GPCGTSSNHAVTFVGYGTSQDGTKYWLAKNSWGETWGEK 318



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 16/158 (10%)

Query: 498 LSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           L  L+ ++L+DCD   + GC+GG M DA  Y++ N G+ S+  Y Y+ S+   GC     
Sbjct: 174 LVSLSEQQLLDCDREYDRGCDGGIMSDAFNYVVQNRGIASENDYSYQGSDG--GCRSNAR 231

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCNPK 614
                ++  +  +P   E  + + V +R P+SV M+A  +G  +YSGGV D     C   
Sbjct: 232 PA--ARISGFQTVPSNNERALLEAV-SRQPVSVSMDATGDGFMHYSGGVYD---GPCGT- 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           + NHA+  VGYG  +  DGT   YW+ KNSWG  WGEK
Sbjct: 285 SSNHAVTFVGYGTSQ--DGTK--YWLAKNSWGETWGEK 318



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 20/182 (10%)

Query: 20  FMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           F I  A   + IF+ +  ++        F R++      +E  +RR + F  N++  E++
Sbjct: 18  FRISQATSRTVIFREQSMVDKHEQWMARFSREYR---DELEKNMRR-DVFKKNLKFIENF 73

Query: 80  QREDSGTAVFEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQPS-LQAPFSSNQTDTEMRAF 137
            ++ + +    VN+F D ++ +   + TGL     L ++ PS + A   S+QT       
Sbjct: 74  NKKGNKSYKLGVNEFADWTNEEFLAIHTGLK---GLTEVSPSKVVAKTISSQT------- 123

Query: 138 QFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSV 197
                   D + E+ DWRAEG ++ VK QG+C CCWAFSAV  VE +  I G NL  LS 
Sbjct: 124 ----WNVSDMVVESKDWRAEGAVTPVKYQGQCGCCWAFSAVAAVEGVAKIAGGNLVSLSE 179

Query: 198 QH 199
           Q 
Sbjct: 180 QQ 181


>gi|260516654|gb|ACX43954.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516656|gb|ACX43955.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516658|gb|ACX43956.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516660|gb|ACX43957.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516662|gb|ACX43958.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516664|gb|ACX43959.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516666|gb|ACX43960.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516668|gb|ACX43961.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516670|gb|ACX43962.1| cysteine protease 2 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 146/294 (49%), Gaps = 43/294 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ + K YS  E    R   F  NVE    + +  + +   G+N+F DLS    ++  G 
Sbjct: 46  MKQYSKAYSHAE-FSSRFNQFKANVETIRLHNTLANASYTMGLNEFADLS---FEEFKGK 101

Query: 257 NLDSTLEDIQPSLQAPFS-SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
                       ++  F+ SN    E+ A            P + DWR    ++ +K+QG
Sbjct: 102 YFG------YKHVEREFARSNNLHQEVEA-----------APTSIDWRTSNAVTPIKDQG 144

Query: 316 KCACCWAFSAVGVVEAMHAIQG-NSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIID 372
           +C  CWAFSA G +E    +QG ++LT LS QQLVDC  S  N GCNGG MD A +YII 
Sbjct: 145 QCGSCWAFSATGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGNAGCNGGLMDYAFEYIIA 204

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           N G+ ++ AYPYK      G L  +     V +  Y  +  G+E  +   V T GP+SV 
Sbjct: 205 NKGICAESAYPYKG----VGGLCQKSCTKVVTISGYKDVASGDEASLLNAVGTVGPVSVA 260

Query: 433 MNAN--GLFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           + A+  G  +YS GV       +L+  +    YGT  S  YWIVKNSWG+ WGE
Sbjct: 261 IEADQAGFQFYSSGVFSGTCGHNLDHGVLAVGYGTTGSQDYWIVKNSWGTSWGE 314



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 91/173 (52%), Gaps = 19/173 (10%)

Query: 485 TRDLELTGVLPSK--LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAY 540
           T  +E   VL  K  L+ L+ ++LVDC  S  N GCNGG MD A +YII N G+ ++ AY
Sbjct: 155 TGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGNAGCNGGLMDYAFEYIIANKGICAESAY 214

Query: 541 PYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFY 598
           PYK      G L  +     V +  Y  +  G+E  +   V T GP+SV + A+  G  +
Sbjct: 215 PYKG----VGGLCQKSCTKVVTISGYKDVASGDEASLLNAVGTVGPVSVAIEADQAGFQF 270

Query: 599 YSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           YS GV       C     +H ++ VGYG    +D     YWIVKNSWG+ WGE
Sbjct: 271 YSSGVFS---GTCGHNL-DHGVLAVGYGTTGSQD-----YWIVKNSWGTSWGE 314



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 23/157 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  FM+ + K YS  E    R   F  NVE    +    + +    +N+F DLS    ++
Sbjct: 42  FTAFMKQYSKAYSHAE-FSSRFNQFKANVETIRLHNTLANASYTMGLNEFADLS---FEE 97

Query: 105 LTGLNLDSTLEDIQPSLQAPFS-SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             G             ++  F+ SN    E+ A            P + DWR    ++ +
Sbjct: 98  FKGKYFG------YKHVEREFARSNNLHQEVEA-----------APTSIDWRTSNAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQG-NNLTELSVQH 199
           K+QG+C  CWAFSA G +E    +QG + LT LS Q 
Sbjct: 141 KDQGQCGSCWAFSATGSIEGAWVLQGKHTLTSLSEQQ 177


>gi|116309130|emb|CAH66233.1| H0825G02.10 [Oryza sativa Indica Group]
          Length = 339

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 156/314 (49%), Gaps = 53/314 (16%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ + +VY    +  RR E F  NV   E + +        G +KF+ LS +    LT  
Sbjct: 41  MEQYGRVYKDATEKARRFEIFKANVAFIESFNA--------GNHKFW-LSVNQFADLTNY 91

Query: 257 NLDSTLED---IQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
              +T  +   I  +++ P +          F++ ++   D LP   DWR +G ++ +K+
Sbjct: 92  EFRATKTNKGFIPSTVRVPTT----------FRYENVSI-DTLPATVDWRTKGAVTPIKD 140

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYII 371
           QG+C CCWAFSAV  +E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II
Sbjct: 141 QGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFII 200

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
            NGG+ ++  YPY A++ +  C  G        +K Y  +P   E  + K VA + P+SV
Sbjct: 201 KNGGLTTESKYPYTAADGK--CNGGSNSA--ATIKGYEDVPANNEAALMKAVANQ-PVSV 255

Query: 432 GMNANGLF--YYSGGVI------DLNQRLY-------GTSIPYWIVKNSWGSDWGEK--- 473
            ++   +   +YSGGV+      DL+  +        G    YW++KNSWG+ WGE    
Sbjct: 256 AVDGGDMTFQFYSGGVMTGSCGTDLDHGIVAIGYGKDGDGTQYWLLKNSWGTTWGENGFL 315

Query: 474 -----VEDKVGSSG 482
                + DK G  G
Sbjct: 316 RMEKDISDKRGMCG 329



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+ ++  YPY A++ +  C  G
Sbjct: 166 KLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTESKYPYTAADGK--CNGG 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P   E  + K VA + P+SV ++   +   +YSGGV+  +   C 
Sbjct: 224 SNSA--ATIKGYEDVPANNEAALMKAVANQ-PVSVAVDGGDMTFQFYSGGVMTGS---CG 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H ++ +GYG    KDG    YW++KNSWG+ WGE   L
Sbjct: 278 TDL-DHGIVAIGYG----KDGDGTQYWLLKNSWGTTWGENGFL 315



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 23/160 (14%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF--EVNKFFDLSD 99
           V R   +M  + +VY    +  RR E F  NV   E +   ++G   F   VN+F DL++
Sbjct: 34  VARHERWMEQYGRVYKDATEKARRFEIFKANVAFIESF---NAGNHKFWLSVNQFADLTN 90

Query: 100 SDLQQLTGLNLDSTLEDIQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 158
            + +         T +   PS ++ P +          F++ ++   D LP   DWR +G
Sbjct: 91  YEFRAT------KTNKGFIPSTVRVPTT----------FRYENVSI-DTLPATVDWRTKG 133

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            ++ +K+QG+C CCWAFSAV  +E +  +    L  LS Q
Sbjct: 134 AVTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQ 173


>gi|359806140|ref|NP_001241450.1| uncharacterized protein LOC100778716 precursor [Glycine max]
 gi|255639509|gb|ACU20049.1| unknown [Glycine max]
          Length = 366

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 149/317 (47%), Gaps = 62/317 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R   F  N+ +A+ +Q  D  +AV GV +F DL+
Sbjct: 45  LNAEHHFSAFKTKFGKTYATQEEHDHRFRIFKNNLLRAKSHQKLDP-SAVHGVTRFSDLT 103

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
            ++ + Q  GL       D Q   +AP                     +DLP  FDWR  
Sbjct: 104 PAEFRRQFLGLKPLRLPSDAQ---KAPILPT-----------------NDLPTDFDWREH 143

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNG 356
           G ++ VK QG C  CW+FSAVG +E  H +    L  LS QQLVDCD           + 
Sbjct: 144 GAVTGVKNQGSCGSCWSFSAVGALEGAHFLSTGELVSLSEQQLVDCDHECDPEERGACDS 203

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M  A +Y +  GG++ ++ YPY     +RG    ++      V  +S +   +E
Sbjct: 204 GCNGGLMTTAFEYTLQAGGLMREKDYPYTG--RDRGPCKFDKSKVAASVANFSVVSL-DE 260

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV---------IDLNQRL--YGTSI-------- 457
           E++   +   GPL+VG+NA  +  Y GGV         +D    L  YG+          
Sbjct: 261 EQIAANLVQNGPLAVGINAVFMQTYIGGVSCPYICGKHLDHGVLLVGYGSGAYAPIRFKE 320

Query: 458 -PYWIVKNSWGSDWGEK 473
            PYWI+KNSWG  WGE+
Sbjct: 321 KPYWIIKNSWGESWGEE 337



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 29/173 (16%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M  A +Y +  GG++ ++ YPY   + 
Sbjct: 177 ELVSLSEQQLVDCDHECDPEERGACDSGCNGGLMTTAFEYTLQAGGLMREKDYPYTGRD- 235

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
            RG    ++      V  +S +   +EE++   +   GPL+VG+NA  +  Y GGV    
Sbjct: 236 -RGPCKFDKSKVAASVANFSVVSL-DEEQIAANLVQNGPLAVGINAVFMQTYIGGVS--C 291

Query: 608 QRLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGEK 652
             +C  K  +H +++VGYG         +EK      PYWI+KNSWG  WGE+
Sbjct: 292 PYICG-KHLDHGVLLVGYGSGAYAPIRFKEK------PYWIIKNSWGESWGEE 337



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 22/156 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F     K Y++ E+   R   F  N+ +A+ +Q+ D  +AV  V +F DL+ ++ +
Sbjct: 50  HFSAFKTKFGKTYATQEEHDHRFRIFKNNLLRAKSHQKLDP-SAVHGVTRFSDLTPAEFR 108

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  GL       D Q   +AP                     +DLP  FDWR  G ++ 
Sbjct: 109 RQFLGLKPLRLPSDAQ---KAPILPT-----------------NDLPTDFDWREHGAVTG 148

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CW+FSAVG +E  H +    L  LS Q
Sbjct: 149 VKNQGSCGSCWSFSAVGALEGAHFLSTGELVSLSEQ 184


>gi|224081756|ref|XP_002306486.1| predicted protein [Populus trichocarpa]
 gi|222855935|gb|EEE93482.1| predicted protein [Populus trichocarpa]
          Length = 352

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 163/301 (54%), Gaps = 36/301 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+ + +   R E F  N+   +++ S++  T   G+ KF DL+  + + +      
Sbjct: 11  HGKAYNGLGEEAERFEIFKNNLRFIDEHNSQNH-TYKVGLTKFADLTNEEYRAM----FL 65

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
            T  D +  L      +++ +E  AF     + GD LPE+ DWRA+G ++ +K+QG C  
Sbjct: 66  GTRSDAKRRLM----KSKSPSERYAF-----KAGDKLPESVDWRAKGAVNPIKDQGSCGS 116

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS V  VE ++ I    L  LS Q+LVDCD + N GCNGG MD A Q+II+NGG+ +
Sbjct: 117 CWAFSTVAAVEGINQIVTGELISLSEQELVDCDRTYNAGCNGGLMDYAFQFIINNGGLDT 176

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           ++ YPY   + +      + +   +   E   +PY +E+ ++K VA + P+SV + A+G+
Sbjct: 177 EKDYPYVGDDDKCDKDKMKTKAVSIDGFE-DVLPY-DEKALQKAVAHQ-PVSVAIEASGM 233

Query: 439 ---FYYS-------GGVIDLNQRLYGTS----IPYWIVKNSWGSDWGE----KVEDKVGS 480
              FY S       G  +D    + G +    + YW+V+NSWG++WGE    K++  VG 
Sbjct: 234 ALQFYQSGVFTGECGTALDHGVVVVGYASENGLDYWLVRNSWGTEWGEHGYIKMQRNVGD 293

Query: 481 S 481
           +
Sbjct: 294 T 294



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 95/162 (58%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  +L  L+ ++LVDCD + N GCNGG MD A Q+II+NGG+ +++ YPY   + +   
Sbjct: 132 IVTGELISLSEQELVDCDRTYNAGCNGGLMDYAFQFIINNGGLDTEKDYPYVGDDDKCDK 191

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              + +   +   E   +PY +E+ ++K VA + P+SV + A+G  L +Y  GV      
Sbjct: 192 DKMKTKAVSIDGFE-DVLPY-DEKALQKAVAHQ-PVSVAIEASGMALQFYQSGVFTGE-- 246

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +++VGY  E   D     YW+V+NSWG++WGE
Sbjct: 247 -CGT-ALDHGVVVVGYASENGLD-----YWLVRNSWGTEWGE 281



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 14/151 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K Y+ + +   R E F  N+   +++  ++  T    + KF DL++ + + +  
Sbjct: 7   WLAKHGKAYNGLGEEAERFEIFKNNLRFIDEHNSQNH-TYKVGLTKFADLTNEEYRAM-- 63

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                T  D +  L      +++ +E  AF     + GD LPE+ DWRA+G ++ +K+QG
Sbjct: 64  --FLGTRSDAKRRLM----KSKSPSERYAF-----KAGDKLPESVDWRAKGAVNPIKDQG 112

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS V  VE ++ I    L  LS Q
Sbjct: 113 SCGSCWAFSTVAAVEGINQIVTGELISLSEQ 143


>gi|374713651|gb|AEZ65083.1| cysteine protease [Carica papaya]
          Length = 467

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 154/297 (51%), Gaps = 34/297 (11%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           + E  +  H K Y+++ +  +R   F  N+   +++ S++  T   G+N+F DL+  + +
Sbjct: 48  MYEAWLVKHGKAYNALGEKEKRFGIFKDNLRFIDEHNSQNL-TYRLGLNRFADLTNEEYR 106

Query: 252 QL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            +  G+               P ++  T    R     + R GD LP+  DWR EG +  
Sbjct: 107 SMYLGVK--------------PGATRVTRKVSRKSDRFAARVGDALPDFIDWRKEGAVVG 152

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK+QG C  CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++
Sbjct: 153 VKDQGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEF 212

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           II+NGG+ S++ YPY+A++ +  C    +    V +  Y  +P  +E  +KK VA + P+
Sbjct: 213 IINNGGIDSEEDYPYRAADQK--CDQYRKNANVVSIDGYEDVPENDEAALKKAVAKQ-PV 269

Query: 430 SVGMNANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           SV + A G  +  Y  GV        L+  +    YGT     YWIV NSWG +WGE
Sbjct: 270 SVAIEAGGRAFQLYQSGVFTGKCGTSLDHGVAAVGYGTENGQDYWIVGNSWGKNWGE 326



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPY+A++ +  C
Sbjct: 177 IVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYRAADQK--C 234

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P  +E  +KK VA + P+SV + A G  +  Y  GV      
Sbjct: 235 DQYRKNANVVSIDGYEDVPENDEAALKKAVAKQ-PVSVAIEAGGRAFQLYQSGVFTGK-- 291

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   + +H +  VGYG E  +D     YWIV NSWG +WGE
Sbjct: 292 -CG-TSLDHGVAAVGYGTENGQD-----YWIVGNSWGKNWGE 326



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 16/152 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL-T 106
           ++  H K Y+++ +  +R   F  N+   +++  ++  T    +N+F DL++ + + +  
Sbjct: 52  WLVKHGKAYNALGEKEKRFGIFKDNLRFIDEHNSQNL-TYRLGLNRFADLTNEEYRSMYL 110

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           G+               P ++  T    R     + R GD LP+  DWR EG +  VK+Q
Sbjct: 111 GVK--------------PGATRVTRKVSRKSDRFAARVGDALPDFIDWRKEGAVVGVKDQ 156

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G C  CWAFS +  VE ++ I   +L  LS Q
Sbjct: 157 GSCGSCWAFSTIAAVEGINQIVTGDLISLSEQ 188


>gi|356515086|ref|XP_003526232.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 143/294 (48%), Gaps = 37/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + KVY   ++  +R   F  NV   E + +  + +   G+N+F DL+  +       
Sbjct: 43  MTRYGKVYKDPQEREKRFRVFKENVNYIEAFNNAANKSYKLGINQFADLTNKEF------ 96

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                   I P  +  F  +   + +R   F    +    P   DWR +G ++ +K+QG+
Sbjct: 97  --------IAP--RNGFKGHMCSSIIRTTTFK-FENVTATPSTVDWRQKGAVTPIKDQGQ 145

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV   E +HA+    L  LS Q+LVDCD    + GC GG MDDA ++II N 
Sbjct: 146 CGCCWAFSAVAATEGIHALSAGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNH 205

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPYK  + +  C   E       +  Y  +P   E  ++K VA + P+SV ++
Sbjct: 206 GLNTEANYPYKGVDGK--CNANEAAKNAATITGYEDVPANNEMALQKAVANQ-PVSVAID 262

Query: 435 ANG---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           A+G    FY SG            GV  +   +      YW+VKNSWG++WGE+
Sbjct: 263 ASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSDDGTEYWLVKNSWGTEWGEE 316



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG MDDA ++II N G+ ++  YPYK  + +  C   
Sbjct: 168 KLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEANYPYKGVDGK--CNAN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           E       +  Y  +P   E  ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 226 EAAKNAATITGYEDVPANNEMALQKAVANQ-PVSVAIDASGSDFQFYKSGVFTGS---CG 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG  +  DGT   YW+VKNSWG++WGE+
Sbjct: 282 TEL-DHGVTAVGYGVSD--DGTE--YWLVKNSWGTEWGEE 316



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY   ++  +R   F  NV   E +    + +    +N+F DL++ +  
Sbjct: 38  RHEQWMTRYGKVYKDPQEREKRFRVFKENVNYIEAFNNAANKSYKLGINQFADLTNKEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +  F  +   + +R   F    +    P   DWR +G ++ +
Sbjct: 97  -------------IAP--RNGFKGHMCSSIIRTTTFK-FENVTATPSTVDWRQKGAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +HA+    L  LS Q
Sbjct: 141 KDQGQCGCCWAFSAVAATEGIHALSAGKLISLSEQ 175


>gi|66803062|ref|XP_635374.1| cysteine protease [Dictyostelium discoideum AX4]
 gi|60463697|gb|EAL61879.1| cysteine protease [Dictyostelium discoideum AX4]
          Length = 352

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 156/326 (47%), Gaps = 67/326 (20%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEK--AEDYQSEDSGTAV-FGVNKFFDLSESDLQQLTGL 256
           ++K+YS+ E+ L + E F +N+    A + Q+   G+   FGVNKF DLS+ + ++    
Sbjct: 34  YNKIYSA-EEYLVKFETFKSNLLNIDALNKQATTIGSDTKFGVNKFADLSKEEFKKYYLS 92

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG---------V 307
           + ++ L D  P L      N +D  + A            P AFDWR  G          
Sbjct: 93  SKEARLTDDLPML-----PNLSDDIISA-----------TPAAFDWRNTGGSTKFPQGTP 136

Query: 308 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----------MSNGG 357
           ++ VK QG+C  CW+FS  G VE  H +   +L  LS Q LVDCD          + N G
Sbjct: 137 VTAVKNQGQCGSCWSFSTTGNVEGQHYLSTGTLVGLSEQNLVDCDHTCMTYENENVCNAG 196

Query: 358 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 417
           C+GG   +A  YII NGG+ ++  YPY A + E  C     +    K+  ++ +P   E 
Sbjct: 197 CDGGLQPNAYNYIIKNGGIQTEATYPYTAVDGE--CKFNSAQ-VGAKISSFTMVPQ-NET 252

Query: 418 EMKKWVATRGPLSVGMNANGLFYYSGGVIDL-----------------NQRLYGTSIPYW 460
           ++  ++   GPL++  +A    +Y GGV D                     + G + PYW
Sbjct: 253 QIASYLFNNGPLAIAADAEEWQFYMGGVFDFPCGQTLDHGILIVGYGAQDTIVGKNTPYW 312

Query: 461 IVKNSWGSDWGE----KVE---DKVG 479
           I+KNSWG+DWGE    KVE   DK G
Sbjct: 313 IIKNSWGADWGEAGYLKVERNTDKCG 338



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 22/170 (12%)

Query: 498 LSRLATEKLVDCD----------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           L  L+ + LVDCD          + N GC+GG   +A  YII NGG+ ++  YPY A + 
Sbjct: 169 LVGLSEQNLVDCDHTCMTYENENVCNAGCDGGLQPNAYNYIIKNGGIQTEATYPYTAVDG 228

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           E  C     +    K+  ++ +P   E ++  ++   GPL++  +A    +Y GGV D  
Sbjct: 229 E--CKFNSAQ-VGAKISSFTMVPQ-NETQIASYLFNNGPLAIAADAEEWQFYMGGVFDF- 283

Query: 608 QRLCNPKAQ--NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
                P  Q  +H ++IVGYG ++   G + PYWI+KNSWG+DWGE   L
Sbjct: 284 -----PCGQTLDHGILIVGYGAQDTIVGKNTPYWIIKNSWGADWGEAGYL 328



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 29/169 (17%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAV---FEVNKFFDLSD 99
           ++F+ F   ++K+YS+ E+ L + E F +N+   +   ++ +       F VNKF DLS 
Sbjct: 25  SQFIAFQNKYNKIYSA-EEYLVKFETFKSNLLNIDALNKQATTIGSDTKFGVNKFADLSK 83

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG- 158
            + ++    + ++ L D  P L      N +D  + A            P AFDWR  G 
Sbjct: 84  EEFKKYYLSSKEARLTDDLPML-----PNLSDDIISA-----------TPAAFDWRNTGG 127

Query: 159 --------VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
                    ++ VK QG+C  CW+FS  G VE  H +    L  LS Q+
Sbjct: 128 STKFPQGTPVTAVKNQGQCGSCWSFSTTGNVEGQHYLSTGTLVGLSEQN 176


>gi|302790828|ref|XP_002977181.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
 gi|300155157|gb|EFJ21790.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
          Length = 337

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 163/336 (48%), Gaps = 54/336 (16%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A  +A +    +E   A++  N+ E     H K YSS  +  RR   F   +   E + +
Sbjct: 14  ATPFAIARPAALEDGRALEIKNMFEDWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNA 73

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
           + + T   G+NKF DL+ ++ + +            +P  Q    +   D ++ +     
Sbjct: 74  QPNTTFTLGLNKFSDLTNAEFRAMHVGKFK------RPRYQDRLPAEDEDVDVSS----- 122

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                 LP + DWR +G ++ +K+QG C  CWAFSA+  +E+ H +    L  LS QQL+
Sbjct: 123 ------LPTSLDWRQKGAVTPIKDQGDCGSCWAFSAIASIESAHFLATKELVSLSEQQLM 176

Query: 350 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKAS-----ESERGCLVGEEEGFKVK 404
           DCD  + GC+GG M+ A ++++ NGGV ++ AYPY  S      ++    V E  GFKV 
Sbjct: 177 DCDTVDAGCDGGLMETAFKFVVKNGGVTTEAAYPYTGSVGSCNANKAKNKVAEITGFKVV 236

Query: 405 VKEYSRIPYGEEEEMKKWVATRGPLSV---GMNANGLFYYSG------------GVIDLN 449
            ++ +      +  MK    ++ P++V   G + N   Y SG            GV+ + 
Sbjct: 237 TEDSA------DALMK--AVSKTPVTVSICGSDENFQNYKSGILSGKCDDSLDHGVLLIG 288

Query: 450 QRLYGT--SIPYWIVKNSWGSDWGE----KVEDKVG 479
              YGT   +PYWI+KNSWG+ WGE    K+E K G
Sbjct: 289 ---YGTEGGMPYWIIKNSWGTSWGEDGFMKIERKDG 321



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 20/160 (12%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKAS-----ESERGC 551
           +L  L+ ++L+DCD  + GC+GG M+ A ++++ NGGV ++ AYPY  S      ++   
Sbjct: 166 ELVSLSEQQLMDCDTVDAGCDGGLMETAFKFVVKNGGVTTEAAYPYTGSVGSCNANKAKN 225

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLC 611
            V E  GFKV  ++ +      +  MK    T   +S+  +      Y  G++      C
Sbjct: 226 KVAEITGFKVVTEDSA------DALMKAVSKTPVTVSICGSDENFQNYKSGIL---SGKC 276

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +  + +H ++++GYG E       +PYWI+KNSWG+ WGE
Sbjct: 277 D-DSLDHGVLLIGYGTE-----GGMPYWIIKNSWGTSWGE 310



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 17/155 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F ++   H K YSS  +  RR   F   +   E +  + + T    +NKF DL++++ + 
Sbjct: 37  FEDWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRA 96

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +            +P  Q    +   D ++ +           LP + DWR +G ++ +K
Sbjct: 97  MHVGKFK------RPRYQDRLPAEDEDVDVSS-----------LPTSLDWRQKGAVTPIK 139

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +QG C  CWAFSA+  +E+ H +    L  LS Q 
Sbjct: 140 DQGDCGSCWAFSAIASIESAHFLATKELVSLSEQQ 174


>gi|9630063|ref|NP_046281.1| cathepsin [Orgyia pseudotsugata MNPV]
 gi|2499880|sp|O10364.1|CATV_NPVOP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|7435821|pir||T10394 cathepsin - Orgyia pseudotsugata nuclear polyhedrosis virus
 gi|1911371|gb|AAC59124.1| cathepsin [Orgyia pseudotsugata MNPV]
          Length = 324

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 160/327 (48%), Gaps = 41/327 (12%)

Query: 177 AVGVVEA--MHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGT 234
             GVV A     ++  N  E  +   +K YSS  + L R + F  N+E+  +    DS T
Sbjct: 10  VCGVVHAATYDLLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDS-T 68

Query: 235 AVFGVNKFFDLS-ESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG 293
           A + +NKF DLS E  + + TGL+L                 +QT         +  R  
Sbjct: 69  AQYEINKFSDLSKEEAISKYTGLSL----------------PHQTQNFCEVVILD--RPP 110

Query: 294 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM 353
           D  P  FDWR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS QQ +DCD 
Sbjct: 111 DRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR 170

Query: 354 SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY 413
            N GC+GG +  A +  ++ GGV  +  YPY+ +  +  C +     F V V+   R   
Sbjct: 171 VNAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQ--CRINPNR-FVVGVRSCRRYIV 227

Query: 414 GEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYWI 461
             EE++K  +   GP+ V ++A+ +  Y  G++       LN  +    Y    +IPYWI
Sbjct: 228 MFEEKLKDLLRAVGPIPVAIDASDIVNYRRGIMRQCANHGLNHAVLLVGYAVENNIPYWI 287

Query: 462 VKNSWGSDWGE----KVEDKVGSSGNR 484
           +KN+WG+DWGE    +V+  + + G R
Sbjct: 288 LKNTWGTDWGEDGYFRVQQNINACGIR 314



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++ +DCD  N GC+GG +  A +  ++ GGV  +  YPY+ +  +  C +  
Sbjct: 155 NRLINLSEQQFIDCDRVNAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQ--CRINP 212

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
              F V V+   R     EE++K  +   GP+ V ++A+ +  Y  G++    R C    
Sbjct: 213 NR-FVVGVRSCRRYIVMFEEKLKDLLRAVGPIPVAIDASDIVNYRRGIM----RQCANHG 267

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGY  E      +IPYWI+KN+WG+DWGE
Sbjct: 268 LNHAVLLVGYAVE-----NNIPYWILKNTWGTDWGE 298



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 23/181 (12%)

Query: 22  IKVALLESNIFQTRGY--LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           I + LL   +     Y  L +P   F +F+   +K YSS  + L R + F  N+E+  + 
Sbjct: 4   IMLCLLVCGVVHAATYDLLKAP-NYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINK 62

Query: 80  QREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
            + DS TA +E+NKF DLS  + + + TGL+L                 +QT        
Sbjct: 63  NQNDS-TAQYEINKFSDLSKEEAISKYTGLSL----------------PHQTQNFCEVVI 105

Query: 139 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +  R  D  P  FDWR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS Q
Sbjct: 106 LD--RPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQ 163

Query: 199 H 199
            
Sbjct: 164 Q 164


>gi|111073715|dbj|BAF02546.1| triticain alpha [Triticum aestivum]
 gi|388890585|gb|AFK80346.1| cysteine endopeptidase EP alpha [Secale cereale x Triticum durum]
          Length = 461

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 155/294 (52%), Gaps = 38/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQL 253
           +  H + Y+++ +  RR E F  N+   + + +  D+G   F  G+N+F DL+  + +  
Sbjct: 45  MSEHRRTYNAIGEEERRFEVFRDNLRYIDQHNAAADAGLHSFRLGLNRFADLTNEEYRS- 103

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
           T L    T  D +  L A + ++  +               +LPE  DWR +G ++ +K+
Sbjct: 104 TYLGA-RTKPDRERKLSARYQADDNE---------------ELPETVDWRKKGAVAAIKD 147

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIID 372
           QG C  CWAFSA+  VE ++ I    +  LS Q+LVDCD S N GCNGG MD A ++II+
Sbjct: 148 QGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDTSYNEGCNGGLMDYAFEFIIN 207

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S++ YPYK  E +  C   ++    V +  Y  +P   E+ ++K VA + P+SV 
Sbjct: 208 NGGIDSEEDYPYK--ERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQ-PISVA 264

Query: 433 MNANGLFY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           + A G  +  Y  G+        L+  +    YGT     YW+V+NSWG+ WGE
Sbjct: 265 IEAGGRAFQLYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGTVWGE 318



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   +  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPYK  E +  C
Sbjct: 169 IVTGDMIPLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYK--ERDNRC 226

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
              ++    V +  Y  +P   E+ ++K VA + P+SV + A G  +  Y  G+      
Sbjct: 227 DANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQ-PISVAIEAGGRAFQLYKSGIF---TG 282

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YW+V+NSWG+ WGE
Sbjct: 283 TCG-TALDHGVAAVGYGTENGKD-----YWLVRNSWGTVWGE 318



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 20/157 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +M +H + Y+++ +  RR E F  N+   + +    D+G   F +  N+F DL++ +
Sbjct: 41  YAEWMSEHRRTYNAIGEEERRFEVFRDNLRYIDQHNAAADAGLHSFRLGLNRFADLTNEE 100

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +  T L    T  D +  L A + ++  +               +LPE  DWR +G ++
Sbjct: 101 YRS-TYLGA-RTKPDRERKLSARYQADDNE---------------ELPETVDWRKKGAVA 143

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +K+QG C  CWAFSA+  VE ++ I   ++  LS Q
Sbjct: 144 AIKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQ 180


>gi|320164780|gb|EFW41679.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 144/289 (49%), Gaps = 36/289 (12%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           K YS   + + R   +  N    + +      +   G+N F DL+  + ++     L + 
Sbjct: 39  KSYSDAVEEINRRAVWEANKMLVDAHNGAGIHSYTLGMNIFADLTHEEFKRFY---LGTK 95

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
           ++  +P  ++ FSS           F    +   LP++ DWR  G+++ VK+QG+C  CW
Sbjct: 96  VDLNRP--RSNFSST----------FIPTANVGALPDSVDWRTAGIVTPVKDQGQCGSCW 143

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSD 379
           +FS  G VE  HA +   L  LS Q LVDC  + G  GCNGG MDDA QYII N G+ ++
Sbjct: 144 SFSTTGSVEGQHARKTGQLVSLSEQNLVDCSKAQGNQGCNGGLMDDAFQYIITNKGIDTE 203

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NG 437
            +YPY A +   G            +  +  I  G E +++  VAT GP+SV ++A  N 
Sbjct: 204 ASYPYTAKD---GTCKFNAANVGATLSSFQDITRGSESDLQNAVATVGPVSVAIDASKNS 260

Query: 438 LFYYSGGVID--------LNQRL----YGTS--IPYWIVKNSWGSDWGE 472
              Y+ GV +        L+  +    YGTS   PYW+VKNSWGS WG+
Sbjct: 261 FQLYTSGVYNEKKCSSTSLDHGVLAAGYGTSNGTPYWLVKNSWGSSWGQ 309



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 90/159 (56%), Gaps = 14/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           +L  L+ + LVDC  + G  GCNGG MDDA QYII N G+ ++ +YPY A +   G    
Sbjct: 161 QLVSLSEQNLVDCSKAQGNQGCNGGLMDDAFQYIITNKGIDTEASYPYTAKD---GTCKF 217

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
                   +  +  I  G E +++  VAT GP+SV ++A  N    Y+ GV   N++ C+
Sbjct: 218 NAANVGATLSSFQDITRGSESDLQNAVATVGPVSVAIDASKNSFQLYTSGV--YNEKKCS 275

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             + +H ++  GYG     +GT  PYW+VKNSWGS WG+
Sbjct: 276 STSLDHGVLAAGYGTS---NGT--PYWLVKNSWGSSWGQ 309



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR  G+++ VK+QG+C  CW+FS  G VE  HA +   L  LS Q+
Sbjct: 118 LPDSVDWRTAGIVTPVKDQGQCGSCWSFSTTGSVEGQHARKTGQLVSLSEQN 169


>gi|356543112|ref|XP_003540007.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 345

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 147/293 (50%), Gaps = 32/293 (10%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + KVY    +  +R + F  NV   E + +         +N+F DL + + + L   
Sbjct: 42  MAQYGKVYKDAAEKKKRFQIFKNNVHFIESFNTAGDKPFNLSINQFADLHDEEFKALL-T 100

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           N +  +  +  +         T+TE  +F++N +     L    DWR  G ++ +K+Q +
Sbjct: 101 NGNKKVRSVVGTA--------TETET-SFKYNRV---TKLLATMDWRKRGAVTPIKDQRR 148

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG-GCNGGRMDDALQYIIDNGG 375
           C  CWAFSAV  +E +H I  + L  LS Q+LVDC      GCNGG M+DA +++   GG
Sbjct: 149 CGSCWAFSAVAAIEGIHQITTSKLVSLSEQELVDCVKGESEGCNGGYMEDAFEFVAKKGG 208

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + S+  YPYK    ++ C V +E     ++K Y ++P   E+ ++K VA + P+SV + A
Sbjct: 209 IASESYYPYKG--KDKSCKVKKETHGVSQIKGYEKVPSNSEKALQKAVAHQ-PVSVYVEA 265

Query: 436 --NGLFYYSGGVID----------LNQRLYGTS---IPYWIVKNSWGSDWGEK 473
             N   +YS G+            +    YG S     YW+VKNSWG+ WGEK
Sbjct: 266 GGNAFQFYSSGIFTGKCGTNTDHAITVVGYGKSRGGTKYWLVKNSWGAGWGEK 318



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +  SKL  L+ ++LVDC      GCNGG M+DA +++   GG+ S+  YPYK    ++ C
Sbjct: 167 ITTSKLVSLSEQELVDCVKGESEGCNGGYMEDAFEFVAKKGGIASESYYPYKG--KDKSC 224

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQR 609
            V +E     ++K Y ++P   E+ ++K VA + P+SV + A  N   +YS G+      
Sbjct: 225 KVKKETHGVSQIKGYEKVPSNSEKALQKAVAHQ-PVSVYVEAGGNAFQFYSSGIFTGK-- 281

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +HA+ +VGYG+   + GT   YW+VKNSWG+ WGEK
Sbjct: 282 -CGTNT-DHAITVVGYGKS--RGGT--KYWLVKNSWGAGWGEK 318



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 13/170 (7%)

Query: 29  SNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAV 88
           S+I   R +      R  N+M  + KVY    +  +R + F  NV   E +         
Sbjct: 22  SHIMSRRLFEACTSERHENWMAQYGKVYKDAAEKKKRFQIFKNNVHFIESFNTAGDKPFN 81

Query: 89  FEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL 148
             +N+F DL D + + L   N +  +  +  +         T+TE  +F++N +     L
Sbjct: 82  LSINQFADLHDEEFKALL-TNGNKKVRSVVGTA--------TETET-SFKYNRV---TKL 128

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
               DWR  G ++ +K+Q +C  CWAFSAV  +E +H I  + L  LS Q
Sbjct: 129 LATMDWRKRGAVTPIKDQRRCGSCWAFSAVAAIEGIHQITTSKLVSLSEQ 178


>gi|40806500|gb|AAR92155.1| putative cysteine protease 2 [Iris x hollandica]
          Length = 359

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 149/290 (51%), Gaps = 34/290 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H  V   + +  +R   F  N +   ++  +D+   + G+NKF D++    Q+       
Sbjct: 46  HHTVSRDLSEKNKRFNVFKENAKFIHEFNKKDAPYKL-GLNKFADMTN---QEFRSTYAG 101

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S +   +     P ++        +F + ++     +P + DWR +G ++ VK+QG+C  
Sbjct: 102 SKIHHHRTQRGTPRATG-------SFMYENVH---SIPASVDWRTQGAVAPVKDQGQCGS 151

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS +  VE ++ I+ N L  LS QQLVDCD   N GCNGG MD A ++I  NGG+ S
Sbjct: 152 CWAFSTIASVEGINKIKTNQLVPLSGQQLVDCDTDQNEGCNGGLMDYAFEFIKSNGGITS 211

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           + AYPY A   E+G    E     V +  Y  +P   E  + K VA +  +SV + A+G+
Sbjct: 212 ESAYPYTA---EQGSCASESSAPVVTIDGYEDVPANNEAALMKAVANQ-VVSVAIEASGM 267

Query: 439 F--YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
              +YS GV       +L+  +    YG +     YWIV+NSWG++WGEK
Sbjct: 268 AFQFYSEGVFTGSCGNELDHGVAVVGYGATRDGTKYWIVRNSWGAEWGEK 317



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +  ++L  L+ ++LVDCD   N GCNGG MD A ++I  NGG+ S+ AYPY A   E
Sbjct: 164 INKIKTNQLVPLSGQQLVDCDTDQNEGCNGGLMDYAFEFIKSNGGITSESAYPYTA---E 220

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDL 606
           +G    E     V +  Y  +P   E  + K VA +  +SV + A+G+   +YS GV   
Sbjct: 221 QGSCASESSAPVVTIDGYEDVPANNEAALMKAVANQ-VVSVAIEASGMAFQFYSEGVFTG 279

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +   C  +  +H + +VGYG    +DGT   YWIV+NSWG++WGEK
Sbjct: 280 S---CGNEL-DHGVAVVGYG--ATRDGTK--YWIVRNSWGAEWGEK 317



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 14/150 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V   + +  +R   F  N +   ++ ++D+   +  +NKF D+++   Q+     
Sbjct: 44  RSHHTVSRDLSEKNKRFNVFKENAKFIHEFNKKDAPYKL-GLNKFADMTN---QEFRSTY 99

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             S +   +     P ++        +F + ++     +P + DWR +G ++ VK+QG+C
Sbjct: 100 AGSKIHHHRTQRGTPRATG-------SFMYENVH---SIPASVDWRTQGAVAPVKDQGQC 149

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
             CWAFS +  VE ++ I+ N L  LS Q 
Sbjct: 150 GSCWAFSTIASVEGINKIKTNQLVPLSGQQ 179


>gi|118120|sp|P25249.1|CYSP1_HORVU RecName: Full=Cysteine proteinase EP-B 1; Flags: Precursor
 gi|1146116|gb|AAA85035.1| cysteine proteinase EPB1 precursor [Hordeum vulgare subsp. vulgare]
          Length = 371

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 149/294 (50%), Gaps = 40/294 (13%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR   F +N      +           +N+F D+ +++ +     +L        PS+  
Sbjct: 64  RRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPG 123

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
                        F + +L +  DLP + DWR +G ++ VK+QGKC  CWAFS V  VE 
Sbjct: 124 -------------FMYAAL-NVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEG 169

Query: 332 MHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 390
           ++AI+  SL  LS Q+L+DCD + N GC GG MD+A +YI +NGG++++ AYPY+A+   
Sbjct: 170 INAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGT 229

Query: 391 RGCLV---GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV 445
             C V    +     V +  +  +P   EE++ + VA + P+SV + A+G    +YS GV
Sbjct: 230 --CNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQ-PVSVAVEASGKAFMFYSEGV 286

Query: 446 I--DLNQRL-YGTSI----------PYWIVKNSWGSDWGE----KVEDKVGSSG 482
              D    L +G ++           YW VKNSWG  WGE    +VE   G+SG
Sbjct: 287 FTGDCGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASG 340



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 21/171 (12%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +    L  L+ ++L+DCD + N GC GG MD+A +YI +NGG++++ AYPY+A+   
Sbjct: 170 INAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGT 229

Query: 549 RGCLV---GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV 603
             C V    +     V +  +  +P   EE++ + VA + P+SV + A+G    +YS GV
Sbjct: 230 --CNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQ-PVSVAVEASGKAFMFYSEGV 286

Query: 604 I--DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              D    L      +H + +VGYG  E  DG +  YW VKNSWG  WGE+
Sbjct: 287 FTGDCGTEL------DHGVAVVGYGVAE--DGKA--YWTVKNSWGPSWGEQ 327



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 14/135 (10%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           RR   F +N      + +         +N+F D+  ++ +     +L        PS+  
Sbjct: 64  RRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPG 123

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
                        F + +L +  DLP + DWR +G ++ VK+QGKC  CWAFS V  VE 
Sbjct: 124 -------------FMYAAL-NVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEG 169

Query: 184 MHAIQGNNLTELSVQ 198
           ++AI+  +L  LS Q
Sbjct: 170 INAIRTGSLVSLSEQ 184


>gi|356559055|ref|XP_003547817.1| PREDICTED: cysteine proteinase RD21a [Glycine max]
          Length = 366

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 151/294 (51%), Gaps = 43/294 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H KVY+ + +  +R + F  N+   +++ +  + T   G+N+F D++  + + +      
Sbjct: 47  HQKVYNGLREKDKRFQVFKDNLGFIQEHNNNQNNTYKLGLNQFADMTNEEYRVM------ 100

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH------GDDLPEAFDWRAEGVISKVKE 313
                        +   ++D + R  +  S  H      GD LP   DWR +G ++ +K+
Sbjct: 101 -------------YFGTKSDAKRRLMKTKSTGHRYAYSAGDRLPVHVDWRVKGAVAPIKD 147

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIID 372
           QG C  CWAFS V  VEA++ I       LS Q+LVDCD + N GCNGG MD A ++II 
Sbjct: 148 QGSCGSCWAFSTVATVEAINKIVTGKFVSLSEQELVDCDRAYNEGCNGGLMDYAFEFIIQ 207

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ +D+ YPY+  +    C   ++    V +  +  +P  +E  +KK VA + P+S+ 
Sbjct: 208 NGGIDTDKDYPYRGFDGI--CDPTKKNAKVVNIDGFEDVPPYDENALKKAVAHQ-PVSIA 264

Query: 433 MNANG--LFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           + A+G  L  Y  GV        L+  +    YG+   + YW+V+NSWG+ WGE
Sbjct: 265 IEASGRDLQLYQSGVFTGKCGTSLDHGVVVVGYGSENGVDYWLVRNSWGTGWGE 318



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  K   L+ ++LVDCD + N GCNGG MD A ++II NGG+ +D+ YPY+  +  
Sbjct: 166 INKIVTGKFVSLSEQELVDCDRAYNEGCNGGLMDYAFEFIIQNGGIDTDKDYPYRGFDGI 225

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C   ++    V +  +  +P  +E  +KK VA + P+S+ + A+G  L  Y  GV   
Sbjct: 226 --CDPTKKNAKVVNIDGFEDVPPYDENALKKAVAHQ-PVSIAIEASGRDLQLYQSGVF-- 280

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   + +H +++VGYG E   D     YW+V+NSWG+ WGE
Sbjct: 281 -TGKCGT-SLDHGVVVVGYGSENGVD-----YWLVRNSWGTGWGE 318



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 27/186 (14%)

Query: 19  TFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAED 78
           +F +  A+  S I  T    N  +T +  ++  H KVY+ + +  +R + F  N+   ++
Sbjct: 16  SFTLSCAIDTSTI--TNYTDNEVMTMYEEWLVKHQKVYNGLREKDKRFQVFKDNLGFIQE 73

Query: 79  YQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
           +    + T    +N+F D+++ + + +                   +   ++D + R  +
Sbjct: 74  HNNNQNNTYKLGLNQFADMTNEEYRVM-------------------YFGTKSDAKRRLMK 114

Query: 139 FNSLRH------GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNL 192
             S  H      GD LP   DWR +G ++ +K+QG C  CWAFS V  VEA++ I     
Sbjct: 115 TKSTGHRYAYSAGDRLPVHVDWRVKGAVAPIKDQGSCGSCWAFSTVATVEAINKIVTGKF 174

Query: 193 TELSVQ 198
             LS Q
Sbjct: 175 VSLSEQ 180


>gi|312091978|ref|XP_003147174.1| fibroinase [Loa loa]
 gi|307757661|gb|EFO16895.1| fibroinase [Loa loa]
          Length = 286

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/265 (36%), Positives = 132/265 (49%), Gaps = 30/265 (11%)

Query: 217 FVTNVEKA----EDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAP 272
           F+ NVEK     E Y+  +  T   G+NKF D+   + +++ G   +          Q  
Sbjct: 3   FLQNVEKIRQHNERYERGEE-TYKMGINKFADMLPEETKEVNGYRYEKK--------QLL 53

Query: 273 FSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAM 332
           F                L     LPE  DWR +G ++ VK+QG+C  CWAFS+ G +E  
Sbjct: 54  FGKKNVIL---------LSANSRLPEKVDWRIKGAVTPVKDQGRCGSCWAFSSTGALEGQ 104

Query: 333 HAIQGNSLTELSVQQLVDC--DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 390
           H  +   L  LS Q L+DC  D  N GC+GG MD A  YI +NGG+ S+ AYPY+A E  
Sbjct: 105 HYRRTGRLISLSEQNLLDCSEDYGNSGCSGGLMDYAFDYIKENGGIDSESAYPYEAKEGP 164

Query: 391 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN- 449
             C             E   +P G+E ++++ VA  GP+SV MNA  L  Y  G  +   
Sbjct: 165 --CRYSNRTRVSTDNGEVD-LPEGDEMQLQRAVAKIGPISVAMNARYLSSYEEGYGNEKV 221

Query: 450 QRLYGT--SIPYWIVKNSWGSDWGE 472
           +R  GT   + YWIVKNSWG DWGE
Sbjct: 222 KRENGTVEDLDYWIVKNSWGKDWGE 246



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 82/161 (50%), Gaps = 31/161 (19%)

Query: 497 KLSRLATEKLVDC--DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           +L  L+ + L+DC  D  N GC+GG MD A  YI +NGG+ S+ AYPY+A E    C   
Sbjct: 111 RLISLSEQNLLDCSEDYGNSGCSGGLMDYAFDYIKENGGIDSESAYPYEAKEGP--CRYS 168

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
                     E   +P G+E ++++ VA  GP+SV MNA  L  Y               
Sbjct: 169 NRTRVSTDNGEVD-LPEGDEMQLQRAVAKIGPISVAMNARYLSSYE-------------- 213

Query: 615 AQNHALIIVGYGEE--EKKDGT--SIPYWIVKNSWGSDWGE 651
                    GYG E  ++++GT   + YWIVKNSWG DWGE
Sbjct: 214 --------EGYGNEKVKRENGTVEDLDYWIVKNSWGKDWGE 246



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)

Query: 69  FVTNVEKAEDY-QREDSGTAVFE--VNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPF 125
           F+ NVEK   + +R + G   ++  +NKF D+   + +++ G   +          Q  F
Sbjct: 3   FLQNVEKIRQHNERYERGEETYKMGINKFADMLPEETKEVNGYRYEKK--------QLLF 54

Query: 126 SSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMH 185
                           L     LPE  DWR +G ++ VK+QG+C  CWAFS+ G +E  H
Sbjct: 55  GKKNVIL---------LSANSRLPEKVDWRIKGAVTPVKDQGRCGSCWAFSSTGALEGQH 105

Query: 186 AIQGNNLTELSVQH 199
             +   L  LS Q+
Sbjct: 106 YRRTGRLISLSEQN 119


>gi|344275470|ref|XP_003409535.1| PREDICTED: cathepsin S-like isoform 1 [Loxodonta africana]
          Length = 331

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/249 (38%), Positives = 136/249 (54%), Gaps = 32/249 (12%)

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
           +DLS + L  +T   + S +     SL+ P    +  T    F+ N       LP++ DW
Sbjct: 73  YDLSMNHLGDMTSEEVMSLMS----SLRVPSQWQRNVT----FKSNP---NQKLPDSLDW 121

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---MSNGGCN 359
           R +G ++ VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC     SN GCN
Sbjct: 122 REKGCVTDVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSGEKYSNKGCN 181

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG M  A QYIIDN G+ S+ +YPYKA++   G    + +       +Y+ +PYG E+ +
Sbjct: 182 GGFMTRAFQYIIDNNGIDSEASYPYKATD---GKCQYDPKNRAATCSKYTELPYGSEDAL 238

Query: 420 KKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSIPYWIVKN 464
           K+ VA +GP+SVG++A+    F Y  GV        ++N  +    YG      YW+VKN
Sbjct: 239 KEAVANKGPVSVGIDASRPSFFLYKSGVYYDPSCTDNVNHGVLVVGYGNLNGKDYWLVKN 298

Query: 465 SWGSDWGEK 473
           SWG ++GE+
Sbjct: 299 SWGLNFGEQ 307



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCD---MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC     SN GCNGG M  A QYIIDN G+ S+ +YPYKA++   G   
Sbjct: 158 KLVSLSAQNLVDCSGEKYSNKGCNGGFMTRAFQYIIDNNGIDSEASYPYKATD---GKCQ 214

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A+    F Y  GV       C
Sbjct: 215 YDPKNRAATCSKYTELPYGSEDALKEAVANKGPVSVGIDASRPSFFLYKSGVY--YDPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG    KD     YW+VKNSWG ++GE+
Sbjct: 273 TDNV-NHGVLVVGYGNLNGKD-----YWLVKNSWGLNFGEQ 307



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 11/105 (10%)

Query: 95  FDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 154
           +DLS + L  +T   + S +     SL+ P    +  T    F+ N       LP++ DW
Sbjct: 73  YDLSMNHLGDMTSEEVMSLMS----SLRVPSQWQRNVT----FKSNP---NQKLPDSLDW 121

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           R +G ++ VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 122 REKGCVTDVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 166


>gi|164605518|dbj|BAF98584.1| CM0216.500.nc [Lotus japonicus]
          Length = 360

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 150/319 (47%), Gaps = 68/319 (21%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L  +HH         KVY++ E+   R   F +N+ +A  +Q  D  +AV GV +F DL+
Sbjct: 39  LGAEHHFLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDP-SAVHGVTRFSDLT 97

Query: 247 ESDLQQ----LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
             + +     L G+ L S   D  P L                        D+LP+ FDW
Sbjct: 98  PMEFRHSVLGLRGVGLPSD-ADSAPILPT----------------------DNLPKDFDW 134

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--------- 353
           R  G ++ VK QG C  CW+FSA G +E  H +    L  LS QQLVDCD          
Sbjct: 135 REHGAVTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHQCDPEEAGS 194

Query: 354 SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY 413
            + GCNGG M+ A +YI++NGGV+ ++ YPY  +    G    ++      V  +S +  
Sbjct: 195 CDSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNG--GTCKFDKAKIAASVANFSVVSR 252

Query: 414 GEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI-------DLNQRL----YGT------- 455
            +E+++   +   GPL+V +NA  +  Y GGV         LN  +    YG+       
Sbjct: 253 -DEDQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYAPIR 311

Query: 456 --SIPYWIVKNSWGSDWGE 472
               PYWI+KNSWG +WGE
Sbjct: 312 MKQKPYWIIKNSWGENWGE 330



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 110/219 (50%), Gaps = 33/219 (15%)

Query: 447 DLNQRLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS-KLSRLAT 503
           D + R +G   P   VKN  S GS W          S + T  LE    L + +L  L+ 
Sbjct: 131 DFDWREHGAVTP---VKNQGSCGSCW----------SFSATGALEGAHFLSTGELVSLSE 177

Query: 504 EKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           ++LVDCD           + GCNGG M+ A +YI++NGGV+ ++ YPY  +    G    
Sbjct: 178 QQLVDCDHQCDPEEAGSCDSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNG--GTCKF 235

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           ++      V  +S +   +E+++   +   GPL+V +NA  +  Y GGV      +C+ K
Sbjct: 236 DKAKIAASVANFSVVSR-DEDQIAANLVKNGPLAVAINAVYMQTYVGGVS--CPYVCS-K 291

Query: 615 AQNHALIIVGYGEEEKKD--GTSIPYWIVKNSWGSDWGE 651
             NH +++VGYG E          PYWI+KNSWG +WGE
Sbjct: 292 KLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGENWGE 330



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 72/159 (45%), Gaps = 28/159 (17%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            FL F R   KVY++ E+   R   F +N+ +A  +Q  D  +AV  V +F DL+  + +
Sbjct: 44  HFLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDP-SAVHGVTRFSDLTPMEFR 102

Query: 104 Q----LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
                L G+ L S   D  P L                        D+LP+ FDWR  G 
Sbjct: 103 HSVLGLRGVGLPSD-ADSAPILPT----------------------DNLPKDFDWREHGA 139

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ VK QG C  CW+FSA G +E  H +    L  LS Q
Sbjct: 140 VTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQ 178


>gi|74152091|dbj|BAE32077.1| unnamed protein product [Mus musculus]
          Length = 245

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 130/225 (57%), Gaps = 29/225 (12%)

Query: 268 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 327
           +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG C  CWAFSAVG
Sbjct: 7   ALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQGSCGACWAFSAVG 59

Query: 328 VVEAMHAIQGNSLTELSVQQLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYP 383
            +E    ++   L  LS Q LVDC       N GC GG M +A QYIIDNGG+ +D +YP
Sbjct: 60  ALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYP 119

Query: 384 YKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYY 441
           YKA++ +  C     +        Y ++P+G+E+ +K+ VAT+GP+SVG++A  +  F+Y
Sbjct: 120 YKATDEK--CHY-NSKNRAATCSGYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFY 176

Query: 442 SGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
             GV D       +N  +    YGT     YW+VKNSWG ++G++
Sbjct: 177 KSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQ 221



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 99/165 (60%), Gaps = 23/165 (13%)

Query: 497 KLSRLATEKLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           KL  L+ + LVDC       N GC GG M +A QYIIDNGG+ +D +YPYKA++ +  C 
Sbjct: 71  KLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEK--CH 128

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRL 610
               +        Y ++P+G+E+ +K+ VAT+GP+SVG++A  +  F+Y  GV D     
Sbjct: 129 Y-NSKNRAATCSGYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD----- 182

Query: 611 CNPKAQ---NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +P      NH +++VGYG  + KD     YW+VKNSWG ++G++
Sbjct: 183 -DPSCTGNVNHGVLVVGYGTLDGKD-----YWLVKNSWGLNFGDQ 221



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 120 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 179
           +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG C  CWAFSAVG
Sbjct: 7   ALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQGSCGACWAFSAVG 59

Query: 180 VVEAMHAIQGNNLTELSVQH 199
            +E    ++   L  LS Q+
Sbjct: 60  ALEGQLKLKTGKLISLSAQN 79


>gi|225456820|ref|XP_002278323.1| PREDICTED: vignain [Vitis vinifera]
          Length = 360

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 156/298 (52%), Gaps = 34/298 (11%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           NL E    HH  V  S+++  +R   F  NV    ++  +D    +  +NKF D++  + 
Sbjct: 36  NLYERWRSHH-TVSRSLDEKHKRFNVFKENVNFVHEFNKKDEPYKL-KLNKFADMTNHEF 93

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +        ST    + +    F  +Q      +F +  ++    +P + DWR +G ++ 
Sbjct: 94  R--------STYAGSKVNHHRMFRGSQH--AAGSFMYEKVK---SVPPSVDWRKKGAVTP 140

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           +K+QG+C  CWAFS V  VE ++ I+ N L  LS Q+LVDCD S N GCNGG M  A ++
Sbjct: 141 IKDQGQCGSCWAFSTVVAVEGINHIKTNKLVSLSEQELVDCDTSENQGCNGGLMGYAFEF 200

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I + GG+ ++Q+YPY A +    C V +     V +  +  +P   E+ + K  A + P+
Sbjct: 201 IKEKGGITTEQSYPYTAEDGT--CDVSKVNSPVVSIDGHETVPPNNEDALLKAAANQ-PI 257

Query: 430 SVGMNANG--LFYYSGGVI------DLNQRL----YGTSI---PYWIVKNSWGSDWGE 472
           SV ++A G    +YS GV       DL+  +    YGT++    YWIVKNSWG+DWGE
Sbjct: 258 SVAIDAGGSAFQFYSEGVFAGRCGTDLDHGVAIVGYGTTLDGTKYWIVKNSWGTDWGE 315



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 92/165 (55%), Gaps = 14/165 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +  +KL  L+ ++LVDCD S N GCNGG M  A ++I + GG+ ++Q+YPY A +  
Sbjct: 162 INHIKTNKLVSLSEQELVDCDTSENQGCNGGLMGYAFEFIKEKGGITTEQSYPYTAEDGT 221

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C V +     V +  +  +P   E+ + K  A + P+SV ++A G    +YS GV   
Sbjct: 222 --CDVSKVNSPVVSIDGHETVPPNNEDALLKAAANQ-PISVAIDAGGSAFQFYSEGVF-- 276

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C     +H + IVGYG     DGT   YWIVKNSWG+DWGE
Sbjct: 277 -AGRCGTDL-DHGVAIVGYG--TTLDGTK--YWIVKNSWGTDWGE 315



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  S+++  +R   F  NV    ++ ++D    + ++NKF D+++ + +      
Sbjct: 42  RSHHTVSRSLDEKHKRFNVFKENVNFVHEFNKKDEPYKL-KLNKFADMTNHEFR------ 94

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             ST    + +    F  +Q      +F +  ++    +P + DWR +G ++ +K+QG+C
Sbjct: 95  --STYAGSKVNHHRMFRGSQH--AAGSFMYEKVK---SVPPSVDWRKKGAVTPIKDQGQC 147

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 148 GSCWAFSTVVAVEGINHIKTNKLVSLSEQ 176


>gi|354473025|ref|XP_003498737.1| PREDICTED: cathepsin S-like [Cricetulus griseus]
          Length = 341

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/264 (37%), Positives = 139/264 (52%), Gaps = 45/264 (17%)

Query: 247 ESDLQQLTGLNLDSTLEDIQPSL----QAPFSSNQTDTEMRAFQFNSLRHGDD------- 295
           E +L+ +   NL+ +LE    SL        +S +   +MR  +  S RH +        
Sbjct: 62  EKNLKLVMLHNLEYSLEMHSYSLGMNHMGDMTSEEVLGQMRPLRVPSQRHRNSTYKSNPN 121

Query: 296 --LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM 353
             LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC  
Sbjct: 122 QKLPDSMDWREKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCST 181

Query: 354 ----SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK--- 406
                N GC+GG M  A QYIIDNGG+ SD +YPYKA        V E+  +  K +   
Sbjct: 182 EEKYGNKGCDGGFMTRAFQYIIDNGGIDSDASYPYKA--------VAEKCHYDSKSRAAT 233

Query: 407 --EYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVID-------LNQRL--- 452
              Y  +P G+EE +K+ VA +GP+SVG++A+    F Y  GV D       +N  +   
Sbjct: 234 CSRYMELPSGDEEALKEAVANKGPVSVGIDASHPSFFLYKSGVYDEPSCTENVNHGVLVV 293

Query: 453 -YGT--SIPYWIVKNSWGSDWGEK 473
            YG      YW+VKNSWG  +G++
Sbjct: 294 GYGNLDGKDYWLVKNSWGLHFGDQ 317



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/167 (41%), Positives = 95/167 (56%), Gaps = 27/167 (16%)

Query: 497 KLSRLATEKLVDCDM----SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           KL  L+ + LVDC       N GC+GG M  A QYIIDNGG+ SD +YPYKA        
Sbjct: 167 KLVSLSAQNLVDCSTEEKYGNKGCDGGFMTRAFQYIIDNGGIDSDASYPYKA-------- 218

Query: 553 VGEEEGFKVKVK-----EYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVID 605
           V E+  +  K +      Y  +P G+EE +K+ VA +GP+SVG++A+    F Y  GV D
Sbjct: 219 VAEKCHYDSKSRAATCSRYMELPSGDEEALKEAVANKGPVSVGIDASHPSFFLYKSGVYD 278

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +  C     NH +++VGYG  + KD     YW+VKNSWG  +G++
Sbjct: 279 --EPSCTENV-NHGVLVVGYGNLDGKD-----YWLVKNSWGLHFGDQ 317



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 13/113 (11%)

Query: 99  DSDLQQLTGLNLDSTLEDIQPSL----QAPFSSNQTDTEMRAFQFNSLRHGDD------- 147
           + +L+ +   NL+ +LE    SL        +S +   +MR  +  S RH +        
Sbjct: 62  EKNLKLVMLHNLEYSLEMHSYSLGMNHMGDMTSEEVLGQMRPLRVPSQRHRNSTYKSNPN 121

Query: 148 --LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 122 QKLPDSMDWREKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQ 174


>gi|30141025|dbj|BAC75926.1| cysteine protease-4 [Helianthus annuus]
          Length = 352

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 157/298 (52%), Gaps = 36/298 (12%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           +L E  +  H K+Y S+++ L R E F+ N++  +D   + S   + G+N+F DL+  + 
Sbjct: 47  HLFESWLAKHSKIYESLDEKLHRFEIFMDNLKHIDDTNKKVSNYWL-GLNEFADLTHEEF 105

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +    L L   L +            + D  +  F   S R   DLP++ DWR +G ++ 
Sbjct: 106 KN-KFLGLKGELPE------------RKDESIEEF---SYRDFVDLPKSVDWRKKGAVAP 149

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG+C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  Y
Sbjct: 150 VKNQGQCGSCWAFSTVAAVEGINQIVTGNLTMLSEQELIDCDTTFNNGCNGGLMDYAFAY 209

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           ++   G+  ++ YPY  SE    C   ++    V +  Y  +P   E+   K +A + P+
Sbjct: 210 VM-RSGLHKEEEYPYIMSEGT--CDEKKDVSETVTISGYHDVPRNNEDSFLKALANQ-PI 265

Query: 430 SVGMNANG--LFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV D      L+  +    YGT+  + Y IV+NSWG  WGEK
Sbjct: 266 SVAIEASGRDFQFYSGGVFDGHCGTELDHGVAAVGYGTTKGLDYVIVRNSWGPKWGEK 323



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 16/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  Y++   G+  ++ YPY  SE    C
Sbjct: 174 IVTGNLTMLSEQELIDCDTTFNNGCNGGLMDYAFAYVM-RSGLHKEEEYPYIMSEGT--C 230

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              ++    V +  Y  +P   E+   K +A + P+SV + A+G    +YSGGV D +  
Sbjct: 231 DEKKDVSETVTISGYHDVPRNNEDSFLKALANQ-PISVAIEASGRDFQFYSGGVFDGH-- 287

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG  +  D     Y IV+NSWG  WGEK
Sbjct: 288 -CGTEL-DHGVAAVGYGTTKGLD-----YVIVRNSWGPKWGEK 323



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 28/190 (14%)

Query: 20  FMIKVALLE----SNIFQTRGY-------LNSPVTRFLNFMRDHDKVYSSVEDLLRRHEN 68
           F++ V++L     +N F   GY       ++  +  F +++  H K+Y S+++ L R E 
Sbjct: 13  FLVFVSVLACSALANEFSILGYAPEDLTSIHKVIHLFESWLAKHSKIYESLDEKLHRFEI 72

Query: 69  FVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSN 128
           F+ N++  +D  ++ S   +  +N+F DL+  + +    L L   L +            
Sbjct: 73  FMDNLKHIDDTNKKVSNYWL-GLNEFADLTHEEFKN-KFLGLKGELPE------------ 118

Query: 129 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
           + D  +  F   S R   DLP++ DWR +G ++ VK QG+C  CWAFS V  VE ++ I 
Sbjct: 119 RKDESIEEF---SYRDFVDLPKSVDWRKKGAVAPVKNQGQCGSCWAFSTVAAVEGINQIV 175

Query: 189 GNNLTELSVQ 198
             NLT LS Q
Sbjct: 176 TGNLTMLSEQ 185


>gi|333069454|gb|AEF13978.1| chymopapain [Carica papaya]
          Length = 352

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 34/288 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H+K+Y S+++ + R E F  N+   ++   +++ +   G+N F DLS  + ++     + 
Sbjct: 55  HNKIYESIDEKIYRFEIFRDNLMYIDETNKKNN-SYWLGLNGFADLSNDEFKKKY---VG 110

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S  ED             T  E    +  + +H  + P++ DWRA+G ++ VK QG C  
Sbjct: 111 SVAEDF------------TGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGSCGS 158

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFS +  VE ++ I   +L ELS Q+LVDCD ++ GC GG    +LQY+ DN GV + 
Sbjct: 159 CWAFSTIATVEGVNKIVTGNLLELSEQELVDCDKNSHGCKGGYQTTSLQYVADN-GVHTS 217

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
           + YPY+A   +  C   ++ G KVK+  Y R+P   E      +A + PLSV + A G  
Sbjct: 218 KVYPYQAKAMQ--CRATDKPGPKVKITGYKRVPSNCETSFLGALANQ-PLSVLVEAGGKP 274

Query: 440 Y--YSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           +  Y  GV D      L+  +    YGTS    Y I+KNSWG +WGEK
Sbjct: 275 FQLYKSGVFDGPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEK 322



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           ++   L  L+ ++LVDCD ++ GC GG    +LQY+ DN GV + + YPY+A   +  C 
Sbjct: 174 IVTGNLLELSEQELVDCDKNSHGCKGGYQTTSLQYVADN-GVHTSKVYPYQAKAMQ--CR 230

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRL 610
             ++ G KVK+  Y R+P   E      +A + PLSV + A G  +  Y  GV D     
Sbjct: 231 ATDKPGPKVKITGYKRVPSNCETSFLGALANQ-PLSVLVEAGGKPFQLYKSGVFD---GP 286

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           C  K  +HA+  VGYG  + K+     Y I+KNSWG +WGEK
Sbjct: 287 CGTKL-DHAVTAVGYGTSDGKN-----YIIIKNSWGPNWGEK 322



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 23/190 (12%)

Query: 16  YLHTFMIKVALLESNIFQTRGYLNSPVTR-------FLNFMRDHDKVYSSVEDLLRRHEN 68
           +L T +I    L S  F T GY    +T        F ++M  H+K+Y S+++ + R E 
Sbjct: 12  FLATCLIIHMSLSSADFYTVGYSQDDLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEI 71

Query: 69  FVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSN 128
           F  N+   ++  ++++ +    +N F DLS+ + ++     + S  ED            
Sbjct: 72  FRDNLMYIDETNKKNN-SYWLGLNGFADLSNDEFKKKY---VGSVAEDF----------- 116

Query: 129 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
            T  E    +  + +H  + P++ DWRA+G ++ VK QG C  CWAFS +  VE ++ I 
Sbjct: 117 -TGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGSCGSCWAFSTIATVEGVNKIV 175

Query: 189 GNNLTELSVQ 198
             NL ELS Q
Sbjct: 176 TGNLLELSEQ 185


>gi|3850787|emb|CAA05360.1| cathepsin S [Mus musculus]
          Length = 330

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 134/237 (56%), Gaps = 32/237 (13%)

Query: 259 DSTLEDI---QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           D T E+I     +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG
Sbjct: 80  DMTNEEILCRMGALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQG 132

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----MSNGGCNGGRMDDALQYII 371
            C  CWAFSAVG +E    ++   L  LS Q LVDC       N GC GG M +A QYII
Sbjct: 133 SCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYII 192

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           DNGG+ +D +YPYKA + +  C     +        Y ++P+G+E+ +K+ VAT+GP+SV
Sbjct: 193 DNGGIEADASYPYKAMDEK--CHY-NSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSV 249

Query: 432 GMNA--NGLFYYSGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           G++A  +  F+Y  GV D       +N  +    YGT     YW+VKNSWG ++G++
Sbjct: 250 GIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQ 306



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 98/165 (59%), Gaps = 23/165 (13%)

Query: 497 KLSRLATEKLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           KL  L+ + LVDC       N GC GG M +A QYIIDNGG+ +D +YPYKA + +  C 
Sbjct: 156 KLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKAMDEK--CH 213

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRL 610
               +        Y ++P+G+E+ +K+ VAT+GP+SVG++A  +  F+Y  GV D     
Sbjct: 214 Y-NSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD----- 267

Query: 611 CNPKAQ---NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +P      NH +++VGYG  + KD     YW+VKNSWG ++G++
Sbjct: 268 -DPSCTGNVNHGVLVVGYGTLDGKD-----YWLVKNSWGLNFGDQ 306



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 10/92 (10%)

Query: 111 DSTLEDI---QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           D T E+I     +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG
Sbjct: 80  DMTNEEILCRMGALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQG 132

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            C  CWAFSAVG +E    ++   L  LS Q+
Sbjct: 133 SCGACWAFSAVGALEGQLKLKTGKLISLSAQN 164


>gi|2239107|emb|CAA70693.1| cathepsin L-like cysteine proteinase [Heterodera glycines]
          Length = 374

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 120/231 (51%), Gaps = 31/231 (13%)

Query: 272 PFSSNQTDTEMRAFQFNSLRHG----------DDLPEAFDWRAEGVISKVKEQGKCACCW 321
           PFS  Q     R    +SLR             DLPE+ DWR +G +++VK QG C  CW
Sbjct: 122 PFSEYQKLNGFRRLMGDSLRRNASTFLAPMNVGDLPESVDWRDKGWVTEVKNQGMCGSCW 181

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSD 379
           AFSA G +E  H      L  LS Q L+DC    G  GCNGG MD+A QYI DN G+  +
Sbjct: 182 AFSATGALEGQHVRDKGHLVSLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNKGIDKE 241

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA---- 435
            AYPYKA   ++ CL    +        Y+ I  G+EE++K  VAT+GP+SV ++A    
Sbjct: 242 TAYPYKAKTGKK-CLFKRND-VGATDSGYNDIAEGDEEDLKMAVATQGPVSVAIDAGHRS 299

Query: 436 -----NGLFY--------YSGGVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
                NG+++           GV+ +      T   YWIVKNSWG+ WGE+
Sbjct: 300 FQLYTNGVYFEKECDPENLDHGVLVVGYGTDPTQGDYWIVKNSWGTRWGEQ 350



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 95/159 (59%), Gaps = 12/159 (7%)

Query: 498 LSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ + L+DC    G  GCNGG MD+A QYI DN G+  + AYPYKA   ++ CL   
Sbjct: 200 LVSLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNKGIDKETAYPYKAKTGKK-CLFKR 258

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNP 613
            +        Y+ I  G+EE++K  VAT+GP+SV ++A    +  Y+ GV    ++ C+P
Sbjct: 259 ND-VGATDSGYNDIAEGDEEDLKMAVATQGPVSVAIDAGHRSFQLYTNGV--YFEKECDP 315

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  +H +++VGYG     D T   YWIVKNSWG+ WGE+
Sbjct: 316 ENLDHGVLVVGYG----TDPTQGDYWIVKNSWGTRWGEQ 350



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 10/86 (11%)

Query: 124 PFSSNQTDTEMRAFQFNSLRHG----------DDLPEAFDWRAEGVISKVKEQGKCACCW 173
           PFS  Q     R    +SLR             DLPE+ DWR +G +++VK QG C  CW
Sbjct: 122 PFSEYQKLNGFRRLMGDSLRRNASTFLAPMNVGDLPESVDWRDKGWVTEVKNQGMCGSCW 181

Query: 174 AFSAVGVVEAMHAIQGNNLTELSVQH 199
           AFSA G +E  H     +L  LS Q+
Sbjct: 182 AFSATGALEGQHVRDKGHLVSLSEQN 207


>gi|2746723|gb|AAB94925.1| cathepsin S precursor [Mus musculus]
          Length = 340

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 136/250 (54%), Gaps = 33/250 (13%)

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
           + +  +D+  +T   +   +  ++ S Q+P          +   F S  +   LP+  DW
Sbjct: 81  YQVGMNDMGDMTNEEISCRMGALRISRQSP----------KTVTFRSYSN-RTLPDTVDW 129

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----MSNGGC 358
           R +G +++VK QG C  CWAFSAVG +E    ++   L  LS Q LVDC       N GC
Sbjct: 130 REKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGC 189

Query: 359 NGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEE 418
            GG M +A QYIIDNGG+ +D +YPYKA + +  C    +         Y ++P+G+E+ 
Sbjct: 190 GGGYMTEAFQYIIDNGGIEADASYPYKAMDEK--CHYNSKNR-AATCSRYIQLPFGDEDA 246

Query: 419 MKKWVATRGPLSVGMNA--NGLFYYSGGVID-------LNQRL----YGT--SIPYWIVK 463
           +K+ VAT+GP+SVG++A  +  F+Y  GV D       +N  +    YGT     YW+VK
Sbjct: 247 LKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVK 306

Query: 464 NSWGSDWGEK 473
           NSWG ++G++
Sbjct: 307 NSWGLNFGDQ 316



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 98/165 (59%), Gaps = 23/165 (13%)

Query: 497 KLSRLATEKLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           KL  L+ + LVDC       N GC GG M +A QYIIDNGG+ +D +YPYKA + +  C 
Sbjct: 166 KLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKAMDEK--CH 223

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRL 610
              +         Y ++P+G+E+ +K+ VAT+GP+SVG++A  +  F+Y  GV D     
Sbjct: 224 YNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD----- 277

Query: 611 CNPKAQ---NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +P      NH +++VGYG  + KD     YW+VKNSWG ++G++
Sbjct: 278 -DPSCTGNVNHGVLVVGYGTLDGKD-----YWLVKNSWGLNFGDQ 316



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 4/89 (4%)

Query: 111 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 170
           D T E+I   + A   S Q+   +  F+  S R    LP+  DWR +G +++VK QG C 
Sbjct: 90  DMTNEEISCRMGALRISRQSPKTV-TFRSYSNR---TLPDTVDWREKGCVTEVKYQGSCG 145

Query: 171 CCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            CWAFSAVG +E    ++   L  LS Q+
Sbjct: 146 ACWAFSAVGALEGQLKLKTGKLISLSAQN 174


>gi|118157|sp|P25779.1|CYSP_TRYCR RecName: Full=Cruzipain; AltName: Full=Cruzaine; AltName:
           Full=Major cysteine proteinase; Flags: Precursor
 gi|162048|gb|AAA30181.1| cruzain [Trypanosoma cruzi]
 gi|29409382|gb|AAM33131.1| cysteine proteinase precursor [Trypanosoma cruzi]
          Length = 467

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P                        P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC+GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYWI+KNSW + WGE+   ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D  ++PYWI+KNSW + WGE+
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWIIKNSWTTQWGEE 313



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 18/157 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
            ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  +
Sbjct: 35  TSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREE 93

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +     N  +     Q   + P                        P A DWRA G ++
Sbjct: 94  FRSRYH-NGAAHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVT 136

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 137 AVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|308476152|ref|XP_003100293.1| hypothetical protein CRE_21852 [Caenorhabditis remanei]
 gi|308265817|gb|EFP09770.1| hypothetical protein CRE_21852 [Caenorhabditis remanei]
          Length = 391

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 159/294 (54%), Gaps = 40/294 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  +D+ Y S+E+   R++ F+ NV++ E  +++  G  +  VN+F D +  +LQ++   
Sbjct: 93  ILKYDRRYPSLEEFQYRYQVFLQNVKEFEAEEAKHFGLDL-DVNEFTDWTNEELQRIVYD 151

Query: 257 NLDSTLEDIQPSLQAPFSSNQTD-TEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           N +                 +TD +E   F+ + L  G   P + DWR +G ++ +K QG
Sbjct: 152 NKNV----------------KTDGSEEVRFEGSYLESGVKRPASIDWRDQGKLTPIKNQG 195

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGG 375
           +C  CWAF+ V  VEA HAI+ N L  LS Q++VDCD  N GC+GG    A++++ +N G
Sbjct: 196 QCGSCWAFATVAAVEAQHAIRKNQLVSLSEQEMVDCDDKNNGCSGGYRPYAMRFVKEN-G 254

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + S++ YPY A + ++ C++ + +  +V + ++ R+    EEE+  WV T+GP++ GM+ 
Sbjct: 255 LESEKEYPYSALKHDQ-CMLKQNDT-RVFIDDF-RMLSQNEEEIANWVGTKGPVTFGMSV 311

Query: 436 NGLFY-YSGGVI-----DLNQRLYGT------------SIPYWIVKNSWGSDWG 471
               Y Y  G+      D  ++  G+               +WIVKNSWG+ WG
Sbjct: 312 TKAMYSYRSGIFNPSADDCAEKSMGSHALTIVGYGGEGEAAFWIVKNSWGTSWG 365



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 97/161 (60%), Gaps = 11/161 (6%)

Query: 492 GVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
            +  ++L  L+ +++VDCD  N GC+GG    A++++ +N G+ S++ YPY A + ++ C
Sbjct: 214 AIRKNQLVSLSEQEMVDCDDKNNGCSGGYRPYAMRFVKEN-GLESEKEYPYSALKHDQ-C 271

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY-YSGGVIDLNQRL 610
           ++ + +  +V + ++ R+    EEE+  WV T+GP++ GM+     Y Y  G+ + +   
Sbjct: 272 MLKQNDT-RVFIDDF-RMLSQNEEEIANWVGTKGPVTFGMSVTKAMYSYRSGIFNPSADD 329

Query: 611 CNPKAQ-NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
           C  K+  +HAL IVGYG E +       +WIVKNSWG+ WG
Sbjct: 330 CAEKSMGSHALTIVGYGGEGEA-----AFWIVKNSWGTSWG 365



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 18/155 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F +F+  +D+ Y S+E+   R++ F+ NV++ E  + +  G  + +VN+F D ++ +LQ+
Sbjct: 89  FNDFILKYDRRYPSLEEFQYRYQVFLQNVKEFEAEEAKHFGLDL-DVNEFTDWTNEELQR 147

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTD-TEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +   N +                 +TD +E   F+ + L  G   P + DWR +G ++ +
Sbjct: 148 IVYDNKNV----------------KTDGSEEVRFEGSYLESGVKRPASIDWRDQGKLTPI 191

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG+C  CWAF+ V  VEA HAI+ N L  LS Q
Sbjct: 192 KNQGQCGSCWAFATVAAVEAQHAIRKNQLVSLSEQ 226


>gi|118395092|ref|XP_001029901.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89284178|gb|EAR82238.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 344

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 31/291 (10%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDS 260
           +K Y +  +      N+ T+ E    +Q E+   A FG  KF D+S  + +    LN D 
Sbjct: 41  NKYYHNEHEHHSSFHNYKTSREHIVKHQMENP-NAKFGHTKFSDMSPEEFENKM-LNFDF 98

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD-----DLPEAFDWRAEGVISKVKEQG 315
           +L     S      +      M+ +    LR G+     DLPE+FDWR +G+I+  K Q 
Sbjct: 99  SLFKKAKSQGIKLKAE----PMKGY----LRQGENVDNSDLPESFDWRDKGIITPAKFQN 150

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGG 375
            C  CW F+  GV+E+ +A++   L   S Q L+DCD  N GC GG M DA Q++  +GG
Sbjct: 151 TCGSCWTFATTGVIESQYALKYGELLHFSEQMLLDCDNINQGCRGGLMTDAYQFLQQSGG 210

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + +  A  Y   ++++     ++   K KV ++ +IP   EE +++ +   GP++VG+NA
Sbjct: 211 IQT--ADTYGDYKNKKDICNFDKAKVKAKVVDWYQIP-ENEETIRRELVKNGPVAVGINA 267

Query: 436 NGLFYYSGGVID-------LNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
             L +Y GG++D       +N  +    YG    IPYW++KN WG++WG K
Sbjct: 268 RTLQFYEGGIVDPKNCDDKINHAVLIVGYGVEEGIPYWLIKNQWGAEWGIK 318



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 100/169 (59%), Gaps = 18/169 (10%)

Query: 491 TGVLPSK-------LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 543
           TGV+ S+       L   + + L+DCD  N GC GG M DA Q++  +GG+ +  A  Y 
Sbjct: 161 TGVIESQYALKYGELLHFSEQMLLDCDNINQGCRGGLMTDAYQFLQQSGGIQT--ADTYG 218

Query: 544 ASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV 603
             ++++     ++   K KV ++ +IP   EE +++ +   GP++VG+NA  L +Y GG+
Sbjct: 219 DYKNKKDICNFDKAKVKAKVVDWYQIP-ENEETIRRELVKNGPVAVGINARTLQFYEGGI 277

Query: 604 IDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +D   + C+ K  NHA++IVGYG EE      IPYW++KN WG++WG K
Sbjct: 278 VD--PKNCDDKI-NHAVLIVGYGVEE-----GIPYWLIKNQWGAEWGIK 318



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 20/173 (11%)

Query: 36  GYLNSPV-----TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFE 90
            Y+N  +       F  F    +K Y +  +      N+ T+ E    +Q E+   A F 
Sbjct: 19  AYMNETIDPQRLAEFEEFKSKFNKYYHNEHEHHSSFHNYKTSREHIVKHQMENP-NAKFG 77

Query: 91  VNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD---- 146
             KF D+S  + +    LN D +L     S      +      M+ +    LR G+    
Sbjct: 78  HTKFSDMSPEEFENKM-LNFDFSLFKKAKSQGIKLKAE----PMKGY----LRQGENVDN 128

Query: 147 -DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            DLPE+FDWR +G+I+  K Q  C  CW F+  GV+E+ +A++   L   S Q
Sbjct: 129 SDLPESFDWRDKGIITPAKFQNTCGSCWTFATTGVIESQYALKYGELLHFSEQ 181


>gi|84181681|gb|AAW78661.2| senescence-specific cysteine protease [Nicotiana tabacum]
          Length = 349

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 148/293 (50%), Gaps = 34/293 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           + HH+KVY  + +   R + F  NVE+ E + + +      G NKF DL+  + + L   
Sbjct: 46  IVHHEKVYKDLNEKEVRFQIFKENVERIEAFNAGEDKGYKLGFNKFSDLTNEEFRVL--- 102

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              +  +   P +    +S++  T  R           D+P   DWR +G ++ +K+Q +
Sbjct: 103 --HTGYKRSHPKV---MTSSKGKTHFRYTNVT------DIPPTMDWRKKGAVTPIKDQKE 151

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV  +E +H ++   L  LS Q+LVDCD+   + GC+GG +D A  +I+ N 
Sbjct: 152 CGCCWAFSAVAAMEGLHQLKTGELIPLSEQELVDCDVEGEDEGCSGGLLDTAFDFILKNK 211

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPYK  +    C   +      K+  Y  +P   E+ + + VA + P+SV ++
Sbjct: 212 GLTTEVNYPYKGEDGV--CNKKKSALSAAKITGYEDVPANSEKALLQAVANQ-PVSVAID 268

Query: 435 ANG--LFYYSGGVID------LNQRL----YGTS---IPYWIVKNSWGSDWGE 472
            +     +YS GV        LN  +    YG +     YWI+KNSWGS WG+
Sbjct: 269 GSSFDFQFYSSGVFSGSCSTWLNHAVTAVGYGATTDGTKYWIIKNSWGSKWGD 321



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 87/159 (54%), Gaps = 15/159 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           +L  L+ ++LVDCD+   + GC+GG +D A  +I+ N G+ ++  YPYK  +    C   
Sbjct: 174 ELIPLSEQELVDCDVEGEDEGCSGGLLDTAFDFILKNKGLTTEVNYPYKGEDGV--CNKK 231

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +      K+  Y  +P   E+ + + VA + P+SV ++ +     +YS GV   +   C+
Sbjct: 232 KSALSAAKITGYEDVPANSEKALLQAVANQ-PVSVAIDGSSFDFQFYSSGVFSGS---CS 287

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               NHA+  VGYG     DGT   YWI+KNSWGS WG+
Sbjct: 288 T-WLNHAVTAVGYG--ATTDGTK--YWIIKNSWGSKWGD 321



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 16/184 (8%)

Query: 17  LHTFMIKVALLESNIFQTR--GYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVE 74
           L  F I + L  S +  +R   Y  +   R   ++  H+KVY  + +   R + F  NVE
Sbjct: 12  LALFFICLGLWSSQVALSRPINYEATMRARHDQWIVHHEKVYKDLNEKEVRFQIFKENVE 71

Query: 75  KAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM 134
           + E +   +        NKF DL++ + + L      +  +   P +    +S++  T  
Sbjct: 72  RIEAFNAGEDKGYKLGFNKFSDLTNEEFRVL-----HTGYKRSHPKV---MTSSKGKTHF 123

Query: 135 RAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTE 194
           R           D+P   DWR +G ++ +K+Q +C CCWAFSAV  +E +H ++   L  
Sbjct: 124 RYTNVT------DIPPTMDWRKKGAVTPIKDQKECGCCWAFSAVAAMEGLHQLKTGELIP 177

Query: 195 LSVQ 198
           LS Q
Sbjct: 178 LSEQ 181


>gi|391328505|ref|XP_003738729.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 323

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 144/300 (48%), Gaps = 42/300 (14%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQ-SEDSGTAVF--GVNKFFDLSESDL 250
           +L  + H K Y   E+  RR + F  +V K   +    D G   +  G+NKF D++  + 
Sbjct: 20  DLYKKVHGKSYGHDEEHFRR-QLFYKSVAKINAHNLRHDLGLTTYRMGLNKFTDMTSEEF 78

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +   GL  D+T                  T+    +F     G+ LP   DWR +G ++ 
Sbjct: 79  RNFKGLKFDAT-----------------KTKRNGTRFQKELLGEALPTQVDWREKGYVTP 121

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQ 368
           VK QG+C  CWAFS  G +E  H      L  LS Q LVDC     N GCNGG MD+   
Sbjct: 122 VKNQGQCGSCWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSRVEGNNGCNGGLMDNGFT 181

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
           YI  NGG+ ++++YPY   + +  C    E     +VK +  +P  +E  ++  VA+ GP
Sbjct: 182 YIQQNGGIDTEESYPYTGKDGD--CAF-NENSVGARVKGFVDVPQRDEAALQAAVASVGP 238

Query: 429 LSVGMNA--NGLFYYSGGVID--------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           +SV ++A  +   YY  GV D        L+  +    YGT   + YW+VKNSWG  WG+
Sbjct: 239 VSVAIDASNDSFQYYKEGVYDEPSCSFSQLDHGVLVVGYGTENGVDYWLVKNSWGPTWGQ 298



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 88/159 (55%), Gaps = 14/159 (8%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD+   YI  NGG+ ++++YPY   + +  C   
Sbjct: 150 KLVSLSEQNLVDCSRVEGNNGCNGGLMDNGFTYIQQNGGIDTEESYPYTGKDGD--CAF- 206

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
            E     +VK +  +P  +E  ++  VA+ GP+SV ++A  +   YY  GV D  +  C+
Sbjct: 207 NENSVGARVKGFVDVPQRDEAALQAAVASVGPVSVAIDASNDSFQYYKEGVYD--EPSCS 264

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               +H +++VGYG E   D     YW+VKNSWG  WG+
Sbjct: 265 FSQLDHGVLVVGYGTENGVD-----YWLVKNSWGPTWGQ 298



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 21/155 (13%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQ-REDSGTAVFE--VNKFFDLSDSDLQQ 104
           + + H K Y   E+  RR + F  +V K   +  R D G   +   +NKF D++  + + 
Sbjct: 22  YKKVHGKSYGHDEEHFRR-QLFYKSVAKINAHNLRHDLGLTTYRMGLNKFTDMTSEEFRN 80

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
             GL  D+T                  T+    +F     G+ LP   DWR +G ++ VK
Sbjct: 81  FKGLKFDAT-----------------KTKRNGTRFQKELLGEALPTQVDWREKGYVTPVK 123

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG+C  CWAFS  G +E  H      L  LS Q+
Sbjct: 124 NQGQCGSCWAFSTTGSLEGQHFKATGKLVSLSEQN 158


>gi|224113123|ref|XP_002316398.1| predicted protein [Populus trichocarpa]
 gi|222865438|gb|EEF02569.1| predicted protein [Populus trichocarpa]
          Length = 327

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 153/311 (49%), Gaps = 55/311 (17%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           ++ ++ H+K Y++ E+ + R   F  N+ +A ++Q+ D  TA+ GV  F DL+E + +++
Sbjct: 15  KMFIKEHNKEYATREEYVHRFGIFGKNLIRAVEHQALDP-TAIHGVTPFMDLTEEEFERM 73

Query: 254 -TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
             G+    T+   + S+                   S      LP++FDWR +G ++ VK
Sbjct: 74  YAGVLGGGTVPVEKGSV-------------------SFMDASGLPDSFDWREKGAVTDVK 114

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRM 363
            QG C  CWAFS  G VE  + I    L  LS QQLVDCD           + GC GG M
Sbjct: 115 IQGSCGSCWAFSTTGSVEGANFIATGKLLNLSEQQLVDCDRVCDKTDKASCDDGCGGGLM 174

Query: 364 DDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWV 423
            +A +Y+I+ GG+  + +YPY     E  C   + E   VKV  ++ I   +E ++   +
Sbjct: 175 TNAYRYLIEAGGLQEESSYPYTGKSGE--CKF-DPEKIAVKVANFTSIAV-DENQIAANL 230

Query: 424 ATRGPLSVGMNANGLFYYSG---------------GVIDLNQRLYGTSI------PYWIV 462
              GPL++G+NA  +  Y G               GV+ +     G SI      PYWI+
Sbjct: 231 VHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGARGYSILRFGYKPYWII 290

Query: 463 KNSWGSDWGEK 473
           KNSWG+ WGEK
Sbjct: 291 KNSWGNHWGEK 301



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 92/175 (52%), Gaps = 25/175 (14%)

Query: 493 VLPSKLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 543
           +   KL  L+ ++LVDCD           + GC GG M +A +Y+I+ GG+  + +YPY 
Sbjct: 137 IATGKLLNLSEQQLVDCDRVCDKTDKASCDDGCGGGLMTNAYRYLIEAGGLQEESSYPYT 196

Query: 544 ASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV 603
               E  C   + E   VKV  ++ I   +E ++   +   GPL++G+NA  +  Y GGV
Sbjct: 197 GKSGE--CKF-DPEKIAVKVANFTSIAV-DENQIAANLVHHGPLAIGLNAIFMQTYIGGV 252

Query: 604 IDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGEK 652
                 +C  K  NH +++VGYG      G SI      PYWI+KNSWG+ WGEK
Sbjct: 253 S--CPLICGKKWLNHGVLLVGYGAR----GYSILRFGYKPYWIIKNSWGNHWGEK 301



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 21/156 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F+++H+K Y++ E+ + R   F  N+ +A ++Q  D  TA+  V  F DL++ + +
Sbjct: 13  KFKMFIKEHNKEYATREEYVHRFGIFGKNLIRAVEHQALDP-TAIHGVTPFMDLTEEEFE 71

Query: 104 QL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           ++  G+    T+   + S+                   S      LP++FDWR +G ++ 
Sbjct: 72  RMYAGVLGGGTVPVEKGSV-------------------SFMDASGLPDSFDWREKGAVTD 112

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CWAFS  G VE  + I    L  LS Q
Sbjct: 113 VKIQGSCGSCWAFSTTGSVEGANFIATGKLLNLSEQ 148


>gi|163658591|gb|ABY28387.1| cathepsin L [Gnathostoma spinigerum]
          Length = 398

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 145/299 (48%), Gaps = 49/299 (16%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H K +  VE+       F  N+E  + +  +   G   F  GVN   DL   + ++L G 
Sbjct: 98  HGKAFDDVENEYDHIFAFTKNLEYIKQHNEKFQRGEVTFEMGVNHLTDLPFDEYKKLNG- 156

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                           F  N  D+  R        H   +P+  DWR    ++ VK+QG+
Sbjct: 157 ----------------FRKNNDDSRPRNGSTFLRPHFVQIPDTVDWRNSSYVTVVKDQGQ 200

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C  CWAFSA G +E  H  + + L  LS Q LVDC     N GCNGG MD+A +YI DN 
Sbjct: 201 CGSCWAFSATGALEGQHMRKTHQLVSLSEQNLVDCSRKYGNNGCNGGLMDNAFEYIKDNH 260

Query: 375 GVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           G+ ++++YPYK  E +    R   VG E+        Y+ +P G+EE +K  VAT GP+S
Sbjct: 261 GIDTEESYPYKGVEGKKCHFRRKFVGAED------YGYTDLPEGDEEALKVAVATIGPIS 314

Query: 431 VGMNANGLFY--YSGGVI--------DLNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           V ++A  + +  Y  G+         DL+  +    YGT   +  YWIVKNSWG+ WGE
Sbjct: 315 VAIDAGHISFQNYRKGIYTENECSPEDLDHGVLVVGYGTDENAGDYWIVKNSWGTRWGE 373



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 20/163 (12%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RG 550
           +L  L+ + LVDC     N GCNGG MD+A +YI DN G+ ++++YPYK  E +    R 
Sbjct: 223 QLVSLSEQNLVDCSRKYGNNGCNGGLMDNAFEYIKDNHGIDTEESYPYKGVEGKKCHFRR 282

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQ 608
             VG E+        Y+ +P G+EE +K  VAT GP+SV ++A  + +  Y  G+   N+
Sbjct: 283 KFVGAED------YGYTDLPEGDEEALKVAVATIGPISVAIDAGHISFQNYRKGIYTENE 336

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C+P+  +H +++VGYG +E     +  YWIVKNSWG+ WGE
Sbjct: 337 --CSPEDLDHGVLVVGYGTDE----NAGDYWIVKNSWGTRWGE 373



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 26/159 (16%)

Query: 47  NFMRDHDKVYSSVEDLLRRHENFVTNVE----KAEDYQREDSGTAVFE--VNKFFDLSDS 100
           +F  +H K +  VE+       F  N+E      E +QR   G   FE  VN   DL   
Sbjct: 93  DFKLEHGKAFDDVENEYDHIFAFTKNLEYIKQHNEKFQR---GEVTFEMGVNHLTDLPFD 149

Query: 101 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
           + ++L G                 F  N  D+  R        H   +P+  DWR    +
Sbjct: 150 EYKKLNG-----------------FRKNNDDSRPRNGSTFLRPHFVQIPDTVDWRNSSYV 192

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + VK+QG+C  CWAFSA G +E  H  + + L  LS Q+
Sbjct: 193 TVVKDQGQCGSCWAFSATGALEGQHMRKTHQLVSLSEQN 231


>gi|261289779|ref|XP_002611751.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
 gi|229297123|gb|EEN67761.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
          Length = 330

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/297 (35%), Positives = 152/297 (51%), Gaps = 48/297 (16%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESD-LQQLTG 255
           HDKVYS  E+  RR   F  N++  E +  E D+G   +  GVN+F D++ ++ L Q+ G
Sbjct: 31  HDKVYSEKEEYARRLI-FQDNLKTIESHNQEADTGKHSYWLGVNQFADMTHAEYLNQVIG 89

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLP--EAFDWRAEGVISKVKE 313
             L               +SN T T  RA    + R+  ++   +  DWR +G+++ +K+
Sbjct: 90  GCL--------------ITSNLTKTGSRA----TYRYMPNMQVNDTVDWRDKGLVTDIKD 131

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYII 371
           QG+C  CWAFS  G +E  HA    +L  LS Q LVDC    G  GC GG MD   QYII
Sbjct: 132 QGQCGSCWAFSTTGSLEGQHAKATGTLVSLSEQNLVDCSRQEGNKGCEGGDMDQGFQYII 191

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
            N G+ ++Q YPYKA      C   +       +  ++ +  G+E+ +K+  A  GP+SV
Sbjct: 192 QNKGIDTEQCYPYKAKNHR--CKF-DNSCIGATMSSFTDVTSGDEDALKQACANIGPISV 248

Query: 432 GMNANG---LFYYSG--------------GVIDLNQRLYGTSIPYWIVKNSWGSDWG 471
           G++A+     FY SG              GV+ +    YG S  YW+VKNSWG+ WG
Sbjct: 249 GIDASHQSFQFYSSGVYNEFECSSTKLDHGVLVVGYGTYG-SKDYWLVKNSWGTVWG 304



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 18/164 (10%)

Query: 491 TGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           TG L S    L+ + LVDC    G  GC GG MD   QYII N G+ ++Q YPYKA    
Sbjct: 155 TGTLVS----LSEQNLVDCSRQEGNKGCEGGDMDQGFQYIIQNKGIDTEQCYPYKAKNHR 210

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDL 606
             C   +       +  ++ +  G+E+ +K+  A  GP+SVG++A+     +YS GV   
Sbjct: 211 --CKF-DNSCIGATMSSFTDVTSGDEDALKQACANIGPISVGIDASHQSFQFYSSGV--Y 265

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
           N+  C+    +H +++VGYG    KD     YW+VKNSWG+ WG
Sbjct: 266 NEFECSSTKLDHGVLVVGYGTYGSKD-----YWLVKNSWGTVWG 304



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 25/158 (15%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVF--EVNKFFDLSDSD-LQ 103
           F   HDKVYS  E+  RR   F  N++  E + +E D+G   +   VN+F D++ ++ L 
Sbjct: 27  FKIKHDKVYSEKEEYARRLI-FQDNLKTIESHNQEADTGKHSYWLGVNQFADMTHAEYLN 85

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLP--EAFDWRAEGVIS 161
           Q+ G  L               +SN T T  RA    + R+  ++   +  DWR +G+++
Sbjct: 86  QVIGGCL--------------ITSNLTKTGSRA----TYRYMPNMQVNDTVDWRDKGLVT 127

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +K+QG+C  CWAFS  G +E  HA     L  LS Q+
Sbjct: 128 DIKDQGQCGSCWAFSTTGSLEGQHAKATGTLVSLSEQN 165


>gi|195334204|ref|XP_002033774.1| GM21500 [Drosophila sechellia]
 gi|194125744|gb|EDW47787.1| GM21500 [Drosophila sechellia]
          Length = 341

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 136/261 (52%), Gaps = 43/261 (16%)

Query: 237 FGVNKFFDLSESDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD 295
             VNK+ DL   + +QL  G N       +   L+A       D   +   F S  H   
Sbjct: 76  LAVNKYADLLHHEFRQLMNGFNYT-----LHKQLRA------ADESFKGVTFISPAHVT- 123

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR +G ++ VK+QG C  CWAFS+ G +E  H  +   L  LS Q LVDC    
Sbjct: 124 LPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKY 183

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYS 409
            N GCNGG MD+A +YI DNGG+ ++++YPY+A +      +G +   + GF       +
Sbjct: 184 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTIGATDRGF-------T 236

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV-----IDLNQRLYGTSI----- 457
            IP G+E++M + VAT GP++V ++A+     +YS GV      D     +G  +     
Sbjct: 237 DIPQGDEKKMAEAVATVGPVAVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGT 296

Query: 458 -----PYWIVKNSWGSDWGEK 473
                 YW+VKNSWG+ WG+K
Sbjct: 297 DESGEDYWLVKNSWGTTWGDK 317



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 104/170 (61%), Gaps = 25/170 (14%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +GVL S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +  
Sbjct: 165 SGVLVS----LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDS 220

Query: 549 ----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGG 602
               +G +   + GF       + IP G+E++M + VAT GP++V ++A+     +YS G
Sbjct: 221 CHFNKGTIGATDRGF-------TDIPQGDEKKMAEAVATVGPVAVAIDASHESFQFYSEG 273

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           V   N+  C+ +  +H +++VG+G +E  +     YW+VKNSWG+ WG+K
Sbjct: 274 V--YNEPQCDAQNLDHGVLVVGFGTDESGE----DYWLVKNSWGTTWGDK 317



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 71/155 (45%), Gaps = 16/155 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSDLQQ 104
           F  +H K Y    +   R + F  N  K A+  QR   G   F+  VNK+ DL   + +Q
Sbjct: 32  FKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 91

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           L  G N       +   L+A       D   +   F S  H   LP++ DWR +G ++ V
Sbjct: 92  LMNGFNYT-----LHKQLRA------ADESFKGVTFISPAHVT-LPKSVDWRTKGAVTAV 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS+ G +E  H  +   L  LS Q
Sbjct: 140 KDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQ 174


>gi|154332647|ref|XP_001562140.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059588|emb|CAM37170.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 148/295 (50%), Gaps = 39/295 (13%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q + +VY+++++  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE +        
Sbjct: 43  QTYQRVYATLDEEQQRLANFQRNLELMREHQANNP-HARFGITKFFDLSEEEFATRY--- 98

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH-GDDL---PEAFDWRAEGVISKVKE 313
                           S      + + F     R  G DL   P A DWR +G ++ VK+
Sbjct: 99  ---------------LSGATHFAKAKKFASQHYRKVGADLSTAPAAVDWREKGAVTPVKD 143

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID- 372
           QG C  CWAFSA+G +E+   +  +SL  LS Q+LV CD  + GCNGG M  A  ++++ 
Sbjct: 144 QGMCGSCWAFSAIGNIESQWYLATHSLISLSEQELVSCDDVDEGCNGGLMLQAFDWLLNN 203

Query: 373 -NGGVVSDQAYPYKASE-SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
            NG V +  +YPY +   S   C    +      +  +  I    E+ M  W+A  GP++
Sbjct: 204 RNGAVYTGVSYPYVSGNGSVPECSESSDLVIGAYIDGHVTIE-SNEDTMAAWLAANGPIA 262

Query: 431 VGMNANGLFYYSGGVI---DLNQRLYGT---------SIPYWIVKNSWGSDWGEK 473
           + ++A+    Y+GGV+   D  Q  +G           +PYW++KNSWG +WGEK
Sbjct: 263 IAVDASAFMSYTGGVLTSCDGKQLNHGVLLVGYNMTGEVPYWLIKNSWGKNWGEK 317



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASE-SERGCLVG 554
           L  L+ ++LV CD  + GCNGG M  A  ++++N  G V +  +YPY +   S   C   
Sbjct: 170 LISLSEQELVSCDDVDEGCNGGLMLQAFDWLLNNRNGAVYTGVSYPYVSGNGSVPECSES 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +      +  +  I    E+ M  W+A  GP+++ ++A+    Y+GGV+      C+ K
Sbjct: 230 SDLVIGAYIDGHVTIE-SNEDTMAAWLAANGPIAIAVDASAFMSYTGGVLTS----CDGK 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             NH +++VGY    +     +PYW++KNSWG +WGEK
Sbjct: 285 QLNHGVLLVGYNMTGE-----VPYWLIKNSWGKNWGEK 317



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 24/167 (14%)

Query: 37  YLNSPVT-RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+  PV+  F  F + + +VY+++++  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGRPVSVLFEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH-GDDL---PEA 151
           DLS+ +                        S      + + F     R  G DL   P A
Sbjct: 88  DLSEEEFATRY------------------LSGATHFAKAKKFASQHYRKVGADLSTAPAA 129

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            DWR +G ++ VK+QG C  CWAFSA+G +E+   +  ++L  LS Q
Sbjct: 130 VDWREKGAVTPVKDQGMCGSCWAFSAIGNIESQWYLATHSLISLSEQ 176


>gi|147788834|emb|CAN64655.1| hypothetical protein VITISV_005140 [Vitis vinifera]
          Length = 341

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 164/327 (50%), Gaps = 48/327 (14%)

Query: 172 CWAFSAVGVVEAMHAIQGNNLTELSV--QHHD------KVYSSVEDLLRRHENFVTNVEK 223
           C A   V    A HA +  NL E S+  +H D      +VY    +  +R++ F  NV +
Sbjct: 11  CLALLFVLAAWASHA-KARNLHEASMYERHEDWMAQYGRVYKDAGEKSKRYKIFKDNVAR 69

Query: 224 AEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMR 283
            E +    + +    +N+F DL+  + +                + +  F ++   TE  
Sbjct: 70  IESFNKAMNKSYKLSINEFADLTNEEFR----------------ASRNRFKAHICSTEAT 113

Query: 284 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTEL 343
           +F++    H   +P   DWR +G ++ +K+QG+C  CWAFSAV  +E +  +    L  L
Sbjct: 114 SFKY---EHVXAVPSTVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISL 170

Query: 344 SVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 401
           S Q+LVDCD S  + GC+GG MDDA ++I  N G+ ++  YPY  ++    C   +    
Sbjct: 171 SEQELVDCDTSGEDQGCSGGLMDDAFKFIEQNHGLTTEANYPYAGTDGT--CNRKKAAHP 228

Query: 402 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL- 452
             K+  Y  +P   E+ ++K VA + P++V ++A G    +YS GV       +L+  + 
Sbjct: 229 AAKINGYEDVPANNEKALQKAVAHQ-PIAVAIDAGGFEFQFYSSGVFTGQCGTELDHGVS 287

Query: 453 ---YGTS---IPYWIVKNSWGSDWGEK 473
              YGTS   + YW+VKNSWG+ WGE+
Sbjct: 288 AVGYGTSDDGMKYWLVKNSWGTGWGEE 314



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD S  + GC+GG MDDA ++I  N G+ ++  YPY  ++ 
Sbjct: 159 ITQLSTGKLISLSEQELVDCDTSGEDQGCSGGLMDDAFKFIEQNHGLTTEANYPYAGTDG 218

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C   +      K+  Y  +P   E+ ++K VA + P++V ++A G    +YS GV  
Sbjct: 219 T--CNRKKAAHPAAKINGYEDVPANNEKALQKAVAHQ-PIAVAIDAGGFEFQFYSSGVFT 275

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H +  VGYG  +  DG  + YW+VKNSWG+ WGE+
Sbjct: 276 GQ---CGTEL-DHGVSAVGYGTSD--DG--MKYWLVKNSWGTGWGEE 314



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 19/166 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R  ++M  + +VY    +  +R++ F  NV + E + +  + +    +N+F DL++ + +
Sbjct: 38  RHEDWMAQYGRVYKDAGEKSKRYKIFKDNVARIESFNKAMNKSYKLSINEFADLTNEEFR 97

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                           + +  F ++   TE  +F++    H   +P   DWR +G ++ +
Sbjct: 98  ----------------ASRNRFKAHICSTEATSFKY---EHVXAVPSTVDWRKKGAVTPI 138

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED 209
           K+QG+C  CWAFSAV  +E +  +    L  LS Q      +S ED
Sbjct: 139 KDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGED 184


>gi|262360187|gb|ACY38051.2| cysteine proteinase C1A [Dactylis glomerata]
          Length = 365

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/196 (40%), Positives = 119/196 (60%), Gaps = 19/196 (9%)

Query: 294 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM 353
           ++LP A DWR +G ++ +K+QG+C  CWAFS +  VE ++ I+   L  LS Q+L+DC++
Sbjct: 130 ENLPAAVDWRQKGAVTPIKDQGQCGSCWAFSTIVAVEGINKIRTGRLVSLSEQELMDCNI 189

Query: 354 S-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG MD A Q+I  NGG+ ++ +YPY+  ++   C   +E    V +  Y  +P
Sbjct: 190 GENDGCNGGLMDVAFQFIQQNGGITTEASYPYQGEQNS--CDQSKENSHDVSIDGYEDVP 247

Query: 413 YGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTS---I 457
             +E  ++K VA + P+SV ++A+G    +YS GV       DL+  +    YGT+    
Sbjct: 248 ANDESALQKAVANQ-PVSVAIDASGNDFQFYSEGVFTTDGGTDLDHGVAAVGYGTTRDGT 306

Query: 458 PYWIVKNSWGSDWGEK 473
            YWIVKNSWG DWGEK
Sbjct: 307 KYWIVKNSWGEDWGEK 322



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 14/166 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +   +L  L+ ++L+DC++  N GCNGG MD A Q+I  NGG+ ++ +YPY+  ++ 
Sbjct: 168 INKIRTGRLVSLSEQELMDCNIGENDGCNGGLMDVAFQFIQQNGGITTEASYPYQGEQNS 227

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C   +E    V +  Y  +P  +E  ++K VA + P+SV ++A+G    +YS GV   
Sbjct: 228 --CDQSKENSHDVSIDGYEDVPANDESALQKAVANQ-PVSVAIDASGNDFQFYSEGVFTT 284

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +         +H +  VGYG    +DGT   YWIVKNSWG DWGEK
Sbjct: 285 D----GGTDLDHGVAAVGYG--TTRDGTK--YWIVKNSWGEDWGEK 322



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 35/53 (66%)

Query: 146 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++LP A DWR +G ++ +K+QG+C  CWAFS +  VE ++ I+   L  LS Q
Sbjct: 130 ENLPAAVDWRQKGAVTPIKDQGQCGSCWAFSTIVAVEGINKIRTGRLVSLSEQ 182


>gi|394331818|gb|AFN27128.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 172/375 (45%), Gaps = 47/375 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWRKKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ LT LS   LV C   N GC GG M  A ++++   NG + 
Sbjct: 150 CWAFSAVGSIESQWALAGHRLTALSEHHLVSCHDKNSGCTGGLMLQAFEWLLRNMNGTMF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +S      C    +     ++  Y  I    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIE-SSETVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGV------IDLNQ--RLYGTS----IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV      I LN    L G +    +PYW++KNSWG +WGE   V   +G + 
Sbjct: 269 SFMSYQSGVLTSCAGISLNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMGVNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM-SNGGCNGGRMDDALQYI 528
               +  ++  +P  L+             R+  E+++  DM    GC    +   + + 
Sbjct: 329 CLLTEYPVSAHVPQSLTPGPSTESEERAPKRVMVEQIICTDMYCREGCRKTLLTANVCHP 388

Query: 529 IDNGGVVSDQAYPYK 543
              GG    +  P K
Sbjct: 389 NGGGGSSMTKCSPPK 403



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 13/158 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L+ L+   LV C   N GC GG M  A ++++ N  G + ++ +YPY +S      C  
Sbjct: 169 RLTALSEHHLVSCHDKNSGCTGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             +     ++  Y  I    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSQLVPGARIDGYMTIE-SSETVMAAWLAKNGPISIAVDASSFMSYQSGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            + NH +++VGY    +     +PYW++KNSWG +WGE
Sbjct: 284 ISLNHGVLLVGYNRTGE-----VPYWVIKNSWGENWGE 316



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 20/171 (11%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADL-------------SAVPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH----HDK 202
            +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ LT LS  H    HDK
Sbjct: 134 KKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSEHHLVSCHDK 184


>gi|50355619|dbj|BAD29958.1| cysteine protease [Daucus carota]
          Length = 496

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 161/302 (53%), Gaps = 37/302 (12%)

Query: 188 QGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQ-SEDSGTAVFGVNKFFDLS 246
           +   L E  +  H K Y+++ +  +R + F  N+   ++    ED G  + G+NKF DL+
Sbjct: 40  EATTLFESWLVTHGKSYNALGEEEKRFQIFKNNLRYIDEQNLVEDRGFKL-GLNKFADLT 98

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
             + + + TG+      +D++  + A           ++ ++ +L  G+ LPE+ DWR  
Sbjct: 99  NEEYRSKYTGIKS----KDLRKKVSA-----------KSGRYATL-SGESLPESVDWRES 142

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMD 364
           G ++ VK+QG C  CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD
Sbjct: 143 GAVATVKDQGSCGSCWAFSTISAVEGINQIATGKLITLSEQELVDCDRSYNEGCNGGLMD 202

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
            A ++II+NGG+ +D  YPY   + +  C    +    V +  Y  +P  +E  +KK  A
Sbjct: 203 YAFEFIINNGGIDTDVDYPYTGRDGK--CDQYRKNAKVVTIDSYEDVPAYDELALKKAAA 260

Query: 425 TRGPLSVGMNANG--LFYYSGGV------IDLNQRL----YGT--SIPYWIVKNSWGSDW 470
            + P+SV + A+G    +Y  G+      I L+  +    YGT     YWIV+NSWG+DW
Sbjct: 261 NQ-PISVAIEASGRDFQFYDSGIFTGKCGIALDHGVVVVGYGTENGKDYWIVRNSWGADW 319

Query: 471 GE 472
           GE
Sbjct: 320 GE 321



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 93/166 (56%), Gaps = 15/166 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   KL  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +D  YPY   + +  C
Sbjct: 172 IATGKLITLSEQELVDCDRSYNEGCNGGLMDYAFEFIINNGGIDTDVDYPYTGRDGK--C 229

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
               +    V +  Y  +P  +E  +KK  A + P+SV + A+G    +Y  G+      
Sbjct: 230 DQYRKNAKVVTIDSYEDVPAYDELALKKAAANQ-PISVAIEASGRDFQFYDSGIFTGKCG 288

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           +    A +H +++VGYG E  KD     YWIV+NSWG+DWGE   L
Sbjct: 289 I----ALDHGVVVVGYGTENGKD-----YWIVRNSWGADWGENGYL 325



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 17/158 (10%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
            T F +++  H K Y+++ +  +R + F  N+   ++    +       +NKF DL++ +
Sbjct: 42  TTLFESWLVTHGKSYNALGEEEKRFQIFKNNLRYIDEQNLVEDRGFKLGLNKFADLTNEE 101

Query: 102 LQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            + + TG+      +D++  + A           ++ ++ +L  G+ LPE+ DWR  G +
Sbjct: 102 YRSKYTGIKS----KDLRKKVSA-----------KSGRYATL-SGESLPESVDWRESGAV 145

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           + VK+QG C  CWAFS +  VE ++ I    L  LS Q
Sbjct: 146 ATVKDQGSCGSCWAFSTISAVEGINQIATGKLITLSEQ 183


>gi|163914827|ref|NP_001106423.1| cathepsin F precursor [Xenopus (Silurana) tropicalis]
 gi|157423494|gb|AAI53364.1| LOC100127591 protein [Xenopus (Silurana) tropicalis]
          Length = 463

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 143/293 (48%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  ++K YS  E+  RR + F  N++KA+  Q  D GTA +GV K+ DL+E + + L  L
Sbjct: 170 VTTYNKKYSDQEEAARRLQIFSQNLKKAQMIQEMDQGTAEYGVTKYSDLTEDEFRSLY-L 228

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           N              P  S++   +M+     ++      P+ +DWR  G +++VK QG 
Sbjct: 229 N--------------PLLSSKPLYQMK----KAIVPNMSAPDQWDWRDHGAVTEVKNQGM 270

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS +G +E    ++  SL  LS Q+LVDCD  +  C GG   +A + I   GG+
Sbjct: 271 CGSCWAFSVIGNIEGQWFLKKGSLVSLSEQELVDCDGVDHACAGGLPSNAYEAIEKLGGI 330

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++Q Y Y   E  +             +     IP  +E E+  W+A  GP+S+ +NA 
Sbjct: 331 ETEQEYSY---EGHKNTCSFSTSKVSAYINSSVEIP-KDENEIAAWLAQNGPISIALNAF 386

Query: 437 GLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
            + +Y  G+            ID    L G       P+W +KNSWG+DWGE+
Sbjct: 387 AMQFYRKGISHPFRILCNPWMIDHAVLLVGYGERNGTPFWAIKNSWGTDWGEQ 439



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 9/155 (5%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  +  C GG   +A + I   GG+ ++Q Y Y   E  +        
Sbjct: 294 LVSLSEQELVDCDGVDHACAGGLPSNAYEAIEKLGGIETEQEYSY---EGHKNTCSFSTS 350

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
                +     IP  +E E+  W+A  GP+S+ +NA  + +Y  G+    + LCNP   +
Sbjct: 351 KVSAYINSSVEIP-KDENEIAAWLAQNGPISIALNAFAMQFYRKGISHPFRILCNPWMID 409

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           HA+++VGYGE   ++GT  P+W +KNSWG+DWGE+
Sbjct: 410 HAVLLVGYGE---RNGT--PFWAIKNSWGTDWGEQ 439



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 19/157 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +T F +F+  ++K YS  E+  RR + F  N++KA+  Q  D GTA + V K+ DL++ +
Sbjct: 163 LTLFKDFVTTYNKKYSDQEEAARRLQIFSQNLKKAQMIQEMDQGTAEYGVTKYSDLTEDE 222

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            + L  LN              P  S++   +M+     ++      P+ +DWR  G ++
Sbjct: 223 FRSLY-LN--------------PLLSSKPLYQMK----KAIVPNMSAPDQWDWRDHGAVT 263

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +VK QG C  CWAFS +G +E    ++  +L  LS Q
Sbjct: 264 EVKNQGMCGSCWAFSVIGNIEGQWFLKKGSLVSLSEQ 300


>gi|281427380|ref|NP_001163996.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|281427798|ref|NP_001164001.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|270001241|gb|EEZ97688.1| cathepsin L precursor [Tribolium castaneum]
 gi|270016928|gb|EFA13374.1| hypothetical protein TcasGA2_TC001950 [Tribolium castaneum]
          Length = 328

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/294 (36%), Positives = 147/294 (50%), Gaps = 42/294 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG---TAVFGVNKFFDLSESDLQQLTGL 256
           H K YSS  + LRR   F  N+ K E++ ++ +    T    VN+F D++  +       
Sbjct: 33  HKKQYSSPIEELRRKAIFQDNLVKIEEHNAKFAKGEVTYTKAVNQFADMTADEFMAYVNR 92

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L +T   +   L+ PF                ++ G       DWR++ V ++VK+QG+
Sbjct: 93  GL-ATKPKMNEKLRIPF----------------VKSGKPAAAEVDWRSKAV-TEVKDQGQ 134

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDNG 374
           C  CW+FS  G VE   AI G  LT LS Q LVDC     N GCNGG MD A  YI DN 
Sbjct: 135 CGSCWSFSTTGAVEGQLAISGKGLTSLSEQNLVDCSSQYGNAGCNGGWMDSAFDYIHDN- 193

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G++S+ AYPY A +    C     +     ++ Y  IP G+E  ++  VA  GP++V ++
Sbjct: 194 GIMSESAYPYTAMDGN--CRFDASQSV-TSLQGYYDIPSGDESALQDAVANNGPVAVALD 250

Query: 435 AN-GLFYYSGGVI--------DLNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           A   L  YSGGV+         LN  +    YG+     YWIVKNSWGS WGE+
Sbjct: 251 ATEELQLYSGGVLYDTTCSAQALNHGVLVVGYGSEGGQDYWIVKNSWGSGWGEQ 304



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 92/158 (58%), Gaps = 14/158 (8%)

Query: 498 LSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LVDC     N GCNGG MD A  YI DNG ++S+ AYPY A +    C    
Sbjct: 158 LTSLSEQNLVDCSSQYGNAGCNGGWMDSAFDYIHDNG-IMSESAYPYTAMDGN--CRFDA 214

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG-LFYYSGGVIDLNQRLCNPK 614
            +     ++ Y  IP G+E  ++  VA  GP++V ++A   L  YSGGV  L    C+ +
Sbjct: 215 SQSV-TSLQGYYDIPSGDESALQDAVANNGPVAVALDATEELQLYSGGV--LYDTTCSAQ 271

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A NH +++VGYG E  +D     YWIVKNSWGS WGE+
Sbjct: 272 ALNHGVLVVGYGSEGGQD-----YWIVKNSWGSGWGEQ 304



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 26/187 (13%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSPV-TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           + TF++    L   +  T     SPV  ++  F   H K YSS  + LRR   F  N+ K
Sbjct: 1   MKTFIV----LALAVVATLAVPQSPVHAKWAEFKLTHKKQYSSPIEELRRKAIFQDNLVK 56

Query: 76  AEDYQREDSG---TAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDT 132
            E++  + +    T    VN+F D++  +        L +T   +   L+ PF       
Sbjct: 57  IEEHNAKFAKGEVTYTKAVNQFADMTADEFMAYVNRGL-ATKPKMNEKLRIPF------- 108

Query: 133 EMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNL 192
                    ++ G       DWR++ V ++VK+QG+C  CW+FS  G VE   AI G  L
Sbjct: 109 ---------VKSGKPAAAEVDWRSKAV-TEVKDQGQCGSCWSFSTTGAVEGQLAISGKGL 158

Query: 193 TELSVQH 199
           T LS Q+
Sbjct: 159 TSLSEQN 165


>gi|21483184|gb|AAF86584.1| cathepsin L cysteine protease [Haemonchus contortus]
          Length = 355

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 148/295 (50%), Gaps = 48/295 (16%)

Query: 215 ENFVTNVEKAEDYQSEDS-GTAVF--GVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           E FV NV   E++  E   G   F  G+N+  DL  S  ++L G  +     D       
Sbjct: 69  EAFVKNVIHIEEHNKEHRLGRKTFEMGLNEIADLPFSQYRKLNGYRMRRQFGD------- 121

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
              S Q++       FN       +PE+ DWR EG+++ VK QG C  CWAFS+ G +E 
Sbjct: 122 ---SMQSNGTKFLVPFNV-----QIPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEG 173

Query: 332 MHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 389
            HA     L  LS Q LVDC     N GCNGG MD A +YI +N GV ++ +YPY   E+
Sbjct: 174 QHARATGKLVSLSEQNLVDCSTKYGNHGCNGGLMDLAFEYIKENHGVDTEDSYPYVGRET 233

Query: 390 ----ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSG 443
               +R  +  +++GF         +P G+EE +KK VAT+GP+S+ ++A    +  Y  
Sbjct: 234 KCHFKRNTVGADDKGF-------VDLPEGDEEALKKAVATQGPISIAIDAGHRSFQLYKK 286

Query: 444 GVI--------DLNQRL----YGT---SIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           GV         +L+  +    YGT   +  YW+VKNSWG  WGEK   ++  + N
Sbjct: 287 GVYFDEECSSEELDHGVLLVGYGTDPEAGDYWLVKNSWGPTWGEKGYIRIARNRN 341



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 94/164 (57%), Gaps = 21/164 (12%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES----ERG 550
           KL  L+ + LVDC     N GCNGG MD A +YI +N GV ++ +YPY   E+    +R 
Sbjct: 181 KLVSLSEQNLVDCSTKYGNHGCNGGLMDLAFEYIKENHGVDTEDSYPYVGRETKCHFKRN 240

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQ 608
            +  +++GF         +P G+EE +KK VAT+GP+S+ ++A    +  Y  GV    +
Sbjct: 241 TVGADDKGF-------VDLPEGDEEALKKAVATQGPISIAIDAGHRSFQLYKKGVYFDEE 293

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C+ +  +H +++VGYG     D  +  YW+VKNSWG  WGEK
Sbjct: 294 --CSSEELDHGVLLVGYG----TDPEAGDYWLVKNSWGPTWGEK 331



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 63/135 (46%), Gaps = 18/135 (13%)

Query: 67  ENFVTNVEKAEDYQREDS-GTAVFE--VNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           E FV NV   E++ +E   G   FE  +N+  DL  S  ++L G  +     D       
Sbjct: 69  EAFVKNVIHIEEHNKEHRLGRKTFEMGLNEIADLPFSQYRKLNGYRMRRQFGD------- 121

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
              S Q++       FN       +PE+ DWR EG+++ VK QG C  CWAFS+ G +E 
Sbjct: 122 ---SMQSNGTKFLVPFNV-----QIPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEG 173

Query: 184 MHAIQGNNLTELSVQ 198
            HA     L  LS Q
Sbjct: 174 QHARATGKLVSLSEQ 188


>gi|1173630|gb|AAB37233.1| cysteine proteinase [Phalaenopsis sp. SM9108]
          Length = 359

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 159/336 (47%), Gaps = 32/336 (9%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           NL E    HH  V   +++  +R   F  N     D+           +NKF DL+  + 
Sbjct: 36  NLYERWRSHH-TVSRDLDEKQKRFNVFKENPRYIHDFNKRKDIPYKLRLNKFADLTNHEF 94

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +        ST    + +       ++      +F + SL     LP + DWR +G ++ 
Sbjct: 95  R--------STYAGSRINHHRSLRGSRRGGATNSFMYQSL-DSRSLPASIDWRQKGAVTA 145

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQY 369
           VK+QG+C  CWAFS V  VE ++ I+   L  LS Q+L+DCD   N GCNGG MD A  +
Sbjct: 146 VKDQGQCGSCWAFSTVAAVEGINQIKTKKLLSLSEQELIDCDTDENNGCNGGLMDYAFDF 205

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I  NGG+ S+  YPY A +S       E++   V +  +  +P  +E+ + K VA + P+
Sbjct: 206 IKKNGGISSEAEYPYAAEDS---YCATEKKSHVVSIDGHEDVPANDEDSLLKAVANQ-PV 261

Query: 430 SVGMNANG--LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK- 473
           S+ + A+G    +YS GV       +L+  +    YG +     YWIV+NSWG++WGEK 
Sbjct: 262 SIAIEASGYDFQFYSEGVFTGRSGTELDHGVAIVGYGKTQQGTKYWIVRNSWGAEWGEKG 321

Query: 474 -VEDKVGSSGNRTRDLELTGVLPSKLSRLATEKLVD 508
            +     S   R   L +    P K S   + K  D
Sbjct: 322 YIRISAASDSKRLCGLAMEASYPIKTSPNPSHKSRD 357



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +   KL  L+ ++L+DCD   N GCNGG MD A  +I  NGG+ S+  YPY A +S 
Sbjct: 167 INQIKTKKLLSLSEQELIDCDTDENNGCNGGLMDYAFDFIKKNGGISSEAEYPYAAEDS- 225

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
                 E++   V +  +  +P  +E+ + K VA + P+S+ + A+G    +YS GV   
Sbjct: 226 --YCATEKKSHVVSIDGHEDVPANDEDSLLKAVANQ-PVSIAIEASGYDFQFYSEGVFTG 282

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                +    +H + IVGYG+ ++  GT   YWIV+NSWG++WGEK
Sbjct: 283 R----SGTELDHGVAIVGYGKTQQ--GTK--YWIVRNSWGAEWGEK 320



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 9/149 (6%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V   +++  +R   F  N     D+ +         +NKF DL++ + +      
Sbjct: 42  RSHHTVSRDLDEKQKRFNVFKENPRYIHDFNKRKDIPYKLRLNKFADLTNHEFR------ 95

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             ST    + +       ++      +F + SL     LP + DWR +G ++ VK+QG+C
Sbjct: 96  --STYAGSRINHHRSLRGSRRGGATNSFMYQSL-DSRSLPASIDWRQKGAVTAVKDQGQC 152

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+   L  LS Q
Sbjct: 153 GSCWAFSTVAAVEGINQIKTKKLLSLSEQ 181


>gi|357160572|ref|XP_003578808.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 153/311 (49%), Gaps = 51/311 (16%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF--GVNKFFDLSESDLQQLTGL 256
            + +VY    +  ++ E F  N   AE   S ++G   F  G+N+F D++  + +     
Sbjct: 43  QYGRVYKDAAEKAQKFEVFKAN---AEFINSFNAGNHKFWLGINQFADITNEEFKA---- 95

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                           F SN+       F + ++   D LP   DWR +G ++ +K+QG+
Sbjct: 96  ----------TKTNKGFISNKVRVP-TGFMYENMSF-DALPATIDWRTKGAVTPIKDQGQ 143

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV  +E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II NG
Sbjct: 144 CGCCWAFSAVAAMEGIVKLSTGKLVSLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNG 203

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+  +  YPY A++ +  C  G        +K Y  +P   E  + K VA + P+SV ++
Sbjct: 204 GLTQESNYPYDAADGK--CKSGSSSA--ATIKSYEDVPANNEGALMKAVANQ-PVSVAVD 258

Query: 435 ANGLF--YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK------ 473
              +   +YSGGV+      DL+  +    YGT+     +WI+KNSWG+ WGE       
Sbjct: 259 GGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGTTSDGTKFWIMKNSWGTSWGENGFLRME 318

Query: 474 --VEDKVGSSG 482
             + DK G  G
Sbjct: 319 KDIADKKGMCG 329



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+  +  YPY A++ +  C  G
Sbjct: 166 KLVSLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTQESNYPYDAADGK--CKSG 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P   E  + K VA + P+SV ++   +   +YSGGV+  +   C 
Sbjct: 224 SSSA--ATIKSYEDVPANNEGALMKAVANQ-PVSVAVDGGDMTFQFYSGGVMTGS---CG 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H +  +GYG     DGT   +WI+KNSWG+ WGE   L
Sbjct: 278 TDL-DHGIAAIGYGTTS--DGTK--FWIMKNSWGTSWGENGFL 315



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 21/161 (13%)

Query: 40  SPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF--EVNKFFDL 97
           S V R  N+M  + +VY    +  ++ E F  N E    +   ++G   F   +N+F D+
Sbjct: 32  SMVARHENWMLQYGRVYKDAAEKAQKFEVFKANAEFINSF---NAGNHKFWLGINQFADI 88

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           ++ + +                     F SN+       F + ++   D LP   DWR +
Sbjct: 89  TNEEFKA--------------TKTNKGFISNKVRVP-TGFMYENMSF-DALPATIDWRTK 132

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G ++ +K+QG+C CCWAFSAV  +E +  +    L  LS Q
Sbjct: 133 GAVTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLVSLSEQ 173


>gi|312282059|dbj|BAJ33895.1| unnamed protein product [Thellungiella halophila]
          Length = 379

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/291 (34%), Positives = 150/291 (51%), Gaps = 33/291 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H KVY SV +  RR   F  N+    +  SE+ G    G+N+F DLS  + +++   
Sbjct: 68  IVKHGKVYDSVAEKERRLTIFKDNLRFITNRNSENLGYR-LGLNRFADLSLHEYKEIC-- 124

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                  D +P     F S+    +  A        GD LP++ DWR EG +++VK+QG 
Sbjct: 125 ----HGADPKPPRNHVFMSSSDRYKTSA--------GDVLPKSVDWRNEGAVTEVKDQGH 172

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS VG VE ++ I    L  LS Q L++C+  N GC GG+++ A ++I+ NGG+
Sbjct: 173 CRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKENNGCGGGKVETAYEFIVSNGGL 232

Query: 377 VSDQAYPYKASESERGCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
            +D  YPYKA      C    +E  K V +  Y  +P  +E  + K VA + P++  +++
Sbjct: 233 GTDNDYPYKAVNG--ACDGRLKENIKNVMIDGYENLPANDELALMKAVAHQ-PVTAVIDS 289

Query: 436 NGLFY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           +   +  Y  GV D      LN  +    YGT     YWIV+NSWG+ WGE
Sbjct: 290 SSREFQLYESGVFDGRCGTNLNHGVVVVGYGTENGRNYWIVRNSWGNTWGE 340



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 91/165 (55%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  ++  +L  L+ + L++C+  N GC GG+++ A ++I+ NGG+ +D  YPYKA     
Sbjct: 188 LNKIVTGELVTLSEQDLINCNKENNGCGGGKVETAYEFIVSNGGLGTDNDYPYKAVNG-- 245

Query: 550 GCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
            C    +E  K V +  Y  +P  +E  + K VA + P++  ++++   +  Y  GV D 
Sbjct: 246 ACDGRLKENIKNVMIDGYENLPANDELALMKAVAHQ-PVTAVIDSSSREFQLYESGVFD- 303

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C     NH +++VGYG E  ++     YWIV+NSWG+ WGE
Sbjct: 304 --GRCGTNL-NHGVVVVGYGTENGRN-----YWIVRNSWGNTWGE 340



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F +++  H KVY SV +  RR   F  N+    +   E+ G     +N+F DLS  + ++
Sbjct: 64  FESWIVKHGKVYDSVAEKERRLTIFKDNLRFITNRNSENLGYR-LGLNRFADLSLHEYKE 122

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +          D +P     F S+    +  A        GD LP++ DWR EG +++VK
Sbjct: 123 IC------HGADPKPPRNHVFMSSSDRYKTSA--------GDVLPKSVDWRNEGAVTEVK 168

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFS VG VE ++ I    L  LS Q
Sbjct: 169 DQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQ 202


>gi|11464864|gb|AAG35357.1|AF314929_1 cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P                        P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC+GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYWI+KNSW + WGE+   ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D  ++PYWI+KNSW + WGE+
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWIIKNSWTTQWGEE 313



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 18/157 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
            ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  +
Sbjct: 35  TSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREE 93

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +     N  +     Q   + P                        P A DWRA G ++
Sbjct: 94  FRSRYH-NGAAHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVT 136

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 137 AVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|1136312|gb|AAB41118.1| cruzipain [Trypanosoma cruzi]
          Length = 383

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYGSAAEEAFRLSVFRANLFLARLHAAANP-HATFGVTAFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P +                      P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYW++KNSW + WGE    ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWVIKNSWTTQWGEDGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYW++KNSW + WGE
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWVIKNSWTTQWGE 312



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  + 
Sbjct: 36  SQFAEFKQKHGRVYGSAAEEAFRLSVFRANLFLARLHAAANP-HATFGVTAFSDLTREEF 94

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +     N  +     Q   + P +                      P A DWRA G ++ 
Sbjct: 95  RSRYH-NGAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTA 137

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 138 VKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|328909405|gb|AEB61370.1| cathepsin S-like protein, partial [Equus caballus]
          Length = 281

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 118/198 (59%), Gaps = 21/198 (10%)

Query: 294 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM 353
           + LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++  +L  LS Q LVDC  
Sbjct: 63  EKLPDSLDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQNLVDCST 122

Query: 354 ---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 410
              SN GCNGG M  A QYIIDN G+ SD +YPYKA +   G    + +       +Y+ 
Sbjct: 123 EKYSNKGCNGGFMTAAFQYIIDNNGIDSDASYPYKAMD---GKCRYDSKNRAATCSKYTE 179

Query: 411 IPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--T 455
           +P+G E+++K+ VA +GP+SV ++A+    F Y  GV        ++N  +    YG   
Sbjct: 180 LPFGSEDDLKEAVANKGPVSVAIDASHPSFFLYKSGVYYDPSCTQNVNHGVLVVGYGNLN 239

Query: 456 SIPYWIVKNSWGSDWGEK 473
              YW+VKNSWG ++G+K
Sbjct: 240 GKDYWLVKNSWGINFGDK 257



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 103/199 (51%), Gaps = 26/199 (13%)

Query: 469 DWGEK---VEDKVGSSGNRTRDLELTGVLPSKLS-------RLATEKLVDCDM---SNGG 515
           DW EK    E K   S          G L ++L         L+ + LVDC     SN G
Sbjct: 70  DWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQNLVDCSTEKYSNKG 129

Query: 516 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 575
           CNGG M  A QYIIDN G+ SD +YPYKA +   G    + +       +Y+ +P+G E+
Sbjct: 130 CNGGFMTAAFQYIIDNNGIDSDASYPYKAMD---GKCRYDSKNRAATCSKYTELPFGSED 186

Query: 576 EMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDG 633
           ++K+ VA +GP+SV ++A+    F Y  GV       C     NH +++VGYG    KD 
Sbjct: 187 DLKEAVANKGPVSVAIDASHPSFFLYKSGV--YYDPSCTQNV-NHGVLVVGYGNLNGKD- 242

Query: 634 TSIPYWIVKNSWGSDWGEK 652
               YW+VKNSWG ++G+K
Sbjct: 243 ----YWLVKNSWGINFGDK 257



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 37/54 (68%)

Query: 146 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++  NL  LS Q+
Sbjct: 63  EKLPDSLDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQN 116


>gi|154332649|ref|XP_001562141.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059589|emb|CAM37171.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 154/299 (51%), Gaps = 47/299 (15%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL--QQLTG 255
           Q + +VY+++++  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE +   + L+G
Sbjct: 43  QTYQRVYATLDEEQQRLANFQRNLELMREHQANNP-HARFGITKFFDLSEEEFATRYLSG 101

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH---GDDL---PEAFDWRAEGVIS 309
               +                      +A +F S  +   G DL   P A DWR +G ++
Sbjct: 102 ATHFA----------------------KAKKFASQHYRKVGADLSTAPAAVDWREKGAVT 139

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQY 369
            VK+QG C  CWAFSA+G +E+   +  +SL  LS Q+LV CD  + GCNGG M  A  +
Sbjct: 140 PVKDQGMCGSCWAFSAIGNIESQWYLATHSLISLSEQELVSCDDVDEGCNGGLMLQAFDW 199

Query: 370 IID--NGGVVSDQAYPYKASE-SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATR 426
           +++  NG V +  +YPY +   S   C    +      +  +  I    E+ M  W+A  
Sbjct: 200 LLNNRNGAVYTGVSYPYVSGNGSVPECSESSDLVIGAYIDGHVTIE-SNEDTMAAWLAAN 258

Query: 427 GPLSVGMNANGLFYYSGGVI---DLNQRLYGT---------SIPYWIVKNSWGSDWGEK 473
           GP+++ ++A+    Y+GGV+   D  Q  +G           +PYW++KNSWG +WGEK
Sbjct: 259 GPIAIAVDASAFMSYTGGVLTSCDGKQLNHGVLLVGYNMTGEVPYWLIKNSWGENWGEK 317



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASE-SERGCLVG 554
           L  L+ ++LV CD  + GCNGG M  A  ++++N  G V +  +YPY +   S   C   
Sbjct: 170 LISLSEQELVSCDDVDEGCNGGLMLQAFDWLLNNRNGAVYTGVSYPYVSGNGSVPECSES 229

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +      +  +  I    E+ M  W+A  GP+++ ++A+    Y+GGV+      C+ K
Sbjct: 230 SDLVIGAYIDGHVTIE-SNEDTMAAWLAANGPIAIAVDASAFMSYTGGVLTS----CDGK 284

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             NH +++VGY    +     +PYW++KNSWG +WGEK
Sbjct: 285 QLNHGVLLVGYNMTGE-----VPYWLIKNSWGENWGEK 317



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 32/171 (18%)

Query: 37  YLNSPVT-RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+  PV+  F  F + + +VY+++++  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGRPVSVLFEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNP-HARFGITKFF 87

Query: 96  DLSDSDL--QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH---GDDL-- 148
           DLS+ +   + L+G    +                      +A +F S  +   G DL  
Sbjct: 88  DLSEEEFATRYLSGATHFA----------------------KAKKFASQHYRKVGADLST 125

Query: 149 -PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            P A DWR +G ++ VK+QG C  CWAFSA+G +E+   +  ++L  LS Q
Sbjct: 126 APAAVDWREKGAVTPVKDQGMCGSCWAFSAIGNIESQWYLATHSLISLSEQ 176


>gi|2351557|gb|AAB68595.1| cathepsin [Choristoneura fumiferana MNPV]
          Length = 324

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 159/303 (52%), Gaps = 39/303 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQLTG 255
           + + +K YSS  + L R + F  N+E+  +    D+ +A + +NKF DLS+ + + + TG
Sbjct: 32  LHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDT-SAQYEINKFSDLSKDETISKYTG 90

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L+L          LQ     NQ   E+        R  D  P  FDWR    ++ VK QG
Sbjct: 91  LSL---------PLQ-----NQNFCEVVVLN----RPPDKGPLEFDWRRLNKVTSVKNQG 132

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGG 375
            C  CWAF+ +G +E+  AI+ + L  LS QQL+DCD  + GC+GG +  A + +++ GG
Sbjct: 133 TCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDMGCDGGLLHTAYEAVMNMGG 192

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPY   E+  G        F VKVK+  R     EE++K  + + GP+ V ++A
Sbjct: 193 IQAENDYPY---EANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDA 249

Query: 436 NGLFYYSGGVID------LNQR--LYGTS----IPYWIVKNSWGSDWGE----KVEDKVG 479
           + +  Y  G++       LN    L G +    +P+WI+KN+WG+DWGE    +V+  + 
Sbjct: 250 SDIVNYKRGIMKYCANHGLNHAVLLVGYAVQNGVPFWILKNTWGADWGEQGYFRVQQNIN 309

Query: 480 SSG 482
           + G
Sbjct: 310 ACG 312



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 90/156 (57%), Gaps = 12/156 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++L+DCD  + GC+GG +  A + +++ GG+ ++  YPY   E+  G      
Sbjct: 156 QLINLSEQQLIDCDFVDMGCDGGLLHTAYEAVMNMGGIQAENDYPY---EANNGDCRANA 212

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
             F VKVK+  R     EE++K  + + GP+ V ++A+ +  Y  G++    + C     
Sbjct: 213 AKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNYKRGIM----KYCANHGL 268

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           NHA+++VGY  +       +P+WI+KN+WG+DWGE+
Sbjct: 269 NHAVLLVGYAVQ-----NGVPFWILKNTWGADWGEQ 299



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 21/163 (12%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P + F +F+ + +K YSS  + L R + F  N+E+  +    D+ +A +E+NKF DL
Sbjct: 22  LKAP-SYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDT-SAQYEINKFSDL 79

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           S D  + + TGL+L          LQ     NQ   E+        R  D  P  FDWR 
Sbjct: 80  SKDETISKYTGLSL---------PLQ-----NQNFCEVVVLN----RPPDKGPLEFDWRR 121

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
              ++ VK QG C  CWAF+ +G +E+  AI+ + L  LS Q 
Sbjct: 122 LNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQ 164


>gi|18422289|ref|NP_568620.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|9757832|dbj|BAB08269.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|17065064|gb|AAL32686.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|21387153|gb|AAM47980.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|332007522|gb|AED94905.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 463

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 115/197 (58%), Gaps = 18/197 (9%)

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVD 350
           R GD LP++ DWR EG ++ VK+QG C  CWAFS +G VE ++ I    L  LS Q+LVD
Sbjct: 133 RVGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVD 192

Query: 351 CDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
           CD S N GCNGG MD A ++II NGG+ ++  YPYKA++    C    +    V +  Y 
Sbjct: 193 CDTSYNQGCNGGLMDYAFEFIIKNGGIDTEADYPYKAADGR--CDQNRKNAKVVTIDSYE 250

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID------LNQRL----YGT-- 455
            +P   E  +KK +A + P+SV + A G  +  YS GV D      L+  +    YGT  
Sbjct: 251 DVPENSEASLKKALAHQ-PISVAIEAGGRAFQLYSSGVFDGLCGTELDHGVVAVGYGTEN 309

Query: 456 SIPYWIVKNSWGSDWGE 472
              YWIV+NSWG+ WGE
Sbjct: 310 GKDYWIVRNSWGNRWGE 326



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 94/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ ++  YPYKA++  
Sbjct: 174 INKIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIIKNGGIDTEADYPYKAADGR 233

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P   E  +KK +A + P+SV + A G  +  YS GV D 
Sbjct: 234 --CDQNRKNAKVVTIDSYEDVPENSEASLKKALAHQ-PISVAIEAGGRAFQLYSSGVFD- 289

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              LC  +  +H ++ VGYG E  KD     YWIV+NSWG+ WGE
Sbjct: 290 --GLCGTEL-DHGVVAVGYGTENGKD-----YWIVRNSWGNRWGE 326



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%)

Query: 143 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           R GD LP++ DWR EG ++ VK+QG C  CWAFS +G VE ++ I   +L  LS Q
Sbjct: 133 RVGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQ 188


>gi|395852405|ref|XP_003798729.1| PREDICTED: cathepsin W [Otolemur garnettii]
          Length = 367

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 151/301 (50%), Gaps = 47/301 (15%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDS 260
           ++ YS+  +  RR + F  N+ KA+  Q ED GTA FG+    DL+E +  ++ G     
Sbjct: 50  NRSYSNPAEHSRRLDIFAHNLAKAQQLQEEDLGTAEFGMTSLSDLTEEEFGKIFGHQ--- 106

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE-GVISKVKEQGKCAC 319
                +   + P    +  +E         + G+ LP   DWR + G+IS++K Q  C C
Sbjct: 107 -----KAVGEVPRMGRKVGSE---------QQGETLPRTCDWRNKAGIISRIKNQENCKC 152

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWA +A   +EA+  I+ +   E+SVQ+L+DC+    GC GG + DA   +++N G+ S+
Sbjct: 153 CWAMAAADNIEALWGIKYHQSVEVSVQELLDCNRCGDGCQGGFVWDAFITVLNNSGLASE 212

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
           + YP+KAS     CL  +    KV   +   +    E ++ +++AT GP++V +N   L 
Sbjct: 213 KDYPFKASVKTHRCLANKYR--KVAWIQDFIMLEDNEHKIAQYLATHGPITVTINMKLLQ 270

Query: 440 YYSGGVID----------LNQRL----YGT-------------SIPYWIVKNSWGSDWGE 472
           +Y  GVI           +N  +    +G              S PYWI+KNSWG+ WGE
Sbjct: 271 HYKKGVIKAKPTTCDPQLVNHSVLLVGFGAETVSSQSHLRPHRSTPYWILKNSWGAHWGE 330

Query: 473 K 473
           +
Sbjct: 331 E 331



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 91/158 (57%), Gaps = 8/158 (5%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           ++ ++L+DC+    GC GG + DA   +++N G+ S++ YP+KAS     CL  +    K
Sbjct: 176 VSVQELLDCNRCGDGCQGGFVWDAFITVLNNSGLASEKDYPFKASVKTHRCLANKYR--K 233

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           V   +   +    E ++ +++AT GP++V +N   L +Y  GVI      C+P+  NH++
Sbjct: 234 VAWIQDFIMLEDNEHKIAQYLATHGPITVTINMKLLQHYKKGVIKAKPTTCDPQLVNHSV 293

Query: 621 IIVGYGEE------EKKDGTSIPYWIVKNSWGSDWGEK 652
           ++VG+G E        +   S PYWI+KNSWG+ WGE+
Sbjct: 294 LLVGFGAETVSSQSHLRPHRSTPYWILKNSWGAHWGEE 331



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F    ++ YS+  +  RR + F  N+ KA+  Q ED GTA F +    DL++ +  +
Sbjct: 42  FKLFQVQFNRSYSNPAEHSRRLDIFAHNLAKAQQLQEEDLGTAEFGMTSLSDLTEEEFGK 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE-GVISKV 163
           + G          +   + P    +  +E         + G+ LP   DWR + G+IS++
Sbjct: 102 IFGHQ--------KAVGEVPRMGRKVGSE---------QQGETLPRTCDWRNKAGIISRI 144

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K Q  C CCWA +A   +EA+  I+ +   E+SVQ
Sbjct: 145 KNQENCKCCWAMAAADNIEALWGIKYHQSVEVSVQ 179


>gi|394331816|gb|AFN27127.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 175/375 (46%), Gaps = 47/375 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y +V +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWRKKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E+  A+ G+ LT LS QQLV CD  + GC GG M  A ++++   NG + 
Sbjct: 150 CWAFSAVGSIESQWALAGHRLTALSEQQLVSCDDKDNGCAGGLMLQAFEWLLRNMNGTMF 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +S      C    +     ++  Y  I    E  M  W+A  GP+S+ ++A+
Sbjct: 210 TEDSYPYVSSTGYVPECSNSSQLVPGARIDGYLTIE-SSETVMAAWLAKNGPISIAVDAS 268

Query: 437 GLFYYSGGVID------LNQ--RLYGTS----IPYWIVKNSWGSDWGEK--VEDKVGSSG 482
               Y  GV+       LN    L G +    +PYW++KNSWG +WGE   V   +G + 
Sbjct: 269 SFMSYQSGVLTSCAGDALNHGVLLVGYNRTGEVPYWVIKNSWGENWGENGYVRVTMGVNA 328

Query: 483 NRTRDLELTGVLPSKLS-------------RLATEKLVDCDM-SNGGCNGGRMDDALQYI 528
               +  ++  +P   +             R+  E+++  DM    GC    +   + + 
Sbjct: 329 CLLTEYPVSAHVPQSPTPGPSTESEERAPKRVMVEQIICTDMYCREGCRKTLLTANVCHP 388

Query: 529 IDNGGVVSDQAYPYK 543
              GG    +  P+K
Sbjct: 389 NGGGGSSMTKCSPHK 403



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 13/158 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L+ L+ ++LV CD  + GC GG M  A ++++ N  G + ++ +YPY +S      C  
Sbjct: 169 RLTALSEQQLVSCDDKDNGCAGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSTGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             +     ++  Y  I    E  M  W+A  GP+S+ ++A+    Y  GV+      C  
Sbjct: 229 SSQLVPGARIDGYLTIE-SSETVMAAWLAKNGPISIAVDASSFMSYQSGVLTS----CAG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            A NH +++VGY    +     +PYW++KNSWG +WGE
Sbjct: 284 DALNHGVLLVGYNRTGE-----VPYWVIKNSWGENWGE 316



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 16/164 (9%)

Query: 37  YLNSPVTR-FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+ +P    F  F R + + Y +V +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGTPAAALFEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNP-HARFGITKFF 87

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           DLS+++      LN  +     +      +   + D                +P+A DWR
Sbjct: 88  DLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA-------------VPDAVDWR 133

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +G ++ VK+QG C  CWAFSAVG +E+  A+ G+ LT LS Q 
Sbjct: 134 KKGAVTPVKDQGACGSCWAFSAVGSIESQWALAGHRLTALSEQQ 177


>gi|343472324|emb|CCD15484.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 158/320 (49%), Gaps = 39/320 (12%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVTVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  PEA DWR +G ++ VK+QG+C  CWAFSA+G +E    + G+ LT LS Q LV
Sbjct: 124 ----GKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIGNIEGQWKVAGHELTSLSEQTLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKA-SESERGC-LVGEEEGFKVKV 405
            CD +   C GG MD+A ++II  + G V ++Q+YPY +   +   C + G+  G    +
Sbjct: 180 SCDPTEYACEGGFMDNAFRWIISSNKGKVFTEQSYPYSSGGRNVPACNMSGKVVG--ANI 237

Query: 406 KEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRLY------ 453
            +Y  +P  +E  + +W+A  GP+SV ++A     Y+GGV+       LN  +       
Sbjct: 238 SDYVDLPQ-DENAIAEWLAKNGPVSVIVDATSFQSYTGGVLTSCLSKILNHAVLLVGYDD 296

Query: 454 GTSIPYWIVKNSWGSDWGEK 473
            +  PYWI+KNSW   WGEK
Sbjct: 297 TSKPPYWIIKNSWSEKWGEK 316



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 16/160 (10%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKAS-ESERGC-L 552
           +L+ L+ + LV CD +   C GG MD+A ++II  + G V ++Q+YPY +   +   C +
Sbjct: 169 ELTSLSEQTLVSCDPTEYACEGGFMDNAFRWIISSNKGKVFTEQSYPYSSGGRNVPACNM 228

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCN 612
            G+  G    + +Y  +P  +E  + +W+A  GP+SV ++A     Y+GGV+      C 
Sbjct: 229 SGKVVG--ANISDYVDLPQ-DENAIAEWLAKNGPVSVIVDATSFQSYTGGVLTS----CL 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            K  NHA+++VGY +  K      PYWI+KNSW   WGEK
Sbjct: 282 SKILNHAVLLVGYDDTSKP-----PYWIIKNSWSEKWGEK 316



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                PEA DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVTVST-------------GKAPEAVDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFSA+G +E    + G+ LT LS Q
Sbjct: 142 KDQGQCGSCWAFSAIGNIEGQWKVAGHELTSLSEQ 176


>gi|225446585|ref|XP_002280215.1| PREDICTED: vignain [Vitis vinifera]
          Length = 341

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 47/307 (15%)

Query: 191 NLTELSV--QHHD------KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKF 242
           NL E S+  +H D      +VY   ++  +R++ F  NV + E +      +    +N+F
Sbjct: 29  NLLEASMYERHEDWMAQYGRVYKDADEKSKRYKIFKDNVARIESFNKAMDKSYKLSINEF 88

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
            DL+  + +                + +  F ++   TE  +F++    H   +P   DW
Sbjct: 89  ADLTNEEFR----------------ASRNRFKAHICSTEATSFKY---EHVAAVPSTVDW 129

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNG 360
           R +G ++ +K+QG+C  CWAFSAV  +E +  +    L  LS Q+LVDCD S  + GCNG
Sbjct: 130 RKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQGCNG 189

Query: 361 GRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMK 420
           G MDDA ++I  N G+ ++  YPY  ++    C   +      K+  Y  +P   E+ ++
Sbjct: 190 GLMDDAFKFIEQNHGLATEANYPYAGTDGT--CNRKKAAHPAAKINGYEDVPANNEKALQ 247

Query: 421 KWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNS 465
           K VA + P++V ++A G    +YS GV       +L+  +    YGTS   + YW+VKNS
Sbjct: 248 KAVAHQ-PIAVAIDAGGFEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKNS 306

Query: 466 WGSDWGE 472
           WG+ WGE
Sbjct: 307 WGTGWGE 313



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD S  + GCNGG MDDA ++I  N G+ ++  YPY  ++ 
Sbjct: 159 ITQLSTGKLISLSEQELVDCDTSGEDQGCNGGLMDDAFKFIEQNHGLATEANYPYAGTDG 218

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C   +      K+  Y  +P   E+ ++K VA + P++V ++A G    +YS GV  
Sbjct: 219 T--CNRKKAAHPAAKINGYEDVPANNEKALQKAVAHQ-PIAVAIDAGGFEFQFYSSGVFT 275

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                C  +  +H +  VGYG  +  DG  + YW+VKNSWG+ WGE
Sbjct: 276 GQ---CGTEL-DHGVAAVGYGTSD--DG--MKYWLVKNSWGTGWGE 313



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 29/184 (15%)

Query: 26  LLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSG 85
           LLE+++++          R  ++M  + +VY   ++  +R++ F  NV + E + +    
Sbjct: 30  LLEASMYE----------RHEDWMAQYGRVYKDADEKSKRYKIFKDNVARIESFNKAMDK 79

Query: 86  TAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG 145
           +    +N+F DL++ + +                + +  F ++   TE  +F++    H 
Sbjct: 80  SYKLSINEFADLTNEEFR----------------ASRNRFKAHICSTEATSFKY---EHV 120

Query: 146 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYS 205
             +P   DWR +G ++ +K+QG+C  CWAFSAV  +E +  +    L  LS Q      +
Sbjct: 121 AAVPSTVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDT 180

Query: 206 SVED 209
           S ED
Sbjct: 181 SGED 184


>gi|144905112|dbj|BAF56429.1| cysteine proteinase [Lotus japonicus]
          Length = 341

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 144/290 (49%), Gaps = 39/290 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           +DKVY    +  +R   F  NVE  E + +  +     GVN   DL              
Sbjct: 48  YDKVYKDAAEKEKRFLIFKDNVEFIESFNAAGNKPYKLGVNHLADL-------------- 93

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
            T+E+ + S      S   +    +F++ ++     +P + DWR +G ++ +K+QG+C  
Sbjct: 94  -TIEEFKASRNGLKRSYDYEVGTTSFKYENVTA---IPASVDWRKKGAVTPIKDQGQCGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNGGVV 377
           CWAFS V   E +H I    L  LS Q+LVDCD   ++ GC GG M+D  ++II NGG+ 
Sbjct: 150 CWAFSTVAATEGIHKISTGKLVSLSEQELVDCDRKGTDQGCEGGYMEDGFEFIIKNGGIT 209

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA-- 435
           ++  YPYKA +               ++K Y ++P   E+ + K VA + P+SV ++A  
Sbjct: 210 TEANYPYKAVDGS----CKNATAPAAQIKGYEKVPVNSEKALLKAVANQ-PVSVSIDAAD 264

Query: 436 NGLFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
               +YS G+       +L+  +    YG +    YWIVKNSWG+ WGE+
Sbjct: 265 GSFMFYSSGIFTGECGTELDHGVTAVGYGRANGTDYWIVKNSWGTVWGEQ 314



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 18/160 (11%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD   ++ GC GG M+D  ++II NGG+ ++  YPYKA +        
Sbjct: 169 KLVSLSEQELVDCDRKGTDQGCEGGYMEDGFEFIIKNGGITTEANYPYKAVDGS----CK 224

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
                  ++K Y ++P   E+ + K VA + P+SV ++A      +YS G+       C 
Sbjct: 225 NATAPAAQIKGYEKVPVNSEKALLKAVANQ-PVSVSIDAADGSFMFYSSGIFTGE---CG 280

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     D     YWIVKNSWG+ WGE+
Sbjct: 281 TEL-DHGVTAVGYGRANGTD-----YWIVKNSWGTVWGEQ 314



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 18/160 (11%)

Query: 39  NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLS 98
            S + R   +M  +DKVY    +  +R   F  NVE  E +    +      VN   DL 
Sbjct: 35  TSLIERHEQWMAKYDKVYKDAAEKEKRFLIFKDNVEFIESFNAAGNKPYKLGVNHLADL- 93

Query: 99  DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 158
                         T+E+ + S      S   +    +F++ ++     +P + DWR +G
Sbjct: 94  --------------TIEEFKASRNGLKRSYDYEVGTTSFKYENVTA---IPASVDWRKKG 136

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            ++ +K+QG+C  CWAFS V   E +H I    L  LS Q
Sbjct: 137 AVTPIKDQGQCGSCWAFSTVAATEGIHKISTGKLVSLSEQ 176


>gi|356542633|ref|XP_003539771.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 341

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H KVY    +  ++++ F+ NV++ E + +        G+N F DL+  + + +      
Sbjct: 45  HGKVYKHSYEKEQKYQIFMENVQRIEAFNNAGXKPYKLGINHFADLTNEEFKAIN----- 99

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                     +    S +T T    F++ ++     +P + DWR +G ++ +K+QG+C C
Sbjct: 100 --------RFKGHVCSKRTRTT--TFRYENV---TAVPASLDWRQKGAVTPIKDQGQCGC 146

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVV 377
           CWAFSAV   E +  ++   L  LS Q+LVDCD    + GC GG MDDA ++I+ N G+ 
Sbjct: 147 CWAFSAVAATEGITKLRTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFILQNKGLA 206

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++  YPY+  +    C    +      +K Y  +P   E  + K VA + P+SV + A+G
Sbjct: 207 TEAIYPYEGFDGT--CNAKADGNHAGSIKGYEDVPANSESALLKAVANQ-PVSVAIEASG 263

Query: 438 LF--YYSGGVI------DLNQRL----YGT---SIPYWIVKNSWGSDWGEK 473
               +YSGGV       +L+  +    YG       YW+VKNSWG  WGEK
Sbjct: 264 FKFQFYSGGVFTGSCGTNLDHGVTSVGYGVGDDGTKYWLVKNSWGVKWGEK 314



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD    + GC GG MDDA ++I+ N G+ ++  YPY+  + 
Sbjct: 159 ITKLRTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFILQNKGLATEAIYPYEGFDG 218

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVID 605
              C    +      +K Y  +P   E  + K VA + P+SV + A+G    +YSGGV  
Sbjct: 219 T--CNAKADGNHAGSIKGYEDVPANSESALLKAVANQ-PVSVAIEASGFKFQFYSGGVFT 275

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +   C     +H +  VGYG  +  DGT   YW+VKNSWG  WGEK
Sbjct: 276 GS---CGTNL-DHGVTSVGYGVGD--DGTK--YWLVKNSWGVKWGEK 314



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  H KVY    +  ++++ F+ NV++ E +           +N F DL++ + +
Sbjct: 37  RHEQWMATHGKVYKHSYEKEQKYQIFMENVQRIEAFNNAGXKPYKLGINHFADLTNEEFK 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            +                +    S +T T    F++ ++     +P + DWR +G ++ +
Sbjct: 97  AIN-------------RFKGHVCSKRTRTT--TFRYENV---TAVPASLDWRQKGAVTPI 138

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +  ++   L  LS Q
Sbjct: 139 KDQGQCGCCWAFSAVAATEGITKLRTGKLISLSEQ 173


>gi|18141283|gb|AAL60579.1|AF454957_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 460

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/197 (43%), Positives = 115/197 (58%), Gaps = 18/197 (9%)

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVD 350
           R GD +P++ DWR EG ++ VK+QG C  CWAFS +G VE ++ I    L  LS Q+LVD
Sbjct: 132 RVGDAIPDSVDWRKEGAVAAVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVD 191

Query: 351 CDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
           CD S N GCNGG MD A ++II NGG+ +++ YPYKA++    C    +    V +  Y 
Sbjct: 192 CDTSYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYKAADGR--CDQTRKNAKVVTIDAYE 249

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID------LNQRL----YGT-- 455
            +P   E  +KK +A + P+SV + A G  +  YS GV D      L+  +    YGT  
Sbjct: 250 DVPENNEAALKKTLANQ-PISVAIEAGGRAFQLYSSGVFDGICGTELDHGVVAVGYGTEN 308

Query: 456 SIPYWIVKNSWGSDWGE 472
              YWIV+NSWG  WGE
Sbjct: 309 GKDYWIVRNSWGGSWGE 325



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 94/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ +++ YPYKA++  
Sbjct: 173 INKIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYKAADGR 232

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P   E  +KK +A + P+SV + A G  +  YS GV D 
Sbjct: 233 --CDQTRKNAKVVTIDAYEDVPENNEAALKKTLANQ-PISVAIEAGGRAFQLYSSGVFD- 288

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              +C  +  +H ++ VGYG E  KD     YWIV+NSWG  WGE
Sbjct: 289 --GICGTEL-DHGVVAVGYGTENGKD-----YWIVRNSWGGSWGE 325



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 143 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           R GD +P++ DWR EG ++ VK+QG C  CWAFS +G VE ++ I   +L  LS Q
Sbjct: 132 RVGDAIPDSVDWRKEGAVAAVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQ 187


>gi|260516678|gb|ACX43965.1| cysteine protease 1 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 146/294 (49%), Gaps = 43/294 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ + K YS  E    R   F  NVE    + +  + +   G+N+F DLS    ++  G 
Sbjct: 46  MKQYSKAYSHAE-FSSRFNQFKANVETIRLHNTLANASYTMGLNEFADLS---FEEFKGK 101

Query: 257 NLDSTLEDIQPSLQAPFS-SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
                       ++  F+ SN    E+ A            P + DWR    ++ +K+QG
Sbjct: 102 YFG------YKHVEREFARSNNLHQEVEA-----------APTSIDWRTSNAVTPIKDQG 144

Query: 316 KCACCWAFSAVGVVEAMHAIQG-NSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIID 372
           +C  CWAFSA G +E    +QG ++LT LS QQLVDC  S G  GCNGG MD A +YII 
Sbjct: 145 QCGSCWAFSATGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGDAGCNGGLMDYAFEYIIA 204

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           N G+ ++ AYPYK      G L  +     V +  Y  +  G+E  +   V T GP+SV 
Sbjct: 205 NKGICAESAYPYKG----VGGLCQKSCTKVVTISGYKDVASGDEASLLNAVGTVGPVSVA 260

Query: 433 MNAN--GLFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           + A+  G  +YS GV       +L+  +    YGT  S  YWIVKNSWG+ WGE
Sbjct: 261 IEADQAGFQFYSSGVFSGTCGHNLDHGVLAVGYGTTGSQDYWIVKNSWGTSWGE 314



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 91/173 (52%), Gaps = 19/173 (10%)

Query: 485 TRDLELTGVLPSK--LSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAY 540
           T  +E   VL  K  L+ L+ ++LVDC  S G  GCNGG MD A +YII N G+ ++ AY
Sbjct: 155 TGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGDAGCNGGLMDYAFEYIIANKGICAESAY 214

Query: 541 PYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFY 598
           PYK      G L  +     V +  Y  +  G+E  +   V T GP+SV + A+  G  +
Sbjct: 215 PYKG----VGGLCQKSCTKVVTISGYKDVASGDEASLLNAVGTVGPVSVAIEADQAGFQF 270

Query: 599 YSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           YS GV       C     +H ++ VGYG    +D     YWIVKNSWG+ WGE
Sbjct: 271 YSSGVFS---GTCGHNL-DHGVLAVGYGTTGSQD-----YWIVKNSWGTSWGE 314



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 23/157 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  FM+ + K YS  E    R   F  NVE    +    + +    +N+F DLS    ++
Sbjct: 42  FTAFMKQYSKAYSHAE-FSSRFNQFKANVETIRLHNTLANASYTMGLNEFADLS---FEE 97

Query: 105 LTGLNLDSTLEDIQPSLQAPFS-SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             G             ++  F+ SN    E+ A            P + DWR    ++ +
Sbjct: 98  FKGKYFG------YKHVEREFARSNNLHQEVEA-----------APTSIDWRTSNAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQG-NNLTELSVQH 199
           K+QG+C  CWAFSA G +E    +QG + LT LS Q 
Sbjct: 141 KDQGQCGSCWAFSATGSIEGAWVLQGKHTLTSLSEQQ 177


>gi|194352748|emb|CAQ00102.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 368

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 157/307 (51%), Gaps = 49/307 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTG 255
           V+ H K YS  E+  RR   F  NV +A  +Q+ D G A  GV  F DL+  + + +LTG
Sbjct: 54  VRRHGKEYSGPEEYARRLRVFAANVARAAAHQALDPG-ARHGVTPFSDLTREEFEARLTG 112

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L      + ++ + + P ++  T+ E+ A           LP +FDWR +G ++ VK QG
Sbjct: 113 LV--GAGDVLRSARRMPAAAPATEEEVAA-----------LPASFDWRDKGAVTDVKMQG 159

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMDDA 366
            C  CWAFS  G VE  + +    L +LS QQLVDCD +         N GC+GG M +A
Sbjct: 160 VCGSCWAFSTTGAVEGANFVATGKLLDLSEQQLVDCDHTCDAVAKTECNSGCSGGLMTNA 219

Query: 367 LQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATR 426
            +Y++ +GG++   AYPY  ++   G    +     V+V  ++ +P  +E++M+  +   
Sbjct: 220 YRYLMSSGGLMEQAAYPYTGAQ---GPCRFDRGKVAVRVANFTAVPL-DEDQMRAALVRG 275

Query: 427 GPLSVGMNANGLFYYSGGV----------IDLNQRLYGTSI-----------PYWIVKNS 465
           GPL+VG+NA  +  Y GGV          ++    L G              PYW++KNS
Sbjct: 276 GPLAVGLNAAFMQTYVGGVSCPLICPRAMVNHGVLLVGYGARGFSALRLGYRPYWLIKNS 335

Query: 466 WGSDWGE 472
           WG+ WGE
Sbjct: 336 WGAQWGE 342



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 27/175 (15%)

Query: 493 VLPSKLSRLATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 543
           V   KL  L+ ++LVDCD +         N GC+GG M +A +Y++ +GG++   AYPY 
Sbjct: 179 VATGKLLDLSEQQLVDCDHTCDAVAKTECNSGCSGGLMTNAYRYLMSSGGLMEQAAYPYT 238

Query: 544 ASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV 603
            ++   G    +     V+V  ++ +P  +E++M+  +   GPL+VG+NA  +  Y GGV
Sbjct: 239 GAQ---GPCRFDRGKVAVRVANFTAVPL-DEDQMRAALVRGGPLAVGLNAAFMQTYVGGV 294

Query: 604 IDLNQRLCNPKAQ-NHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGE 651
              +  L  P+A  NH +++VGYG      G S       PYW++KNSWG+ WGE
Sbjct: 295 ---SCPLICPRAMVNHGVLLVGYGAR----GFSALRLGYRPYWLIKNSWGAQWGE 342



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 15/160 (9%)

Query: 41  PVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDS 100
           P  +F  F+R H K YS  E+  RR   F  NV +A  +Q  D G A   V  F DL+  
Sbjct: 46  PEAQFAAFVRRHGKEYSGPEEYARRLRVFAANVARAAAHQALDPG-ARHGVTPFSDLTRE 104

Query: 101 DLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
           + + +LTGL      + ++ + + P ++  T+ E+ A           LP +FDWR +G 
Sbjct: 105 EFEARLTGLV--GAGDVLRSARRMPAAAPATEEEVAA-----------LPASFDWRDKGA 151

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++ VK QG C  CWAFS  G VE  + +    L +LS Q 
Sbjct: 152 VTDVKMQGVCGSCWAFSTTGAVEGANFVATGKLLDLSEQQ 191


>gi|302763109|ref|XP_002964976.1| hypothetical protein SELMODRAFT_83176 [Selaginella moellendorffii]
 gi|302763113|ref|XP_002964978.1| hypothetical protein SELMODRAFT_83554 [Selaginella moellendorffii]
 gi|300167209|gb|EFJ33814.1| hypothetical protein SELMODRAFT_83176 [Selaginella moellendorffii]
 gi|300167211|gb|EFJ33816.1| hypothetical protein SELMODRAFT_83554 [Selaginella moellendorffii]
          Length = 300

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 146/291 (50%), Gaps = 44/291 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           HDK YSS  +  RR   F   +   E + ++ + T   G+NKF DL+ ++ +    G   
Sbjct: 9   HDKSYSSDWEKARRLMVFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRANYVGKFK 68

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
               +D +P+          D ++ +           LP + DWR EG ++ +K+QG+C 
Sbjct: 69  PPRYQDRRPA-------KDVDVDVSS-----------LPTSLDWRQEGAVTPIKDQGQCG 110

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
            CWAFSA+  +E+ H +    L  LS QQL+DCD  + GC GG  DDA +++++NGGV +
Sbjct: 111 SCWAFSAIASIESAHFLATKELVSLSEQQLIDCDTVDQGCQGGFPDDAFKFVVENGGVTT 170

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKE---YSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           ++AYPY           G     K KV E   Y  +     + + K V ++ P++VG+  
Sbjct: 171 EEAYPYTG-------FAGSCNTNKNKVVEITGYKDVTKDSADALMKAV-SKTPVTVGICG 222

Query: 436 NGLFY--YSGGVID---LNQR-------LYGT--SIPYWIVKNSWGSDWGE 472
           +   +  Y  G++     N R        YGT   +PYWI+KNSWG+ WGE
Sbjct: 223 SDQNFQNYRSGILSGQCCNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGE 273



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 96/170 (56%), Gaps = 23/170 (13%)

Query: 488 LELTGVLPSK-LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASE 546
           +E    L +K L  L+ ++L+DCD  + GC GG  DDA +++++NGGV +++AYPY    
Sbjct: 121 IESAHFLATKELVSLSEQQLIDCDTVDQGCQGGFPDDAFKFVVENGGVTTEEAYPYTG-- 178

Query: 547 SERGCLVGEEEGFKVKVKE---YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSG 601
                  G     K KV E   Y  +     + + K V ++ P++VG+  +   +  Y  
Sbjct: 179 -----FAGSCNTNKNKVVEITGYKDVTKDSADALMKAV-SKTPVTVGICGSDQNFQNYRS 232

Query: 602 GVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           G+  L+ + CN  +++HA++++GYG E       +PYWI+KNSWG+ WGE
Sbjct: 233 GI--LSGQCCN--SRDHAVLVIGYGTE-----GGMPYWIIKNSWGTSWGE 273



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 19/156 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           F ++   HDK YSS  +  RR   F   +   E +  + + T    +NKF DL++++ + 
Sbjct: 2   FEDWAAKHDKSYSSDWEKARRLMVFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRA 61

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
              G       +D +P+          D ++ +           LP + DWR EG ++ +
Sbjct: 62  NYVGKFKPPRYQDRRPA-------KDVDVDVSS-----------LPTSLDWRQEGAVTPI 103

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG+C  CWAFSA+  +E+ H +    L  LS Q 
Sbjct: 104 KDQGQCGSCWAFSAIASIESAHFLATKELVSLSEQQ 139


>gi|125533982|gb|EAY80530.1| hypothetical protein OsI_35710 [Oryza sativa Indica Group]
          Length = 378

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 118/205 (57%), Gaps = 23/205 (11%)

Query: 289 SLRHG----DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELS 344
           S R+G    D+LP A DWR  G ++ +K+QG+C  CWAFSAV  VE ++ I+   L  LS
Sbjct: 132 SFRYGGDDEDNLPPAVDWRERGAVTGIKDQGQCGSCWAFSAVAAVEGVNKIKTGRLVTLS 191

Query: 345 VQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKV 403
            Q+LVDCD   N GC+GG MD A Q+I  NGG+ ++  YPY+A +    C   +     V
Sbjct: 192 EQELVDCDTGDNQGCDGGLMDYAFQFIKRNGGITTESNYPYRAEQGR--CNKAKASSHDV 249

Query: 404 KVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL--- 452
            +  Y  +P  +E  ++K VA + P++V + A+G    +YS GV       DL+  +   
Sbjct: 250 TIDGYEDVPANDESALQKAVANQ-PVAVAVEASGQDFQFYSEGVFTGECGTDLDHGVAAV 308

Query: 453 -YGTS---IPYWIVKNSWGSDWGEK 473
            YG +     YWIVKNSWG DWGE+
Sbjct: 309 GYGITRDGTKYWIVKNSWGEDWGER 333



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 92/169 (54%), Gaps = 17/169 (10%)

Query: 490 LTGVLPSKLSRLAT---EKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKAS 545
           + GV   K  RL T   ++LVDCD   N GC+GG MD A Q+I  NGG+ ++  YPY+A 
Sbjct: 176 VEGVNKIKTGRLVTLSEQELVDCDTGDNQGCDGGLMDYAFQFIKRNGGITTESNYPYRAE 235

Query: 546 ESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV 603
           +    C   +     V +  Y  +P  +E  ++K VA + P++V + A+G    +YS GV
Sbjct: 236 QGR--CNKAKASSHDVTIDGYEDVPANDESALQKAVANQ-PVAVAVEASGQDFQFYSEGV 292

Query: 604 IDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                  C     +H +  VGYG    +DGT   YWIVKNSWG DWGE+
Sbjct: 293 FTGE---CGTDL-DHGVAAVGYG--ITRDGTK--YWIVKNSWGEDWGER 333



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 4/62 (6%)

Query: 141 SLRHG----DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELS 196
           S R+G    D+LP A DWR  G ++ +K+QG+C  CWAFSAV  VE ++ I+   L  LS
Sbjct: 132 SFRYGGDDEDNLPPAVDWRERGAVTGIKDQGQCGSCWAFSAVAAVEGVNKIKTGRLVTLS 191

Query: 197 VQ 198
            Q
Sbjct: 192 EQ 193


>gi|91992514|gb|ABE72973.1| cathepsin L [Aedes aegypti]
          Length = 265

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 133/259 (51%), Gaps = 41/259 (15%)

Query: 237 FGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL 296
           +G+  F D++ ++ +Q TGL +    ++ +  +  P +  + D  M            +L
Sbjct: 2   YGITHFADMTSAEYRQRTGLVIPR--DEDRNHVGNPKA--EIDENM------------EL 45

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           PE+FDWR  G +S VK QG C  CWAFS VG +E +H I+   L E S Q+L+DCD  + 
Sbjct: 46  PESFDWRELGAVSPVKNQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQELLDCDAVDS 105

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
            C GG MDDA + I   GG+  +  YPY A + ++ C     E   V+VK    +P   E
Sbjct: 106 ACQGGYMDDAYKAIEKIGGLELESEYPYLA-KKQKTCHFNSTE-VHVRVKGAVDLP-KNE 162

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRL----------------------YG 454
             M +++   GP+S+G+NAN + +Y GG+    + L                      + 
Sbjct: 163 TAMAQYLVANGPISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEYPMFN 222

Query: 455 TSIPYWIVKNSWGSDWGEK 473
            ++PYWIVKNSWG  WGE+
Sbjct: 223 KTMPYWIVKNSWGPKWGEQ 241



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 4/156 (2%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L   + ++L+DCD  +  C GG MDDA + I   GG+  +  YPY A + ++ C     E
Sbjct: 89  LEEYSEQELLDCDAVDSACQGGYMDDAYKAIEKIGGLELESEYPYLAKK-QKTCHFNSTE 147

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
              V+VK    +P   E  M +++   GP+S+G+NAN + +Y GG+    + LC+ K  +
Sbjct: 148 -VHVRVKGAVDLP-KNETAMAQYLVANGPISIGLNANAMQFYRGGISHPWKPLCSKKNLD 205

Query: 618 HALIIVGYG-EEEKKDGTSIPYWIVKNSWGSDWGEK 652
           H ++IVGYG +E      ++PYWIVKNSWG  WGE+
Sbjct: 206 HGVLIVGYGVKEYPMFNKTMPYWIVKNSWGPKWGEQ 241



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 16/110 (14%)

Query: 89  FEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL 148
           + +  F D++ ++ +Q TGL +    ++ +  +  P +  + D  M            +L
Sbjct: 2   YGITHFADMTSAEYRQRTGLVIPR--DEDRNHVGNPKA--EIDENM------------EL 45

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           PE+FDWR  G +S VK QG C  CWAFS VG +E +H I+   L E S Q
Sbjct: 46  PESFDWRELGAVSPVKNQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQ 95


>gi|12805315|gb|AAH02125.1| Ctss protein [Mus musculus]
          Length = 340

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 134/237 (56%), Gaps = 32/237 (13%)

Query: 259 DSTLEDI---QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           D T E+I     +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG
Sbjct: 90  DMTNEEILCRMGALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQG 142

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----MSNGGCNGGRMDDALQYII 371
            C  CWAFSAVG +E    ++   L  LS Q LVDC       N GC GG M +A QYII
Sbjct: 143 SCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYII 202

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           DNGG+ +D +YPYKA + +  C    +         Y ++P+G+E+ +K+ VAT+GP+SV
Sbjct: 203 DNGGIEADASYPYKAMDEK--CHYNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSV 259

Query: 432 GMNA--NGLFYYSGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           G++A  +  F+Y  GV D       +N  +    YGT     YW+VKNSWG ++G++
Sbjct: 260 GIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQ 316



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 98/165 (59%), Gaps = 23/165 (13%)

Query: 497 KLSRLATEKLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           KL  L+ + LVDC       N GC GG M +A QYIIDNGG+ +D +YPYKA + +  C 
Sbjct: 166 KLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKAMDEK--CH 223

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRL 610
              +         Y ++P+G+E+ +K+ VAT+GP+SVG++A  +  F+Y  GV D     
Sbjct: 224 YNSKNR-AATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD----- 277

Query: 611 CNPKAQ---NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +P      NH +++VGYG  + KD     YW+VKNSWG ++G++
Sbjct: 278 -DPSCTGNVNHGVLVVGYGTLDGKD-----YWLVKNSWGLNFGDQ 316



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 10/92 (10%)

Query: 111 DSTLEDI---QPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           D T E+I     +L+ P  S +T T    F+  S R    LP+  DWR +G +++VK QG
Sbjct: 90  DMTNEEILCRMGALRIPRQSPKTVT----FRSYSNR---TLPDTVDWREKGCVTEVKYQG 142

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            C  CWAFSAVG +E    ++   L  LS Q+
Sbjct: 143 SCGACWAFSAVGALEGQLKLKTGKLISLSAQN 174


>gi|302816909|ref|XP_002990132.1| hypothetical protein SELMODRAFT_428615 [Selaginella moellendorffii]
 gi|300142145|gb|EFJ08849.1| hypothetical protein SELMODRAFT_428615 [Selaginella moellendorffii]
          Length = 358

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 145/293 (49%), Gaps = 42/293 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H +VY+ + +  RR + F  N E  E++  + + T   G+N F D++  + + L      
Sbjct: 41  HGRVYNGIGEKERRFQIFRDNAEYIEEHNRQVNQTYWLGLNNFADMTHDEFKAL------ 94

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                     + P S    +T    F++       +LP   DWR++G ++ VK QG C  
Sbjct: 95  ------YFGTKVPLS----NTIKSGFRYED---ATNLPLDTDWRSKGAVATVKNQGACGS 141

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS V  VE ++ I    L  LS Q+LVDCD   N GCNGG MD A ++II NGG+ S
Sbjct: 142 CWAFSTVAAVEGVNQIVTGELVSLSEQELVDCDKQKNQGCNGGLMDSAFEFIIQNGGLDS 201

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           +  YPYKA      C         V +  +  +P   E ++ K VA + P+SV + A+G 
Sbjct: 202 EADYPYKAVSGS--CDESRRNSHVVTIDGFEDVPAESEADLLKAVANQ-PVSVAIEASGR 258

Query: 439 FY--YSGGV------IDLNQRL----YGTS-------IPYWIVKNSWGSDWGE 472
            +  YSGGV       +L+  +    YGTS         YWIV+NSWG  WGE
Sbjct: 259 NFQLYSGGVYTGHCGYELDHGVVAVGYGTSKTPDGVATDYWIVRNSWGDAWGE 311



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 10/162 (6%)

Query: 493 VLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  +L  L+ ++LVDCD   N GCNGG MD A ++II NGG+ S+  YPYKA      C
Sbjct: 157 IVTGELVSLSEQELVDCDKQKNQGCNGGLMDSAFEFIIQNGGLDSEADYPYKAVSGS--C 214

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
                    V +  +  +P   E ++ K VA + P+SV + A+G  +  YSGGV   +  
Sbjct: 215 DESRRNSHVVTIDGFEDVPAESEADLLKAVANQ-PVSVAIEASGRNFQLYSGGVYTGH-- 271

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C  +  +H ++ VGYG  +  DG +  YWIV+NSWG  WGE
Sbjct: 272 -CGYEL-DHGVVAVGYGTSKTPDGVATDYWIVRNSWGDAWGE 311



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 19/151 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           +M DH +VY+ + +  RR + F  N E  E++ R+ + T    +N F D++  + + L  
Sbjct: 37  WMVDHGRVYNGIGEKERRFQIFRDNAEYIEEHNRQVNQTYWLGLNNFADMTHDEFKAL-- 94

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                         + P S    +T    F++       +LP   DWR++G ++ VK QG
Sbjct: 95  ----------YFGTKVPLS----NTIKSGFRYED---ATNLPLDTDWRSKGAVATVKNQG 137

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS V  VE ++ I    L  LS Q
Sbjct: 138 ACGSCWAFSTVAAVEGVNQIVTGELVSLSEQ 168


>gi|34223513|gb|AAQ62999.1| oil palm polygalacturonase allergen PEST472 [Elaeis guineensis]
          Length = 525

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 165/314 (52%), Gaps = 44/314 (14%)

Query: 185 HAIQGNNLTELSVQ--------HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTA 235
           H +QG   +E  ++         H +  +++ +  RR E F  NV   + + +  DSG  
Sbjct: 34  HGVQGLERSEEEMRLLYEGWLAKHGRADNALGEKERRFEIFKDNVRFIDAHNAAADSGHR 93

Query: 236 VF--GVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG 293
            F  G+N+F D++  + +        +     +P+     +   +D     +++N+   G
Sbjct: 94  SFRLGLNRFADMTNEEYR--------TVYLGTRPASHRRRARLGSDR----YRYNA---G 138

Query: 294 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM 353
           ++LPE+ DWR +G ++ VK+QG C  CWAFS +  VE ++ I    L  LS Q+LVDCD 
Sbjct: 139 EELPESVDWRDKGAVTTVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCDN 198

Query: 354 S-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG MD A ++II+NGG+ +++ YPYKA + +  C    +    V +  Y  +P
Sbjct: 199 GQNQGCNGGLMDYAFEFIINNGGIDTEEDYPYKARDGK--CDQYRKNAKVVSIDGYEDVP 256

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGV-----IDLNQRL----YGT--SIP 458
             +E+ ++K VA + P+SV + A G     Y+SG        DL+  +    YGT     
Sbjct: 257 VNDEKALQKAVANQ-PVSVAIEAGGREFQLYHSGIFTGRCGTDLDHGVVAVGYGTENGKD 315

Query: 459 YWIVKNSWGSDWGE 472
           YWIV+NSWG DWGE
Sbjct: 316 YWIVRNSWGGDWGE 329



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 17/166 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD   N GCNGG MD A ++II+NGG+ +++ YPYKA + +
Sbjct: 177 INKIVTGDLISLSEQELVDCDNGQNQGCNGGLMDYAFEFIINNGGIDTEEDYPYKARDGK 236

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVID 605
             C    +    V +  Y  +P  +E+ ++K VA + P+SV + A G     Y+SG    
Sbjct: 237 --CDQYRKNAKVVSIDGYEDVPVNDEKALQKAVANQ-PVSVAIEAGGREFQLYHSG---- 289

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +    C     +H ++ VGYG E  KD     YWIV+NSWG DWGE
Sbjct: 290 IFTGRCGTDL-DHGVVAVGYGTENGKD-----YWIVRNSWGGDWGE 329



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 18/157 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  ++  H +  +++ +  RR E F  NV   + +    DSG   F +  N+F D+++ +
Sbjct: 50  YEGWLAKHGRADNALGEKERRFEIFKDNVRFIDAHNAAADSGHRSFRLGLNRFADMTNEE 109

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +        +     +P+     +   +D     +++N+   G++LPE+ DWR +G ++
Sbjct: 110 YR--------TVYLGTRPASHRRRARLGSDR----YRYNA---GEELPESVDWRDKGAVT 154

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CWAFS +  VE ++ I   +L  LS Q
Sbjct: 155 TVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLSEQ 191


>gi|47779249|gb|AAT38521.1| cysteine protease [Bombyx mori NPV]
          Length = 323

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 164/338 (48%), Gaps = 47/338 (13%)

Query: 177 AVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           AV    A   ++  N  E  V   +K YSS  + LRR + F  N+ +  +    DS  A 
Sbjct: 12  AVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRH 292
           + +NKF DLS+ + + + TGL+L +  ++    +   Q P                    
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG----------------- 112

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
               P  FDWR    ++ VK QG C  CWAF+ +G +E+  AI+ N L  LS QQ++DCD
Sbjct: 113 ----PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD 168

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A +     GGV  +  YPY+A  +   C +   + F V+VK+  R  
Sbjct: 169 FVDAGCNGGLLHTAFEANCRMGGVQLESDYPYEADNN--NCRMNSNK-FLVQVKDCYRYI 225

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYW 460
              EE++K  +   GP+ + ++A  +  Y  G+I       LN  +    YG   +IPYW
Sbjct: 226 IVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIKYCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +V+  + + G R  +L  T V+
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRN-ELASTAVI 322



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A +     GGV  +  YPY+A  +   C +  
Sbjct: 154 NELINLSEQQMIDCDFVDAGCNGGLLHTAFEANCRMGGVQLESDYPYEADNN--NCRMNS 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  G+I    + C    
Sbjct: 212 NK-FLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII----KYCFNSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      +IPYW  KN+WG+DWGE
Sbjct: 267 LNHAVLLVGYGVE-----NNIPYWTFKNTWGTDWGE 297



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 27/159 (16%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLS-DSDLQ 103
           F  F+   +K YSS  + LRR + F  N+ +  +  + DS  A +E+NKF DLS D  + 
Sbjct: 28  FEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDS--AKYEINKFSDLSKDETIA 85

Query: 104 QLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
           + TGL+L +  ++    +   Q P                        P  FDWR    +
Sbjct: 86  KYTGLSLPTQTQNFCKVILLDQPPGKG---------------------PLEFDWRRLNKV 124

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + VK QG C  CWAF+ +G +E+  AI+ N L  LS Q 
Sbjct: 125 TSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQ 163


>gi|297826061|ref|XP_002880913.1| hypothetical protein ARALYDRAFT_481640 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326752|gb|EFH57172.1| hypothetical protein ARALYDRAFT_481640 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 347

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 146/292 (50%), Gaps = 35/292 (11%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGLNLD 259
           ++VYS   +   R   F  N+E  + +    + T    VN+F DL++ + +   TGL + 
Sbjct: 43  NRVYSDESEKRNRFNIFKKNLEFVQSFNMNKNITYKLDVNEFSDLTDEEFRATHTGLVVP 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQGKC 317
             +  I     +  SS++T            R+G+  D  E+ DWR EG ++ VK QG+C
Sbjct: 103 EEITGI-----STLSSDKTV---------PFRYGNVSDTGESMDWRQEGAVTPVKYQGRC 148

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGV 376
             CWAFSAV  VE +  I    L  LS QQL+DCD   N GC+GG M  A +YII N G+
Sbjct: 149 GGCWAFSAVAAVEGITKITKGELVSLSEQQLLDCDTDYNQGCHGGIMSKAFEYIIKNQGI 208

Query: 377 VSDQAYPYKASESERGCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
            ++  YPY+ S+            F+   +  Y  +P   EE + + V+ + P+SVG+  
Sbjct: 209 TTEDNYPYQESQQTCSSSTTLSSSFRAATISGYETVPMNNEEALLQAVSQQ-PVSVGIEG 267

Query: 436 N--GLFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
              G  +YSGG+       DL+  +    YG S     YW+VKNSWG  WGE
Sbjct: 268 TGAGFRHYSGGIFNGECGTDLHHAVTIVGYGMSEEGTKYWVVKNSWGETWGE 319



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 13/166 (7%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +T +   +L  L+ ++L+DCD   N GC+GG M  A +YII N G+ ++  YPY+ S+  
Sbjct: 163 ITKITKGELVSLSEQQLLDCDTDYNQGCHGGIMSKAFEYIIKNQGITTEDNYPYQESQQT 222

Query: 549 RGCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVID 605
                     F+   +  Y  +P   EE + + V+ + P+SVG+     G  +YSGG+ +
Sbjct: 223 CSSSTTLSSSFRAATISGYETVPMNNEEALLQAVSQQ-PVSVGIEGTGAGFRHYSGGIFN 281

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                C     +HA+ IVGYG  E  +GT   YW+VKNSWG  WGE
Sbjct: 282 GE---CGTDL-HHAVTIVGYGMSE--EGTK--YWVVKNSWGETWGE 319



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 91/186 (48%), Gaps = 20/186 (10%)

Query: 20  FMIKVAL-LESNIFQTRGYL--NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA 76
           F++ + L   +++  +RG L   SP+ +   +M   ++VYS   +   R   F  N+E  
Sbjct: 7   FILTIFLSYRTSLATSRGGLFEASPIEKHEQWMARFNRVYSDESEKRNRFNIFKKNLEFV 66

Query: 77  EDYQREDSGTAVFEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMR 135
           + +    + T   +VN+F DL+D + +   TGL +   +  I     +  SS++T     
Sbjct: 67  QSFNMNKNITYKLDVNEFSDLTDEEFRATHTGLVVPEEITGI-----STLSSDKTV---- 117

Query: 136 AFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLT 193
                  R+G+  D  E+ DWR EG ++ VK QG+C  CWAFSAV  VE +  I    L 
Sbjct: 118 -----PFRYGNVSDTGESMDWRQEGAVTPVKYQGRCGGCWAFSAVAAVEGITKITKGELV 172

Query: 194 ELSVQH 199
            LS Q 
Sbjct: 173 SLSEQQ 178


>gi|21489677|gb|AAM55195.1|AF412313_1 cathepsin L cysteine protease [Haemonchus contortus]
 gi|21483192|gb|AAL14224.1| cathepsin L [Haemonchus contortus]
          Length = 354

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/295 (36%), Positives = 151/295 (51%), Gaps = 48/295 (16%)

Query: 215 ENFVTNVEKAEDYQSEDS-GTAVF--GVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           E FV NV   E++  E   G   F  G+N+  DL  S  ++L G  +     D   SLQ 
Sbjct: 68  EAFVKNVIHIEEHNKEHRLGRKTFEMGLNEIADLPFSQYRKLNGYRMRRQFGD---SLQ- 123

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
              SN T   +    FN       +PE+ DWR EG+++ VK QG C  CWAFS+ G +E 
Sbjct: 124 ---SNGTKFLV---PFNV-----QIPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEG 172

Query: 332 MHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 389
            HA     L  LS Q LVDC     N GCNGG MD A +YI +N GV ++ +YPY   E+
Sbjct: 173 QHARATGKLVSLSEQNLVDCSTKYGNHGCNGGLMDLAFEYIKENHGVDTEDSYPYVGRET 232

Query: 390 ----ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSG 443
               +R  +  +++GF         +P G+EE +KK VAT+GP+S+ ++A    +  Y  
Sbjct: 233 KCHFKRNAVGADDKGF-------VDLPEGDEEALKKAVATQGPISIAIDAGHRSFQLYKK 285

Query: 444 GVI--------DLNQRL----YGT---SIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           GV         +L+  +    YGT   +  YW+VKNSWG  WGEK   ++  + N
Sbjct: 286 GVYFDEECSSEELDHGVLLVGYGTDPEAGDYWLVKNSWGPTWGEKGYIRIARNRN 340



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 94/164 (57%), Gaps = 21/164 (12%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES----ERG 550
           KL  L+ + LVDC     N GCNGG MD A +YI +N GV ++ +YPY   E+    +R 
Sbjct: 180 KLVSLSEQNLVDCSTKYGNHGCNGGLMDLAFEYIKENHGVDTEDSYPYVGRETKCHFKRN 239

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQ 608
            +  +++GF         +P G+EE +KK VAT+GP+S+ ++A    +  Y  GV    +
Sbjct: 240 AVGADDKGF-------VDLPEGDEEALKKAVATQGPISIAIDAGHRSFQLYKKGVYFDEE 292

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C+ +  +H +++VGYG     D  +  YW+VKNSWG  WGEK
Sbjct: 293 --CSSEELDHGVLLVGYG----TDPEAGDYWLVKNSWGPTWGEK 330



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 66/135 (48%), Gaps = 18/135 (13%)

Query: 67  ENFVTNVEKAEDYQREDS-GTAVFE--VNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           E FV NV   E++ +E   G   FE  +N+  DL  S  ++L G  +     D   SLQ 
Sbjct: 68  EAFVKNVIHIEEHNKEHRLGRKTFEMGLNEIADLPFSQYRKLNGYRMRRQFGD---SLQ- 123

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
              SN T   +    FN       +PE+ DWR EG+++ VK QG C  CWAFS+ G +E 
Sbjct: 124 ---SNGTKFLV---PFNV-----QIPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEG 172

Query: 184 MHAIQGNNLTELSVQ 198
            HA     L  LS Q
Sbjct: 173 QHARATGKLVSLSEQ 187


>gi|356515038|ref|XP_003526208.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 339

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 149/291 (51%), Gaps = 33/291 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + K+Y+   +  +R + F  NV+  E + +         +N+F DL   + +     
Sbjct: 41  MAQYGKLYTDAAEKEKRFQIFKNNVQFIESFNAAGDKPFNLSINQFADLHNEEFK----- 95

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              ++L ++Q       S  +T TE  +F++ S+     +P   DWR  G ++ +K+QG 
Sbjct: 96  ---ASLINVQKKE----SGVETATET-SFRYESI---TKIPVTMDWRKRGAVTPIKDQGN 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG-GCNGGRMDDALQYIIDNGG 375
           C  CWAFS V  +E +H I    L  LS Q+LVDC      GCN G  ++A +++  NGG
Sbjct: 145 CGSCWAFSIVAAIEGIHQITTGKLVSLSEQELVDCVKGKSEGCNFGYKEEAFEFVAKNGG 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + S+ +YPYKA  + + C+V +E     ++K Y  +P   E+ + K VA + P+SV ++A
Sbjct: 205 LASEISYPYKA--NNKTCMVKKETQGVAQIKGYENVPSNSEKALLKAVANQ-PVSVYIDA 261

Query: 436 NGLFYYSGGVID------LNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
             L +YS G+         N       YG +     YW+VKNSWG+ WGEK
Sbjct: 262 GALQFYSSGIFTGKCGTAPNHAATVIGYGKARGGAKYWLVKNSWGTKWGEK 312



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 12/161 (7%)

Query: 493 VLPSKLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   KL  L+ ++LVDC      GCN G  ++A +++  NGG+ S+ +YPYKA  + + C
Sbjct: 163 ITTGKLVSLSEQELVDCVKGKSEGCNFGYKEEAFEFVAKNGGLASEISYPYKA--NNKTC 220

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLC 611
           +V +E     ++K Y  +P   E+ + K VA + P+SV ++A  L +YS G+       C
Sbjct: 221 MVKKETQGVAQIKGYENVPSNSEKALLKAVANQ-PVSVYIDAGALQFYSSGIFTGK---C 276

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              A NHA  ++GYG    K      YW+VKNSWG+ WGEK
Sbjct: 277 GT-APNHAATVIGYG----KARGGAKYWLVKNSWGTKWGEK 312



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 16/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + K+Y+   +  +R + F  NV+  E +           +N+F DL + + +
Sbjct: 36  RHEKWMAQYGKLYTDAAEKEKRFQIFKNNVQFIESFNAAGDKPFNLSINQFADLHNEEFK 95

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   ++L ++Q       S  +T TE  +F++ S+     +P   DWR  G ++ +
Sbjct: 96  --------ASLINVQKKE----SGVETATET-SFRYESI---TKIPVTMDWRKRGAVTPI 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS V  +E +H I    L  LS Q
Sbjct: 140 KDQGNCGSCWAFSIVAAIEGIHQITTGKLVSLSEQ 174


>gi|343477225|emb|CCD11889.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 153/318 (48%), Gaps = 35/318 (11%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVNVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  P A DWR +G ++ VK+QG C  CWAFSA+G +E    + G+ LT LS Q LV
Sbjct: 124 ----GKAPPAVDWRKKGAVTPVKDQGACGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD ++ GC GG MD +LQ+I+  + G V + Q+YPY +   +        +    K+  
Sbjct: 180 SCDTTDYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPCNKSGKVVGAKISG 239

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----T 455
           +  +P  +E  + +W+A  GP+++ ++A     Y GGV        +D +  L G    +
Sbjct: 240 HINLPK-DENAIAEWLAKNGPVAIAVDATSFLGYKGGVLTSCISKGLDHDVLLVGYDDTS 298

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSW   WGE+
Sbjct: 299 KPPYWIIKNSWSKGWGEE 316



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVG 554
           +L+ L+ + LV CD ++ GC GG MD +LQ+I+  + G V + Q+YPY +   +      
Sbjct: 169 ELTSLSEQMLVSCDTTDYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPCNK 228

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
             +    K+  +  +P  +E  + +W+A  GP+++ ++A     Y GGV+      C  K
Sbjct: 229 SGKVVGAKISGHINLPK-DENAIAEWLAKNGPVAIAVDATSFLGYKGGVLT----SCISK 283

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H +++VGY +  K      PYWI+KNSW   WGE+
Sbjct: 284 GLDHDVLLVGYDDTSKP-----PYWIIKNSWSKGWGEE 316



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                P A DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVNVST-------------GKAPPAVDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFSA+G +E    + G+ LT LS Q
Sbjct: 142 KDQGACGSCWAFSAIGNIEGQWKVAGHELTSLSEQ 176


>gi|9631045|ref|NP_047715.1| cathepsin-like proteinase [Lymantria dispar MNPV]
 gi|13124028|sp|Q9YMP9.1|CATV_NPVLD RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|3822313|gb|AAC70264.1| cathepsin-like proteinase [Lymantria dispar MNPV]
          Length = 356

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 159/320 (49%), Gaps = 46/320 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEK--AEDYQSEDSGTAVFGVNKFFDLSESDL-QQL 253
           V++++K Y+S  +  +R+  F  N+ +  A++  + D  TA + +NKF DLS+S+L  + 
Sbjct: 60  VENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKF 119

Query: 254 TGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           TGL++   + +   ++   Q P                     D  P  FDWR +  ++ 
Sbjct: 120 TGLSIPERVSNFCKTIILNQPP---------------------DKGPLHFDWREQNKVTS 158

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYI 370
           +K QG C  CWAF+ +  VE+  A++ N L +LS QQL+DCD  + GCNGG +  A + I
Sbjct: 159 IKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCDSVDMGCNGGLLHTAFEEI 218

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           +  GGV ++  YP+      R C +     + V +    R     EE++K  +   GP+ 
Sbjct: 219 MRMGGVQTELDYPFVG--RNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIP 276

Query: 431 VGMNANGLFYYSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE----KV 474
           + ++A  +  Y  GVI       LN  +    YG    +PYW+ KN+WG DWGE    +V
Sbjct: 277 MAIDAADIVNYYRGVISSCENNGLNHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRV 336

Query: 475 EDKVGSSGNRTRDLELTGVL 494
              V + G    DL  T VL
Sbjct: 337 RQNVNACG-MVNDLASTAVL 355



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 11/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++L+DCD  + GCNGG +  A + I+  GGV ++  YP+      R C +  
Sbjct: 186 NRLIDLSEQQLIDCDSVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVG--RNRRCGLDR 243

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
              + V +    R     EE++K  +   GP+ + ++A  +  Y  GVI      C    
Sbjct: 244 HRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVIS----SCENNG 299

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E       +PYW+ KN+WG DWGE
Sbjct: 300 LNHAVLLVGYGVE-----NGVPYWVFKNTWGDDWGE 330



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 27/161 (16%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEK--AEDYQREDSGTAVFEVNKFFDLSDSDL 102
           F +F+ +++K Y+S  +  +R+  F  N+ +  A++    D  TA +++NKF DLS S+L
Sbjct: 56  FESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSEL 115

Query: 103 -QQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 158
             + TGL++   + +   ++   Q P                     D  P  FDWR + 
Sbjct: 116 IAKFTGLSIPERVSNFCKTIILNQPP---------------------DKGPLHFDWREQN 154

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            ++ +K QG C  CWAF+ +  VE+  A++ N L +LS Q 
Sbjct: 155 KVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQ 195


>gi|297791625|ref|XP_002863697.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309532|gb|EFH39956.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 463

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 115/197 (58%), Gaps = 18/197 (9%)

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVD 350
           R GD LP++ DWR EG ++ VK+QG C  CWAFS +G VE ++ I    L  LS Q+LVD
Sbjct: 133 RVGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVD 192

Query: 351 CDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
           CD S N GCNGG MD A ++II NGG+ ++  YPYKA++    C    +    V +  Y 
Sbjct: 193 CDTSYNQGCNGGLMDYAFEFIIKNGGIDTEADYPYKAADGR--CDQNRKNAKVVTIDSYE 250

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID------LNQRL----YGT-- 455
            +P   E  +KK +A + P+SV + A G  +  YS GV D      L+  +    YGT  
Sbjct: 251 DVPENSEASLKKALAHQ-PISVAIEAGGRAFQLYSSGVFDGICGTELDHGVVAVGYGTEN 309

Query: 456 SIPYWIVKNSWGSDWGE 472
              YWIV+NSWG+ WGE
Sbjct: 310 GKDYWIVRNSWGNRWGE 326



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 94/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ ++  YPYKA++  
Sbjct: 174 INKIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIIKNGGIDTEADYPYKAADGR 233

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P   E  +KK +A + P+SV + A G  +  YS GV D 
Sbjct: 234 --CDQNRKNAKVVTIDSYEDVPENSEASLKKALAHQ-PISVAIEAGGRAFQLYSSGVFD- 289

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              +C  +  +H ++ VGYG E  KD     YWIV+NSWG+ WGE
Sbjct: 290 --GICGTEL-DHGVVAVGYGTENGKD-----YWIVRNSWGNRWGE 326



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 37/56 (66%)

Query: 143 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           R GD LP++ DWR EG ++ VK+QG C  CWAFS +G VE ++ I   +L  LS Q
Sbjct: 133 RVGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQ 188


>gi|302142276|emb|CBI19479.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 134/244 (54%), Gaps = 25/244 (10%)

Query: 276 NQTDTEMRAFQFN---SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAM 332
           ++ + E R ++ +   + R GD LPE+ DWR +G + +VK+QG C  CWAFS +  VE +
Sbjct: 36  DEHNAENRTYKISDRYAFRVGDSLPESVDWRKKGAVVEVKDQGSCGSCWAFSTIAAVEGI 95

Query: 333 HAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 391
           + I    L  LS Q+LVDCD S N GCNGG MD A ++II+NGG+ S++ YPYKAS+   
Sbjct: 96  NKIVTGGLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYKASDGR- 154

Query: 392 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID-- 447
            C    +    V +  Y  +P  +E+ ++K VA + P+SV + A G  +  Y  G+    
Sbjct: 155 -CDQYRKNAKVVTIDGYEDVPENDEKSLEKAVANQ-PVSVAIEAGGREFQLYQSGIFTGR 212

Query: 448 --------LNQRLYGT--SIPYWIVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGV 493
                   +    YGT   + YWIVKNSWG+ WGE    ++E  + +S      + +   
Sbjct: 213 CGTALDHGVTAVGYGTENGVDYWIVKNSWGASWGEEGYIRMERDLATSATGKCGIAMEAS 272

Query: 494 LPSK 497
            P K
Sbjct: 273 YPIK 276



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPYKAS+  
Sbjct: 95  INKIVTGGLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYKASDGR 154

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P  +E+ ++K VA + P+SV + A G  +  Y  G+   
Sbjct: 155 --CDQYRKNAKVVTIDGYEDVPENDEKSLEKAVANQ-PVSVAIEAGGREFQLYQSGI--F 209

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             R     A +H +  VGYG E   D     YWIVKNSWG+ WGE+
Sbjct: 210 TGRC--GTALDHGVTAVGYGTENGVD-----YWIVKNSWGASWGEE 248



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 20/146 (13%)

Query: 128 NQTDTEMRAFQFN---SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAM 184
           ++ + E R ++ +   + R GD LPE+ DWR +G + +VK+QG C  CWAFS +  VE +
Sbjct: 36  DEHNAENRTYKISDRYAFRVGDSLPESVDWRKKGAVVEVKDQGSCGSCWAFSTIAAVEGI 95

Query: 185 HAIQGNNLTELSVQHHDKVYSSVED-----LLRRHENFVTN---VEKAEDYQSEDS---- 232
           + I    L  LS Q      +S  +     L+     F+ N   ++  EDY  + S    
Sbjct: 96  NKIVTGGLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYKASDGRC 155

Query: 233 -----GTAVFGVNKFFDLSESDLQQL 253
                   V  ++ + D+ E+D + L
Sbjct: 156 DQYRKNAKVVTIDGYEDVPENDEKSL 181


>gi|413951605|gb|AFW84254.1| hypothetical protein ZEAMMB73_933931 [Zea mays]
          Length = 423

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 146/295 (49%), Gaps = 35/295 (11%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +V+    +  RR   F  NV     +           +N+F D+   + +      
Sbjct: 92  QTHHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPYRLRLNRFGDMGREEFRSTFA-- 149

Query: 258 LDSTLEDIQ----PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
            DS + D++    P+ +A          +  F ++S     D P + DWR EG ++ VK+
Sbjct: 150 -DSRINDLRRQDSPAARA--------GAVPGFMYDS---AADPPRSVDWRQEGAVTGVKD 197

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN 373
           QG C  CWAFS V  VE ++AI+  SL  LS Q+L+DCD    GC GG M++A ++I   
Sbjct: 198 QGHCGSCWAFSTVVAVEGINAIRTGSLASLSEQELIDCDTDENGCQGGLMENAFEFIKSF 257

Query: 374 GGVVSDQAYPYKASESE-RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           GG+ ++ AYPY+AS     G       G  V +  +  +P G E+ + K VA + P+SV 
Sbjct: 258 GGITTEAAYPYRASNGTCDGDRARRGGGVVVVIDGHQMVPAGSEDALAKAVAHQ-PVSVA 316

Query: 433 MNANG--LFYYSGGVI------DLNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           ++A G    +YS GV       DL+  +    YG      PYWIVKNSWG+ WGE
Sbjct: 317 VDAGGQAFQFYSEGVFTGDCGTDLDHGVAAVGYGVGDDGTPYWIVKNSWGTSWGE 371



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 16/167 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE- 548
           +  +    L+ L+ ++L+DCD    GC GG M++A ++I   GG+ ++ AYPY+AS    
Sbjct: 216 INAIRTGSLASLSEQELIDCDTDENGCQGGLMENAFEFIKSFGGITTEAAYPYRASNGTC 275

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI-- 604
            G       G  V +  +  +P G E+ + K VA + P+SV ++A G    +YS GV   
Sbjct: 276 DGDRARRGGGVVVVIDGHQMVPAGSEDALAKAVAHQ-PVSVAVDAGGQAFQFYSEGVFTG 334

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           D    L      +H +  VGYG  +  DGT  PYWIVKNSWG+ WGE
Sbjct: 335 DCGTDL------DHGVAAVGYGVGD--DGT--PYWIVKNSWGTSWGE 371



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 18/151 (11%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLD 111
           H +V+    +  RR   F  NV     + +         +N+F D+   + +       D
Sbjct: 94  HHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPYRLRLNRFGDMGREEFRSTFA---D 150

Query: 112 STLEDIQ----PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           S + D++    P+ +A          +  F ++S     D P + DWR EG ++ VK+QG
Sbjct: 151 SRINDLRRQDSPAARA--------GAVPGFMYDS---AADPPRSVDWRQEGAVTGVKDQG 199

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS V  VE ++AI+  +L  LS Q
Sbjct: 200 HCGSCWAFSTVVAVEGINAIRTGSLASLSEQ 230


>gi|357474527|ref|XP_003607548.1| Cysteine protease [Medicago truncatula]
 gi|358347211|ref|XP_003637653.1| Cysteine protease [Medicago truncatula]
 gi|355503588|gb|AES84791.1| Cysteine protease [Medicago truncatula]
 gi|355508603|gb|AES89745.1| Cysteine protease [Medicago truncatula]
          Length = 345

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 143/292 (48%), Gaps = 37/292 (12%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
           H+ KVY  +++   R + F  NV   E   S ++G      NK + L  +    LT    
Sbjct: 47  HYGKVYKDLQERENRLKIFKENVNYIE--ASNNAGN-----NKLYKLGINQFADLTNEEF 99

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
            ++    +  + +  +   T      F++ +      +P   DWR +G ++ VK QG+C 
Sbjct: 100 IASRNKFKGHMCSSITKTST------FKYENA----SVPSTVDWRKKGAVTPVKNQGQCG 149

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGV 376
           CCWAFSAV   E +H +    L  LS Q+LVDCD    + GC GG MDDA ++II N G+
Sbjct: 150 CCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGL 209

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPY+  +    C   +     V +  Y  +P   E+ ++K VA + P+SV ++A+
Sbjct: 210 NTEAQYPYQGVDGT--CSANKASIHAVTITGYEDVPANNEQALQKAVANQ-PISVAIDAS 266

Query: 437 G---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           G    FY SG            GV  +   +      YW+VKNSWG+DWGE+
Sbjct: 267 GSDFQFYKSGVFTGSCGTELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEE 318



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG MDDA ++II N G+ ++  YPY+  +    C   
Sbjct: 170 KLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQGVDGT--CSAN 227

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +     V +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 228 KASIHAVTITGYEDVPANNEQALQKAVANQ-PISVAIDASGSDFQFYKSGVFTGS---CG 283

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG+DWGE+
Sbjct: 284 TEL-DHGVTAVGYG--VGNDGT--KYWLVKNSWGTDWGEE 318



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 17/151 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           +M  + KVY  +++   R + F  NV   E     ++G      NK + L  +    LT 
Sbjct: 44  WMVHYGKVYKDLQERENRLKIFKENVNYIE--ASNNAGN-----NKLYKLGINQFADLTN 96

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
               ++    +  + +  +   T      F++ +      +P   DWR +G ++ VK QG
Sbjct: 97  EEFIASRNKFKGHMCSSITKTST------FKYENA----SVPSTVDWRKKGAVTPVKNQG 146

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +C CCWAFSAV   E +H +    L  LS Q
Sbjct: 147 QCGCCWAFSAVAATEGIHKLSTGKLVSLSEQ 177


>gi|164605519|dbj|BAF98585.1| CM0216.510.nc [Lotus japonicus]
          Length = 360

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 149/319 (46%), Gaps = 68/319 (21%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L  +HH         KVY S E+   R   F +N+ +A  +Q  D  +AV GV +F DL+
Sbjct: 39  LGAEHHFLEFKRRFGKVYVSEEEHGYRFNVFKSNMHRARRHQLLDP-SAVHGVTRFSDLT 97

Query: 247 ESDLQQ----LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
             + +     L G+ L S   D  P L+                       D+LP+ FDW
Sbjct: 98  PMEFRHSVLGLRGVGLPSD-ADSAPILRT----------------------DNLPKDFDW 134

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--------- 353
           R  G ++ VK QG C  CW+FSA G +E  H +    L  LS QQLVDCD          
Sbjct: 135 REHGAVTPVKNQGSCGACWSFSATGALEGAHFLSTGKLVSLSEQQLVDCDHECDPEEAGS 194

Query: 354 SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY 413
            + GC GG M+ A +YI++NGGV+ ++ YPY  +    G    ++      V  +S +  
Sbjct: 195 CDSGCKGGLMNSAFEYILNNGGVMREEDYPYSGTAG--GTCKFDQTKIAASVANFSVVSR 252

Query: 414 GEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI-------DLNQRL----YGT------- 455
            +E+++   +   GPL+V +NA  +  Y GGV         LN  +    YG+       
Sbjct: 253 -DEDQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYAPIR 311

Query: 456 --SIPYWIVKNSWGSDWGE 472
               PYWI+KNSWG +WGE
Sbjct: 312 MKQKPYWIIKNSWGENWGE 330



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 109/219 (49%), Gaps = 33/219 (15%)

Query: 447 DLNQRLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS-KLSRLAT 503
           D + R +G   P   VKN  S G+ W          S + T  LE    L + KL  L+ 
Sbjct: 131 DFDWREHGAVTP---VKNQGSCGACW----------SFSATGALEGAHFLSTGKLVSLSE 177

Query: 504 EKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           ++LVDCD           + GC GG M+ A +YI++NGGV+ ++ YPY  +    G    
Sbjct: 178 QQLVDCDHECDPEEAGSCDSGCKGGLMNSAFEYILNNGGVMREEDYPYSGTAG--GTCKF 235

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           ++      V  +S +   +E+++   +   GPL+V +NA  +  Y GGV      +C+ K
Sbjct: 236 DQTKIAASVANFSVVSR-DEDQIAANLVKNGPLAVAINAVYMQTYVGGVS--CPYVCSKK 292

Query: 615 AQNHALIIVGYGEEEKKD--GTSIPYWIVKNSWGSDWGE 651
             NH +++VGYG E          PYWI+KNSWG +WGE
Sbjct: 293 L-NHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGENWGE 330



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 72/159 (45%), Gaps = 28/159 (17%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            FL F R   KVY S E+   R   F +N+ +A  +Q  D  +AV  V +F DL+  + +
Sbjct: 44  HFLEFKRRFGKVYVSEEEHGYRFNVFKSNMHRARRHQLLDP-SAVHGVTRFSDLTPMEFR 102

Query: 104 Q----LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
                L G+ L S   D  P L+                       D+LP+ FDWR  G 
Sbjct: 103 HSVLGLRGVGLPSD-ADSAPILRT----------------------DNLPKDFDWREHGA 139

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ VK QG C  CW+FSA G +E  H +    L  LS Q
Sbjct: 140 VTPVKNQGSCGACWSFSATGALEGAHFLSTGKLVSLSEQ 178


>gi|149725427|ref|XP_001494683.1| PREDICTED: cathepsin W-like [Equus caballus]
          Length = 373

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 57/311 (18%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            +++ YSS  +   R + F  N+ +A+  Q +D GTA FGV+ F DL+E +  QL G   
Sbjct: 48  QYNRSYSSPAEYAHRLDIFARNLAQAQRLQEDDLGTAEFGVSPFSDLTEEEFGQLYGHR- 106

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW-RAEGVISKVKEQGKC 317
                  + +  AP    + ++E         +    +P+  DW +A GVIS VK Q  C
Sbjct: 107 -------RAAAGAPHVGRKVESE---------KWEKTVPQTCDWQKAAGVISSVKNQEMC 150

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
            CCWA +A G +EA+ AI  +   E+S+QQL+DCD    GC GG + DA   +++N G+ 
Sbjct: 151 NCCWAMAAAGNIEALWAITYHQSVEVSIQQLLDCDRCGNGCKGGFVWDAFLTVLNNSGLA 210

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVK-VKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           S++ YP++       C   + +  KV  ++++ R+P  +E+++ +++AT GP++V +N  
Sbjct: 211 SEKDYPFRGDAKPHRC---QAKKPKVAWIQDFIRLPE-DEQKIAEYLATHGPITVTINMK 266

Query: 437 GLFYYSGGVI------------DLNQRLYG----------------------TSIPYWIV 462
            L  Y  GVI            D +  L G                       S  YWI+
Sbjct: 267 LLQQYQKGVIKATPTTCDPQHLDHSVLLVGFGGGKSVEGRRPGAVSSQSRPRRSSSYWIL 326

Query: 463 KNSWGSDWGEK 473
           KNSWG+ WGE+
Sbjct: 327 KNSWGAKWGEE 337



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 95/166 (57%), Gaps = 18/166 (10%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           ++ ++L+DCD    GC GG + DA   +++N G+ S++ YP++       C   + +  K
Sbjct: 176 VSIQQLLDCDRCGNGCKGGFVWDAFLTVLNNSGLASEKDYPFRGDAKPHRC---QAKKPK 232

Query: 561 VK-VKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHA 619
           V  ++++ R+P  +E+++ +++AT GP++V +N   L  Y  GVI      C+P+  +H+
Sbjct: 233 VAWIQDFIRLPE-DEQKIAEYLATHGPITVTINMKLLQQYQKGVIKATPTTCDPQHLDHS 291

Query: 620 LIIVGYGEEEKKDG-------------TSIPYWIVKNSWGSDWGEK 652
           +++VG+G  +  +G              S  YWI+KNSWG+ WGE+
Sbjct: 292 VLLVGFGGGKSVEGRRPGAVSSQSRPRRSSSYWILKNSWGAKWGEE 337



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 18/156 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F   +++ YSS  +   R + F  N+ +A+  Q +D GTA F V+ F DL++ +  Q
Sbjct: 42  FTLFQIQYNRSYSSPAEYAHRLDIFARNLAQAQRLQEDDLGTAEFGVSPFSDLTEEEFGQ 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW-RAEGVISKV 163
           L G          + +  AP    + ++E         +    +P+  DW +A GVIS V
Sbjct: 102 LYGHR--------RAAAGAPHVGRKVESE---------KWEKTVPQTCDWQKAAGVISSV 144

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K Q  C CCWA +A G +EA+ AI  +   E+S+Q 
Sbjct: 145 KNQEMCNCCWAMAAAGNIEALWAITYHQSVEVSIQQ 180


>gi|218199600|gb|EEC82027.1| hypothetical protein OsI_25996 [Oryza sativa Indica Group]
          Length = 709

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 154/316 (48%), Gaps = 54/316 (17%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTG 255
           V+ H + YS  E+  RR   F  N+ +A  +Q+ D  TA  GV  F DL+  + + +LTG
Sbjct: 52  VRRHGREYSGPEEYARRLRVFAANLARAAAHQALDP-TARHGVTPFSDLTREEFEARLTG 110

Query: 256 LNLDSTLEDIQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
           L  D   +D++   L  P ++  T+ E+             LP +FDWR  G ++ VK Q
Sbjct: 111 LATDVGDDDVRRRRLPMPSAAPATEEEV-----------SGLPSSFDWRDRGAVTGVKMQ 159

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMDD 365
           G C  CWAFS  G VE  + +   +L +LS QQLVDCD +         + GC GG M +
Sbjct: 160 GACGSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCDAEKKTECDSGCGGGLMTN 219

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI-----PYGEE--EE 418
           A  Y++ +GG++   AYPY  ++   G    +     V+V  ++ +     P G +   +
Sbjct: 220 AYAYLMSSGGLMEQSAYPYTGAQ---GACRFDANRVAVRVANFTVVAPAAGPGGNDGDAQ 276

Query: 419 MKKWVATRGPLSVGMNANGLFYYSGGV-----------------IDLNQRLYGT----SI 457
           M+  +   GPL+VG+NA  +  Y GGV                 +   +R +        
Sbjct: 277 MRAALVRHGPLAVGLNAAYMQTYVGGVSCPLVCPRAWVNHGVLLVGYGERGFAALRLGHR 336

Query: 458 PYWIVKNSWGSDWGEK 473
           PYWI+KNSWG  WGE+
Sbjct: 337 PYWIIKNSWGKAWGEQ 352



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 27/172 (15%)

Query: 501 LATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           L+ ++LVDCD +         + GC GG M +A  Y++ +GG++   AYPY  ++   G 
Sbjct: 188 LSEQQLVDCDHTCDAEKKTECDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQ---GA 244

Query: 552 LVGEEEGFKVKVKEYSRI-----PYGE--EEEMKKWVATRGPLSVGMNANGLFYYSGGVI 604
              +     V+V  ++ +     P G   + +M+  +   GPL+VG+NA  +  Y GGV 
Sbjct: 245 CRFDANRVAVRVANFTVVAPAAGPGGNDGDAQMRAALVRHGPLAVGLNAAYMQTYVGGV- 303

Query: 605 DLNQRLCNPKA-QNHALIIVGYGEE---EKKDGTSIPYWIVKNSWGSDWGEK 652
             +  L  P+A  NH +++VGYGE      + G   PYWI+KNSWG  WGE+
Sbjct: 304 --SCPLVCPRAWVNHGVLLVGYGERGFAALRLGHR-PYWIIKNSWGKAWGEQ 352



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 14/161 (8%)

Query: 41  PVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDS 100
           P  +F  F+R H + YS  E+  RR   F  N+ +A  +Q  D  TA   V  F DL+  
Sbjct: 44  PEAQFAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQALDP-TARHGVTPFSDLTRE 102

Query: 101 DLQ-QLTGLNLDSTLEDIQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 158
           + + +LTGL  D   +D++   L  P ++  T+ E+             LP +FDWR  G
Sbjct: 103 EFEARLTGLATDVGDDDVRRRRLPMPSAAPATEEEV-----------SGLPSSFDWRDRG 151

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            ++ VK QG C  CWAFS  G VE  + +   NL +LS Q 
Sbjct: 152 AVTGVKMQGACGSCWAFSTTGAVEGANFLATGNLLDLSEQQ 192


>gi|146215984|gb|ABQ10194.1| actinidin Act2c [Actinidia arguta]
          Length = 378

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 155/301 (51%), Gaps = 42/301 (13%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           K Y+S+++   R E F  N+   +D+ ++ + +   G+N+F DL++ + +        ST
Sbjct: 51  KSYNSLDEKEMRFEIFKDNLRIIDDHNADANRSFSLGLNRFADLTDEEYR--------ST 102

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
               +   +A  S+               + GD LP   DWR  G +  VK QG C+ CW
Sbjct: 103 YLGFKSGPKAKVSNRYVP-----------KVGDVLPNYVDWRTVGAVVGVKNQGLCSSCW 151

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDC--DMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           AFSAV  VE ++ I   +L  LS Q+LVDC    S  GCN G M DA Q+II+NGG+ ++
Sbjct: 152 AFSAVAAVEGINKIMTGNLLSLSEQELVDCGRTQSTRGCNRGYMTDAFQFIINNGGINTE 211

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA---- 435
             YPY A + +  C    +    V + +Y  +P   E  ++  VA + P+SVG+ +    
Sbjct: 212 DNYPYTAQDGQ--CNRYLQNQKYVTIDDYENVPSNNEWALQNAVAHQ-PVSVGLESEGGK 268

Query: 436 -----NGLFY-YSGGVIDLNQRL--YGT--SIPYWIVKNSWGSDWGE----KVEDKVGSS 481
                +G+F  Y G  ID    +  YGT   + YWIVKNSWG++WGE    +++  +G +
Sbjct: 269 FKLYTSGIFTQYCGTAIDHGVTIVGYGTERGLDYWIVKNSWGTNWGENGYIRIQRNIGGA 328

Query: 482 G 482
           G
Sbjct: 329 G 329



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDC--DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  ++   L  L+ ++LVDC    S  GCN G M DA Q+II+NGG+ ++  YPY A + 
Sbjct: 162 INKIMTGNLLSLSEQELVDCGRTQSTRGCNRGYMTDAFQFIINNGGINTEDNYPYTAQDG 221

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
           +  C    +    V + +Y  +P   E  ++  VA + P+SVG+ + G     Y+ G+  
Sbjct: 222 Q--CNRYLQNQKYVTIDDYENVPSNNEWALQNAVAHQ-PVSVGLESEGGKFKLYTSGIF- 277

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              + C   A +H + IVGYG E   D     YWIVKNSWG++WGE
Sbjct: 278 --TQYCG-TAIDHGVTIVGYGTERGLD-----YWIVKNSWGTNWGE 315



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 19/154 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++ +  K Y+S+++   R E F  N+   +D+  + + +    +N+F DL+D + + 
Sbjct: 42  YESWLVEQGKSYNSLDEKEMRFEIFKDNLRIIDDHNADANRSFSLGLNRFADLTDEEYR- 100

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                  ST    +   +A  S+               + GD LP   DWR  G +  VK
Sbjct: 101 -------STYLGFKSGPKAKVSNRYVP-----------KVGDVLPNYVDWRTVGAVVGVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C+ CWAFSAV  VE ++ I   NL  LS Q
Sbjct: 143 NQGLCSSCWAFSAVAAVEGINKIMTGNLLSLSEQ 176


>gi|1163075|emb|CAA81061.1| cysteine proteinase [Trypanosoma congolense]
          Length = 442

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 153/318 (48%), Gaps = 35/318 (11%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 15  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRVFKQNMERAKE-EA 71

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 72  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVNVST--------- 118

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  P A DWR +G ++ VK+QG C  CWAFSA+G +E    + G+ LT LS Q LV
Sbjct: 119 ----GKAPPAVDWRKKGAVTPVKDQGACGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLV 174

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD ++ GC GG MD +LQ+I+  + G V + Q+YPY +   +        +    K+  
Sbjct: 175 SCDTTDYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPCNKSGKVVGAKISG 234

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----T 455
           +  +P  +E  + +W+A  GP+++ ++A     Y GGV        +D +  L G    +
Sbjct: 235 HINLPK-DENAIAEWLAKNGPVAIAVDATSFLGYKGGVLTSCISKGLDHDVLLVGYDDTS 293

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSW   WGE+
Sbjct: 294 KPPYWIIKNSWSKGWGEE 311



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVG 554
           +L+ L+ + LV CD ++ GC GG MD +LQ+I+  + G V + Q+YPY +   +      
Sbjct: 164 ELTSLSEQMLVSCDTTDYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPCNK 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
             +    K+  +  +P  +E  + +W+A  GP+++ ++A     Y GGV+      C  K
Sbjct: 224 SGKVVGAKISGHINLPK-DENAIAEWLAKNGPVAIAVDATSFLGYKGGVLT----SCISK 278

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H +++VGY +  K      PYWI+KNSW   WGE+
Sbjct: 279 GLDHDVLLVGYDDTSKP-----PYWIIKNSWSKGWGEE 311



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 35  QFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 93

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                P A DWR +G ++ V
Sbjct: 94  A----TYHNGAEYYAAALKRPRKVVNVST-------------GKAPPAVDWRKKGAVTPV 136

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFSA+G +E    + G+ LT LS Q
Sbjct: 137 KDQGACGSCWAFSAIGNIEGQWKVAGHELTSLSEQ 171


>gi|357474573|ref|XP_003607571.1| Cysteine proteinase EP-B [Medicago truncatula]
 gi|34329348|gb|AAQ63885.1| putative cysteine proteinase [Medicago truncatula]
 gi|355508626|gb|AES89768.1| Cysteine proteinase EP-B [Medicago truncatula]
          Length = 345

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 143/292 (48%), Gaps = 37/292 (12%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
           H+ KVY  +++   R + F  NV   E   S ++G      NK + L  +    LT    
Sbjct: 47  HYGKVYKDLQERENRLKIFKENVNYIE--ASNNAGN-----NKLYKLGINQFADLTNEEF 99

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
            ++    +  + +  +   T      F++ +      +P   DWR +G ++ VK QG+C 
Sbjct: 100 IASRNKFKGHMCSSITKTST------FKYENA----SVPSTVDWRKKGAVTPVKNQGQCG 149

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGV 376
           CCWAFSAV   E +H +    L  LS Q+LVDCD    + GC GG MDDA ++II N G+
Sbjct: 150 CCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGL 209

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPY+  +    C   +     V +  Y  +P   E+ ++K VA + P+SV ++A+
Sbjct: 210 NTEAQYPYQGVDGT--CSANKASIHAVTITGYEDVPANNEQALQKAVANQ-PISVAIDAS 266

Query: 437 G---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           G    FY SG            GV  +   +      YW+VKNSWG+DWGE+
Sbjct: 267 GSDFQFYKSGVFTGSCGTELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEE 318



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG MDDA ++II N G+ ++  YPY+  +    C   
Sbjct: 170 KLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQGVDGT--CSAN 227

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +     V +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 228 KASIHAVTITGYEDVPANNEQALQKAVANQ-PISVAIDASGSDFQFYKSGVFTGS---CG 283

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG+DWGE+
Sbjct: 284 TEL-DHGVTAVGYG--VGNDGT--KYWLVKNSWGTDWGEE 318



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 17/151 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           +M  + KVY  +++   R + F  NV   E     ++G      NK + L  +    LT 
Sbjct: 44  WMVHYGKVYKDLQERENRLKIFKENVNYIE--ASNNAGN-----NKLYKLGINQFADLTN 96

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
               ++    +  + +  +   T      F++ +      +P   DWR +G ++ VK QG
Sbjct: 97  EEFIASRNKFKGHMCSSITKTST------FKYENA----SVPSTVDWRKKGAVTPVKNQG 146

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +C CCWAFSAV   E +H +    L  LS Q
Sbjct: 147 QCGCCWAFSAVAATEGIHKLSTGKLVSLSEQ 177


>gi|71666430|ref|XP_820174.1| cysteine peptidase [Trypanosoma cruzi strain CL Brener]
 gi|70885508|gb|EAN98323.1| cysteine peptidase, putative [Trypanosoma cruzi]
          Length = 467

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 143/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P +                      P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYWI+KNSW + WGE    ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTAQWGEDGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYWI+KNSW + WGE
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWIIKNSWTAQWGE 312



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  + 
Sbjct: 36  SQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEF 94

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +     N  +     Q   + P +                      P A DWRA G ++ 
Sbjct: 95  RSRYH-NGAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTA 137

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 138 VKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|146215978|gb|ABQ10191.1| actinidin Act1c [Actinidia eriantha]
          Length = 368

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 151/303 (49%), Gaps = 41/303 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+S+ +  RR E F   +   +++ ++ S +   G+N+F DL+  + +        
Sbjct: 45  HGKSYNSLGERERRFEIFKETLRFIDEHNADTSRSYKVGLNQFADLTNEEFRSTY----- 99

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                    L     SN+T    R       R G  LP+  DWR+EG +  +K QG+C  
Sbjct: 100 ---------LGFTRGSNKTKVSNRY----EPRVGQVLPDYVDWRSEGAVVDIKNQGQCGS 146

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC--DMSNGGCNGGRMDDALQYIIDNGGVV 377
           CWAFSA+  VE ++ I   +L  LS Q+LVDC    S  GC+GG M D  ++II+NGG+ 
Sbjct: 147 CWAFSAIAAVEGINKIVTGNLISLSEQELVDCGRTQSTKGCDGGYMTDGFEFIINNGGIN 206

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +++ YPY A E +  C +  +    V +  Y  +PY  E  ++  VA + P+SV + + G
Sbjct: 207 TEENYPYTAQEGQ--CDLNLQNEKYVTIDNYENVPYYNEWALQTAVAYQ-PVSVALESAG 263

Query: 438 --LFYYSGGVID----------LNQRLYGT--SIPYWIVKNSWGSDWGE----KVEDKVG 479
               +YS G+            +    YGT   I YWIVKNSW + WGE    ++   VG
Sbjct: 264 DAFQHYSSGIFTGPCGTATDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVG 323

Query: 480 SSG 482
            +G
Sbjct: 324 GAG 326



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 16/164 (9%)

Query: 493 VLPSKLSRLATEKLVDC--DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           ++   L  L+ ++LVDC    S  GC+GG M D  ++II+NGG+ +++ YPY A E +  
Sbjct: 162 IVTGNLISLSEQELVDCGRTQSTKGCDGGYMTDGFEFIINNGGINTEENYPYTAQEGQ-- 219

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
           C +  +    V +  Y  +PY  E  ++  VA + P+SV + + G    +YS G+     
Sbjct: 220 CDLNLQNEKYVTIDNYENVPYYNEWALQTAVAYQ-PVSVALESAGDAFQHYSSGIF---T 275

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C   A +HA+ IVGYG E       I YWIVKNSW + WGE+
Sbjct: 276 GPCG-TATDHAVTIVGYGTE-----GGIDYWIVKNSWDTTWGEE 313



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 18/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++  H K Y+S+ +  RR E F   +   +++  + S +    +N+F DL++ + + 
Sbjct: 38  YESWLIKHGKSYNSLGERERRFEIFKETLRFIDEHNADTSRSYKVGLNQFADLTNEEFRS 97

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                           L     SN+T    R       R G  LP+  DWR+EG +  +K
Sbjct: 98  TY--------------LGFTRGSNKTKVSNRY----EPRVGQVLPDYVDWRSEGAVVDIK 139

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG+C  CWAFSA+  VE ++ I   NL  LS Q
Sbjct: 140 NQGQCGSCWAFSAIAAVEGINKIVTGNLISLSEQ 173


>gi|5231178|gb|AAD41105.1|AF157961_1 cysteine proteinase [Hypera postica]
          Length = 324

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 151/293 (51%), Gaps = 42/293 (14%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQS-EDSGTAVF--GVNKFFDLSESDLQQLTG 255
            H K Y +  +  +R   F  NV   E + +  + G   +  G+NKF D+S+ + + +  
Sbjct: 32  EHGKTYLNQAEESKRFNIFTDNVRAIEAHNALYEQGKVSYKKGINKFTDMSQEEFKTMLT 91

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L+        +P+L+                 + ++ G ++P + DWR EG ++ VK+QG
Sbjct: 92  LSASR-----KPTLETT---------------SYVKTGVEIPSSVDWRKEGRVTGVKDQG 131

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNG 374
            C  CWAFS  G  E  +A +   L  LS QQL+DC   ++ GC+GG +DD  +Y++ + 
Sbjct: 132 DCGSCWAFSITGSTEGAYARKSGKLVSLSEQQLIDCCTDTSAGCDGGSLDDNFKYVMKD- 190

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ S+++Y YK    E G           KV +Y+ IP  +E+ + + VAT GP+SVGM+
Sbjct: 191 GLQSEESYTYKG---EDGACKYNVASVVTKVSKYTSIPAEDEDALLEAVATVGPVSVGMD 247

Query: 435 ANGLFYYSGGVID--------LNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           A+ L  Y  G+ +        LN  +    YGT     YWI+KNSWG+ WGE+
Sbjct: 248 ASYLSSYDSGIYEDQDCSPAGLNHAILAVGYGTENGKDYWIIKNSWGASWGEQ 300



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 96/157 (61%), Gaps = 12/157 (7%)

Query: 497 KLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           KL  L+ ++L+DC   ++ GC+GG +DD  +Y++ +G + S+++Y YK    E G     
Sbjct: 155 KLVSLSEQQLIDCCTDTSAGCDGGSLDDNFKYVMKDG-LQSEESYTYKG---EDGACKYN 210

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                 KV +Y+ IP  +E+ + + VAT GP+SVGM+A+ L  Y  G+ +   + C+P  
Sbjct: 211 VASVVTKVSKYTSIPAEDEDALLEAVATVGPVSVGMDASYLSSYDSGIYE--DQDCSPAG 268

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NHA++ VGYG E  KD     YWI+KNSWG+ WGE+
Sbjct: 269 LNHAILAVGYGTENGKD-----YWIIKNSWGASWGEQ 300



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 29/183 (15%)

Query: 20  FMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           F + V  + ++I +  G       +F  F  +H K Y +  +  +R   F  NV   E +
Sbjct: 7   FSLLVVAISASISEELG------AKFQAFKLEHGKTYLNQAEESKRFNIFTDNVRAIEAH 60

Query: 80  QR-EDSGTAVFE--VNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRA 136
               + G   ++  +NKF D+S  + + +  L+        +P+L+              
Sbjct: 61  NALYEQGKVSYKKGINKFTDMSQEEFKTMLTLSASR-----KPTLETT------------ 103

Query: 137 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELS 196
              + ++ G ++P + DWR EG ++ VK+QG C  CWAFS  G  E  +A +   L  LS
Sbjct: 104 ---SYVKTGVEIPSSVDWRKEGRVTGVKDQGDCGSCWAFSITGSTEGAYARKSGKLVSLS 160

Query: 197 VQH 199
            Q 
Sbjct: 161 EQQ 163


>gi|244539471|dbj|BAH82657.1| cysteine protease [Lotus japonicus]
          Length = 286

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/273 (35%), Positives = 145/273 (53%), Gaps = 30/273 (10%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  H K+Y S+E+ L R E F  N+ K  D  ++       G+N+F DLS  + +
Sbjct: 7   LFESWMSRHGKIYESIEEKLLRFEIFKDNL-KHIDETNKVVSNYWLGLNEFADLSHHEFK 65

Query: 252 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            Q  GL +D             FS+ +  +E   F +  +    DLP++ DWR +G ++ 
Sbjct: 66  KQYLGLKVD-------------FSTRRESSE--EFTYRDV----DLPKSVDWRKKGAVTN 106

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           +K QG C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  +
Sbjct: 107 IKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNSGCNGGLMDYAFSF 166

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I++NGG+  +  YPY   E    C + +EE   V +  Y  +P   E+ + K +A + PL
Sbjct: 167 IVENGGLHKEDDYPYIMEEGT--CEMSKEESQVVTISGYHDVPQNNEQSLLKALANQ-PL 223

Query: 430 SVGMNANG--LFYYSGGVIDLNQRLYGTSIPYW 460
           SV + A+G    +YSGGV D +    GT +  W
Sbjct: 224 SVAIEASGRDFQFYSGGVFDGH---CGTQLASW 253



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 24/173 (13%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           ++  +  F ++M  H K+Y S+E+ L R E F  N++  ++  +  S   +  +N+F DL
Sbjct: 1   MDKLIELFESWMSRHGKIYESIEEKLLRFEIFKDNLKHIDETNKVVSNYWL-GLNEFADL 59

Query: 98  SDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           S  + + Q  GL +D             FS+ +  +E   F +  +    DLP++ DWR 
Sbjct: 60  SHHEFKKQYLGLKVD-------------FSTRRESSE--EFTYRDV----DLPKSVDWRK 100

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH---HDKVYSS 206
           +G ++ +K QG C  CWAFS V  VE ++ I   NLT LS Q     D+ Y+S
Sbjct: 101 KGAVTNIKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNS 153



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 6/119 (5%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DCD + N GCNGG MD A  +I++NGG+  +  YPY   E  
Sbjct: 128 INQIVTGNLTSLSEQELIDCDRTYNSGCNGGLMDYAFSFIVENGGLHKEDDYPYIMEEGT 187

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
             C + +EE   V +  Y  +P   E+ + K +A + PLSV + A+G    +YSGGV D
Sbjct: 188 --CEMSKEESQVVTISGYHDVPQNNEQSLLKALANQ-PLSVAIEASGRDFQFYSGGVFD 243


>gi|57118007|gb|AAW34135.1| cysteine protease gp2b [Zingiber officinale]
          Length = 379

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 142/289 (49%), Gaps = 40/289 (13%)

Query: 213 RHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGLNLDSTLEDIQPSL 269
           R E F  N++  + + +  D G   F  G+N+F DL               T E+ +   
Sbjct: 71  RLEVFKENLQFVDKHNAAADRGEHTFRLGMNRFADL---------------TNEEYRTRF 115

Query: 270 QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 329
              FS  +     +      LR GDDLP++ DWR +G +  VK QG C  CWAFS V  V
Sbjct: 116 LRDFSRLRRSASGKISSRYRLREGDDLPDSIDWREKGAVVPVKNQGGCGSCWAFSTVAAV 175

Query: 330 EAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 389
           E ++ I    L  LS QQLVDC  +N GC GG M+ A Q+I++NGG+ S++ YPY+    
Sbjct: 176 EGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETYPYRG--- 232

Query: 390 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGV-- 445
           + G          V +  Y  +P   E+ ++K VA + P+SV M+A G  +  Y  G+  
Sbjct: 233 QNGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQ-PVSVTMDAAGRDFQLYRSGIFT 291

Query: 446 ----IDLNQRL----YGTS--IPYWIVKNSWGSDWGE----KVEDKVGS 480
               I  N  L    YGT     Y  VKNSWG +WGE    +VE  +G+
Sbjct: 292 GSCNISANHALTVVGYGTENDKDYRTVKNSWGKNWGESGYIRVERNIGN 340



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 15/161 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           ++   L  L+ ++LVDC  +N GC GG M+ A Q+I++NGG+ S++ YPY+    + G  
Sbjct: 181 IVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETYPYRG---QNGIC 237

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRL 610
                   V +  Y  +P   E+ ++K VA + P+SV M+A G  +  Y  G+   +   
Sbjct: 238 NSTVNAPVVSIDSYENVPSHNEQSLQKAVANQ-PVSVTMDAAGRDFQLYRSGIFTGS--- 293

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           CN  A NHAL +VGYG E  KD     Y  VKNSWG +WGE
Sbjct: 294 CNISA-NHALTVVGYGTENDKD-----YRTVKNSWGKNWGE 328



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%)

Query: 142 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LR GDDLP++ DWR +G +  VK QG C  CWAFS V  VE ++ I   +L  LS Q 
Sbjct: 136 LREGDDLPDSIDWREKGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQ 193


>gi|449469929|ref|XP_004152671.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
 gi|449529596|ref|XP_004171784.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 431

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 151/296 (51%), Gaps = 38/296 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E+    H K YSS E+ L R   F  N E    + + D+ +    +N + DL+  + +
Sbjct: 28  LFEIWCTEHGKSYSSAEEKLYRLGVFADNYEFVTHHNNLDNSSYTLSLNSYADLTHHEFK 87

Query: 252 QLTGLNLDSTLEDIQPSL-QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
            ++ L     L + +P L Q P                SL    D+P++ DWR +G ++ 
Sbjct: 88  -VSRLGFSPALRNFRPVLPQEP----------------SLPR--DVPDSLDWRKKGAVTA 128

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK+QG C  CW+FSA G +E ++ I   SL  LS Q+L+DCD S N GC GG MD A Q+
Sbjct: 129 VKDQGSCGACWSFSATGAMEGINQIMTGSLISLSEQELIDCDRSYNSGCGGGLMDYAYQF 188

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           +I N G+ ++  YPY+A +    C   + +   V +  Y+ IP  +E ++ + VA + P+
Sbjct: 189 VISNHGIDTENDYPYQARDGS--CRKDKLQRNVVTIDGYADIPSNDEGKLLQAVAAQ-PV 245

Query: 430 SVGMNAN--GLFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWG 471
           SVG+  +      YS G+        L+  +    YG+   + YWIVKNSWG  WG
Sbjct: 246 SVGICGSERAFQLYSKGIFSGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGKSWG 301



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 90/161 (55%), Gaps = 15/161 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++L+DCD S N GC GG MD A Q++I N G+ ++  YPY+A +    C
Sbjct: 153 IMTGSLISLSEQELIDCDRSYNSGCGGGLMDYAYQFVISNHGIDTENDYPYQARDGS--C 210

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQR 609
              + +   V +  Y+ IP  +E ++ + VA + P+SVG+  +      YS G+      
Sbjct: 211 RKDKLQRNVVTIDGYADIPSNDEGKLLQAVAAQ-PVSVGICGSERAFQLYSKGIF---SG 266

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
            C+  + +HA++IVGYG E   D     YWIVKNSWG  WG
Sbjct: 267 PCS-TSLDHAVLIVGYGSENGVD-----YWIVKNSWGKSWG 301



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 23/166 (13%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  +  +H K YSS E+ L R   F  N E    +   D+ +    +N + DL+  + + 
Sbjct: 29  FEIWCTEHGKSYSSAEEKLYRLGVFADNYEFVTHHNNLDNSSYTLSLNSYADLTHHEFK- 87

Query: 105 LTGLNLDSTLEDIQPSL-QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           ++ L     L + +P L Q P                SL    D+P++ DWR +G ++ V
Sbjct: 88  VSRLGFSPALRNFRPVLPQEP----------------SLPR--DVPDSLDWRKKGAVTAV 129

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH---HDKVYSS 206
           K+QG C  CW+FSA G +E ++ I   +L  LS Q     D+ Y+S
Sbjct: 130 KDQGSCGACWSFSATGAMEGINQIMTGSLISLSEQELIDCDRSYNS 175


>gi|62320725|dbj|BAD95392.1| cysteine proteinase RD21A [Arabidopsis thaliana]
          Length = 433

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/276 (36%), Positives = 144/276 (52%), Gaps = 36/276 (13%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR E F  N+ +  D  +E + +   G+ +F DL+  + +      L + +E        
Sbjct: 71  RRFEIFKDNL-RFVDEHNEKNLSYRLGLTRFADLTNDEYRSKY---LGAKME-------- 118

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
                +  T +R       R GD+LPE+ DWR +G +++VK+QG C  CWAFS +G VE 
Sbjct: 119 --KKGERRTSLRY----EARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEG 172

Query: 332 MHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 390
           ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II NGG+ +D+ YPYK  +  
Sbjct: 173 INQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGT 232

Query: 391 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID- 447
             C    +    V +  Y  +P   EE +KK VA + P+S+ + A G  +  Y  G+ D 
Sbjct: 233 --CDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQ-PISIAIEAGGRAFQLYDSGIFDG 289

Query: 448 -----LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
                L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 290 SCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGE 325



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 15/166 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ +D+ YPYK  +    C
Sbjct: 176 IVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGT--C 233

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P   EE +KK VA + P+S+ + A G  +  Y  G+ D +  
Sbjct: 234 DQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQ-PISIAIEAGGRAFQLYDSGIFDGS-- 290

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
            C  +  +H ++ VGYG E  KD     YWIV+NSWG  WGE   L
Sbjct: 291 -CGTQL-DHGVVAVGYGTENGKD-----YWIVRNSWGKSWGESGYL 329



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 143 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           R GD+LPE+ DWR +G +++VK+QG C  CWAFS +G VE ++ I   +L  LS Q
Sbjct: 132 RVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQ 187


>gi|149751225|ref|XP_001490531.1| PREDICTED: cathepsin S-like [Equus caballus]
          Length = 332

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 118/198 (59%), Gaps = 21/198 (10%)

Query: 294 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM 353
           + LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++  +L  LS Q LVDC  
Sbjct: 114 EKLPDSLDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQNLVDCST 173

Query: 354 ---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 410
              SN GCNGG M  A QYIIDN G+ SD +YPYKA +   G    + +       +Y+ 
Sbjct: 174 EKYSNKGCNGGFMTAAFQYIIDNNGIDSDASYPYKAMD---GKCRYDSKNRAATCSKYTE 230

Query: 411 IPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--T 455
           +P+G E+++K+ VA +GP+SV ++A+    F Y  GV        ++N  +    YG   
Sbjct: 231 LPFGSEDDLKEAVANKGPVSVAIDASHPSFFLYKSGVYYDPSCTQNVNHGVLVVGYGNLN 290

Query: 456 SIPYWIVKNSWGSDWGEK 473
              YW+VKNSWG ++G+K
Sbjct: 291 GKDYWLVKNSWGINFGDK 308



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 103/199 (51%), Gaps = 26/199 (13%)

Query: 469 DWGEK---VEDKVGSSGNRTRDLELTGVLPSKLS-------RLATEKLVDCDM---SNGG 515
           DW EK    E K   S          G L ++L         L+ + LVDC     SN G
Sbjct: 121 DWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQNLVDCSTEKYSNKG 180

Query: 516 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 575
           CNGG M  A QYIIDN G+ SD +YPYKA +   G    + +       +Y+ +P+G E+
Sbjct: 181 CNGGFMTAAFQYIIDNNGIDSDASYPYKAMD---GKCRYDSKNRAATCSKYTELPFGSED 237

Query: 576 EMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDG 633
           ++K+ VA +GP+SV ++A+    F Y  GV       C     NH +++VGYG    KD 
Sbjct: 238 DLKEAVANKGPVSVAIDASHPSFFLYKSGV--YYDPSCTQNV-NHGVLVVGYGNLNGKD- 293

Query: 634 TSIPYWIVKNSWGSDWGEK 652
               YW+VKNSWG ++G+K
Sbjct: 294 ----YWLVKNSWGINFGDK 308



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 37/54 (68%)

Query: 146 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++  NL  LS Q+
Sbjct: 114 EKLPDSLDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQN 167


>gi|225443827|ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera]
          Length = 340

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 158/318 (49%), Gaps = 41/318 (12%)

Query: 173 WAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS 232
           WA  A+     +H +  +   E  +  + + Y  + +  RR + F  NVE  E   S  +
Sbjct: 18  WASQALS--RTLHEVSMSERHEDWMGLYGRTYKDIAEKERRFKIFKENVEYIESVNSAGN 75

Query: 233 GTAVFGVNKFFDLSESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 291
                 +N+F D +  + +    G N+               SS    +E+ +F++ ++ 
Sbjct: 76  RRYKLSINEFADQTNEEFKASRNGYNM---------------SSRPRSSEITSFRYENVA 120

Query: 292 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC 351
               +P + DWR +G ++ +K+QG+C CCWAFSAV  +E +  ++   L  LS Q+LVDC
Sbjct: 121 A---VPSSMDWRKKGAVTPIKDQGQCGCCWAFSAVAAMEGVTQLKTGELISLSEQELVDC 177

Query: 352 DMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
           D S  + GC GG MD A ++II NGG+ ++  YPYK  ++   C   +      K+K Y 
Sbjct: 178 DTSGEDQGCGGGLMDSAFEFIIGNGGLTTEANYPYKGVDAT--CNKKKAASSAAKIKNYE 235

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTS- 456
            +P   E  + K VA   P+SV ++A G    +YS GV       +L+  +    YG + 
Sbjct: 236 DVPANSEAALLKAVAQH-PVSVAIDAGGSDFQFYSSGVFTGQCGTELDHGVTAVGYGKTD 294

Query: 457 --IPYWIVKNSWGSDWGE 472
               YW+VKNSWG+ WGE
Sbjct: 295 DGTKYWLVKNSWGTGWGE 312



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   +L  L+ ++LVDCD S  + GC GG MD A ++II NGG+ ++  YPYK  ++
Sbjct: 158 VTQLKTGELISLSEQELVDCDTSGEDQGCGGGLMDSAFEFIIGNGGLTTEANYPYKGVDA 217

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C   +      K+K Y  +P   E  + K VA   P+SV ++A G    +YS GV  
Sbjct: 218 T--CNKKKAASSAAKIKNYEDVPANSEAALLKAVAQH-PVSVAIDAGGSDFQFYSSGVFT 274

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                C  +  +H +  VGYG+ +  DGT   YW+VKNSWG+ WGE
Sbjct: 275 GQ---CGTEL-DHGVTAVGYGKTD--DGT--KYWLVKNSWGTGWGE 312



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 19/167 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R  ++M  + + Y  + +  RR + F  NVE  E      +      +N+F D ++ + +
Sbjct: 35  RHEDWMGLYGRTYKDIAEKERRFKIFKENVEYIESVNSAGNRRYKLSINEFADQTNEEFK 94

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
               G N+               SS    +E+ +F++ ++     +P + DWR +G ++ 
Sbjct: 95  ASRNGYNM---------------SSRPRSSEITSFRYENVAA---VPSSMDWRKKGAVTP 136

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED 209
           +K+QG+C CCWAFSAV  +E +  ++   L  LS Q      +S ED
Sbjct: 137 IKDQGQCGCCWAFSAVAAMEGVTQLKTGELISLSEQELVDCDTSGED 183


>gi|195056367|ref|XP_001995082.1| GH22826 [Drosophila grimshawi]
 gi|193899288|gb|EDV98154.1| GH22826 [Drosophila grimshawi]
          Length = 340

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 154/301 (51%), Gaps = 46/301 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEK-AEDYQSEDSGTAVF--GVNKFFDLSESDLQQ-LTG 255
           H K Y    +   R + F  N  K A+  Q   +G   F  G+NK+ D+   +  + + G
Sbjct: 35  HRKQYQDETEERFRLKIFNENKHKIAKHNQLYAAGEVSFKMGLNKYADMLHHEFHETMNG 94

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
            N       +   L+A      +D       F S  H   LP++ DWR +G ++ VK+QG
Sbjct: 95  FNYT-----LHKQLRA------SDATFTGVTFISPEH-VKLPQSVDWRNKGAVTGVKDQG 142

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDN 373
            C  CWAFS+ G +E  H  +  +L  LS Q LVDC     N GCNGG MD+A +YI DN
Sbjct: 143 HCGSCWAFSSTGALEGQHFRKTGTLISLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDN 202

Query: 374 GGVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           GG+ ++++YPY+  +      +G +   + GF       + IP G+E+++ + VAT GP+
Sbjct: 203 GGIDTEKSYPYEGIDDSCHFNKGTIGATDRGF-------TDIPQGDEKKLAQAVATIGPV 255

Query: 430 SVGMNAN--GLFYYSGGVID--------LNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           SV ++A+     +YS GV D        L+  +    YGT      YW+VKNSWG+ WG+
Sbjct: 256 SVAIDASHESFQFYSTGVYDEPQCDPQNLDHGVLVVGYGTDENGKDYWLVKNSWGTTWGD 315

Query: 473 K 473
           K
Sbjct: 316 K 316



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 104/171 (60%), Gaps = 27/171 (15%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           TG L S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+  +  
Sbjct: 164 TGTLIS----LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDS 219

Query: 549 ----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGG 602
               +G +   + GF       + IP G+E+++ + VAT GP+SV ++A+     +YS G
Sbjct: 220 CHFNKGTIGATDRGF-------TDIPQGDEKKLAQAVATIGPVSVAIDASHESFQFYSTG 272

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEK-KDGTSIPYWIVKNSWGSDWGEK 652
           V D  Q  C+P+  +H +++VGYG +E  KD     YW+VKNSWG+ WG+K
Sbjct: 273 VYDEPQ--CDPQNLDHGVLVVGYGTDENGKD-----YWLVKNSWGTTWGDK 316



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 16/155 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSDLQQ 104
           F  +H K Y    +   R + F  N  K A+  Q   +G   F+  +NK+ D+   +  +
Sbjct: 31  FKLEHRKQYQDETEERFRLKIFNENKHKIAKHNQLYAAGEVSFKMGLNKYADMLHHEFHE 90

Query: 105 -LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            + G N       +   L+A      +D       F S  H   LP++ DWR +G ++ V
Sbjct: 91  TMNGFNYT-----LHKQLRA------SDATFTGVTFISPEH-VKLPQSVDWRNKGAVTGV 138

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS+ G +E  H  +   L  LS Q
Sbjct: 139 KDQGHCGSCWAFSSTGALEGQHFRKTGTLISLSEQ 173


>gi|413951606|gb|AFW84255.1| hypothetical protein ZEAMMB73_933931 [Zea mays]
          Length = 379

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 146/295 (49%), Gaps = 35/295 (11%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +V+    +  RR   F  NV     +           +N+F D+   + +      
Sbjct: 48  QTHHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPYRLRLNRFGDMGREEFRSTFA-- 105

Query: 258 LDSTLEDIQ----PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
            DS + D++    P+ +A          +  F ++S     D P + DWR EG ++ VK+
Sbjct: 106 -DSRINDLRRQDSPAARA--------GAVPGFMYDS---AADPPRSVDWRQEGAVTGVKD 153

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN 373
           QG C  CWAFS V  VE ++AI+  SL  LS Q+L+DCD    GC GG M++A ++I   
Sbjct: 154 QGHCGSCWAFSTVVAVEGINAIRTGSLASLSEQELIDCDTDENGCQGGLMENAFEFIKSF 213

Query: 374 GGVVSDQAYPYKASESE-RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           GG+ ++ AYPY+AS     G       G  V +  +  +P G E+ + K VA + P+SV 
Sbjct: 214 GGITTEAAYPYRASNGTCDGDRARRGGGVVVVIDGHQMVPAGSEDALAKAVAHQ-PVSVA 272

Query: 433 MNANG--LFYYSGGVI------DLNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           ++A G    +YS GV       DL+  +    YG      PYWIVKNSWG+ WGE
Sbjct: 273 VDAGGQAFQFYSEGVFTGDCGTDLDHGVAAVGYGVGDDGTPYWIVKNSWGTSWGE 327



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 16/167 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE- 548
           +  +    L+ L+ ++L+DCD    GC GG M++A ++I   GG+ ++ AYPY+AS    
Sbjct: 172 INAIRTGSLASLSEQELIDCDTDENGCQGGLMENAFEFIKSFGGITTEAAYPYRASNGTC 231

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI-- 604
            G       G  V +  +  +P G E+ + K VA + P+SV ++A G    +YS GV   
Sbjct: 232 DGDRARRGGGVVVVIDGHQMVPAGSEDALAKAVAHQ-PVSVAVDAGGQAFQFYSEGVFTG 290

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           D    L      +H +  VGYG  +  DGT  PYWIVKNSWG+ WGE
Sbjct: 291 DCGTDL------DHGVAAVGYGVGD--DGT--PYWIVKNSWGTSWGE 327



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 18/151 (11%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLD 111
           H +V+    +  RR   F  NV     + +         +N+F D+   + +       D
Sbjct: 50  HHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPYRLRLNRFGDMGREEFRSTFA---D 106

Query: 112 STLEDIQ----PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           S + D++    P+ +A          +  F ++S     D P + DWR EG ++ VK+QG
Sbjct: 107 SRINDLRRQDSPAARA--------GAVPGFMYDS---AADPPRSVDWRQEGAVTGVKDQG 155

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS V  VE ++AI+  +L  LS Q
Sbjct: 156 HCGSCWAFSTVVAVEGINAIRTGSLASLSEQ 186


>gi|14517542|gb|AAK62661.1| F2G19.31/F2G19.31 [Arabidopsis thaliana]
 gi|19548039|gb|AAL87383.1| F2G19.31/F2G19.31 [Arabidopsis thaliana]
          Length = 462

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/276 (36%), Positives = 144/276 (52%), Gaps = 36/276 (13%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR E F  N+ +  D  +E + +   G+ +F DL+  + +      L + +E        
Sbjct: 71  RRFEIFKDNL-RFVDEHNEKNLSYRLGLTRFADLTNDEYRSKY---LGAKME-------- 118

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
                +  T +R       R GD+LPE+ DWR +G +++VK+QG C  CWAFS +G VE 
Sbjct: 119 --KKGERRTSLRY----EARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEG 172

Query: 332 MHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 390
           ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II NGG+ +D+ YPYK  +  
Sbjct: 173 INQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGT 232

Query: 391 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID- 447
             C    +    V +  Y  +P   EE +KK VA + P+S+ + A G  +  Y  G+ D 
Sbjct: 233 --CDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQ-PISIAIEAGGRAFQLYDSGIFDG 289

Query: 448 -----LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
                L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 290 SCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGE 325



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 15/166 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ +D+ YPYK  +    C
Sbjct: 176 IVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGT--C 233

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P   EE +KK VA + P+S+ + A G  +  Y  G+ D +  
Sbjct: 234 DQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQ-PISIAIEAGGRAFQLYDSGIFDGS-- 290

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
            C  +  +H ++ VGYG E  KD     YWIV+NSWG  WGE   L
Sbjct: 291 -CGTQL-DHGVVAVGYGTENGKD-----YWIVRNSWGKSWGESGYL 329



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 143 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           R GD+LPE+ DWR +G +++VK+QG C  CWAFS +G VE ++ I   +L  LS Q
Sbjct: 132 RVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQ 187


>gi|213513816|ref|NP_001133678.1| Cathepsin F precursor [Salmo salar]
 gi|209154908|gb|ACI33686.1| Cathepsin F precursor [Salmo salar]
          Length = 475

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 140/291 (48%), Gaps = 38/291 (13%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            +++ YSS ED  RR   F  N++ AE  QS D GTA +GV KF DL+E + + L  LN 
Sbjct: 183 RYNRTYSSQEDTDRRLRIFHENLKTAEKLQSLDLGTAEYGVTKFSDLTEEEFRTLY-LN- 240

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                        P  S Q     R+ +  ++ HG   P ++DWR  G +S VK QG C 
Sbjct: 241 -------------PLLSQQK--LQRSMKPAAMPHGP-APPSWDWREHGAVSPVKNQGMCG 284

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
            CWAFS  G +E    ++   L  LS Q+LVDCD ++  C GG   +A + I   GGV +
Sbjct: 285 SCWAFSVTGNIEGQWFVKTGKLVSLSEQELVDCDTADQACGGGLPSNAYEAIEKLGGVET 344

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           +  Y Y   +        +   +     E S+    +E E+  W+A  GP+SV +NA  +
Sbjct: 345 ETDYSYTGKKQSCDFTTDKVTAYINSSVELSK----DENEIAAWLAENGPVSVALNAFAM 400

Query: 439 FYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
            +Y  GV            ID    L G       P+W +KNSWG D+GE+
Sbjct: 401 QFYRKGVSHPLKIFCNPWMIDHAVLLVGYGERQGKPFWAIKNSWGEDYGEQ 451



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 84/156 (53%), Gaps = 9/156 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD ++  C GG   +A + I   GGV ++  Y Y   +        + 
Sbjct: 305 KLVSLSEQELVDCDTADQACGGGLPSNAYEAIEKLGGVETETDYSYTGKKQSCDFTTDKV 364

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
             +     E S+    +E E+  W+A  GP+SV +NA  + +Y  GV    +  CNP   
Sbjct: 365 TAYINSSVELSK----DENEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMI 420

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +HA+++VGYGE + K     P+W +KNSWG D+GE+
Sbjct: 421 DHAVLLVGYGERQGK-----PFWAIKNSWGEDYGEQ 451



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 76/155 (49%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  FM  +++ YSS ED  RR   F  N++ AE  Q  D GTA + V KF DL++ + +
Sbjct: 176 QFKEFMVRYNRTYSSQEDTDRRLRIFHENLKTAEKLQSLDLGTAEYGVTKFSDLTEEEFR 235

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            L  LN              P  S Q     R+ +  ++ HG   P ++DWR  G +S V
Sbjct: 236 TLY-LN--------------PLLSQQK--LQRSMKPAAMPHGP-APPSWDWREHGAVSPV 277

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS  G +E    ++   L  LS Q
Sbjct: 278 KNQGMCGSCWAFSVTGNIEGQWFVKTGKLVSLSEQ 312


>gi|18401614|ref|NP_564497.1| cysteine proteinase RD21a [Arabidopsis thaliana]
 gi|1172873|sp|P43297.1|RD21A_ARATH RecName: Full=Cysteine proteinase RD21a; Short=RD21; Flags:
           Precursor
 gi|12321010|gb|AAG50628.1|AC083835_13 cysteine protease, putative [Arabidopsis thaliana]
 gi|435619|dbj|BAA02374.1| thiol protease [Arabidopsis thaliana]
 gi|18175926|gb|AAL59952.1| putative cysteine proteinase RD21A [Arabidopsis thaliana]
 gi|22136972|gb|AAM91715.1| putative cysteine proteinase RD21A [Arabidopsis thaliana]
 gi|332194014|gb|AEE32135.1| cysteine proteinase RD21a [Arabidopsis thaliana]
          Length = 462

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/276 (36%), Positives = 144/276 (52%), Gaps = 36/276 (13%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR E F  N+ +  D  +E + +   G+ +F DL+  + +      L + +E        
Sbjct: 71  RRFEIFKDNL-RFVDEHNEKNLSYRLGLTRFADLTNDEYRSKY---LGAKME-------- 118

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
                +  T +R       R GD+LPE+ DWR +G +++VK+QG C  CWAFS +G VE 
Sbjct: 119 --KKGERRTSLRY----EARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEG 172

Query: 332 MHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 390
           ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II NGG+ +D+ YPYK  +  
Sbjct: 173 INQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGT 232

Query: 391 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID- 447
             C    +    V +  Y  +P   EE +KK VA + P+S+ + A G  +  Y  G+ D 
Sbjct: 233 --CDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQ-PISIAIEAGGRAFQLYDSGIFDG 289

Query: 448 -----LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
                L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 290 SCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGE 325



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 15/166 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ +D+ YPYK  +    C
Sbjct: 176 IVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGT--C 233

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P   EE +KK VA + P+S+ + A G  +  Y  G+ D +  
Sbjct: 234 DQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQ-PISIAIEAGGRAFQLYDSGIFDGS-- 290

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
            C  +  +H ++ VGYG E  KD     YWIV+NSWG  WGE   L
Sbjct: 291 -CGTQL-DHGVVAVGYGTENGKD-----YWIVRNSWGKSWGESGYL 329



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 143 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           R GD+LPE+ DWR +G +++VK+QG C  CWAFS +G VE ++ I   +L  LS Q
Sbjct: 132 RVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQ 187


>gi|71406896|ref|XP_805951.1| cysteine peptidase [Trypanosoma cruzi strain CL Brener]
 gi|70869552|gb|EAN84100.1| cysteine peptidase, putative [Trypanosoma cruzi]
          Length = 426

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P                        P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC+GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYWI+KNSW + WGE+   ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGLN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D  ++PYWI+KNSW + WGE+
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWIIKNSWTTQWGEE 313



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 18/156 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  + 
Sbjct: 36  SQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEF 94

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +     N  +     Q   + P                        P A DWRA G ++ 
Sbjct: 95  RSRYH-NGAAHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVTA 137

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 138 VKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|13491750|gb|AAK27968.1|AF242372_1 cysteine protease [Ipomoea batatas]
          Length = 339

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 143/295 (48%), Gaps = 41/295 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTG 255
           +  + +VY +  +  +R   F  NVE  E +    +     G+N F DL+  + +    G
Sbjct: 41  MAQYGRVYKTEAEKTKRFNIFKENVEYIESFNKAGTKPYKLGINAFADLTNQEFKASRNG 100

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
             L        P                 F++ ++     +P   DWR +G ++ VK+QG
Sbjct: 101 YKLPHDCSSNTP-----------------FRYENV---SSVPTTVDWRTKGAVTPVKDQG 140

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDN 373
           +C CCWAFSAV  +E +  +   +L  LS Q+LVDCD+  ++ GC GG MDDA  +II+N
Sbjct: 141 QCGCCWAFSAVAAMEGITKLSTGNLISLSEQELVDCDVKGTDQGCEGGLMDDAFSFIINN 200

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++  YPY+ ++    C   +      K+  Y  +P   E  ++K VA + P+SV +
Sbjct: 201 KGLTTESNYPYQGTDGS--CKKSKSSNSAAKISGYEDVPANSESALEKAVANQ-PVSVAI 257

Query: 434 NANG--LFYYSGGV--------IDLNQRLYGTSIP-----YWIVKNSWGSDWGEK 473
           +A G    +YS GV        +D      G  I      YW+VKNSWG+ WGEK
Sbjct: 258 DAGGSDFQFYSSGVFTGECGTELDHGVTAVGYGIAEDGSKYWLVKNSWGTSWGEK 312



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +    L  L+ ++LVDCD+  ++ GC GG MDDA  +II+N G+ ++  YPY+ ++ 
Sbjct: 157 ITKLSTGNLISLSEQELVDCDVKGTDQGCEGGLMDDAFSFIINNKGLTTESNYPYQGTDG 216

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C   +      K+  Y  +P   E  ++K VA + P+SV ++A G    +YS GV  
Sbjct: 217 S--CKKSKSSNSAAKISGYEDVPANSESALEKAVANQ-PVSVAIDAGGSDFQFYSSGVFT 273

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H +  VGYG  E  DG+   YW+VKNSWG+ WGEK
Sbjct: 274 GE---CGTEL-DHGVTAVGYGIAE--DGSK--YWLVKNSWGTSWGEK 312



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 29/176 (16%)

Query: 32  FQTRGYLNSP--------VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRED 83
           F T  YL +         V R   +M  + +VY +  +  +R   F  NVE  E + +  
Sbjct: 16  FATSAYLATSRTLSDSLMVVRHEQWMAQYGRVYKTEAEKTKRFNIFKENVEYIESFNKAG 75

Query: 84  SGTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSL 142
           +      +N F DL++ + +    G  L        P                 F++ ++
Sbjct: 76  TKPYKLGINAFADLTNQEFKASRNGYKLPHDCSSNTP-----------------FRYENV 118

Query: 143 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
                +P   DWR +G ++ VK+QG+C CCWAFSAV  +E +  +   NL  LS Q
Sbjct: 119 ---SSVPTTVDWRTKGAVTPVKDQGQCGCCWAFSAVAAMEGITKLSTGNLISLSEQ 171


>gi|357477459|ref|XP_003609015.1| Cysteine proteinase [Medicago truncatula]
 gi|355510070|gb|AES91212.1| Cysteine proteinase [Medicago truncatula]
          Length = 345

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 143/294 (48%), Gaps = 36/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + KVY   ++   RH+ F  NV   E + ++ +       NK + L  +    LT  
Sbjct: 44  MSQYSKVYKDPQEREERHKIFTANVNYIEVFNNDAN-------NKLYKLGINQFADLTNE 96

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              ++    +  + +  +   T      F++ ++     +P   DWR +G ++ VK QG+
Sbjct: 97  EFIASRNKFKGHMCSSIAKTTT------FKYENVSA---IPSTVDWRKKGAVTPVKNQGQ 147

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV   E +  +    L  LS Q+LVDCD    + GC GG MDDA ++II N 
Sbjct: 148 CGCCWAFSAVAATEGITKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNH 207

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++ AYPY+  +    C   +       +  Y  +P   E+ ++K VA + P+SV ++
Sbjct: 208 GLSTEAAYPYQGVDGT--CNANKASIHAATITGYEDVPANNEQALQKAVANQ-PISVAID 264

Query: 435 ANG---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           A+G    FY SG            GV  +   +      YW+VKNSWG+DWGE+
Sbjct: 265 ASGSDFQFYKSGVFSGSCGTELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEE 318



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD    + GC GG MDDA ++II N G+ ++ AYPY+  + 
Sbjct: 163 ITKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLSTEAAYPYQGVDG 222

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C   +       +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y  GV  
Sbjct: 223 T--CNANKASIHAATITGYEDVPANNEQALQKAVANQ-PISVAIDASGSDFQFYKSGVFS 279

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +   C  +  +H +  VGYG     DGT   YW+VKNSWG+DWGE+
Sbjct: 280 GS---CGTEL-DHGVTAVGYG--VGNDGT--KYWLVKNSWGTDWGEE 318



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 16/180 (8%)

Query: 19  TFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAED 78
           TF+  + L    +      ++S   R   +M  + KVY   ++   RH+ F  NV   E 
Sbjct: 14  TFIFCLGLCAIQVTSRSLQVDSMYERHEQWMSQYSKVYKDPQEREERHKIFTANVNYIEV 73

Query: 79  YQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
           +  + +       NK + L  +    LT     ++    +  + +  +   T      F+
Sbjct: 74  FNNDAN-------NKLYKLGINQFADLTNEEFIASRNKFKGHMCSSIAKTTT------FK 120

Query: 139 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           + ++     +P   DWR +G ++ VK QG+C CCWAFSAV   E +  +    L  LS Q
Sbjct: 121 YENVSA---IPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGITKLSTGKLVSLSEQ 177


>gi|9627870|ref|NP_054157.1| viral cathepsin-like protein [Autographa californica
           nucleopolyhedrovirus]
 gi|114680178|ref|YP_758591.1| viral cathepsin [Plutella xylostella multiple nucleopolyhedrovirus]
 gi|115751|sp|P25783.1|CATV_NPVAC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|332491|gb|AAA46752.1| viral cathepsin [Autographa californica nucleopolyhedrovirus]
 gi|559196|gb|AAA66757.1| viral cathepsin-like protein [Autographa californica
           nucleopolyhedrovirus]
 gi|113015253|gb|ABE68510.1| viral cathepsin [Plutella xylostella multiple nucleopolyhedrovirus]
          Length = 323

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 164/338 (48%), Gaps = 49/338 (14%)

Query: 179 GVVE--AMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           GVV   A   ++  N  E  V   +K Y S  + LRR + F  N+ +  +    DS  A 
Sbjct: 12  GVVNSAAYDLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRH 292
           + +NKF DLS+ + + + TGL+L    ++    +   Q P                    
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKG----------------- 112

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
               P  FDWR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS QQ++DCD
Sbjct: 113 ----PLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCD 168

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A + II  GGV  +  YPY+A  +   C +   + F V+VK+  R  
Sbjct: 169 FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNSNK-FLVQVKDCYRYI 225

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYW 460
              EE++K  +   GP+ + ++A  +  Y  G+I       LN  +    YG   +IPYW
Sbjct: 226 TVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIKYCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +V+  + + G R  +L  T V+
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRN-ELASTAVI 322



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A + II  GGV  +  YPY+A  +   C +  
Sbjct: 154 NQLINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNS 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  G+I    + C    
Sbjct: 212 NK-FLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII----KYCFNSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      +IPYW  KN+WG+DWGE
Sbjct: 267 LNHAVLLVGYGVE-----NNIPYWTFKNTWGTDWGE 297



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 28/166 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P   F  F+   +K Y S  + LRR + F  N+ +  +  + DS  A +E+NKF DL
Sbjct: 22  LKAP-NYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQNDS--AKYEINKFSDL 78

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 153
           S D  + + TGL+L    ++    +   Q P                        P  FD
Sbjct: 79  SKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKG---------------------PLEFD 117

Query: 154 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           WR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS Q 
Sbjct: 118 WRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQ 163


>gi|144905116|dbj|BAF56430.1| cysteine proteinase [Lotus japonicus]
          Length = 341

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 146/293 (49%), Gaps = 37/293 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + KVY    +   R + F  NV++ E + +  + +   G+N+F DL+  + +     
Sbjct: 43  MAQYGKVYKDSYEKELRSKIFKENVQRIEAFNNAGNKSYKLGINQFADLTNEEFK----- 97

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                    +   +    SN T T    ++     H   +P + DWR +G ++ +K+QG+
Sbjct: 98  --------ARNRFKGHMCSNSTRTPTFKYE-----HVTSVPASLDWRQKGAVTPIKDQGQ 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV   E +  +    L  LS Q+LVDCD    + GC GG MDDA ++I+ N 
Sbjct: 145 CGCCWAFSAVAATEGITKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIMQNK 204

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPY+  ++   C    E      +K +  +P   E  + K VA + P+SV ++
Sbjct: 205 GLNTEAKYPYQGVDAT--CNANAEAKDAASIKGFEDVPANSESALLKAVANQ-PISVAID 261

Query: 435 ANG--LFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           A+G    +YS GV       +L+  +    YG+     YW+VKNSWG  WGE+
Sbjct: 262 ASGSEFQFYSSGVFTGSCGTELDHGVTAVGYGSDGGTKYWLVKNSWGEQWGEQ 314



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 16/167 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD    + GC GG MDDA ++I+ N G+ ++  YPY+  ++
Sbjct: 160 ITKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIMQNKGLNTEAKYPYQGVDA 219

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C    E      +K +  +P   E  + K VA + P+SV ++A+G    +YS GV  
Sbjct: 220 T--CNANAEAKDAASIKGFEDVPANSESALLKAVANQ-PISVAIDASGSEFQFYSSGVFT 276

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +   C  +  +H +  VGYG     DG +  YW+VKNSWG  WGE+
Sbjct: 277 GS---CGTEL-DHGVTAVGYGS----DGGT-KYWLVKNSWGEQWGEQ 314



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY    +   R + F  NV++ E +    + +    +N+F DL++ + +
Sbjct: 38  RHEQWMAQYGKVYKDSYEKELRSKIFKENVQRIEAFNNAGNKSYKLGINQFADLTNEEFK 97

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                         +   +    SN T T    ++     H   +P + DWR +G ++ +
Sbjct: 98  -------------ARNRFKGHMCSNSTRTPTFKYE-----HVTSVPASLDWRQKGAVTPI 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +  +    L  LS Q
Sbjct: 140 KDQGQCGCCWAFSAVAATEGITKLSTGKLISLSEQ 174


>gi|17569349|ref|NP_509408.1| Protein R09F10.1 [Caenorhabditis elegans]
 gi|351061560|emb|CCD69414.1| Protein R09F10.1 [Caenorhabditis elegans]
          Length = 383

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 153/293 (52%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +   D+ Y+SVE+   R++ F+ NV + E  +  + G  +  VN+F D ++ +LQ++   
Sbjct: 86  ILKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDL-DVNEFTDWTDEELQKMVQE 144

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           N                   + D +   F+ + L  G   P + DWR +G ++ +K QG+
Sbjct: 145 N----------------KYTKYDFDTPKFEGSYLETGVIRPASIDWREQGKLTPIKNQGQ 188

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAF+ V  VEA +AI+   L  LS Q++VDCD  N GC+GG    A++++ +N G+
Sbjct: 189 CGSCWAFATVASVEAQNAIKKGKLVSLSEQEMVDCDGRNNGCSGGYRPYAMKFVKEN-GL 247

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN-A 435
            S++ YPY A + ++ C + E +  +V + ++ R+    EE++  WV T+GP++ GMN  
Sbjct: 248 ESEKEYPYSALKHDQ-CFLKENDT-RVFIDDF-RMLSNNEEDIANWVGTKGPVTFGMNVV 304

Query: 436 NGLFYYSGGVI-----DLNQRLYGTSI------------PYWIVKNSWGSDWG 471
             ++ Y  G+      D  ++  G                YWIVKNSWG+ WG
Sbjct: 305 KAMYSYRSGIFNPSVEDCTEKSMGAHALTIIGYGGEGESAYWIVKNSWGTSWG 357



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 95/156 (60%), Gaps = 11/156 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ +++VDCD  N GC+GG    A++++ +N G+ S++ YPY A + ++ C + E 
Sbjct: 211 KLVSLSEQEMVDCDGRNNGCSGGYRPYAMKFVKEN-GLESEKEYPYSALKHDQ-CFLKEN 268

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN-ANGLFYYSGGVIDLNQRLCNPKA 615
           +  +V + ++ R+    EE++  WV T+GP++ GMN    ++ Y  G+ + +   C  K+
Sbjct: 269 DT-RVFIDDF-RMLSNNEEDIANWVGTKGPVTFGMNVVKAMYSYRSGIFNPSVEDCTEKS 326

Query: 616 QN-HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
              HAL I+GYG E    G S  YWIVKNSWG+ WG
Sbjct: 327 MGAHALTIIGYGGE----GES-AYWIVKNSWGTSWG 357



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 17/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F +F+   D+ Y+SVE+   R++ F+ NV + E  +  + G  + +VN+F D +D +LQ+
Sbjct: 82  FNDFILKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDL-DVNEFTDWTDEELQK 140

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +   N                   + D +   F+ + L  G   P + DWR +G ++ +K
Sbjct: 141 MVQEN----------------KYTKYDFDTPKFEGSYLETGVIRPASIDWREQGKLTPIK 184

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG+C  CWAF+ V  VEA +AI+   L  LS Q
Sbjct: 185 NQGQCGSCWAFATVASVEAQNAIKKGKLVSLSEQ 218


>gi|224079085|ref|XP_002305743.1| predicted protein [Populus trichocarpa]
 gi|222848707|gb|EEE86254.1| predicted protein [Populus trichocarpa]
          Length = 494

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 157/317 (49%), Gaps = 48/317 (15%)

Query: 185 HAIQGNNLTELSVQ------------HHDKVYSSVEDLLRRHENFVTNVEKA-EDYQSED 231
           ++I GN+ +EL                H K Y   E+  +R  NF  N++   E    E 
Sbjct: 23  YSIVGNDFSELPPDESIIEIFQQWRDRHQKAYKHAEEAEKRFGNFKRNLKYIIEKTGKET 82

Query: 232 SGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 291
           +     G+NKF DLS  + +QL               ++ P +  + D E R+ +  +L+
Sbjct: 83  TLRHRVGLNKFADLSNEEFKQL-----------YLSKVKKPINKTRIDAEDRSRR--NLQ 129

Query: 292 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC 351
             D  P + DWR +GV++ VK+QG C  CW+FS  G +E ++AI  + L  LS Q+LVDC
Sbjct: 130 SCD-APSSLDWRKKGVVTAVKDQGDCGSCWSFSTTGAIEGINAIVTSDLISLSEQELVDC 188

Query: 352 DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI 411
           D +N GC GG MD A +++I+NGG+ ++  YPY   +    C   +EE   V +  Y  +
Sbjct: 189 DTTNYGCEGGYMDYAFEWVINNGGIDTEANYPYTGVDGT--CNTAKEEIKVVSIDGYKDV 246

Query: 412 PYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRL-------------YGTS 456
              E +      A + P+SVG++ + + +  Y+GG+ D +                YG+ 
Sbjct: 247 --DETDSALLCAAAQQPISVGIDGSAIDFQLYTGGIYDGDCSDDPDDIDHAVLIVGYGSE 304

Query: 457 I--PYWIVKNSWGSDWG 471
               YWIVKNSWG+ WG
Sbjct: 305 NGEDYWIVKNSWGTSWG 321



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 12/163 (7%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  ++ S L  L+ ++LVDCD +N GC GG MD A +++I+NGG+ ++  YPY   +   
Sbjct: 169 INAIVTSDLISLSEQELVDCDTTNYGCEGGYMDYAFEWVINNGGIDTEANYPYTGVDGT- 227

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLN 607
            C   +EE   V +  Y  +   E +      A + P+SVG++ + + +  Y+GG+ D +
Sbjct: 228 -CNTAKEEIKVVSIDGYKDV--DETDSALLCAAAQQPISVGIDGSAIDFQLYTGGIYDGD 284

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
               +P   +HA++IVGYG E  +D     YWIVKNSWG+ WG
Sbjct: 285 CSD-DPDDIDHAVLIVGYGSENGED-----YWIVKNSWGTSWG 321



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 15/160 (9%)

Query: 40  SPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA-EDYQREDSGTAVFEVNKFFDLS 98
           S +  F  +   H K Y   E+  +R  NF  N++   E   +E +      +NKF DLS
Sbjct: 38  SIIEIFQQWRDRHQKAYKHAEEAEKRFGNFKRNLKYIIEKTGKETTLRHRVGLNKFADLS 97

Query: 99  DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 158
           + + +QL               ++ P +  + D E R+ +  +L+  D  P + DWR +G
Sbjct: 98  NEEFKQL-----------YLSKVKKPINKTRIDAEDRSRR--NLQSCD-APSSLDWRKKG 143

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           V++ VK+QG C  CW+FS  G +E ++AI  ++L  LS Q
Sbjct: 144 VVTAVKDQGDCGSCWSFSTTGAIEGINAIVTSDLISLSEQ 183


>gi|45822207|emb|CAE47500.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 326

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 150/294 (51%), Gaps = 43/294 (14%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTG 255
            ++K Y +  +  +R   F  ++ K E++  + D G + F  GV KF DL+E +   + G
Sbjct: 29  RNNKSYRNYIEEQKRFTIFQGSLRKIENHNDKYDHGLSTFKLGVTKFADLTEKEFSDMLG 88

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           ++                   ++    R    +SL    DLP  FDWR +G +++VK+QG
Sbjct: 89  IS-------------------RSTKSSRPRVIHSLTPVKDLPSKFDWREKGAVTEVKDQG 129

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG-GCNGGRMDDALQYIIDNG 374
            C  CW+FS  G VE  + ++   L  LS Q LVDC   +  GC+GG MD AL+YI   G
Sbjct: 130 SCGSCWSFSTTGTVEGAYFLKTGKLVSLSEQNLVDCAKEDCYGCSGGYMDKALEYIETAG 189

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G++S+  YPY+  + +  C   +      K+  ++ I   +E+++K  V  +GP+SV ++
Sbjct: 190 GIMSENDYPYEGIDDK--CRF-DSSKVAAKISNFTYIKKNDEDDLKNAVIAKGPISVAID 246

Query: 435 ANGLF-YYSGGVID----------LNQRL----YGTSIP--YWIVKNSWGSDWG 471
           A+  F  Y  G++D          LN  +    YGT     YWIVKNSWG+DWG
Sbjct: 247 ASFNFQLYDSGILDDSSCYSDFNSLNHGVLVVGYGTEKEQDYWIVKNSWGADWG 300



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 94/156 (60%), Gaps = 10/156 (6%)

Query: 497 KLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           KL  L+ + LVDC   +  GC+GG MD AL+YI   GG++S+  YPY+  + +  C   +
Sbjct: 153 KLVSLSEQNLVDCAKEDCYGCSGGYMDKALEYIETAGGIMSENDYPYEGIDDK--CRF-D 209

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF-YYSGGVIDLNQRLCNPK 614
                 K+  ++ I   +E+++K  V  +GP+SV ++A+  F  Y  G++D +    +  
Sbjct: 210 SSKVAAKISNFTYIKKNDEDDLKNAVIAKGPISVAIDASFNFQLYDSGILDDSSCYSDFN 269

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
           + NH +++VGYG E+++D     YWIVKNSWG+DWG
Sbjct: 270 SLNHGVLVVGYGTEKEQD-----YWIVKNSWGADWG 300



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 22/158 (13%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQ-REDSGTAVFE--VNKFFDLSDSD 101
           ++ F   ++K Y +  +  +R   F  ++ K E++  + D G + F+  V KF DL++ +
Sbjct: 23  WVQFKVRNNKSYRNYIEEQKRFTIFQGSLRKIENHNDKYDHGLSTFKLGVTKFADLTEKE 82

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
              + G++                   ++    R    +SL    DLP  FDWR +G ++
Sbjct: 83  FSDMLGIS-------------------RSTKSSRPRVIHSLTPVKDLPSKFDWREKGAVT 123

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +VK+QG C  CW+FS  G VE  + ++   L  LS Q+
Sbjct: 124 EVKDQGSCGSCWSFSTTGTVEGAYFLKTGKLVSLSEQN 161


>gi|1136308|gb|AAB41119.1| cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYGSAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTAFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P +                      P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYW++KNSW + WGE    ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWVIKNSWTTQWGEDGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYW++KNSW + WGE
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWVIKNSWTTQWGE 312



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  + 
Sbjct: 36  SQFAEFKQKHGRVYGSAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTAFSDLTREEF 94

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +     N  +     Q   + P +                      P A DWRA G ++ 
Sbjct: 95  RSRYH-NGAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTA 137

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 138 VKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|71663165|ref|XP_818579.1| cruzipain precursor [Trypanosoma cruzi strain CL Brener]
 gi|70883838|gb|EAN96728.1| cruzipain precursor, putative [Trypanosoma cruzi]
          Length = 467

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P                        P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC+GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDFGCSGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYWI+KNSW + WGE+   ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDFGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D  ++PYWI+KNSW + WGE+
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWIIKNSWTTQWGEE 313



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 18/157 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
            ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  +
Sbjct: 35  TSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREE 93

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +     N  +     Q   + P                        P A DWRA G ++
Sbjct: 94  FRSRYH-NGAAHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVT 136

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 137 AVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|302764466|ref|XP_002965654.1| hypothetical protein SELMODRAFT_230713 [Selaginella moellendorffii]
 gi|300166468|gb|EFJ33074.1| hypothetical protein SELMODRAFT_230713 [Selaginella moellendorffii]
          Length = 345

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 145/292 (49%), Gaps = 39/292 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +Q H K Y+S  +  +R + F  NV     + +  + +   G+NKF DL+ S+ + L   
Sbjct: 42  IQEHGKAYNSAHEYKKRFQIFKENVNYINSHNARRNNSHSLGLNKFADLTNSEFRGLYVG 101

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L            APF     D  + A          D   + DWR +G ++++K+QG 
Sbjct: 102 RLQRP---------APFHE-VGDIALVA----------DTATSVDWRKKGGVTEIKDQGD 141

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFSAV  VE +  +   +L  LS Q+LVDCD + N GC+GG MD A QY+I NGG
Sbjct: 142 CGSCWAFSAVAAVEGLTFLSTGTLVSLSEQELVDCDTTVNQGCDGGIMDYAFQYMIRNGG 201

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + S   YPY+A      C   + +     +  +  IP   EE + + VA + P+SV + A
Sbjct: 202 ITSQSNYPYRALRG--ACDKDKVKYHAATINGFQAIPPQSEELLLRAVANQ-PVSVAIEA 258

Query: 436 NGLFY--YSGGVI------DLNQRL----YGTSI---PYWIVKNSWGSDWGE 472
            G  +  YS GV       +L+  +    YGT      YW+VKNSWGS WGE
Sbjct: 259 GGQDFQLYSSGVFTGECGSNLDHGVAIVGYGTDAGGRQYWLVKNSWGSGWGE 310



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 14/165 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           LT +    L  L+ ++LVDCD + N GC+GG MD A QY+I NGG+ S   YPY+A    
Sbjct: 157 LTFLSTGTLVSLSEQELVDCDTTVNQGCDGGIMDYAFQYMIRNGGITSQSNYPYRALRG- 215

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C   + +     +  +  IP   EE + + VA + P+SV + A G  +  YS GV   
Sbjct: 216 -ACDKDKVKYHAATINGFQAIPPQSEELLLRAVANQ-PVSVAIEAGGQDFQLYSSGVFTG 273

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C     +H + IVGYG     D     YW+VKNSWGS WGE
Sbjct: 274 E---CGSNL-DHGVAIVGYG----TDAGGRQYWLVKNSWGSGWGE 310



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 20/154 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           +  ++++H K Y+S  +  +R + F  NV     +    + +    +NKF DL++S+ + 
Sbjct: 38  YQKWIQEHGKAYNSAHEYKKRFQIFKENVNYINSHNARRNNSHSLGLNKFADLTNSEFRG 97

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           L    L            APF     D  + A          D   + DWR +G ++++K
Sbjct: 98  LYVGRLQRP---------APFHE-VGDIALVA----------DTATSVDWRKKGGVTEIK 137

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAV  VE +  +    L  LS Q
Sbjct: 138 DQGDCGSCWAFSAVAAVEGLTFLSTGTLVSLSEQ 171


>gi|281209544|gb|EFA83712.1| cysteine proteinase 1 [Polysphondylium pallidum PN500]
          Length = 465

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 148/305 (48%), Gaps = 56/305 (18%)

Query: 200 HDKVYSSVEDLLRRHENFVTNV----EKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG 255
           ++K Y+S E    R   F +N+    EK  D  S  S +  FGVN+F DLS+S+ +  T 
Sbjct: 35  YNKQYTSSE-YAERFATFKSNLKVIDEKNRDAASRKS-SVRFGVNEFADLSQSEFRA-TY 91

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           LN    + D   ++ A                      +DLP AFDWR +G ++ VK QG
Sbjct: 92  LNSVQAVRDPNAAVAADLPV------------------EDLPTAFDWRTKGAVTGVKNQG 133

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD----------MSNGGCNGGRMDD 365
           +C  CW+FS  G VE    + GN+LT LS Q LVDCD          + + GCNGG   +
Sbjct: 134 QCGSCWSFSTTGNVEGQWFLAGNTLTGLSEQNLVDCDHECMEYLGDNVCDQGCNGGLQPN 193

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
           A  YII NGG+ ++ +YPY+  +   G    +      K+  ++ +    E +M  ++  
Sbjct: 194 AYTYIIKNGGIDTEASYPYQGVD---GTCSFKAANIGAKISNWTYVS-SNETQMAAYLVA 249

Query: 426 RGPLSVGMNANGLFYYSGGVIDL---NQRLYGTSI--------------PYWIVKNSWGS 468
            GPL++  +A    +Y GGV D+   N   +G  I               YWIVKNSWG+
Sbjct: 250 NGPLAIAADAVEWQFYLGGVFDVPCGNTLDHGILIVGYSAENTIFHKDKAYWIVKNSWGA 309

Query: 469 DWGEK 473
            WGE+
Sbjct: 310 TWGEQ 314



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 18/165 (10%)

Query: 498 LSRLATEKLVDCD----------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           L+ L+ + LVDCD          + + GCNGG   +A  YII NGG+ ++ +YPY+  + 
Sbjct: 158 LTGLSEQNLVDCDHECMEYLGDNVCDQGCNGGLQPNAYTYIIKNGGIDTEASYPYQGVD- 216

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    +      K+  ++ +    E +M  ++   GPL++  +A    +Y GGV D+ 
Sbjct: 217 --GTCSFKAANIGAKISNWTYVS-SNETQMAAYLVANGPLAIAADAVEWQFYLGGVFDVP 273

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              C     +H ++IVGY  E         YWIVKNSWG+ WGE+
Sbjct: 274 ---CG-NTLDHGILIVGYSAENTIFHKDKAYWIVKNSWGATWGEQ 314



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 23/160 (14%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSG---TAVFEVNKFFDLSD 99
           T+F  F   ++K Y+S E    R   F +N++  ++  R+ +    +  F VN+F DLS 
Sbjct: 26  TQFRQFQIKYNKQYTSSE-YAERFATFKSNLKVIDEKNRDAASRKSSVRFGVNEFADLSQ 84

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
           S+ +  T LN    + D   ++ A                      +DLP AFDWR +G 
Sbjct: 85  SEFRA-TYLNSVQAVRDPNAAVAADLPV------------------EDLPTAFDWRTKGA 125

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++ VK QG+C  CW+FS  G VE    + GN LT LS Q+
Sbjct: 126 VTGVKNQGQCGSCWSFSTTGNVEGQWFLAGNTLTGLSEQN 165


>gi|357156854|ref|XP_003577598.1| PREDICTED: thiol protease SEN102-like [Brachypodium distachyon]
          Length = 368

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 146/282 (51%), Gaps = 33/282 (11%)

Query: 208 EDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQP 267
            D  RR   F  NV+   +   +D       +NKF D++  +L+     +       +  
Sbjct: 63  HDPARRFNVFKENVKYIHEANKKDR-PFRLALNKFADMTTDELRHSYAGSRVRHHRALSG 121

Query: 268 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 327
             +A  +   +D E             +LP A DWR +G ++ +K+QG+C  CWAFS + 
Sbjct: 122 GRRAQGNFTYSDAE-------------NLPPAVDWREKGAVTGIKDQGQCGSCWAFSTIA 168

Query: 328 VVEAMHAIQGNSLTELSVQQLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKA 386
            VE+++ I+   L  LS Q+L+DCD +++ GC+GG MD A Q+I  NGGV S+  YPY+ 
Sbjct: 169 AVESINKIRTGKLVSLSEQELMDCDNVNDQGCDGGLMDYAFQFIQKNGGVTSEANYPYQG 228

Query: 387 SESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGG 444
            ++   C   +E    V +  Y  +P  +E  ++K VA + P+SV + A+G    +YS G
Sbjct: 229 QQNT--CDQAKENTHDVAIDGYEDVPANDESALQKAVAYQ-PVSVAIEASGQDFQFYSEG 285

Query: 445 VI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
           V       DL+  +    YGT+     YWIVKNSWG DWGEK
Sbjct: 286 VFTGQCTTDLDHGVAAVGYGTARDGTKYWIVKNSWGLDWGEK 327



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 14/166 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +   KL  L+ ++L+DCD +++ GC+GG MD A Q+I  NGGV S+  YPY+  ++ 
Sbjct: 173 INKIRTGKLVSLSEQELMDCDNVNDQGCDGGLMDYAFQFIQKNGGVTSEANYPYQGQQNT 232

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C   +E    V +  Y  +P  +E  ++K VA + P+SV + A+G    +YS GV   
Sbjct: 233 --CDQAKENTHDVAIDGYEDVPANDESALQKAVAYQ-PVSVAIEASGQDFQFYSEGVFTG 289

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C     +H +  VGYG    +DGT   YWIVKNSWG DWGEK
Sbjct: 290 Q---CTTDL-DHGVAAVGYG--TARDGTK--YWIVKNSWGLDWGEK 327



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 60  EDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQP 119
            D  RR   F  NV+   +  ++D       +NKF D++  +L+     +       +  
Sbjct: 63  HDPARRFNVFKENVKYIHEANKKDR-PFRLALNKFADMTTDELRHSYAGSRVRHHRALSG 121

Query: 120 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 179
             +A  +   +D E             +LP A DWR +G ++ +K+QG+C  CWAFS + 
Sbjct: 122 GRRAQGNFTYSDAE-------------NLPPAVDWREKGAVTGIKDQGQCGSCWAFSTIA 168

Query: 180 VVEAMHAIQGNNLTELSVQ 198
            VE+++ I+   L  LS Q
Sbjct: 169 AVESINKIRTGKLVSLSEQ 187


>gi|71663163|ref|XP_818578.1| cysteine peptidase [Trypanosoma cruzi strain CL Brener]
 gi|70883837|gb|EAN96727.1| cysteine peptidase, putative [Trypanosoma cruzi]
          Length = 467

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 143/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
                   Q   + P                        P A DWRA G ++ VK+QG+C
Sbjct: 101 GAVHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC+GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYWI+KNSW + WGE+   ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D  ++PYWI+KNSW + WGE+
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWIIKNSWTTQWGEE 313



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 65/157 (41%), Gaps = 18/157 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
            ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  +
Sbjct: 35  TSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREE 93

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +     N        Q   + P                        P A DWRA G ++
Sbjct: 94  FRSRYH-NGAVHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVT 136

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 137 AVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|356515048|ref|XP_003526213.1| PREDICTED: vignain-like [Glycine max]
          Length = 350

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 150/294 (51%), Gaps = 41/294 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ + KVY    +  +R   F  NVE  E + +          NK + LS + L      
Sbjct: 42  MKKYGKVYKDAAEKQKRLLIFKDNVEFIESFNAAG--------NKPYKLSINHL------ 87

Query: 257 NLDSTLEDIQPSLQA-PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
             D T E+   S     +  + + T    F++ ++    D+P A DWR  G ++ VK+QG
Sbjct: 88  -ADQTNEEFVASHNGYKYKGSHSQT---PFKYGNVT---DIPTAVDWRQNGAVTAVKDQG 140

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGG 375
           +C  CWAFS V   E ++ I    L  LS Q+LVDCD  + GC+GG M+D  ++II NGG
Sbjct: 141 QCGSCWAFSTVAATEGIYQISTGMLMSLSEQELVDCDSVDHGCDGGLMEDGFEFIIKNGG 200

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + S+  YPY A +    C   +E     ++K Y  +P   EE +++ VA + P+SV ++A
Sbjct: 201 ISSEANYPYTAVDGT--CDASKEASPAAQIKGYETVPANSEEALQQAVANQ-PVSVSIDA 257

Query: 436 --NGLFYYSGGVI------DLNQRL----YGT----SIPYWIVKNSWGSDWGEK 473
             +G  +YS GV        L+  +    YGT    +  YWIVKNSWG+ WGE+
Sbjct: 258 GGSGFQFYSSGVFTGQCGTQLDHGVTVVGYGTTDDGTHEYWIVKNSWGTQWGEE 311



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 93/157 (59%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  + GC+GG M+D  ++II NGG+ S+  YPY A +    C   +E 
Sbjct: 165 LMSLSEQELVDCDSVDHGCDGGLMEDGFEFIIKNGGISSEANYPYTAVDGT--CDASKEA 222

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCNPKA 615
               ++K Y  +P   EE +++ VA + P+SV ++A  +G  +YS GV       C  + 
Sbjct: 223 SPAAQIKGYETVPANSEEALQQAVANQ-PVSVSIDAGGSGFQFYSSGVFTGQ---CGTQL 278

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H + +VGYG  +  DGT   YWIVKNSWG+ WGE+
Sbjct: 279 -DHGVTVVGYGTTD--DGTH-EYWIVKNSWGTQWGEE 311



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 24/192 (12%)

Query: 8   SLGEKGLGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHE 67
           S+G+K   ++   ++ +++  S +     +  S   R   +M+ + KVY    +  +R  
Sbjct: 3   SMGKKQ--HILALVLLLSICTSQVMSRNLHEASMSERHEQWMKKYGKVYKDAAEKQKRLL 60

Query: 68  NFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA-PFS 126
            F  NVE  E +            NK + LS + L        D T E+   S     + 
Sbjct: 61  IFKDNVEFIESFNAAG--------NKPYKLSINHL-------ADQTNEEFVASHNGYKYK 105

Query: 127 SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHA 186
            + + T    F++ ++    D+P A DWR  G ++ VK+QG+C  CWAFS V   E ++ 
Sbjct: 106 GSHSQT---PFKYGNVT---DIPTAVDWRQNGAVTAVKDQGQCGSCWAFSTVAATEGIYQ 159

Query: 187 IQGNNLTELSVQ 198
           I    L  LS Q
Sbjct: 160 ISTGMLMSLSEQ 171


>gi|356515044|ref|XP_003526211.1| PREDICTED: LOW QUALITY PROTEIN: thiol protease SEN102-like [Glycine
           max]
          Length = 337

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 137/273 (50%), Gaps = 39/273 (14%)

Query: 217 FVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSN 276
           F  NVE  E + +  +     GVN F DL+  + +      L  T E         FS  
Sbjct: 61  FKENVEFIESFNAAANKPYKLGVNLFADLTLEEFKDFR-FGLKKTHE---------FS-- 108

Query: 277 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 336
                +  F++ ++    D+PEA DWR +G ++ +K+QG+C  CWAFS V   E +H I 
Sbjct: 109 -----ITPFKYENVT---DIPEALDWREKGAVTPIKDQGQCGSCWAFSTVAATEGIHQIT 160

Query: 337 GNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 394
             +L  L  Q+LV CD    + GC GG M+D  ++II NGG+ +   YPYK       C 
Sbjct: 161 TGNLVSLXEQELVSCDTKGVDQGCEGGYMEDGFEFIIKNGGITTKANYPYKGVNGT--CN 218

Query: 395 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV------I 446
                    ++K Y  +P   EE ++K VA + P+SV ++AN     +Y+GG+       
Sbjct: 219 TTIAASTVAQIKGYETVPSYSEEALQKAVANQ-PVSVSIDANNGHFMFYAGGIYTGECGT 277

Query: 447 DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           DL+  +    YGT+    YWIVKNSWG+ W EK
Sbjct: 278 DLDHGVTAVGYGTTNETDYWIVKNSWGTGWDEK 310



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 82/164 (50%), Gaps = 16/164 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           +    L  L  ++LV CD    + GC GG M+D  ++II NGG+ +   YPYK       
Sbjct: 159 ITTGNLVSLXEQELVSCDTKGVDQGCEGGYMEDGFEFIIKNGGITTKANYPYKGVNGT-- 216

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
           C          ++K Y  +P   EE ++K VA + P+SV ++AN     +Y+GG+     
Sbjct: 217 CNTTIAASTVAQIKGYETVPSYSEEALQKAVANQ-PVSVSIDANNGHFMFYAGGIYTGE- 274

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C     +H +  VGYG   + D     YWIVKNSWG+ W EK
Sbjct: 275 --CGTDL-DHGVTAVGYGTTNETD-----YWIVKNSWGTGWDEK 310



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 14/144 (9%)

Query: 62  LLRRHENFVTNVEKAEDYQREDSGTAVFEVN----KFFDLSDSDLQQLTGLNL--DSTLE 115
           L   HEN++    +      E     +F+ N    + F+ + +   +L G+NL  D TLE
Sbjct: 34  LREEHENWIARYGQVYKVAAEKETFQIFKENVEFIESFNAAANKPYKL-GVNLFADLTLE 92

Query: 116 DIQPSLQAPFSSNQT-DTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWA 174
           + +      F   +T +  +  F++ ++    D+PEA DWR +G ++ +K+QG+C  CWA
Sbjct: 93  EFK---DFRFGLKKTHEFSITPFKYENVT---DIPEALDWREKGAVTPIKDQGQCGSCWA 146

Query: 175 FSAVGVVEAMHAIQGNNLTELSVQ 198
           FS V   E +H I   NL  L  Q
Sbjct: 147 FSTVAATEGIHQITTGNLVSLXEQ 170


>gi|348546019|ref|XP_003460476.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
 gi|348546143|ref|XP_003460538.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/222 (40%), Positives = 123/222 (55%), Gaps = 21/222 (9%)

Query: 270 QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 329
           Q    S       R   F  L  G DLP+A DWR +G ++ VK+Q +C  CWAFSA G +
Sbjct: 92  QGCLHSFNASLPRRGSTFFRLPEGTDLPDAVDWRDKGYVTDVKDQKQCGSCWAFSATGSL 151

Query: 330 EAMHAIQGNSLTELSVQQLVDC--DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKAS 387
           E  H  +  +L  LS QQLVDC  D  N GC GG MD A QYI  NGG+ ++++YPY   
Sbjct: 152 EGQHFRKTGTLVSLSEQQLVDCSGDYGNMGCMGGLMDYAFQYIQANGGIDTEESYPY--- 208

Query: 388 ESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSG- 443
           E+E G      +        Y+ +  G+E+ +K+ VAT GP+SVG++A+ +   FY SG 
Sbjct: 209 EAENGKCRYNPDNIGATSTGYTEVSQGDEDALKEAVATIGPISVGIDASQMSFQFYESGV 268

Query: 444 ------GVIDLNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
                   ++L+  +    YGT     YW+VKNSWG +WG+K
Sbjct: 269 YNEPDCSSLELDHGVLAVGYGTEDGNDYWLVKNSWGLEWGDK 310



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 97/166 (58%), Gaps = 18/166 (10%)

Query: 491 TGVLPSKLSRLATEKLVDC--DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           TG L S    L+ ++LVDC  D  N GC GG MD A QYI  NGG+ ++++YPY   E+E
Sbjct: 159 TGTLVS----LSEQQLVDCSGDYGNMGCMGGLMDYAFQYIQANGGIDTEESYPY---EAE 211

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDL 606
            G      +        Y+ +  G+E+ +K+ VAT GP+SVG++A+ +   +Y  GV   
Sbjct: 212 NGKCRYNPDNIGATSTGYTEVSQGDEDALKEAVATIGPISVGIDASQMSFQFYESGV--Y 269

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           N+  C+    +H ++ VGYG E+  D     YW+VKNSWG +WG+K
Sbjct: 270 NEPDCSSLELDHGVLAVGYGTEDGND-----YWLVKNSWGLEWGDK 310



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 39/78 (50%)

Query: 122 QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 181
           Q    S       R   F  L  G DLP+A DWR +G ++ VK+Q +C  CWAFSA G +
Sbjct: 92  QGCLHSFNASLPRRGSTFFRLPEGTDLPDAVDWRDKGYVTDVKDQKQCGSCWAFSATGSL 151

Query: 182 EAMHAIQGNNLTELSVQH 199
           E  H  +   L  LS Q 
Sbjct: 152 EGQHFRKTGTLVSLSEQQ 169


>gi|242055753|ref|XP_002457022.1| hypothetical protein SORBIDRAFT_03g047290 [Sorghum bicolor]
 gi|241928997|gb|EES02142.1| hypothetical protein SORBIDRAFT_03g047290 [Sorghum bicolor]
          Length = 378

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/304 (34%), Positives = 154/304 (50%), Gaps = 35/304 (11%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL---- 253
           +H    Y+S+E+ LRR E F  N+   ++   + S +   G+N+F DL+  + +      
Sbjct: 54  RHRKGAYASLEEKLRRFEVFKDNLHHIDETNRKVS-SYWLGLNEFADLTHDEFKATYLGL 112

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD---LPEAFDWRAEGVISK 310
           +       +  +           +  +   +F+F     G D   LP++ DWR++G ++ 
Sbjct: 113 SPSGGGGDVVHMHHDDDDEEPEEEGSSSSSSFRFR--YEGVDAARLPKSVDWRSKGAVTG 170

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQY 369
           VK QG+C  CWAFS V  VE ++ I   +LT LS Q+LVDCD   N GCNGG MD A  Y
Sbjct: 171 VKNQGQCGSCWAFSTVAAVEGINQIVTGNLTALSEQELVDCDTDGNNGCNGGLMDYAFSY 230

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I  NGG+ +++AYPY   E    C  G      V +  Y  +P   E+ + K +A + P+
Sbjct: 231 IAHNGGLHTEEAYPYLMEEGT--CSRGSSAAV-VTISGYEDVPRNNEQALLKALAHQ-PV 286

Query: 430 SVGMNANG--LFYYSGGVID------LNQRL----YGTS--------IPYWIVKNSWGSD 469
           SV + A+G  L +YSGGV D      L+  +    YGT+          Y IVKNSWG  
Sbjct: 287 SVAIEASGRNLQFYSGGVFDGPCGTQLDHGVAAVGYGTAGKDNGHVVADYIIVKNSWGPS 346

Query: 470 WGEK 473
           WGEK
Sbjct: 347 WGEK 350



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 12/164 (7%)

Query: 493 VLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++LVDCD   N GCNGG MD A  YI  NGG+ +++AYPY   E    C
Sbjct: 195 IVTGNLTALSEQELVDCDTDGNNGCNGGLMDYAFSYIAHNGGLHTEEAYPYLMEEGT--C 252

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
             G      V +  Y  +P   E+ + K +A + P+SV + A+G  L +YSGGV D    
Sbjct: 253 SRGSSAAV-VTISGYEDVPRNNEQALLKALAHQ-PVSVAIEASGRNLQFYSGGVFD---G 307

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIP-YWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG   K +G  +  Y IVKNSWG  WGEK
Sbjct: 308 PCGTQL-DHGVAAVGYGTAGKDNGHVVADYIIVKNSWGPSWGEK 350



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)

Query: 45  FLNFMRDHDK-VYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           F  ++  H K  Y+S+E+ LRR E F  N+   ++  R+ S +    +N+F DL+  + +
Sbjct: 48  FERWLSRHRKGAYASLEEKLRRFEVFKDNLHHIDETNRKVS-SYWLGLNEFADLTHDEFK 106

Query: 104 QL----TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD---LPEAFDWRA 156
                 +       +  +           +  +   +F+F     G D   LP++ DWR+
Sbjct: 107 ATYLGLSPSGGGGDVVHMHHDDDDEEPEEEGSSSSSSFRFR--YEGVDAARLPKSVDWRS 164

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +G ++ VK QG+C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 165 KGAVTGVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTALSEQ 206


>gi|224114698|ref|XP_002316833.1| predicted protein [Populus trichocarpa]
 gi|222859898|gb|EEE97445.1| predicted protein [Populus trichocarpa]
          Length = 305

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 42/297 (14%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           E  +  + + Y    +  RR   F  NVE  E +           VN+F DL        
Sbjct: 5   ETWMAQYGRAYKGHVEKERRLNIFKNNVEFIESFNKVGKKPYKLSVNEFADL-------- 56

Query: 254 TGLNLDSTLEDIQPSLQA-PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
                  T E+ Q S      S++ + +  + F++ ++     +P   DWR +G ++ +K
Sbjct: 57  -------TNEEFQASRNGYKMSAHLSSSSTKPFRYENVSA---VPSTMDWRKKGAVTPIK 106

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYI 370
           +QG+C CCWAFSAV   E +  +    L  LS Q+LVDCD S  + GCNGG MDDA  +I
Sbjct: 107 DQGQCGCCWAFSAVAATEGITQLSTGKLISLSEQELVDCDTSGEDQGCNGGLMDDAFDFI 166

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           I N G+ ++  YPY+ ++    C  G+      K+  Y  +P   E  + K VA + P+S
Sbjct: 167 IQNKGLTTEANYPYQGADG--ACNSGKA---AAKITGYEDVPANSEAALLKAVANQ-PVS 220

Query: 431 VGMNANG--LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           V ++A G    +YS GV       DL+  +    YG S     YW+VKNSWG+ WGE
Sbjct: 221 VAIDAGGSAFQFYSSGVFTGDCGTDLDHGVTAVGYGMSDDGTKYWLVKNSWGTSWGE 277



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 92/168 (54%), Gaps = 22/168 (13%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD S  + GCNGG MDDA  +II N G+ ++  YPY+ ++ 
Sbjct: 126 ITQLSTGKLISLSEQELVDCDTSGEDQGCNGGLMDDAFDFIIQNKGLTTEANYPYQGADG 185

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI- 604
              C  G+      K+  Y  +P   E  + K VA + P+SV ++A G    +YS GV  
Sbjct: 186 --ACNSGKA---AAKITGYEDVPANSEAALLKAVANQ-PVSVAIDAGGSAFQFYSSGVFT 239

Query: 605 -DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            D    L      +H +  VGYG  +  DGT   YW+VKNSWG+ WGE
Sbjct: 240 GDCGTDL------DHGVTAVGYGMSD--DGTK--YWLVKNSWGTSWGE 277



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 19/167 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + + Y    +  RR   F  NVE  E + +         VN+F DL++    
Sbjct: 3   RHETWMAQYGRAYKGHVEKERRLNIFKNNVEFIESFNKVGKKPYKLSVNEFADLTN---- 58

Query: 104 QLTGLNLDSTLEDIQPSLQA-PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
                      E+ Q S      S++ + +  + F++ ++     +P   DWR +G ++ 
Sbjct: 59  -----------EEFQASRNGYKMSAHLSSSSTKPFRYENVSA---VPSTMDWRKKGAVTP 104

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED 209
           +K+QG+C CCWAFSAV   E +  +    L  LS Q      +S ED
Sbjct: 105 IKDQGQCGCCWAFSAVAATEGITQLSTGKLISLSEQELVDCDTSGED 151


>gi|93279887|pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra-
           14009
          Length = 217

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 116/196 (59%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 60

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +      ++Y+ +P
Sbjct: 61  YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCRKYTELP 117

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 118 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 177

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GEK
Sbjct: 178 EYWLVKNSWGHNFGEK 193



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 95/161 (59%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 44  KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 101

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +      ++Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 102 -DSKYRAATCRKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 158

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GEK
Sbjct: 159 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEK 193



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 52


>gi|1514953|dbj|BAA11170.1| cysteine proteinase [Oryza sativa (japonica cultivar-group)]
          Length = 368

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 145/292 (49%), Gaps = 36/292 (12%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGL 256
           Q H  V     +  RR   F  NV    ++     G A   +N+F D+   + +    G 
Sbjct: 50  QEHHHVPRHHGEKHRRFGAFKDNVRYIHEHNKRAPGYAP--LNRFGDMGREEFRATFAGS 107

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           + +    D    L AP         +  F +  +R   DLP A DWR +G ++ VK+QGK
Sbjct: 108 HANDLRRD---GLAAP--------PLPGFMYEGVR---DLPRAVDWRRKGAVTGVKDQGK 153

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS V  VE ++AI+   L  LS Q+L+DCD + N GC GG M++A +YI  +GG
Sbjct: 154 CGSCWAFSTVVSVEGINAIRTGRLVSLSEQELIDCDTADNSGCQGGLMENAFEYIKHSGG 213

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++ AYPY+A+     C      G  V +  +  +P   E  + K VA + P+SV ++A
Sbjct: 214 ITTESAYPYRAANGT--CDAVRARGGLVVIDGHQNVPANSEAALAKAVANQ-PVSVAIDA 270

Query: 436 --NGLFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
                 +YS GV       DL+  +    YG +     YWIVKNSWG+ WGE
Sbjct: 271 GDQSFQFYSDGVFAGDCGTDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGE 322



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 18/167 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +   +L  L+ ++L+DCD + N GC GG M++A +YI  +GG+ ++ AYPY+A+   
Sbjct: 169 INAIRTGRLVSLSEQELIDCDTADNSGCQGGLMENAFEYIKHSGGITTESAYPYRAANGT 228

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI-- 604
             C      G  V +  +  +P   E  + K VA + P+SV ++A      +YS GV   
Sbjct: 229 --CDAVRARGGLVVIDGHQNVPANSEAALAKAVANQ-PVSVAIDAGDQSFQFYSDGVFAG 285

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           D    L      +H + +VGYG  E  DGT   YWIVKNSWG+ WGE
Sbjct: 286 DCGTDL------DHGVAVVGYG--ETNDGTE--YWIVKNSWGTAWGE 322



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 17/150 (11%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGL 108
           ++H  V     +  RR   F  NV    ++ +   G A   +N+F D+   + +    G 
Sbjct: 50  QEHHHVPRHHGEKHRRFGAFKDNVRYIHEHNKRAPGYA--PLNRFGDMGREEFRATFAGS 107

Query: 109 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 168
           + +    D    L AP         +  F +  +R   DLP A DWR +G ++ VK+QGK
Sbjct: 108 HANDLRRD---GLAAP--------PLPGFMYEGVR---DLPRAVDWRRKGAVTGVKDQGK 153

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           C  CWAFS V  VE ++AI+   L  LS Q
Sbjct: 154 CGSCWAFSTVVSVEGINAIRTGRLVSLSEQ 183


>gi|30141021|dbj|BAC75924.1| cysteine protease-2 [Helianthus annuus]
          Length = 362

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 32/300 (10%)

Query: 190 NNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD 249
           +NL ++  +   KV ++  + LRR   F +NV    +    D    +  +NKF D++  +
Sbjct: 34  DNLWDMYERWRHKVATNHGEKLRRFNVFKSNVLHVHETNKMDKPYKL-KLNKFADMTNHE 92

Query: 250 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
            + +      S +     SLQ   S ++T      F + ++   + +P + DWR +G ++
Sbjct: 93  FRSVYA---GSKIHHHDRSLQGDRSGSKT------FMYANV---ESVPTSVDWRKKGAVA 140

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD-MSNGGCNGGRMDDALQ 368
            VK+QG+C  CWAFS V  VE ++ I+ N L  LS Q+LVDCD + N GCNGG MD A  
Sbjct: 141 PVKDQGQCGSCWAFSTVAAVEGINKIKTNELVSLSEQELVDCDTLENQGCNGGLMDLAFD 200

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
           +I   GG+  + AYPY A + +  C   +     V +  +  +P  +E+ + K VA + P
Sbjct: 201 FIKKTGGLTREDAYPYAAEDGK--CDSNKMNSPVVSIDGHEDVPKNDEQSLMKAVANQ-P 257

Query: 429 LSVGMNANG--LFYYSGGVI------DLNQRL----YGTSI---PYWIVKNSWGSDWGEK 473
           ++V ++A      +YS GV        L+  +    YGT++    YWIV+NSWGS+WGEK
Sbjct: 258 VAVAIDAGSSDFQFYSEGVFTGKCGTQLDHGVAAVGYGTTLDGTKYWIVRNSWGSEWGEK 317



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 14/166 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +  ++L  L+ ++LVDCD + N GCNGG MD A  +I   GG+  + AYPY A + +
Sbjct: 163 INKIKTNELVSLSEQELVDCDTLENQGCNGGLMDLAFDFIKKTGGLTREDAYPYAAEDGK 222

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C   +     V +  +  +P  +E+ + K VA + P++V ++A      +YS GV   
Sbjct: 223 --CDSNKMNSPVVSIDGHEDVPKNDEQSLMKAVANQ-PVAVAIDAGSSDFQFYSEGVF-- 277

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  +  +H +  VGYG     DGT   YWIV+NSWGS+WGEK
Sbjct: 278 -TGKCGTQL-DHGVAAVGYG--TTLDGTK--YWIVRNSWGSEWGEK 317



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 13/151 (8%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           + R   KV ++  + LRR   F +NV    +  + D    + ++NKF D+++ + + +  
Sbjct: 40  YERWRHKVATNHGEKLRRFNVFKSNVLHVHETNKMDKPYKL-KLNKFADMTNHEFRSVYA 98

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
               S +     SLQ   S ++T      F + ++   + +P + DWR +G ++ VK+QG
Sbjct: 99  ---GSKIHHHDRSLQGDRSGSKT------FMYANV---ESVPTSVDWRKKGAVAPVKDQG 146

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +C  CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 147 QCGSCWAFSTVAAVEGINKIKTNELVSLSEQ 177


>gi|74229746|ref|YP_308950.1| cathepsin [Trichoplusia ni SNPV]
 gi|72259660|gb|AAZ67431.1| cathepsin [Trichoplusia ni SNPV]
          Length = 344

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 38/300 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQLTGLNL 258
           + KVY+   +   R++ F TN+E   + +++ + +AV+ +NKF DL++++ + + TGL +
Sbjct: 54  YKKVYADDNERDYRYKIFKTNLEII-NLKNQQNDSAVYNINKFADLTKNEVIAKFTGLGV 112

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
            S      P+L+        D   +  Q           E FDWR    I+ VK+QG C 
Sbjct: 113 KS------PNLKNFCDPLIVDGPSKYTQ-----------ETFDWRQFNKITSVKDQGFCG 155

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
            CWAFS +  +E+ +AI+ N   +LS QQLVDCD  + GC GG +  A + I+  GGV  
Sbjct: 156 SCWAFSTIAGLESQYAIKYNEHIDLSEQQLVDCDTIDMGCAGGLLHTAYEEIMSMGGVEY 215

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           ++ YPY++ +    C + E + F+V V    R     E+++K  +   GP++V ++A  L
Sbjct: 216 EEDYPYRSVQGP--CRI-ENDKFQVSVDNCYRYILYSEDKLKDVLHEMGPIAVAVDAVDL 272

Query: 439 FYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGE----KVEDKVGSSG 482
             Y GG+I       LN  +    YGT   IP+W++KNSWG+D+GE    +V+  V S G
Sbjct: 273 TDYYGGIITSCKNYGLNHAVLLVGYGTENGIPFWVLKNSWGTDYGENGFVRVKRNVNSCG 332



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 12/151 (7%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ ++LVDCD  + GC GG +  A + I+  GGV  ++ YPY++ +    C + E + F+
Sbjct: 180 LSEQQLVDCDTIDMGCAGGLLHTAYEEIMSMGGVEYEEDYPYRSVQGP--CRI-ENDKFQ 236

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           V V    R     E+++K  +   GP++V ++A  L  Y GG+I      C     NHA+
Sbjct: 237 VSVDNCYRYILYSEDKLKDVLHEMGPIAVAVDAVDLTDYYGGII----TSCKNYGLNHAV 292

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           ++VGYG E       IP+W++KNSWG+D+GE
Sbjct: 293 LLVGYGTE-----NGIPFWVLKNSWGTDYGE 318



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 19/169 (11%)

Query: 32  FQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEV 91
           F+ +  L      F  F   + KVY+   +   R++ F TN+E   + + + + +AV+ +
Sbjct: 34  FKLQYNLERAPQYFETFQTKYKKVYADDNERDYRYKIFKTNLEII-NLKNQQNDSAVYNI 92

Query: 92  NKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPE 150
           NKF DL+ ++ + + TGL + S      P+L+        D   +  Q           E
Sbjct: 93  NKFADLTKNEVIAKFTGLGVKS------PNLKNFCDPLIVDGPSKYTQ-----------E 135

Query: 151 AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            FDWR    I+ VK+QG C  CWAFS +  +E+ +AI+ N   +LS Q 
Sbjct: 136 TFDWRQFNKITSVKDQGFCGSCWAFSTIAGLESQYAIKYNEHIDLSEQQ 184


>gi|397133545|gb|AFO10079.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus S2]
          Length = 323

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 163/338 (48%), Gaps = 47/338 (13%)

Query: 177 AVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           AV    A   ++  N  E  V   +K Y S  + LRR + F  N+ +  +    DS  A 
Sbjct: 12  AVVKSAAYDLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKDQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRH 292
           + +NKF DLS+ + + + TGL+L    ++    +   Q P                    
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKG----------------- 112

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
               P  FDWR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS QQ++DCD
Sbjct: 113 ----PLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCD 168

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A + II  GGV  +  YPY+A  +   C +   + F V+VK+  R  
Sbjct: 169 FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNSNK-FLVQVKDCYRYI 225

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYW 460
              EE++K  +   GP+ + ++A  +  Y  G+I       LN  +    YG   +IPYW
Sbjct: 226 TVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIKYCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +V+  + + G R  +L  T V+
Sbjct: 286 TFKNTWGTDWGEDGFFRVQQNINACGMRN-ELASTAVI 322



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 12/156 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A + II  GGV  +  YPY+A  +   C +  
Sbjct: 154 NQLINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNS 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  G+I    + C    
Sbjct: 212 NK-FLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII----KYCFNSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            NHA+++VGYG E      +IPYW  KN+WG+DWGE
Sbjct: 267 LNHAVLLVGYGVE-----NNIPYWTFKNTWGTDWGE 297



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 28/166 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P   F  F+   +K Y S  + LRR + F  N+ +  +  + DS  A +E+NKF DL
Sbjct: 22  LKAP-NYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKDQNDS--AKYEINKFSDL 78

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 153
           S D  + + TGL+L    ++    +   Q P                        P  FD
Sbjct: 79  SKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKG---------------------PLEFD 117

Query: 154 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           WR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS Q 
Sbjct: 118 WRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQ 163


>gi|12597541|ref|NP_075125.1| cathepsin [Helicoverpa armigera nucleopolyhedrovirus G4]
 gi|15426394|ref|NP_203611.1| cathepsin [Helicoverpa armigera NPV]
 gi|12483807|gb|AAG53799.1|AF271059_56 cathepsin [Helicoverpa armigera nucleopolyhedrovirus G4]
 gi|15384470|gb|AAK96381.1|AF303045_123 cathepsin [Helicoverpa armigera NPV]
 gi|18027090|gb|AAL55725.1|AF268612_1 cathepsin [Helicoverpa armigera NPV]
          Length = 365

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 160/315 (50%), Gaps = 49/315 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSED-----------SGTAVFGVNKFFDL 245
           +Q ++K Y   ++   R+  F  N+ K      E+           S +A FGVNKF D 
Sbjct: 59  LQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDK 118

Query: 246 SESD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ-FNSLRHGDDLPEAFDWR 303
           +  + L   TG  L+              S + T  E R  +   ++R    LP+ +DWR
Sbjct: 119 TPDEVLHSNTGFFLN-------------LSQHYTLCENRIVKGAPNIR----LPDYYDWR 161

Query: 304 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRM 363
               ++ +K+QG C  CWAF A+G +E+ +AI+ N L +LS QQL+DCD  + GCNGG M
Sbjct: 162 DTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEVDLGCNGGLM 221

Query: 364 DDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWV 423
             A Q ++  GGV ++  YPY+   SE+ C + +     VK+    +    +E ++K+ V
Sbjct: 222 HLAFQELLLMGGVETEADYPYQG--SEQMCTL-DNRKIAVKLNSCFKYDIRDENKLKELV 278

Query: 424 ATRGPLSVGMNANGLFYYSGGVI------DLNQR--LYG----TSIPYWIVKNSWGSDWG 471
            T GP+++ ++A  +  Y  G++      DLN    L G     ++PYWI+KNSWG DWG
Sbjct: 279 YTTGPVAIAVDAMDIINYRRGILNQCHIYDLNHAVLLIGWGIENNVPYWIIKNSWGEDWG 338

Query: 472 E----KVEDKVGSSG 482
           E    +V   V + G
Sbjct: 339 ENGYLRVRRNVNACG 353



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 95/160 (59%), Gaps = 12/160 (7%)

Query: 492 GVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
            +  +KL  L+ ++L+DCD  + GCNGG M  A Q ++  GGV ++  YPY+   SE+ C
Sbjct: 192 AIRHNKLIDLSEQQLLDCDEVDLGCNGGLMHLAFQELLLMGGVETEADYPYQG--SEQMC 249

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLC 611
            + +     VK+    +    +E ++K+ V T GP+++ ++A  +  Y  G+  LNQ  C
Sbjct: 250 TL-DNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGI--LNQ--C 304

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +    NHA++++G+G E      ++PYWI+KNSWG DWGE
Sbjct: 305 HIYDLNHAVLLIGWGIE-----NNVPYWIIKNSWGEDWGE 339



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 30/167 (17%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRED-----------SGTAVFEVNK 93
           F +F++ ++K Y   ++   R+  F  N+ K     RE+           S +A F VNK
Sbjct: 55  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 114

Query: 94  FFDLS-DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ-FNSLRHGDDLPEA 151
           F D + D  L   TG  L+              S + T  E R  +   ++R    LP+ 
Sbjct: 115 FSDKTPDEVLHSNTGFFLN-------------LSQHYTLCENRIVKGAPNIR----LPDY 157

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +DWR    ++ +K+QG C  CWAF A+G +E+ +AI+ N L +LS Q
Sbjct: 158 YDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQ 204


>gi|118486542|gb|ABK95110.1| unknown [Populus trichocarpa]
          Length = 465

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 147/288 (51%), Gaps = 35/288 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+++ +  +R E F  N+   + + SE+  T   G+N+F DL+  + + +  L   
Sbjct: 58  HGKNYNALGEKEKRFEIFKDNLMFIDQHNSENR-TYTVGLNRFADLTNEEFRSMY-LGTR 115

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +  +   P     ++                R GD LP++ DWR EG +++VK+QG C  
Sbjct: 116 TGHKKRLPKTSDRYAP---------------RVGDSLPDSVDWRKEGAVAEVKDQGGCGS 160

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+NGG+ +
Sbjct: 161 CWAFSTIAAVEGINKIVTGDLIALSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDT 220

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           +  YPY   +    C    +    V +  Y  +P  +E  +KK VA + P+SV +   G 
Sbjct: 221 EDDYPYLGRDGR--CDTYRKNAKVVSIDSYEDVPENDETALKKAVANQ-PVSVAIEGGGR 277

Query: 439 FY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            +  Y+ GV        L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 278 NFQLYNSGVFTGECGTSLDHGVAAVGYGTEKGKDYWIVRNSWGKSWGE 325



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ ++  YPY   +  
Sbjct: 173 INKIVTGDLIALSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDTEDDYPYLGRDGR 232

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P  +E  +KK VA + P+SV +   G  +  Y+ GV   
Sbjct: 233 --CDTYRKNAKVVSIDSYEDVPENDETALKKAVANQ-PVSVAIEGGGRNFQLYNSGVFTG 289

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   + +H +  VGYG E+ KD     YWIV+NSWG  WGE
Sbjct: 290 E---CG-TSLDHGVAAVGYGTEKGKD-----YWIVRNSWGKSWGE 325



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 17/151 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K Y+++ +  +R E F  N+   + +  E+  T    +N+F DL++ + + +  
Sbjct: 54  WLVKHGKNYNALGEKEKRFEIFKDNLMFIDQHNSENR-TYTVGLNRFADLTNEEFRSMY- 111

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           L   +  +   P     ++                R GD LP++ DWR EG +++VK+QG
Sbjct: 112 LGTRTGHKKRLPKTSDRYAP---------------RVGDSLPDSVDWRKEGAVAEVKDQG 156

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS +  VE ++ I   +L  LS Q
Sbjct: 157 GCGSCWAFSTIAAVEGINKIVTGDLIALSEQ 187


>gi|344310882|gb|AEN03980.1| cathepsin-like cysteine proteinase [Helicoverpa armigera NPV strain
           Australia]
          Length = 367

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 160/315 (50%), Gaps = 49/315 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSED-----------SGTAVFGVNKFFDL 245
           +Q ++K Y   ++   R+  F  N+ K      E+           S +A FGVNKF D 
Sbjct: 61  LQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDK 120

Query: 246 SESD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ-FNSLRHGDDLPEAFDWR 303
           +  + L   TG  L+              S + T  E R  +   ++R    LP+ +DWR
Sbjct: 121 TPDEVLHSNTGFFLN-------------LSQHYTLCENRIVKGAPNIR----LPDYYDWR 163

Query: 304 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRM 363
               ++ +K+QG C  CWAF A+G +E+ +AI+ N L +LS QQL+DCD  + GCNGG M
Sbjct: 164 DTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEVDLGCNGGLM 223

Query: 364 DDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWV 423
             A Q ++  GGV ++  YPY+   SE+ C + +     VK+    +    +E ++K+ V
Sbjct: 224 HLAFQELLLMGGVETEADYPYQG--SEQMCTL-DNRKIAVKLNSCFKYDIRDENKLKELV 280

Query: 424 ATRGPLSVGMNANGLFYYSGGVI------DLNQR--LYG----TSIPYWIVKNSWGSDWG 471
            T GP+++ ++A  +  Y  G++      DLN    L G     ++PYWI+KNSWG DWG
Sbjct: 281 YTTGPVAIAVDAMDIINYRRGILNQCHIYDLNHAVLLIGWGIENNVPYWIIKNSWGEDWG 340

Query: 472 E----KVEDKVGSSG 482
           E    +V   V + G
Sbjct: 341 ENGYLRVRRNVNACG 355



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 95/160 (59%), Gaps = 12/160 (7%)

Query: 492 GVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
            +  +KL  L+ ++L+DCD  + GCNGG M  A Q ++  GGV ++  YPY+   SE+ C
Sbjct: 194 AIRHNKLIDLSEQQLLDCDEVDLGCNGGLMHLAFQELLLMGGVETEADYPYQG--SEQMC 251

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLC 611
            + +     VK+    +    +E ++K+ V T GP+++ ++A  +  Y  G+  LNQ  C
Sbjct: 252 TL-DNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGI--LNQ--C 306

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +    NHA++++G+G E      ++PYWI+KNSWG DWGE
Sbjct: 307 HIYDLNHAVLLIGWGIE-----NNVPYWIIKNSWGEDWGE 341



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 30/167 (17%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRED-----------SGTAVFEVNK 93
           F +F++ ++K Y   ++   R+  F  N+ K     RE+           S +A F VNK
Sbjct: 57  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 116

Query: 94  FFDLS-DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ-FNSLRHGDDLPEA 151
           F D + D  L   TG  L+              S + T  E R  +   ++R    LP+ 
Sbjct: 117 FSDKTPDEVLHSNTGFFLN-------------LSQHYTLCENRIVKGAPNIR----LPDY 159

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +DWR    ++ +K+QG C  CWAF A+G +E+ +AI+ N L +LS Q
Sbjct: 160 YDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQ 206


>gi|357458909|ref|XP_003599735.1| Cysteine proteinase [Medicago truncatula]
 gi|357474677|ref|XP_003607623.1| Cysteine proteinase [Medicago truncatula]
 gi|355488783|gb|AES69986.1| Cysteine proteinase [Medicago truncatula]
 gi|355508678|gb|AES89820.1| Cysteine proteinase [Medicago truncatula]
          Length = 342

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 146/288 (50%), Gaps = 34/288 (11%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           K Y    +  +R + F  NVE  E + +  +      +N F DL+  + +    LN +  
Sbjct: 46  KSYKDAAEKEKRFQIFKNNVEFIELFNAVGNKPFNLSINHFADLTNEEFK--ASLNGNKK 103

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
           L D    L           E  +F+++++     +P + DWR  G ++ +K QG C  CW
Sbjct: 104 LHDKFDILN----------ETTSFRYHNVT---SVPASMDWRKRGAVTPIKNQGSCGSCW 150

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSN-GGCNGGRMDDALQYIIDNGGVVSDQ 380
           AFS V  +E +H I    L  LS Q+L+DC   N  GC+GG ++DA ++I   GG+ S+ 
Sbjct: 151 AFSTVASIEGIHQITTGELVSLSEQELIDCVRGNSSGCSGGYLEDAFKFIAKKGGMASET 210

Query: 381 AYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF- 439
            YPYK  E++  C   +E     ++K Y ++P   E ++ K VA + P+SV ++A     
Sbjct: 211 NYPYK--ETDEKCKFKKESKHVAEIKGYEKVPSNSENDLLKAVANQ-PVSVYVDAGDYVF 267

Query: 440 -YYSGGVI------DLNQRL----YGTSI---PYWIVKNSWGSDWGEK 473
            +YSGG+       D +  +    YG S+    YW+VKNSWG+ WGEK
Sbjct: 268 QFYSGGIFTGKCGTDTDHVVTIVGYGVSLDYTEYWLVKNSWGTGWGEK 315



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   +L  L+ ++L+DC   N  GC+GG ++DA ++I   GG+ S+  YPYK  E++  C
Sbjct: 164 ITTGELVSLSEQELIDCVRGNSSGCSGGYLEDAFKFIAKKGGMASETNYPYK--ETDEKC 221

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQR 609
              +E     ++K Y ++P   E ++ K VA + P+SV ++A      +YSGG+      
Sbjct: 222 KFKKESKHVAEIKGYEKVPSNSENDLLKAVANQ-PVSVYVDAGDYVFQFYSGGIF---TG 277

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     +H + IVGYG     D T   YW+VKNSWG+ WGEK
Sbjct: 278 KCGTDT-DHVVTIVGYGVS--LDYTE--YWLVKNSWGTGWGEK 315



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 15/151 (9%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           +M    K Y    +  +R + F  NVE  E +    +      +N F DL++ + +    
Sbjct: 40  WMTQFGKSYKDAAEKEKRFQIFKNNVEFIELFNAVGNKPFNLSINHFADLTNEEFK--AS 97

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           LN +  L D    L           E  +F+++++     +P + DWR  G ++ +K QG
Sbjct: 98  LNGNKKLHDKFDILN----------ETTSFRYHNVT---SVPASMDWRKRGAVTPIKNQG 144

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS V  +E +H I    L  LS Q
Sbjct: 145 SCGSCWAFSTVASIEGIHQITTGELVSLSEQ 175


>gi|19747207|gb|AAL96762.1|AC104496_8 Tcc1l8.8 [Trypanosoma cruzi]
          Length = 500

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 139/290 (47%), Gaps = 33/290 (11%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 76  QKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPH-ATFGVTPFSDLTREEFRSRYH-N 133

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
                   Q   + P                        P A DWRA G ++ VK+QG+C
Sbjct: 134 GAVHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 177

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC+GG M++A ++I+  +NG 
Sbjct: 178 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGA 237

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 238 VYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 296

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           +    Y+GGV        +D    L G     ++PYWI+KNSW + WGE+
Sbjct: 297 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEE 346



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 200 LTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 259

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 260 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 314

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D  ++PYWI+KNSW + WGE+
Sbjct: 315 LDHGVLLVGY-----NDSAAVPYWIIKNSWTTQWGEE 346



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 65/157 (41%), Gaps = 18/157 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
            ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  +
Sbjct: 68  TSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPH-ATFGVTPFSDLTREE 126

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +     N        Q   + P                        P A DWRA G ++
Sbjct: 127 FRSRYH-NGAVHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVT 169

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 170 AVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 206


>gi|375073976|gb|AFA34855.1| cathepsin L-like protein [Trypanosoma cruzi]
          Length = 467

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYGSAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P +                      P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEGSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYW++KNSW + WGE    ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWVIKNSWTTQWGEDGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTEGSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYW++KNSW + WGE
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWVIKNSWTTQWGE 312



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  + 
Sbjct: 36  SQFAEFKQKHGRVYGSAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEF 94

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +     N  +     Q   + P +                      P A DWRA G ++ 
Sbjct: 95  RSRYH-NGAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTA 137

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 138 VKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|161598418|gb|ABX74953.1| cysteine protease [Leishmania panamensis]
          Length = 441

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 152/299 (50%), Gaps = 47/299 (15%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL--QQLTG 255
           Q + +VY+++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++   + L+G
Sbjct: 43  QTYKRVYATLAEEQQRVANFQRNLELMREHQANNP-HARFGITKFFDLSEAEFATRYLSG 101

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH---GDDL---PEAFDWRAEGVIS 309
               +                      +A +F S  +   G DL   P A DWR  G ++
Sbjct: 102 ATHFA----------------------KAKKFASQHYRKVGADLSTAPAAVDWRQMGAVT 139

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQY 369
            V +QG C  CWAFSA+G +E+   +  +SL  LS Q+LV CD  + GCNGG M  A  +
Sbjct: 140 PVNDQGACGSCWAFSAIGNIESQWYVTTHSLITLSEQELVSCDDVDEGCNGGLMLQAFDW 199

Query: 370 IID--NGGVVSDQAYPYKASE-SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATR 426
           +++  NG V +  +YPY +   S   C    E      +  +  I    E+ M  W+A  
Sbjct: 200 LLNNKNGAVYTGASYPYVSGNGSVPECSESSELVVGAYIDGHVTIE-SNEDTMAAWLAVN 258

Query: 427 GPLSVGMNANGLFYYSGGVI---DLNQRLYGT---------SIPYWIVKNSWGSDWGEK 473
           GP+++ ++A+    Y+GG++   D  Q  +G           +PYW++KNSWG +WGEK
Sbjct: 259 GPIAIAVDASAFMSYTGGILTSCDGRQLNHGVLLVGYNMTGEVPYWLIKNSWGENWGEK 317



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 13/163 (7%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASE-SER 549
           V    L  L+ ++LV CD  + GCNGG M  A  ++++N  G V +  +YPY +   S  
Sbjct: 165 VTTHSLITLSEQELVSCDDVDEGCNGGLMLQAFDWLLNNKNGAVYTGASYPYVSGNGSVP 224

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C    E      +  +  I    E+ M  W+A  GP+++ ++A+    Y+GG++     
Sbjct: 225 ECSESSELVVGAYIDGHVTIE-SNEDTMAAWLAVNGPIAIAVDASAFMSYTGGILTS--- 280

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C+ +  NH +++VGY    +     +PYW++KNSWG +WGEK
Sbjct: 281 -CDGRQLNHGVLLVGYNMTGE-----VPYWLIKNSWGENWGEK 317



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 32/171 (18%)

Query: 37  YLNSPVT-RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           Y+  PV+  F  F + + +VY+++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  YVGRPVSVLFEEFKQTYKRVYATLAEEQQRVANFQRNLELMREHQANNP-HARFGITKFF 87

Query: 96  DLSDSDL--QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH---GDDL-- 148
           DLS+++   + L+G    +                      +A +F S  +   G DL  
Sbjct: 88  DLSEAEFATRYLSGATHFA----------------------KAKKFASQHYRKVGADLST 125

Query: 149 -PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            P A DWR  G ++ V +QG C  CWAFSA+G +E+   +  ++L  LS Q
Sbjct: 126 APAAVDWRQMGAVTPVNDQGACGSCWAFSAIGNIESQWYVTTHSLITLSEQ 176


>gi|241062152|gb|ACS66748.1| cysteine protease [Leishmania guyanensis]
          Length = 441

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 152/299 (50%), Gaps = 47/299 (15%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL--QQLTG 255
           Q + +VY+++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++   + L+G
Sbjct: 43  QTYKRVYATLAEEQQRVANFQRNLELMREHQANNP-HARFGITKFFDLSEAEFATRYLSG 101

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH---GDDL---PEAFDWRAEGVIS 309
               +                      +A +F S  +   G DL   P A DWR  G ++
Sbjct: 102 ATHFA----------------------KAKKFASQHYRKVGADLSTAPAAVDWRQMGAVT 139

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQY 369
            VK+QG C  CWA SA+G +E+   +  +SL  LS Q+LV CD  + GCNGG M  A  +
Sbjct: 140 PVKDQGACGSCWALSAIGNIESQWYVTTHSLITLSEQELVSCDDVDEGCNGGLMLQAFDW 199

Query: 370 IID--NGGVVSDQAYPYKASE-SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATR 426
           +++  NG V +  +YPY +   S   C    E      +  +  I    E+ M  W+A  
Sbjct: 200 LLNNKNGAVYTGASYPYVSGNGSVPECSESSELVVGAYIDGHVTIE-SNEDTMAAWLAVN 258

Query: 427 GPLSVGMNANGLFYYSGGVI---DLNQRLYGT---------SIPYWIVKNSWGSDWGEK 473
           GP+++ ++A+    Y+GG++   D  Q  +G           +PYW++KNSWG +WGEK
Sbjct: 259 GPIAIAVDASAFMSYTGGILTSCDGRQLNHGVLLVGYNMTGEVPYWLIKNSWGENWGEK 317



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 13/163 (7%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASE-SER 549
           V    L  L+ ++LV CD  + GCNGG M  A  ++++N  G V +  +YPY +   S  
Sbjct: 165 VTTHSLITLSEQELVSCDDVDEGCNGGLMLQAFDWLLNNKNGAVYTGASYPYVSGNGSVP 224

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C    E      +  +  I    E+ M  W+A  GP+++ ++A+    Y+GG++     
Sbjct: 225 ECSESSELVVGAYIDGHVTIE-SNEDTMAAWLAVNGPIAIAVDASAFMSYTGGILTS--- 280

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C+ +  NH +++VGY    +     +PYW++KNSWG +WGEK
Sbjct: 281 -CDGRQLNHGVLLVGYNMTGE-----VPYWLIKNSWGENWGEK 317



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 32/171 (18%)

Query: 37  YLNSPVT-RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           ++  PV+  F  F + + +VY+++ +  +R  NF  N+E   ++Q  +   A F + KFF
Sbjct: 29  HVGRPVSVLFEEFKQTYKRVYATLAEEQQRVANFQRNLELMREHQANNP-HARFGITKFF 87

Query: 96  DLSDSDL--QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH---GDDL-- 148
           DLS+++   + L+G    +                      +A +F S  +   G DL  
Sbjct: 88  DLSEAEFATRYLSGATHFA----------------------KAKKFASQHYRKVGADLST 125

Query: 149 -PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            P A DWR  G ++ VK+QG C  CWA SA+G +E+   +  ++L  LS Q
Sbjct: 126 APAAVDWRQMGAVTPVKDQGACGSCWALSAIGNIESQWYVTTHSLITLSEQ 176


>gi|355763133|gb|EHH62119.1| hypothetical protein EGM_20318 [Macaca fascicularis]
          Length = 331

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 117/196 (59%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA++ +  C   + +       +Y+ +P
Sbjct: 175 YGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKATDQK--CQY-DSKYRAATCSKYTELP 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YGT--SI 457
           YG E+ +K+ VA +GP+SVG++A+    F Y  GV        ++N  +    YG     
Sbjct: 232 YGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGVLNGK 291

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 292 EYWLVKNSWGRNFGEE 307



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 95/161 (59%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA++ +  C  
Sbjct: 158 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKATDQK--CQY 215

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A+    F Y  GV    +  C
Sbjct: 216 -DSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGV--YYEPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG    K+     YW+VKNSWG ++GE+
Sbjct: 273 TQNV-NHGVLVVGYGVLNGKE-----YWLVKNSWGRNFGEE 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQ 165


>gi|355558399|gb|EHH15179.1| hypothetical protein EGK_01236 [Macaca mulatta]
 gi|380809986|gb|AFE76868.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416071|gb|AFH31249.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416073|gb|AFH31250.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416075|gb|AFH31251.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416077|gb|AFH31252.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416079|gb|AFH31253.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
          Length = 331

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 117/196 (59%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA++ +  C   + +       +Y+ +P
Sbjct: 175 YGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKATDQK--CQY-DSKYRAATCSKYTELP 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YGT--SI 457
           YG E+ +K+ VA +GP+SVG++A+    F Y  GV        ++N  +    YG     
Sbjct: 232 YGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGVLNGK 291

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 292 EYWLVKNSWGRNFGEE 307



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 95/161 (59%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA++ +  C  
Sbjct: 158 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKATDQK--CQY 215

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A+    F Y  GV    +  C
Sbjct: 216 -DSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGV--YYEPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG    K+     YW+VKNSWG ++GE+
Sbjct: 273 TQNV-NHGVLVVGYGVLNGKE-----YWLVKNSWGRNFGEE 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQ 165


>gi|388512155|gb|AFK44139.1| unknown [Medicago truncatula]
          Length = 340

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 147/293 (50%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + K+Y    +  +R   F  NVE  E + + D+      VN   DL           
Sbjct: 44  MSEYGKLYKDAIEKEKRFMIFKDNVEFIESFNAADNKPYKLSVNHLADL----------- 92

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               TL++ + S    +     +    +F++ ++     +PEA DWR +G ++ +K+QG+
Sbjct: 93  ----TLDEFKASRNG-YKKIDREFATTSFKYENVTA---IPEAVDWRVKGAVTPIKDQGQ 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C  CWAFS V  +E ++ I    L  LS Q+LVDCD    + GC GG M+D  ++II NG
Sbjct: 145 CGSCWAFSTVAAIEGINQITTGKLISLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNG 204

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ S+  YPYKA++   G           K+  Y ++P   E  + K VA + P+SV ++
Sbjct: 205 GITSETNYPYKAAD---GSCSAATTAPVAKITGYEKVPVNSEISLLKAVANQ-PISVSID 260

Query: 435 A--NGLFYYSGGV------IDLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           A  +   +YS G+       +L+  +    YG++    YWIVKNSWG+ WGEK
Sbjct: 261 ASDSSFMFYSSGIYTGECGTELDHGVTAVGYGSANGTDYWIVKNSWGTVWGEK 313



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 17/164 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           +   KL  L+ ++LVDCD    + GC GG M+D  ++II NGG+ S+  YPYKA++   G
Sbjct: 163 ITTGKLISLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNGGITSETNYPYKAAD---G 219

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQ 608
                      K+  Y ++P   E  + K VA + P+SV ++A  +   +YS G+     
Sbjct: 220 SCSAATTAPVAKITGYEKVPVNSEISLLKAVANQ-PISVSIDASDSSFMFYSSGIYTGE- 277

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  +H +  VGYG     D     YWIVKNSWG+ WGEK
Sbjct: 278 --CGTEL-DHGVTAVGYGSANGTD-----YWIVKNSWGTVWGEK 313



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 19/155 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M ++ K+Y    +  +R   F  NVE  E +   D+      VN   DL      
Sbjct: 39  RHEQWMSEYGKLYKDAIEKEKRFMIFKDNVEFIESFNAADNKPYKLSVNHLADL------ 92

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                    TL++ + S    +     +    +F++ ++     +PEA DWR +G ++ +
Sbjct: 93  ---------TLDEFKASRNG-YKKIDREFATTSFKYENVTA---IPEAVDWRVKGAVTPI 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFS V  +E ++ I    L  LS Q
Sbjct: 140 KDQGQCGSCWAFSTVAAIEGINQITTGKLISLSEQ 174


>gi|224093956|ref|XP_002310053.1| predicted protein [Populus trichocarpa]
 gi|224147016|ref|XP_002336386.1| predicted protein [Populus trichocarpa]
 gi|222834869|gb|EEE73318.1| predicted protein [Populus trichocarpa]
 gi|222852956|gb|EEE90503.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 145/295 (49%), Gaps = 42/295 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + +VY    +   R+  F  NV + + + S+   +   GVN+F DL+  + +     
Sbjct: 43  MTQYGRVYKDDNERATRYSIFKENVARIDAFNSQTGKSYKLGVNQFADLTNEEFKA---- 98

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQ 314
                            S N+    M + Q    R+ +   +P   DWR EG ++ VK+Q
Sbjct: 99  -----------------SRNRFKGHMCSPQAGPFRYENVSAVPSTVDWRKEGAVTPVKDQ 141

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIID 372
           G+C CCWAFSAV  +E ++ +    L  LS Q++VDCD    + GCNGG MDDA ++I  
Sbjct: 142 GQCGCCWAFSAVAAMEGINKLTTGKLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQ 201

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           N G+ ++  YPYK ++    C   +      K+  +  +P   E  + K VA + P+SV 
Sbjct: 202 NKGLTTEANYPYKGTDGT--CNTNKAAIHAAKITGFEDVPANSEAALMKAVAKQ-PVSVA 258

Query: 433 MNANG--LFYYSGGVI--DLNQRL--------YGTS--IPYWIVKNSWGSDWGEK 473
           ++A G    +YS G+     + +L        YG S    YW+VKNSWG+ WGE+
Sbjct: 259 IDAGGSDFQFYSSGIFTGSCDTQLDHGVTAVGYGVSDGSKYWLVKNSWGAQWGEE 313



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 16/160 (10%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ +++VDCD    + GCNGG MDDA ++I  N G+ ++  YPYK ++    C   
Sbjct: 166 KLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEANYPYKGTDGT--CNTN 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +      K+  +  +P   E  + K VA + P+SV ++A G    +YS G+   +   C+
Sbjct: 224 KAAIHAAKITGFEDVPANSEAALMKAVAKQ-PVSVAIDAGGSDFQFYSSGIFTGS---CD 279

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DG+   YW+VKNSWG+ WGE+
Sbjct: 280 TQL-DHGVTAVGYGVS---DGSK--YWLVKNSWGAQWGEE 313



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 24/167 (14%)

Query: 35  RGYLNSPV-TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNK 93
           R  L++P+  R   +M  + +VY    +   R+  F  NV + + +  +   +    VN+
Sbjct: 28  RTLLDAPMYERHEQWMTQYGRVYKDDNERATRYSIFKENVARIDAFNSQTGKSYKLGVNQ 87

Query: 94  FFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEA 151
           F DL++ + +                      S N+    M + Q    R+ +   +P  
Sbjct: 88  FADLTNEEFKA---------------------SRNRFKGHMCSPQAGPFRYENVSAVPST 126

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            DWR EG ++ VK+QG+C CCWAFSAV  +E ++ +    L  LS Q
Sbjct: 127 VDWRKEGAVTPVKDQGQCGCCWAFSAVAAMEGINKLTTGKLISLSEQ 173


>gi|357160599|ref|XP_003578815.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 150/296 (50%), Gaps = 39/296 (13%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           E  +  + +VY    +  ++ E F  N    + + +E+      G+N+F DL+  + +  
Sbjct: 38  ETWMAQYGRVYKDAAEKAQKFEVFKANARFIDSFNAENH-KFWLGINQFADLTNEEFKA- 95

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                              F SN+       F++ +L+  + LP + DWR +G ++ VK+
Sbjct: 96  -------------TKTNKGFISNKARVST-GFKYENLKI-EALPTSIDWRTKGAVTPVKD 140

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYII 371
           QG+C CCWAFSAV   E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II
Sbjct: 141 QGQCGCCWAFSAVAATEGIVKLSTGKLVSLSEQELVDCDVHGEDQGCEGGLMDDAFKFII 200

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
            NGG+  + +YPY A + +  C  G +      +K Y  +P   E  + K VA + P+SV
Sbjct: 201 TNGGLTQESSYPYDAEDGK--CKSGSKSA--GTIKSYEDVPANNEGALMKAVANQ-PVSV 255

Query: 432 GMNANGLF--YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
            ++   +   +YSGGV+      DL+  +    YG +     +W++KNSWG+ WGE
Sbjct: 256 AVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGVTSDGTKFWLMKNSWGTTWGE 311



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+  + +YPY A + +  C  G
Sbjct: 166 KLVSLSEQELVDCDVHGEDQGCEGGLMDDAFKFIITNGGLTQESSYPYDAEDGK--CKSG 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
            +      +K Y  +P   E  + K VA + P+SV ++   +   +YSGGV+  +   C 
Sbjct: 224 SKSA--GTIKSYEDVPANNEGALMKAVANQ-PVSVAVDGGDMTFQFYSGGVMTGS---CG 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H +  +GYG     DGT   +W++KNSWG+ WGE   L
Sbjct: 278 TDL-DHGIAAIGYGVTS--DGTK--FWLMKNSWGTTWGENGFL 315



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 17/159 (10%)

Query: 40  SPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSD 99
           S   R   +M  + +VY    +  ++ E F  N    + +  E+       +N+F DL++
Sbjct: 32  SMAARHETWMAQYGRVYKDAAEKAQKFEVFKANARFIDSFNAENH-KFWLGINQFADLTN 90

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
            + +                     F SN+       F++ +L+  + LP + DWR +G 
Sbjct: 91  EEFKA--------------TKTNKGFISNKARVST-GFKYENLKI-EALPTSIDWRTKGA 134

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ VK+QG+C CCWAFSAV   E +  +    L  LS Q
Sbjct: 135 VTPVKDQGQCGCCWAFSAVAATEGIVKLSTGKLVSLSEQ 173


>gi|46251290|gb|AAS84611.1| cathepsin L-like cysteine proteinase I variant form precursor
           [Heterodera glycines]
          Length = 374

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/231 (39%), Positives = 122/231 (52%), Gaps = 31/231 (13%)

Query: 272 PFSSNQTDTEMRAFQFNSLRHG----------DDLPEAFDWRAEGVISKVKEQGKCACCW 321
           PFS  Q     R    +SLR             DLPE+ DWR +G +++VK QG C  CW
Sbjct: 122 PFSEYQKLNGFRRLMGDSLRRNASTFLAPMNVGDLPESVDWRDKGWVTEVKNQGMCGSCW 181

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSD 379
           AFSA G +E  H      L  LS Q L+DC    G  GCNGG MD+A QYI DN G+  +
Sbjct: 182 AFSATGALEGQHVRDKGHLVSLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNKGIDKE 241

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
            AYPYKA   ++ CL    +        Y+ I  G+EE+++  VAT+GP+SV ++A    
Sbjct: 242 TAYPYKAKTGKK-CLFKRND-VGATDSGYNDIAEGDEEDLRMAVATQGPVSVAIDAGHRS 299

Query: 440 Y--YSGGVI--------DLNQRL----YGTSIP---YWIVKNSWGSDWGEK 473
           +  Y+ GV         +L+  +    YGT      YWIVKNSWG+ WGE+
Sbjct: 300 FQLYTNGVYFEKECDPQNLDHGVLVEGYGTDPTQGDYWIVKNSWGTRWGEQ 350



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 12/159 (7%)

Query: 498 LSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ + L+DC    G  GCNGG MD+A QYI DN G+  + AYPYKA   ++ CL   
Sbjct: 200 LVSLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNKGIDKETAYPYKAKTGKK-CLFKR 258

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNP 613
            +        Y+ I  G+EE+++  VAT+GP+SV ++A    +  Y+ GV    ++ C+P
Sbjct: 259 ND-VGATDSGYNDIAEGDEEDLRMAVATQGPVSVAIDAGHRSFQLYTNGV--YFEKECDP 315

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  +H +++ GYG     D T   YWIVKNSWG+ WGE+
Sbjct: 316 QNLDHGVLVEGYG----TDPTQGDYWIVKNSWGTRWGEQ 350



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 10/86 (11%)

Query: 124 PFSSNQTDTEMRAFQFNSLRHG----------DDLPEAFDWRAEGVISKVKEQGKCACCW 173
           PFS  Q     R    +SLR             DLPE+ DWR +G +++VK QG C  CW
Sbjct: 122 PFSEYQKLNGFRRLMGDSLRRNASTFLAPMNVGDLPESVDWRDKGWVTEVKNQGMCGSCW 181

Query: 174 AFSAVGVVEAMHAIQGNNLTELSVQH 199
           AFSA G +E  H     +L  LS Q+
Sbjct: 182 AFSATGALEGQHVRDKGHLVSLSEQN 207


>gi|402856105|ref|XP_003892640.1| PREDICTED: cathepsin S isoform 1 [Papio anubis]
          Length = 331

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 117/196 (59%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA++ +  C   + +       +Y+ +P
Sbjct: 175 YGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKATDQK--CQY-DSKYRAATCSKYTELP 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YGT--SI 457
           YG E+ +K+ VA +GP+SVG++A+    F Y  GV        ++N  +    YG     
Sbjct: 232 YGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGVLNGK 291

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 292 EYWLVKNSWGRNFGEE 307



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 95/161 (59%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA++ +  C  
Sbjct: 158 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKATDQK--CQY 215

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A+    F Y  GV    +  C
Sbjct: 216 -DSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGV--YYEPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG    K+     YW+VKNSWG ++GE+
Sbjct: 273 TQNV-NHGVLVVGYGVLNGKE-----YWLVKNSWGRNFGEE 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQ 165


>gi|357458911|ref|XP_003599736.1| Cysteine proteinase [Medicago truncatula]
 gi|357474719|ref|XP_003607644.1| Cysteine proteinase [Medicago truncatula]
 gi|355488784|gb|AES69987.1| Cysteine proteinase [Medicago truncatula]
 gi|355508699|gb|AES89841.1| Cysteine proteinase [Medicago truncatula]
          Length = 340

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 145/295 (49%), Gaps = 43/295 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H KVY    +  +R   F  NVE  E + + D+      VN   DL           
Sbjct: 44  MTEHGKVYEDAIEKEKRFMIFKDNVEFIESFNAADNQPYKLSVNHLADL----------- 92

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQ 314
               TL++ + S       N      R F   S ++ +   +P A DWR +G ++ +K+Q
Sbjct: 93  ----TLDEFKAS------RNGYKKIDREFTTTSFKYENVTAIPAAVDWRVKGAVTPIKDQ 142

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIID 372
           G+C  CWAFS V   E ++ I    L  LS Q+LVDCD    + GC GG M+D  ++II 
Sbjct: 143 GQCGSCWAFSTVAATEGINQITTGKLVSLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIK 202

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S+  YPYKA++   G           K+  Y ++P   E+ + K VA + P+SV 
Sbjct: 203 NGGITSETNYPYKAAD---GSCNTATTTPVAKITGYEKVPVNSEKSLLKAVANQ-PISVS 258

Query: 433 MNA--NGLFYYSGGV------IDLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           ++A  +   +YS G+       +L+  +    YG++    YWIVKNSWG+ WGEK
Sbjct: 259 IDASDSSFMFYSSGIYTGECGTELDHGVTAVGYGSANGTDYWIVKNSWGTVWGEK 313



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 88/164 (53%), Gaps = 17/164 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           +   KL  L+ ++LVDCD    + GC GG M+D  ++II NGG+ S+  YPYKA++   G
Sbjct: 163 ITTGKLVSLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNGGITSETNYPYKAAD---G 219

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQ 608
                      K+  Y ++P   E+ + K VA + P+SV ++A  +   +YS G+     
Sbjct: 220 SCNTATTTPVAKITGYEKVPVNSEKSLLKAVANQ-PISVSIDASDSSFMFYSSGIYTGE- 277

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  +H +  VGYG     D     YWIVKNSWG+ WGEK
Sbjct: 278 --CGTEL-DHGVTAVGYGSANGTD-----YWIVKNSWGTVWGEK 313



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 23/157 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M +H KVY    +  +R   F  NVE  E +   D+      VN   DL      
Sbjct: 39  RHEQWMTEHGKVYEDAIEKEKRFMIFKDNVEFIESFNAADNQPYKLSVNHLADL------ 92

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVIS 161
                    TL++ + S       N      R F   S ++ +   +P A DWR +G ++
Sbjct: 93  ---------TLDEFKAS------RNGYKKIDREFTTTSFKYENVTAIPAAVDWRVKGAVT 137

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +K+QG+C  CWAFS V   E ++ I    L  LS Q
Sbjct: 138 PIKDQGQCGSCWAFSTVAATEGINQITTGKLVSLSEQ 174


>gi|114793879|pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra-
           14013
          Length = 217

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 116/197 (58%), Gaps = 23/197 (11%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTKK 60

Query: 355 --NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKV-KEYSRI 411
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +       +  ++    ++Y+ +
Sbjct: 61  YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK----CQYDSAYRAATCRKYTEL 116

Query: 412 PYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TS 456
           PYG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG    
Sbjct: 117 PYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNG 176

Query: 457 IPYWIVKNSWGSDWGEK 473
             YW+VKNSWG ++GEK
Sbjct: 177 KEYWLVKNSWGHNFGEK 193



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 95/162 (58%), Gaps = 18/162 (11%)

Query: 497 KLSRLATEKLVDCDMS---NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +     
Sbjct: 44  KLVSLSAQNLVDCSTKKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK----C 99

Query: 554 GEEEGFKVKV-KEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRL 610
             +  ++    ++Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  
Sbjct: 100 QYDSAYRAATCRKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPS 157

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           C     NH +++VGYG+   K+     YW+VKNSWG ++GEK
Sbjct: 158 CTQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEK 193



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 52


>gi|116786550|gb|ABK24153.1| unknown [Picea sitchensis]
          Length = 394

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 142/309 (45%), Gaps = 58/309 (18%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL-QQLTG 255
           V+  +K YS  E+  RR   F  N+ KA  +Q  D   A+ G+NKF DL+E +  +Q  G
Sbjct: 79  VKKFNKEYSGAEEHARRFSIFKKNLHKALRHQKLDR-DAIHGINKFSDLTEEEFHEQYLG 137

Query: 256 LNLD--STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
           L     S  +  QP+   P                     DDLP  FDWR  G ++ VK 
Sbjct: 138 LTTPPRSLSQRTQPAPILP--------------------TDDLPPDFDWRELGAVTPVKN 177

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC---------DMSNGGCNGGRMD 364
           QG C  CW FS  G +E  + ++   L  LS QQLVDC         D+ + GCNGG M 
Sbjct: 178 QGACGSCWTFSTTGAMEGANFMKTGKLISLSEQQLVDCDHECDSSEPDVCDSGCNGGLMT 237

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
            A QY +  GG+  ++ YPY   +   G    +       V  +S +   +E+++   + 
Sbjct: 238 TAYQYALKAGGLQREEDYPYTGID---GSCKFDNTKVAAMVANFSTVSI-DEDQIAANLV 293

Query: 425 TRGPLSVGMNANGLFYYSGGV----------IDLNQRLYG-----------TSIPYWIVK 463
             GPL+VG+NA  +  Y GGV          +D    L G            + P+WI+K
Sbjct: 294 KNGPLAVGINAAFMQTYVGGVSCPYVCNKQNLDHGVLLVGYGAAGYAPGRLKNKPFWIIK 353

Query: 464 NSWGSDWGE 472
           NSWG DWGE
Sbjct: 354 NSWGPDWGE 362



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 17/166 (10%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD         + + GCNGG M  A QY +  GG+  ++ YPY   + 
Sbjct: 203 KLISLSEQQLVDCDHECDSSEPDVCDSGCNGGLMTTAYQYALKAGGLQREEDYPYTGID- 261

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    +       V  +S +   +E+++   +   GPL+VG+NA  +  Y GGV    
Sbjct: 262 --GSCKFDNTKVAAMVANFSTVSI-DEDQIAANLVKNGPLAVGINAAFMQTYVGGVS--C 316

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDG--TSIPYWIVKNSWGSDWGE 651
             +CN +  +H +++VGYG      G   + P+WI+KNSWG DWGE
Sbjct: 317 PYVCNKQNLDHGVLLVGYGAAGYAPGRLKNKPFWIIKNSWGPDWGE 362



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 25/167 (14%)

Query: 35  RGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKF 94
           RG LN+    F +F++  +K YS  E+  RR   F  N+ KA  +Q+ D   A+  +NKF
Sbjct: 66  RGLLNAEA-HFAHFVKKFNKEYSGAEEHARRFSIFKKNLHKALRHQKLDR-DAIHGINKF 123

Query: 95  FDLSDSDL-QQLTGLNLD--STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEA 151
            DL++ +  +Q  GL     S  +  QP+   P                     DDLP  
Sbjct: 124 SDLTEEEFHEQYLGLTTPPRSLSQRTQPAPILP--------------------TDDLPPD 163

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           FDWR  G ++ VK QG C  CW FS  G +E  + ++   L  LS Q
Sbjct: 164 FDWRELGAVTPVKNQGACGSCWTFSTTGAMEGANFMKTGKLISLSEQ 210


>gi|8468607|gb|AAF75547.1| cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 142/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  +       N
Sbjct: 43  QKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFWSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P +                      P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  IP  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEGSYPYASGEGISPPCTTSGHTVGATITGHVEIPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYW++KNSW + WGE    ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWVIKNSWTTHWGEGGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTEGSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  IP  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVEIPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYW++KNSW + WGE
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWVIKNSWTTHWGE 312



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 18/156 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  + 
Sbjct: 36  SQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEF 94

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
                 N  +     Q   + P +                      P A DWRA G ++ 
Sbjct: 95  WSRYH-NGAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTA 137

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 138 VKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|18401420|ref|NP_565649.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|4314384|gb|AAD15594.1| cysteine proteinase [Arabidopsis thaliana]
 gi|17381154|gb|AAL36389.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|20465849|gb|AAM20029.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|330252901|gb|AEC07995.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 348

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 143/290 (49%), Gaps = 30/290 (10%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGLNLD 259
           ++VYS   +   R   F  N+E  +++   +  T    +N+F DL++ + +   TGL   
Sbjct: 43  NRVYSDETEKRNRFNIFKKNLEFVQNFNMNNKITYKVDINEFSDLTDEEFRATHTGL--- 99

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                + P      S+  +      F++ ++    D  E+ DWR EG ++ VK QG+C  
Sbjct: 100 -----VVPEAITRISTLSSGKNTVPFRYGNV---SDNGESMDWRQEGAVTPVKYQGRCGG 151

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFSAV  VE +  I    L  LS QQL+DCD   N GC GG M  A +YII N G+ +
Sbjct: 152 CWAFSAVAAVEGITKITKGELVSLSEQQLLDCDRDYNQGCRGGIMSKAFEYIIKNQGITT 211

Query: 379 DQAYPYKASESERGCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +  YPY+ S+            F+   +  Y  +P   EE + + V+ + P+SVG+   G
Sbjct: 212 EDNYPYQESQQTCSSSTTLSSSFRAATISGYETVPMNNEEALLQAVSQQ-PVSVGIEGTG 270

Query: 438 --LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
               +YSGGV       DL+  +    YG S     YW+VKNSWG  WGE
Sbjct: 271 AAFRHYSGGVFNGECGTDLHHAVTIVGYGMSEEGTKYWVVKNSWGETWGE 320



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 89/166 (53%), Gaps = 13/166 (7%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +T +   +L  L+ ++L+DCD   N GC GG M  A +YII N G+ ++  YPY+ S+  
Sbjct: 164 ITKITKGELVSLSEQQLLDCDRDYNQGCRGGIMSKAFEYIIKNQGITTEDNYPYQESQQT 223

Query: 549 RGCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
                     F+   +  Y  +P   EE + + V+ + P+SVG+   G    +YSGGV +
Sbjct: 224 CSSSTTLSSSFRAATISGYETVPMNNEEALLQAVSQQ-PVSVGIEGTGAAFRHYSGGVFN 282

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                C     +HA+ IVGYG  E  +GT   YW+VKNSWG  WGE
Sbjct: 283 GE---CGTDL-HHAVTIVGYGMSE--EGTK--YWVVKNSWGETWGE 320



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 15/184 (8%)

Query: 20  FMIKVAL-LESNIFQTRGYL--NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA 76
           F++ + L   +++  +RG L   S + +   +M   ++VYS   +   R   F  N+E  
Sbjct: 7   FILTIFLSYRTSLATSRGSLFEASAIEKHEQWMARFNRVYSDETEKRNRFNIFKKNLEFV 66

Query: 77  EDYQREDSGTAVFEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMR 135
           +++   +  T   ++N+F DL+D + +   TGL        + P      S+  +     
Sbjct: 67  QNFNMNNKITYKVDINEFSDLTDEEFRATHTGL--------VVPEAITRISTLSSGKNTV 118

Query: 136 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTEL 195
            F++ ++    D  E+ DWR EG ++ VK QG+C  CWAFSAV  VE +  I    L  L
Sbjct: 119 PFRYGNV---SDNGESMDWRQEGAVTPVKYQGRCGGCWAFSAVAAVEGITKITKGELVSL 175

Query: 196 SVQH 199
           S Q 
Sbjct: 176 SEQQ 179


>gi|340053968|emb|CCC48262.1| cysteine peptidase, Clan CA, family C1,Cathepsin L-like, fragment,
           partial [Trypanosoma vivax Y486]
          Length = 323

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 39/293 (13%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG-- 255
           Q + + Y +  +   R   F  N+ ++  Y + +   A FGV  F DL+  + +      
Sbjct: 39  QKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRTRYHNG 97

Query: 256 -LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
             + ++    ++  +Q P                        P A DWR +G ++ VK+Q
Sbjct: 98  ERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVTPVKDQ 137

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--D 372
           G+C  CW+FSA+G +E   A  GN LT LS Q LV CD  + GC GG MD+A ++I+  +
Sbjct: 138 GRCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKEN 197

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           +G V ++++YPY + +  +   +         +  +  IP+ +E+ + K++A  GP++V 
Sbjct: 198 SGKVYTEKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPH-DEDAIAKYLADNGPVAVA 256

Query: 433 MNANGLFYYSGGVID------LNQRLY------GTSIPYWIVKNSWGSDWGEK 473
           ++A     YSGGV+       LN  +        +  PYWI+KNSW S WGEK
Sbjct: 257 VDATTFMSYSGGVVTSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEK 309



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 91/157 (57%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD  + GC GG MD+A ++I+  ++G V ++++YPY + +  +   +  
Sbjct: 163 LTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKENSGKVYTEKSYPYVSEDGSKPFCIPY 222

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  IP+ +E+ + K++A  GP++V ++A     YSGGV+      C  +A
Sbjct: 223 GHEVGATITGHVDIPH-DEDAIAKYLADNGPVAVAVDATTFMSYSGGVVTS----CTSEA 277

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NH +++VGY +  K      PYWI+KNSW S WGEK
Sbjct: 278 LNHGVLLVGYNDSSKP-----PYWIIKNSWSSSWGEK 309



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 24/157 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F + + + Y +  +   R   F  N+ ++  Y   +   A F V  F DL+  + + 
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRT 92

Query: 105 LTG---LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                  + ++    ++  +Q P                        P A DWR +G ++
Sbjct: 93  RYHNGERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVT 132

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG+C  CW+FSA+G +E   A  GN LT LS Q
Sbjct: 133 PVKDQGRCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQ 169


>gi|8468605|gb|AAF75546.1| cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 142/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P +                      P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC GG M++A  +I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCGGGLMNNAFGWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTENSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYWI+KNSW + WGE    ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTAQWGEDGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 86/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC GG M++A  +I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCGGGLMNNAFGWIVQENNGAVYTENSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYWI+KNSW + WGE
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWIIKNSWTAQWGE 312



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  + 
Sbjct: 36  SQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEF 94

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +     N  +     Q   + P +                      P A DWRA G ++ 
Sbjct: 95  RSRYH-NGAAHFAAAQERARVPVNVEVVGA----------------PAAVDWRARGAVTA 137

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 138 VKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|224136808|ref|XP_002326950.1| predicted protein [Populus trichocarpa]
 gi|222835265|gb|EEE73700.1| predicted protein [Populus trichocarpa]
          Length = 456

 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 147/288 (51%), Gaps = 35/288 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+++ +  +R E F  N+   + + SE+  T   G+N+F DL+  + + +  L   
Sbjct: 49  HGKNYNALGEKEKRFEIFKDNLMFIDQHNSENR-TYTVGLNRFADLTNEEFRSMY-LGTR 106

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +  +   P     ++                R GD LP++ DWR EG +++VK+QG C  
Sbjct: 107 TGHKKRLPKTSDRYAP---------------RVGDSLPDSVDWRKEGAVAEVKDQGGCGS 151

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+NGG+ +
Sbjct: 152 CWAFSTIAAVEGINKIVTGDLIALSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDT 211

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           +  YPY   +    C    +    V +  Y  +P  +E  +KK VA + P+SV +   G 
Sbjct: 212 EDDYPYLGRDGR--CDTYRKNAKVVSIDSYEDVPENDETALKKAVANQ-PVSVAIEGGGR 268

Query: 439 FY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            +  Y+ GV        L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 269 NFQLYNSGVFTGECGTSLDHGVAAVGYGTEKGKDYWIVRNSWGKSWGE 316



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ ++  YPY   +  
Sbjct: 164 INKIVTGDLIALSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDTEDDYPYLGRDGR 223

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P  +E  +KK VA + P+SV +   G  +  Y+ GV   
Sbjct: 224 --CDTYRKNAKVVSIDSYEDVPENDETALKKAVANQ-PVSVAIEGGGRNFQLYNSGVFTG 280

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   + +H +  VGYG E+ KD     YWIV+NSWG  WGE
Sbjct: 281 E---CG-TSLDHGVAAVGYGTEKGKD-----YWIVRNSWGKSWGE 316



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 17/151 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++  H K Y+++ +  +R E F  N+   + +  E+  T    +N+F DL++ + + +  
Sbjct: 45  WLVKHGKNYNALGEKEKRFEIFKDNLMFIDQHNSENR-TYTVGLNRFADLTNEEFRSMY- 102

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           L   +  +   P     ++                R GD LP++ DWR EG +++VK+QG
Sbjct: 103 LGTRTGHKKRLPKTSDRYAP---------------RVGDSLPDSVDWRKEGAVAEVKDQG 147

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS +  VE ++ I   +L  LS Q
Sbjct: 148 GCGSCWAFSTIAAVEGINKIVTGDLIALSEQ 178


>gi|326430491|gb|EGD76061.1| cathepsin [Salpingoeca sp. ATCC 50818]
          Length = 381

 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 140/285 (49%), Gaps = 38/285 (13%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS---GTAVFGVNKFFDLSESDLQQLTGLN 257
           +K Y S E+  RR   F  N+     + +E +    T   GVN+F DL+  + +QL    
Sbjct: 28  EKQYESPEEEARRFAIFADNLAFIARHNAEAARGLHTHTVGVNQFADLTNEEYRQL---- 83

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
                         P+ +     E +    +    G     + DWR +G ++ +K QG+C
Sbjct: 84  -----------YLRPYPTELLGRERQEVWLDGPNAG-----SVDWRQKGAVTPIKNQGQC 127

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGG 375
             CW+FS  G VE  HAI   +L  LS QQLVDC  S  N GCNGG MD+A +YII NGG
Sbjct: 128 GSCWSFSTTGSVEGAHAIATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDNAFKYIISNGG 187

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++Q YPY A +    C   +E    V +  Y  +P   E+++   V  +GP+SV + A
Sbjct: 188 LDTEQDYPYTARDGV--CDKSKESKHAVSISGYKDVPQNNEDQLAAAV-EKGPVSVAIEA 244

Query: 436 NGLFY--YSGGV--------IDLNQRLYGTSIPYWIVKNSWGSDW 470
           +   +  YS GV        +D    + G +  YWIVKNSWG+ W
Sbjct: 245 DQQSFQMYSSGVFSGPCGTNLDHGVLVVGYTSDYWIVKNSWGASW 289



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 85/163 (52%), Gaps = 24/163 (14%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           +    L  L+ ++LVDC  S  N GCNGG MD+A +YII NGG+ ++Q YPY A +    
Sbjct: 145 IATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDNAFKYIISNGGLDTEQDYPYTARDGV-- 202

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQ 608
           C   +E    V +  Y  +P   E+++   V  +GP+SV + A+   +  YS GV     
Sbjct: 203 CDKSKESKHAVSISGYKDVPQNNEDQLAAAV-EKGPVSVAIEADQQSFQMYSSGVFS--- 258

Query: 609 RLCNPKAQN--HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDW 649
               P   N  H +++VGY  +         YWIVKNSWG+ W
Sbjct: 259 ---GPCGTNLDHGVLVVGYTSD---------YWIVKNSWGASW 289



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 23/158 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS---GTAVFEVNKFFDLSDSD 101
           F +F    +K Y S E+  RR   F  N+     +  E +    T    VN+F DL++ +
Sbjct: 20  FDDFKTTFEKQYESPEEEARRFAIFADNLAFIARHNAEAARGLHTHTVGVNQFADLTNEE 79

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +QL                  P+ +     E +    +    G     + DWR +G ++
Sbjct: 80  YRQL---------------YLRPYPTELLGRERQEVWLDGPNAG-----SVDWRQKGAVT 119

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +K QG+C  CW+FS  G VE  HAI   NL  LS Q 
Sbjct: 120 PIKNQGQCGSCWSFSTTGSVEGAHAIATGNLVSLSEQQ 157


>gi|357474579|ref|XP_003607574.1| Cysteine protease [Medicago truncatula]
 gi|355508629|gb|AES89771.1| Cysteine protease [Medicago truncatula]
          Length = 345

 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 141/292 (48%), Gaps = 37/292 (12%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
           H+ KVY  +++   R + F  NV   E   S ++G      NK + L  +    +T    
Sbjct: 47  HYGKVYKDLQERENRLKIFKENVNYIE--ASNNAGN-----NKLYKLGINQFADITNEEF 99

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
            ++    +  + +  +   T      F++ +      +P   DWR +G ++ VK QG+C 
Sbjct: 100 IASRNKFKGHMCSSITKTST------FKYENA----SVPSTVDWRKKGAVTPVKNQGQCG 149

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGV 376
           CCWAFSAV   E +H +    L  LS Q+LVDCD    + GC GG MDDA ++II N G+
Sbjct: 150 CCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGL 209

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPY+  +    C   E       +  Y  +P   E  ++K VA + P+SV ++A+
Sbjct: 210 HTEAQYPYQGVDGT--CSANETSTPAATIAGYEDVPANNENALQKAVANQ-PISVAIDAS 266

Query: 437 G---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           G    FY SG            GV  +   +      YW+VKNSWG+DWGE+
Sbjct: 267 GSDFQFYKSGVFTGSCGTQLDHGVTAVGYGISNDGTKYWLVKNSWGNDWGEE 318



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG MDDA ++II N G+ ++  YPY+  +    C   
Sbjct: 170 KLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLHTEAQYPYQGVDGT--CSAN 227

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           E       +  Y  +P   E  ++K VA + P+SV ++A+G    +Y  GV   +   C 
Sbjct: 228 ETSTPAATIAGYEDVPANNENALQKAVANQ-PISVAIDASGSDFQFYKSGVFTGS---CG 283

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG+DWGE+
Sbjct: 284 TQL-DHGVTAVGYGIS--NDGT--KYWLVKNSWGNDWGEE 318



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 17/151 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           +M  + KVY  +++   R + F  NV   E     ++G      NK + L  +    +T 
Sbjct: 44  WMVHYGKVYKDLQERENRLKIFKENVNYIE--ASNNAGN-----NKLYKLGINQFADITN 96

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
               ++    +  + +  +   T      F++ +      +P   DWR +G ++ VK QG
Sbjct: 97  EEFIASRNKFKGHMCSSITKTST------FKYENA----SVPSTVDWRKKGAVTPVKNQG 146

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +C CCWAFSAV   E +H +    L  LS Q
Sbjct: 147 QCGCCWAFSAVAATEGIHKLSTGKLVSLSEQ 177


>gi|357507505|ref|XP_003624041.1| Cysteine proteinase [Medicago truncatula]
 gi|355499056|gb|AES80259.1| Cysteine proteinase [Medicago truncatula]
          Length = 342

 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 143/287 (49%), Gaps = 43/287 (14%)

Query: 203 VYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTL 262
           VY  V +  +  + F  NV   + + +  +      +N+F               +D  +
Sbjct: 52  VYKDVAEQKKHFQIFKHNVAYIDYFNAAGNKPYKLAINRF---------------VDKPI 96

Query: 263 EDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWA 322
           ED        F    T T    F++ ++    D+P   DWR  G ++ +K QGKC  CWA
Sbjct: 97  EDSDDG----FERTTTTTPTTTFKYENV---TDIPATVDWRKRGAVTPIKNQGKCGSCWA 149

Query: 323 FSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQ 380
           FSAV  +E +  I   +L  LS QQLVDCD S    GC+ G M +A ++I++NGG+ ++ 
Sbjct: 150 FSAVAAIEGIQKITSGNLVSLSEQQLVDCDRSGRTKGCDNGNMINAFKFILENGGIATEA 209

Query: 381 AYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF- 439
            YPYK     +G    ++   KV++K Y  +P   E+ + K VA + P+SVG++  G+F 
Sbjct: 210 NYPYK--RVVKGTC--KKVSHKVQIKSYEEVPSNSEDSLLKAVANQ-PVSVGIDMRGMFK 264

Query: 440 YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
           +YS G+         N  L    YGTS   I YW+VKNSW   WGEK
Sbjct: 265 FYSSGIFTGECGTKPNHALTIVGYGTSKDGIKYWLVKNSWSKRWGEK 311



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 96/166 (57%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  +    L  L+ ++LVDCD S    GC+ G M +A ++I++NGG+ ++  YPYK    
Sbjct: 159 IQKITSGNLVSLSEQQLVDCDRSGRTKGCDNGNMINAFKFILENGGIATEANYPYK--RV 216

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF-YYSGGVIDL 606
            +G    ++   KV++K Y  +P   E+ + K VA + P+SVG++  G+F +YS G+   
Sbjct: 217 VKGTC--KKVSHKVQIKSYEEVPSNSEDSLLKAVANQ-PVSVGIDMRGMFKFYSSGIFTG 273

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  K  NHAL IVGYG    KDG  I YW+VKNSW   WGEK
Sbjct: 274 E---CGTKP-NHALTIVGYGTS--KDG--IKYWLVKNSWSKRWGEK 311



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 26/158 (16%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFD--LSDSD 101
           RF  +   +  VY  V +  +  + F  NV   + +    +      +N+F D  + DSD
Sbjct: 41  RFEYWKTKYGVVYKDVAEQKKHFQIFKHNVAYIDYFNAAGNKPYKLAINRFVDKPIEDSD 100

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                                  F    T T    F++ ++    D+P   DWR  G ++
Sbjct: 101 ---------------------DGFERTTTTTPTTTFKYENV---TDIPATVDWRKRGAVT 136

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +K QGKC  CWAFSAV  +E +  I   NL  LS Q 
Sbjct: 137 PIKNQGKCGSCWAFSAVAAIEGIQKITSGNLVSLSEQQ 174


>gi|62526575|gb|AAX84673.1| cysteine protease CP1 [Manihot esculenta]
          Length = 467

 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 149/286 (52%), Gaps = 34/286 (11%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           KVY+++ +  +R + F  N+   +++ SE+  T   G+N F DL               T
Sbjct: 61  KVYNALGEREKRFQVFKDNLRFIDEHNSENR-TYKLGLNGFADL---------------T 104

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            E+ + +        + +   +     + R G+ LP++ DWR EG +++VK+QG C  CW
Sbjct: 105 NEEYRSTYLGARGGMKRNRLRKTSDRYAPRVGESLPDSVDWRKEGAVAEVKDQGSCGSCW 164

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQ 380
           AFS +  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II+NGG+ +++
Sbjct: 165 AFSTIAAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDTEE 224

Query: 381 AYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--L 438
            YPY A +    C    +    V + +Y  +P   E  ++K VA + P+SV + A G   
Sbjct: 225 DYPYLARDGR--CDTYRKNAKVVTIDDYEDVPVNSETALQKAVANQ-PVSVAIEAGGRDF 281

Query: 439 FYYSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            +Y+ G+        L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 282 QFYASGIFSGRCGTQLDHGVAAVGYGTENGKDYWIVRNSWGKSWGE 327



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 92/169 (54%), Gaps = 15/169 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +++ YPY A +  
Sbjct: 175 INKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYLARDGR 234

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C    +    V + +Y  +P   E  ++K VA + P+SV + A G    +Y+ G+   
Sbjct: 235 --CDTYRKNAKVVTIDDYEDVPVNSETALQKAVANQ-PVSVAIEAGGRDFQFYASGIF-- 289

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               C  +  +H +  VGYG E  KD     YWIV+NSWG  WGE   L
Sbjct: 290 -SGRCGTQL-DHGVAAVGYGTENGKD-----YWIVRNSWGKSWGENGYL 331



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 16/145 (11%)

Query: 54  KVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDST 113
           KVY+++ +  +R + F  N+   +++  E+  T    +N F DL++ + +        ST
Sbjct: 61  KVYNALGEREKRFQVFKDNLRFIDEHNSENR-TYKLGLNGFADLTNEEYR--------ST 111

Query: 114 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 173
               +  ++       +D         + R G+ LP++ DWR EG +++VK+QG C  CW
Sbjct: 112 YLGARGGMKRNRLRKTSDRY-------APRVGESLPDSVDWRKEGAVAEVKDQGSCGSCW 164

Query: 174 AFSAVGVVEAMHAIQGNNLTELSVQ 198
           AFS +  VE ++ I   +L  LS Q
Sbjct: 165 AFSTIAAVEGINKIVTGDLISLSEQ 189


>gi|357167190|ref|XP_003581045.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like
           [Brachypodium distachyon]
          Length = 415

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 164/324 (50%), Gaps = 43/324 (13%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           AC  A SA+   +    +      E  +  + +VY+ V +  +R E F  NV   E    
Sbjct: 88  ACTCAVSALAARDLTDDLSMVARHEQWMAKYGRVYNDVAEKAQRLEVFKANVAFIELV-- 145

Query: 230 EDSGTAVFGV--NKFFDLSESDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 286
            ++G   F +  N+F D++  + +   TG                P  +N+  T    + 
Sbjct: 146 -NAGNDKFSLEANQFADMTVDEFRAAHTGYK--------------PVPANKGRTTQFKYA 190

Query: 287 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQ 346
             SL   D LP + DWRA+G ++ +K+QG+C CCWAFS V  VE +  +    L  LS Q
Sbjct: 191 NVSL---DALPASMDWRAKGAVTPIKDQGQCGCCWAFSTVASVEGIVKLSTGKLISLSEQ 247

Query: 347 QLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVK 404
           +LVDCD+   + GC GG MD+A ++IIDNGG+ ++  YPY  ++    C   +E      
Sbjct: 248 ELVDCDVDGMDQGCEGGLMDNAFEFIIDNGGLTTEGNYPYTGTDDS--CNSNKESNDVAS 305

Query: 405 VKEYSRIPYGEEEEMKKWVATRGPLSVGMN-ANGLF-YYSGGVI------DLNQRL---- 452
           +K Y  +P  +E  + K VA + P+S+ ++  + LF +Y GGV+      +L+  +    
Sbjct: 306 IKGYEDVPSNDETSLLKAVAAQ-PVSIAVDGGDNLFRFYKGGVLSGACGTELDHGIAAVG 364

Query: 453 YGTS---IPYWIVKNSWGSDWGEK 473
           YG +     +W++KNSWG+ WGEK
Sbjct: 365 YGITSDGTKFWLMKNSWGTSWGEK 388



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MD+A ++IIDNGG+ ++  YPY  ++    C   
Sbjct: 240 KLISLSEQELVDCDVDGMDQGCEGGLMDNAFEFIIDNGGLTTEGNYPYTGTDDS--CNSN 297

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN-ANGLF-YYSGGVIDLNQRLCN 612
           +E      +K Y  +P  +E  + K VA + P+S+ ++  + LF +Y GGV+      C 
Sbjct: 298 KESNDVASIKGYEDVPSNDETSLLKAVAAQ-PVSIAVDGGDNLFRFYKGGVL---SGACG 353

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   +W++KNSWG+ WGEK
Sbjct: 354 TE-LDHGIAAVGYG--ITSDGTK--FWLMKNSWGTSWGEK 388



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 19/193 (9%)

Query: 8   SLGEKGLGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHE 67
           ++  + LG+L   +     + +   +      S V R   +M  + +VY+ V +  +R E
Sbjct: 74  TMASRSLGFLIAILACTCAVSALAARDLTDDLSMVARHEQWMAKYGRVYNDVAEKAQRLE 133

Query: 68  NFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQPSLQAPFS 126
            F  NV   E     +   ++ E N+F D++  + +   TG                P  
Sbjct: 134 VFKANVAFIELVNAGNDKFSL-EANQFADMTVDEFRAAHTGYK--------------PVP 178

Query: 127 SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHA 186
           +N+  T    +   SL   D LP + DWRA+G ++ +K+QG+C CCWAFS V  VE +  
Sbjct: 179 ANKGRTTQFKYANVSL---DALPASMDWRAKGAVTPIKDQGQCGCCWAFSTVASVEGIVK 235

Query: 187 IQGNNLTELSVQH 199
           +    L  LS Q 
Sbjct: 236 LSTGKLISLSEQE 248


>gi|357474523|ref|XP_003607546.1| Cysteine proteinase [Medicago truncatula]
 gi|358347207|ref|XP_003637651.1| Cysteine proteinase [Medicago truncatula]
 gi|355503586|gb|AES84789.1| Cysteine proteinase [Medicago truncatula]
 gi|355508601|gb|AES89743.1| Cysteine proteinase [Medicago truncatula]
          Length = 345

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 151/303 (49%), Gaps = 47/303 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKF--------------FDL 245
           H +  S VE + +R + +V        Y+  D     FG+ +               ++L
Sbjct: 32  HKQKSSDVEAMKKRFDGWVK--RHGRKYKHNDEREVRFGIYQANVQYIQCKNAQKNSYNL 89

Query: 246 SESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
           +++    LT     ST   +   L++  +  + D            HGD LPE+ DWR E
Sbjct: 90  TDNKFADLTNEEFQSTYMGLSTRLRSHNTGFRYD-----------EHGD-LPESKDWRKE 137

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRM 363
           G ++++ +QG+C  CWAF+AV  VE ++ I+   L  LS Q+L+DCD+ +G  GC GG M
Sbjct: 138 GAVTEIMDQGQCGGCWAFAAVAAVEGINKIKSGKLISLSEQELIDCDVKSGNQGCQGGLM 197

Query: 364 DDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWV 423
           + A  +II+NGG+ ++Q YPY+  +    C + +   +   +  Y  +P   E ++K   
Sbjct: 198 ETAYTFIIENGGLTTEQDYPYEGVDGT--CKMEKAAHYAASISGYEEVPADNEAKLKA-A 254

Query: 424 ATRGPLSVGMNANG--LFYYSGGVID------LNQRL----YG--TSIPYWIVKNSWGSD 469
           A   P+SV ++A G    +YS GV        LN  +    YG  T   YWIVKNSWG+D
Sbjct: 255 AAHQPVSVAIDAGGYSFQFYSEGVFSGICGKQLNHGVTVVGYGKETINKYWIVKNSWGAD 314

Query: 470 WGE 472
           WGE
Sbjct: 315 WGE 317



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  +   KL  L+ ++L+DCD+ +G  GC GG M+ A  +II+NGG+ ++Q YPY+  + 
Sbjct: 164 INKIKSGKLISLSEQELIDCDVKSGNQGCQGGLMETAYTFIIENGGLTTEQDYPYEGVDG 223

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C + +   +   +  Y  +P   E ++K   A   P+SV ++A G    +YS GV  
Sbjct: 224 T--CKMEKAAHYAASISGYEEVPADNEAKLKA-AAAHQPVSVAIDAGGYSFQFYSEGVFS 280

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               +C  K  NH + +VGYG+E     T   YWIVKNSWG+DWGE
Sbjct: 281 ---GICG-KQLNHGVTVVGYGKE-----TINKYWIVKNSWGADWGE 317



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 21/155 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           RF  +++ H + Y   ++   R   +  NV+  +    + +   + + NKF DL++ + Q
Sbjct: 45  RFDGWVKRHGRKYKHNDEREVRFGIYQANVQYIQCKNAQKNSYNLTD-NKFADLTNEEFQ 103

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             T + L + L            S+ T      F+++   HGD LPE+ DWR EG ++++
Sbjct: 104 S-TYMGLSTRLR-----------SHNT-----GFRYD--EHGD-LPESKDWRKEGAVTEI 143

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +QG+C  CWAF+AV  VE ++ I+   L  LS Q
Sbjct: 144 MDQGQCGGCWAFAAVAAVEGINKIKSGKLISLSEQ 178


>gi|302763831|ref|XP_002965337.1| hypothetical protein SELMODRAFT_230602 [Selaginella moellendorffii]
 gi|300167570|gb|EFJ34175.1| hypothetical protein SELMODRAFT_230602 [Selaginella moellendorffii]
          Length = 343

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 161/338 (47%), Gaps = 56/338 (16%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A  +A +    +E   A++  N+ E     H K YSS  +  RR   F   +   E + +
Sbjct: 18  ATPFAIARPAALEDGRALEIKNMFEDWAAKHGKSYSSDLEKARRLMIFSDTLAYIEKHNA 77

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
           + + T   G+NKF DL+ ++ + +            +P  Q    +   D ++ +     
Sbjct: 78  QPNTTFTLGLNKFSDLTNAEFRAMHVGKFK------RPRYQDRLPAEDEDVDVSS----- 126

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                 LP + DWR +G ++ +K+QG C  CWAFSA+  +E+ H +    L  LS QQL+
Sbjct: 127 ------LPTSLDWRQKGAVTPIKDQGDCGSCWAFSAIASIESAHFLATKELVSLSEQQLM 180

Query: 350 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC-------LVGEEEGFK 402
           DCD  + GC+GG M+ A ++++ NGGV ++ +YPY  S              V E  GFK
Sbjct: 181 DCDTVDAGCDGGLMETAFKFVVKNGGVTTEASYPYTGSVGSCNANKVAIINKVAEITGFK 240

Query: 403 VKVKEYSRIPYGEEEEMKKWVATRGPLSV---GMNANGLFYYSG------------GVID 447
           V  ++ +      +  MK    ++ P++V   G + N   Y SG            GV+ 
Sbjct: 241 VVTEDSA------DALMK--AVSKTPVTVSICGSDENFQNYKSGILSGQCGDSLDHGVLL 292

Query: 448 LNQRLYGT--SIPYWIVKNSWGSDWGE----KVEDKVG 479
           +    YGT   +PYWI+KNSWG+ WGE    K+E K G
Sbjct: 293 IG---YGTEGGMPYWIIKNSWGTSWGEDGFMKIERKDG 327



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 22/162 (13%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC----- 551
           +L  L+ ++L+DCD  + GC+GG M+ A ++++ NGGV ++ +YPY  S           
Sbjct: 170 ELVSLSEQQLMDCDTVDAGCDGGLMETAFKFVVKNGGVTTEASYPYTGSVGSCNANKVAI 229

Query: 552 --LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
              V E  GFKV  ++ +      +  MK    T   +S+  +      Y  G++     
Sbjct: 230 INKVAEITGFKVVTEDSA------DALMKAVSKTPVTVSICGSDENFQNYKSGIL---SG 280

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   + +H ++++GYG E       +PYWI+KNSWG+ WGE
Sbjct: 281 QCG-DSLDHGVLLIGYGTE-----GGMPYWIIKNSWGTSWGE 316



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 17/155 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F ++   H K YSS  +  RR   F   +   E +  + + T    +NKF DL++++ + 
Sbjct: 41  FEDWAAKHGKSYSSDLEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRA 100

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +            +P  Q    +   D ++ +           LP + DWR +G ++ +K
Sbjct: 101 MHVGKFK------RPRYQDRLPAEDEDVDVSS-----------LPTSLDWRQKGAVTPIK 143

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +QG C  CWAFSA+  +E+ H +    L  LS Q 
Sbjct: 144 DQGDCGSCWAFSAIASIESAHFLATKELVSLSEQQ 178


>gi|109939734|sp|P25776.2|ORYA_ORYSJ RecName: Full=Oryzain alpha chain; Flags: Precursor
 gi|78192122|gb|ABB30151.1| oryzain alpha [Oryza sativa Japonica Group]
          Length = 458

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 152/291 (52%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H K Y++V +  RR+  F  N+   +++ +  D+G   F  G+N+F DL+  + +  T L
Sbjct: 47  HGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRD-TYL 105

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L +     +P  +   S      +  A           LPE+ DWR +G ++++K+QG 
Sbjct: 106 GLRN-----KPRRERKVSDRYLAADNEA-----------LPESVDWRTKGAVAEIKDQGG 149

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFSA+  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A  +II+NGG
Sbjct: 150 CGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGG 209

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPYK  + ER C V  +    V +  Y  +    E  ++K VA + P+SV + A
Sbjct: 210 IDTEDDYPYKGKD-ER-CDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQ-PVSVAIEA 266

Query: 436 NGLFY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            G  +  YS G+        L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 267 GGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGE 317



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A  +II+NGG+ ++  YPYK  + ER C
Sbjct: 168 IVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKD-ER-C 225

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
            V  +    V +  Y  +    E  ++K VA + P+SV + A G  +  YS G+      
Sbjct: 226 DVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQ-PVSVAIEAGGRAFQLYSSGIFTGK-- 282

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YWIV+NSWG  WGE
Sbjct: 283 -CG-TALDHGVAAVGYGTENGKD-----YWIVRNSWGKSWGE 317



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 47/264 (17%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +  +H K Y++V +  RR+  F  N+   +++    D+G   F +  N+F DL++ +
Sbjct: 40  YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEE 99

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +  T L L +     +P  +   S      +  A           LPE+ DWR +G ++
Sbjct: 100 YRD-TYLGLRN-----KPRRERKVSDRYLAADNEA-----------LPESVDWRTKGAVA 142

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED-----LLRRHEN 216
           ++K+QG C  CWAFSA+  VE ++ I   +L  LS Q      +S  +     L+    +
Sbjct: 143 EIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFD 202

Query: 217 FVTN---VEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQP----SL 269
           F+ N   ++  +DY  +       G ++  D++  + + +T   +DS  ED+ P    SL
Sbjct: 203 FIINNGGIDTEDDYPYK-------GKDERCDVNRKNAKVVT---IDS-YEDVTPNSETSL 251

Query: 270 QAPFSSNQTDTEM----RAFQFNS 289
           Q   ++      +    RAFQ  S
Sbjct: 252 QKAVANQPVSVAIEAGGRAFQLYS 275


>gi|115484973|ref|NP_001067630.1| Os11g0255300 [Oryza sativa Japonica Group]
 gi|530335|emb|CAA56844.1| cysteine protease [Oryza sativa Japonica Group]
 gi|5761322|dbj|BAA83472.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|62732672|gb|AAX94791.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|62732673|gb|AAX94792.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|62732674|gb|AAX94793.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|77549615|gb|ABA92412.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|77549616|gb|ABA92413.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|77549617|gb|ABA92414.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113644852|dbj|BAF27993.1| Os11g0255300 [Oryza sativa Japonica Group]
 gi|125576789|gb|EAZ18011.1| hypothetical protein OsJ_33558 [Oryza sativa Japonica Group]
 gi|215701098|dbj|BAG92522.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 378

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 117/205 (57%), Gaps = 23/205 (11%)

Query: 289 SLRHG----DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELS 344
           S R+G    D+LP A DWR  G ++ +K+QG+C  CWAFS V  VE ++ I+   L  LS
Sbjct: 132 SFRYGGDDEDNLPPAVDWRERGAVTGIKDQGQCGSCWAFSTVAAVEGVNKIKTGRLVTLS 191

Query: 345 VQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKV 403
            Q+LVDCD   N GC+GG MD A Q+I  NGG+ ++  YPY+A +    C   +     V
Sbjct: 192 EQELVDCDTGDNQGCDGGLMDYAFQFIKRNGGITTESNYPYRAEQGR--CNKAKASSHDV 249

Query: 404 KVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL--- 452
            +  Y  +P  +E  ++K VA + P++V + A+G    +YS GV       DL+  +   
Sbjct: 250 TIDGYEDVPANDESALQKAVANQ-PVAVAVEASGQDFQFYSEGVFTGECGTDLDHGVAAV 308

Query: 453 -YGTS---IPYWIVKNSWGSDWGEK 473
            YG +     YWIVKNSWG DWGE+
Sbjct: 309 GYGITRDGTKYWIVKNSWGEDWGER 333



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 92/169 (54%), Gaps = 17/169 (10%)

Query: 490 LTGVLPSKLSRLAT---EKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKAS 545
           + GV   K  RL T   ++LVDCD   N GC+GG MD A Q+I  NGG+ ++  YPY+A 
Sbjct: 176 VEGVNKIKTGRLVTLSEQELVDCDTGDNQGCDGGLMDYAFQFIKRNGGITTESNYPYRAE 235

Query: 546 ESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV 603
           +    C   +     V +  Y  +P  +E  ++K VA + P++V + A+G    +YS GV
Sbjct: 236 QGR--CNKAKASSHDVTIDGYEDVPANDESALQKAVANQ-PVAVAVEASGQDFQFYSEGV 292

Query: 604 IDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                  C     +H +  VGYG    +DGT   YWIVKNSWG DWGE+
Sbjct: 293 FTGE---CGTDL-DHGVAAVGYG--ITRDGTK--YWIVKNSWGEDWGER 333



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 18/139 (12%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           RR   FV N     +  R         +NKF D++  + ++        T    +     
Sbjct: 69  RRFNVFVENARYIHEANRRGGRPFRLALNKFADMTTDEFRR--------TYAGSRARHHR 120

Query: 124 PFSSNQTDTEMRAFQFNSLRHG----DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 179
             S  +           S R+G    D+LP A DWR  G ++ +K+QG+C  CWAFS V 
Sbjct: 121 SLSGGRGGEGG------SFRYGGDDEDNLPPAVDWRERGAVTGIKDQGQCGSCWAFSTVA 174

Query: 180 VVEAMHAIQGNNLTELSVQ 198
            VE ++ I+   L  LS Q
Sbjct: 175 AVEGVNKIKTGRLVTLSEQ 193


>gi|18138384|ref|NP_542680.1| cathepsin [Helicoverpa zea SNPV]
 gi|209401110|ref|YP_002273979.1| viral cathepsin-like protein [Helicoverpa armigera NPV NNg1]
 gi|37077430|sp|Q8V5U0.1|CATV_NPVHZ RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|18028766|gb|AAL56202.1|AF334030_127 ORF57 [Helicoverpa zea SNPV]
 gi|209364362|dbj|BAG74621.1| viral cathepsin-like protein [Helicoverpa armigera NPV NNg1]
          Length = 367

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 159/316 (50%), Gaps = 51/316 (16%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSED-----------SGTAVFGVNKFFDL 245
           +Q ++K Y   ++   R+  F  N+ K      E+           S +A FGVNKF D 
Sbjct: 61  LQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDK 120

Query: 246 SESD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD--LPEAFDW 302
           +  + L   TG  L+              S + T  E R      ++   D  LP+ +DW
Sbjct: 121 TPDEVLHSNTGFFLN-------------LSQHYTLCENRI-----VKGAPDIRLPDYYDW 162

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGR 362
           R    ++ +K+QG C  CWAF A+G +E+ +AI+ N L +LS QQL+DCD  + GCNGG 
Sbjct: 163 RDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEVDLGCNGGL 222

Query: 363 MDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKW 422
           M  A Q ++  GGV ++  YPY+   SE+ C + +     VK+    +    +E ++K+ 
Sbjct: 223 MHLAFQELLLMGGVETEADYPYQG--SEQMCTL-DNRKIAVKLNSCFKYDIRDENKLKEL 279

Query: 423 VATRGPLSVGMNANGLFYYSGGVI------DLNQR--LYG----TSIPYWIVKNSWGSDW 470
           V T GP+++ ++A  +  Y  G++      DLN    L G     ++PYWI+KNSWG DW
Sbjct: 280 VYTTGPVAIAVDAMDIINYRRGILNQCHIYDLNHAVLLIGWGIENNVPYWIIKNSWGEDW 339

Query: 471 GE----KVEDKVGSSG 482
           GE    +V   V + G
Sbjct: 340 GENGFLRVRRNVNACG 355



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 96/164 (58%), Gaps = 12/164 (7%)

Query: 492 GVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
            +  +KL  L+ ++L+DCD  + GCNGG M  A Q ++  GGV ++  YPY+   SE+ C
Sbjct: 194 AIRHNKLIDLSEQQLLDCDEVDLGCNGGLMHLAFQELLLMGGVETEADYPYQG--SEQMC 251

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLC 611
            + +     VK+    +    +E ++K+ V T GP+++ ++A  +  Y  G+  LNQ  C
Sbjct: 252 TL-DNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGI--LNQ--C 306

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           +    NHA++++G+G E      ++PYWI+KNSWG DWGE   L
Sbjct: 307 HIYDLNHAVLLIGWGIE-----NNVPYWIIKNSWGEDWGENGFL 345



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 32/168 (19%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRED-----------SGTAVFEVNK 93
           F +F++ ++K Y   ++   R+  F  N+ K     RE+           S +A F VNK
Sbjct: 57  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 116

Query: 94  FFDLS-DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD--LPE 150
           F D + D  L   TG  L+              S + T  E R      ++   D  LP+
Sbjct: 117 FSDKTPDEVLHSNTGFFLN-------------LSQHYTLCENRI-----VKGAPDIRLPD 158

Query: 151 AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +DWR    ++ +K+QG C  CWAF A+G +E+ +AI+ N L +LS Q
Sbjct: 159 YYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQ 206


>gi|281207374|gb|EFA81557.1| hypothetical protein PPL_05546 [Polysphondylium pallidum PN500]
          Length = 341

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 145/299 (48%), Gaps = 36/299 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H+K Y+   +   R  +++ N+    DY  + +G A F  NKF DLS  + +        
Sbjct: 45  HEKSYADDSEYYLRLSHYIKNLRTVADYNKKHAGMAKFAPNKFSDLSIEEFRA------- 97

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
             L  +   L    S+ Q           +  +  ++P + DWR +G ++ VK Q +C  
Sbjct: 98  GYLNYVPNKLIKDRSTKQ-----------NFDYPANIPVSLDWRQKGFVTPVKNQEQCGS 146

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFSA   +E  + + GN+   +S QQ+VDCD  +GGC GG    A QY+   GG+ ++
Sbjct: 147 CWAFSAGEQIETAYIMAGNAAQNVSEQQIVDCDPYDGGCGGGDPMTAYQYVQSAGGITTN 206

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIP-YGEEEEMKKWVATRGPLSVGMNANGL 438
             YPY A++    C       F  ++  Y      G E E+K+ +A RGPLS+ ++A   
Sbjct: 207 TDYPYTATDGT--CYAQNTPKF-TQIASYGYASNKGNETELKQAIAARGPLSICVDAETW 263

Query: 439 FYYSGGVIDLN--------QRLYG------TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
             Y  GV++ N         ++ G      T+ PY+IV+NSWG+DWG +    VG   N
Sbjct: 264 MNYQSGVLNSNCPDELDHCVQIVGYDVEQSTNTPYYIVRNSWGTDWGMEGYILVGEGQN 322



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 24/186 (12%)

Query: 466 WGSDWGEKVEDKVGSSGNRTRDLELTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDAL 525
           W    GE++E     +GN  +++             + +++VDCD  +GGC GG    A 
Sbjct: 148 WAFSAGEQIETAYIMAGNAAQNV-------------SEQQIVDCDPYDGGCGGGDPMTAY 194

Query: 526 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP-YGEEEEMKKWVATR 584
           QY+   GG+ ++  YPY A++    C       F  ++  Y      G E E+K+ +A R
Sbjct: 195 QYVQSAGGITTNTDYPYTATDGT--CYAQNTPKF-TQIASYGYASNKGNETELKQAIAAR 251

Query: 585 GPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNS 644
           GPLS+ ++A     Y  GV++ N   C P   +H + IVGY  E+    T+ PY+IV+NS
Sbjct: 252 GPLSICVDAETWMNYQSGVLNSN---C-PDELDHCVQIVGYDVEQS---TNTPYYIVRNS 304

Query: 645 WGSDWG 650
           WG+DWG
Sbjct: 305 WGTDWG 310



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 18/155 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  +M  H+K Y+   +   R  +++ N+    DY ++ +G A F  NKF DLS  + + 
Sbjct: 38  FRQWMTKHEKSYADDSEYYLRLSHYIKNLRTVADYNKKHAGMAKFAPNKFSDLSIEEFRA 97

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                    L  +   L    S+ Q           +  +  ++P + DWR +G ++ VK
Sbjct: 98  -------GYLNYVPNKLIKDRSTKQ-----------NFDYPANIPVSLDWRQKGFVTPVK 139

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            Q +C  CWAFSA   +E  + + GN    +S Q 
Sbjct: 140 NQEQCGSCWAFSAGEQIETAYIMAGNAAQNVSEQQ 174


>gi|432114311|gb|ELK36239.1| Cathepsin S [Myotis davidii]
          Length = 340

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 116/196 (59%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LSVQ LVDC    
Sbjct: 124 LPDSMDWRDKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSVQNLVDCSTGK 183

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
            SN GCNGG M +A QYIIDN G+ S+ +YPYKA +   G    + +       +Y  +P
Sbjct: 184 YSNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD---GKCQYDVKNRAATCSKYVELP 240

Query: 413 YGEEEEMKKWVATRGPLSVGMNA---------NGLFYYSGGVIDLNQRL----YG--TSI 457
           +G EE +K+ VA +GP+SV ++A         +G++Y     +++N  +    YG     
Sbjct: 241 FGNEEALKEAVANKGPVSVAIDASHPSFFLYRSGVYYDKACTLNVNHGVLAVGYGNYNGK 300

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG  +GE+
Sbjct: 301 DYWLVKNSWGLHFGEQ 316



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC     SN GCNGG M +A QYIIDN G+ S+ +YPYKA +   G   
Sbjct: 167 KLVSLSVQNLVDCSTGKYSNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD---GKCQ 223

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y  +P+G EE +K+ VA +GP+SV ++A+    F Y  GV     + C
Sbjct: 224 YDVKNRAATCSKYVELPFGNEEALKEAVANKGPVSVAIDASHPSFFLYRSGVY--YDKAC 281

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH ++ VGYG    KD     YW+VKNSWG  +GE+
Sbjct: 282 TLNV-NHGVLAVGYGNYNGKD-----YWLVKNSWGLHFGEQ 316



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 35/51 (68%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LSVQ
Sbjct: 124 LPDSMDWRDKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSVQ 174


>gi|114559418|ref|XP_001171268.1| PREDICTED: cathepsin S isoform 3 [Pan troglodytes]
 gi|397492866|ref|XP_003817341.1| PREDICTED: cathepsin S isoform 1 [Pan paniscus]
 gi|410225070|gb|JAA09754.1| cathepsin S [Pan troglodytes]
 gi|410251608|gb|JAA13771.1| cathepsin S [Pan troglodytes]
 gi|410328325|gb|JAA33109.1| cathepsin S [Pan troglodytes]
 gi|410328327|gb|JAA33110.1| cathepsin S [Pan troglodytes]
          Length = 331

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 117/196 (59%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA++ +  C   + +       +Y+ +P
Sbjct: 175 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKATDQK--CQY-DSKYRAATCSKYTELP 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNA---------NGLFYYSGGVIDLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A         +G++Y      ++N  +    YG     
Sbjct: 232 YGREDVLKEAVANKGPVSVGVDALHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 291

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 292 EYWLVKNSWGHNFGEE 307



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 95/161 (59%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA++ +  C  
Sbjct: 158 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKATDQK--CQY 215

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 216 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDALHPSFFLYRSGV--YYEPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 273 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQ 165


>gi|2582055|gb|AAB82455.1| lymphopain [Mus musculus]
          Length = 371

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 142/307 (46%), Gaps = 53/307 (17%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDS 260
           ++ Y +  +  RR   F  N+ +A+  Q ED GTA FG   F DL+E +  QL G     
Sbjct: 48  NRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQLYG---QE 104

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR-AEGVISKVKEQGKCAC 319
              +  P++     SN                G+ +P   DWR A+ +IS VK QG C C
Sbjct: 105 RSPERTPNMTKKVESNTW--------------GESVPRTCDWRKAKNIISSVKNQGSCKC 150

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWA +A   ++A+  I+     ++SVQ+L+DC+    GCNGG + DA   +++N G+ S+
Sbjct: 151 CWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGNGCNGGFVWDAYLTVLNNSGLASE 210

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
           + YP++       CL  + +  KV   +   +    E+ +  ++A  GP++V +N   L 
Sbjct: 211 KDYPFQGDRKPHRCLAKKYK--KVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQ 268

Query: 440 YYSGGVIDL---------------------------------NQRLYGTSIPYWIVKNSW 466
           +Y  GVI                                   + R    S PYWI+KNSW
Sbjct: 269 HYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSW 328

Query: 467 GSDWGEK 473
           G+ WGEK
Sbjct: 329 GAHWGEK 335



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 92/164 (56%), Gaps = 14/164 (8%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           ++ ++L+DC+    GCNGG + DA   +++N G+ S++ YP++       CL  + +  K
Sbjct: 174 VSVQELLDCERCGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRCLAKKYK--K 231

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           V   +   +    E+ +  ++A  GP++V +N   L +Y  GVI      C+P+  +H++
Sbjct: 232 VAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSV 291

Query: 621 IIVGYGEEE------------KKDGTSIPYWIVKNSWGSDWGEK 652
           ++VG+G+++            +K   S PYWI+KNSWG+ WGEK
Sbjct: 292 LLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSWGAHWGEK 335



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F    ++ Y +  +  RR   F  N+ +A+  Q+ED GTA F    F DL++ +  Q
Sbjct: 40  FKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQ 99

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR-AEGVISKV 163
           L G        +  P++     SN                G+ +P   DWR A+ +IS V
Sbjct: 100 LYG---QERSPERTPNMTKKVESNTW--------------GESVPRTCDWRKAKNIISSV 142

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C CCWA +A   ++A+  I+     ++SVQ
Sbjct: 143 KNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQ 177


>gi|31981819|ref|NP_034115.2| cathepsin W preproprotein [Mus musculus]
 gi|341940311|sp|P56203.2|CATW_MOUSE RecName: Full=Cathepsin W; AltName: Full=Lymphopain; Flags:
           Precursor
 gi|26353368|dbj|BAC40314.1| unnamed protein product [Mus musculus]
 gi|44890089|gb|AAS48498.1| cathepsin W precursor [Mus musculus]
 gi|148701190|gb|EDL33137.1| cathepsin W, isoform CRA_b [Mus musculus]
 gi|162317774|gb|AAI56226.1| Cathepsin W [synthetic construct]
 gi|162318342|gb|AAI56999.1| Cathepsin W [synthetic construct]
          Length = 371

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 142/307 (46%), Gaps = 53/307 (17%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDS 260
           ++ Y +  +  RR   F  N+ +A+  Q ED GTA FG   F DL+E +  QL G     
Sbjct: 48  NRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQLYG---QE 104

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR-AEGVISKVKEQGKCAC 319
              +  P++     SN                G+ +P   DWR A+ +IS VK QG C C
Sbjct: 105 RSPERTPNMTKKVESNTW--------------GESVPRTCDWRKAKNIISSVKNQGSCKC 150

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWA +A   ++A+  I+     ++SVQ+L+DC+    GCNGG + DA   +++N G+ S+
Sbjct: 151 CWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGNGCNGGFVWDAYLTVLNNSGLASE 210

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
           + YP++       CL  + +  KV   +   +    E+ +  ++A  GP++V +N   L 
Sbjct: 211 KDYPFQGDRKPHRCLAKKYK--KVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQ 268

Query: 440 YYSGGVIDL---------------------------------NQRLYGTSIPYWIVKNSW 466
           +Y  GVI                                   + R    S PYWI+KNSW
Sbjct: 269 HYQKGVIKATPSSCDPRQVDHSVLLVGFGKEKEGMQTGTVLSHSRKRRHSSPYWILKNSW 328

Query: 467 GSDWGEK 473
           G+ WGEK
Sbjct: 329 GAHWGEK 335



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 92/164 (56%), Gaps = 14/164 (8%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           ++ ++L+DC+    GCNGG + DA   +++N G+ S++ YP++       CL  + +  K
Sbjct: 174 VSVQELLDCERCGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRCLAKKYK--K 231

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           V   +   +    E+ +  ++A  GP++V +N   L +Y  GVI      C+P+  +H++
Sbjct: 232 VAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSV 291

Query: 621 IIVGYGEEE------------KKDGTSIPYWIVKNSWGSDWGEK 652
           ++VG+G+E+            +K   S PYWI+KNSWG+ WGEK
Sbjct: 292 LLVGFGKEKEGMQTGTVLSHSRKRRHSSPYWILKNSWGAHWGEK 335



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F    ++ Y +  +  RR   F  N+ +A+  Q+ED GTA F    F DL++ +  Q
Sbjct: 40  FKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQ 99

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR-AEGVISKV 163
           L G        +  P++     SN                G+ +P   DWR A+ +IS V
Sbjct: 100 LYG---QERSPERTPNMTKKVESNTW--------------GESVPRTCDWRKAKNIISSV 142

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C CCWA +A   ++A+  I+     ++SVQ
Sbjct: 143 KNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQ 177


>gi|224162986|ref|XP_002338508.1| predicted protein [Populus trichocarpa]
 gi|222872535|gb|EEF09666.1| predicted protein [Populus trichocarpa]
          Length = 306

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 146/293 (49%), Gaps = 38/293 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + +VY    +   R+  F  NV + + + S+   +   GVN+F DL+  + +     
Sbjct: 9   MTQYGRVYKDDNERATRYSIFKENVARIDAFNSQTGKSYKLGVNQFADLTNEEFK----- 63

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                      + +  F  +    +   F++ ++     +P   DWR EG ++ VK+QG+
Sbjct: 64  -----------ASRNRFKGHMCSPQAGPFRYENVSA---VPSTVDWRKEGAVTPVKDQGQ 109

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV  +E ++ +    L  LS Q++VDCD    + GCNGG MDDA ++I  N 
Sbjct: 110 CGCCWAFSAVAAMEGINKLTTGKLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQNK 169

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPYK ++    C   +      K+  +  +P   E  + K VA + P+SV ++
Sbjct: 170 GLTTEANYPYKGTDGT--CNTKKSAIHAAKITGFEDVPANSEAALMKAVAKQ-PVSVAID 226

Query: 435 ANG--LFYYSGGVI--DLNQRL--------YGTS--IPYWIVKNSWGSDWGEK 473
           A G    +YS G+     + +L        YG S    YW+VKNSWG+ WGE+
Sbjct: 227 AGGSDFQFYSSGIFTGSCDTQLDHGVTAVGYGVSDGSKYWLVKNSWGAQWGEE 279



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 16/160 (10%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ +++VDCD    + GCNGG MDDA ++I  N G+ ++  YPYK ++    C   
Sbjct: 132 KLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEANYPYKGTDGT--CNTK 189

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +      K+  +  +P   E  + K VA + P+SV ++A G    +YS G+   +   C+
Sbjct: 190 KSAIHAAKITGFEDVPANSEAALMKAVAKQ-PVSVAIDAGGSDFQFYSSGIFTGS---CD 245

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DG+   YW+VKNSWG+ WGE+
Sbjct: 246 TQL-DHGVTAVGYGVS---DGSK--YWLVKNSWGAQWGEE 279



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + +VY    +   R+  F  NV + + +  +   +    VN+F DL++ + +
Sbjct: 4   RHEQWMTQYGRVYKDDNERATRYSIFKENVARIDAFNSQTGKSYKLGVNQFADLTNEEFK 63

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                           + +  F  +    +   F++ ++     +P   DWR EG ++ V
Sbjct: 64  ----------------ASRNRFKGHMCSPQAGPFRYENVSA---VPSTVDWRKEGAVTPV 104

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV  +E ++ +    L  LS Q
Sbjct: 105 KDQGQCGCCWAFSAVAAMEGINKLTTGKLISLSEQ 139


>gi|146215988|gb|ABQ10196.1| actinidin Act3a [Actinidia eriantha]
          Length = 380

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 162/312 (51%), Gaps = 43/312 (13%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  +  + K Y+S+ +   R E F  N+   +++ ++ + +   G+N+F DL++ + +
Sbjct: 41  LYESWLVKYGKSYNSLGEREMRIEIFKENLRFIDEHNADPNRSYTVGLNQFADLTDEEYR 100

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
             T L   S+L+    +   P                  + G+ LP+  DWR  G +  V
Sbjct: 101 S-TYLGFKSSLKSKVSNRYMP------------------QVGEVLPDYVDWRTTGAVVDV 141

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQY 369
           K QG C+ CWAF+ +  VE+++ I    L  LS Q+LVDC+ +  N GC GG MDDA ++
Sbjct: 142 KNQGLCSSCWAFATIATVESINQIITGDLISLSEQELVDCNRTPINEGCKGGFMDDAYEF 201

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           II+NGG+ +++ YPY   + +  C   ++    V +  Y ++P  +E  MK+ VA + P+
Sbjct: 202 IINNGGINTEENYPYIGQDDQ--CDEPKKNQNYVTIDSYEQVPPNDELAMKRAVAYQ-PV 258

Query: 430 SVGMNAN--GLFYYSGGVI-------DLNQRL----YGT--SIPYWIVKNSWGSDWGE-- 472
           SV ++A   G  +Y  G+         LN  +    YGT   I YWIVKNS+G+ WGE  
Sbjct: 259 SVAIDAYCLGFRFYQSGIFTGGSCGTTLNHAVTIIGYGTENGIDYWIVKNSYGTQWGESG 318

Query: 473 --KVEDKVGSSG 482
             KV+  VG  G
Sbjct: 319 YGKVQRNVGGEG 330



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 15/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           ++   L  L+ ++LVDC+ +  N GC GG MDDA ++II+NGG+ +++ YPY   + +  
Sbjct: 165 IITGDLISLSEQELVDCNRTPINEGCKGGFMDDAYEFIINNGGINTEENYPYIGQDDQ-- 222

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQ 608
           C   ++    V +  Y ++P  +E  MK+ VA + P+SV ++A   G  +Y  G+     
Sbjct: 223 CDEPKKNQNYVTIDSYEQVPPNDELAMKRAVAYQ-PVSVAIDAYCLGFRFYQSGIFTGGS 281

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C     NHA+ I+GYG E   D     YWIVKNS+G+ WGE
Sbjct: 282 --CG-TTLNHAVTIIGYGTENGID-----YWIVKNSYGTQWGE 316



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNV 73
           L +  TF+I    +++ I   R   +  +  + +++  + K Y+S+ +   R E F  N+
Sbjct: 12  LLFFSTFLIFSFAIDAKISPLRTN-DEVMALYESWLVKYGKSYNSLGEREMRIEIFKENL 70

Query: 74  EKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTE 133
              +++  + + +    +N+F DL+D + +  T L   S+L+    +   P         
Sbjct: 71  RFIDEHNADPNRSYTVGLNQFADLTDEEYRS-TYLGFKSSLKSKVSNRYMP--------- 120

Query: 134 MRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLT 193
                    + G+ LP+  DWR  G +  VK QG C+ CWAF+ +  VE+++ I   +L 
Sbjct: 121 ---------QVGEVLPDYVDWRTTGAVVDVKNQGLCSSCWAFATIATVESINQIITGDLI 171

Query: 194 ELSVQ 198
            LS Q
Sbjct: 172 SLSEQ 176


>gi|222629675|gb|EEE61807.1| hypothetical protein OsJ_16426 [Oryza sativa Japonica Group]
          Length = 459

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 152/291 (52%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H K Y++V +  RR+  F  N+   +++ +  D+G   F  G+N+F DL+  + +  T L
Sbjct: 48  HGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRD-TYL 106

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L +     +P  +   S      +  A           LPE+ DWR +G ++++K+QG 
Sbjct: 107 GLRN-----KPRRERKVSDRYLAADNEA-----------LPESVDWRTKGAVAEIKDQGG 150

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFSA+  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A  +II+NGG
Sbjct: 151 CGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGG 210

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPYK  + ER C V  +    V +  Y  +    E  ++K VA + P+SV + A
Sbjct: 211 IDTEDDYPYKGKD-ER-CDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQ-PVSVAIEA 267

Query: 436 NGLFY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            G  +  YS G+        L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 268 GGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGE 318



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A  +II+NGG+ ++  YPYK  + ER C
Sbjct: 169 IVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKD-ER-C 226

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
            V  +    V +  Y  +    E  ++K VA + P+SV + A G  +  YS G+      
Sbjct: 227 DVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQ-PVSVAIEAGGRAFQLYSSGIFTGK-- 283

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YWIV+NSWG  WGE
Sbjct: 284 -CG-TALDHGVAAVGYGTENGKD-----YWIVRNSWGKSWGE 318



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 47/264 (17%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +  +H K Y++V +  RR+  F  N+   +++    D+G   F +  N+F DL++ +
Sbjct: 41  YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEE 100

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +  T L L +     +P  +   S      +  A           LPE+ DWR +G ++
Sbjct: 101 YRD-TYLGLRN-----KPRRERKVSDRYLAADNEA-----------LPESVDWRTKGAVA 143

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED-----LLRRHEN 216
           ++K+QG C  CWAFSA+  VE ++ I   +L  LS Q      +S  +     L+    +
Sbjct: 144 EIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFD 203

Query: 217 FVTN---VEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQP----SL 269
           F+ N   ++  +DY  +       G ++  D++  + + +T   +DS  ED+ P    SL
Sbjct: 204 FIINNGGIDTEDDYPYK-------GKDERCDVNRKNAKVVT---IDS-YEDVTPNSETSL 252

Query: 270 QAPFSSNQTDTEM----RAFQFNS 289
           Q   ++      +    RAFQ  S
Sbjct: 253 QKAVANQPVSVAIEAGGRAFQLYS 276


>gi|357166359|ref|XP_003580684.1| PREDICTED: oryzain alpha chain-like [Brachypodium distachyon]
          Length = 456

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 151/289 (52%), Gaps = 38/289 (13%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGLNL 258
           + Y+++ +  RR E F  N+   + + +  D+G   F  G+N+F DL+  + +  T L +
Sbjct: 51  RTYNAIGEEERRFEVFRDNLRYVDQHNAAADAGLHSFRLGLNRFADLTNEEYRD-TYLGV 109

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
            +     +P  +   S      +            ++LPE+ DWR +G ++KVK+QG C 
Sbjct: 110 RT-----KPVRERRLSGRYQAAD-----------NEELPESVDWREKGAVAKVKDQGGCG 153

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVV 377
            CWAFSA+  VE ++ I    +  LS Q+LVDCD S N GCNGG MD A ++II+NGG+ 
Sbjct: 154 SCWAFSAIAAVEGINQIVTGDMIALSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGID 213

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           S++ YPYK  E +  C   ++    V +  Y  +P   E  +KK VA + P+SV + A G
Sbjct: 214 SEEDYPYK--ERDNRCDANKKNAKVVTIDGYEDVPVNSELSLKKAVANQ-PISVAIEAGG 270

Query: 438 LFY--YSGGVID----------LNQRLYGT--SIPYWIVKNSWGSDWGE 472
             +  Y  G+            +    YG+     YWIVKNSWG+ WGE
Sbjct: 271 RAFQLYKSGIFTGRCGTALDHGVTAVGYGSENGKDYWIVKNSWGTVWGE 319



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 91/162 (56%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   +  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ S++ YPYK  E +  C
Sbjct: 170 IVTGDMIALSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDSEEDYPYK--ERDNRC 227

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
              ++    V +  Y  +P   E  +KK VA + P+SV + A G  +  Y  G+      
Sbjct: 228 DANKKNAKVVTIDGYEDVPVNSELSLKKAVANQ-PISVAIEAGGRAFQLYKSGIF---TG 283

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YWIVKNSWG+ WGE
Sbjct: 284 RCG-TALDHGVTAVGYGSENGKD-----YWIVKNSWGTVWGE 319



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 20/157 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           ++ +M ++ + Y+++ +  RR E F  N+   + +    D+G   F +  N+F DL++ +
Sbjct: 42  YVEWMAENGRTYNAIGEEERRFEVFRDNLRYVDQHNAAADAGLHSFRLGLNRFADLTNEE 101

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +  T L + +     +P  +   S      +            ++LPE+ DWR +G ++
Sbjct: 102 YRD-TYLGVRT-----KPVRERRLSGRYQAAD-----------NEELPESVDWREKGAVA 144

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           KVK+QG C  CWAFSA+  VE ++ I   ++  LS Q
Sbjct: 145 KVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIALSEQ 181


>gi|33945878|emb|CAE45589.1| papain-like cysteine proteinase-like protein 2 [Lotus japonicus]
          Length = 361

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 149/320 (46%), Gaps = 69/320 (21%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L  +HH         KVY++ E+   R   F +N+ +A  +Q  D  +AV GV +F DL+
Sbjct: 39  LGAEHHFLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDP-SAVHGVTRFSDLT 97

Query: 247 ESDLQQ----LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
             + +     L G+ L S   D  P L                        D+LP+ FDW
Sbjct: 98  PMEFRHSVLGLRGVGLPSD-ADSAPILPT----------------------DNLPKDFDW 134

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--------- 353
           R  G ++ VK QG C  CW+FSA G +E  H +    L  LS QQLVDCD          
Sbjct: 135 REHGAVTPVKNQGSCGSCWSFSATGALEGAHFLSTGKLVSLSEQQLVDCDHEQCDPEEAG 194

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GC GG M+ A +YI++NGGV+ ++ YPY  +    G    ++      V  +S + 
Sbjct: 195 SCDSGCKGGLMNSAFEYILNNGGVMREEDYPYSGTAG--GTCKFDQTKIAASVANFSVVS 252

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI-------DLNQRL----YGTSI---- 457
             +E+++   +   GPL+V +NA  +  Y GGV         LN  +    YG+      
Sbjct: 253 R-DEDQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYAPI 311

Query: 458 -----PYWIVKNSWGSDWGE 472
                PYWI+KNSWG +WGE
Sbjct: 312 RMKQKPYWIIKNSWGENWGE 331



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 109/220 (49%), Gaps = 34/220 (15%)

Query: 447 DLNQRLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS-KLSRLAT 503
           D + R +G   P   VKN  S GS W          S + T  LE    L + KL  L+ 
Sbjct: 131 DFDWREHGAVTP---VKNQGSCGSCW----------SFSATGALEGAHFLSTGKLVSLSE 177

Query: 504 EKLVDCDM----------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           ++LVDCD            + GC GG M+ A +YI++NGGV+ ++ YPY  +    G   
Sbjct: 178 QQLVDCDHEQCDPEEAGSCDSGCKGGLMNSAFEYILNNGGVMREEDYPYSGTAG--GTCK 235

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
            ++      V  +S +   +E+++   +   GPL+V +NA  +  Y GGV      +C+ 
Sbjct: 236 FDQTKIAASVANFSVVSR-DEDQIAANLVKNGPLAVAINAVYMQTYVGGVS--CPYVCSK 292

Query: 614 KAQNHALIIVGYGEEEKKD--GTSIPYWIVKNSWGSDWGE 651
           K  NH +++VGYG E          PYWI+KNSWG +WGE
Sbjct: 293 KL-NHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGENWGE 331



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 72/159 (45%), Gaps = 28/159 (17%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            FL F R   KVY++ E+   R   F +N+ +A  +Q  D  +AV  V +F DL+  + +
Sbjct: 44  HFLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDP-SAVHGVTRFSDLTPMEFR 102

Query: 104 Q----LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
                L G+ L S   D  P L                        D+LP+ FDWR  G 
Sbjct: 103 HSVLGLRGVGLPSD-ADSAPILPT----------------------DNLPKDFDWREHGA 139

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ VK QG C  CW+FSA G +E  H +    L  LS Q
Sbjct: 140 VTPVKNQGSCGSCWSFSATGALEGAHFLSTGKLVSLSEQ 178


>gi|343470378|emb|CCD16903.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 159/318 (50%), Gaps = 35/318 (11%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  ++E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRMFKQSMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +  T LN     +    +L+ P       T         
Sbjct: 77  AANPYATFGVTQFSDMSPEEFRA-TYLN---GAKYYAAALKRPRKVVNVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  P A DWR +G ++ VK+QGKC  CWAFSA+G +E    + G+ LT LS Q LV
Sbjct: 124 ----GKAPPAIDWRKKGAVTPVKDQGKCGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD  + GC GG +D AL++I+  + G V ++++YPY +++ +        +    K+  
Sbjct: 180 SCDNMDYGCRGGFLDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPCNKSGKVVGAKISG 239

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRLY------GT 455
              +P  +E  + +W+A  GP+++ ++A+    Y+GGV+       LN  +        +
Sbjct: 240 LINLP-KDENAIAEWLAKNGPIAIAVDASSFLDYTGGVLTSCSSDALNHGVLLVGYDDSS 298

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSWG  WGE+
Sbjct: 299 KPPYWIIKNSWGKKWGEE 316



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 91/158 (57%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVG 554
           +L+ L+ + LV CD  + GC GG +D AL++I+  + G V ++++YPY +++ +      
Sbjct: 169 ELTSLSEQMLVSCDNMDYGCRGGFLDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPCNK 228

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
             +    K+     +P  +E  + +W+A  GP+++ ++A+    Y+GGV+      C+  
Sbjct: 229 SGKVVGAKISGLINLP-KDENAIAEWLAKNGPIAIAVDASSFLDYTGGVLTS----CSSD 283

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A NH +++VGY +  K      PYWI+KNSWG  WGE+
Sbjct: 284 ALNHGVLLVGYDDSSKP-----PYWIIKNSWGKKWGEE 316



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  ++E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKE-EAAANPYATFGVTQFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             T LN     +    +L+ P       T                P A DWR +G ++ V
Sbjct: 99  A-TYLN---GAKYYAAALKRPRKVVNVST-------------GKAPPAIDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QGKC  CWAFSA+G +E    + G+ LT LS Q
Sbjct: 142 KDQGKCGSCWAFSAIGNIEGQWKVAGHELTSLSEQ 176


>gi|242074728|ref|XP_002447300.1| hypothetical protein SORBIDRAFT_06g032360 [Sorghum bicolor]
 gi|241938483|gb|EES11628.1| hypothetical protein SORBIDRAFT_06g032360 [Sorghum bicolor]
          Length = 471

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 162/338 (47%), Gaps = 53/338 (15%)

Query: 177 AVGVVEAMHAIQGNNLTELSVQHHDKVYS-SVEDLLRRHENFVTNVEKAEDYQSEDSGTA 235
           AVG   A    Q   + E  +  H K  S ++ +  RR   F  N+   + + +      
Sbjct: 36  AVGGGMARTEAQVRAMYEQWMARHGKAASNALGEHDRRFRAFWDNLRFVDAHNARAGARG 95

Query: 236 V-FGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG- 293
              G+N+F DL+ ++ +                   A  S+   +    A      RH  
Sbjct: 96  YRLGINRFADLTNAEFRA------------------AYLSAGARNGTATAATGERYRHDG 137

Query: 294 -DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
            + LPE  DWR +G ++ VK QG+C  CWAFSAVG VE ++ I    L  LS Q+LVDC 
Sbjct: 138 VEALPEFVDWRQKGAVAPVKNQGQCGSCWAFSAVGAVEGINQIVTGELVTLSEQELVDCS 197

Query: 353 MS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 410
            +  NGGC+GG MDDA  +I+ NGG+ +D+ YPY A + +  C V +     V +  +  
Sbjct: 198 KNGQNGGCDGGMMDDAFAFIVGNGGIDTDKDYPYTARDGK--CDVAKRSRHVVSIDGFEG 255

Query: 411 IPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSG------------GVIDLNQRLYGT 455
           +P  +E+ ++K VA + P++V + A G     Y SG            GV+ +    YGT
Sbjct: 256 VPRNDEKSLQKAVAHQ-PVAVAIEAGGREFQLYQSGVFTGRCGTSLDHGVVAVG---YGT 311

Query: 456 SI----PYWIVKNSWGSDWGE----KVEDKVGSSGNRT 485
                  YW+V+NSWG+DWGE    ++E  VG+   + 
Sbjct: 312 EADGGRDYWLVRNSWGADWGEGGYIRMERNVGARAGKC 349



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           ++  +L  L+ ++LVDC  +  NGGC+GG MDDA  +I+ NGG+ +D+ YPY A + +  
Sbjct: 180 IVTGELVTLSEQELVDCSKNGQNGGCDGGMMDDAFAFIVGNGGIDTDKDYPYTARDGK-- 237

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQ 608
           C V +     V +  +  +P  +E+ ++K VA + P++V + A G  +  Y  GV     
Sbjct: 238 CDVAKRSRHVVSIDGFEGVPRNDEKSLQKAVAHQ-PVAVAIEAGGREFQLYQSGVFTGR- 295

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C   + +H ++ VGYG E   DG    YW+V+NSWG+DWGE
Sbjct: 296 --CG-TSLDHGVVAVGYGTE--ADGGR-DYWLVRNSWGADWGE 332



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 33/156 (21%)

Query: 47  NFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFE--VNKFFDLSDSDLQQ 104
           N + +HD+ + +  D LR    FV       D     +G   +   +N+F DL++++ + 
Sbjct: 65  NALGEHDRRFRAFWDNLR----FV-------DAHNARAGARGYRLGINRFADLTNAEFRA 113

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG--DDLPEAFDWRAEGVISK 162
                             A  S+   +    A      RH   + LPE  DWR +G ++ 
Sbjct: 114 ------------------AYLSAGARNGTATAATGERYRHDGVEALPEFVDWRQKGAVAP 155

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG+C  CWAFSAVG VE ++ I    L  LS Q
Sbjct: 156 VKNQGQCGSCWAFSAVGAVEGINQIVTGELVTLSEQ 191


>gi|297826875|ref|XP_002881320.1| hypothetical protein ARALYDRAFT_321132 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327159|gb|EFH57579.1| hypothetical protein ARALYDRAFT_321132 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 341

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 145/289 (50%), Gaps = 39/289 (13%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGLNLDS 260
           +VY    +   R + F  N++  E++  + + +   GVN+F D +  +   + TGL    
Sbjct: 48  RVYRDELEKQMRRDVFKKNLKFIENFNKKGNKSYKLGVNEFADWTNEEFLAIHTGLK--- 104

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACC 320
                        SS   D  + +  +N     D +  + DWRAEG ++ VK QG+C CC
Sbjct: 105 -----------GLSSKVVDETISSRSWNI---SDMVGVSKDWRAEGAVTPVKYQGQCGCC 150

Query: 321 WAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSD 379
           WAFSAV  VE +  I G +L  LS QQL+DCD   + GC+GG M DA  YII N G+ S+
Sbjct: 151 WAFSAVAAVEGVTKIAGGNLVSLSEQQLLDCDREYDRGCDGGIMSDAFNYIIQNRGIASE 210

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--G 437
             Y Y+ S+    C          ++  +  +P   E+ + + V +R P+SV M+AN  G
Sbjct: 211 NDYSYQGSDGR--CRSSARPA--ARISGFQTVPSNNEQALLEAV-SRQPVSVSMDANGDG 265

Query: 438 LFYYSGGVID------LNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
             +YSGGV D       N  +    YGTS     YW+ KNSWG  WGEK
Sbjct: 266 FMHYSGGVYDGPCGTSSNHAVTFVGYGTSQDGTKYWLAKNSWGETWGEK 314



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 90/166 (54%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +T +    L  L+ ++L+DCD   + GC+GG M DA  YII N G+ S+  Y Y+ S+  
Sbjct: 162 VTKIAGGNLVSLSEQQLLDCDREYDRGCDGGIMSDAFNYIIQNRGIASENDYSYQGSDGR 221

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDL 606
             C          ++  +  +P   E+ + + V +R P+SV M+AN  G  +YSGGV D 
Sbjct: 222 --CRSSARPA--ARISGFQTVPSNNEQALLEAV-SRQPVSVSMDANGDGFMHYSGGVYD- 275

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C   + NHA+  VGYG  +  DGT   YW+ KNSWG  WGEK
Sbjct: 276 --GPCG-TSSNHAVTFVGYGTSQ--DGTK--YWLAKNSWGETWGEK 314



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 22/182 (12%)

Query: 19  TFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAED 78
           TF I  A   +  F       S + +   +M    +VY    +   R + F  N++  E+
Sbjct: 17  TFSISQATSRTVTFHE----PSSLEKHEQWMARFSRVYRDELEKQMRRDVFKKNLKFIEN 72

Query: 79  YQREDSGTAVFEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAF 137
           + ++ + +    VN+F D ++ +   + TGL                 SS   D  + + 
Sbjct: 73  FNKKGNKSYKLGVNEFADWTNEEFLAIHTGLK--------------GLSSKVVDETISSR 118

Query: 138 QFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSV 197
            +N     D +  + DWRAEG ++ VK QG+C CCWAFSAV  VE +  I G NL  LS 
Sbjct: 119 SWNI---SDMVGVSKDWRAEGAVTPVKYQGQCGCCWAFSAVAAVEGVTKIAGGNLVSLSE 175

Query: 198 QH 199
           Q 
Sbjct: 176 QQ 177


>gi|226506492|ref|NP_001140873.1| uncharacterized protein LOC100272949 precursor [Zea mays]
 gi|194701540|gb|ACF84854.1| unknown [Zea mays]
          Length = 379

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 145/295 (49%), Gaps = 35/295 (11%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +V+    +  RR   F  NV     +           +N+F D+   + +      
Sbjct: 48  QTHHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPYRLRLNRFGDMGREEFRSTFA-- 105

Query: 258 LDSTLEDIQ----PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
            DS + D++    P+ +A          +  F ++S     D P + DWR EG ++ VK 
Sbjct: 106 -DSRINDLRRQDSPAARA--------GAVPGFMYDS---AADPPRSVDWRQEGAVTGVKV 153

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN 373
           QG C  CWAFS V  VE ++AI+  SL  LS Q+L+DCD    GC GG M++A ++I   
Sbjct: 154 QGHCGSCWAFSTVVAVEGINAIRTGSLASLSEQELIDCDTDENGCQGGLMENAFEFIKSF 213

Query: 374 GGVVSDQAYPYKASESE-RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           GG+ ++ AYPY+AS     G       G  V +  +  +P G E+ + K VA + P+SV 
Sbjct: 214 GGITTEAAYPYRASNGTCDGDRARRGGGVVVVIDGHQMVPAGSEDALAKAVAHQ-PVSVA 272

Query: 433 MNANG--LFYYSGGVI------DLNQRL----YGT---SIPYWIVKNSWGSDWGE 472
           ++A G    +YS GV       DL+  +    YG      PYWIVKNSWG+ WGE
Sbjct: 273 VDAGGQAFQFYSEGVFTGDCGTDLDHGVAAVGYGVGDDGTPYWIVKNSWGTSWGE 327



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 16/167 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE- 548
           +  +    L+ L+ ++L+DCD    GC GG M++A ++I   GG+ ++ AYPY+AS    
Sbjct: 172 INAIRTGSLASLSEQELIDCDTDENGCQGGLMENAFEFIKSFGGITTEAAYPYRASNGTC 231

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI-- 604
            G       G  V +  +  +P G E+ + K VA + P+SV ++A G    +YS GV   
Sbjct: 232 DGDRARRGGGVVVVIDGHQMVPAGSEDALAKAVAHQ-PVSVAVDAGGQAFQFYSEGVFTG 290

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           D    L      +H +  VGYG  +  DGT  PYWIVKNSWG+ WGE
Sbjct: 291 DCGTDL------DHGVAAVGYGVGD--DGT--PYWIVKNSWGTSWGE 327



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 18/151 (11%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLD 111
           H +V+    +  RR   F  NV     + +         +N+F D+   + +       D
Sbjct: 50  HHRVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPYRLRLNRFGDMGREEFRSTFA---D 106

Query: 112 STLEDIQ----PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           S + D++    P+ +A          +  F ++S     D P + DWR EG ++ VK QG
Sbjct: 107 SRINDLRRQDSPAARA--------GAVPGFMYDS---AADPPRSVDWRQEGAVTGVKVQG 155

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFS V  VE ++AI+  +L  LS Q
Sbjct: 156 HCGSCWAFSTVVAVEGINAIRTGSLASLSEQ 186


>gi|116309178|emb|CAH66275.1| OSIGBa0147O06.5 [Oryza sativa Indica Group]
          Length = 339

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 154/313 (49%), Gaps = 51/313 (16%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF--GVNKFFDLSESDLQQLT 254
           +  + ++Y    +  RR E F  NV   E +   ++G   F  GVN+F DL+  + +   
Sbjct: 41  MAQYGRMYKDDAEKARRFEVFKANVAFIESF---NAGNHKFWLGVNQFADLTNDEFRST- 96

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
                 T +   PS      + +  T  R    N     D LP   DWR +GV++ +K+Q
Sbjct: 97  -----KTNKGFIPS------TTRVPTGFRYENVNI----DALPATMDWRTKGVVTPIKDQ 141

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIID 372
           G+C CCWAFSAV  +E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II 
Sbjct: 142 GQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIK 201

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ ++  YPY A++ +   +          +K Y  +P   E  + K VA + P+SV 
Sbjct: 202 NGGLTTESNYPYAAADDKCKSVSNS----VASIKGYEDVPANNEAALMKAVANQ-PVSVA 256

Query: 433 MNANGLF--YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK---- 473
           ++   +   +Y GGV+      DL+  +    YG +     YW++KNSWG+ WGE     
Sbjct: 257 VDGGDMTFQFYKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYWLLKNSWGTTWGENGFLR 316

Query: 474 ----VEDKVGSSG 482
               + DK G  G
Sbjct: 317 MEKDISDKRGMCG 329



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+ ++  YPY A++ +   +  
Sbjct: 166 KLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYAAADDKCKSVSN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P   E  + K VA + P+SV ++   +   +Y GGV+  +   C 
Sbjct: 226 S----VASIKGYEDVPANNEAALMKAVANQ-PVSVAVDGGDMTFQFYKGGVMTGS---CG 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H ++ +GYG+    DGT   YW++KNSWG+ WGE   L
Sbjct: 278 TD-LDHGIVAIGYGKAS--DGTK--YWLLKNSWGTTWGENGFL 315



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 21/159 (13%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF--EVNKFFDLSD 99
             R   +M  + ++Y    +  RR E F  NV   E +   ++G   F   VN+F DL++
Sbjct: 34  AARHERWMAQYGRMYKDDAEKARRFEVFKANVAFIESF---NAGNHKFWLGVNQFADLTN 90

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
            + +         T +   PS      + +  T  R    N     D LP   DWR +GV
Sbjct: 91  DEFRST------KTNKGFIPS------TTRVPTGFRYENVNI----DALPATMDWRTKGV 134

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ +K+QG+C CCWAFSAV  +E +  +    L  LS Q
Sbjct: 135 VTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQ 173


>gi|224081320|ref|XP_002306369.1| predicted protein [Populus trichocarpa]
 gi|222855818|gb|EEE93365.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 144/298 (48%), Gaps = 48/298 (16%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + +VY    +   R+  F  NV + + + S+   +   GVN+F DLS  + +     
Sbjct: 43  MAQYGRVYKDDAEKETRYNIFKENVARIDAFNSQTGKSYKLGVNQFADLSNEEFKA---- 98

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQ 314
                            S N+    M + Q    R+ +   +P   DWR +G ++ VK+Q
Sbjct: 99  -----------------SRNRFKGHMCSPQAGPFRYENVSAVPATMDWRKKGAVTPVKDQ 141

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIID 372
           G+C CCWAFSAV  +E ++ +    L  LS Q++VDCD    + GCNGG MDDA ++I  
Sbjct: 142 GQCGCCWAFSAVAAMEGINQLTTGKLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQ 201

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           N G+ ++  YPY  ++    C   +E     K+  +  +P   E  + K VA + P+SV 
Sbjct: 202 NKGLTTEANYPYTGTDGT--CNTQKEATHAAKITGFEDVPANSEAALMKAVAKQ-PVSVA 258

Query: 433 MNANGL---FYYSG------------GVIDLNQRLYGTS--IPYWIVKNSWGSDWGEK 473
           ++A G    FY SG            GV  +    YG S    YW+VKNSWG+ WGE+
Sbjct: 259 IDAGGFEFQFYSSGIFTGSCGTQLDHGVTAVG---YGISDGTKYWLVKNSWGAQWGEE 313



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 16/160 (10%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ +++VDCD    + GCNGG MDDA ++I  N G+ ++  YPY  ++    C   
Sbjct: 166 KLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEANYPYTGTDGT--CNTQ 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +E     K+  +  +P   E  + K VA + P+SV ++A G    +YS G+   +   C 
Sbjct: 224 KEATHAAKITGFEDVPANSEAALMKAVAKQ-PVSVAIDAGGFEFQFYSSGIFTGS---CG 279

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG     DGT   YW+VKNSWG+ WGE+
Sbjct: 280 TQL-DHGVTAVGYG---ISDGTK--YWLVKNSWGAQWGEE 313



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 23/157 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + +VY    +   R+  F  NV + + +  +   +    VN+F DLS+ + +
Sbjct: 38  RHEQWMAQYGRVYKDDAEKETRYNIFKENVARIDAFNSQTGKSYKLGVNQFADLSNEEFK 97

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVIS 161
                                 S N+    M + Q    R+ +   +P   DWR +G ++
Sbjct: 98  A---------------------SRNRFKGHMCSPQAGPFRYENVSAVPATMDWRKKGAVT 136

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG+C CCWAFSAV  +E ++ +    L  LS Q
Sbjct: 137 PVKDQGQCGCCWAFSAVAAMEGINQLTTGKLISLSEQ 173


>gi|403302730|ref|XP_003942006.1| PREDICTED: cathepsin S isoform 1 [Saimiri boliviensis boliviensis]
          Length = 339

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 117/195 (60%), Gaps = 20/195 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--M 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 124 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKY 183

Query: 354 SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY 413
            N GCNGG M +A QYIIDN G+ S+ +YPYKA++ +  C   + +       +Y+ +PY
Sbjct: 184 GNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQK--CQY-DSKYRAATCSKYTELPY 240

Query: 414 GEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI---DLNQRL--------YG--TSIP 458
           G E+ +K+ VA +GP+ VG++A+    F Y  GV       Q++        YG      
Sbjct: 241 GREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDLNGKE 300

Query: 459 YWIVKNSWGSDWGEK 473
           YW+VKNSWGS++GE+
Sbjct: 301 YWLVKNSWGSNFGEQ 315



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 97/160 (60%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG M +A QYIIDN G+ S+ +YPYKA++ +  C   
Sbjct: 167 KLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQK--CQY- 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCN 612
           + +       +Y+ +PYG E+ +K+ VA +GP+ VG++A+    F Y  GV       C 
Sbjct: 224 DSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGV--YYDPACT 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            K  NH ++++GYG+   K+     YW+VKNSWGS++GE+
Sbjct: 282 QKV-NHGVLVIGYGDLNGKE-----YWLVKNSWGSNFGEQ 315



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 124 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 175


>gi|62510453|sp|Q8HY82.1|CATS_SAIBB RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497536|gb|AAO13008.1| cathepsin S preproprotein [Saimiri boliviensis]
          Length = 330

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 117/195 (60%), Gaps = 20/195 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--M 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKY 174

Query: 354 SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY 413
            N GCNGG M +A QYIIDN G+ S+ +YPYKA++ +  C   + +       +Y+ +PY
Sbjct: 175 GNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQK--CQY-DSKYRAATCSKYTELPY 231

Query: 414 GEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI---DLNQRL--------YG--TSIP 458
           G E+ +K+ VA +GP+ VG++A+    F Y  GV       Q++        YG      
Sbjct: 232 GREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDLNGKE 291

Query: 459 YWIVKNSWGSDWGEK 473
           YW+VKNSWGS++GE+
Sbjct: 292 YWLVKNSWGSNFGEQ 306



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 97/160 (60%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG M +A QYIIDN G+ S+ +YPYKA++ +  C   
Sbjct: 158 KLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQK--CQY- 214

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCN 612
           + +       +Y+ +PYG E+ +K+ VA +GP+ VG++A+    F Y  GV       C 
Sbjct: 215 DSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGV--YYDPACT 272

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            K  NH ++++GYG+   K+     YW+VKNSWGS++GE+
Sbjct: 273 QKV-NHGVLVIGYGDLNGKE-----YWLVKNSWGSNFGEQ 306



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 166


>gi|326514800|dbj|BAJ99761.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 291

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 122/211 (57%), Gaps = 26/211 (12%)

Query: 295 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM- 353
           D+P + DWR +G ++ VK+QG+C  CWAFS +  VE ++AI+  +LT LS QQLVDCD  
Sbjct: 60  DVPSSVDWRQKGAVTAVKDQGQCGSCWAFSTIAAVEGINAIRTKNLTSLSEQQLVDCDTK 119

Query: 354 SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY 413
           SN GCNGG MD A QYI  +GGV ++ AYPYKA ++       ++    V +  Y  +P 
Sbjct: 120 SNAGCNGGLMDYAFQYIAKHGGVAAEDAYPYKARQASS---CNKKPSAVVTIDGYEDVPA 176

Query: 414 GEEEEMKK-WVATRGPLSVGMNANGLFYYSGGVI------DLNQRL----YGTSI---PY 459
            +E  +KK   A    +++  + +   +YS GV       +L+  +    YGT++    Y
Sbjct: 177 NDETALKKAVAAQPVAVAIEASGSHFQFYSEGVFAGKCGTELDHGVAAVGYGTTVDGTKY 236

Query: 460 WIVKNSWGSDWGEK--------VEDKVGSSG 482
           WIVKNSWG +WGEK        VEDK G  G
Sbjct: 237 WIVKNSWGPEWGEKGYIRMKRDVEDKEGLCG 267



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 13/165 (7%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +    L+ L+ ++LVDCD  SN GCNGG MD A QYI  +GGV ++ AYPYKA ++ 
Sbjct: 97  INAIRTKNLTSLSEQQLVDCDTKSNAGCNGGLMDYAFQYIAKHGGVAAEDAYPYKARQAS 156

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKK-WVATRGPLSVGMNANGLFYYSGGVIDLN 607
                 ++    V +  Y  +P  +E  +KK   A    +++  + +   +YS GV    
Sbjct: 157 S---CNKKPSAVVTIDGYEDVPANDETALKKAVAAQPVAVAIEASGSHFQFYSEGVF--- 210

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              C  +  +H +  VGYG     DGT   YWIVKNSWG +WGEK
Sbjct: 211 AGKCGTEL-DHGVAAVGYG--TTVDGTK--YWIVKNSWGPEWGEK 250



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 37/52 (71%)

Query: 147 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           D+P + DWR +G ++ VK+QG+C  CWAFS +  VE ++AI+  NLT LS Q
Sbjct: 60  DVPSSVDWRQKGAVTAVKDQGQCGSCWAFSTIAAVEGINAIRTKNLTSLSEQ 111


>gi|146215982|gb|ABQ10193.1| actinidin Act2b [Actinidia eriantha]
          Length = 378

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 157/301 (52%), Gaps = 42/301 (13%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           K Y+S+++   R E F  N+   +D+ ++ + +   G+N+F DL++ + +  T L L   
Sbjct: 51  KSYNSLDEKEMRFEIFKENLRIIDDHNADANRSYSLGLNRFADLTDEEYRS-TYLGLK-- 107

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
                     P    +TD           + G+ LP+  DWR  G +  VK QG C+ CW
Sbjct: 108 --------MGP----KTDVSNEYMP----KVGEALPDYVDWRTVGAVVGVKNQGLCSSCW 151

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSD 379
           AFSAV  VE ++ I   +L  LS Q+LVDC  +    GCN G M DA Q+II+NGG+ ++
Sbjct: 152 AFSAVTAVEGINKIVTGNLISLSEQELVDCGRTQRTKGCNRGLMTDAFQFIINNGGINTE 211

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA---- 435
             YPY A + +  C +  +    V +  Y  +P   E  +KK VA + P+SVG+ +    
Sbjct: 212 DNYPYTAKDGQ--CNLSLKNQKYVTIDNYKNVPSNNEMALKKAVAYQ-PVSVGVESEGGK 268

Query: 436 -----NGLFY-YSGGVIDLNQRL--YGT--SIPYWIVKNSWGSDWGE----KVEDKVGSS 481
                +G+F  + G  +D    +  YGT   + YWIVKNSWG++WGE    +++  +G +
Sbjct: 269 FKLYTSGIFTGFCGTAVDHGVTIVGYGTERGMDYWIVKNSWGTNWGENGYIRIQRNIGGA 328

Query: 482 G 482
           G
Sbjct: 329 G 329



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 16/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           ++   L  L+ ++LVDC  +    GCN G M DA Q+II+NGG+ ++  YPY A + +  
Sbjct: 165 IVTGNLISLSEQELVDCGRTQRTKGCNRGLMTDAFQFIINNGGINTEDNYPYTAKDGQ-- 222

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
           C +  +    V +  Y  +P   E  +KK VA + P+SVG+ + G     Y+ G+     
Sbjct: 223 CNLSLKNQKYVTIDNYKNVPSNNEMALKKAVAYQ-PVSVGVESEGGKFKLYTSGIF---T 278

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C   A +H + IVGYG E   D     YWIVKNSWG++WGE
Sbjct: 279 GFCG-TAVDHGVTIVGYGTERGMD-----YWIVKNSWGTNWGE 315



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 19/154 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++ +  K Y+S+++   R E F  N+   +D+  + + +    +N+F DL+D + + 
Sbjct: 42  YESWLVEQGKSYNSLDEKEMRFEIFKENLRIIDDHNADANRSYSLGLNRFADLTDEEYRS 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            T L L             P    +TD           + G+ LP+  DWR  G +  VK
Sbjct: 102 -TYLGLK----------MGP----KTDVSNEYMP----KVGEALPDYVDWRTVGAVVGVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C+ CWAFSAV  VE ++ I   NL  LS Q
Sbjct: 143 NQGLCSSCWAFSAVTAVEGINKIVTGNLISLSEQ 176


>gi|23577865|ref|NP_703114.1| viral cathepsin [Rachiplusia ou MNPV]
 gi|37077115|sp|Q8B9D5.1|CATV_NPVR1 RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|23476510|gb|AAN28057.1| viral cathepsin [Rachiplusia ou MNPV]
          Length = 323

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 163/338 (48%), Gaps = 49/338 (14%)

Query: 179 GVVE--AMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV 236
           GVV   A   ++  N  E  V   +K Y S  + LRR + F  N+ +       DS  A 
Sbjct: 12  GVVNSAAYDLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQNDS--AK 69

Query: 237 FGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRH 292
           + +NKF DLS+ + + + TGL+L    ++    +   Q P                    
Sbjct: 70  YEINKFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKG----------------- 112

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
               P  FDWR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS QQ++DCD
Sbjct: 113 ----PLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCD 168

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GCNGG +  A + II  GGV  +  YPY+A  +   C +   + F V+VK+  R  
Sbjct: 169 FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNTNK-FLVQVKDCYRYI 225

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYW 460
              EE++K  +   GP+ + ++A  +  Y  G+I       LN  +    YG   +IPYW
Sbjct: 226 TVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIKYCFNSGLNHAVLLVGYGVENNIPYW 285

Query: 461 IVKNSWGSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
             KN+WG+DWGE    +V+  + + G R  +L  T V+
Sbjct: 286 TFKNTWGTDWGEEGFFRVQQNINACGMRN-ELASTAVI 322



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 90/157 (57%), Gaps = 12/157 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++++DCD  + GCNGG +  A + II  GGV  +  YPY+A  +   C +  
Sbjct: 154 NQLINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN--NCRMNT 211

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            + F V+VK+  R     EE++K  +   GP+ + ++A  +  Y  G+I    + C    
Sbjct: 212 NK-FLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII----KYCFNSG 266

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NHA+++VGYG E      +IPYW  KN+WG+DWGE+
Sbjct: 267 LNHAVLLVGYGVE-----NNIPYWTFKNTWGTDWGEE 298



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 74/166 (44%), Gaps = 28/166 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +P   F  F+   +K Y S  + LRR + F  N+ +     + DS  A +E+NKF DL
Sbjct: 22  LKAP-NYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQNDS--AKYEINKFSDL 78

Query: 98  S-DSDLQQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 153
           S D  + + TGL+L    ++    +   Q P                        P  FD
Sbjct: 79  SKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKG---------------------PLEFD 117

Query: 154 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           WR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS Q 
Sbjct: 118 WRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQ 163


>gi|118197532|ref|YP_874244.1| cathepsin [Ectropis obliqua NPV]
 gi|113472527|gb|ABI35734.1| cathepsin [Ectropis obliqua NPV]
          Length = 299

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 166/317 (52%), Gaps = 37/317 (11%)

Query: 195 LSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL-QQL 253
           + V +++K+Y    +  +R+  F  N+    + +++ +G+AV+ +NKF DLS S++  + 
Sbjct: 1   MFVANYNKMYDDDLEKTKRYSIFRDNLRDI-NIKNKLNGSAVYRINKFSDLSTSEIVLKY 59

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
           TGL++  T E +  +       +Q   +               P  FDWR +  ++ +K 
Sbjct: 60  TGLSVPPT-ERLTTNFCKTIVLDQPPGKG--------------PLNFDWRHQNKVTSIKN 104

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN 373
           QG C  CWAF+ +  +E+ +AI+ N    LS QQ++DCD  + GC+GG +  A + +I+ 
Sbjct: 105 QGVCGACWAFATLASIESQYAIKHNVQINLSEQQMIDCDYVDMGCDGGLLHTAFEQMIEM 164

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GGV  +  YPY+       C +  ++ F VK+    R    +EE++K  +   GP+ + +
Sbjct: 165 GGVKHEHEYPYEG--INMNCRL-NDDNFAVKIIGCYRYIVLQEEKLKDLLRAVGPIPIAI 221

Query: 434 NANGLFYYSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE----KVEDK 477
           +A+G+  Y  GVI+      LN  +    YG   +IPYW +KN+WG DWGE    +V   
Sbjct: 222 DASGIANYYQGVINYCENHGLNHAVLLVGYGVENNIPYWTIKNTWGEDWGENGYFRVRQN 281

Query: 478 VGSSGNRTRDLELTGVL 494
           + + G  T +L  + VL
Sbjct: 282 INACG-MTNELASSAVL 297



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 87/151 (57%), Gaps = 12/151 (7%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ ++++DCD  + GC+GG +  A + +I+ GGV  +  YPY+       C +  ++ F 
Sbjct: 134 LSEQQMIDCDYVDMGCDGGLLHTAFEQMIEMGGVKHEHEYPYEG--INMNCRL-NDDNFA 190

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           VK+    R    +EE++K  +   GP+ + ++A+G+  Y  GVI+     C     NHA+
Sbjct: 191 VKIIGCYRYIVLQEEKLKDLLRAVGPIPIAIDASGIANYYQGVIN----YCENHGLNHAV 246

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           ++VGYG E      +IPYW +KN+WG DWGE
Sbjct: 247 LLVGYGVE-----NNIPYWTIKNTWGEDWGE 272



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 17/152 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL-QQLT 106
           F+ +++K+Y    +  +R+  F  N+    + + + +G+AV+ +NKF DLS S++  + T
Sbjct: 2   FVANYNKMYDDDLEKTKRYSIFRDNLRDI-NIKNKLNGSAVYRINKFSDLSTSEIVLKYT 60

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           GL++  T E +  +       +Q   +               P  FDWR +  ++ +K Q
Sbjct: 61  GLSVPPT-ERLTTNFCKTIVLDQPPGKG--------------PLNFDWRHQNKVTSIKNQ 105

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G C  CWAF+ +  +E+ +AI+ N    LS Q
Sbjct: 106 GVCGACWAFATLASIESQYAIKHNVQINLSEQ 137


>gi|224116884|ref|XP_002317418.1| predicted protein [Populus trichocarpa]
 gi|222860483|gb|EEE98030.1| predicted protein [Populus trichocarpa]
          Length = 503

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 162/323 (50%), Gaps = 59/323 (18%)

Query: 185 HAIQGNNLTELSVQ------------HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS 232
           H I  N+ +EL  +             H KVY    +  +R+ NF  N++    Y  E +
Sbjct: 30  HPIVVNDFSELVSEESIIEIFQQWRDRHQKVYEHAAESEKRYRNFKRNLK----YIIEKA 85

Query: 233 G--TAVFG----VNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 286
           G  TA  G    +NKF DLS  + ++L        L  ++  +    S+ + D   R  Q
Sbjct: 86  GKKTAALGHSVGLNKFADLSNEEFKELY-------LSKVKKPINIKRSTAR-DWRQRNLQ 137

Query: 287 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQ 346
                   D P + DWR +GV++ VK+QG C  CW+FS  G +E ++AI    L  LS Q
Sbjct: 138 TC------DAPSSLDWRKKGVVTAVKDQGDCGSCWSFSTTGAIEGINAIVTGDLISLSEQ 191

Query: 347 QLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           +LVDCD +N GC GG MD A +++I+NGG+ ++  YPY   +    C   +EE   V + 
Sbjct: 192 ELVDCDTTNYGCEGGYMDYAFEWVINNGGIDTEANYPYTGVDGT--CNTTKEEIKVVSID 249

Query: 407 EYSRIPYGEEEEMKKWVAT-RGPLSVGMNANGLFY--YSGGVI---------DLNQRL-- 452
            Y+ +   +E +     AT + P+SVGM+ + L +  Y+GG+          D++  +  
Sbjct: 250 GYTDV---DETDSALLCATVQQPISVGMDGSALDFQLYTGGIYDGDCSDDPNDIDHAVLI 306

Query: 453 --YGTSI--PYWIVKNSWGSDWG 471
             YG+     YWIVKNSWG++WG
Sbjct: 307 VGYGSENGEDYWIVKNSWGTEWG 329



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 14/164 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  ++   L  L+ ++LVDCD +N GC GG MD A +++I+NGG+ ++  YPY   +   
Sbjct: 177 INAIVTGDLISLSEQELVDCDTTNYGCEGGYMDYAFEWVINNGGIDTEANYPYTGVDGT- 235

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT-RGPLSVGMNANGLFY--YSGGVIDL 606
            C   +EE   V +  Y+ +   +E +     AT + P+SVGM+ + L +  Y+GG+ D 
Sbjct: 236 -CNTTKEEIKVVSIDGYTDV---DETDSALLCATVQQPISVGMDGSALDFQLYTGGIYDG 291

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
           +    +P   +HA++IVGYG E  +D     YWIVKNSWG++WG
Sbjct: 292 DCSD-DPNDIDHAVLIVGYGSENGED-----YWIVKNSWGTEWG 329



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 24/165 (14%)

Query: 40  SPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSG--TAVFE----VNK 93
           S +  F  +   H KVY    +  +R+ NF  N++    Y  E +G  TA       +NK
Sbjct: 45  SIIEIFQQWRDRHQKVYEHAAESEKRYRNFKRNLK----YIIEKAGKKTAALGHSVGLNK 100

Query: 94  FFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 153
           F DLS+ + ++L        L  ++  +    S+ + D   R  Q        D P + D
Sbjct: 101 FADLSNEEFKELY-------LSKVKKPINIKRSTAR-DWRQRNLQTC------DAPSSLD 146

Query: 154 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           WR +GV++ VK+QG C  CW+FS  G +E ++AI   +L  LS Q
Sbjct: 147 WRKKGVVTAVKDQGDCGSCWSFSTTGAIEGINAIVTGDLISLSEQ 191


>gi|223673161|gb|ACN12762.1| Cathepsin S precursor [Salmo salar]
          Length = 330

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 152/315 (48%), Gaps = 39/315 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL- 258
           H K Y +  + L R E +  N++    +  E S           D+   DL    G+N  
Sbjct: 34  HGKNYQTEVEELGRREVWERNLQLISLHNLEAS----------MDMHTYDL----GMNHM 79

Query: 259 -DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            D T E+I  S  +         E  AF  +S   G  +P+ FDWR +G ++ VK QG C
Sbjct: 80  GDMTQEEIAQSFASLLVPADLKREPSAFAGSS---GAPIPDTFDWREKGYVTGVKMQGSC 136

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDNGG 375
             CWAFS+VG +E         L +LS Q LVDC     N GC+GG M  A QY+IDN G
Sbjct: 137 GSCWAFSSVGALEGQLMKTTGKLIDLSPQNLVDCSSKYGNKGCHGGFMTKAFQYVIDNQG 196

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + SDQ+YPYK  + +  C+    +        YS +P G+E  +K+ +AT GP+SVG++A
Sbjct: 197 IASDQSYPYKGVQQQ--CIYNPAQ-RAANCSRYSFLPEGDEGVLKEALATIGPISVGIDA 253

Query: 436 N--GLFYYSGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGEKVEDKVGS 480
                 +Y  GV +        N  +    YGT     YW+VKNSWG  WG++   ++  
Sbjct: 254 TRPSFAFYRSGVYNDPTCTKKTNHAVLAVGYGTLGGQDYWLVKNSWGLSWGDQGYIRMSR 313

Query: 481 SGNRTRDLELTGVLP 495
           + +    + L G  P
Sbjct: 314 NKDNQCGIALYGCYP 328



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 18/189 (9%)

Query: 471 GEKVEDKVGSSGNRTRDLELTGVL---PSKLSRLATEKLVDCD--MSNGGCNGGRMDDAL 525
           G K++   GS    +    L G L     KL  L+ + LVDC     N GC+GG M  A 
Sbjct: 129 GVKMQGSCGSCWAFSSVGALEGQLMKTTGKLIDLSPQNLVDCSSKYGNKGCHGGFMTKAF 188

Query: 526 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 585
           QY+IDN G+ SDQ+YPYK  + +  C+    +        YS +P G+E  +K+ +AT G
Sbjct: 189 QYVIDNQGIASDQSYPYKGVQQQ--CIYNPAQ-RAANCSRYSFLPEGDEGVLKEALATIG 245

Query: 586 PLSVGMNAN--GLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKN 643
           P+SVG++A      +Y  GV   N   C  K  NHA++ VGYG    +D     YW+VKN
Sbjct: 246 PISVGIDATRPSFAFYRSGV--YNDPTCTKKT-NHAVLAVGYGTLGGQD-----YWLVKN 297

Query: 644 SWGSDWGEK 652
           SWG  WG++
Sbjct: 298 SWGLSWGDQ 306



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 12/138 (8%)

Query: 67  ENFVTNVE---KAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNL--DSTLEDIQPSL 121
           +N+ T VE   + E ++R     ++  +    D+   DL    G+N   D T E+I  S 
Sbjct: 36  KNYQTEVEELGRREVWERNLQLISLHNLEASMDMHTYDL----GMNHMGDMTQEEIAQSF 91

Query: 122 QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 181
            +         E  AF  +S   G  +P+ FDWR +G ++ VK QG C  CWAFS+VG +
Sbjct: 92  ASLLVPADLKREPSAFAGSS---GAPIPDTFDWREKGYVTGVKMQGSCGSCWAFSSVGAL 148

Query: 182 EAMHAIQGNNLTELSVQH 199
           E         L +LS Q+
Sbjct: 149 EGQLMKTTGKLIDLSPQN 166


>gi|218195711|gb|EEC78138.1| hypothetical protein OsI_17694 [Oryza sativa Indica Group]
          Length = 458

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 152/291 (52%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H K Y++V +  RR+  F  N+   +++ +  D+G   F  G+N+F DL+  + +  T L
Sbjct: 47  HGKNYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRD-TYL 105

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L +     +P  +   S      +  A           LPE+ DWR +G ++++K+QG 
Sbjct: 106 GLRN-----KPRRERKVSDRYLAADNEA-----------LPESVDWRTKGAVAEIKDQGG 149

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFSA+  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A  +II+NGG
Sbjct: 150 CGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGG 209

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPYK  + ER C V  +    V +  Y  +    E  ++K VA + P+SV + A
Sbjct: 210 IDTEDDYPYKGKD-ER-CDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQ-PVSVAIEA 266

Query: 436 NGLFY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            G  +  YS G+        L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 267 GGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGE 317



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A  +II+NGG+ ++  YPYK  + ER C
Sbjct: 168 IVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKD-ER-C 225

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
            V  +    V +  Y  +    E  ++K VA + P+SV + A G  +  YS G+      
Sbjct: 226 DVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQ-PVSVAIEAGGRAFQLYSSGIFTGK-- 282

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H +  VGYG E  KD     YWIV+NSWG  WGE
Sbjct: 283 -CG-TALDHGVAAVGYGTENGKD-----YWIVRNSWGKSWGE 317



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 47/264 (17%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +  +H K Y++V +  RR+  F  N+   +++    D+G   F +  N+F DL++ +
Sbjct: 40  YAEWKAEHGKNYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEE 99

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +  T L L +     +P  +   S      +  A           LPE+ DWR +G ++
Sbjct: 100 YRD-TYLGLRN-----KPRRERKVSDRYLAADNEA-----------LPESVDWRTKGAVA 142

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED-----LLRRHEN 216
           ++K+QG C  CWAFSA+  VE ++ I   +L  LS Q      +S  +     L+    +
Sbjct: 143 EIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFD 202

Query: 217 FVTN---VEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQP----SL 269
           F+ N   ++  +DY  +       G ++  D++  + + +T   +DS  ED+ P    SL
Sbjct: 203 FIINNGGIDTEDDYPYK-------GKDERCDVNRKNAKVVT---IDS-YEDVTPNSETSL 251

Query: 270 QAPFSSNQTDTEM----RAFQFNS 289
           Q   ++      +    RAFQ  S
Sbjct: 252 QKAVANQPVSVAIEAGGRAFQLYS 275


>gi|168057475|ref|XP_001780740.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667829|gb|EDQ54449.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 463

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 146/293 (49%), Gaps = 40/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ H +VY S+ +   R + F  N      +  +   +   G+NKF DL+    Q+    
Sbjct: 53  LETHSRVYRSLSEKHHRFQIFKENFLYIHAHNKQQK-SYWLGLNKFSDLTH---QEFRAQ 108

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L +   + Q   +A F     + E +                 DWR +G ++ VK+QG 
Sbjct: 109 YLGTKPVNRQRK-EANFMYEDVEAEPKV----------------DWRLKGAVTDVKDQGA 151

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFSAVG VE ++AI+   L  LS Q+LVDCD   N GCNGG MD A ++II NGG
Sbjct: 152 CGSCWAFSAVGSVEGVNAIKTGELVSLSEQELVDCDRKQNQGCNGGLMDYAFEFIIKNGG 211

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + +++ YPYKA +    C  G      V + +Y  +P   E  + K   T+ P+SV + A
Sbjct: 212 IDTEKDYPYKARDGR--CDEGRRNSKVVVIDDYQDVPTQSESALMK-ALTKNPVSVAIEA 268

Query: 436 NG--LFYYSGGVI------DLNQRL----YGT---SIPYWIVKNSWGSDWGEK 473
            G    +Y GGV       +L+  +    YGT    + YWIVKNSWG  WGEK
Sbjct: 269 GGRDFQHYQGGVFTGPCGSELDHGVLAVGYGTDDDGVNYWIVKNSWGPGWGEK 321



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 14/166 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +   +L  L+ ++LVDCD   N GCNGG MD A ++II NGG+ +++ YPYKA +  
Sbjct: 167 VNAIKTGELVSLSEQELVDCDRKQNQGCNGGLMDYAFEFIIKNGGIDTEKDYPYKARDGR 226

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C  G      V + +Y  +P   E  + K   T+ P+SV + A G    +Y GGV   
Sbjct: 227 --CDEGRRNSKVVVIDDYQDVPTQSESALMK-ALTKNPVSVAIEAGGRDFQHYQGGVF-- 281

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C  +  +H ++ VGYG ++  DG  + YWIVKNSWG  WGEK
Sbjct: 282 -TGPCGSEL-DHGVLAVGYGTDD--DG--VNYWIVKNSWGPGWGEK 321



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 21/154 (13%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  ++  H +VY S+ +   R + F  N      + ++   +    +NKF DL+    Q+
Sbjct: 49  FHQWLETHSRVYRSLSEKHHRFQIFKENFLYIHAHNKQQK-SYWLGLNKFSDLTH---QE 104

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                L +   + Q   +A F     + E +                 DWR +G ++ VK
Sbjct: 105 FRAQYLGTKPVNRQRK-EANFMYEDVEAEPKV----------------DWRLKGAVTDVK 147

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAVG VE ++AI+   L  LS Q
Sbjct: 148 DQGACGSCWAFSAVGSVEGVNAIKTGELVSLSEQ 181


>gi|375073980|gb|AFA34857.1| cathepsin L-like protein [Trypanosoma cruzi marinkellei]
          Length = 467

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 148/301 (49%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +      
Sbjct: 43  QKHGRVYKSAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFRSR---- 97

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
                     +  A F++ Q     RA +         +P A DWRA G ++ VK+QG+C
Sbjct: 98  --------YHNGAAHFAAAQE----RA-RVPVNVEVVGVPAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE+   + G+ LT LS Q LV CD ++ GC+GG M+DA ++I+  ++G 
Sbjct: 145 GSCWAFSAIGNVESQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNDAFEWIVQENDGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++++YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEESYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAANGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
                Y+GGV        +D    L G      +PYWI+KNSW + WGE    ++    N
Sbjct: 264 TSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAPVPYWIIKNSWTTLWGEDGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M+DA ++I+  ++G V ++++YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCSGGLMNDAFEWIVQENDGAVYTEESYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A     Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVELPQ-DEAQIAAWLAANGPVAVAVDATSWMTYTGGVMT----SCVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D   +PYWI+KNSW + WGE
Sbjct: 282 LDHGVLLVGY-----NDSAPVPYWIIKNSWTTLWGE 312



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 18/157 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
            ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  +
Sbjct: 35  TSQFAEFKQKHGRVYKSAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREE 93

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +                +  A F++ Q     RA +         +P A DWRA G ++
Sbjct: 94  FRSR------------YHNGAAHFAAAQE----RA-RVPVNVEVVGVPAAVDWRARGAVT 136

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG+C  CWAFSA+G VE+   + G+ LT LS Q
Sbjct: 137 AVKDQGQCGSCWAFSAIGNVESQWFLAGHPLTNLSEQ 173


>gi|449464688|ref|XP_004150061.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
 gi|449519862|ref|XP_004166953.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 377

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 149/304 (49%), Gaps = 50/304 (16%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q   K Y+S E+   R   F  N+++A+ +Q+ D  +A  GV +F DL+ S+ ++ + L 
Sbjct: 65  QKFGKSYASKEEHDHRFRVFKANLKRAQRHQALDP-SATHGVTQFSDLTPSEFRR-SFLG 122

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
           L S        L  P  +N+            +   D LP  FDWR +G +S+VK QG C
Sbjct: 123 LRSR------RLGLPADANKA----------PILPTDGLPTDFDWRDKGAVSEVKNQGSC 166

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDALQ 368
             CW+FSA G +E  + +    L  LS QQLVDCD           + GCNGG M+ A +
Sbjct: 167 GSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEKGSCDSGCNGGLMNSAFE 226

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
           Y + +GG++ +Q YPY    ++RG    ++      V  +S +   +EE++   +   GP
Sbjct: 227 YTLKSGGLMKEQDYPYTG--TDRGTCKFDKSKIAASVANFSVVSL-DEEQIAANLVKNGP 283

Query: 429 LSVGMNANGLFYYSGGV---------IDLNQRLYG-----------TSIPYWIVKNSWGS 468
           L+V +NA  +  Y  GV         +D    L G              PYWI+KNSWG+
Sbjct: 284 LAVAINAVFMQTYIKGVSCPYICSKHLDHGVLLVGYGSDGYAPIRLKDKPYWIIKNSWGA 343

Query: 469 DWGE 472
           +WGE
Sbjct: 344 NWGE 347



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 23/169 (13%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GCNGG M+ A +Y + +GG++ +Q YPY    +
Sbjct: 188 KLVSLSEQQLVDCDHECDPEEKGSCDSGCNGGLMNSAFEYTLKSGGLMKEQDYPYTG--T 245

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +RG    ++      V  +S +   +EE++   +   GPL+V +NA  +  Y  GV    
Sbjct: 246 DRGTCKFDKSKIAASVANFSVVSL-DEEQIAANLVKNGPLAVAINAVFMQTYIKGVS--C 302

Query: 608 QRLCNPKAQNHALIIVGYGEE-----EKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ K  +H +++VGYG +       KD    PYWI+KNSWG++WGE
Sbjct: 303 PYICS-KHLDHGVLLVGYGSDGYAPIRLKDK---PYWIIKNSWGANWGE 347



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 18/156 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F +   K Y+S E+   R   F  N+++A+ +Q  D  +A   V +F DL+ S+ +
Sbjct: 59  HFSVFKQKFGKSYASKEEHDHRFRVFKANLKRAQRHQALDP-SATHGVTQFSDLTPSEFR 117

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           + + L L S        L  P  +N+            +   D LP  FDWR +G +S+V
Sbjct: 118 R-SFLGLRSR------RLGLPADANKA----------PILPTDGLPTDFDWRDKGAVSEV 160

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CW+FSA G +E  + +    L  LS Q 
Sbjct: 161 KNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQ 196


>gi|386648114|gb|AFJ15104.1| mexicain-like cystein protease, partial [Jacaratia mexicana]
          Length = 323

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 150/286 (52%), Gaps = 34/286 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ--LTGLN 257
           +DK+Y ++++ + R E F  N+   ++   ++S +   G+N+F DL+  + +   +  L 
Sbjct: 29  NDKIYKNIDEKIYRFEIFKDNLMYIDETNKKNS-SYWLGLNEFADLTHDEFKAKYVGSLG 87

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
            DST+ +            Q+D E   +     +H  D PE+ DWR +G ++ VK Q  C
Sbjct: 88  EDSTIIE------------QSDDEEFPY-----KHVVDYPESIDWRQKGAVTPVKNQNPC 130

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
             CWAFS V  VE ++ I    L  LS Q+L+DCD  + GC GG    +LQY+ DN GV 
Sbjct: 131 GSCWAFSTVATVEGINKIVTGKLISLSEQELLDCDRRSHGCKGGYQTTSLQYVADN-GVH 189

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +++ YPY+  + +  C   +++G KVK+  Y R+P   E  + + +A + P+SV + + G
Sbjct: 190 TEKEYPYEKKQGK--CRAKDKKGSKVKITGYKRVPANNEVSLIQAIANQ-PVSVVVESKG 246

Query: 438 --LFYYSGGV--------IDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
               +Y GG+        +D      G    Y ++KNSWG  WGEK
Sbjct: 247 RAFQFYKGGIFEGPCGTKVDHAVTAVGYGKNYILIKNSWGPKWGEK 292



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 19/165 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  ++  KL  L+ ++L+DCD  + GC GG    +LQY+ DN GV +++ YPY+  + + 
Sbjct: 145 INKIVTGKLISLSEQELLDCDRRSHGCKGGYQTTSLQYVADN-GVHTEKEYPYEKKQGK- 202

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLN 607
            C   +++G KVK+  Y R+P   E  + + +A + P+SV + + G    +Y GG+    
Sbjct: 203 -CRAKDKKGSKVKITGYKRVPANNEVSLIQAIANQ-PVSVVVESKGRAFQFYKGGIF--- 257

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +  C  K  +HA+  VGYG+          Y ++KNSWG  WGEK
Sbjct: 258 EGPCGTKV-DHAVTAVGYGKN---------YILIKNSWGPKWGEK 292



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 20/159 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V  F ++  ++DK+Y ++++ + R E F  N+   ++  +++S +    +N+F DL+  +
Sbjct: 19  VRLFESWTLENDKIYKNIDEKIYRFEIFKDNLMYIDETNKKNS-SYWLGLNEFADLTHDE 77

Query: 102 LQQ--LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
            +   +  L  DST+ +            Q+D E   +     +H  D PE+ DWR +G 
Sbjct: 78  FKAKYVGSLGEDSTIIE------------QSDDEEFPY-----KHVVDYPESIDWRQKGA 120

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ VK Q  C  CWAFS V  VE ++ I    L  LS Q
Sbjct: 121 VTPVKNQNPCGSCWAFSTVATVEGINKIVTGKLISLSEQ 159


>gi|179959|gb|AAA35655.1| cathepsin [Homo sapiens]
 gi|248406|gb|AAB22005.1| cathepsin S [Homo sapiens]
          Length = 331

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 142/275 (51%), Gaps = 45/275 (16%)

Query: 217 FVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSN 276
            + N+E +    S D      G+N   D++  ++  LT             SL+ P    
Sbjct: 60  MLHNLEHSMGMHSYD-----LGMNHLGDMTSEEVMSLTS------------SLRVPSQWQ 102

Query: 277 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 336
           +  T    ++ N  R    LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++
Sbjct: 103 RNIT----YKSNPNR---ILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLK 155

Query: 337 GNSLTELSVQQLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 393
              L  LS Q LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C
Sbjct: 156 TGKLVTLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--C 213

Query: 394 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI----- 446
              + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV      
Sbjct: 214 QY-DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC 272

Query: 447 --DLNQRL----YG--TSIPYWIVKNSWGSDWGEK 473
             ++N  +    YG      YW+VKNSWG ++GE+
Sbjct: 273 TQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEE 307



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 158 KLVTLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 215

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 216 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 273 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 307



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVTLSAQ 165


>gi|374530932|gb|AEP83812.2| cysteine endopeptidase EP8 [Secale cereale x Triticum durum]
          Length = 364

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 123/203 (60%), Gaps = 22/203 (10%)

Query: 289 SLRHGD--DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQ 346
           S R+GD  +LP A DWR +G ++ +K+QG+C  CWAFS +  VE ++ I+   L  LS Q
Sbjct: 122 SFRYGDADNLPPAVDWRQKGAVTAIKDQGQCGSCWAFSTIVAVEGINKIRTGKLVSLSEQ 181

Query: 347 QLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKV 405
           +L+DCD ++N GC+GG MD A Q+I  N G+ ++  YPY+  +    C + +E+   V +
Sbjct: 182 ELMDCDNVNNQGCDGGLMDYAFQFIHKN-GITTESNYPYQGEQGS--CDLAKEKAHAVTI 238

Query: 406 KEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----Y 453
             Y  +P  +E  ++K VA + P+SV ++A+G    +YS GV       DL+  +    Y
Sbjct: 239 DGYEDVPANDESALQKAVAGQ-PVSVAIDASGNDFQFYSEGVFTGECSTDLDHGVAAVGY 297

Query: 454 GTS---IPYWIVKNSWGSDWGEK 473
           GT+     YWIVKNSWG DWGEK
Sbjct: 298 GTTRDGTKYWIVKNSWGEDWGEK 320



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 96/166 (57%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +   KL  L+ ++L+DCD ++N GC+GG MD A Q+I  NG + ++  YPY+  +  
Sbjct: 167 INKIRTGKLVSLSEQELMDCDNVNNQGCDGGLMDYAFQFIHKNG-ITTESNYPYQGEQGS 225

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C + +E+   V +  Y  +P  +E  ++K VA + P+SV ++A+G    +YS GV   
Sbjct: 226 --CDLAKEKAHAVTIDGYEDVPANDESALQKAVAGQ-PVSVAIDASGNDFQFYSEGVFTG 282

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C+    +H +  VGYG    +DGT   YWIVKNSWG DWGEK
Sbjct: 283 E---CSTDL-DHGVAAVGYGT--TRDGTK--YWIVKNSWGEDWGEK 320



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 2/60 (3%)

Query: 141 SLRHGD--DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           S R+GD  +LP A DWR +G ++ +K+QG+C  CWAFS +  VE ++ I+   L  LS Q
Sbjct: 122 SFRYGDADNLPPAVDWRQKGAVTAIKDQGQCGSCWAFSTIVAVEGINKIRTGKLVSLSEQ 181


>gi|391332597|ref|XP_003740719.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 146/300 (48%), Gaps = 42/300 (14%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           EL  + H+K Y   +D+ RR   F  N++K   +            N  +DL  S  +  
Sbjct: 27  ELFKRQHNKTYLQKQDVGRR-AIFEANIKKINAH------------NLLYDLGRSSYR-- 71

Query: 254 TGLN--LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
            GLN   D T ++ +      F +N+        + N   H   +P+  DWR EG ++ V
Sbjct: 72  LGLNGFADMTPDEFEKYRGTRFEANEARVSKLQHRDNRSMH---VPDTVDWRTEGYVTPV 128

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQY 369
           K QG C  CWAFS  G +E  H  +   L  LS Q LVDC     N GCNGG MD+A ++
Sbjct: 129 KNQGVCGSCWAFSTTGALEGQHFRRSGDLVSLSEQMLVDCSAVYGNAGCNGGLMDNAFRF 188

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           I D GG+ ++++YPY   +   G    +  G   K+  +  +P  +EE +K+     GP+
Sbjct: 189 IKDAGGLETEKSYPYTGKD---GTCHFDARGIGAKLTGFVDVPSRDEEALKEAAGVVGPV 245

Query: 430 SVGMNANG--LFYYSGGVID--------LNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           SV ++A+G    +Y  GV D        L+  +    YGT+     YW+VKNSWGS WG+
Sbjct: 246 SVAIDASGQNFQFYKDGVYDEITCSSTSLDHGVLVVGYGTTRDGKDYWLVKNSWGSSWGQ 305



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 91/158 (57%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ + LVDC     N GCNGG MD+A ++I D GG+ ++++YPY   +   G    +
Sbjct: 157 LVSLSEQMLVDCSAVYGNAGCNGGLMDNAFRFIKDAGGLETEKSYPYTGKD---GTCHFD 213

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCNP 613
             G   K+  +  +P  +EE +K+     GP+SV ++A+G    +Y  GV D  +  C+ 
Sbjct: 214 ARGIGAKLTGFVDVPSRDEEALKEAAGVVGPVSVAIDASGQNFQFYKDGVYD--EITCSS 271

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            + +H +++VGYG    +DG    YW+VKNSWGS WG+
Sbjct: 272 TSLDHGVLVVGYG--TTRDGKD--YWLVKNSWGSSWGQ 305



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 68/153 (44%), Gaps = 20/153 (13%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           F R H+K Y   +D+ RR   F  N++K   +            N  +DL  S  +   G
Sbjct: 29  FKRQHNKTYLQKQDVGRR-AIFEANIKKINAH------------NLLYDLGRSSYR--LG 73

Query: 108 LN--LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 165
           LN   D T ++ +      F +N+        + N   H   +P+  DWR EG ++ VK 
Sbjct: 74  LNGFADMTPDEFEKYRGTRFEANEARVSKLQHRDNRSMH---VPDTVDWRTEGYVTPVKN 130

Query: 166 QGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           QG C  CWAFS  G +E  H  +  +L  LS Q
Sbjct: 131 QGVCGSCWAFSTTGALEGQHFRRSGDLVSLSEQ 163


>gi|10336513|dbj|BAB13759.1| cysteine proteinase [Astragalus sinicus]
          Length = 343

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 144/292 (49%), Gaps = 37/292 (12%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            + K+Y+  ++  +R + F  NV   E    E       GVN+F DL+  +         
Sbjct: 45  QYAKIYNDHQEWEKRFQIFKENVNYIETSNKEGGRFYKLGVNQFVDLTNEEF-------- 96

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                 I P  +  F  +   + +R   +    +   +P   DWR +G ++ VK+QG+C 
Sbjct: 97  ------IAP--RNRFKGHMCSSIIRTNTYK-YENVTTVPSNVDWRQKGAVTPVKDQGQCG 147

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGV 376
           CCWAFSAV   E +H +    L  LS Q+LVDCD    + GC GG MDDA ++II N G+
Sbjct: 148 CCWAFSAVAATEGIHQLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGL 207

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPY+  +    C   E       +  Y  +P   E+ ++K VA + P+SV ++A+
Sbjct: 208 DTEAKYPYQGVDGT--CNANEASINAATITSYEDVPTNNEQALQKAVANQ-PISVAIDAS 264

Query: 437 G--LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
           G    +Y+ GV       +L+  +    YG S     YW+VKNSWG+ WGE+
Sbjct: 265 GSDFQFYTSGVFTGSCGTELDHGVTAVGYGVSDDGTKYWLVKNSWGTSWGEE 316



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG MDDA ++II N G+ ++  YPY+  +    C   
Sbjct: 168 KLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLDTEAKYPYQGVDGT--CNAN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           E       +  Y  +P   E+ ++K VA + P+SV ++A+G    +Y+ GV   +   C 
Sbjct: 226 EASINAATITSYEDVPTNNEQALQKAVANQ-PISVAIDASGSDFQFYTSGVFTGS---CG 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG  +  DGT   YW+VKNSWG+ WGE+
Sbjct: 282 TEL-DHGVTAVGYGVSD--DGTK--YWLVKNSWGTSWGEE 316



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + K+Y+  ++  +R + F  NV   E   +E        VN+F DL++ +  
Sbjct: 38  RHQQWMGQYAKIYNDHQEWEKRFQIFKENVNYIETSNKEGGRFYKLGVNQFVDLTNEEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                        I P  +  F  +   + +R   +    +   +P   DWR +G ++ V
Sbjct: 97  -------------IAP--RNRFKGHMCSSIIRTNTYK-YENVTTVPSNVDWRQKGAVTPV 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C CCWAFSAV   E +H +    L  LS Q
Sbjct: 141 KDQGQCGCCWAFSAVAATEGIHQLSTGKLISLSEQ 175


>gi|544129|sp|P25803.2|CYSEP_PHAVU RecName: Full=Vignain; AltName: Full=Bean endopeptidase; AltName:
           Full=Cysteine proteinase EP-C1; Flags: Precursor
 gi|20994|emb|CAA44816.1| endopeptidase [Phaseolus vulgaris]
          Length = 362

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 153/313 (48%), Gaps = 33/313 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H  V  S+ +  +R   F  N+    +    D    +  +NKF D++  + +        
Sbjct: 46  HHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKL-KLNKFADMTNHEFRSTYA---- 100

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                    +  P     T  E  AF +  +     +P + DWR +G ++ VK+QG+C  
Sbjct: 101 ------GSKVNHPRMFRGTPHENGAFMYEKVV---SVPPSVDWRKKGAVTDVKDQGQCGS 151

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS V  VE ++ I+ N L  LS Q+LVDCD   N GCNGG M+ A ++I   GG+ +
Sbjct: 152 CWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITT 211

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG- 437
           +  YPYKA E    C   +     V +  +  +P  +E+ + K VA + P+SV ++A G 
Sbjct: 212 ESNYPYKAQEGT--CDASKVNDLAVSIDGHENVPANDEDALLKAVANQ-PVSVAIDAGGS 268

Query: 438 -LFYYSGGVI------DLNQRL----YGTSIP---YWIVKNSWGSDWGEKVEDKVGSSGN 483
              +YS GV       DLN  +    YGT++    YWIV+NSWG +WGE    ++  + +
Sbjct: 269 DFQFYSEGVFTGDCSTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRNIS 328

Query: 484 RTRDLELTGVLPS 496
           +   L    +LPS
Sbjct: 329 KKEGLCGIAMLPS 341



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 18/164 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +  +KL  L+ ++LVDCD   N GCNGG M+ A ++I   GG+ ++  YPYKA E    C
Sbjct: 167 IKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGT--C 224

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI--DLN 607
              +     V +  +  +P  +E+ + K VA + P+SV ++A G    +YS GV   D +
Sbjct: 225 DASKVNDLAVSIDGHENVPANDEDALLKAVANQ-PVSVAIDAGGSDFQFYSEGVFTGDCS 283

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             L      NH + IVGYG     DGT+  YWIV+NSWG +WGE
Sbjct: 284 TDL------NHGVAIVGYG--TTVDGTN--YWIVRNSWGPEWGE 317



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  S+ +  +R   F  N+    +  + D    + ++NKF D+++ + +      
Sbjct: 44  RSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKL-KLNKFADMTNHEFRSTYA-- 100

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
                      +  P     T  E  AF +  +     +P + DWR +G ++ VK+QG+C
Sbjct: 101 --------GSKVNHPRMFRGTPHENGAFMYEKVV---SVPPSVDWRKKGAVTDVKDQGQC 149

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 150 GSCWAFSTVVAVEGINQIKTNKLVALSEQ 178


>gi|431896621|gb|ELK06033.1| Cathepsin S [Pteropus alecto]
          Length = 331

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/197 (41%), Positives = 116/197 (58%), Gaps = 23/197 (11%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSLDWRDKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKV-KEYSRI 411
            SN GCNGG M  A QYIIDN G+ S+ +YPYKA + +       +  F+     +Y+ +
Sbjct: 175 YSNKGCNGGFMTSAFQYIIDNNGIDSEASYPYKAQDGK----CQYDSKFRAATCSKYTEL 230

Query: 412 PYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV-------IDLNQRL----YGT--S 456
           P+G EE +K+ VA +GP+SV ++A+    F Y  GV       + +N  +    YG    
Sbjct: 231 PFGSEEALKEAVANKGPVSVAIDASHPSFFLYRSGVYYDQSCTLKVNHGVLVVGYGNLDG 290

Query: 457 IPYWIVKNSWGSDWGEK 473
             YW+VKNSWG ++G+K
Sbjct: 291 KDYWLVKNSWGLNFGDK 307



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 18/162 (11%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC     SN GCNGG M  A QYIIDN G+ S+ +YPYKA + +     
Sbjct: 158 KLVSLSAQNLVDCSTEKYSNKGCNGGFMTSAFQYIIDNNGIDSEASYPYKAQDGK----C 213

Query: 554 GEEEGFKVKV-KEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRL 610
             +  F+     +Y+ +P+G EE +K+ VA +GP+SV ++A+    F Y  GV     + 
Sbjct: 214 QYDSKFRAATCSKYTELPFGSEEALKEAVANKGPVSVAIDASHPSFFLYRSGV--YYDQS 271

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           C  K  NH +++VGYG  + KD     YW+VKNSWG ++G+K
Sbjct: 272 CTLKV-NHGVLVVGYGNLDGKD-----YWLVKNSWGLNFGDK 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 115 LPDSLDWRDKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQN 166


>gi|33622213|ref|NP_891858.1| cathepsin [Cryptophlebia leucotreta granulovirus]
 gi|33569322|gb|AAQ21608.1| cathepsin [Cryptophlebia leucotreta granulovirus]
          Length = 332

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 165/316 (52%), Gaps = 38/316 (12%)

Query: 176 SAVGVVEAM--HAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSG 233
           SA   +E++  +  Q   L +  V+ ++K Y + E+ + + +NF  N+    + ++  S 
Sbjct: 11  SAFSFIESVIYNLEQSEKLFDSFVKQYNKTYLTEEERMIKFDNFKNNLRIINE-KNRGSK 69

Query: 234 TAVFGVNKFFDLSESDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH 292
            AVF +NK+ DL+++DL +  TG  L                 N + T ++      ++ 
Sbjct: 70  HAVFDINKYSDLNKNDLLRHTTGFKLG-------------LKKNYSFTTVKECGVVEIKE 116

Query: 293 GDD--LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVD 350
                LPE FDWR +  ++ VK Q  C  CWAFS +G +E+++ I+ + + +LS Q L++
Sbjct: 117 EPQVLLPETFDWRDKHGVTPVKNQLICGSCWAFSTIGNIESLYNIKYDKVIDLSEQHLIN 176

Query: 351 CDMSNGGCNGGRMDDALQYII-DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
           CD+ N GCNGG M  AL+ I+ + GGVVS++  PY   +S     V ++  +++ +    
Sbjct: 177 CDLVNNGCNGGLMHWALENILQEGGGVVSEENDPYYGLDS-----VCKKTPWELNISGCK 231

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLYGTS------------- 456
           R     E ++K+ +   GP+SV ++ + +  Y  G+ D+ +   G +             
Sbjct: 232 RYILQNENKLKELLVVNGPISVAIDVSDVINYKSGIADICENNNGLNHAVLLVGYGEYDE 291

Query: 457 IPYWIVKNSWGSDWGE 472
           +PYWI+KNSWG +WGE
Sbjct: 292 VPYWILKNSWGIEWGE 307



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 95/163 (58%), Gaps = 14/163 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYII-DNGGVVSDQAYPYKASESE 548
           L  +   K+  L+ + L++CD+ N GCNGG M  AL+ I+ + GGVVS++  PY   +S 
Sbjct: 158 LYNIKYDKVIDLSEQHLINCDLVNNGCNGGLMHWALENILQEGGGVVSEENDPYYGLDS- 216

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
               V ++  +++ +    R     E ++K+ +   GP+SV ++ + +  Y  G+ D+ +
Sbjct: 217 ----VCKKTPWELNISGCKRYILQNENKLKELLVVNGPISVAIDVSDVINYKSGIADICE 272

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              N    NHA+++VGYGE ++     +PYWI+KNSWG +WGE
Sbjct: 273 ---NNNGLNHAVLLVGYGEYDE-----VPYWILKNSWGIEWGE 307



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 23/191 (12%)

Query: 14  LGYLHTFMIKVAL--LESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVT 71
           + +L  F++  A   +ES I+     L      F +F++ ++K Y + E+ + + +NF  
Sbjct: 1   MKFLSLFLLVSAFSFIESVIYN----LEQSEKLFDSFVKQYNKTYLTEEERMIKFDNFKN 56

Query: 72  NVEKAEDYQREDSGTAVFEVNKFFDLSDSDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQT 130
           N+    +  R  S  AVF++NK+ DL+ +DL +  TG  L                 N +
Sbjct: 57  NLRIINEKNR-GSKHAVFDINKYSDLNKNDLLRHTTGFKLG-------------LKKNYS 102

Query: 131 DTEMRAFQFNSLRHGDD--LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
            T ++      ++      LPE FDWR +  ++ VK Q  C  CWAFS +G +E+++ I+
Sbjct: 103 FTTVKECGVVEIKEEPQVLLPETFDWRDKHGVTPVKNQLICGSCWAFSTIGNIESLYNIK 162

Query: 189 GNNLTELSVQH 199
            + + +LS QH
Sbjct: 163 YDKVIDLSEQH 173


>gi|359485281|ref|XP_002280230.2| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase
           CEP1 [Vitis vinifera]
          Length = 341

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 156/308 (50%), Gaps = 47/308 (15%)

Query: 191 NLTELSV--QHHD------KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKF 242
           NL E S+  +H D      +VY   ++  +R++ F  NV + E +      +    +N+F
Sbjct: 29  NLHEASMYERHEDWMAQYGRVYKDADEKSKRYKIFKDNVARIESFNKAMDKSYKLSINEF 88

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
            DL+  +                  + +  F ++   TE  +F++ ++     +P   DW
Sbjct: 89  ADLTNEEF----------------GTSRNRFKAHICSTEATSFKYENVTA---VPSTIDW 129

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNG 360
           R +G ++ +K+QG+C  CWAFSAV  +E +  +    L  LS Q+LVDCD S  + GCNG
Sbjct: 130 RKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQGCNG 189

Query: 361 GRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMK 420
           G MDDA ++I  N G+ ++  YPY  ++    C   +      K+  Y  +P   E+ ++
Sbjct: 190 GLMDDAFKFIKQNHGLTTEANYPYAGTDGT--CNRKKAAHPAAKINGYEDVPANNEKALQ 247

Query: 421 KWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNS 465
           K V  + P++V ++A G    +YS GV       +L+  +    YGTS   + YW+VKNS
Sbjct: 248 KAVVHQ-PIAVAIDAGGFEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKNS 306

Query: 466 WGSDWGEK 473
           WG+ WGE+
Sbjct: 307 WGTGWGEE 314



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD S  + GCNGG MDDA ++I  N G+ ++  YPY  ++ 
Sbjct: 159 ITQLSTGKLISLSEQELVDCDTSGEDQGCNGGLMDDAFKFIKQNHGLTTEANYPYAGTDG 218

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C   +      K+  Y  +P   E+ ++K V  + P++V ++A G    +YS GV  
Sbjct: 219 T--CNRKKAAHPAAKINGYEDVPANNEKALQKAVVHQ-PIAVAIDAGGFEFQFYSSGVFT 275

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H +  VGYG  +  DG  + YW+VKNSWG+ WGE+
Sbjct: 276 GQ---CGTEL-DHGVAAVGYGTSD--DG--MKYWLVKNSWGTGWGEE 314



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 19/166 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R  ++M  + +VY   ++  +R++ F  NV + E + +    +    +N+F DL++ +  
Sbjct: 38  RHEDWMAQYGRVYKDADEKSKRYKIFKDNVARIESFNKAMDKSYKLSINEFADLTNEEF- 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                           + +  F ++   TE  +F++ ++     +P   DWR +G ++ +
Sbjct: 97  ---------------GTSRNRFKAHICSTEATSFKYENVTA---VPSTIDWRKKGAVTPI 138

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED 209
           K+QG+C  CWAFSAV  +E +  +    L  LS Q      +S ED
Sbjct: 139 KDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGED 184


>gi|194352762|emb|CAQ00109.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326517250|dbj|BAJ99991.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 367

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 26/221 (11%)

Query: 285 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELS 344
           F   S     D+P + DWR +G ++ VK+QG+C  CWAFS +  VE ++AI+  +LT LS
Sbjct: 126 FMHGSAASVRDVPPSVDWRQKGAVTAVKDQGQCGSCWAFSTIAAVEGINAIRSKNLTSLS 185

Query: 345 VQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKV 403
            QQLVDCD  SN GCNGG MD A QYI  +GGV ++ AYPYKA ++       ++    V
Sbjct: 186 EQQLVDCDTKSNAGCNGGLMDYAFQYIAKHGGVAAEDAYPYKARQASS---CNKKPSAVV 242

Query: 404 KVKEYSRIPYGEEEEMKK-WVATRGPLSVGMNANGLFYYSGGVI------DLNQRL---- 452
            +  Y  +P  +E  +KK   A    +++  + +   +YS GV       +L+  +    
Sbjct: 243 TIDGYEDVPANDETALKKAVAAQPVAVAIEASGSHFQFYSEGVFAGKCGTELDHGVAAVG 302

Query: 453 YGTSI---PYWIVKNSWGSDWGEK--------VEDKVGSSG 482
           YGT++    YWIVKNSWG +WGEK        V+DK G  G
Sbjct: 303 YGTTVDGTKYWIVKNSWGPEWGEKGYIRMKRDVKDKEGLCG 343



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 13/165 (7%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +    L+ L+ ++LVDCD  SN GCNGG MD A QYI  +GGV ++ AYPYKA ++ 
Sbjct: 173 INAIRSKNLTSLSEQQLVDCDTKSNAGCNGGLMDYAFQYIAKHGGVAAEDAYPYKARQAS 232

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKK-WVATRGPLSVGMNANGLFYYSGGVIDLN 607
                 ++    V +  Y  +P  +E  +KK   A    +++  + +   +YS GV    
Sbjct: 233 S---CNKKPSAVVTIDGYEDVPANDETALKKAVAAQPVAVAIEASGSHFQFYSEGVFAGK 289

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              C  +  +H +  VGYG     DGT   YWIVKNSWG +WGEK
Sbjct: 290 ---CGTEL-DHGVAAVGYG--TTVDGTK--YWIVKNSWGPEWGEK 326



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R+   V   + +  RR   F  NV    ++ R D+   +  +N+F D++  + ++     
Sbjct: 51  REQHTVARDLGEKARRFNVFRENVRLIHEFNRGDAPYKL-RLNRFGDMTADEFRR----- 104

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
                   + S    FS  +       F   S     D+P + DWR +G ++ VK+QG+C
Sbjct: 105 ---AYASSRVSHHRMFSLKEGGG---GFMHGSAASVRDVPPSVDWRQKGAVTAVKDQGQC 158

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS +  VE ++AI+  NLT LS Q
Sbjct: 159 GSCWAFSTIAAVEGINAIRSKNLTSLSEQ 187


>gi|224105327|ref|XP_002313770.1| predicted protein [Populus trichocarpa]
 gi|222850178|gb|EEE87725.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 154/331 (46%), Gaps = 64/331 (19%)

Query: 180 VVEAMHAIQGNNLTELSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSED 231
           VVE       N LT  + QHH         K Y S E+   R   F +N+ +A  +Q  D
Sbjct: 34  VVEGQDESSSNLLT--AEQHHFSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLD 91

Query: 232 SGTAVFGVNKFFDLSESDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSL 290
             TA  GV +F DL+ ++  +Q+ GL            L+ P  +N             +
Sbjct: 92  P-TASHGVTQFSDLTSAEFRKQVLGLR----------KLRLPKDANTA----------PI 130

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVD 350
              +DLPE FDWR +G +  VK QG C  CW+FS  G +E  H +    L  LS QQLVD
Sbjct: 131 LPTNDLPEDFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVD 190

Query: 351 CDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 401
           CD           + GCNGG M+ A +Y +  GG++ ++ YPY     +RG    ++   
Sbjct: 191 CDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG--MDRGACKFDKNKV 248

Query: 402 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQRL------ 452
              V  +S +   +E+++   +   GPL+V +NA  +  Y GGV      ++RL      
Sbjct: 249 AAGVANFSAVSL-DEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVLL 307

Query: 453 --YGTSI---------PYWIVKNSWGSDWGE 472
             YG++          PYWI+KNSWG  WGE
Sbjct: 308 VGYGSAAYAPVRMKEKPYWIIKNSWGESWGE 338



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 17/166 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M+ A +Y +  GG++ ++ YPY   + 
Sbjct: 179 ELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGMD- 237

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
            RG    ++      V  +S +   +E+++   +   GPL+V +NA  +  Y GGV    
Sbjct: 238 -RGACKFDKNKVAAGVANFSAVSL-DEDQIAANLVKNGPLAVAINAVFMQTYIGGVS--C 293

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKD--GTSIPYWIVKNSWGSDWGE 651
             +C+ +  +H +++VGYG            PYWI+KNSWG  WGE
Sbjct: 294 PYICS-RRLDHGVLLVGYGSAAYAPVRMKEKPYWIIKNSWGESWGE 338



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 22/163 (13%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +    F  F R   K Y S E+   R   F +N+ +A  +Q+ D  TA   V +F DL
Sbjct: 46  LTAEQHHFSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDP-TASHGVTQFSDL 104

Query: 98  SDSDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           + ++  +Q+ GL            L+ P  +N             +   +DLPE FDWR 
Sbjct: 105 TSAEFRKQVLGLR----------KLRLPKDANTA----------PILPTNDLPEDFDWRE 144

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +G +  VK QG C  CW+FS  G +E  H +    L  LS Q 
Sbjct: 145 KGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQ 187


>gi|357474725|ref|XP_003607647.1| Cysteine proteinase [Medicago truncatula]
 gi|355508702|gb|AES89844.1| Cysteine proteinase [Medicago truncatula]
          Length = 340

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 147/293 (50%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + K+Y    +  +R   F  NVE  E + + D+      VN   DL           
Sbjct: 44  MSEYGKLYKDAIEKEKRFMIFKDNVEFIESFNAADNKPYKLSVNHLADL----------- 92

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               TL++ + S    +     +    +F++ ++     +PEA DWR +G ++ +K+QG+
Sbjct: 93  ----TLDEFKASRNG-YKKIDREFATTSFKYENVTA---IPEAVDWRVKGAVTPIKDQGQ 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C  CWAFS V  +E ++ I    L  LS Q+LVDCD    + GC GG M+D  ++II NG
Sbjct: 145 CGSCWAFSTVAAIEGINQITTGKLISLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNG 204

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ S+  YPYKA++   G           K+  Y ++P   E  + K VA + P+SV ++
Sbjct: 205 GITSETNYPYKAAD---GSCNTATTAPVAKITGYEKVPVNSEISLLKAVANQ-PISVSID 260

Query: 435 A--NGLFYYSGGV------IDLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           A  +   +YS G+       +L+  +    YG++    YWIVKNSWG+ WGEK
Sbjct: 261 ASDSSFMFYSSGIYTGECGTELDHGVTAVGYGSANGTDYWIVKNSWGTVWGEK 313



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 17/164 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           +   KL  L+ ++LVDCD    + GC GG M+D  ++II NGG+ S+  YPYKA++   G
Sbjct: 163 ITTGKLISLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNGGITSETNYPYKAAD---G 219

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQ 608
                      K+  Y ++P   E  + K VA + P+SV ++A  +   +YS G+     
Sbjct: 220 SCNTATTAPVAKITGYEKVPVNSEISLLKAVANQ-PISVSIDASDSSFMFYSSGIYTGE- 277

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  +H +  VGYG     D     YWIVKNSWG+ WGEK
Sbjct: 278 --CGTEL-DHGVTAVGYGSANGTD-----YWIVKNSWGTVWGEK 313



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 19/155 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M ++ K+Y    +  +R   F  NVE  E +   D+      VN   DL      
Sbjct: 39  RHEQWMSEYGKLYKDAIEKEKRFMIFKDNVEFIESFNAADNKPYKLSVNHLADL------ 92

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                    TL++ + S    +     +    +F++ ++     +PEA DWR +G ++ +
Sbjct: 93  ---------TLDEFKASRNG-YKKIDREFATTSFKYENVTA---IPEAVDWRVKGAVTPI 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFS V  +E ++ I    L  LS Q
Sbjct: 140 KDQGQCGSCWAFSTVAAIEGINQITTGKLISLSEQ 174


>gi|61368403|gb|AAX43172.1| cathepsin S [synthetic construct]
          Length = 332

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 175 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 232 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 291

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 292 EYWLVKNSWGHNFGEE 307



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 158 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 215

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 216 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 273 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQ 165


>gi|38345008|emb|CAD40026.2| OSJNBa0052O21.11 [Oryza sativa Japonica Group]
 gi|125589414|gb|EAZ29764.1| hypothetical protein OsJ_13822 [Oryza sativa Japonica Group]
          Length = 339

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 153/311 (49%), Gaps = 47/311 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + +VY    +  RR E F  NV   E + + +    + GVN+F DL+  + + +   
Sbjct: 41  MAQYGRVYRDDAEKARRFEVFKANVAFIESFNAGNHNFWL-GVNQFADLTNDEFRWM--- 96

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T +   PS      + +  T  R    N     D LP   DWR +G ++ +K+QG+
Sbjct: 97  ---KTNKGFIPS------TTRVPTGFRYENVNI----DALPATVDWRTKGAVTPIKDQGQ 143

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV  +E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II NG
Sbjct: 144 CGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNG 203

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPY A++ +   +          +K Y  +P   E  + K VA + P+SV ++
Sbjct: 204 GLTTESNYPYAAADDKCKSVSNS----VASIKGYEDVPANNEAALMKAVANQ-PVSVAVD 258

Query: 435 ANGLF--YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK------ 473
              +   +Y GGV+      DL+  +    YG +     YW++KNSWG+ WGE       
Sbjct: 259 GGDMTFQFYKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYWLLKNSWGTTWGENGFLRME 318

Query: 474 --VEDKVGSSG 482
             + DK G  G
Sbjct: 319 KDISDKRGMCG 329



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+ ++  YPY A++ +   +  
Sbjct: 166 KLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYAAADDKCKSVSN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P   E  + K VA + P+SV ++   +   +Y GGV+  +   C 
Sbjct: 226 S----VASIKGYEDVPANNEAALMKAVANQ-PVSVAVDGGDMTFQFYKGGVMTGS---CG 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H ++ +GYG+    DGT   YW++KNSWG+ WGE   L
Sbjct: 278 TD-LDHGIVAIGYGKAS--DGTK--YWLLKNSWGTTWGENGFL 315



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 21/159 (13%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF--EVNKFFDLSD 99
             R   +M  + +VY    +  RR E F  NV   E +   ++G   F   VN+F DL++
Sbjct: 34  AARHERWMAQYGRVYRDDAEKARRFEVFKANVAFIESF---NAGNHNFWLGVNQFADLTN 90

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
            + + +       T +   PS      + +  T  R    N     D LP   DWR +G 
Sbjct: 91  DEFRWM------KTNKGFIPS------TTRVPTGFRYENVNI----DALPATVDWRTKGA 134

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ +K+QG+C CCWAFSAV  +E +  +    L  LS Q
Sbjct: 135 VTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQ 173


>gi|4426617|gb|AAD20453.1| cysteine endopeptidase precursor [Oryza sativa]
          Length = 368

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 144/292 (49%), Gaps = 36/292 (12%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGL 256
           Q H  V     +  RR   F  NV    ++     G     +N+F D+   + +    G 
Sbjct: 50  QEHHHVPRHHGEKHRRFGAFKDNVRYIHEHNKRAPGYPP--LNRFGDMGREEFRATFAGS 107

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           + +    D    L AP         +  F +  +R   DLP A DWR +G ++ VK+QGK
Sbjct: 108 HANDLRRD---GLAAP--------PLPGFMYEGVR---DLPRAVDWRRKGAVTGVKDQGK 153

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS V  VE ++AI+   L  LS Q+L+DCD + N GC GG M++A +YI  +GG
Sbjct: 154 CGSCWAFSTVVSVEGINAIRTGRLVSLSEQELIDCDTADNSGCQGGLMENAFEYIKHSGG 213

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++ AYPY+A+     C      G  V +  +  +P   E  + K VA + P+SV ++A
Sbjct: 214 ITTESAYPYRAANGT--CDAVRARGGLVVIDGHQNVPANSEAALAKAVANQ-PVSVAIDA 270

Query: 436 --NGLFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
                 +YS GV       DL+  +    YG +     YWIVKNSWG+ WGE
Sbjct: 271 GDQSFQFYSDGVFAGDCGTDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGE 322



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 18/167 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +   +L  L+ ++L+DCD + N GC GG M++A +YI  +GG+ ++ AYPY+A+   
Sbjct: 169 INAIRTGRLVSLSEQELIDCDTADNSGCQGGLMENAFEYIKHSGGITTESAYPYRAANGT 228

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI-- 604
             C      G  V +  +  +P   E  + K VA + P+SV ++A      +YS GV   
Sbjct: 229 --CDAVRARGGLVVIDGHQNVPANSEAALAKAVANQ-PVSVAIDAGDQSFQFYSDGVFAG 285

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           D    L      +H + +VGYG  E  DGT   YWIVKNSWG+ WGE
Sbjct: 286 DCGTDL------DHGVAVVGYG--ETNDGTE--YWIVKNSWGTAWGE 322



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 17/150 (11%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGL 108
           ++H  V     +  RR   F  NV    ++ +   G     +N+F D+   + +    G 
Sbjct: 50  QEHHHVPRHHGEKHRRFGAFKDNVRYIHEHNKRAPGYP--PLNRFGDMGREEFRATFAGS 107

Query: 109 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 168
           + +    D    L AP         +  F +  +R   DLP A DWR +G ++ VK+QGK
Sbjct: 108 HANDLRRD---GLAAP--------PLPGFMYEGVR---DLPRAVDWRRKGAVTGVKDQGK 153

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           C  CWAFS V  VE ++AI+   L  LS Q
Sbjct: 154 CGSCWAFSTVVSVEGINAIRTGRLVSLSEQ 183


>gi|1345573|emb|CAA40073.1| endopeptidase (EP-C1) [Phaseolus vulgaris]
          Length = 361

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 161/324 (49%), Gaps = 27/324 (8%)

Query: 196 SVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG 255
           S   HDK  +S E L   +E + ++   +     +     VF  N     + + + +   
Sbjct: 21  SFDFHDKDLASEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYK 80

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD-------DLPEAFDWRAEGVI 308
           L L+   +      ++ ++ ++ +   R F+     +G         +P + DWR +G +
Sbjct: 81  LKLNKFADMTNHEFRSTYAGSKVN-HHRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAV 139

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDAL 367
           + VK+QG+C  CWAFS V  VE ++ I+ N L  LS Q+LVDCD   N GCNGG M+ A 
Sbjct: 140 TDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLMESAF 199

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           ++I   GG+ ++  YPYKA E    C   +     V +  +  +P  +E+ + K VA + 
Sbjct: 200 EFIKQKGGITTESNYPYKAQEGT--CDASKVNDLAVSIDGHENVPANDEDALLKAVANQ- 256

Query: 428 PLSVGMNANG--LFYYSGGVI------DLNQRL----YGTSIP---YWIVKNSWGSDWGE 472
           P+SV ++A G    +YS GV       DLN  +    YGT++    YWIV+NSWG +WGE
Sbjct: 257 PVSVAIDAGGSDFQFYSEGVFTGDCSTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGE 316

Query: 473 KVEDKVGSSGNRTRDLELTGVLPS 496
               ++  + ++   L    +LPS
Sbjct: 317 HGYIRMQRNISKKEGLCGIAMLPS 340



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 18/164 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +  +KL  L+ ++LVDCD   N GCNGG M+ A ++I   GG+ ++  YPYKA E    C
Sbjct: 166 IKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGT--C 223

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI--DLN 607
              +     V +  +  +P  +E+ + K VA + P+SV ++A G    +YS GV   D +
Sbjct: 224 DASKVNDLAVSIDGHENVPANDEDALLKAVANQ-PVSVAIDAGGSDFQFYSEGVFTGDCS 282

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             L      NH + IVGYG     DGT+  YWIV+NSWG +WGE
Sbjct: 283 TDL------NHGVAIVGYG--TTVDGTN--YWIVRNSWGPEWGE 316



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  S+ +  +R   F  N+    +  + D    + ++NKF D+++ + +      
Sbjct: 43  RSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKL-KLNKFADMTNHEFR------ 95

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             ST    + +    F    T  E  AF +  +     +P + DWR +G ++ VK+QG+C
Sbjct: 96  --STYAGSKVNHHRMFRG--TPHENGAFMYEKVV---SVPPSVDWRKKGAVTDVKDQGQC 148

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 149 GSCWAFSTVVAVEGINQIKTNKLVALSEQ 177


>gi|23110962|ref|NP_004070.3| cathepsin S isoform 1 preproprotein [Homo sapiens]
 gi|88984046|sp|P25774.3|CATS_HUMAN RecName: Full=Cathepsin S; Flags: Precursor
 gi|60816153|gb|AAX36372.1| cathepsin S [synthetic construct]
 gi|61358282|gb|AAX41541.1| cathepsin S [synthetic construct]
 gi|119573903|gb|EAW53518.1| cathepsin S, isoform CRA_b [Homo sapiens]
 gi|119573904|gb|EAW53519.1| cathepsin S, isoform CRA_b [Homo sapiens]
          Length = 331

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 175 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 232 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 291

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 292 EYWLVKNSWGHNFGEE 307



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 158 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 215

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 216 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 273 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQ 165


>gi|195124431|ref|XP_002006696.1| GI21205 [Drosophila mojavensis]
 gi|193911764|gb|EDW10631.1| GI21205 [Drosophila mojavensis]
          Length = 339

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 152/297 (51%), Gaps = 38/297 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEK-AEDYQSEDSGTAVF--GVNKFFDLSESDLQQ-LTG 255
           H K Y    +   R + F  N  K A+  Q   +G   F   VNK+ D+   + ++ + G
Sbjct: 34  HRKTYQDETEERFRLKIFNENKHKIAKHNQRYATGEVTFKMAVNKYADMLHHEFRETMNG 93

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
            N       +   L+A      +D       F S  H   LP++ DWR +G ++ VK+QG
Sbjct: 94  FNYT-----LHKELRA------SDPSFTGITFISPAH-VKLPKSVDWREKGAVTAVKDQG 141

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDN 373
            C  CWAFS+ G +E  H  +  +L  LS Q LVDC     N GCNGG MD+A +YI DN
Sbjct: 142 HCGSCWAFSSTGALEGQHFRKTGTLVSLSEQNLVDCSAKYGNNGCNGGLMDNAFRYIKDN 201

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++++YPY+  +    C    ++      + ++ IP G E++M + VAT GP+SV +
Sbjct: 202 GGIDTEKSYPYEGIDDS--CHF-NKDSVGATDRGFADIPQGNEKKMAEAVATIGPVSVAI 258

Query: 434 NAN--GLFYYSGGVIDL----NQRL--------YGT---SIPYWIVKNSWGSDWGEK 473
           +A+     +YS G+ +     +Q L        YGT      YW+VKNSWG+ WG+K
Sbjct: 259 DASHESFQFYSEGIYNEPECNSQNLDHGVLVVGYGTDESGKDYWLVKNSWGTTWGDK 315



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 101/167 (60%), Gaps = 19/167 (11%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           TG L S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+  +  
Sbjct: 163 TGTLVS----LSEQNLVDCSAKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDS 218

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDL 606
             C    ++      + ++ IP G E++M + VAT GP+SV ++A+     +YS G+   
Sbjct: 219 --CHF-NKDSVGATDRGFADIPQGNEKKMAEAVATIGPVSVAIDASHESFQFYSEGI--Y 273

Query: 607 NQRLCNPKAQNHALIIVGYGEEEK-KDGTSIPYWIVKNSWGSDWGEK 652
           N+  CN +  +H +++VGYG +E  KD     YW+VKNSWG+ WG+K
Sbjct: 274 NEPECNSQNLDHGVLVVGYGTDESGKD-----YWLVKNSWGTTWGDK 315



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 16/155 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSDLQQ 104
           F  +H K Y    +   R + F  N  K A+  QR  +G   F+  VNK+ D+   + ++
Sbjct: 30  FKLEHRKTYQDETEERFRLKIFNENKHKIAKHNQRYATGEVTFKMAVNKYADMLHHEFRE 89

Query: 105 -LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            + G N       +   L+A      +D       F S  H   LP++ DWR +G ++ V
Sbjct: 90  TMNGFNYT-----LHKELRA------SDPSFTGITFISPAH-VKLPKSVDWREKGAVTAV 137

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS+ G +E  H  +   L  LS Q
Sbjct: 138 KDQGHCGSCWAFSSTGALEGQHFRKTGTLVSLSEQ 172


>gi|255580657|ref|XP_002531151.1| cysteine protease, putative [Ricinus communis]
 gi|223529264|gb|EEF31236.1| cysteine protease, putative [Ricinus communis]
          Length = 340

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 38/288 (13%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           +VY+   +   R++ F  NV++ E +      +   G+N+F DL+  + +          
Sbjct: 48  RVYNDGNEKEIRYKIFKENVQRIESFNKASGKSYKLGINQFADLTNEEFK---------- 97

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
                 + +  F  +   ++   F++ +L      P + DWR +G ++ +K+QG+C  CW
Sbjct: 98  ------TSRNRFKGHMCSSQAGPFRYENLTAA---PSSMDWRKKGAVTAIKDQGQCGSCW 148

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSD 379
           AFSAV  VE +  +  + L  LS Q+LVDCD    + GC GG MDDA ++I  N G+ ++
Sbjct: 149 AFSAVAAVEGITQLATSKLISLSEQELVDCDTKGEDQGCQGGLMDDAFKFIEQNQGLTTE 208

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
             YPY+ S+    C   +E     K+  +  +P   E  + K VA + P+SV ++A G  
Sbjct: 209 ANYPYEGSDGT--CNTKQEANHAAKINGFEDVPANNEGALMKAVAKQ-PVSVAIDAGGFG 265

Query: 440 --YYSGGVI--DLNQRL--------YGTS--IPYWIVKNSWGSDWGEK 473
             +YS G+   D    L        YG S  + YW+VKNSWG+ WGE+
Sbjct: 266 FQFYSSGIFTGDCGTELDHGVAAVGYGESNGMNYWLVKNSWGTQWGEE 313



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 20/169 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +  SKL  L+ ++LVDCD    + GC GG MDDA ++I  N G+ ++  YPY+ S+ 
Sbjct: 159 ITQLATSKLISLSEQELVDCDTKGEDQGCQGGLMDDAFKFIEQNQGLTTEANYPYEGSDG 218

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVI- 604
              C   +E     K+  +  +P   E  + K VA + P+SV ++A G    +YS G+  
Sbjct: 219 T--CNTKQEANHAAKINGFEDVPANNEGALMKAVAKQ-PVSVAIDAGGFGFQFYSSGIFT 275

Query: 605 -DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            D    L      +H +  VGYGE        + YW+VKNSWG+ WGE+
Sbjct: 276 GDCGTEL------DHGVAAVGYGES-----NGMNYWLVKNSWGTQWGEE 313



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 19/151 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           +M    +VY+   +   R++ F  NV++ E + +    +    +N+F DL++ + +    
Sbjct: 42  WMSRFGRVYNDGNEKEIRYKIFKENVQRIESFNKASGKSYKLGINQFADLTNEEFK---- 97

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                       + +  F  +   ++   F++ +L      P + DWR +G ++ +K+QG
Sbjct: 98  ------------TSRNRFKGHMCSSQAGPFRYENLTAA---PSSMDWRKKGAVTAIKDQG 142

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +C  CWAFSAV  VE +  +  + L  LS Q
Sbjct: 143 QCGSCWAFSAVAAVEGITQLATSKLISLSEQ 173


>gi|94556727|gb|ABF46642.1| papain-like cysteine proteinase [Pachysandra terminalis]
          Length = 374

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 149/302 (49%), Gaps = 53/302 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           K Y+S ++  RR   F  N+ +A+  Q  D  +AV GV +FFDL+ ++ ++ T L L   
Sbjct: 67  KAYTSCDEHDRRFGVFKANLRRAKRNQILDP-SAVHGVTQFFDLTPAEFRR-TYLGLKR- 123

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
                  L+ P  +++            +   +DLP  FDWR  G ++ VK QG C  CW
Sbjct: 124 -------LRLPADTHEA----------PILPTNDLPADFDWRDHGAVTPVKNQGSCGSCW 166

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDALQYIID 372
           +FSA G +E  + +    L  LS QQLVDCD           + GCNGG M  A +Y + 
Sbjct: 167 SFSATGALEGANFLATGKLVSLSEQQLVDCDHVCDSEDPSSCDSGCNGGLMTSAFEYTLK 226

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
            GG+  ++ YPY  ++  + C   ++    V    +S +   +E ++   + T GPL++G
Sbjct: 227 AGGLEREEDYPYTGTDHSK-CKF-DKTKIAVSASNFSVVSL-DENQIAANLVTNGPLAIG 283

Query: 433 MNANGLFYYSGGV---IDLNQRL---------YGTS---------IPYWIVKNSWGSDWG 471
           +NA  +  Y GGV      ++RL         YG++          PYWI+KNSWG  WG
Sbjct: 284 INAMFMQTYIGGVSCPYICSKRLLDHGVLLVGYGSAGFAPIRFKEKPYWIIKNSWGESWG 343

Query: 472 EK 473
           EK
Sbjct: 344 EK 345



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 110/226 (48%), Gaps = 44/226 (19%)

Query: 447 DLNQRLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS-KLSRLAT 503
           D + R +G   P   VKN  S GS W          S + T  LE    L + KL  L+ 
Sbjct: 144 DFDWRDHGAVTP---VKNQGSCGSCW----------SFSATGALEGANFLATGKLVSLSE 190

Query: 504 EKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           ++LVDCD           + GCNGG M  A +Y +  GG+  ++ YPY  ++  + C   
Sbjct: 191 QQLVDCDHVCDSEDPSSCDSGCNGGLMTSAFEYTLKAGGLEREEDYPYTGTDHSK-CKF- 248

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           ++    V    +S +   +E ++   + T GPL++G+NA  +  Y GGV      +C+ +
Sbjct: 249 DKTKIAVSASNFSVVSL-DENQIAANLVTNGPLAIGINAMFMQTYIGGVS--CPYICSKR 305

Query: 615 AQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H +++VGYG         +EK      PYWI+KNSWG  WGEK
Sbjct: 306 LLDHGVLLVGYGSAGFAPIRFKEK------PYWIIKNSWGESWGEK 345



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 20/156 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F +F +   K Y+S ++  RR   F  N+ +A+  Q  D  +AV  V +FFDL+ ++ +
Sbjct: 57  HFSSFKKRFGKAYTSCDEHDRRFGVFKANLRRAKRNQILDP-SAVHGVTQFFDLTPAEFR 115

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           + T L L          L+ P  +++            +   +DLP  FDWR  G ++ V
Sbjct: 116 R-TYLGLKR--------LRLPADTHEA----------PILPTNDLPADFDWRDHGAVTPV 156

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CW+FSA G +E  + +    L  LS Q 
Sbjct: 157 KNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQ 192


>gi|46401612|dbj|BAD16614.1| cysteine proteinase [Dianthus caryophyllus]
          Length = 459

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 163/329 (49%), Gaps = 42/329 (12%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           +L E  +  H K Y+ + +   R   F  N+   ++  SE+    + G+N+F DL+  + 
Sbjct: 41  SLYETWLVKHGKNYNGLGEKQLRFNIFKDNLRFVDERNSENLSFKL-GLNRFADLTNEEY 99

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +        S     +P   A   S ++ ++  AF     R GD LPE+ DWR +G ++ 
Sbjct: 100 R--------SVYLGTRPRSVAVARSGRSKSDRYAF-----RAGDTLPESVDWRKKGAVAG 146

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           +K+QG C  CWAFSA+  VE ++ I    L  LS Q+LV+CD S N GC+GG MD A ++
Sbjct: 147 IKDQGSCGSCWAFSAIAAVEGVNQIVTGDLISLSEQELVECDTSYNDGCDGGLMDYAFEF 206

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           II N G+ SD+ YPY   +    C    +    V + +Y   P  +E+ ++K VA + P+
Sbjct: 207 IIKNEGIDSDEDYPYTGRDGR--CDTNRKNAKVVTIDDYEDSPVYDEKSLQKAVANQ-PV 263

Query: 430 SVGMNANGLFY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGEKVE 475
           SV +   G  +  Y  GV        L+  +    YGT   + YWIV+NSWG  WGE   
Sbjct: 264 SVAIEGGGRDFQLYDSGVFTGKCGTALDHGVAVVGYGTEDGLDYWIVRNSWGDTWGE--- 320

Query: 476 DKVGSSGNRTRDLELTGVLPSKLSRLATE 504
                 G   R ++    LPS +  +A E
Sbjct: 321 ------GGYIR-MQRNTKLPSGICGIAIE 342



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LV+CD S N GC+GG MD A ++II N G+ SD+ YPY   +    C
Sbjct: 171 IVTGDLISLSEQELVECDTSYNDGCDGGLMDYAFEFIIKNEGIDSDEDYPYTGRDGR--C 228

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V + +Y   P  +E+ ++K VA + P+SV +   G  +  Y  GV      
Sbjct: 229 DTNRKNAKVVTIDDYEDSPVYDEKSLQKAVANQ-PVSVAIEGGGRDFQLYDSGVF---TG 284

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C   A +H + +VGYG E+  D     YWIV+NSWG  WGE
Sbjct: 285 KCG-TALDHGVAVVGYGTEDGLD-----YWIVRNSWGDTWGE 320



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 20/194 (10%)

Query: 20  FMIKVALLESNIFQTRGYLNSP----VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           F++  + L+ +I       N P     + +  ++  H K Y+ + +   R   F  N+  
Sbjct: 16  FIVSSSALDLSIIDRA--FNRPDDEIASLYETWLVKHGKNYNGLGEKQLRFNIFKDNLRF 73

Query: 76  AEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMR 135
            ++   E+    +  +N+F DL++ + +        S     +P   A   S ++ ++  
Sbjct: 74  VDERNSENLSFKL-GLNRFADLTNEEYR--------SVYLGTRPRSVAVARSGRSKSDRY 124

Query: 136 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTEL 195
           AF     R GD LPE+ DWR +G ++ +K+QG C  CWAFSA+  VE ++ I   +L  L
Sbjct: 125 AF-----RAGDTLPESVDWRKKGAVAGIKDQGSCGSCWAFSAIAAVEGVNQIVTGDLISL 179

Query: 196 SVQHHDKVYSSVED 209
           S Q   +  +S  D
Sbjct: 180 SEQELVECDTSYND 193


>gi|1401242|gb|AAB67878.1| pre-pro-cysteine proteinase [Vicia faba]
          Length = 363

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 149/317 (47%), Gaps = 61/317 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K YS+ E+   R   F +N+ KA+ +Q  D  TA  G+ KF DL+
Sbjct: 42  LNAEHHFTSFKSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDP-TAEHGITKFSDLT 100

Query: 247 ESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 306
            S+ ++   L L   L     + +AP                      +LPE FDWR +G
Sbjct: 101 ASEFRR-QFLGLKKRLRLPAHAQKAPILPTT-----------------NLPEDFDWREKG 142

Query: 307 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGG 357
            ++ VK+QG C  CWAFS  G +E  H +    L  LS QQLVDCD           + G
Sbjct: 143 AVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSG 202

Query: 358 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 417
           CNGG M++A +Y++ +GGVV ++ Y Y   +   G    ++      V  +S +   +EE
Sbjct: 203 CNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD---GSCKFDKSKVVASVSNFSVVSL-DEE 258

Query: 418 EMKKWVATRGPLSVGMNANGLFYYSGGV----------IDLNQRLYG-----------TS 456
           ++   +   GPL+VG+NA  +  Y  GV          +D    L G             
Sbjct: 259 QIAANLVKNGPLAVGINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKE 318

Query: 457 IPYWIVKNSWGSDWGEK 473
            PYWIVKNSWG +WGE+
Sbjct: 319 KPYWIVKNSWGQNWGEQ 335



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 108/212 (50%), Gaps = 41/212 (19%)

Query: 469 DWGEK-----VEDKVGSSGN-----RTRDLELTGVLPS-KLSRLATEKLVDCDM------ 511
           DW EK     V+D+ GS G+      T  LE    L + KL  L+ ++LVDCD       
Sbjct: 137 DWREKGAVTPVKDQ-GSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQ 195

Query: 512 ---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 568
               + GCNGG M++A +Y++ +GGVV ++ Y Y   +   G    ++      V  +S 
Sbjct: 196 AGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD---GSCKFDKSKVVASVSNFSV 252

Query: 569 IPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE- 627
           +   +EE++   +   GPL+VG+NA  +  Y  GV      +C     +H +++VG+G+ 
Sbjct: 253 VSL-DEEQIAANLVKNGPLAVGINAAWMQTYMSGVS--CPYVCAKSRLDHGVLLVGFGKG 309

Query: 628 -------EEKKDGTSIPYWIVKNSWGSDWGEK 652
                  +EK      PYWIVKNSWG +WGE+
Sbjct: 310 AYAPIRLKEK------PYWIVKNSWGQNWGEQ 335



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 19/156 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F +F     K YS+ E+   R   F +N+ KA+ +Q+ D  TA   + KF DL+ S+ +
Sbjct: 47  HFTSFKSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDP-TAEHGITKFSDLTASEFR 105

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +   L L   L     + +AP                      +LPE FDWR +G ++ V
Sbjct: 106 R-QFLGLKKRLRLPAHAQKAPILPTT-----------------NLPEDFDWREKGAVTPV 147

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG C  CWAFS  G +E  H +    L  LS Q 
Sbjct: 148 KDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQ 183


>gi|15984|emb|CAA34486.1| unnamed protein product [Actinidia deliciosa]
          Length = 380

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 41/303 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + K Y+S+ +  RR E F   +   +++ ++ + +   G+N+F DL++ + +  T L   
Sbjct: 49  YGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRS-TYLGFT 107

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S              SN+T    R       R G  LP   DWR+ G +  +K QG+C  
Sbjct: 108 S-------------GSNKTKVSNRY----EPRFGQVLPSYVDWRSAGAVVDIKSQGECGG 150

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDNGGVV 377
           CWAFSA+  VE ++ I    L  LS Q+L+DC  +    GCNGG + D  Q+II+NGG+ 
Sbjct: 151 CWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGIN 210

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +++ YPY A + E  C +  +    V +  Y  +PY  E  ++  V T  P+SV ++A G
Sbjct: 211 TEENYPYTAQDGE--CNLDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAG 267

Query: 438 --LFYYSGGV--------IDLNQRL--YGT--SIPYWIVKNSWGSDWGE----KVEDKVG 479
               +YS G+        ID    +  YGT   I YWIVKNSW + WGE    ++   VG
Sbjct: 268 DAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVG 327

Query: 480 SSG 482
            +G
Sbjct: 328 GAG 330



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 93/167 (55%), Gaps = 20/167 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +TGVL S    L+ ++L+DC  +    GCNGG + D  Q+II+NGG+ +++ YPY A + 
Sbjct: 167 VTGVLIS----LSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDG 222

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
           E  C +  +    V +  Y  +PY  E  ++  V T  P+SV ++A G    +YS G+  
Sbjct: 223 E--CNLDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKHYSSGIF- 278

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C   A +HA+ IVGYG E       I YWIVKNSW + WGE+
Sbjct: 279 --TGPCG-TAIDHAVTIVGYGTE-----GGIDYWIVKNSWDTTWGEE 317



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 18/152 (11%)

Query: 47  NFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLT 106
           +++  + K Y+S+ +  RR E F   +   +++  + + +    +N+F DL+D + +  T
Sbjct: 44  SWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRS-T 102

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
            L   S              SN+T    R       R G  LP   DWR+ G +  +K Q
Sbjct: 103 YLGFTS-------------GSNKTKVSNRY----EPRFGQVLPSYVDWRSAGAVVDIKSQ 145

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G+C  CWAFSA+  VE ++ I    L  LS Q
Sbjct: 146 GECGGCWAFSAIATVEGINKIVTGVLISLSEQ 177


>gi|343477619|emb|CCD11596.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 158/318 (49%), Gaps = 35/318 (11%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  ++E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRMFKQSMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +  T LN     +    +L+ P       T         
Sbjct: 77  AANPYATFGVTQFSDMSPEEFRA-TYLN---GAKYYAAALKRPRKVVTVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  P A DWR +G ++ VK+Q KC  CWAFSA+G +E    + G+ LT LS Q LV
Sbjct: 124 ----GKAPPAIDWRKKGAVTPVKDQRKCGSCWAFSAIGNIEGQWKVAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD  + GC GG MD AL++I+  + G V ++++YPY +++ +        +    K+  
Sbjct: 180 SCDNMDDGCQGGLMDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPCNKSGKVVGAKISG 239

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRLY------GT 455
              +P  +E  + +W+A  GP+++ ++A+    Y+GGV+       LN  +        +
Sbjct: 240 LINLP-KDENAIAEWLAKNGPIAIAVDASSFLDYTGGVLTSCSSDALNHDVLLVGYDDSS 298

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSWG  WGE+
Sbjct: 299 KPPYWIIKNSWGKKWGEE 316



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 91/158 (57%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVG 554
           +L+ L+ + LV CD  + GC GG MD AL++I+  + G V ++++YPY +++ +      
Sbjct: 169 ELTSLSEQMLVSCDNMDDGCQGGLMDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPCNK 228

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
             +    K+     +P  +E  + +W+A  GP+++ ++A+    Y+GGV+      C+  
Sbjct: 229 SGKVVGAKISGLINLP-KDENAIAEWLAKNGPIAIAVDASSFLDYTGGVLTS----CSSD 283

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A NH +++VGY +  K      PYWI+KNSWG  WGE+
Sbjct: 284 ALNHDVLLVGYDDSSKP-----PYWIIKNSWGKKWGEE 316



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  ++E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKE-EAAANPYATFGVTQFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             T LN     +    +L+ P       T                P A DWR +G ++ V
Sbjct: 99  A-TYLN---GAKYYAAALKRPRKVVTVST-------------GKAPPAIDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+Q KC  CWAFSA+G +E    + G+ LT LS Q
Sbjct: 142 KDQRKCGSCWAFSAIGNIEGQWKVAGHELTSLSEQ 176


>gi|356515080|ref|XP_003526229.1| PREDICTED: vignain-like [Glycine max]
          Length = 284

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 135/271 (49%), Gaps = 37/271 (13%)

Query: 220 NVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTD 279
           NV   E + +  +     G+N+F DL+  +               I P  +       ++
Sbjct: 7   NVNYIEAFNNAANKPYKLGINQFADLTSEEF--------------IVPRNRFNGHMRFSN 52

Query: 280 TEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNS 339
           T    F++ ++     LP++ DWR +G ++ +K QG C CCWAFSA+   E +H I    
Sbjct: 53  TRTTTFKYENVT---VLPDSIDWRQKGAVTPIKNQGSCGCCWAFSAIAATEGIHKISTGK 109

Query: 340 LTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 397
           L  LS Q++VDCD   ++ GC GG MD A ++II N G+ ++ +YPYK  + +  C + E
Sbjct: 110 LVSLSEQEVVDCDTKGTDHGCEGGYMDGAFKFIIQNHGINTEASYPYKGVDGK--CNIKE 167

Query: 398 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSG----------- 443
           E      +  Y  +P   E+ ++K VA + P+SV ++A G    FY SG           
Sbjct: 168 EAVHATTITGYEDVPINNEKALQKAVANQ-PVSVAIDARGADFQFYKSGIFTGSCGTELD 226

Query: 444 -GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
            GV  +          YW+VKNSWG++WGE+
Sbjct: 227 HGVTAVGYGENNEGTKYWLVKNSWGTEWGEE 257



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 17/161 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ +++VDCD   ++ GC GG MD A ++II N G+ ++ +YPYK  + +  C + 
Sbjct: 109 KLVSLSEQEVVDCDTKGTDHGCEGGYMDGAFKFIIQNHGINTEASYPYKGVDGK--CNIK 166

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLNQRLC 611
           EE      +  Y  +P   E+ ++K VA + P+SV ++A G    FY SG    +    C
Sbjct: 167 EEAVHATTITGYEDVPINNEKALQKAVANQ-PVSVAIDARGADFQFYKSG----IFTGSC 221

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +  +H +  VGYG  E  +GT   YW+VKNSWG++WGE+
Sbjct: 222 GTEL-DHGVTAVGYG--ENNEGTK--YWLVKNSWGTEWGEE 257



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)

Query: 130 TDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
           ++T    F++ ++     LP++ DWR +G ++ +K QG C CCWAFSA+   E +H I  
Sbjct: 51  SNTRTTTFKYENVT---VLPDSIDWRQKGAVTPIKNQGSCGCCWAFSAIAATEGIHKIST 107

Query: 190 NNLTELSVQ 198
             L  LS Q
Sbjct: 108 GKLVSLSEQ 116


>gi|2511693|emb|CAB17076.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 455

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 162/314 (51%), Gaps = 44/314 (14%)

Query: 190 NNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD 249
           N+L E  +  H K+Y+++ +  +R + F  N+ +  D Q+ ++ T   G+N+F DL+  +
Sbjct: 37  NSLYEEWLVKHGKLYNALGEKDKRFQIFKDNL-RFIDQQNAENRTYKLGLNRFADLTNEE 95

Query: 250 LQQL---TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 306
            +     T ++ +  L     +  AP                  R G+ LP++ DWR EG
Sbjct: 96  YRARYLGTKIDPNRRLGRTPSNRYAP------------------RVGETLPDSVDWRKEG 137

Query: 307 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDD 365
            +  VK+Q  C  CWAFSA+G VE ++ I    L  LS Q+LVDCD   N GCNGG MD 
Sbjct: 138 AVVPVKDQASCGSCWAFSAIGAVEGINKIVTGDLISLSEQELVDCDTGYNMGCNGGLMDY 197

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
           A ++II NGG+ S++ YPYK  +    C    +    V +  Y  +   +E  +KK VA 
Sbjct: 198 AFEFIIKNGGIDSEEDYPYKGVDGR--CDEYRKNAKVVSIDGYEDVNTYDELALKKAVAN 255

Query: 426 RGPLSVGMNANGLFY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWG 471
           + P+SV +   G  +  YS GV        L+  +    YGT     +WIV+NSWG+DWG
Sbjct: 256 Q-PVSVAVEGGGREFQLYSSGVFTGRCGTALDHGVVAVGYGTDNGHDFWIVRNSWGADWG 314

Query: 472 E----KVEDKVGSS 481
           E    ++E  +G+S
Sbjct: 315 EEGYIRLERNLGNS 328



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 90/166 (54%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD   N GCNGG MD A ++II NGG+ S++ YPYK  +  
Sbjct: 163 INKIVTGDLISLSEQELVDCDTGYNMGCNGGLMDYAFEFIIKNGGIDSEEDYPYKGVDGR 222

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +   +E  +KK VA + P+SV +   G  +  YS GV   
Sbjct: 223 --CDEYRKNAKVVSIDGYEDVNTYDELALKKAVANQ-PVSVAVEGGGREFQLYSSGVF-- 277

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C   A +H ++ VGYG +   D     +WIV+NSWG+DWGE+
Sbjct: 278 -TGRCG-TALDHGVVAVGYGTDNGHD-----FWIVRNSWGADWGEE 316



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 22/154 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL-- 105
           ++  H K+Y+++ +  +R + F  N+ +  D Q  ++ T    +N+F DL++ + +    
Sbjct: 43  WLVKHGKLYNALGEKDKRFQIFKDNL-RFIDQQNAENRTYKLGLNRFADLTNEEYRARYL 101

Query: 106 -TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            T ++ +  L     +  AP                  R G+ LP++ DWR EG +  VK
Sbjct: 102 GTKIDPNRRLGRTPSNRYAP------------------RVGETLPDSVDWRKEGAVVPVK 143

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +Q  C  CWAFSA+G VE ++ I   +L  LS Q
Sbjct: 144 DQASCGSCWAFSAIGAVEGINKIVTGDLISLSEQ 177


>gi|348531585|ref|XP_003453289.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 366

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 127/255 (49%), Gaps = 35/255 (13%)

Query: 237 FGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL 296
            G+  F D+   + +QL                Q+   S       R   F  L  G DL
Sbjct: 105 LGMTHFADMEHEEYKQLIS--------------QSFLGSFNASLPQRGSAFFRLPEGTDL 150

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-- 354
           P+  DWR +G +++VK+Q  C  CWAFS  GV+E  H  +   L  LS QQL+DC  S  
Sbjct: 151 PDTVDWRDKGYVTEVKDQKICGSCWAFSTTGVLEGQHFRKTGKLVSLSEQQLMDCSHSFG 210

Query: 355 NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           N GCNGG +  A QYI  NGG+ ++ +YPY+A   +  C   + +G   K   Y  +   
Sbjct: 211 NNGCNGGSVKRAFQYIQANGGIDTEASYPYEAKGQQ--CRY-KPDGIGAKCTGYVEVKPS 267

Query: 415 EEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVID--------LNQRL----YGT--SIP 458
            E+ +K+ VAT GP+SVG++A  N   +Y  GV D        LN  +    YGT     
Sbjct: 268 NEDALKEAVATIGPISVGIDASHNSFRFYQSGVYDEPDCSKTVLNHDVLAVGYGTENGHD 327

Query: 459 YWIVKNSWGSDWGEK 473
           YW++KNSWG  WG+K
Sbjct: 328 YWLIKNSWGIRWGDK 342



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 91/160 (56%), Gaps = 14/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++L+DC  S  N GCNGG +  A QYI  NGG+ ++ +YPY+A   +  C   
Sbjct: 193 KLVSLSEQQLMDCSHSFGNNGCNGGSVKRAFQYIQANGGIDTEASYPYEAKGQQ--CRY- 249

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
           + +G   K   Y  +    E+ +K+ VAT GP+SVG++A  N   +Y  GV D  +  C+
Sbjct: 250 KPDGIGAKCTGYVEVKPSNEDALKEAVATIGPISVGIDASHNSFRFYQSGVYD--EPDCS 307

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               NH ++ VGYG E   D     YW++KNSWG  WG+K
Sbjct: 308 KTVLNHDVLAVGYGTENGHD-----YWLIKNSWGIRWGDK 342



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 39/77 (50%)

Query: 122 QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 181
           Q+   S       R   F  L  G DLP+  DWR +G +++VK+Q  C  CWAFS  GV+
Sbjct: 124 QSFLGSFNASLPQRGSAFFRLPEGTDLPDTVDWRDKGYVTEVKDQKICGSCWAFSTTGVL 183

Query: 182 EAMHAIQGNNLTELSVQ 198
           E  H  +   L  LS Q
Sbjct: 184 EGQHFRKTGKLVSLSEQ 200


>gi|449460678|ref|XP_004148072.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Cucumis
           sativus]
          Length = 317

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 153/291 (52%), Gaps = 46/291 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y S E+  RR   +  NV+  +++ S         +N    L+E++   LT     
Sbjct: 26  YGRQYKSREEWERRFTIYQANVQYIDNFNS---------MNHSHTLAENNFADLTNEEFK 76

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQGKC 317
           +T    + ++  P      DT          R+G+  +LP   DWR EG ++ +K QG+C
Sbjct: 77  ATYLGYK-TVSIP------DT--------CFRYGNMVNLPTNVDWRQEGAVTPIKNQGQC 121

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDNGG 375
             CWAFSAV  VE ++ I+   L  LS Q+LVDCD+++G  GCNGG M  A ++ I   G
Sbjct: 122 GSCWAFSAVAAVEGINKIKAGKLISLSEQELVDCDVTSGNQGCNGGYMYKAFEF-IKRTG 180

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPY+ +ES   C   +E+   V +  Y ++P  +E+ +K  VA + P+SV ++A
Sbjct: 181 LTTEIEYPYQGAES--ACNEQKEKYQFVSISGYEKVPVNDEKSLKAAVANQ-PVSVAIDA 237

Query: 436 --NGLFYYSGGVID---LNQRLYGTSI---------PYWIVKNSWGSDWGE 472
             N   +YSGG+      NQ  +G +I          YW+VKNSWG+DWGE
Sbjct: 238 EGNNFQFYSGGIFSGNCGNQLNHGVAIVGYGETSNQAYWLVKNSWGTDWGE 288



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 17/166 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  +   KL  L+ ++LVDCD+++G  GCNGG M  A ++I    G+ ++  YPY+ +ES
Sbjct: 136 INKIKAGKLISLSEQELVDCDVTSGNQGCNGGYMYKAFEFI-KRTGLTTEIEYPYQGAES 194

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVID 605
              C   +E+   V +  Y ++P  +E+ +K  VA + P+SV ++A  N   +YSGG+  
Sbjct: 195 --ACNEQKEKYQFVSISGYEKVPVNDEKSLKAAVANQ-PVSVAIDAEGNNFQFYSGGIFS 251

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            N   C  +  NH + IVGYGE   +      YW+VKNSWG+DWGE
Sbjct: 252 GN---CGNQL-NHGVAIVGYGETSNQ-----AYWLVKNSWGTDWGE 288



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 26/157 (16%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R+  +M  + + Y S E+  RR   +  NV+  +++   +    + E N F DL++    
Sbjct: 18  RYQKWMDKYGRQYKSREEWERRFTIYQANVQYIDNFNSMNHSHTLAE-NNFADLTN---- 72

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVIS 161
                      E+ + +     + +  DT          R+G+  +LP   DWR EG ++
Sbjct: 73  -----------EEFKATYLGYKTVSIPDT--------CFRYGNMVNLPTNVDWRQEGAVT 113

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +K QG+C  CWAFSAV  VE ++ I+   L  LS Q
Sbjct: 114 PIKNQGQCGSCWAFSAVAAVEGINKIKAGKLISLSEQ 150


>gi|7242888|dbj|BAA92495.1| cysteine protease [Vigna mungo]
          Length = 364

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 148/316 (46%), Gaps = 63/316 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R   F +N+ +A  +   D  +AV GV KF DL+
Sbjct: 44  LNAEHHFSNFKAKFGKTYATKEEHDHRFGVFKSNLRRARLHAQLDP-SAVHGVTKFSDLT 102

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
            ++ Q Q  GL       + Q +   P                     ++LP+ FDWR +
Sbjct: 103 AAEFQRQFLGLKPLGLPANAQKAPILP--------------------TNNLPKDFDWRDK 142

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNG 356
           G ++ VK+QG C  CW+FS  G +E  H +    L  LS QQLVDCD           + 
Sbjct: 143 GAVTNVKDQGACGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGACDS 202

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M++A +YI+  GGV  ++ YPY   +S   C   ++      V  YS I   +E
Sbjct: 203 GCNGGLMNNAFEYILGAGGVQREEDYPYAGRDSS--CKF-DKSKIAASVANYSVISL-DE 258

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV----IDLNQRLYGTSI--------------- 457
           +++   +   GPL+VG+NA  +  Y GGV    I   +  +G  I               
Sbjct: 259 DQIAANLVKNGPLAVGINAVYMQTYIGGVSCPYICAKRLDHGVQIVGYGESGYAPIRFKE 318

Query: 458 -PYWIVKNSWGSDWGE 472
            PYWI+KNSWG  WGE
Sbjct: 319 KPYWIIKNSWGESWGE 334



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 87/166 (52%), Gaps = 18/166 (10%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M++A +YI+  GGV  ++ YPY   +S
Sbjct: 176 ELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILGAGGVQREEDYPYAGRDS 235

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
              C   ++      V  YS I   +E+++   +   GPL+VG+NA  +  Y GGV    
Sbjct: 236 S--CKF-DKSKIAASVANYSVISL-DEDQIAANLVKNGPLAVGINAVYMQTYIGGVS--C 289

Query: 608 QRLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGE 651
             +C  K  +H + IVGYGE           PYWI+KNSWG  WGE
Sbjct: 290 PYIC-AKRLDHGVQIVGYGESGYAPIRFKEKPYWIIKNSWGESWGE 334



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 22/156 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F NF     K Y++ E+   R   F +N+ +A  + + D  +AV  V KF DL+ ++ Q
Sbjct: 49  HFSNFKAKFGKTYATKEEHDHRFGVFKSNLRRARLHAQLDP-SAVHGVTKFSDLTAAEFQ 107

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  GL       + Q +   P                     ++LP+ FDWR +G ++ 
Sbjct: 108 RQFLGLKPLGLPANAQKAPILP--------------------TNNLPKDFDWRDKGAVTN 147

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG C  CW+FS  G +E  H +    L  LS Q
Sbjct: 148 VKDQGACGSCWSFSTTGALEGAHFLATGELVSLSEQ 183


>gi|332375975|gb|AEE63128.1| unknown [Dendroctonus ponderosae]
          Length = 338

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 113/204 (55%), Gaps = 37/204 (18%)

Query: 295 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD-- 352
           D+P+  DWR EG ++ VK+QG C  CW+FSA G +E  H  Q   L  LS Q LVDC   
Sbjct: 119 DIPDTVDWRQEGAVTPVKDQGHCGSCWSFSATGALEGQHFRQTKKLVSLSEQNLVDCSSR 178

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE----- 407
             N GCNGG MD+A +YI +NGG+ ++ AYPY          +GE+E F+   K      
Sbjct: 179 FGNNGCNGGLMDNAFRYIKNNGGIDTEAAYPY----------MGEDEKFRYSAKNRGATD 228

Query: 408 --YSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV--------IDLNQRL--- 452
             +  IP G+E+++K  VAT GP+S+ ++A+      YS GV         +L+  +   
Sbjct: 229 KGFVDIPSGDEDKLKAAVATVGPISIAIDASHESFQLYSNGVYSDPTCSSTELDHGVLVV 288

Query: 453 -YG----TSIPYWIVKNSWGSDWG 471
            YG    T + YW+VKNSWG  WG
Sbjct: 289 GYGTDEKTGMDYWLVKNSWGDTWG 312



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 95/165 (57%), Gaps = 26/165 (15%)

Query: 497 KLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD+A +YI +NGG+ ++ AYPY          +G
Sbjct: 163 KLVSLSEQNLVDCSSRFGNNGCNGGLMDNAFRYIKNNGGIDTEAAYPY----------MG 212

Query: 555 EEEGFKVKVKE-------YSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVID 605
           E+E F+   K        +  IP G+E+++K  VAT GP+S+ ++A+      YS GV  
Sbjct: 213 EDEKFRYSAKNRGATDKGFVDIPSGDEDKLKAAVATVGPISIAIDASHESFQLYSNGV-- 270

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
            +   C+    +H +++VGYG +EK   T + YW+VKNSWG  WG
Sbjct: 271 YSDPTCSSTELDHGVLVVGYGTDEK---TGMDYWLVKNSWGDTWG 312



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 33/53 (62%)

Query: 147 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           D+P+  DWR EG ++ VK+QG C  CW+FSA G +E  H  Q   L  LS Q+
Sbjct: 119 DIPDTVDWRQEGAVTPVKDQGHCGSCWSFSATGALEGQHFRQTKKLVSLSEQN 171


>gi|410914437|ref|XP_003970694.1| PREDICTED: cathepsin O-like [Takifugu rubripes]
          Length = 328

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 139/269 (51%), Gaps = 42/269 (15%)

Query: 229 SEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN 288
           S  S +A +G+N+F DLS+ + Q L    L ++ +      +AP  S Q           
Sbjct: 71  SAASQSAKYGINQFSDLSQREFQDLY---LRASAD------RAPAFSGQK---------- 111

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
                + LP  FDWR   +++ V+ Q  C  CWAFS VG V+++HAI G+ L ELSVQQ+
Sbjct: 112 ----AEGLPAKFDWRDHAIVAPVQNQQACGSCWAFSVVGAVQSVHAIGGSQLVELSVQQV 167

Query: 349 VDCDMSNGGCNGGRMDDALQYIIDNG-GVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
           +DC   N GCNGG    AL+++      +V    YPYKA         G   G  V VK 
Sbjct: 168 LDCSFQNKGCNGGTPVAALKWLTQTRVKLVPQSEYPYKAQTRMCHFFSGSHGG--VGVKN 225

Query: 408 YSRIPY-GEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDL-------NQRL----YGT 455
           ++ + + G+EE M   +   GPLSV ++A     Y GG+I         N  +    Y T
Sbjct: 226 FTALDFSGQEEAMMGHLVKHGPLSVVVDALSWQDYLGGIIQYHCSSKRSNHAVLVVGYDT 285

Query: 456 S--IPYWIVKNSWGSDWGEK--VEDKVGS 480
           +  IPYWIV+NSWG+ WG+K  V  KVGS
Sbjct: 286 TGDIPYWIVQNSWGTTWGDKGYVYMKVGS 314



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNG-GVVSDQAYPYKASESERGCLVG 554
           S+L  L+ ++++DC   N GCNGG    AL+++      +V    YPYKA         G
Sbjct: 157 SQLVELSVQQVLDCSFQNKGCNGGTPVAALKWLTQTRVKLVPQSEYPYKAQTRMCHFFSG 216

Query: 555 EEEGFKVKVKEYSRIPY-GEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
              G  V VK ++ + + G+EE M   +   GPLSV ++A     Y GG+I   Q  C+ 
Sbjct: 217 SHGG--VGVKNFTALDFSGQEEAMMGHLVKHGPLSVVVDALSWQDYLGGII---QYHCSS 271

Query: 614 KAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
           K  NHA+++VGY      D T  IPYWIV+NSWG+ WG+K
Sbjct: 272 KRSNHAVLVVGY------DTTGDIPYWIVQNSWGTTWGDK 305



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 23/116 (19%)

Query: 84  SGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 143
           S +A + +N+F DLS  + Q L    L ++ +      +AP  S Q              
Sbjct: 74  SQSAKYGINQFSDLSQREFQDLY---LRASAD------RAPAFSGQK------------- 111

Query: 144 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
             + LP  FDWR   +++ V+ Q  C  CWAFS VG V+++HAI G+ L ELSVQ 
Sbjct: 112 -AEGLPAKFDWRDHAIVAPVQNQQACGSCWAFSVVGAVQSVHAIGGSQLVELSVQQ 166


>gi|225431287|ref|XP_002275759.1| PREDICTED: cysteine proteinase RD19a isoform 1 [Vitis vinifera]
 gi|297735094|emb|CBI17456.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 144/301 (47%), Gaps = 54/301 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTGLNLDS 260
           K YS+VE+   R   F  N+ +A  +Q  D  +AV GV +F DL+  + ++   GL    
Sbjct: 61  KTYSTVEEHDYRFSVFEANLRRARRHQLLDP-SAVHGVTRFSDLTPDEFRRDYLGLKPLR 119

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACC 320
              D Q   +AP                     +DLP  FDWR  G ++ VK+QG C  C
Sbjct: 120 LPADAQ---KAPILPT-----------------NDLPTDFDWRDHGAVTPVKDQGSCGSC 159

Query: 321 WAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNGGCNGGRMDDALQYII 371
           W+FSA+G +E  H +   +L  +S QQLVDCD           + GCNGG M  A +YI+
Sbjct: 160 WSFSAIGALEGAHFLTTGNLISMSEQQLVDCDHECDPEEYGACDQGCNGGLMTSAFEYIL 219

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
             GGV  ++ YPY    S+RG     +      V  +S +   +E+++   +   GPL+V
Sbjct: 220 KAGGVEREETYPYIG--SDRGSCKFNKSQIVASVSNFSVVSL-DEDQIAANMVKNGPLAV 276

Query: 432 GMNANGLFYYSGGV---------IDLNQRL--YGTS---------IPYWIVKNSWGSDWG 471
           G+NA  +  Y  GV         +D    L  YG++          PYWI+KNSWG  WG
Sbjct: 277 GINAVFMQTYMKGVSCPYICSRNLDHGVVLVGYGSAGYAPIRFKEKPYWIIKNSWGESWG 336

Query: 472 E 472
           E
Sbjct: 337 E 337



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 29/171 (16%)

Query: 498 LSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           L  ++ ++LVDCD           + GCNGG M  A +YI+  GGV  ++ YPY    S+
Sbjct: 179 LISMSEQQLVDCDHECDPEEYGACDQGCNGGLMTSAFEYILKAGGVEREETYPYIG--SD 236

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
           RG     +      V  +S +   +E+++   +   GPL+VG+NA  +  Y  GV     
Sbjct: 237 RGSCKFNKSQIVASVSNFSVVSL-DEDQIAANMVKNGPLAVGINAVFMQTYMKGVS--CP 293

Query: 609 RLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
            +C+ +  +H +++VGYG         +EK      PYWI+KNSWG  WGE
Sbjct: 294 YICS-RNLDHGVVLVGYGSAGYAPIRFKEK------PYWIIKNSWGESWGE 337



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 22/157 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F     K YS+VE+   R   F  N+ +A  +Q  D  +AV  V +F DL+  + +
Sbjct: 51  QFGLFKAKFGKTYSTVEEHDYRFSVFEANLRRARRHQLLDP-SAVHGVTRFSDLTPDEFR 109

Query: 104 Q-LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +   GL       D Q   +AP                     +DLP  FDWR  G ++ 
Sbjct: 110 RDYLGLKPLRLPADAQ---KAPILPT-----------------NDLPTDFDWRDHGAVTP 149

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK+QG C  CW+FSA+G +E  H +   NL  +S Q 
Sbjct: 150 VKDQGSCGSCWSFSAIGALEGAHFLTTGNLISMSEQQ 186


>gi|27413319|gb|AAO11786.1| pre-pro cysteine proteinase [Vicia faba]
          Length = 363

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 149/317 (47%), Gaps = 61/317 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K YS+ E+   R   F +N+ KA+ +Q  D  TA  G+ KF DL+
Sbjct: 42  LNAEHHFTSFKSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDP-TAEHGITKFSDLT 100

Query: 247 ESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 306
            S+ ++   L L   L     + +AP                      +LPE FDWR +G
Sbjct: 101 ASEFRR-QFLGLKKRLRLPAHAQKAPILPTT-----------------NLPEDFDWREKG 142

Query: 307 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGG 357
            ++ VK+QG C  CWAFS  G +E  H +    L  LS QQLVDCD           + G
Sbjct: 143 AVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSG 202

Query: 358 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 417
           CNGG M++A +Y++ +GGVV ++ Y Y   +   G    ++      V  +S +   +EE
Sbjct: 203 CNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD---GSCKFDKSKVVASVSNFSVVSL-DEE 258

Query: 418 EMKKWVATRGPLSVGMNANGLFYYSGGV----------IDLNQRLYG-----------TS 456
           ++   +   GPL+VG+NA  +  Y  GV          +D    L G             
Sbjct: 259 QIAANLVKNGPLAVGINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKE 318

Query: 457 IPYWIVKNSWGSDWGEK 473
            PYWIVKNSWG +WGE+
Sbjct: 319 KPYWIVKNSWGQNWGEQ 335



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 108/212 (50%), Gaps = 41/212 (19%)

Query: 469 DWGEK-----VEDKVGSSGN-----RTRDLELTGVLPS-KLSRLATEKLVDCDM------ 511
           DW EK     V+D+ GS G+      T  LE    L + KL  L+ ++LVDCD       
Sbjct: 137 DWREKGAVTPVKDQ-GSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQ 195

Query: 512 ---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 568
               + GCNGG M++A +Y++ +GGVV ++ Y Y   +   G    ++      V  +S 
Sbjct: 196 AGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD---GSCKFDKSKVVASVSNFSV 252

Query: 569 IPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE- 627
           +   +EE++   +   GPL+VG+NA  +  Y  GV      +C     +H +++VG+G+ 
Sbjct: 253 VSL-DEEQIAANLVKNGPLAVGINAAWMQTYMSGVS--CPYVCAKSRLDHGVLLVGFGKG 309

Query: 628 -------EEKKDGTSIPYWIVKNSWGSDWGEK 652
                  +EK      PYWIVKNSWG +WGE+
Sbjct: 310 AYAPIRLKEK------PYWIVKNSWGQNWGEQ 335



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 19/156 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F +F     K YS+ E+   R   F +N+ KA+ +Q+ D  TA   + KF DL+ S+ +
Sbjct: 47  HFTSFKSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDP-TAEHGITKFSDLTASEFR 105

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +   L L   L     + +AP                      +LPE FDWR +G ++ V
Sbjct: 106 R-QFLGLKKRLRLPAHAQKAPILPTT-----------------NLPEDFDWREKGAVTPV 147

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG C  CWAFS  G +E  H +    L  LS Q 
Sbjct: 148 KDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQ 183


>gi|118481169|gb|ABK92536.1| unknown [Populus trichocarpa]
          Length = 368

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 154/331 (46%), Gaps = 64/331 (19%)

Query: 180 VVEAMHAIQGNNLTELSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSED 231
           VVE       N LT  + QHH         K Y S E+   R   F +N+ +A  +Q  D
Sbjct: 34  VVEGQDESSSNLLT--AEQHHFSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLD 91

Query: 232 SGTAVFGVNKFFDLSESDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSL 290
             TA  GV +F DL+ ++  +Q+ GL            L+ P  +N             +
Sbjct: 92  P-TASHGVTQFSDLTSAEFRKQVLGLR----------KLRLPKDANTA----------PI 130

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVD 350
              +DLPE FDWR +G +  VK QG C  CW+FS  G +E  H +    L  LS QQLVD
Sbjct: 131 LPTNDLPEDFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVD 190

Query: 351 CDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 401
           CD           + GCNGG M+ A +Y +  GG++ ++ YPY     +RG    ++   
Sbjct: 191 CDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG--MDRGACKFDKNKV 248

Query: 402 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQRL------ 452
              V  +S +   +E+++   +   GPL+V +NA  +  Y GGV      ++RL      
Sbjct: 249 AAGVANFSVVSL-DEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVLL 307

Query: 453 --YGTSI---------PYWIVKNSWGSDWGE 472
             YG++          PYWI+KNSWG  WGE
Sbjct: 308 VGYGSAAYAPVRMKEKPYWIIKNSWGESWGE 338



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 17/166 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M+ A +Y +  GG++ ++ YPY   + 
Sbjct: 179 ELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGMD- 237

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
            RG    ++      V  +S +   +E+++   +   GPL+V +NA  +  Y GGV    
Sbjct: 238 -RGACKFDKNKVAAGVANFSVVSL-DEDQIAANLVKNGPLAVAINAVFMQTYIGGVS--C 293

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKD--GTSIPYWIVKNSWGSDWGE 651
             +C+ +  +H +++VGYG            PYWI+KNSWG  WGE
Sbjct: 294 PYICS-RRLDHGVLLVGYGSAAYAPVRMKEKPYWIIKNSWGESWGE 338



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 22/163 (13%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L +    F  F R   K Y S E+   R   F +N+ +A  +Q+ D  TA   V +F DL
Sbjct: 46  LTAEQHHFSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDP-TASHGVTQFSDL 104

Query: 98  SDSDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           + ++  +Q+ GL            L+ P  +N             +   +DLPE FDWR 
Sbjct: 105 TSAEFRKQVLGLR----------KLRLPKDANTA----------PILPTNDLPEDFDWRE 144

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +G +  VK QG C  CW+FS  G +E  H +    L  LS Q 
Sbjct: 145 KGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQ 187


>gi|24285904|gb|AAL14199.1| cysteine proteinase precursor [Ipomoea batatas]
 gi|56961686|gb|AAK15148.2| cysteine proteinase-like protein [Ipomoea batatas]
          Length = 341

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 41/295 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTG 255
           +  + +VY +  +  +R   F  NVE  E +    +     G+N F DL+  + +    G
Sbjct: 43  MAQYGRVYENEVEKTKRFNIFKENVEYIESFNKAGTKPYKLGINAFADLTNQEFKASRNG 102

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
             L        P                 F++ ++     +P   DWR +G ++ VK+QG
Sbjct: 103 YKLPHDCSSNTP-----------------FRYENV---SSVPTTVDWRTKGAVTPVKDQG 142

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDN 373
           +C CCWAFSAV  +E +  +   +L  LS Q+LVDCD+   + GC GG MDDA  +II+N
Sbjct: 143 QCGCCWAFSAVAAMEGITKLSTGNLISLSEQELVDCDVKGIDQGCEGGLMDDAFSFIINN 202

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++  YPY+ ++    C   +      K+  Y  +P   E  ++K VA + P+SV +
Sbjct: 203 KGLTTESNYPYQGTDGS--CKKSKSSNSAAKISGYEDVPANSESALEKAVANQ-PVSVAI 259

Query: 434 NANG--LFYYSGGV--------IDLNQRLYGTSIP-----YWIVKNSWGSDWGEK 473
           +A G    +YS GV        +D      G  I      YW+VKNSWG+ WGEK
Sbjct: 260 DAGGSDFQFYSSGVFTGECGTELDHGVTAVGYGIAEDGSKYWLVKNSWGTSWGEK 314



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +    L  L+ ++LVDCD+   + GC GG MDDA  +II+N G+ ++  YPY+ ++ 
Sbjct: 159 ITKLSTGNLISLSEQELVDCDVKGIDQGCEGGLMDDAFSFIINNKGLTTESNYPYQGTDG 218

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C   +      K+  Y  +P   E  ++K VA + P+SV ++A G    +YS GV  
Sbjct: 219 S--CKKSKSSNSAAKISGYEDVPANSESALEKAVANQ-PVSVAIDAGGSDFQFYSSGVFT 275

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H +  VGYG  E  DG+   YW+VKNSWG+ WGEK
Sbjct: 276 GE---CGTEL-DHGVTAVGYGIAE--DGSK--YWLVKNSWGTSWGEK 314



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 29/176 (16%)

Query: 32  FQTRGYLNSP--------VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRED 83
           F T  YL +         V R   +M  + +VY +  +  +R   F  NVE  E + +  
Sbjct: 18  FATSAYLATSRTLSDSLMVVRHEQWMAQYGRVYENEVEKTKRFNIFKENVEYIESFNKAG 77

Query: 84  SGTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSL 142
           +      +N F DL++ + +    G  L        P                 F++ ++
Sbjct: 78  TKPYKLGINAFADLTNQEFKASRNGYKLPHDCSSNTP-----------------FRYENV 120

Query: 143 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
                +P   DWR +G ++ VK+QG+C CCWAFSAV  +E +  +   NL  LS Q
Sbjct: 121 ---SSVPTTVDWRTKGAVTPVKDQGQCGCCWAFSAVAAMEGITKLSTGNLISLSEQ 173


>gi|296228726|ref|XP_002759933.1| PREDICTED: cathepsin S isoform 1 [Callithrix jacchus]
          Length = 330

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 117/195 (60%), Gaps = 20/195 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--M 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKY 174

Query: 354 SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY 413
            N GCNGG M +A QYIIDN G+ S+ +YPYKA + +  C   + +       +Y+ +PY
Sbjct: 175 GNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKAMDQK--CQY-DSKYRAATCSKYTELPY 231

Query: 414 GEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI-------DLNQRL----YG--TSIP 458
           G E+ +K+ VA +GP+ VG++A  +  F Y  GV        ++N  +    YG      
Sbjct: 232 GREDVLKEAVANKGPVCVGVDASHSSFFLYRSGVYYDPACTQNVNHGVLVIGYGDLNGEE 291

Query: 459 YWIVKNSWGSDWGEK 473
           YW+VKNSWGS++GE+
Sbjct: 292 YWLVKNSWGSNFGER 306



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 95/160 (59%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG M +A QYIIDN G+ S+ +YPYKA + +  C   
Sbjct: 158 KLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKAMDQK--CQY- 214

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
           + +       +Y+ +PYG E+ +K+ VA +GP+ VG++A  +  F Y  GV       C 
Sbjct: 215 DSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHSSFFLYRSGV--YYDPACT 272

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               NH ++++GYG+   ++     YW+VKNSWGS++GE+
Sbjct: 273 QNV-NHGVLVIGYGDLNGEE-----YWLVKNSWGSNFGER 306



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 166


>gi|461905|sp|Q05094.1|CYSP2_LEIPI RecName: Full=Cysteine proteinase 2; AltName: Full=Amastigote
           cysteine proteinase A-2; Flags: Precursor
 gi|159298|gb|AAA29229.1| cysteine proteinase [Leishmania pifanoi]
          Length = 444

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 30/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E    + G+ L  LS QQLV CD  N GC+GG M  A  +++   NG + 
Sbjct: 150 CWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLH 209

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEE-MKKWVATRGPLSVGMNAN 436
           ++ +YPY +            E   V  +    +  G  E+ M  W+A  GP+++ ++A+
Sbjct: 210 TEDSYPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS 269

Query: 437 GLFYYSGGVIDL---NQRLYGT---------SIPYWIVKNSWGSDWGEK 473
               Y  GV+      Q  +G           +PYW++KNSWG DWGE+
Sbjct: 270 SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 318



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 14/160 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERGCLVG 554
           +L  L+ ++LV CD  N GC+GG M  A  +++ N  G + ++ +YPY +          
Sbjct: 169 ELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSN 228

Query: 555 EEEGFKVKVKEYSRIPYGEEEE-MKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E   V  +    +  G  E+ M  W+A  GP+++ ++A+    Y  GV+      C  
Sbjct: 229 SSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA----CIG 284

Query: 614 KAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
           K  NH +++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 285 KQLNHGVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 318



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAA 96

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              LN  +     +      +   + D                +P+A DWR +G ++ VK
Sbjct: 97  RY-LNGAAYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAVG +E    + G+ L  LS Q
Sbjct: 143 DQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQ 176


>gi|302790836|ref|XP_002977185.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
 gi|300155161|gb|EFJ21794.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
          Length = 299

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 145/291 (49%), Gaps = 44/291 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           H K YSS  +  RR   F   +   E + ++ + T   G+NKF DL+ ++ +    G   
Sbjct: 9   HGKSYSSDSEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRANYVGKFK 68

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
               +D +P+          D ++ +           LP + DWR EG ++ +K+QG+C 
Sbjct: 69  SPRYQDRRPA-------KDVDVDVSS-----------LPTSLDWRQEGAVTPIKDQGQCG 110

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
            CWAFSA+  +E+ H +    L  LS QQL+DCD  + GC GG  +DA +++++NGGV +
Sbjct: 111 SCWAFSAIASIESAHFLATKELVSLSEQQLIDCDTVDQGCQGGFPEDAFKFVVENGGVTT 170

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKE---YSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           ++AYPY           G     K KV E   Y  +     + + K V ++ P++VG+  
Sbjct: 171 EEAYPYTG-------FAGSCNANKNKVVEITGYKDVTKDSADALMKAV-SKTPVTVGICG 222

Query: 436 NGLFY--YSGGVID---LNQR-------LYGT--SIPYWIVKNSWGSDWGE 472
           +   +  Y  G++     N R        YGT   +PYWI+KNSWG+ WGE
Sbjct: 223 SDQNFQNYRSGILSGQCSNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGE 273



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 95/170 (55%), Gaps = 23/170 (13%)

Query: 488 LELTGVLPSK-LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASE 546
           +E    L +K L  L+ ++L+DCD  + GC GG  +DA +++++NGGV +++AYPY    
Sbjct: 121 IESAHFLATKELVSLSEQQLIDCDTVDQGCQGGFPEDAFKFVVENGGVTTEEAYPYTG-- 178

Query: 547 SERGCLVGEEEGFKVKVKE---YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSG 601
                  G     K KV E   Y  +     + + K V ++ P++VG+  +   +  Y  
Sbjct: 179 -----FAGSCNANKNKVVEITGYKDVTKDSADALMKAV-SKTPVTVGICGSDQNFQNYRS 232

Query: 602 GVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           G+  L+ +  N  +++HA++++GYG E       +PYWI+KNSWG+ WGE
Sbjct: 233 GI--LSGQCSN--SRDHAVLVIGYGTE-----GGMPYWIIKNSWGTSWGE 273



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 19/156 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           F ++   H K YSS  +  RR   F   +   E +  + + T    +NKF DL++++ + 
Sbjct: 2   FEDWAAKHGKSYSSDSEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRA 61

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
              G       +D +P+          D ++ +           LP + DWR EG ++ +
Sbjct: 62  NYVGKFKSPRYQDRRPA-------KDVDVDVSS-----------LPTSLDWRQEGAVTPI 103

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG+C  CWAFSA+  +E+ H +    L  LS Q 
Sbjct: 104 KDQGQCGSCWAFSAIASIESAHFLATKELVSLSEQQ 139


>gi|22759715|dbj|BAC10906.1| cysteine proteinase [Zinnia elegans]
          Length = 352

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 156/298 (52%), Gaps = 36/298 (12%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           +L E  +  H K Y S+++ L R E F+ N++  ++   + S   + G+N+F DL+  + 
Sbjct: 47  HLFESWLVKHSKFYESLDEKLHRFEIFMDNLKHIDETNKKVSNYWL-GLNEFADLTHEEF 105

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +    L     L            + + D   + F +   R   DLP++ DWR +G ++ 
Sbjct: 106 KH-KFLGFKGEL------------AERKDESSKEFGY---RDFVDLPKSVDWRKKGAVAP 149

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG+C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  Y
Sbjct: 150 VKNQGQCGSCWAFSTVAAVEGINQIVTGNLTMLSEQELIDCDTTFNNGCNGGLMDYAFAY 209

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           ++   G+  ++ YPY  SE    C   ++   KV +  Y  +P  +E    K +A + P+
Sbjct: 210 VM-RSGLHKEEEYPYIMSEGT--CDEKKDVSEKVTISGYHDVPRNDEASFLKALANQ-PI 265

Query: 430 SVGMNANG--LFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV D      L+  +    YGT+  + Y IV+NSWG  WGEK
Sbjct: 266 SVAIEASGRDFQFYSGGVFDGHCGTELDHGVAAVGYGTTKGLDYVIVRNSWGPKWGEK 323



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 16/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  Y++   G+  ++ YPY  SE    C
Sbjct: 174 IVTGNLTMLSEQELIDCDTTFNNGCNGGLMDYAFAYVM-RSGLHKEEEYPYIMSEGT--C 230

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              ++   KV +  Y  +P  +E    K +A + P+SV + A+G    +YSGGV D +  
Sbjct: 231 DEKKDVSEKVTISGYHDVPRNDEASFLKALANQ-PISVAIEASGRDFQFYSGGVFDGH-- 287

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG  +  D     Y IV+NSWG  WGEK
Sbjct: 288 -CGTEL-DHGVAAVGYGTTKGLD-----YVIVRNSWGPKWGEK 323



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 17/161 (10%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           ++  +  F +++  H K Y S+++ L R E F+ N++  ++  ++ S   +  +N+F DL
Sbjct: 42  IHKVIHLFESWLVKHSKFYESLDEKLHRFEIFMDNLKHIDETNKKVSNYWL-GLNEFADL 100

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           +  + +    L     L            + + D   + F +   R   DLP++ DWR +
Sbjct: 101 THEEFKH-KFLGFKGEL------------AERKDESSKEFGY---RDFVDLPKSVDWRKK 144

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G ++ VK QG+C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 145 GAVAPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTMLSEQ 185


>gi|86355549|ref|YP_473217.1| Cathepsin [Hyphantria cunea nucleopolyhedrovirus]
 gi|86198154|dbj|BAE72318.1| Cathepsin [Hyphantria cunea nucleopolyhedrovirus]
          Length = 324

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 163/338 (48%), Gaps = 39/338 (11%)

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDY 227
           K   C     V    A   ++  +  E  +   +K YSS  + LRR + F  N+E+    
Sbjct: 3   KIVLCLLVFCVAHSAAYDLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEI-II 61

Query: 228 QSEDSGTAVFGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 286
           ++++  TA + +NKF DLS+ + + + TGL L             P    QT        
Sbjct: 62  KNQNDTTAQYEINKFSDLSKDETISKYTGLAL-------------PL---QTQNFCEVVV 105

Query: 287 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQ 346
            N  R  D  P  FDWR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS Q
Sbjct: 106 LN--RPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQ 163

Query: 347 QLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           QL+DCD  + GCNGG +  A + ++  GGV ++  YPY+ S+    C V   +      K
Sbjct: 164 QLIDCDYVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDG--NCRVDVAKFVVKVKK 221

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT- 455
            Y  I    EE++K  +   GP+ V ++A+ +  Y  G++       LN  +    YG  
Sbjct: 222 CYRYIAVF-EEKLKDLLRIVGPIPVAIDASDIVNYRRGIMRYCSNYGLNHAVLLVGYGVE 280

Query: 456 -SIPYWIVKNSWGSDWGE----KVEDKVGSSGNRTRDL 488
            ++PYWI+KN+WG DWGE    +V+  + + G R   L
Sbjct: 281 NNVPYWILKNTWGEDWGEQGYFRVQQNINACGIRNELL 318



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 12/157 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++L+DCD  + GCNGG +  A + ++  GGV ++  YPY+ S+    C V  
Sbjct: 155 NQLINLSEQQLIDCDYVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDG--NCRVDV 212

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            +      K Y  I    EE++K  +   GP+ V ++A+ +  Y  G++    R C+   
Sbjct: 213 AKFVVKVKKCYRYIAVF-EEKLKDLLRIVGPIPVAIDASDIVNYRRGIM----RYCSNYG 267

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NHA+++VGYG E      ++PYWI+KN+WG DWGE+
Sbjct: 268 LNHAVLLVGYGVE-----NNVPYWILKNTWGEDWGEQ 299



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 86/181 (47%), Gaps = 23/181 (12%)

Query: 22  IKVALLESNIFQTRGY--LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           I + LL   +  +  Y  L +P + F +F+   +K YSS  + LRR + F  N+E+    
Sbjct: 4   IVLCLLVFCVAHSAAYDLLKAP-SYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIK 62

Query: 80  QREDSGTAVFEVNKFFDLS-DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
            + D+ TA +E+NKF DLS D  + + TGL L             P    QT        
Sbjct: 63  NQNDT-TAQYEINKFSDLSKDETISKYTGLAL-------------PL---QTQNFCEVVV 105

Query: 139 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            N  R  D  P  FDWR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS Q
Sbjct: 106 LN--RPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQ 163

Query: 199 H 199
            
Sbjct: 164 Q 164


>gi|102140014|gb|ABF70145.1| cysteine protease, putative [Musa acuminata]
          Length = 373

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 146/296 (49%), Gaps = 43/296 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  H + Y    +  +R   F +NVE  E + +      +   N+F DL+  + +     
Sbjct: 39  MARHGRTYKDAAEKEQRLGIFKSNVEYIESFNAGKRKYQL-AANQFADLTHEEFK----- 92

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQ 314
                      ++   F  + T  +      N  RHG    +P++ DWR++G ++ VK+Q
Sbjct: 93  -----------AMHTGFKPSGTGAKKAG---NGFRHGSLSSVPDSVDWRSKGAVTPVKDQ 138

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIID 372
           G C  CWAF+ V  VE +  I    L  LS QQLVDCD+   + GC GG MD A ++I++
Sbjct: 139 GLCGSCWAFTVVAAVEGITKIVTGKLISLSEQQLVDCDVHGKDQGCQGGDMDAAFEFIVN 198

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ S+  YPY+  E +R C           ++ +  +P  +E+ ++K VA + P+SVG
Sbjct: 199 NGGITSEANYPYE--EVQRLCNAHNASFVVATIESHEDVPTNDEKALRKAVANQ-PVSVG 255

Query: 433 MNANGLF---YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           ++A        YSGGV       DL+  +    YGT+     YW+ KNSWG  WGE
Sbjct: 256 IDAGSSLDFQLYSGGVFSGECGTDLDHAVTVVGYGTTSDGTKYWLAKNSWGETWGE 311



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 16/167 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T ++  KL  L+ ++LVDCD+   + GC GG MD A ++I++NGG+ S+  YPY+  E 
Sbjct: 156 ITKIVTGKLISLSEQQLVDCDVHGKDQGCQGGDMDAAFEFIVNNGGITSEANYPYE--EV 213

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF---YYSGGVI 604
           +R C           ++ +  +P  +E+ ++K VA + P+SVG++A        YSGGV 
Sbjct: 214 QRLCNAHNASFVVATIESHEDVPTNDEKALRKAVANQ-PVSVGIDAGSSLDFQLYSGGVF 272

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                 C     +HA+ +VGYG     DGT   YW+ KNSWG  WGE
Sbjct: 273 SGE---CGTDL-DHAVTVVGYG--TTSDGT--KYWLAKNSWGETWGE 311



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 26/164 (15%)

Query: 40  SPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEV--NKFFDL 97
           S   R + +M  H + Y    +  +R   F +NVE  E +   ++G   +++  N+F DL
Sbjct: 30  SMAERHVEWMARHGRTYKDAAEKEQRLGIFKSNVEYIESF---NAGKRKYQLAANQFADL 86

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWR 155
           +  + +                ++   F  + T  +      N  RHG    +P++ DWR
Sbjct: 87  THEEFK----------------AMHTGFKPSGTGAKKAG---NGFRHGSLSSVPDSVDWR 127

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++G ++ VK+QG C  CWAF+ V  VE +  I    L  LS Q 
Sbjct: 128 SKGAVTPVKDQGLCGSCWAFTVVAAVEGITKIVTGKLISLSEQQ 171


>gi|218202087|gb|EEC84514.1| hypothetical protein OsI_31214 [Oryza sativa Indica Group]
          Length = 348

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 154/313 (49%), Gaps = 51/313 (16%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF--GVNKFFDLSESDLQQLT 254
           +  + ++Y    +  RR E F  N    E +   ++G   F  GVN+F DL+  + +   
Sbjct: 41  MAQYGRMYKDDAEKARRFEVFKANAAFIESF---NAGNHKFWLGVNQFADLTNDEFR--- 94

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
              L  T +   PS      + +  T  R    N     D LP   DWR +GV++ +K+Q
Sbjct: 95  ---LTKTNKGFIPS------TTRVPTGFRYENVNI----DALPATMDWRTKGVVTPIKDQ 141

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIID 372
           G+C CCWAFSAV  +E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II 
Sbjct: 142 GQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIK 201

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ ++  YPY A++ +   +          +K Y  +P   E  + K VA + P+SV 
Sbjct: 202 NGGLTTESNYPYAAADDKCKSVSNS----VASIKGYEDVPANNEAALMKAVANQ-PVSVA 256

Query: 433 MNANGLF--YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK---- 473
           ++ + +   +Y GGV+      DL+  +    YG +     YW++KNSWG  WGE     
Sbjct: 257 VDGDDMTFQFYKGGVMIGSCGTDLDHGIVAIGYGKASDGTKYWLLKNSWGMTWGENGFLR 316

Query: 474 ----VEDKVGSSG 482
               + DK G  G
Sbjct: 317 MEKDISDKRGMCG 329



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+ ++  YPY A++ +   +  
Sbjct: 166 KLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYAAADDKCKSVSN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P   E  + K VA + P+SV ++ + +   +Y GGV+  +   C 
Sbjct: 226 S----VASIKGYEDVPANNEAALMKAVANQ-PVSVAVDGDDMTFQFYKGGVMIGS---CG 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H ++ +GYG+    DGT   YW++KNSWG  WGE   L
Sbjct: 278 TDL-DHGIVAIGYGKAS--DGTK--YWLLKNSWGMTWGENGFL 315



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 21/159 (13%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF--EVNKFFDLSD 99
             R   +M  + ++Y    +  RR E F  N    E +   ++G   F   VN+F DL++
Sbjct: 34  AARHERWMAQYGRMYKDDAEKARRFEVFKANAAFIESF---NAGNHKFWLGVNQFADLTN 90

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
            + +      L  T +   PS      + +  T  R    N     D LP   DWR +GV
Sbjct: 91  DEFR------LTKTNKGFIPS------TTRVPTGFRYENVNI----DALPATMDWRTKGV 134

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ +K+QG+C CCWAFSAV  +E +  +    L  LS Q
Sbjct: 135 VTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQ 173


>gi|67773370|gb|AAY81942.1| cysteine protease 3 [Paragonimus westermani]
          Length = 321

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 147/299 (49%), Gaps = 44/299 (14%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E   + + KVY++ ED  +R   F  N+ +A+  Q +D GTA +GV +F DL+  +  
Sbjct: 26  LYEQFKRDYGKVYAN-EDDQKRFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEFA 84

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 311
                            L AP +++Q    ++  +   L+     PE  DWRA+G ++ V
Sbjct: 85  A--------------KYLSAPVNNDQ----VKRVRPTGLKAA---PERIDWRAKGAVTAV 123

Query: 312 KEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII 371
           + QG C  CWAFS  G VE    I+   L  LS QQLVDCD +  GCNGG    +   I+
Sbjct: 124 ENQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQLVDCDRAADGCNGGWPASSYLEIM 183

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG-EEEEMKKWVATRGPLS 430
             GG+ S   YPY   + +  C + E+E    K+ +   I  G  E++   ++A  GPLS
Sbjct: 184 HMGGLESQDDYPYAGVKEQ--CFM-EKERLLAKIDD--SIALGPSEDDNAAYLAEHGPLS 238

Query: 431 VGMNANGLFYYSGGVI----------DLNQRLYGTS------IPYWIVKNSWGSDWGEK 473
             +NA  L YY  G+I          DLN  +          +PYWI+KNSW  +WGEK
Sbjct: 239 TLLNAITLQYYQSGIIHPSYEECSPVDLNHAVLTVGYDKEGDMPYWIIKNSWNVEWGEK 297



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 87/157 (55%), Gaps = 11/157 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCD +  GCNGG    +   I+  GG+ S   YPY   + +  C + E+
Sbjct: 151 QLVSLSKQQLVDCDRAADGCNGGWPASSYLEIMHMGGLESQDDYPYAGVKEQ--CFM-EK 207

Query: 557 EGFKVKVKEYSRIPYG-EEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
           E    K+ +   I  G  E++   ++A  GPLS  +NA  L YY  G+I  +   C+P  
Sbjct: 208 ERLLAKIDD--SIALGPSEDDNAAYLAEHGPLSTLLNAITLQYYQSGIIHPSYEECSPVD 265

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NHA++ VGY +E       +PYWI+KNSW  +WGEK
Sbjct: 266 LNHAVLTVGYDKE-----GDMPYWIIKNSWNVEWGEK 297



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 22/155 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           +  F RD+ KVY++ ED  +R   F  N+ +A+  Q +D GTA + V +F DL+  +   
Sbjct: 27  YEQFKRDYGKVYAN-EDDQKRFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEFAA 85

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                           L AP +++Q    ++  +   L+     PE  DWRA+G ++ V+
Sbjct: 86  --------------KYLSAPVNNDQ----VKRVRPTGLKAA---PERIDWRAKGAVTAVE 124

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG C  CWAFS  G VE    I+   L  LS Q 
Sbjct: 125 NQGSCGSCWAFSTAGNVEGQWFIKTGQLVSLSKQQ 159


>gi|112490572|pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
 gi|112490573|pdb|2FO5|B Chain B, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
 gi|112490574|pdb|2FO5|C Chain C, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
 gi|112490575|pdb|2FO5|D Chain D, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
          Length = 262

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/211 (40%), Positives = 122/211 (57%), Gaps = 26/211 (12%)

Query: 295 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS 354
           DLP + DWR +G ++ VK+QGKC  CWAFS V  VE ++AI+  SL  LS Q+L+DCD +
Sbjct: 3   DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA 62

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV---GEEEGFKVKVKEYSR 410
            N GC GG MD+A +YI +NGG++++ AYPY+A+     C V    +     V +  +  
Sbjct: 63  DNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGT--CNVARAAQNSPVVVHIDGHQD 120

Query: 411 IPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV--------IDLNQRLYGTSI--- 457
           +P   EE++ + VA + P+SV + A+G    +YS GV        +D    + G  +   
Sbjct: 121 VPANSEEDLARAVANQ-PVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAVVGYGVAED 179

Query: 458 --PYWIVKNSWGSDWGE----KVEDKVGSSG 482
              YW VKNSWG  WGE    +VE   G+SG
Sbjct: 180 GKAYWTVKNSWGPSWGEQGYIRVEKDSGASG 210



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 17/169 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +    L  L+ ++L+DCD + N GC GG MD+A +YI +NGG++++ AYPY+A+   
Sbjct: 40  INAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGT 99

Query: 549 RGCLV---GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGV 603
             C V    +     V +  +  +P   EE++ + VA + P+SV + A+G    +YS GV
Sbjct: 100 --CNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQ-PVSVAVEASGKAFMFYSEGV 156

Query: 604 IDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                  C  +  +H + +VGYG  E  DG +  YW VKNSWG  WGE+
Sbjct: 157 FTGE---CGTE-LDHGVAVVGYGVAE--DGKA--YWTVKNSWGPSWGEQ 197



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 36/52 (69%)

Query: 147 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           DLP + DWR +G ++ VK+QGKC  CWAFS V  VE ++AI+  +L  LS Q
Sbjct: 3   DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQ 54


>gi|340053966|emb|CCC48259.1| cysteine peptidase precursor, fragment, partial [Trypanosoma vivax
           Y486]
          Length = 447

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 143/293 (48%), Gaps = 39/293 (13%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG-- 255
           Q + + Y +  +   R   F  N+ ++  Y + +   A FGV  F DL+  + +      
Sbjct: 31  QKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRTRYHNG 89

Query: 256 -LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
             + ++    ++  +Q P                        P A DWR +G ++ VK+Q
Sbjct: 90  ERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVTPVKDQ 129

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--D 372
           G C  CW+FSA+G +E   A  GN LT LS Q LV CD  + GC GG MD+A ++I+  +
Sbjct: 130 GSCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKEN 189

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           +G V ++++YPY + +  +   +         +  +  IP+ +E+ + K++A  GP++V 
Sbjct: 190 SGKVYTEKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPH-DEDAIAKYLADNGPVAVA 248

Query: 433 MNANGLFYYSGGVID------LNQRLY------GTSIPYWIVKNSWGSDWGEK 473
           ++A     YSGGV+       LN  +        +  PYWI+KNSW S WGEK
Sbjct: 249 VDATTFMSYSGGVVTSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEK 301



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 91/157 (57%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD  + GC GG MD+A ++I+  ++G V ++++YPY + +  +   +  
Sbjct: 155 LTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKENSGKVYTEKSYPYVSEDGSKPFCIPY 214

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  IP+ +E+ + K++A  GP++V ++A     YSGGV+      C  +A
Sbjct: 215 GHEVGATITGHVDIPH-DEDAIAKYLADNGPVAVAVDATTFMSYSGGVVTS----CTSEA 269

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NH +++VGY +  K      PYWI+KNSW S WGEK
Sbjct: 270 LNHGVLLVGYNDSSKP-----PYWIIKNSWSSSWGEK 301



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 24/157 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F + + + Y +  +   R   F  N+ ++  Y   +   A F V  F DL+  + + 
Sbjct: 26  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRT 84

Query: 105 LTG---LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                  + ++    ++  +Q P                        P A DWR +G ++
Sbjct: 85  RYHNGERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVT 124

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CW+FSA+G +E   A  GN LT LS Q
Sbjct: 125 PVKDQGSCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQ 161


>gi|443724292|gb|ELU12369.1| hypothetical protein CAPTEDRAFT_165495 [Capitella teleta]
          Length = 351

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 156/306 (50%), Gaps = 41/306 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDY---QSEDSGTAVFGVNKFFDLSESDLQQLT-G 255
           H++ Y   E++ R+ E F  N++K E +    S+   +   G+N+F D+   +   +  G
Sbjct: 51  HERNYGETEEMQRK-EVFRNNLKKIEMHNYLHSQGKSSYRMGINQFADMEVKEFASVVNG 109

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
             +++  + ++  L + + S                    LP   DWR EG ++ +K+QG
Sbjct: 110 FRMNNRTK-VRDHLHSHYISPAIPVS--------------LPAEVDWRKEGYVTPIKDQG 154

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDN 373
            C  CW+FS  G +E  H  +   L  LS Q L+DC  S  N GCNGG MD A QYI DN
Sbjct: 155 HCGSCWSFSTTGALEGQHFRKTGKLVSLSEQNLIDCSTSYGNNGCNGGVMDYAFQYIKDN 214

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G  ++ +YPY+A++   G    ++E        Y+ +P G+EE+MK+ VA  GP+SV +
Sbjct: 215 DGDDTEDSYPYEAAD---GPCRFKKEYVGATDTGYTDLPKGDEEKMKEAVAMVGPVSVAI 271

Query: 434 NANGLFY--YSGGVID--------LNQRL----YGTSI--PYWIVKNSWGSDWGEKVEDK 477
           +A+   +  Y  GV D        L+  +    YGT +   YW+VKNSWG+ WG++   K
Sbjct: 272 DASHTSFQMYQSGVYDEVECDPEGLDHGVLVVGYGTELGQDYWLVKNSWGTKWGDEGYIK 331

Query: 478 VGSSGN 483
           +  + N
Sbjct: 332 MSRNKN 337



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 98/160 (61%), Gaps = 14/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + L+DC  S  N GCNGG MD A QYI DN G  ++ +YPY+A++   G    
Sbjct: 178 KLVSLSEQNLIDCSTSYGNNGCNGGVMDYAFQYIKDNDGDDTEDSYPYEAAD---GPCRF 234

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
           ++E        Y+ +P G+EE+MK+ VA  GP+SV ++A+   +  Y  GV D  +  C+
Sbjct: 235 KKEYVGATDTGYTDLPKGDEEKMKEAVAMVGPVSVAIDASHTSFQMYQSGVYD--EVECD 292

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           P+  +H +++VGYG E  +D     YW+VKNSWG+ WG++
Sbjct: 293 PEGLDHGVLVVGYGTELGQD-----YWLVKNSWGTKWGDE 327



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 20/157 (12%)

Query: 47  NFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS-GTAVFE--VNKFFDLSDSDLQ 103
           +F   H++ Y   E++ R+ E F  N++K E +    S G + +   +N+F D+   +  
Sbjct: 46  DFKTVHERNYGETEEMQRK-EVFRNNLKKIEMHNYLHSQGKSSYRMGINQFADMEVKEFA 104

Query: 104 QLT-GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            +  G  +++  + ++  L + + S                    LP   DWR EG ++ 
Sbjct: 105 SVVNGFRMNNRTK-VRDHLHSHYISPAIPVS--------------LPAEVDWRKEGYVTP 149

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +K+QG C  CW+FS  G +E  H  +   L  LS Q+
Sbjct: 150 IKDQGHCGSCWSFSTTGALEGQHFRKTGKLVSLSEQN 186


>gi|359492709|ref|XP_002280798.2| PREDICTED: cysteine proteinase RD19a-like [Vitis vinifera]
 gi|147841854|emb|CAN73591.1| hypothetical protein VITISV_022889 [Vitis vinifera]
 gi|302142582|emb|CBI19785.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 145/302 (48%), Gaps = 54/302 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTGLNLDS 260
           K Y++ E+   R   F  N+ +A+ +Q  D  +A  GV +F DL+  + +Q   GL    
Sbjct: 65  KTYATAEEHDHRFNVFKANLRRAKRHQLLDP-SAEHGVTQFSDLTPREFRQNYLGLKRLQ 123

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACC 320
              D Q   +AP    +                 DLP  FDWR  G ++ VK+QG C  C
Sbjct: 124 LPADAQ---KAPILPTK-----------------DLPTDFDWRDHGAVTAVKDQGYCGSC 163

Query: 321 WAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDALQYII 371
           W+FS +G +E  H +   +L  LS QQL+DCD           + GCNGG M++A +YI+
Sbjct: 164 WSFSTIGALEGAHFLATGNLVSLSTQQLLDCDTECDPEEYDACDDGCNGGLMNNAFEYIL 223

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
             GGV  ++ YPY    ++RG     +      V  +S +   +E+++   +   GPL+V
Sbjct: 224 KAGGVAQEEDYPYTG--TDRGLCRFNKTKIAASVANFSVVSL-DEDQIAANLVKNGPLAV 280

Query: 432 GMNANGLFYYSGGV---------IDLNQRL--YGTS---------IPYWIVKNSWGSDWG 471
           G+NA  +  Y  GV         +D    L  YG++          PYWI+KNSWG  WG
Sbjct: 281 GINAVFMQTYKSGVSCPYICSSTLDHGVLLVGYGSAGYSPIRFKEKPYWIIKNSWGESWG 340

Query: 472 EK 473
           E+
Sbjct: 341 EQ 342



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 29/172 (16%)

Query: 498 LSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           L  L+T++L+DCD           + GCNGG M++A +YI+  GGV  ++ YPY    ++
Sbjct: 183 LVSLSTQQLLDCDTECDPEEYDACDDGCNGGLMNNAFEYILKAGGVAQEEDYPYTG--TD 240

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
           RG     +      V  +S +   +E+++   +   GPL+VG+NA  +  Y  GV     
Sbjct: 241 RGLCRFNKTKIAASVANFSVVSL-DEDQIAANLVKNGPLAVGINAVFMQTYKSGVS--CP 297

Query: 609 RLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGEK 652
            +C+    +H +++VGYG         +EK      PYWI+KNSWG  WGE+
Sbjct: 298 YICS-STLDHGVLLVGYGSAGYSPIRFKEK------PYWIIKNSWGESWGEQ 342



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 22/156 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F     K Y++ E+   R   F  N+ +A+ +Q  D  +A   V +F DL+  + +
Sbjct: 55  QFAEFKTKFGKTYATAEEHDHRFNVFKANLRRAKRHQLLDP-SAEHGVTQFSDLTPREFR 113

Query: 104 Q-LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           Q   GL       D Q   +AP    +                 DLP  FDWR  G ++ 
Sbjct: 114 QNYLGLKRLQLPADAQ---KAPILPTK-----------------DLPTDFDWRDHGAVTA 153

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG C  CW+FS +G +E  H +   NL  LS Q
Sbjct: 154 VKDQGYCGSCWSFSTIGALEGAHFLATGNLVSLSTQ 189


>gi|12803615|gb|AAH02642.1| Cathepsin S [Homo sapiens]
 gi|49456313|emb|CAG46477.1| CTSS [Homo sapiens]
 gi|60821573|gb|AAX36579.1| cathepsin S [synthetic construct]
 gi|189069420|dbj|BAG37086.1| unnamed protein product [Homo sapiens]
 gi|261858586|dbj|BAI45815.1| cathepsin S [synthetic construct]
          Length = 331

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 175 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 232 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 291

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 292 EYWLVKNSWGHNFGEE 307



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 111/212 (52%), Gaps = 28/212 (13%)

Query: 456 SIPYWIVKNSWGSDWGEK---VEDKVGSSGNRTRDLELTGVLPS-------KLSRLATEK 505
           S P WI+ +S   DW EK    E K   S          G L +       KL  L+ + 
Sbjct: 109 SNPNWILPDS--VDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 166

Query: 506 LVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVK 562
           LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +     
Sbjct: 167 LVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAAT 223

Query: 563 VKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNPKAQNHAL 620
             +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C     NH +
Sbjct: 224 CSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSCTQNV-NHGV 280

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           ++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 281 LVVGYGDLNGKE-----YWLVKNSWGHNFGEE 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQ 165


>gi|449524070|ref|XP_004169046.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like, partial
           [Cucumis sativus]
          Length = 314

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 153/291 (52%), Gaps = 46/291 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y S E+  RR   +  NV+  +++ S         +N    L+E++   LT     
Sbjct: 26  YGRQYKSREEWERRFTIYQANVQYIDNFNS---------MNHSHTLAENNFADLTNEEFK 76

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQGKC 317
           +T    + ++  P      DT          R+G+  +LP   DWR EG ++ +K QG+C
Sbjct: 77  ATYLGYK-TVSIP------DT--------CFRYGNMVNLPTNVDWRQEGAVTPIKNQGQC 121

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDNGG 375
             CWAFSAV  VE ++ I+   L  LS Q+LVDCD+++G  GCNGG M  A ++ I   G
Sbjct: 122 GSCWAFSAVAAVEGINKIKAGKLISLSEQELVDCDVTSGNQGCNGGYMYKAFEF-IKRTG 180

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPY+ +ES   C   +E+   V +  Y ++P  +E+ +K  VA + P+SV ++A
Sbjct: 181 LTTEIEYPYQGAES--ACNEQKEKYQFVSISGYEKVPVNDEKSLKAAVANQ-PVSVAIDA 237

Query: 436 --NGLFYYSGGVID---LNQRLYGTSI---------PYWIVKNSWGSDWGE 472
             N   +YSGG+      NQ  +G +I          YW+VKNSWG+DWGE
Sbjct: 238 EGNNFQFYSGGIFSGNCGNQLNHGVAIVGYGETSNQAYWLVKNSWGTDWGE 288



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 17/166 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  +   KL  L+ ++LVDCD+++G  GCNGG M  A ++I    G+ ++  YPY+ +ES
Sbjct: 136 INKIKAGKLISLSEQELVDCDVTSGNQGCNGGYMYKAFEFI-KRTGLTTEIEYPYQGAES 194

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVID 605
              C   +E+   V +  Y ++P  +E+ +K  VA + P+SV ++A  N   +YSGG+  
Sbjct: 195 --ACNEQKEKYQFVSISGYEKVPVNDEKSLKAAVANQ-PVSVAIDAEGNNFQFYSGGIFS 251

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            N   C  +  NH + IVGYGE   +      YW+VKNSWG+DWGE
Sbjct: 252 GN---CGNQL-NHGVAIVGYGETSNQ-----AYWLVKNSWGTDWGE 288



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 26/157 (16%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R+  +M  + + Y S E+  RR   +  NV+  +++   +    + E N F DL++    
Sbjct: 18  RYQKWMDKYGRQYKSREEWERRFTIYQANVQYIDNFNSMNHSHTLAE-NNFADLTN---- 72

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVIS 161
                      E+ + +     + +  DT          R+G+  +LP   DWR EG ++
Sbjct: 73  -----------EEFKATYLGYKTVSIPDT--------CFRYGNMVNLPTNVDWRQEGAVT 113

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +K QG+C  CWAFSAV  VE ++ I+   L  LS Q
Sbjct: 114 PIKNQGQCGSCWAFSAVAAVEGINKIKAGKLISLSEQ 150


>gi|256082975|ref|XP_002577726.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 1471

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 148/300 (49%), Gaps = 50/300 (16%)

Query: 202 KVYSSVEDLLRRH----ENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           + Y+ + +  RR      NFV  +E    +Q E   T   GVN+F D ++ +L++L G  
Sbjct: 69  RAYNGIHEETRRFFIFSANFVKMMEHNHAFQ-EGKVTYKMGVNEFTDKTDYELKKLRGYK 127

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
           + S               ++  T +R+           LP   DWR EG ++ VK QG+C
Sbjct: 128 VTSGA-----------IRHKGSTFIRS-------EHTKLPSKVDWRREGAVTDVKNQGQC 169

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGG 375
             CWAFS  G +E  H  + N L  LS QQLVDC  S  N GC+GG M+ A +Y+ DN G
Sbjct: 170 GSCWAFSTTGAIEGQHYRKTNRLVNLSEQQLVDCSKSYGNNGCSGGLMNSAFEYVRDNEG 229

Query: 376 VVSDQAYPYKA---SESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           + S+ +YPY +   +E+ R CL         +V  Y  I  G+E  +   VAT+GP+SV 
Sbjct: 230 IDSEISYPYVSGDGTENNR-CLFN-ASNILAQVTGYVNIHEGDERALMDAVATKGPVSVA 287

Query: 433 MNANGL----FYYSGGVID------LNQRLYGTSI---------PYWIVKNSWGSDWGEK 473
           +NA GL     Y SG   D      L+   +G  +          YW++KNSWG +WGEK
Sbjct: 288 INA-GLPSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEENGRSYWLIKNSWGEEWGEK 346



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 14/164 (8%)

Query: 496 SKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKA---SESERG 550
           ++L  L+ ++LVDC  S  N GC+GG M+ A +Y+ DN G+ S+ +YPY +   +E+ R 
Sbjct: 190 NRLVNLSEQQLVDCSKSYGNNGCSGGLMNSAFEYVRDNEGIDSEISYPYVSGDGTENNR- 248

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQ 608
           CL         +V  Y  I  G+E  +   VAT+GP+SV +NA       Y  G+     
Sbjct: 249 CLFN-ASNILAQVTGYVNIHEGDERALMDAVATKGPVSVAINAGLPSFSMYKSGIYSDTD 307

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                 A +H +++VGYGEE   +G S  YW++KNSWG +WGEK
Sbjct: 308 CEGTLDALDHGVLVVGYGEE---NGRS--YWLIKNSWGEEWGEK 346



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 19/154 (12%)

Query: 46  LNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL 105
           + F R ++ ++           NFV  +E    +Q E   T    VN+F D +D +L++L
Sbjct: 65  IQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQ-EGKVTYKMGVNEFTDKTDYELKKL 123

Query: 106 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 165
            G  + S               ++  T +R+           LP   DWR EG ++ VK 
Sbjct: 124 RGYKVTSGA-----------IRHKGSTFIRS-------EHTKLPSKVDWRREGAVTDVKN 165

Query: 166 QGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           QG+C  CWAFS  G +E  H  + N L  LS Q 
Sbjct: 166 QGQCGSCWAFSTTGAIEGQHYRKTNRLVNLSEQQ 199


>gi|170041165|ref|XP_001848344.1| cathepsin l [Culex quinquefasciatus]
 gi|167864709|gb|EDS28092.1| cathepsin l [Culex quinquefasciatus]
          Length = 340

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 157/300 (52%), Gaps = 38/300 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEK-AEDYQSEDSGTAVFG--VNKFFDL-SESDLQQ 252
           +QH  K  S  E+ LR  + +V N  K A+  Q  + G   F   VNK+ DL  E  +Q 
Sbjct: 32  LQHRKKYDSETEERLRL-KIYVQNKHKIAKHNQRFEQGQEKFRLRVNKYTDLLHEEFVQT 90

Query: 253 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
           L G N  +     +P L+      + D  +   +  ++    ++P+  DWR +G ++ VK
Sbjct: 91  LNGFNRTNAK---KPMLKGV----KIDEPVTYIEPANV----EVPKTVDWREKGAVTPVK 139

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYI 370
           +QG C  CW+FSA G +E  H  +   L  LS Q LVDC     N GCNGG MD A QYI
Sbjct: 140 DQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKYGNNGCNGGMMDFAFQYI 199

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
            DNGG+ +++AYPY+A +    C     +      K +  IP G+E+ + K +AT GP+S
Sbjct: 200 KDNGGIDTEKAYPYEAIDDT--CHYN-PKAVGATDKGFVDIPQGDEKALMKAIATAGPVS 256

Query: 431 VGMNAN--GLFYYSGGVI--------DLNQRL----YGTSIP---YWIVKNSWGSDWGEK 473
           V ++A+     +YS GV         +L+  +    YGTS     YW+VKNSWG+ WG++
Sbjct: 257 VAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQ 316



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 94/160 (58%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD A QYI DNGG+ +++AYPY+A +    C   
Sbjct: 166 KLVSLSEQNLVDCSTKYGNNGCNGGMMDFAFQYIKDNGGIDTEKAYPYEAIDDT--CHYN 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCN 612
             +      K +  IP G+E+ + K +AT GP+SV ++A+     +YS GV    Q  C+
Sbjct: 224 -PKAVGATDKGFVDIPQGDEKALMKAIATAGPVSVAIDASHESFQFYSEGVYYEPQ--CD 280

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H ++ VGYG  E+ +     YW+VKNSWG+ WG++
Sbjct: 281 SENLDHGVLAVGYGTSEEGED----YWLVKNSWGTTWGDQ 316



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSD-LQQLTG 107
           H K Y S  +   R + +V N  K A+  QR + G   F   VNK+ DL   + +Q L G
Sbjct: 34  HRKKYDSETEERLRLKIYVQNKHKIAKHNQRFEQGQEKFRLRVNKYTDLLHEEFVQTLNG 93

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
            N  +     +P L+      + D  +   +  ++    ++P+  DWR +G ++ VK+QG
Sbjct: 94  FNRTNAK---KPMLKGV----KIDEPVTYIEPANV----EVPKTVDWREKGAVTPVKDQG 142

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            C  CW+FSA G +E  H  +   L  LS Q+
Sbjct: 143 HCGSCWSFSATGALEGQHFRKTGKLVSLSEQN 174


>gi|356517310|ref|XP_003527331.1| PREDICTED: vignain-like [Glycine max]
          Length = 342

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 150/294 (51%), Gaps = 36/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + +VY    +  +R + F  NV   E + +         +N+F DL++ + + L   
Sbjct: 41  MAQYGRVYKDAAEKEKRFQVFKNNVHFIESFNAAGDKPFNLSINQFADLNDEEFKAL--- 97

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                L ++Q   +A +    T+T   +F++ S+     +P   D R  G ++ +K+QG+
Sbjct: 98  -----LINVQK--KASWVETSTET---SFRYESV---TKIPATIDRRKRGAVTPIKDQGR 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG-GCNGGRMDDALQYIIDNGG 375
           C  CWAFSAV   E +H I    L  LS Q+LVDC      GC GG +DDA ++I   GG
Sbjct: 145 CGSCWAFSAVAATEGIHQITTGKLVPLSEQELVDCVKGESEGCIGGYVDDAFEFIAKKGG 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + S+  YPYK     + C V +E     ++K Y ++P   E+ + K VA + P+SV ++A
Sbjct: 205 IASETHYPYKG--VNKTCKVKKETHGVAEIKGYEKVPSNNEKALLKAVANQ-PVSVYIDA 261

Query: 436 --NGLFYYSGGVI-------DLNQRL----YGTSI---PYWIVKNSWGSDWGEK 473
             +   YYS G+        D N  +    YG ++    YW+VKNSWG++WGE+
Sbjct: 262 GTHAFKYYSSGIFNARNCGTDPNHAVAVVGYGKALDDSKYWLVKNSWGTEWGER 315



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 13/163 (7%)

Query: 493 VLPSKLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   KL  L+ ++LVDC      GC GG +DDA ++I   GG+ S+  YPYK     + C
Sbjct: 163 ITTGKLVPLSEQELVDCVKGESEGCIGGYVDDAFEFIAKKGGIASETHYPYKG--VNKTC 220

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQR 609
            V +E     ++K Y ++P   E+ + K VA + P+SV ++A  +   YYS G+   N R
Sbjct: 221 KVKKETHGVAEIKGYEKVPSNNEKALLKAVANQ-PVSVYIDAGTHAFKYYSSGI--FNAR 277

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C     NHA+ +VGYG    K      YW+VKNSWG++WGE+
Sbjct: 278 NCGTDP-NHAVAVVGYG----KALDDSKYWLVKNSWGTEWGER 315



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 17/183 (9%)

Query: 16  YLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           YL  F++ +A+  S++   R        R   +M  + +VY    +  +R + F  NV  
Sbjct: 9   YLILFLV-LAVWTSHVMSRRLSEACTSERHEKWMAQYGRVYKDAAEKEKRFQVFKNNVHF 67

Query: 76  AEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMR 135
            E +           +N+F DL+D + + L        L ++Q   +A +    T+T   
Sbjct: 68  IESFNAAGDKPFNLSINQFADLNDEEFKAL--------LINVQK--KASWVETSTET--- 114

Query: 136 AFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTEL 195
           +F++ S+     +P   D R  G ++ +K+QG+C  CWAFSAV   E +H I    L  L
Sbjct: 115 SFRYESV---TKIPATIDRRKRGAVTPIKDQGRCGSCWAFSAVAATEGIHQITTGKLVPL 171

Query: 196 SVQ 198
           S Q
Sbjct: 172 SEQ 174


>gi|167521499|ref|XP_001745088.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776702|gb|EDQ90321.1| predicted protein [Monosiga brevicollis MX1]
          Length = 294

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 138/287 (48%), Gaps = 40/287 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS---GTAVFGVNKFFDLSESDLQQLTGL 256
           + K Y S     +R   F  N+E    + +E +    +   GVN+F DL+   + +   L
Sbjct: 5   YSKSYESEAVEAKRLAAFEANLEFINKHNAEHAQGLHSYTVGVNEFADLT---IDEFMAL 61

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            + S      P                   +N++       ++ DWR +G ++ +K QG+
Sbjct: 62  YVPSKFNRTMP-------------------YNTVYLPATSEDSVDWRTKGAVTPIKNQGQ 102

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C  CW+FS  G  E  HAI   +L  LS QQLVDC  S  N GCNGG MDDA +YII N 
Sbjct: 103 CGSCWSFSTTGSTEGAHAIATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDDAFKYIISNK 162

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ +++ YPY A +    C   +E      +  YS +P   E+++   VA +GP+SV + 
Sbjct: 163 GLDTEEDYPYTAQDGT--CNKEKEAKHAATISSYSDVPKNNEDQLAAAVA-KGPVSVAIE 219

Query: 435 AN--GLFYYSGGVIDLN--------QRLYGTSIPYWIVKNSWGSDWG 471
           A+  G   Y  GV D N          + G +  YWIVKNSWG+ WG
Sbjct: 220 ADQSGFQLYKSGVFDGNCGTNLDHGVLVVGYTDDYWIVKNSWGTTWG 266



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 20/162 (12%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           +    L  L+ ++LVDC  S  N GCNGG MDDA +YII N G+ +++ YPY A +    
Sbjct: 121 IATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDDAFKYIISNKGLDTEEDYPYTAQDGT-- 178

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQ 608
           C   +E      +  YS +P   E+++   VA +GP+SV + A+  G   Y  GV D N 
Sbjct: 179 CNKEKEAKHAATISSYSDVPKNNEDQLAAAVA-KGPVSVAIEADQSGFQLYKSGVFDGN- 236

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
             C     +H +++VGY ++         YWIVKNSWG+ WG
Sbjct: 237 --CGTNL-DHGVLVVGYTDD---------YWIVKNSWGTTWG 266



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 25/155 (16%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS---GTAVFEVNKFFDLSDSDLQQ 104
           F  D+ K Y S     +R   F  N+E    +  E +    +    VN+F DL+   + +
Sbjct: 1   FKSDYSKSYESEAVEAKRLAAFEANLEFINKHNAEHAQGLHSYTVGVNEFADLT---IDE 57

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              L + S      P                   +N++       ++ DWR +G ++ +K
Sbjct: 58  FMALYVPSKFNRTMP-------------------YNTVYLPATSEDSVDWRTKGAVTPIK 98

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG+C  CW+FS  G  E  HAI   NL  LS Q 
Sbjct: 99  NQGQCGSCWSFSTTGSTEGAHAIATGNLVSLSEQQ 133


>gi|60396844|gb|AAX19661.1| cysteine proteinase [Populus tomentosa]
          Length = 374

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 155/331 (46%), Gaps = 64/331 (19%)

Query: 180 VVEAMHAIQGNNLTELSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSED 231
           VVE       N LT  + QHH         K Y S E+   R   F +N+ +A  +Q  D
Sbjct: 40  VVEGQDESSPNLLT--AEQHHLSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLD 97

Query: 232 SGTAVFGVNKFFDLSESDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSL 290
             TA  GV +F DL+ ++  +Q+ GL            L+ P  +N+            +
Sbjct: 98  P-TASHGVTQFSDLTSAEFRKQVLGLR----------KLRLPKDANKA----------PI 136

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVD 350
              +DLPE FDWR +G +  VK QG C  CW+FS  G +E  H +    L  LS QQLVD
Sbjct: 137 LPTNDLPEDFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVD 196

Query: 351 CDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 401
           CD           + GCNGG M+ A +Y +  GG++ ++ YPY     +RG    +++  
Sbjct: 197 CDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG--MDRGACKFDKDKV 254

Query: 402 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQRL------ 452
              V  +S +   +E+++   +   GPL+V  NA  +  Y GGV      ++RL      
Sbjct: 255 AAGVANFSVVSL-DEDQIAANLVKNGPLAVATNAVFMQTYIGGVSCPYICSRRLDHGVLL 313

Query: 453 --YGTS---------IPYWIVKNSWGSDWGE 472
             YG++          PYWI+KNSWG  WGE
Sbjct: 314 VGYGSAGYAPVRMKEKPYWIIKNSWGESWGE 344



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 29/172 (16%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M+ A +Y +  GG++ ++ YPY   + 
Sbjct: 185 ELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGMD- 243

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
            RG    +++     V  +S +   +E+++   +   GPL+V  NA  +  Y GGV    
Sbjct: 244 -RGACKFDKDKVAAGVANFSVVSL-DEDQIAANLVKNGPLAVATNAVFMQTYIGGVS--C 299

Query: 608 QRLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ +  +H +++VGYG         +EK      PYWI+KNSWG  WGE
Sbjct: 300 PYICS-RRLDHGVLLVGYGSAGYAPVRMKEK------PYWIIKNSWGESWGE 344



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 22/153 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL-QQLT 106
           F R   K Y S E+   R   F +N+ +A  +Q+ D  TA   V +F DL+ ++  +Q+ 
Sbjct: 62  FKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDP-TASHGVTQFSDLTSAEFRKQVL 120

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           GL            L+ P  +N+            +   +DLPE FDWR +G +  VK Q
Sbjct: 121 GLR----------KLRLPKDANKA----------PILPTNDLPEDFDWREKGAVGPVKNQ 160

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           G C  CW+FS  G +E  H +    L  LS Q 
Sbjct: 161 GSCGSCWSFSTTGALEGAHFLATGELVSLSEQQ 193


>gi|34559455|gb|AAQ75437.1| cathepsin L-like protease [Helicoverpa armigera]
 gi|338855117|gb|AEJ31938.1| cathepsin L-like protease [Helicoverpa assulta]
          Length = 341

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 151/302 (50%), Gaps = 35/302 (11%)

Query: 193 TELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGV--NKFFD-LSESD 249
           +   ++H  +  S VED  R           A+  Q  + G   + +  NK+ D LS   
Sbjct: 28  SAFKLEHSKRYDSEVEDKFRMKIYLENKHRIAKHNQRFEQGAVSYKLRPNKYADMLSHEF 87

Query: 250 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
           +  + G N          +L+ P + +    E R   F +  H    P+  DWR +G ++
Sbjct: 88  VHVMNGFN---------KTLKHPKAVHGKGRESRPATFIAPAH-VTYPDHVDWRKKGAVT 137

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDAL 367
           +VK+QGKC  CWAFS  G +E  H  +   L  LS Q L+DC  +  N GCNGG MD+A 
Sbjct: 138 EVKDQGKCGSCWAFSTTGALEGQHFRKTGYLVSLSEQNLIDCSAAYGNNGCNGGLMDNAF 197

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           +YI DNGG+ +++AYPY+  + +  C    +      V  +  IP G+EE++ + VAT G
Sbjct: 198 KYIKDNGGIDTEKAYPYEGVDDK--CRYNAKNSGADDVG-FVDIPQGDEEKLMQAVATVG 254

Query: 428 PLSVGMNAN--GLFYYSGGV--------IDLNQRL----YGTSIP---YWIVKNSWGSDW 470
           P+SV ++A+     +YS GV         DL+  +    YGT      YW+VKNSWG  W
Sbjct: 255 PVSVAIDASQESFQFYSDGVYYDENCSSTDLDHGVMVVGYGTDEQGGDYWLVKNSWGRTW 314

Query: 471 GE 472
           G+
Sbjct: 315 GD 316



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 15/159 (9%)

Query: 498 LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ + L+DC  +  N GCNGG MD+A +YI DNGG+ +++AYPY+  + +  C    
Sbjct: 168 LVSLSEQNLIDCSAAYGNNGCNGGLMDNAFKYIKDNGGIDTEKAYPYEGVDDK--CRYNA 225

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV-IDLNQRLCN 612
           +      V  +  IP G+EE++ + VAT GP+SV ++A+     +YS GV  D N   C+
Sbjct: 226 KNSGADDVG-FVDIPQGDEEKLMQAVATVGPVSVAIDASQESFQFYSDGVYYDEN---CS 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               +H +++VGYG +E+       YW+VKNSWG  WG+
Sbjct: 282 STDLDHGVMVVGYGTDEQGG----DYWLVKNSWGRTWGD 316



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 14/155 (9%)

Query: 48  FMRDHDKVYSS-VEDLLRRHENFVTNVEKAEDYQREDSGTAVFEV--NKFFD-LSDSDLQ 103
           F  +H K Y S VED  R           A+  QR + G   +++  NK+ D LS   + 
Sbjct: 30  FKLEHSKRYDSEVEDKFRMKIYLENKHRIAKHNQRFEQGAVSYKLRPNKYADMLSHEFVH 89

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            + G N          +L+ P + +    E R   F +  H    P+  DWR +G +++V
Sbjct: 90  VMNGFN---------KTLKHPKAVHGKGRESRPATFIAPAH-VTYPDHVDWRKKGAVTEV 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QGKC  CWAFS  G +E  H  +   L  LS Q
Sbjct: 140 KDQGKCGSCWAFSTTGALEGQHFRKTGYLVSLSEQ 174


>gi|50355613|dbj|BAD29955.1| cysteine protease [Daucus carota]
          Length = 365

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 157/320 (49%), Gaps = 47/320 (14%)

Query: 178 VGVVEAMHAIQGNNLTELSVQH------HDKVYSSVEDLLRRHENFVTNVEKAEDYQSED 231
           +GV+ ++ A +  N   ++  H      + +VY +  +  RR   F  N++  + +   +
Sbjct: 18  IGVLASLAAARSLNEASMTETHDQWMARYGRVYKTANEKNRRSTIFQENLKYIQTFNKAN 77

Query: 232 SGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 291
           +     GVN+F DL+  +                  + +  F S+   T    F++ ++ 
Sbjct: 78  NKPYKLGVNEFADLTNEEFT----------------TSRNKFKSHVCATVTNVFRYENVT 121

Query: 292 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC 351
               +P   DWR +G ++ +K QG+C CCWAFSAV  +E +  ++   L  LS Q+LVDC
Sbjct: 122 ---AVPATMDWRKKGAVTPIKNQGQCGCCWAFSAVAAMEGITQLKTGKLISLSEQELVDC 178

Query: 352 DMSNG---GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEY 408
           D +NG   GC GG MD A  +I  N G+ ++  YPY  ++    C   +E      +  +
Sbjct: 179 D-TNGEDQGCEGGLMDYAFDFIQQNHGLSTETNYPYSGTDGT--CNANKEANHAATITGH 235

Query: 409 SRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTS 456
             +P   E  + K VA + P+SV ++A+G    +YS GV       +L+  +    YGT+
Sbjct: 236 EDVPANSESALLKAVANQ-PISVAIDASGSDFQFYSSGVFTGECGTELDHGVTAVGYGTA 294

Query: 457 ---IPYWIVKNSWGSDWGEK 473
                YW+VKNSWG+ WGE+
Sbjct: 295 ADGTKYWLVKNSWGTSWGEE 314



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 17/168 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG---GCNGGRMDDALQYIIDNGGVVSDQAYPYKASE 546
           +T +   KL  L+ ++LVDCD +NG   GC GG MD A  +I  N G+ ++  YPY  ++
Sbjct: 159 ITQLKTGKLISLSEQELVDCD-TNGEDQGCEGGLMDYAFDFIQQNHGLSTETNYPYSGTD 217

Query: 547 SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI 604
               C   +E      +  +  +P   E  + K VA + P+SV ++A+G    +YS GV 
Sbjct: 218 GT--CNANKEANHAATITGHEDVPANSESALLKAVANQ-PISVAIDASGSDFQFYSSGVF 274

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                 C  +  +H +  VGYG     DGT   YW+VKNSWG+ WGE+
Sbjct: 275 TGE---CGTEL-DHGVTAVGYGT--AADGTK--YWLVKNSWGTSWGEE 314



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 19/151 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           +M  + +VY +  +  RR   F  N++  + + + ++      VN+F DL++ +      
Sbjct: 42  WMARYGRVYKTANEKNRRSTIFQENLKYIQTFNKANNKPYKLGVNEFADLTNEEFT---- 97

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                       + +  F S+   T    F++ ++     +P   DWR +G ++ +K QG
Sbjct: 98  ------------TSRNKFKSHVCATVTNVFRYENVT---AVPATMDWRKKGAVTPIKNQG 142

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +C CCWAFSAV  +E +  ++   L  LS Q
Sbjct: 143 QCGCCWAFSAVAAMEGITQLKTGKLISLSEQ 173


>gi|30749499|pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S.
 gi|163310952|pdb|2R9M|A Chain A, Cathepsin S Complexed With Compound 15
 gi|163310953|pdb|2R9M|B Chain B, Cathepsin S Complexed With Compound 15
 gi|163310954|pdb|2R9N|A Chain A, Cathepsin S Complexed With Compound 26
 gi|163310955|pdb|2R9N|B Chain B, Cathepsin S Complexed With Compound 26
 gi|163310956|pdb|2R9O|A Chain A, Cathepsin S Complexed With Compound 8
 gi|163310957|pdb|2R9O|B Chain B, Cathepsin S Complexed With Compound 8
          Length = 222

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 60

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 61  YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 117

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 118 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 177

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 178 EYWLVKNSWGHNFGEE 193



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 44  KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 101

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 102 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 158

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 159 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 193



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQ 51


>gi|115472081|ref|NP_001059639.1| Os07g0480900 [Oryza sativa Japonica Group]
 gi|27261016|dbj|BAC45132.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113611175|dbj|BAF21553.1| Os07g0480900 [Oryza sativa Japonica Group]
 gi|215693312|dbj|BAG88694.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 376

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 151/314 (48%), Gaps = 54/314 (17%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTG 255
           V+ H + YS  E+  RR   F  N+ +A  +Q+ D  TA  GV  F DL+  + + +LTG
Sbjct: 52  VRRHGREYSGPEEYARRLRVFAANLARAAAHQALDP-TARHGVTPFSDLTREEFEARLTG 110

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L  D   +D++   + P  S    TE              LP +FDWR  G ++ VK QG
Sbjct: 111 LAADVG-DDVR---RRPMPSAAPATEEEV---------SGLPASFDWRDRGAVTDVKMQG 157

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMDDA 366
            C  CWAFS  G VE  + +   +L +LS QQLVDCD +         + GC GG M +A
Sbjct: 158 ACGSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCDAEKKTECDSGCGGGLMTNA 217

Query: 367 LQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI--PYGEE----EEMK 420
             Y++ +GG++   AYPY  ++   G    +     V+V  ++ +  P G +     +M+
Sbjct: 218 YAYLMSSGGLMEQSAYPYTGAQ---GTCRFDANRVAVRVANFTVVAPPGGNDGDGDAQMR 274

Query: 421 KWVATRGPLSVGMNANGLFYYSGGV-----------------IDLNQRLYGT----SIPY 459
             +   GPL+VG+NA  +  Y GGV                 +   +R +        PY
Sbjct: 275 AALVRHGPLAVGLNAAYMQTYVGGVSCPLVCPRAWVNHGVLLVGYGERGFAALRLGHRPY 334

Query: 460 WIVKNSWGSDWGEK 473
           WI+KNSWG  WGE+
Sbjct: 335 WIIKNSWGKAWGEQ 348



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 26/171 (15%)

Query: 501 LATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           L+ ++LVDCD +         + GC GG M +A  Y++ +GG++   AYPY  ++   G 
Sbjct: 185 LSEQQLVDCDHTCDAEKKTECDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQ---GT 241

Query: 552 LVGEEEGFKVKVKEYSRI--PYGE----EEEMKKWVATRGPLSVGMNANGLFYYSGGVID 605
              +     V+V  ++ +  P G     + +M+  +   GPL+VG+NA  +  Y GGV  
Sbjct: 242 CRFDANRVAVRVANFTVVAPPGGNDGDGDAQMRAALVRHGPLAVGLNAAYMQTYVGGV-- 299

Query: 606 LNQRLCNPKA-QNHALIIVGYGEE---EKKDGTSIPYWIVKNSWGSDWGEK 652
            +  L  P+A  NH +++VGYGE      + G   PYWI+KNSWG  WGE+
Sbjct: 300 -SCPLVCPRAWVNHGVLLVGYGERGFAALRLGHR-PYWIIKNSWGKAWGEQ 348



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 77/160 (48%), Gaps = 15/160 (9%)

Query: 41  PVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDS 100
           P  +F  F+R H + YS  E+  RR   F  N+ +A  +Q  D  TA   V  F DL+  
Sbjct: 44  PEAQFAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQALDP-TARHGVTPFSDLTRE 102

Query: 101 DLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
           + + +LTGL  D   +D++   + P  S    TE              LP +FDWR  G 
Sbjct: 103 EFEARLTGLAADVG-DDVR---RRPMPSAAPATEEEV---------SGLPASFDWRDRGA 149

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++ VK QG C  CWAFS  G VE  + +   NL +LS Q 
Sbjct: 150 VTDVKMQGACGSCWAFSTTGAVEGANFLATGNLLDLSEQQ 189


>gi|401416322|ref|XP_003872656.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488880|emb|CBZ24130.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 366

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E    + G+ L  LS QQLV CD  N GC+GG M  A  +++   NG + 
Sbjct: 150 CWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCSGGLMLQAFDWLLQNTNGHLY 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +       C    E     ++  +  I    E+ M  W+A  GP+++ ++A+
Sbjct: 210 TEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDAS 268

Query: 437 GLFYYSGGVIDL---NQRLYGT---------SIPYWIVKNSWGSDWGEK 473
               Y  GV+      Q  +G           +PYW++KNSWG DWGE+
Sbjct: 269 SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L  L+ ++LV CD  N GC+GG M  A  +++ N  G + ++ +YPY +       C  
Sbjct: 169 ELVSLSEQQLVSCDDMNDGCSGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  +  I    E+ M  W+A  GP+++ ++A+    Y  GV+      C  
Sbjct: 229 SSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
           K  NH +++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 284 KQLNHGVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAA 96

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              LN  +     +      +   + D                +P+A DWR +G ++ VK
Sbjct: 97  RY-LNGAAYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAVG +E    + G+ L  LS Q
Sbjct: 143 DQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQ 176


>gi|312381833|gb|EFR27483.1| hypothetical protein AND_05794 [Anopheles darlingi]
          Length = 344

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 160/324 (49%), Gaps = 39/324 (12%)

Query: 178 VGVVEAMHAIQGNNLTE-----LSVQHHDKVYSSVEDLLRRHENFVTNVEK-AEDYQSED 231
           V  + A +A+   NL +       +QH  K  S  E+ +R  + +V N  K A+  Q  D
Sbjct: 8   VSFLAAANAVSIFNLVKEEWNAFKLQHRKKYDSESEERIRM-KIYVQNKHKIAKHNQRYD 66

Query: 232 SGTAVFG--VNKFFDL-SESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN 288
            G   F   VNK+ DL  E  +  L G N  +         +   +  +  T +      
Sbjct: 67  LGQEKFRLRVNKYADLLHEEFVHTLNGFNRSAAAGSKLLGREQLMTIEEPITWIEPANV- 125

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
                 D+P   DWR +G ++ VK+QG C  CW+FSA G +E  H  +   L  LS Q L
Sbjct: 126 ------DVPTTIDWREKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNL 179

Query: 349 VDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           VDC     N GCNGG MD+A QY+ DN G+ +++AYPY+A + E  C     +      K
Sbjct: 180 VDCSTKYGNNGCNGGLMDNAFQYVKDNKGIDTEKAYPYEAIDDE--CHYN-PKAIGATDK 236

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI--------DLNQRL---- 452
            +  IP G+E+ +KK +AT GP+SV ++A+     +YS GV          L+  +    
Sbjct: 237 GFVDIPQGDEKALKKALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVG 296

Query: 453 YGTS---IPYWIVKNSWGSDWGEK 473
           YGT+     YW+VKNSWG+ WG++
Sbjct: 297 YGTTEDGEDYWLVKNSWGTTWGDQ 320



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD+A QY+ DN G+ +++AYPY+A + E  C   
Sbjct: 170 KLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFQYVKDNKGIDTEKAYPYEAIDDE--CHYN 227

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCN 612
             +      K +  IP G+E+ +KK +AT GP+SV ++A+     +YS GV    Q  C+
Sbjct: 228 -PKAIGATDKGFVDIPQGDEKALKKALATVGPVSVAIDASHESFQFYSEGVYYEPQ--CD 284

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H ++ VGYG  E  DG    YW+VKNSWG+ WG++
Sbjct: 285 SEQLDHGVLAVGYGTTE--DGED--YWLVKNSWGTTWGDQ 320



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 11/156 (7%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSD-LQ 103
           F   H K Y S  +   R + +V N  K A+  QR D G   F   VNK+ DL   + + 
Sbjct: 30  FKLQHRKKYDSESEERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYADLLHEEFVH 89

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            L G N  +         +   +  +  T +            D+P   DWR +G ++ V
Sbjct: 90  TLNGFNRSAAAGSKLLGREQLMTIEEPITWIEPANV-------DVPTTIDWREKGAVTPV 142

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG C  CW+FSA G +E  H  +   L  LS Q+
Sbjct: 143 KDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQN 178


>gi|67773380|gb|AAY81947.1| cysteine protease 9 [Paragonimus westermani]
          Length = 322

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 148/301 (49%), Gaps = 48/301 (15%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL- 250
           L E   + + KVY++ ED  +R   F  N+ +A+  Q +D GTA +GV +F DL+  +  
Sbjct: 26  LYEQFKRDYGKVYAN-EDDQKRFAIFKDNLVRAQKLQLKDQGTARYGVTQFSDLTPEEFA 84

Query: 251 -QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
            + L     +  +E ++P            T ++A            PE  DWR +G ++
Sbjct: 85  AKYLRAAVNNDQVERVRP------------TGLKA-----------APERMDWREKGAVT 121

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQY 369
            V+ QG C  CWAFSA G VE    I+   L  LS QQLVDCD    GCNGG    +   
Sbjct: 122 AVENQGSCGSCWAFSAAGNVEGQWFIKTGQLVSLSKQQLVDCDRVAEGCNGGWPVSSYLE 181

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGE-EEEMKKWVATRGP 428
           I   GG+ S+  YPY    +E+ C + +E   K+  K    I  G  EEE   ++A  GP
Sbjct: 182 IKHMGGLESESDYPYVG--AEQTCALNKE---KLLAKIDDLIVLGAYEEEHAAYLAEHGP 236

Query: 429 LSVGMNANGLFYYSGGVI----------DLNQRLYGTS------IPYWIVKNSWGSDWGE 472
           LS  +NA  L +Y  GV+          +LN  +          +PYWI+KNSWG+DWGE
Sbjct: 237 LSTLLNAVALQHYQSGVLNPTYEECPDTELNHAVLTVGYDKEGDMPYWIIKNSWGTDWGE 296

Query: 473 K 473
           K
Sbjct: 297 K 297



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 86/157 (54%), Gaps = 11/157 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCD    GCNGG    +   I   GG+ S+  YPY  +E  + C + +E
Sbjct: 151 QLVSLSKQQLVDCDRVAEGCNGGWPVSSYLEIKHMGGLESESDYPYVGAE--QTCALNKE 208

Query: 557 EGFKVKVKEYSRIPYGE-EEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
              K+  K    I  G  EEE   ++A  GPLS  +NA  L +Y  GV++     C    
Sbjct: 209 ---KLLAKIDDLIVLGAYEEEHAAYLAEHGPLSTLLNAVALQHYQSGVLNPTYEECPDTE 265

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NHA++ VGY +E       +PYWI+KNSWG+DWGEK
Sbjct: 266 LNHAVLTVGYDKE-----GDMPYWIIKNSWGTDWGEK 297



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 26/157 (16%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL-- 102
           +  F RD+ KVY++ ED  +R   F  N+ +A+  Q +D GTA + V +F DL+  +   
Sbjct: 27  YEQFKRDYGKVYAN-EDDQKRFAIFKDNLVRAQKLQLKDQGTARYGVTQFSDLTPEEFAA 85

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           + L     +  +E ++P            T ++A            PE  DWR +G ++ 
Sbjct: 86  KYLRAAVNNDQVERVRP------------TGLKA-----------APERMDWREKGAVTA 122

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           V+ QG C  CWAFSA G VE    I+   L  LS Q 
Sbjct: 123 VENQGSCGSCWAFSAAGNVEGQWFIKTGQLVSLSKQQ 159


>gi|319976406|gb|ADV90878.1| cysteine proteinase B [Leishmania donovani]
          Length = 332

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 159/340 (46%), Gaps = 46/340 (13%)

Query: 235 AVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD 294
           A FG+ KFFDLSE++      LN  +     +      +   + D               
Sbjct: 3   ARFGITKFFDLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA------------ 49

Query: 295 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS 354
            +P+A DWR +G ++ VK QG C  CWAFSAVG +E+  A  G+ L  LS QQLV CD  
Sbjct: 50  -VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQLVSCDDK 108

Query: 355 NGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRI 411
           + GCNGG M  A ++++ +  G V ++++YPY +   +   CL   +     ++  Y  I
Sbjct: 109 DNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMI 168

Query: 412 PYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQ--RLYGTS----IPY 459
           P   E  M  W+A  GP+++ ++A+    Y  GV+       LN    L G +    +PY
Sbjct: 169 P-SNETVMAAWLAENGPIAIAVDASSFMSYQSGVLTSCAGDALNHGVLLVGYNKTGGVPY 227

Query: 460 WIVKNSWGSDWGEK--VEDKVGSSGNRTRDLELTGVLPSKLS-------------RLATE 504
           W++KNSWG DWGEK  V   +G +     +  ++  +P  L+             R+  E
Sbjct: 228 WVIKNSWGEDWGEKGYVRVAMGLNACLLSEYPVSAHVPRSLTPGPGTESEERAPKRVTVE 287

Query: 505 KLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 543
           +++  DM    GC    +   + Y    GG    +  P K
Sbjct: 288 QMMCTDMYCREGCKKSLLTANVCYKNGGGGSSMTKCGPQK 327



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLVG 554
           L  L+ ++LV CD  + GCNGG M  A ++++ +  G V ++++YPY +   +   CL  
Sbjct: 94  LVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNS 153

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            +     ++  Y  IP   E  M  W+A  GP+++ ++A+    Y  GV+      C   
Sbjct: 154 SKLVPGAQIDGYVMIP-SNETVMAAWLAENGPIAIAVDASSFMSYQSGVLTS----CAGD 208

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A NH +++VGY     K G  +PYW++KNSWG DWGEK
Sbjct: 209 ALNHGVLLVGY----NKTG-GVPYWVIKNSWGEDWGEK 241



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 14/113 (12%)

Query: 87  AVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD 146
           A F + KFFDLS+++      LN  +     +      +   + D               
Sbjct: 3   ARFGITKFFDLSEAEFAARY-LNGAAYFAAAKQHAGQHYRKARADLSA------------ 49

Query: 147 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            +P+A DWR +G ++ VK QG C  CWAFSAVG +E+  A  G+ L  LS Q 
Sbjct: 50  -VPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQ 101


>gi|375073982|gb|AFA34858.1| cathepsin L-like protein [Trypanosoma dionisii]
          Length = 467

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 146/289 (50%), Gaps = 33/289 (11%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q + +VY S  +   R   F  N+  A+ + + +   A FGV  F DL+  + +      
Sbjct: 43  QRYGRVYKSAAEEAFRLSVFRKNLLDAKLHAAANP-HATFGVTPFSDLTREEFRSR---- 97

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
                     S  A F++ +     RA     +  GD  P A DWR  G ++ VK+QG+C
Sbjct: 98  --------HHSGAAHFAAGRK----RARVPVDVGVGD-APAAVDWRDRGAVTPVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGG 375
             CWAFSA+G VE    + GN+LT LS Q LV CD  + GC+GG M+ A ++I++  NG 
Sbjct: 145 GSCWAFSAIGNVEGQWFLAGNALTSLSEQMLVSCDTMDSGCDGGLMNSAFEWIVEHHNGT 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++++Y Y + +                +  + ++P  +E +M  W+A  GPL+V ++A
Sbjct: 205 VYTEESYRYASGDGIAQPCRTSGRTVGAVITGHVKLP-PDEAKMATWLAANGPLAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGE 472
           +   +Y+GGV        +D    L G     + PYWIVKNSWG+ WGE
Sbjct: 264 SSWMFYTGGVLTSCVSNELDHGVLLVGYNDSAAPPYWIVKNSWGTLWGE 312



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIID--NGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD  + GC+GG M+ A ++I++  NG V ++++Y Y + +         
Sbjct: 167 LTSLSEQMLVSCDTMDSGCDGGLMNSAFEWIVEHHNGTVYTEESYRYASGDGIAQPCRTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  + ++P  +E +M  W+A  GPL+V ++A+   +Y+GGV+      C    
Sbjct: 227 GRTVGAVITGHVKLP-PDEAKMATWLAANGPLAVAVDASSWMFYTGGVLTS----CVSNE 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  + PYWIVKNSWG+ WGE
Sbjct: 282 LDHGVLLVGY-----NDSAAPPYWIVKNSWGTLWGE 312



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 18/157 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
            ++F +F + + +VY S  +   R   F  N+  A+ +   +   A F V  F DL+  +
Sbjct: 35  ASQFADFKQRYGRVYKSAAEEAFRLSVFRKNLLDAKLHAAANP-HATFGVTPFSDLTREE 93

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +                S  A F++ +     RA     +  GD  P A DWR  G ++
Sbjct: 94  FRSR------------HHSGAAHFAAGRK----RARVPVDVGVGD-APAAVDWRDRGAVT 136

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG+C  CWAFSA+G VE    + GN LT LS Q
Sbjct: 137 PVKDQGQCGSCWAFSAIGNVEGQWFLAGNALTSLSEQ 173


>gi|312451836|gb|ADQ85985.1| actinidin [Actinidia chinensis]
          Length = 380

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 41/303 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + K Y+S+ +  RR E F   +   +++ ++ + +   G+N+F DL++ + +  T L   
Sbjct: 49  YGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRS-TYLGFT 107

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S              SN+T    R       R G  LP   DWR+ G +  +K QG+C  
Sbjct: 108 S-------------GSNKTKVSNRY----EPRVGQVLPSYVDWRSAGAVVDIKSQGECGG 150

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDNGGVV 377
           CWAFSA+  VE ++ I    L  LS Q+L+DC  +    GCNGG + D  Q+II+NGG+ 
Sbjct: 151 CWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGIN 210

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +++ YPY A + E  C V  +    V +  Y  +PY  E  ++  V T  P+SV ++A G
Sbjct: 211 TEENYPYTAQDGE--CNVDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAG 267

Query: 438 LFY--YSGGV--------IDLNQRL--YGT--SIPYWIVKNSWGSDWGE----KVEDKVG 479
             +  YS G+        ID    +  YGT   I YWIVKNSW + WGE    ++   VG
Sbjct: 268 DAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVG 327

Query: 480 SSG 482
            +G
Sbjct: 328 GAG 330



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 20/167 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +TGVL S    L+ ++L+DC  +    GCNGG + D  Q+II+NGG+ +++ YPY A + 
Sbjct: 167 VTGVLIS----LSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDG 222

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID 605
           E  C V  +    V +  Y  +PY  E  ++  V T  P+SV ++A G  +  YS G+  
Sbjct: 223 E--CNVDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKQYSSGIF- 278

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C   A +HA+ IVGYG E       I YWIVKNSW + WGE+
Sbjct: 279 --TGPCG-TAIDHAVTIVGYGTE-----GGIDYWIVKNSWDTTWGEE 317



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++  + K Y+S+ +  RR E F   +   +++  + + +    +N+F DL+D + + 
Sbjct: 42  YESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRS 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            T L   S              SN+T    R       R G  LP   DWR+ G +  +K
Sbjct: 102 -TYLGFTS-------------GSNKTKVSNRY----EPRVGQVLPSYVDWRSAGAVVDIK 143

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG+C  CWAFSA+  VE ++ I    L  LS Q
Sbjct: 144 SQGECGGCWAFSAIATVEGINKIVTGVLISLSEQ 177


>gi|179957|gb|AAC37592.1| cathepsin S [Homo sapiens]
          Length = 331

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 175 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDLK--CQY-DSKYRAATCSKYTELP 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 232 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 291

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 292 EYWLVKNSWGHNFGEE 307



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 158 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDLK--CQY 215

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 216 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 273 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQ 165


>gi|224135841|ref|XP_002327317.1| predicted protein [Populus trichocarpa]
 gi|222835687|gb|EEE74122.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 147/289 (50%), Gaps = 37/289 (12%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           KVY+   +  RR E F  NVE  E + +  +      VNKF DL+  +L+          
Sbjct: 47  KVYADAAEKERRFEIFKDNVEYIESFNTAGNKPYKLSVNKFADLTNEELKVA-------- 98

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
               +   + P  +     ++ +F++ ++     +P   DWR +G ++ +K+QG+C  CW
Sbjct: 99  ----RNGYRRPLQTR--PMKVTSFKYENVTA---VPATMDWRKKGAVTPIKDQGQCGSCW 149

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSD 379
           AFS V   E ++ +    L  LS Q+LVDCD    + GC GG M+D  ++II N G+ ++
Sbjct: 150 AFSTVAATEGINQLTTGKLVSLSEQELVDCDTQGEDQGCEGGLMEDGFEFIIKNHGITTE 209

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG-- 437
             YPY+A++    C   +E     K+  Y  +P   E  + K VA++ P+SV ++A G  
Sbjct: 210 ANYPYQAADGT--CNSKKEASRIAKITGYESVPANSEAALLKAVASQ-PISVSIDAGGSD 266

Query: 438 LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
             +YS GV       +L+  +    YG +     YW+VKNSWG+ WGE+
Sbjct: 267 FQFYSSGVFTGQCGTELDHGVTAVGYGETSDGTKYWLVKNSWGTSWGEE 315



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD    + GC GG M+D  ++II N G+ ++  YPY+A++    C   
Sbjct: 167 KLVSLSEQELVDCDTQGEDQGCEGGLMEDGFEFIIKNHGITTEANYPYQAADGT--CNSK 224

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +E     K+  Y  +P   E  + K VA++ P+SV ++A G    +YS GV       C 
Sbjct: 225 KEASRIAKITGYESVPANSEAALLKAVASQ-PISVSIDAGGSDFQFYSSGVFTGQ---CG 280

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG  E  DGT   YW+VKNSWG+ WGE+
Sbjct: 281 TEL-DHGVTAVGYG--ETSDGTK--YWLVKNSWGTSWGEE 315



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 17/156 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M    KVY+   +  RR E F  NVE  E +    +      VNKF DL++ +L+
Sbjct: 37  RHEQWMETFGKVYADAAEKERRFEIFKDNVEYIESFNTAGNKPYKLSVNKFADLTNEELK 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                         +   + P  +     ++ +F++ ++     +P   DWR +G ++ +
Sbjct: 97  VA------------RNGYRRPLQTR--PMKVTSFKYENVTA---VPATMDWRKKGAVTPI 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG+C  CWAFS V   E ++ +    L  LS Q 
Sbjct: 140 KDQGQCGSCWAFSTVAATEGINQLTTGKLVSLSEQE 175


>gi|356564325|ref|XP_003550405.1| PREDICTED: cysteine proteinase 15A [Glycine max]
          Length = 370

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 148/316 (46%), Gaps = 63/316 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R   F +N+ +A  +   D  +AV GV KF DL+
Sbjct: 50  LNAEHHFASFKAKFAKTYATKEEHDHRFGVFKSNLRRARLHAKLDP-SAVHGVTKFSDLT 108

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
            ++ + Q  GL     L     + +AP    +                 DLP+ FDWR +
Sbjct: 109 PAEFRRQFLGLK---PLRFPAHAQKAPILPTK-----------------DLPKDFDWRDK 148

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNG 356
           G ++ VK+QG C  CW+FS  G +E  H +    L  LS QQLVDCD           + 
Sbjct: 149 GAVTNVKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYGACDS 208

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M++A +YI+ +GGV  ++ YPY   +   G    ++      V  YS +   +E
Sbjct: 209 GCNGGLMNNAFEYILQSGGVQKEKDYPYTGRD---GTCKFDKTKVAATVSNYSVVSL-DE 264

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV---------IDLNQRLYG-----------TS 456
           E++   +   GPL+V +NA  +  Y GGV         +D    L G            +
Sbjct: 265 EQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFKN 324

Query: 457 IPYWIVKNSWGSDWGE 472
            PYWI+KNSWG  WGE
Sbjct: 325 KPYWIIKNSWGESWGE 340



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 18/166 (10%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M++A +YI+ +GGV  ++ YPY   + 
Sbjct: 182 ELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRD- 240

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    ++      V  YS +   +EE++   +   GPL+V +NA  +  Y GGV    
Sbjct: 241 --GTCKFDKTKVAATVSNYSVVSL-DEEQIAANLVKNGPLAVAINAVFMQTYVGGVS--C 295

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKD--GTSIPYWIVKNSWGSDWGE 651
             +C  K  +H +++VGYGE         + PYWI+KNSWG  WGE
Sbjct: 296 PYICG-KHLDHGVLLVGYGEGAYAPIRFKNKPYWIIKNSWGESWGE 340



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 22/156 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F +F     K Y++ E+   R   F +N+ +A  + + D  +AV  V KF DL+ ++ +
Sbjct: 55  HFASFKAKFAKTYATKEEHDHRFGVFKSNLRRARLHAKLDP-SAVHGVTKFSDLTPAEFR 113

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  GL     L     + +AP    +                 DLP+ FDWR +G ++ 
Sbjct: 114 RQFLGLK---PLRFPAHAQKAPILPTK-----------------DLPKDFDWRDKGAVTN 153

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG C  CW+FS  G +E  H +    L  LS Q
Sbjct: 154 VKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQ 189


>gi|343412462|emb|CCD21670.1| cysteine peptidase (CP), putative [Trypanosoma vivax Y486]
          Length = 367

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 141/293 (48%), Gaps = 39/293 (13%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG-- 255
           Q + + Y +  +   R   F  N+ ++  Y + +   A FGV  F DL+  + +      
Sbjct: 39  QKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRTRYHNG 97

Query: 256 -LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
             + ++    ++  +Q P                        P A DWR +G ++ VK+Q
Sbjct: 98  ERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVTPVKDQ 137

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--D 372
           G C  CW+FSA+G +E   A  GN LT LS Q LV CD  + GC GG MD+A ++I+  +
Sbjct: 138 GTCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKEN 197

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           +G V ++++YPY +   E              +  +  IP+ +E+ + K++A  GP++V 
Sbjct: 198 SGKVYTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPH-DEDAIAKYLADNGPVAVA 256

Query: 433 MNANGLFYYSGGVID------LNQRLY------GTSIPYWIVKNSWGSDWGEK 473
           ++A     YSGGV+       LN  +        +  PYWI+KNSW S WGEK
Sbjct: 257 VDATTFMSYSGGVVTSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEK 309



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD  + GC GG MD+A ++I+  ++G V ++++YPY +   E       
Sbjct: 163 LTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPR 222

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  IP+ +E+ + K++A  GP++V ++A     YSGGV+      C  +A
Sbjct: 223 GHKVGATITGHVDIPH-DEDAIAKYLADNGPVAVAVDATTFMSYSGGVVTS----CTSEA 277

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NH +++VGY +  K      PYWI+KNSW S WGEK
Sbjct: 278 LNHGVLLVGYNDSSKP-----PYWIIKNSWSSSWGEK 309



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 24/157 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F + + + Y +  +   R   F  N+ ++  Y   +   A F V  F DL+  + + 
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRT 92

Query: 105 LTG---LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                  + ++    ++  +Q P                        P A DWR +G ++
Sbjct: 93  RYHNGERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVT 132

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CW+FSA+G +E   A  GN LT LS Q
Sbjct: 133 PVKDQGTCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQ 169


>gi|330842703|ref|XP_003293312.1| hypothetical protein DICPUDRAFT_41833 [Dictyostelium purpureum]
 gi|325076376|gb|EGC30167.1| hypothetical protein DICPUDRAFT_41833 [Dictyostelium purpureum]
          Length = 352

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 160/328 (48%), Gaps = 36/328 (10%)

Query: 172 CWAFSA----VGVVEAMHAIQG--NNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAE 225
           C+ F A    + +  A   I G   +L     + + K+Y + E+  +R  NF TN++K E
Sbjct: 12  CFVFVAQSVNININNAYRTIDGPSKDLFHHWTKQNGKIYETSEEFEKRFSNFKTNLKKIE 71

Query: 226 DYQSEDSGTAVFGVNKFFDLSESDLQQLTGL-NLDSTLEDIQPSLQAPFSSNQTDTEMRA 284
           +  +   G A FG+NK+ DLSE +      + N     E+ +  ++ P   N +   +  
Sbjct: 72  NLNNLHKGKASFGMNKYSDLSEEEFSNFYLMKNFKGKPEEERDYIKKP--ENPSSNLIGG 129

Query: 285 FQFNSLRHGDDLPEAF--DWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTE 342
           +    L   D L   +  DWR +G+++ VK+QG+C  C+ FSA   +E+ +   G+    
Sbjct: 130 Y----LNTDDGLKAMYQVDWRNKGLVTPVKDQGQCGSCYIFSATEQIESEYIRAGHKAIL 185

Query: 343 LSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 402
           LS QQ VDCD  +GGC GG   +   YII  GGV +++ YPY A +   G          
Sbjct: 186 LSEQQSVDCDTMDGGCGGGDPANVYNYIISAGGVSTEKDYPYTAQD---GTCFNTTRAVS 242

Query: 403 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI---------------- 446
           +   +Y      +E+ +   +A  GP+S+ ++A+    Y+GG+I                
Sbjct: 243 ITGFQYVT-QNSDEDTLITTIANHGPVSICVDASTWQSYTGGIITTGCEQNIDHCVQVVG 301

Query: 447 -DLNQRLYGTSIPYWIVKNSWGSDWGEK 473
            D+++      IPY+I++NSWG+ WG+K
Sbjct: 302 LDIDKTDPSNPIPYYIIRNSWGTSWGDK 329



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 8/152 (5%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ ++ VDCD  +GGC GG   +   YII  GGV +++ YPY A +   G          
Sbjct: 186 LSEQQSVDCDTMDGGCGGGDPANVYNYIISAGGVSTEKDYPYTAQD---GTCFNTTRAVS 242

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           +   +Y      +E+ +   +A  GP+S+ ++A+    Y+GG+I      C     +H +
Sbjct: 243 ITGFQYVT-QNSDEDTLITTIANHGPVSICVDASTWQSYTGGIITTG---CEQNI-DHCV 297

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +VG   ++      IPY+I++NSWG+ WG+K
Sbjct: 298 QVVGLDIDKTDPSNPIPYYIIRNSWGTSWGDK 329



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 9/158 (5%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F ++ + + K+Y + E+  +R  NF TN++K E+      G A F +NK+ DLS+ +   
Sbjct: 39  FHHWTKQNGKIYETSEEFEKRFSNFKTNLKKIENLNNLHKGKASFGMNKYSDLSEEEFSN 98

Query: 105 LTGL-NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAF--DWRAEGVIS 161
              + N     E+ +  ++ P   N +   +  +    L   D L   +  DWR +G+++
Sbjct: 99  FYLMKNFKGKPEEERDYIKKP--ENPSSNLIGGY----LNTDDGLKAMYQVDWRNKGLVT 152

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            VK+QG+C  C+ FSA   +E+ +   G+    LS Q 
Sbjct: 153 PVKDQGQCGSCYIFSATEQIESEYIRAGHKAILLSEQQ 190


>gi|194757786|ref|XP_001961143.1| GF13722 [Drosophila ananassae]
 gi|190622441|gb|EDV37965.1| GF13722 [Drosophila ananassae]
          Length = 417

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 134/261 (51%), Gaps = 43/261 (16%)

Query: 237 FGVNKFFDLSESDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDD 295
             VNK+ D+   + +QL  G N       +   L+A       D   +   F S  H   
Sbjct: 152 LAVNKYADMLHHEFRQLMNGFNYT-----LHKELRA------ADESFKGVTFISPEH-VT 199

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR +G ++ VK+QG C  CWAFS+ G +E  H  +   L  LS Q LVDC    
Sbjct: 200 LPKSVDWRDKGAVTGVKDQGHCGSCWAFSSTGALEGQHYRKSGVLVSLSEQNLVDCSTKY 259

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYS 409
            N GCNGG MD+A +YI DNGG+ ++++YPY+A +      +G +   + GF        
Sbjct: 260 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEALDDSCHFNKGTIGATDRGF-------V 312

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV-----IDLNQRLYGTSI----- 457
            IP G E+++ + VAT GP+SV ++A+     +YS GV      D     +G  +     
Sbjct: 313 DIPQGNEKKLAEAVATIGPVSVAIDASHESFQFYSEGVYVEPACDAQNLDHGVLVVGFGT 372

Query: 458 -----PYWIVKNSWGSDWGEK 473
                 YW+VKNSWG+ WG+K
Sbjct: 373 DESGQDYWLVKNSWGTTWGDK 393



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 101/170 (59%), Gaps = 25/170 (14%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +GVL S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +  
Sbjct: 241 SGVLVS----LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEALDDS 296

Query: 549 ----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGG 602
               +G +   + GF         IP G E+++ + VAT GP+SV ++A+     +YS G
Sbjct: 297 CHFNKGTIGATDRGF-------VDIPQGNEKKLAEAVATIGPVSVAIDASHESFQFYSEG 349

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           V    +  C+ +  +H +++VG+G +E    +   YW+VKNSWG+ WG+K
Sbjct: 350 V--YVEPACDAQNLDHGVLVVGFGTDE----SGQDYWLVKNSWGTTWGDK 393



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 13/110 (11%)

Query: 91  VNKFFDLSDSDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLP 149
           VNK+ D+   + +QL  G N       +   L+A       D   +   F S  H   LP
Sbjct: 154 VNKYADMLHHEFRQLMNGFNYT-----LHKELRA------ADESFKGVTFISPEH-VTLP 201

Query: 150 EAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++ DWR +G ++ VK+QG C  CWAFS+ G +E  H  +   L  LS Q+
Sbjct: 202 KSVDWRDKGAVTGVKDQGHCGSCWAFSSTGALEGQHYRKSGVLVSLSEQN 251


>gi|124484401|dbj|BAF46311.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 339

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 143/295 (48%), Gaps = 41/295 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQLTG 255
           +  + +VY +  +  +R+  F  NVE  E +    +     G+N F DL+  + +    G
Sbjct: 41  MAQYGRVYKNEVEKTKRYNIFKENVEYIESFNKAGTKPYKLGINAFADLTNKEFIASRNG 100

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
             L        P                 F++ ++     +P   DWR +G ++ VK+QG
Sbjct: 101 YILPHECSSNTP-----------------FRYENVSA---VPTTVDWRKKGAVTPVKDQG 140

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDN 373
           +C CCWAFSAV  +E +  +   +L  LS Q+LVDCD+   + GC GG MDDA  +II+N
Sbjct: 141 QCGCCWAFSAVAAMEGITKLSTGNLISLSEQELVDCDVKGIDQGCEGGLMDDAFTFIINN 200

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++  YPY+ ++    C   +      K+  Y  +P   E  ++K VA + P+SV +
Sbjct: 201 KGLTTESNYPYQGTDGS--CKKSKSSNSAAKISGYEDVPANSESALEKAVANQ-PVSVAI 257

Query: 434 NANG--LFYYSGGV--------IDLNQRLYGTSIP-----YWIVKNSWGSDWGEK 473
           +A G    +YS GV        +D      G  I      YW+VKNSWG+ WGEK
Sbjct: 258 DAGGSDFQFYSSGVFTGECGTELDHGVTAVGYGIAEDGSKYWLVKNSWGTSWGEK 312



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +    L  L+ ++LVDCD+   + GC GG MDDA  +II+N G+ ++  YPY+ ++ 
Sbjct: 157 ITKLSTGNLISLSEQELVDCDVKGIDQGCEGGLMDDAFTFIINNKGLTTESNYPYQGTDG 216

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C   +      K+  Y  +P   E  ++K VA + P+SV ++A G    +YS GV  
Sbjct: 217 S--CKKSKSSNSAAKISGYEDVPANSESALEKAVANQ-PVSVAIDAGGSDFQFYSSGVFT 273

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H +  VGYG  E  DG+   YW+VKNSWG+ WGEK
Sbjct: 274 GE---CGTEL-DHGVTAVGYGIAE--DGSK--YWLVKNSWGTSWGEK 312



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 33/188 (17%)

Query: 20  FMIKVALLESNIFQTRGYLNSPVT--------RFLNFMRDHDKVYSSVEDLLRRHENFVT 71
            +I +AL    +F T  YL +  T        R   +M  + +VY +  +  +R+  F  
Sbjct: 8   LLIALAL----VFATSAYLATSRTLLDSLMAVRHEQWMAQYGRVYKNEVEKTKRYNIFKE 63

Query: 72  NVEKAEDYQREDSGTAVFEVNKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQT 130
           NVE  E + +  +      +N F DL++ + +    G  L        P           
Sbjct: 64  NVEYIESFNKAGTKPYKLGINAFADLTNKEFIASRNGYILPHECSSNTP----------- 112

Query: 131 DTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGN 190
                 F++ ++     +P   DWR +G ++ VK+QG+C CCWAFSAV  +E +  +   
Sbjct: 113 ------FRYENVSA---VPTTVDWRKKGAVTPVKDQGQCGCCWAFSAVAAMEGITKLSTG 163

Query: 191 NLTELSVQ 198
           NL  LS Q
Sbjct: 164 NLISLSEQ 171


>gi|401416326|ref|XP_003872658.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|14348750|emb|CAC41275.1| CPB2 protein [Leishmania mexicana]
 gi|322488882|emb|CBZ24132.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 359

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 144/289 (49%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG+C  
Sbjct: 103 AYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGECGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFS+VG +E    + G+ L  LS QQLV CD  N GC+GG M  A  +++   NG + 
Sbjct: 150 CWAFSSVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLY 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +       C    E     ++  +  I    E+ M  W+A  GP+++ ++A+
Sbjct: 210 TEDSYPYVSGNGYLPECSNSSELVVGAQIDSHVLIG-SSEKAMAAWLAKNGPIAIALDAS 268

Query: 437 GLFYYSGGVI------DLNQRLYGTS------IPYWIVKNSWGSDWGEK 473
               Y  GV+      ++N  +          +PYW++KNSWG DWGE+
Sbjct: 269 SFMSYKSGVLTACIGKEVNHAVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L  L+ ++LV CD  N GC+GG M  A  +++ N  G + ++ +YPY +       C  
Sbjct: 169 ELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYLPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  +  I    E+ M  W+A  GP+++ ++A+    Y  GV+      C  
Sbjct: 229 SSELVVGAQIDSHVLIG-SSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
           K  NHA+++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 284 KEVNHAVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAA 96

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              LN  +     +      +   + D                +P+A DWR +G ++ VK
Sbjct: 97  RY-LNGAAYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG+C  CWAFS+VG +E    + G+ L  LS Q
Sbjct: 143 DQGECGSCWAFSSVGNIEGQWYLAGHELVSLSEQ 176


>gi|256077197|ref|XP_002574894.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230780|emb|CCD77197.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 419

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 146/290 (50%), Gaps = 39/290 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + K Y   ED +R    F +N+ KA+ YQ  + G+A++GV  + DL+  +  +       
Sbjct: 127 YRKQYHETEDEIR-FNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTTDEFAR------- 178

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                +  S   P S + T T +        +  +++P+ FDWR +G +++VK QG C  
Sbjct: 179 ---THLTASWVVPSSRSNTPTSLG-------KEVNNIPKNFDWREKGAVTEVKNQGMCGS 228

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFS  G VE+    +   L  LS QQLVDCD  + GCNGG   +A + II  GG++ +
Sbjct: 229 CWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGLPSNAYESIIKMGGLMLE 288

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
             YPY A ++E+  L  + +G  V +     +   +E E+  W+     +SVGMNA  L 
Sbjct: 289 DNYPYDA-KNEKCHL--KTDGVAVYINSSVNLT-QDETELAAWLYHNSTISVGMNALLLQ 344

Query: 440 YYSGGV------------IDLNQRLYGTSI-----PYWIVKNSWGSDWGE 472
           +Y  G+            +D    L G  +     P+WIVKNSWG +WGE
Sbjct: 345 FYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGE 394



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 8/155 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GCNGG   +A + II  GG++ +  YPY A ++E+  L  + 
Sbjct: 248 KLLSLSEQQLVDCDGLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDA-KNEKCHL--KT 304

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           +G  V +     +   +E E+  W+     +SVGMNA  L +Y  G+       C+    
Sbjct: 305 DGVAVYINSSVNLT-QDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLL 363

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +HA+++VGYG  EK +    P+WIVKNSWG +WGE
Sbjct: 364 DHAVLLVGYGVSEKNE----PFWIVKNSWGVEWGE 394



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 23/183 (12%)

Query: 22  IKVALLESNIFQTRGYLNSPVT-----RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA 76
           + +A L   + +  GYL   +      +++ F   + K Y   ED +R    F +N+ KA
Sbjct: 92  VSIAHLGPCLLKAYGYLGFKLPGNVDEKYVQFKLKYRKQYHETEDEIR-FNIFKSNILKA 150

Query: 77  EDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRA 136
           + YQ  + G+A++ V  + DL+  +  +            +  S   P S + T T +  
Sbjct: 151 QLYQVFERGSAIYGVTPYSDLTTDEFAR----------THLTASWVVPSSRSNTPTSLG- 199

Query: 137 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELS 196
                 +  +++P+ FDWR +G +++VK QG C  CWAFS  G VE+    +   L  LS
Sbjct: 200 ------KEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLS 253

Query: 197 VQH 199
            Q 
Sbjct: 254 EQQ 256


>gi|402585860|gb|EJW79799.1| cysteine protease 6 [Wuchereria bancrofti]
          Length = 242

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 113/206 (54%), Gaps = 21/206 (10%)

Query: 284 AFQFNSLRHG-DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTE 342
           AF  N      D+LP  FDW  +GV++ VK QG C  CWAFS  G +E++ AI+  +L  
Sbjct: 16  AFNLNDFNLSIDNLPNKFDWNTKGVVTPVKNQGSCGSCWAFSVTGNIESLWAIKTGNLIS 75

Query: 343 LSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 402
           LS Q+L+DCD+ + GCNGG   +A + I   GG+  +  YPYKA      C +   +   
Sbjct: 76  LSEQELIDCDVIDNGCNGGLPINAFREIKRMGGLEPEDQYPYKAKNGT--CHLVRAQ-IA 132

Query: 403 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI----------DLNQRL 452
           V + +   IP   E  MK W+A RGPLSVG++A  L YY  G++           +N  +
Sbjct: 133 VTIDDAIEIPR-NETVMKAWIAQRGPLSVGIDAELLAYYKSGILHPSKSRCPPSKINHGV 191

Query: 453 ----YG--TSIPYWIVKNSWGSDWGE 472
               YG    +PYW +KNSWG +WGE
Sbjct: 192 LITGYGIENGLPYWTIKNSWGEEWGE 217



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 99/192 (51%), Gaps = 20/192 (10%)

Query: 462 VKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPSKLSRLATEKLVDCDMSNGGCNGG 519
           VKN  S GS W   V   + S         L  +    L  L+ ++L+DCD+ + GCNGG
Sbjct: 44  VKNQGSCGSCWAFSVTGNIES---------LWAIKTGNLISLSEQELIDCDVIDNGCNGG 94

Query: 520 RMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKK 579
              +A + I   GG+  +  YPYKA      C +   +   V + +   IP   E  MK 
Sbjct: 95  LPINAFREIKRMGGLEPEDQYPYKAKNGT--CHLVRAQ-IAVTIDDAIEIPR-NETVMKA 150

Query: 580 WVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYW 639
           W+A RGPLSVG++A  L YY  G++  ++  C P   NH ++I GYG E       +PYW
Sbjct: 151 WIAQRGPLSVGIDAELLAYYKSGILHPSKSRCPPSKINHGVLITGYGIE-----NGLPYW 205

Query: 640 IVKNSWGSDWGE 651
            +KNSWG +WGE
Sbjct: 206 TIKNSWGEEWGE 217



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 136 AFQFNSLRHG-DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTE 194
           AF  N      D+LP  FDW  +GV++ VK QG C  CWAFS  G +E++ AI+  NL  
Sbjct: 16  AFNLNDFNLSIDNLPNKFDWNTKGVVTPVKNQGSCGSCWAFSVTGNIESLWAIKTGNLIS 75

Query: 195 LSVQ 198
           LS Q
Sbjct: 76  LSEQ 79


>gi|121308860|dbj|BAF43527.1| cysteine proteinase [Zinnia elegans]
          Length = 352

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 156/298 (52%), Gaps = 36/298 (12%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           +L E  +  H K Y S+++ L R E F+ N++  ++   + S   + G+N+F DL+  + 
Sbjct: 47  HLFESWLVKHSKFYESLDEKLHRFEIFMDNLKHIDETNKKVSNYWL-GLNEFADLTHEEF 105

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +    L     L            + + D   + F +   R   DLP++ DWR +G ++ 
Sbjct: 106 KH-KFLGFKGEL------------AERKDESSKEFGY---RDFVDLPKSVDWRKKGAVAP 149

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQY 369
           VK QG+C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A  Y
Sbjct: 150 VKNQGQCGNCWAFSTVAAVEGINQIVTGNLTMLSEQELIDCDTTFNNGCNGGLMDYAFAY 209

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           ++   G+  ++ YPY  SE    C   ++   KV +  Y  +P  +E    K +A + P+
Sbjct: 210 VM-RSGLHKEEEYPYIMSEGT--CDEKKDVSEKVTISGYHDVPRNDEASFLKALANQ-PI 265

Query: 430 SVGMNANG--LFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           SV + A+G    +YSGGV D      L+  +    YGT+  + Y IV+NSWG  WGEK
Sbjct: 266 SVAIEASGRDFQFYSGGVFDGHCGTELDHGVAAVGYGTTKGLDYVIVRNSWGPKWGEK 323



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 16/163 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++L+DCD + N GCNGG MD A  Y++   G+  ++ YPY  SE    C
Sbjct: 174 IVTGNLTMLSEQELIDCDTTFNNGCNGGLMDYAFAYVM-RSGLHKEEEYPYIMSEGT--C 230

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              ++   KV +  Y  +P  +E    K +A + P+SV + A+G    +YSGGV D +  
Sbjct: 231 DEKKDVSEKVTISGYHDVPRNDEASFLKALANQ-PISVAIEASGRDFQFYSGGVFDGH-- 287

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H +  VGYG  +  D     Y IV+NSWG  WGEK
Sbjct: 288 -CGTEL-DHGVAAVGYGTTKGLD-----YVIVRNSWGPKWGEK 323



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 17/161 (10%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           ++  +  F +++  H K Y S+++ L R E F+ N++  ++  ++ S   +  +N+F DL
Sbjct: 42  IHKVIHLFESWLVKHSKFYESLDEKLHRFEIFMDNLKHIDETNKKVSNYWL-GLNEFADL 100

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           +  + +    L     L            + + D   + F +   R   DLP++ DWR +
Sbjct: 101 THEEFKH-KFLGFKGEL------------AERKDESSKEFGY---RDFVDLPKSVDWRKK 144

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G ++ VK QG+C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 145 GAVAPVKNQGQCGNCWAFSTVAAVEGINQIVTGNLTMLSEQ 185


>gi|2144501|pir||TAGB actinidain (EC 3.4.22.14) precursor - kiwi fruit
 gi|166317|gb|AAA32629.1| actinidin [Actinidia deliciosa]
          Length = 380

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 41/303 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + K Y+S+ +  RR E F   +   +++ ++ + +   G+N+F DL++ + +  T L   
Sbjct: 49  YGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRS-TYLGFT 107

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S              SN+T    R       R G  LP   DWR+ G +  +K QG+C  
Sbjct: 108 S-------------GSNKTKVSNRY----EPRVGQVLPSYVDWRSAGAVVDIKSQGECGG 150

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDNGGVV 377
           CWAFSA+  VE ++ I    L  LS Q+L+DC  +    GCNGG + D  Q+II+NGG+ 
Sbjct: 151 CWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGIN 210

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +++ YPY A + E  C V  +    V +  Y  +PY  E  ++  V T  P+SV ++A G
Sbjct: 211 TEENYPYTAQDGE--CNVELQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAG 267

Query: 438 LFY--YSGGV--------IDLNQRL--YGT--SIPYWIVKNSWGSDWGE----KVEDKVG 479
             +  YS G+        ID    +  YGT   I YWIVKNSW + WGE    ++   VG
Sbjct: 268 DAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVG 327

Query: 480 SSG 482
            +G
Sbjct: 328 GAG 330



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 20/167 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +TGVL S    L+ ++L+DC  +    GCNGG + D  Q+II+NGG+ +++ YPY A + 
Sbjct: 167 VTGVLIS----LSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDG 222

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID 605
           E  C V  +    V +  Y  +PY  E  ++  V T  P+SV ++A G  +  YS G+  
Sbjct: 223 E--CNVELQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKQYSSGIF- 278

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C   A +HA+ IVGYG E       I YWIVKNSW + WGE+
Sbjct: 279 --TGPCG-TAIDHAVTIVGYGTE-----GGIDYWIVKNSWDTTWGEE 317



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++  + K Y+S+ +  RR E F   +   +++  + + +    +N+F DL+D + + 
Sbjct: 42  YESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRS 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            T L   S              SN+T    R       R G  LP   DWR+ G +  +K
Sbjct: 102 -TYLGFTS-------------GSNKTKVSNRY----EPRVGQVLPSYVDWRSAGAVVDIK 143

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG+C  CWAFSA+  VE ++ I    L  LS Q 
Sbjct: 144 SQGECGGCWAFSAIATVEGINKIVTGVLISLSEQE 178


>gi|334185815|ref|NP_680113.3| putative cysteine proteinase [Arabidopsis thaliana]
 gi|75313879|sp|Q9STL4.1|CEP2_ARATH RecName: Full=KDEL-tailed cysteine endopeptidase CEP2; Flags:
           Precursor
 gi|4678354|emb|CAB41164.1| cysteine endopeptidase-like protein [Arabidopsis thaliana]
 gi|332644882|gb|AEE78403.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 361

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 163/320 (50%), Gaps = 37/320 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTGLNL 258
           H  V  S+ +  +R   F  NV    +   ++  +    +NKF DL+ ++ +   TG N+
Sbjct: 44  HHSVPRSLNEREKRFNVFRHNVMHVHNTNKKNR-SYKLKLNKFADLTINEFKNAYTGSNI 102

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                     LQ P   +      + F ++   +   LP + DWR +G ++++K QGKC 
Sbjct: 103 KH-----HRMLQGPKRGS------KQFMYDH-ENLSKLPSSVDWRKKGAVTEIKNQGKCG 150

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVV 377
            CWAFS V  VE ++ I+ N L  LS Q+LVDCD   N GCNGG M+ A ++I  NGG+ 
Sbjct: 151 SCWAFSTVAAVEGINKIKTNKLVSLSEQELVDCDTKQNEGCNGGLMEIAFEFIKKNGGIT 210

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++ +YPY+  + +  C   ++ G  V +  +  +P  +E  + K VA + P+SV ++A  
Sbjct: 211 TEDSYPYEGIDGK--CDASKDNGVLVTIDGHEDVPENDENALLKAVANQ-PVSVAIDAGS 267

Query: 438 --LFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE----KVEDKVG 479
               +YS GV       +LN  +    YG+     YWIV+NSWG++WGE    K+E ++ 
Sbjct: 268 SDFQFYSEGVFTGSCGTELNHGVAAVGYGSERGKKYWIVRNSWGAEWGEGGYIKIEREID 327

Query: 480 SSGNRTRDLELTGVLPSKLS 499
               R   + +    P KLS
Sbjct: 328 EPEGRC-GIAMEASYPIKLS 346



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +  +KL  L+ ++LVDCD   N GCNGG M+ A ++I  NGG+ ++ +YPY+  + +
Sbjct: 164 INKIKTNKLVSLSEQELVDCDTKQNEGCNGGLMEIAFEFIKKNGGITTEDSYPYEGIDGK 223

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C   ++ G  V +  +  +P  +E  + K VA + P+SV ++A      +YS GV   
Sbjct: 224 --CDASKDNGVLVTIDGHEDVPENDENALLKAVANQ-PVSVAIDAGSSDFQFYSEGVFTG 280

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +   C  +  NH +  VGYG E  K      YWIV+NSWG++WGE
Sbjct: 281 S---CGTEL-NHGVAAVGYGSERGK-----KYWIVRNSWGAEWGE 316



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 14/150 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ-LTGL 108
           R H  V  S+ +  +R   F  NV    +  +++  +   ++NKF DL+ ++ +   TG 
Sbjct: 42  RSHHSVPRSLNEREKRFNVFRHNVMHVHNTNKKNR-SYKLKLNKFADLTINEFKNAYTGS 100

Query: 109 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 168
           N+          LQ P   +      + F ++   +   LP + DWR +G ++++K QGK
Sbjct: 101 NIKH-----HRMLQGPKRGS------KQFMYDH-ENLSKLPSSVDWRKKGAVTEIKNQGK 148

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           C  CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 149 CGSCWAFSTVAAVEGINKIKTNKLVSLSEQ 178


>gi|2507252|sp|P14080.2|PAPA2_CARPA RecName: Full=Chymopapain; AltName: Full=Papaya proteinase II;
           Short=PPII; Flags: Precursor
 gi|1332461|emb|CAA66378.1| chymopapain [Carica papaya]
          Length = 352

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 34/288 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H+K+Y S+++ + R E F  N+   ++   +++ +   G+N F DLS  + ++     + 
Sbjct: 55  HNKIYESIDEKIYRFEIFRDNLMYIDETNKKNN-SYWLGLNGFADLSNDEFKKKY---VG 110

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
              ED             T  E    +  + +H  + P++ DWRA+G ++ VK QG C  
Sbjct: 111 FVAEDF------------TGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGS 158

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFS +  VE ++ I   +L ELS Q+LVDCD  + GC GG    +LQY+ +N GV + 
Sbjct: 159 CWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANN-GVHTS 217

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
           + YPY+A + +  C   ++ G KVK+  Y R+P   E      +A + PLSV + A G  
Sbjct: 218 KVYPYQAKQYK--CRATDKPGPKVKITGYKRVPSNCETSFLGALANQ-PLSVLVEAGGKP 274

Query: 440 Y--YSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           +  Y  GV D      L+  +    YGTS    Y I+KNSWG +WGEK
Sbjct: 275 FQLYKSGVFDGPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEK 322



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  ++   L  L+ ++LVDCD  + GC GG    +LQY+ +N GV + + YPY+A + + 
Sbjct: 171 INKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANN-GVHTSKVYPYQAKQYK- 228

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLN 607
            C   ++ G KVK+  Y R+P   E      +A + PLSV + A G  +  Y  GV D  
Sbjct: 229 -CRATDKPGPKVKITGYKRVPSNCETSFLGALANQ-PLSVLVEAGGKPFQLYKSGVFD-- 284

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              C  K  +HA+  VGYG  + K+     Y I+KNSWG +WGEK
Sbjct: 285 -GPCGTKL-DHAVTAVGYGTSDGKN-----YIIIKNSWGPNWGEK 322



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 23/190 (12%)

Query: 16  YLHTFMIKVALLESNIFQTRGYLNSPVTR-------FLNFMRDHDKVYSSVEDLLRRHEN 68
           +L T +I    L S  F T GY    +T        F ++M  H+K+Y S+++ + R E 
Sbjct: 12  FLATCLIIHMGLSSADFYTVGYSQDDLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEI 71

Query: 69  FVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSN 128
           F  N+   ++  ++++ +    +N F DLS+ + ++     +    ED            
Sbjct: 72  FRDNLMYIDETNKKNN-SYWLGLNGFADLSNDEFKKKY---VGFVAEDF----------- 116

Query: 129 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
            T  E    +  + +H  + P++ DWRA+G ++ VK QG C  CWAFS +  VE ++ I 
Sbjct: 117 -TGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIV 175

Query: 189 GNNLTELSVQ 198
             NL ELS Q
Sbjct: 176 TGNLLELSEQ 185


>gi|315364646|pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An
           Aldehyde Warhead
 gi|315364647|pdb|3OVX|B Chain B, Cathepsin S In Complex With A Covalent Inhibitor With An
           Aldehyde Warhead
          Length = 218

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 2   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 61

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 62  YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 118

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 119 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 178

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 179 EYWLVKNSWGHNFGEE 194



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 45  KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 102

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 103 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 159

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 160 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 194



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 2   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 53


>gi|303275866|ref|XP_003057227.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461579|gb|EEH58872.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 329

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 154/327 (47%), Gaps = 54/327 (16%)

Query: 197 VQHHDKVYSS-VEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG 255
           V  H K Y+S  ++  +R E F  N+ +A++  + D   A +G   F DL+E +      
Sbjct: 12  VLEHGKTYASDAKEYAKRLEIFAENMARAKEMSARDG--AEYGATPFADLTEDEFAS--- 66

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH--GDDLPEAFDWRAEGVISKVKE 313
               S L      ++ P  + + +   R      L H   +++P  FDWRA G ++ VK 
Sbjct: 67  ----SLL------MREPIDAARVERLKRHESSRVLPHLPTENIPLNFDWRALGAVTPVKN 116

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMD 364
           QG C  CW+FSA G VE  H ++  +L  LS QQLVDCD +         + GC+GG   
Sbjct: 117 QGMCGSCWSFSATGAVEGAHFVKSGALVSLSEQQLVDCDHTCDPDSGTACDSGCDGGLPA 176

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
           +A+ Y++  GG+ ++ AYPY  +  +  C   E+      +  YS +   +E ++   + 
Sbjct: 177 NAMAYVVKRGGLDAEAAYPYLGARGDGRCKSKEDGPPAATITNYSFVS-ADESQIAAALV 235

Query: 425 TRGPLSVGMNANGLFYYSGGV-----IDLNQRLYGTSI-----------------PYWIV 462
             GPLSVG++A  +  Y  GV      D  +  +G  I                 P+W++
Sbjct: 236 KHGPLSVGIDARWMQLYRRGVACPWACDKTRLDHGVLIVGFGAEGRAPARGFRREPFWLI 295

Query: 463 KNSWGSDWGE----KVEDKVGSSGNRT 485
           KNSWG+ WGE    K+    GS G  T
Sbjct: 296 KNSWGARWGEEGYYKICKDKGSCGVNT 322



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 15/167 (8%)

Query: 498 LSRLATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           L  L+ ++LVDCD +         + GC+GG   +A+ Y++  GG+ ++ AYPY  +  +
Sbjct: 143 LVSLSEQQLVDCDHTCDPDSGTACDSGCDGGLPANAMAYVVKRGGLDAEAAYPYLGARGD 202

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
             C   E+      +  YS +   +E ++   +   GPLSVG++A  +  Y  GV     
Sbjct: 203 GRCKSKEDGPPAATITNYSFVS-ADESQIAAALVKHGPLSVGIDARWMQLYRRGVA--CP 259

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSI---PYWIVKNSWGSDWGEK 652
             C+    +H ++IVG+G E +         P+W++KNSWG+ WGE+
Sbjct: 260 WACDKTRLDHGVLIVGFGAEGRAPARGFRREPFWLIKNSWGARWGEE 306



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 18/158 (11%)

Query: 45  FLNFMRDHDKVYSS-VEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           F  F+ +H K Y+S  ++  +R E F  N+ +A++    D   A +    F DL++ +  
Sbjct: 8   FDAFVLEHGKTYASDAKEYAKRLEIFAENMARAKEMSARDG--AEYGATPFADLTEDEFA 65

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH--GDDLPEAFDWRAEGVIS 161
                   S L      ++ P  + + +   R      L H   +++P  FDWRA G ++
Sbjct: 66  S-------SLL------MREPIDAARVERLKRHESSRVLPHLPTENIPLNFDWRALGAVT 112

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            VK QG C  CW+FSA G VE  H ++   L  LS Q 
Sbjct: 113 PVKNQGMCGSCWSFSATGAVEGAHFVKSGALVSLSEQQ 150


>gi|93279396|pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent
           2-(Benzoxazol-2-Ylamino)- Acetamide
 gi|93279397|pdb|2F1G|B Chain B, Cathepsin S In Complex With Non-Covalent
           2-(Benzoxazol-2-Ylamino)- Acetamide
 gi|114794366|pdb|2HH5|B Chain B, Crystal Structure Of Cathepsin S In Complex With A Zinc
           Mediated Non-Covalent Arylaminoethyl Amide
 gi|114794367|pdb|2HH5|A Chain A, Crystal Structure Of Cathepsin S In Complex With A Zinc
           Mediated Non-Covalent Arylaminoethyl Amide
 gi|118137884|pdb|2H7J|A Chain A, Crystal Structure Of Cathepsin S In Complex With A
           Nonpeptidic Inhibitor.
 gi|118137885|pdb|2H7J|B Chain B, Crystal Structure Of Cathepsin S In Complex With A
           Nonpeptidic Inhibitor.
 gi|118138002|pdb|2HXZ|A Chain A, Crystal Structure Of Cathepsin S In Complex With A
           Nonpeptidic Inhibitor (hexagonal Spacegroup)
 gi|118138003|pdb|2HXZ|B Chain B, Crystal Structure Of Cathepsin S In Complex With A
           Nonpeptidic Inhibitor (hexagonal Spacegroup)
 gi|118138004|pdb|2HXZ|C Chain C, Crystal Structure Of Cathepsin S In Complex With A
           Nonpeptidic Inhibitor (hexagonal Spacegroup)
 gi|149241966|pdb|2HHN|A Chain A, Cathepsin S In Complex With Non Covalent Arylaminoethyl
           Amide.
 gi|149241967|pdb|2HHN|B Chain B, Cathepsin S In Complex With Non Covalent Arylaminoethyl
           Amide.
 gi|149242657|pdb|2OP3|A Chain A, The Structure Of Cathepsin S With A Novel 2-
           Arylphenoxyacetaldehyde Inhibitor Derived By The
           Substrate Activity Screening (Sas) Method
 gi|149242658|pdb|2OP3|B Chain B, The Structure Of Cathepsin S With A Novel 2-
           Arylphenoxyacetaldehyde Inhibitor Derived By The
           Substrate Activity Screening (Sas) Method
          Length = 220

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 4   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 63

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 64  YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 120

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 121 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 180

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 181 EYWLVKNSWGHNFGEE 196



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 47  KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 104

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 105 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 161

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 162 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 196



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 4   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 55


>gi|256077193|ref|XP_002574892.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230781|emb|CCD77198.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 457

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 151/302 (50%), Gaps = 42/302 (13%)

Query: 191 NLTELSVQH---HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSE 247
           N+ E  VQ    + K Y   ED +R    F +N+ KA+ YQ  + G+A++GV  + DL+ 
Sbjct: 153 NVDEKYVQFKLKYRKQYHETEDEIR-FNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 211

Query: 248 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 307
            +  +            +  S   P S + T T +        +  +++P+ FDWR +G 
Sbjct: 212 DEFAR----------THLTASWVVPSSRSNTPTSLG-------KEVNNIPKNFDWREKGA 254

Query: 308 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDAL 367
           +++VK QG C  CWAFS  G VE+    +   L  LS QQLVDCD  + GCNGG   +A 
Sbjct: 255 VTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGLPSNAY 314

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           + II  GG++ +  YPY A ++E+  L  + +G  V +     +   +E E+  W+    
Sbjct: 315 ESIIKMGGLMLEDNYPYDA-KNEKCHL--KTDGVAVYINSSVNLT-QDETELAAWLYHNS 370

Query: 428 PLSVGMNANGLFYYSGGV------------IDLNQRLYGTSI-----PYWIVKNSWGSDW 470
            +SVGMNA  L +Y  G+            +D    L G  +     P+WIVKNSWG +W
Sbjct: 371 TISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEW 430

Query: 471 GE 472
           GE
Sbjct: 431 GE 432



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 8/155 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GCNGG   +A + II  GG++ +  YPY A ++E+  L  + 
Sbjct: 286 KLLSLSEQQLVDCDGLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDA-KNEKCHL--KT 342

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           +G  V +     +   +E E+  W+     +SVGMNA  L +Y  G+       C+    
Sbjct: 343 DGVAVYINSSVNLT-QDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLL 401

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +HA+++VGYG  EK +    P+WIVKNSWG +WGE
Sbjct: 402 DHAVLLVGYGVSEKNE----PFWIVKNSWGVEWGE 432



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 18/156 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +++ F   + K Y   ED +R    F +N+ KA+ YQ  + G+A++ V  + DL+  +  
Sbjct: 157 KYVQFKLKYRKQYHETEDEIR-FNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTTDEFA 215

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +            +  S   P S + T T +        +  +++P+ FDWR +G +++V
Sbjct: 216 R----------THLTASWVVPSSRSNTPTSLG-------KEVNNIPKNFDWREKGAVTEV 258

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CWAFS  G VE+    +   L  LS Q 
Sbjct: 259 KNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQ 294


>gi|300508731|pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As
           Cathepsin S Inhibitors: N3, Not N1 Is Critically
           Important
 gi|300508732|pdb|3N3G|B Chain B, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As
           Cathepsin S Inhibitors: N3, Not N1 Is Critically
           Important
 gi|327533626|pdb|3N4C|A Chain A, 6-Phenyl-1h-Imidazo[4,5-C]pyridine-4-Carbonitrile As
           Cathepsin S Inhibitors
 gi|327533627|pdb|3N4C|B Chain B, 6-Phenyl-1h-Imidazo[4,5-C]pyridine-4-Carbonitrile As
           Cathepsin S Inhibitors
          Length = 217

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 60

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 61  YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 117

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 118 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 177

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 178 EYWLVKNSWGHNFGEE 193



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 44  KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 101

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 102 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 158

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 159 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 193



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 52


>gi|193806686|sp|A5HII1.1|ACTN_ACTDE RecName: Full=Actinidain; Short=Actinidin; AltName: Full=Allergen
           Act d 1; AltName: Allergen=Act d 1; Flags: Precursor
 gi|146215974|gb|ABQ10189.1| actinidin Act1a [Actinidia deliciosa]
          Length = 380

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 41/303 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + K Y+S+ +  RR E F   +   +++ ++ + +   G+N+F DL++ + +  T L   
Sbjct: 49  YGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRS-TYLGFT 107

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S              SN+T    R       R G  LP   DWR+ G +  +K QG+C  
Sbjct: 108 S-------------GSNKTKVSNRY----EPRVGQVLPSYVDWRSAGAVVDIKSQGECGG 150

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDNGGVV 377
           CWAFSA+  VE ++ I    L  LS Q+L+DC  +    GCNGG + D  Q+II+NGG+ 
Sbjct: 151 CWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGIN 210

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +++ YPY A + E  C +  +    V +  Y  +PY  E  ++  V T  P+SV ++A G
Sbjct: 211 TEENYPYTAQDGE--CNLDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAG 267

Query: 438 --LFYYSGGV--------IDLNQRL--YGT--SIPYWIVKNSWGSDWGE----KVEDKVG 479
               +YS G+        ID    +  YGT   I YWIVKNSW + WGE    ++   VG
Sbjct: 268 DAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVG 327

Query: 480 SSG 482
            +G
Sbjct: 328 GAG 330



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 93/167 (55%), Gaps = 20/167 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +TGVL S    L+ ++L+DC  +    GCNGG + D  Q+II+NGG+ +++ YPY A + 
Sbjct: 167 VTGVLIS----LSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDG 222

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
           E  C +  +    V +  Y  +PY  E  ++  V T  P+SV ++A G    +YS G+  
Sbjct: 223 E--CNLDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKHYSSGIF- 278

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C   A +HA+ IVGYG E       I YWIVKNSW + WGE+
Sbjct: 279 --TGPCG-TAIDHAVTIVGYGTE-----GGIDYWIVKNSWDTTWGEE 317



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++  + K Y+S+ +  RR E F   +   +++  + + +    +N+F DL+D + + 
Sbjct: 42  YESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRS 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            T L   S              SN+T    R       R G  LP   DWR+ G +  +K
Sbjct: 102 -TYLGFTS-------------GSNKTKVSNRY----EPRVGQVLPSYVDWRSAGAVVDIK 143

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG+C  CWAFSA+  VE ++ I    L  LS Q
Sbjct: 144 SQGECGGCWAFSAIATVEGINKIVTGVLISLSEQ 177


>gi|30749675|pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes
 gi|30749676|pdb|1NPZ|B Chain B, Crystal Structures Of Cathepsin S Inhibitor Complexes
 gi|30749688|pdb|1NQC|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes
          Length = 217

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 116/196 (59%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVTLSAQNLVDCSTEK 60

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 61  YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 117

Query: 413 YGEEEEMKKWVATRGPLSVGMNA---------NGLFYYSGGVIDLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A         +G++Y      ++N  +    YG     
Sbjct: 118 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 177

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 178 EYWLVKNSWGHNFGEE 193



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 44  KLVTLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 101

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 102 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 158

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 159 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 193



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVTLSAQN 52


>gi|348531519|ref|XP_003453256.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/255 (36%), Positives = 128/255 (50%), Gaps = 35/255 (13%)

Query: 237 FGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL 296
            G+  F D+   + +QL       T     P               R   F  L  G  L
Sbjct: 73  LGMTHFADMDNEEYKQLVSQGCLHTFNASLPE--------------RGSAFLGLPEGTAL 118

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-- 354
           P+  DWR +G +++VK+Q +C  CWAFS  GV+E  H  +   L  LS QQL+DC  S  
Sbjct: 119 PDTVDWRDKGYVTEVKDQKQCGSCWAFSTTGVLEGQHFRKTGKLVSLSEQQLMDCSHSFG 178

Query: 355 NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           N GCNGG +  ALQYI  NGG+ ++ +YPYKA + +R C   + +G   K   Y  +   
Sbjct: 179 NNGCNGGSVKRALQYIQANGGIDTETSYPYKA-KGQR-CRY-KPDGIGAKCTGYVHVKPS 235

Query: 415 EEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVID--------LNQRL----YGT--SIP 458
            EE +KK VAT GP+SVG++A  +   +Y  GV D        L+       YGT     
Sbjct: 236 NEETLKKAVATLGPISVGIDASRHSFQFYQSGVYDDPDCSKTVLDHGALAVGYGTENGHD 295

Query: 459 YWIVKNSWGSDWGEK 473
           YW++KNSWG  WG+K
Sbjct: 296 YWLIKNSWGLRWGDK 310



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 92/160 (57%), Gaps = 14/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++L+DC  S  N GCNGG +  ALQYI  NGG+ ++ +YPYKA + +R C   
Sbjct: 161 KLVSLSEQQLMDCSHSFGNNGCNGGSVKRALQYIQANGGIDTETSYPYKA-KGQR-CRY- 217

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
           + +G   K   Y  +    EE +KK VAT GP+SVG++A  +   +Y  GV D     C+
Sbjct: 218 KPDGIGAKCTGYVHVKPSNEETLKKAVATLGPISVGIDASRHSFQFYQSGVYD--DPDCS 275

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               +H  + VGYG E   D     YW++KNSWG  WG+K
Sbjct: 276 KTVLDHGALAVGYGTENGHD-----YWLIKNSWGLRWGDK 310



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 36/64 (56%)

Query: 135 RAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTE 194
           R   F  L  G  LP+  DWR +G +++VK+Q +C  CWAFS  GV+E  H  +   L  
Sbjct: 105 RGSAFLGLPEGTALPDTVDWRDKGYVTEVKDQKQCGSCWAFSTTGVLEGQHFRKTGKLVS 164

Query: 195 LSVQ 198
           LS Q
Sbjct: 165 LSEQ 168


>gi|356553413|ref|XP_003545051.1| PREDICTED: cysteine proteinase 15A-like [Glycine max]
          Length = 367

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 150/316 (47%), Gaps = 63/316 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+  RR   F +N+ +A  +   D  +AV GV KF DL+
Sbjct: 47  LNAEHHFASFKAKFGKKYATKEEHDRRFGVFKSNLRRARLHAKLDP-SAVHGVTKFSDLT 105

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
            ++ + Q  G             L+ P ++ +            +    DLP+ FDWR +
Sbjct: 106 PAEFRRQFLGFK----------PLRLPANAQKA----------PILPTKDLPKDFDWRDK 145

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNG 356
           G ++ VK+QG C  CW+FS  G +E  H +    L  LS QQLVDCD           + 
Sbjct: 146 GAVTNVKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYGACDS 205

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M++A +YI+ +GGV  ++ YPY   +   G    ++      V  YS +   +E
Sbjct: 206 GCNGGLMNNAFEYILQSGGVQKEKDYPYTGRD---GTCKFDKTKVAATVSNYSVVSL-DE 261

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV---------IDLNQRLYG-----------TS 456
           +++   +   GPL+VG+NA  +  Y GGV         +D    + G            +
Sbjct: 262 DQIAANLVKNGPLAVGINAVFMQTYIGGVSCPYICGKHLDHGVLIVGYGEGAYAPIRFKN 321

Query: 457 IPYWIVKNSWGSDWGE 472
            PYWI+KNSWG  WGE
Sbjct: 322 KPYWIIKNSWGESWGE 337



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 18/166 (10%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M++A +YI+ +GGV  ++ YPY   + 
Sbjct: 179 ELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRD- 237

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    ++      V  YS +   +E+++   +   GPL+VG+NA  +  Y GGV    
Sbjct: 238 --GTCKFDKTKVAATVSNYSVVSL-DEDQIAANLVKNGPLAVGINAVFMQTYIGGVS--C 292

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKD--GTSIPYWIVKNSWGSDWGE 651
             +C  K  +H ++IVGYGE         + PYWI+KNSWG  WGE
Sbjct: 293 PYICG-KHLDHGVLIVGYGEGAYAPIRFKNKPYWIIKNSWGESWGE 337



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 22/156 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F +F     K Y++ E+  RR   F +N+ +A  + + D  +AV  V KF DL+ ++ +
Sbjct: 52  HFASFKAKFGKKYATKEEHDRRFGVFKSNLRRARLHAKLDP-SAVHGVTKFSDLTPAEFR 110

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  G             L+ P ++ +            +    DLP+ FDWR +G ++ 
Sbjct: 111 RQFLGFK----------PLRLPANAQKA----------PILPTKDLPKDFDWRDKGAVTN 150

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG C  CW+FS  G +E  H +    L  LS Q
Sbjct: 151 VKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQ 186


>gi|190358935|sp|P00785.4|ACTN_ACTCH RecName: Full=Actinidain; Short=Actinidin; AltName: Allergen=Act c
           1; Flags: Precursor
 gi|12744965|gb|AAK06862.1|AF343446_1 actinidin protease [Actinidia chinensis]
          Length = 380

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 41/303 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + K Y+S+ +  RR E F   +   +++ ++ + +   G+N+F DL++ + +  T L   
Sbjct: 49  YGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRS-TYLRFT 107

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S              SN+T    R       R G  LP   DWR+ G +  +K QG+C  
Sbjct: 108 S-------------GSNKTKVSNRY----EPRVGQVLPSYVDWRSAGAVVDIKSQGECGG 150

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDNGGVV 377
           CWAFSA+  VE ++ I    L  LS Q+L+DC  +    GCNGG + D  Q+II+NGG+ 
Sbjct: 151 CWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGIN 210

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +++ YPY A + E  C V  +    V +  Y  +PY  E  ++  V T  P+SV ++A G
Sbjct: 211 TEENYPYTAQDGE--CNVDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAG 267

Query: 438 LFY--YSGGV--------IDLNQRL--YGT--SIPYWIVKNSWGSDWGE----KVEDKVG 479
             +  YS G+        +D    +  YGT   I YWIVKNSW + WGE    ++   VG
Sbjct: 268 DAFKQYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVG 327

Query: 480 SSG 482
            +G
Sbjct: 328 GAG 330



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 20/167 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +TGVL S    L+ ++L+DC  +    GCNGG + D  Q+II+NGG+ +++ YPY A + 
Sbjct: 167 VTGVLIS----LSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDG 222

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID 605
           E  C V  +    V +  Y  +PY  E  ++  V T  P+SV ++A G  +  YS G+  
Sbjct: 223 E--CNVDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKQYSSGIF- 278

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C   A +HA+ IVGYG E       I YWIVKNSW + WGE+
Sbjct: 279 --TGPCG-TAVDHAVTIVGYGTE-----GGIDYWIVKNSWDTTWGEE 317



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++  + K Y+S+ +  RR E F   +   +++  + + +    +N+F DL+D + + 
Sbjct: 42  YESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRS 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
            T L   S              SN+T    R       R G  LP   DWR+ G +  +K
Sbjct: 102 -TYLRFTS-------------GSNKTKVSNRY----EPRVGQVLPSYVDWRSAGAVVDIK 143

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG+C  CWAFSA+  VE ++ I    L  LS Q
Sbjct: 144 SQGECGGCWAFSAIATVEGINKIVTGVLISLSEQ 177


>gi|340053971|emb|CCC48265.1| cysteine peptidase precursor, fragment, partial [Trypanosoma vivax
           Y486]
          Length = 389

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 39/293 (13%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG-- 255
           Q + + Y +  +   R   F  N+ ++  Y + +   A FGV  F DL+  + +      
Sbjct: 39  QKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRTRYHNG 97

Query: 256 -LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
             + ++    ++  +Q P                        P A DWR +G ++ VK+Q
Sbjct: 98  ERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVTPVKDQ 137

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--D 372
           G C  CW+FSA+G +E   A  GN LT LS Q LV CD  + GC GG MD+A ++I+  +
Sbjct: 138 GTCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKEN 197

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           +G V + ++YPY + +  +   +         +  +  IP+ +E+ + K++A  GP++V 
Sbjct: 198 SGKVYTGKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPH-DEDAIAKYLADNGPVAVA 256

Query: 433 MNANGLFYYSGGVID------LNQRLY------GTSIPYWIVKNSWGSDWGEK 473
           ++A     YSGGV+       LN  +        +  PYWI+KNSW S WGEK
Sbjct: 257 VDATTFMSYSGGVVTSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEK 309



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 90/157 (57%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD  + GC GG MD+A ++I+  ++G V + ++YPY + +  +   +  
Sbjct: 163 LTSLSEQMLVSCDFKDNGCGGGFMDNAFEWIVKENSGKVYTGKSYPYVSEDGSKPFCIPY 222

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  IP+ +E+ + K++A  GP++V ++A     YSGGV+      C  +A
Sbjct: 223 GHEVGATITGHVDIPH-DEDAIAKYLADNGPVAVAVDATTFMSYSGGVVTS----CTSEA 277

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NH +++VGY +  K      PYWI+KNSW S WGEK
Sbjct: 278 LNHGVLLVGYNDSSKP-----PYWIIKNSWSSSWGEK 309



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 24/157 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F + + + Y +  +   R   F  N+ ++  Y   +   A F V  F DL+  + + 
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRT 92

Query: 105 LTG---LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                  + ++    ++  +Q P                        P A DWR +G ++
Sbjct: 93  RYHNGERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVT 132

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CW+FSA+G +E   A  GN LT LS Q
Sbjct: 133 PVKDQGTCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQ 169


>gi|260516672|gb|ACX43963.1| cysteine protease 3, partial [Brachiaria hybrid cultivar]
          Length = 319

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 145/294 (49%), Gaps = 43/294 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ + K YS  E    R   F  +VE    + +  + +   G+N+F DLS    ++  G 
Sbjct: 46  MKQYSKAYSHAE-FSSRFNQFKASVETIRLHNTLANASYTMGLNEFADLS---FEEFKGK 101

Query: 257 NLDSTLEDIQPSLQAPFS-SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
                       ++  F+ SN    E+ A            P + DWR    ++ +K+QG
Sbjct: 102 YFGC------KHVEREFARSNNLHQEVEA-----------APTSIDWRTSNAVTPIKDQG 144

Query: 316 KCACCWAFSAVGVVEAMHAIQG-NSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIID 372
           +C  CWAFSA G +E    +QG ++LT LS QQLVDC  S  N GCNGG MD A +YII 
Sbjct: 145 QCGSCWAFSATGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGNAGCNGGLMDYAFEYIIA 204

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           N G+ ++ AYPYK      G L  +     V +  +  +  G+E      V T GP+SV 
Sbjct: 205 NKGICAESAYPYKG----VGGLCQKSCTKVVTISGHKDVASGDEASSLNAVGTVGPVSVA 260

Query: 433 MNAN--GLFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           + A+  G  +YS GV       +L+  +    YGT  S  YWIVKNSWG+ WGE
Sbjct: 261 IEADQAGFQFYSSGVFSGTCGHNLDHGVLAVGYGTTGSQDYWIVKNSWGTSWGE 314



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 90/173 (52%), Gaps = 19/173 (10%)

Query: 485 TRDLELTGVLPSK--LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAY 540
           T  +E   VL  K  L+ L+ ++LVDC  S  N GCNGG MD A +YII N G+ ++ AY
Sbjct: 155 TGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGNAGCNGGLMDYAFEYIIANKGICAESAY 214

Query: 541 PYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFY 598
           PYK      G L  +     V +  +  +  G+E      V T GP+SV + A+  G  +
Sbjct: 215 PYKG----VGGLCQKSCTKVVTISGHKDVASGDEASSLNAVGTVGPVSVAIEADQAGFQF 270

Query: 599 YSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           YS GV       C     +H ++ VGYG    +D     YWIVKNSWG+ WGE
Sbjct: 271 YSSGVFS---GTCGHNL-DHGVLAVGYGTTGSQD-----YWIVKNSWGTSWGE 314



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 23/157 (14%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  FM+ + K YS  E    R   F  +VE    +    + +    +N+F DLS    ++
Sbjct: 42  FTAFMKQYSKAYSHAE-FSSRFNQFKASVETIRLHNTLANASYTMGLNEFADLS---FEE 97

Query: 105 LTGLNLDSTLEDIQPSLQAPFS-SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             G             ++  F+ SN    E+ A            P + DWR    ++ +
Sbjct: 98  FKGKYFGC------KHVEREFARSNNLHQEVEA-----------APTSIDWRTSNAVTPI 140

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQG-NNLTELSVQH 199
           K+QG+C  CWAFSA G +E    +QG + LT LS Q 
Sbjct: 141 KDQGQCGSCWAFSATGSIEGAWVLQGKHTLTSLSEQQ 177


>gi|157132324|ref|XP_001655999.1| cathepsin l [Aedes aegypti]
 gi|108881694|gb|EAT45919.1| AAEL002833-PA [Aedes aegypti]
          Length = 339

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 161/324 (49%), Gaps = 41/324 (12%)

Query: 174 AFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEK-AEDYQSEDS 232
           AF A     +++ +         +QH     S  E+ +R  + +V N  K A+  Q  D 
Sbjct: 9   AFVAAANAVSLYELVKEEWNAFKLQHRKNYDSETEERIRL-KIYVQNKHKIAKHNQRFDL 67

Query: 233 GTAVFG--VNKFFDL-SESDLQQLTGLNLDSTLEDIQ-PSLQAPFSSNQTDTEMRAFQFN 288
           G   +   VNK+ DL  E  +Q + G N   + + ++   ++ P +  +           
Sbjct: 68  GQEKYRLRVNKYADLLHEEFVQTVNGFNRTDSKKSLKGVRIEEPVTFIEPANV------- 120

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
                 ++P   DWR +G ++ VK+QG C  CW+FSA G +E  H  +   L  LS Q L
Sbjct: 121 ------EVPTTVDWRKKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNL 174

Query: 349 VDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           VDC     N GCNGG MD A QYI DNGG+ ++++YPY+A +    C     +      K
Sbjct: 175 VDCSGKYGNNGCNGGMMDYAFQYIKDNGGIDTEKSYPYEAIDDT--CHF-NPKAVGATDK 231

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI--------DLNQRL---- 452
            Y  IP G+EE +KK +AT GP+S+ ++A+     +YS GV         +L+  +    
Sbjct: 232 GYVDIPQGDEEALKKALATVGPVSIAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVG 291

Query: 453 YGTSIP---YWIVKNSWGSDWGEK 473
           YGTS     YW+VKNSWG+ WG++
Sbjct: 292 YGTSEEGEDYWLVKNSWGTTWGDQ 315



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 95/160 (59%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD A QYI DNGG+ ++++YPY+A +    C   
Sbjct: 165 KLVSLSEQNLVDCSGKYGNNGCNGGMMDYAFQYIKDNGGIDTEKSYPYEAIDDT--CHF- 221

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCN 612
             +      K Y  IP G+EE +KK +AT GP+S+ ++A+     +YS GV    Q  C+
Sbjct: 222 NPKAVGATDKGYVDIPQGDEEALKKALATVGPVSIAIDASHESFQFYSEGVYYEPQ--CD 279

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H ++ VGYG  E+ +     YW+VKNSWG+ WG++
Sbjct: 280 SENLDHGVLAVGYGTSEEGE----DYWLVKNSWGTTWGDQ 315



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 18/157 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSD-LQ 103
           F   H K Y S  +   R + +V N  K A+  QR D G   +   VNK+ DL   + +Q
Sbjct: 30  FKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYADLLHEEFVQ 89

Query: 104 QLTGLNLDSTLEDIQ-PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            + G N   + + ++   ++ P +  +                 ++P   DWR +G ++ 
Sbjct: 90  TVNGFNRTDSKKSLKGVRIEEPVTFIEPANV-------------EVPTTVDWRKKGAVTP 136

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK+QG C  CW+FSA G +E  H  +   L  LS Q+
Sbjct: 137 VKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQN 173


>gi|291398027|ref|XP_002715626.1| PREDICTED: cathepsin S [Oryctolagus cuniculus]
          Length = 331

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 117/202 (57%), Gaps = 21/202 (10%)

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
           L     LP++ DWR  G +++VK QG C  CWAFSAVG +EA   ++  +L  LS Q LV
Sbjct: 109 LNPNQKLPDSVDWRERGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQNLV 168

Query: 350 DCDMS---NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           DC  +   N GCNGG M +A QYIIDN G+ S+ +YPYKA + +  C   + +       
Sbjct: 169 DCSTTKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDQK--CHY-DSKHRAATCS 225

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI-------DLNQRL----Y 453
           +Y+ +P+G EE +K+ VA +GP+SV ++A  +  F Y  GV        ++N  +    Y
Sbjct: 226 KYTELPFGSEEALKEAVANKGPVSVAIDASHSSFFLYRSGVYYEPSCTQNVNHGVLAVGY 285

Query: 454 GT--SIPYWIVKNSWGSDWGEK 473
           G      YW+VKNSWG  +GE+
Sbjct: 286 GNLKGKDYWLVKNSWGIHFGEQ 307



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 93/160 (58%), Gaps = 16/160 (10%)

Query: 498 LSRLATEKLVDCDMS---NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           L  L+ + LVDC  +   N GCNGG M +A QYIIDN G+ S+ +YPYKA + +  C   
Sbjct: 159 LVSLSAQNLVDCSTTKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDQK--CHY- 215

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
           + +       +Y+ +P+G EE +K+ VA +GP+SV ++A  +  F Y  GV    +  C 
Sbjct: 216 DSKHRAATCSKYTELPFGSEEALKEAVANKGPVSVAIDASHSSFFLYRSGV--YYEPSCT 273

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               NH ++ VGYG  + KD     YW+VKNSWG  +GE+
Sbjct: 274 QNV-NHGVLAVGYGNLKGKD-----YWLVKNSWGIHFGEQ 307



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 35/57 (61%)

Query: 142 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           L     LP++ DWR  G +++VK QG C  CWAFSAVG +EA   ++  NL  LS Q
Sbjct: 109 LNPNQKLPDSVDWRERGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQ 165


>gi|226499806|ref|NP_001151335.1| cysteine protease 1 [Zea mays]
 gi|195645896|gb|ACG42416.1| cysteine protease 1 precursor [Zea mays]
          Length = 258

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 122/211 (57%), Gaps = 25/211 (11%)

Query: 281 EMRAFQFN--SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGN 338
           +M  F++   +L   DD  +  DWR +G ++ +K+Q +C CCWAF+AV  VE +H I   
Sbjct: 30  KMAGFKYGNVTLSDADDDQQTVDWRQKGAVTGIKDQRQCGCCWAFAAVAAVEGIHQITTG 89

Query: 339 SLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 397
           +L  LS QQ++DCD   N GCNGG +D+A QYI+ NGG+ ++ AYPY A+++     + +
Sbjct: 90  NLVSLSEQQVLDCDTDGNNGCNGGYIDNAFQYIVGNGGLATEDAYPYTAAQA-----MCQ 144

Query: 398 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI---------DL 448
                  +  Y  +P G+E  +   VA + P+SV ++A+    Y GGV+         +L
Sbjct: 145 SVQPVAAISGYQDVPSGDEAALAAAVANQ-PVSVAIDAHNFQLYGGGVMTAASCSTPPNL 203

Query: 449 NQRL----YGTS---IPYWIVKNSWGSDWGE 472
           N  +    YGT+    PYW++KN WG +WGE
Sbjct: 204 NHAVTAVGYGTAEDGTPYWLLKNQWGQNWGE 234



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 12/160 (7%)

Query: 493 VLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +    L  L+ ++++DCD   N GCNGG +D+A QYI+ NGG+ ++ AYPY A+++    
Sbjct: 86  ITTGNLVSLSEQQVLDCDTDGNNGCNGGYIDNAFQYIVGNGGLATEDAYPYTAAQA---- 141

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLC 611
            + +       +  Y  +P G+E  +   VA + P+SV ++A+    Y GGV+       
Sbjct: 142 -MCQSVQPVAAISGYQDVPSGDEAALAAAVANQ-PVSVAIDAHNFQLYGGGVMTA-ASCS 198

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            P   NHA+  VGYG  E  DGT  PYW++KN WG +WGE
Sbjct: 199 TPPNLNHAVTAVGYGTAE--DGT--PYWLLKNQWGQNWGE 234



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 19/114 (16%)

Query: 89  FEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN--SLRHG 145
            E+N+F D+++ +   + TGL               P  +     +M  F++   +L   
Sbjct: 1   MELNEFADMTNDEFMAMYTGLR--------------PVPAGAK--KMAGFKYGNVTLSDA 44

Query: 146 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           DD  +  DWR +G ++ +K+Q +C CCWAF+AV  VE +H I   NL  LS Q 
Sbjct: 45  DDDQQTVDWRQKGAVTGIKDQRQCGCCWAFAAVAAVEGIHQITTGNLVSLSEQQ 98


>gi|93279711|pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor
 gi|93279712|pdb|2FQ9|B Chain B, Cathepsin S With Nitrile Inhibitor
 gi|112490596|pdb|2FRA|A Chain A, Human Cathepsin S With Cra-27934, A Nitrile Inhibitor
 gi|112490597|pdb|2FRA|B Chain B, Human Cathepsin S With Cra-27934, A Nitrile Inhibitor
 gi|112490599|pdb|2FRQ|A Chain A, Human Cathepsin S With Inhibitor Cra-26871
 gi|112490600|pdb|2FRQ|B Chain B, Human Cathepsin S With Inhibitor Cra-26871
 gi|112490616|pdb|2FT2|A Chain A, Human Cathepsin S With Inhibitor Cra-29728
 gi|112490617|pdb|2FT2|B Chain B, Human Cathepsin S With Inhibitor Cra-29728
 gi|112490630|pdb|2FUD|A Chain A, Human Cathepsin S With Inhibitor Cra-27566
 gi|112490631|pdb|2FUD|B Chain B, Human Cathepsin S With Inhibitor Cra-27566
 gi|114793976|pdb|2G7Y|A Chain A, Human Cathepsin S With Inhibitor Cra-16981
 gi|114793977|pdb|2G7Y|B Chain B, Human Cathepsin S With Inhibitor Cra-16981
          Length = 225

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 2   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 61

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 62  YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 118

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 119 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 178

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 179 EYWLVKNSWGHNFGEE 194



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 45  KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 102

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 103 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 159

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 160 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 194



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 2   LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 53


>gi|297799636|ref|XP_002867702.1| hypothetical protein ARALYDRAFT_329301 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313538|gb|EFH43961.1| hypothetical protein ARALYDRAFT_329301 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 153/298 (51%), Gaps = 38/298 (12%)

Query: 192 LTELSVQHHDKVYS-SVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           + ++ +  H K Y+ ++ +  RR +NF  N+   + + +++  +   G+ +F DL+  + 
Sbjct: 47  IFQMWMSKHGKTYTNALGEKERRFQNFKDNLRFIDQHNAKNL-SYQLGLTRFADLTVQEY 105

Query: 251 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 310
           +            D+ P    P   N     +R  +      GD LPE+ DWR EG +S 
Sbjct: 106 R------------DLFPGSPKPKQRN-----LRISRRYVPLDGDQLPESVDWRNEGAVSA 148

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNG-GRMDDALQY 369
           +K+QG C  CWAFS V  VE ++ I    L  LS Q+LVDC++ N GC G G MD A Q+
Sbjct: 149 IKDQGTCNSCWAFSTVAAVEGINKIVTGELVSLSEQELVDCNLVNNGCYGSGTMDAAFQF 208

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGP 428
           +I+NGG+ SD  YPY+ S+    C   E    K + +  Y  +P  +E  ++K VA + P
Sbjct: 209 LINNGGLDSDTDYPYQGSQGY--CNRKESTSNKIITIDSYEDVPANDEISLQKAVAHQ-P 265

Query: 429 LSVGMNANG--LFYYSGGV------IDLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           +SVG++        Y  G+       DL+  L    YG+     YWIV+NSWG+ WG+
Sbjct: 266 VSVGVDKKSQEFMLYRSGIYNGPCGTDLDHALVIVGYGSENGQDYWIVRNSWGTTWGD 323



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 18/167 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNG-GRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  +L  L+ ++LVDC++ N GC G G MD A Q++I+NGG+ SD  YPY+ S+  
Sbjct: 170 INKIVTGELVSLSEQELVDCNLVNNGCYGSGTMDAAFQFLINNGGLDSDTDYPYQGSQGY 229

Query: 549 RGCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG---LFYYSGGVI 604
             C   E    K + +  Y  +P  +E  ++K VA + P+SVG++      + Y SG   
Sbjct: 230 --CNRKESTSNKIITIDSYEDVPANDEISLQKAVAHQ-PVSVGVDKKSQEFMLYRSG--- 283

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +    C     +HAL+IVGYG E  +D     YWIV+NSWG+ WG+
Sbjct: 284 -IYNGPCGTDL-DHALVIVGYGSENGQD-----YWIVRNSWGTTWGD 323



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 19/155 (12%)

Query: 45  FLNFMRDHDKVYS-SVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           F  +M  H K Y+ ++ +  RR +NF  N+   + +  ++  +    + +F DL+  + +
Sbjct: 48  FQMWMSKHGKTYTNALGEKERRFQNFKDNLRFIDQHNAKNL-SYQLGLTRFADLTVQEYR 106

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                       D+ P    P   N     +R  +      GD LPE+ DWR EG +S +
Sbjct: 107 ------------DLFPGSPKPKQRN-----LRISRRYVPLDGDQLPESVDWRNEGAVSAI 149

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CWAFS V  VE ++ I    L  LS Q
Sbjct: 150 KDQGTCNSCWAFSTVAAVEGINKIVTGELVSLSEQ 184


>gi|144905108|dbj|BAF56428.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 142/294 (48%), Gaps = 38/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + KVY+   +   R   F  NV++ E + +  +     G+N+F DL+  + +     
Sbjct: 43  MTQYGKVYTDSYEKELRSNIFKENVQRIEAFNNAGNKPYKLGINQFADLTNEEFK----- 97

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                    +   +    SN T T    F++  +     +P + DWR +G ++ +K+QG+
Sbjct: 98  --------ARNRFKGHMCSNSTRTP--TFKYEDV---SSVPASLDWRQKGAVTPIKDQGQ 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV   E +  +    L  LS Q+LVDCD    + GC GG MDDA ++I+ N 
Sbjct: 145 CGCCWAFSAVAATEGITKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIMQNK 204

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPY+  ++   C    E      +K +  +P   E  + K VA + P+SV ++
Sbjct: 205 GLNTEAKYPYQGVDAT--CNANAEAKDAASIKGFEDVPANSESALLKAVANQ-PISVAID 261

Query: 435 ANG---LFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           A+G    FY SG            GV  +   +      YW+VKNSWG  WGE+
Sbjct: 262 ASGSEFQFYSSGLFTGSCGTELDHGVTAVGYGVSDDGTKYWLVKNSWGEQWGEE 315



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD    + GC GG MDDA ++I+ N G+ ++  YPY+  ++
Sbjct: 160 ITKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIMQNKGLNTEAKYPYQGVDA 219

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C    E      +K +  +P   E  + K VA + P+SV ++A+G    +YS G+  
Sbjct: 220 T--CNANAEAKDAASIKGFEDVPANSESALLKAVANQ-PISVAIDASGSEFQFYSSGLFT 276

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +   C  +  +H +  VGYG  +  DGT   YW+VKNSWG  WGE+
Sbjct: 277 GS---CGTEL-DHGVTAVGYGVSD--DGTK--YWLVKNSWGEQWGEE 315



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 18/156 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY+   +   R   F  NV++ E +    +      +N+F DL++ + +
Sbjct: 38  RHEQWMTQYGKVYTDSYEKELRSNIFKENVQRIEAFNNAGNKPYKLGINQFADLTNEEFK 97

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                         +   +    SN T T    F++  +     +P + DWR +G ++ +
Sbjct: 98  -------------ARNRFKGHMCSNSTRTP--TFKYEDV---SSVPASLDWRQKGAVTPI 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG+C CCWAFSAV   E +  +    L  LS Q 
Sbjct: 140 KDQGQCGCCWAFSAVAATEGITKLSTGKLISLSEQE 175


>gi|357216861|gb|AET71138.1| cysteine peptidase isoform b [Sphenophorus levis]
          Length = 324

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 143/291 (49%), Gaps = 41/291 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H K Y +  +  +R   F  N+ K E + +E   G   +  G+NKF D++ ++ + +   
Sbjct: 33  HGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRAEFKAMLAT 92

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            + +     +PS+ A           + FQ   L  G  +PE+ DWR+  V++ +K+Q +
Sbjct: 93  QVKT-----KPSIVA----------TKTFQ---LADGVSVPESIDWRSRNVVTPIKDQAQ 134

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAF+ VG  E  +A+    LT  S QQLVDC    N GC+GG +DD   YI  N G
Sbjct: 135 CGSCWAFAVVGSTEGAYALSTGKLTRFSEQQLVDCTTDLNYGCDGGYLDDTFPYIQTN-G 193

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           +  +  YPY   +   G    E      KV  Y  +P   E+ + + V T GP+++ +NA
Sbjct: 194 LELESDYPYTGYD---GYCSYESSKVVTKVSSYVSVP-ANEQALLEAVGTAGPVAIAINA 249

Query: 436 NGLFYYSGGVID--------LNQRLYGTSI------PYWIVKNSWGSDWGE 472
           + L +Y  G+ID        L+  +            YW++KNSWG+DWGE
Sbjct: 250 DDLQFYFSGIIDDKYCDPEYLDHGVLAVGYDSENGRDYWLIKNSWGADWGE 300



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 13/156 (8%)

Query: 497 KLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           KL+R + ++LVDC    N GC+GG +DD   YI  NG +  +  YPY   +   G    E
Sbjct: 157 KLTRFSEQQLVDCTTDLNYGCDGGYLDDTFPYIQTNG-LELESDYPYTGYD---GYCSYE 212

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                 KV  Y  +P   E+ + + V T GP+++ +NA+ L +Y  G+ID   + C+P+ 
Sbjct: 213 SSKVVTKVSSYVSVP-ANEQALLEAVGTAGPVAIAINADDLQFYFSGIID--DKYCDPEY 269

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H ++ VGY  E  +D     YW++KNSWG+DWGE
Sbjct: 270 LDHGVLAVGYDSENGRD-----YWLIKNSWGADWGE 300



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 21/159 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFE--VNKFFDLSDS 100
            F +F   H K Y +  +  +R   F  N+ K E +  E   G   +   +NKF D++ +
Sbjct: 25  HFQSFKLKHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRA 84

Query: 101 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
           + + +    + +     +PS+ A           + FQ   L  G  +PE+ DWR+  V+
Sbjct: 85  EFKAMLATQVKT-----KPSIVA----------TKTFQ---LADGVSVPESIDWRSRNVV 126

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + +K+Q +C  CWAF+ VG  E  +A+    LT  S Q 
Sbjct: 127 TPIKDQAQCGSCWAFAVVGSTEGAYALSTGKLTRFSEQQ 165


>gi|42407296|dbj|BAD10859.1| cysteine protease [Aster tripolium]
          Length = 363

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 151/316 (47%), Gaps = 61/316 (19%)

Query: 195 LSVQHHDKV--------YSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L  +HH K+        Y + E+   R   F +N+ +A+ +Q  D  TA  GV KF DL+
Sbjct: 44  LDPEHHFKLFKNKFGRTYDTEEEHEYRLTVFKSNLRRAKRHQVLDP-TAKHGVTKFSDLT 102

Query: 247 ESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 306
            S+ ++   L L S L+    + +AP                      +LP+ FDWR +G
Sbjct: 103 PSEFRK-KYLGLKSKLKLPADANKAPILPTS-----------------NLPQDFDWRDKG 144

Query: 307 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGG 357
            ++ VK QG C  CW+FS  G +E  H +Q   L  LS QQLVDCD           + G
Sbjct: 145 AVTPVKNQGSCGSCWSFSTTGALEGSHFLQTGELVSLSEQQLVDCDHECDPAEYNSCDSG 204

Query: 358 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 417
           CNGG M++A +YI+  GG+  +  YPY   +   G    ++      V  +S +   +E+
Sbjct: 205 CNGGLMNNAFEYILKAGGLQKEADYPYTGRD---GTCKFDKSKIAASVANFSVVS-TDED 260

Query: 418 EMKKWVATRGPLSVGMNANGLFYYSGGV----------IDLNQRL--YGTS--------- 456
           ++   + T GPL++G+NA  +  Y G V          +D    L  YG++         
Sbjct: 261 QIAANLVTNGPLAIGINAAWMQTYIGQVSCPYICSKTKMDHGVLLVGYGSAGYAPLRFKE 320

Query: 457 IPYWIVKNSWGSDWGE 472
            PYWI+KNSWG DWGE
Sbjct: 321 KPYWIIKNSWGEDWGE 336



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 47/257 (18%)

Query: 417 EEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLYGTSIPYWIVKN--SWGSDWGE 472
           E  KK++  +  L +  +AN   +   S    D + R  G   P   VKN  S GS W  
Sbjct: 105 EFRKKYLGLKSKLKLPADANKAPILPTSNLPQDFDWRDKGAVTP---VKNQGSCGSCW-- 159

Query: 473 KVEDKVGSSGNRTRDLELTGVLPS-KLSRLATEKLVDCDM---------SNGGCNGGRMD 522
                   S + T  LE +  L + +L  L+ ++LVDCD           + GCNGG M+
Sbjct: 160 --------SFSTTGALEGSHFLQTGELVSLSEQQLVDCDHECDPAEYNSCDSGCNGGLMN 211

Query: 523 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 582
           +A +YI+  GG+  +  YPY   +   G    ++      V  +S +   +E+++   + 
Sbjct: 212 NAFEYILKAGGLQKEADYPYTGRD---GTCKFDKSKIAASVANFSVVS-TDEDQIAANLV 267

Query: 583 TRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE--------EEKKDGT 634
           T GPL++G+NA  +  Y G V      +C+    +H +++VGYG         +EK    
Sbjct: 268 TNGPLAIGINAAWMQTYIGQVS--CPYICSKTKMDHGVLLVGYGSAGYAPLRFKEK---- 321

Query: 635 SIPYWIVKNSWGSDWGE 651
             PYWI+KNSWG DWGE
Sbjct: 322 --PYWIIKNSWGEDWGE 336



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 19/162 (11%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L  P   F  F     + Y + E+   R   F +N+ +A+ +Q  D  TA   V KF DL
Sbjct: 43  LLDPEHHFKLFKNKFGRTYDTEEEHEYRLTVFKSNLRRAKRHQVLDP-TAKHGVTKFSDL 101

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           + S+ ++   L L S L+    + +AP                      +LP+ FDWR +
Sbjct: 102 TPSEFRK-KYLGLKSKLKLPADANKAPILPTS-----------------NLPQDFDWRDK 143

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           G ++ VK QG C  CW+FS  G +E  H +Q   L  LS Q 
Sbjct: 144 GAVTPVKNQGSCGSCWSFSTTGALEGSHFLQTGELVSLSEQQ 185


>gi|401430387|ref|XP_003886572.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|356491640|emb|CBZ40951.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 332

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E    + G+ L  LS QQLV CD  N GC+GG M  A  +++   NG + 
Sbjct: 150 CWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCSGGLMLQAFDWLLQNTNGHLH 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +       C    E     ++  +  I    E+ M  W+A  GP+++ ++A+
Sbjct: 210 TEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDAS 268

Query: 437 GLFYYSGGVI------DLNQRLYGTS------IPYWIVKNSWGSDWGEK 473
               Y  GV+       LN  +          +PYW++KNSWG DWGE+
Sbjct: 269 SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L  L+ ++LV CD  N GC+GG M  A  +++ N  G + ++ +YPY +       C  
Sbjct: 169 ELVSLSEQQLVSCDDMNDGCSGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  +  I    E+ M  W+A  GP+++ ++A+    Y  GV+      C  
Sbjct: 229 SSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
           K  NH +++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 284 KQLNHGVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAA 96

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              LN  +     +      +   + D                +P+A DWR +G ++ VK
Sbjct: 97  RY-LNGAAYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAVG +E    + G+ L  LS Q
Sbjct: 143 DQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQ 176


>gi|125547236|gb|EAY93058.1| hypothetical protein OsI_14861 [Oryza sativa Indica Group]
          Length = 339

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 152/311 (48%), Gaps = 47/311 (15%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  + +VY    +  RR E F  NV   E + + +    + GVN+F DL+  + +     
Sbjct: 41  MAQYGRVYRDDAEKARRFEVFKANVAFIESFNAGNHNFWL-GVNQFADLTNDEFR----- 94

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
               T +   PS      + +  T  R    N     D LP   DWR +G ++ +K+QG+
Sbjct: 95  -WTKTNKGFIPS------TTRVPTGFRYENVNI----DALPATVDWRTKGAVTPIKDQGQ 143

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV  +E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II NG
Sbjct: 144 CGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNG 203

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++  YPY A++ +   +          +K Y  +P   E  + K VA + P+SV ++
Sbjct: 204 GLTTESNYPYAAADDKCKSVSNS----VASIKGYEDVPANNEAALMKAVANQ-PVSVAVD 258

Query: 435 ANGLF--YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK------ 473
              +   +Y GGV+      DL+  +    YG +     YW++KNSWG+ WGE       
Sbjct: 259 GGDMTFQFYKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYWLLKNSWGTTWGENGFLRME 318

Query: 474 --VEDKVGSSG 482
             + DK G  G
Sbjct: 319 KDISDKRGMCG 329



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+ ++  YPY A++ +   +  
Sbjct: 166 KLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYAAADDKCKSVSN 225

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P   E  + K VA + P+SV ++   +   +Y GGV+  +   C 
Sbjct: 226 S----VASIKGYEDVPANNEAALMKAVANQ-PVSVAVDGGDMTFQFYKGGVMTGS---CG 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H ++ +GYG+    DGT   YW++KNSWG+ WGE   L
Sbjct: 278 TD-LDHGIVAIGYGKAS--DGTK--YWLLKNSWGTTWGENGFL 315



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 21/159 (13%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF--EVNKFFDLSD 99
             R   +M  + +VY    +  RR E F  NV   E +   ++G   F   VN+F DL++
Sbjct: 34  AARHERWMAQYGRVYRDDAEKARRFEVFKANVAFIESF---NAGNHNFWLGVNQFADLTN 90

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
            + +         T +   PS      + +  T  R    N     D LP   DWR +G 
Sbjct: 91  DEFR------WTKTNKGFIPS------TTRVPTGFRYENVNI----DALPATVDWRTKGA 134

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ +K+QG+C CCWAFSAV  +E +  +    L  LS Q
Sbjct: 135 VTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQ 173


>gi|1749812|emb|CAA90237.1| cysteine proteinase LmCPB1 [Leishmania mexicana]
          Length = 359

 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 45/296 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++        L+
Sbjct: 45  YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEF---CARYLN 100

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                       P    +   ++ A           +P+A DWR +G ++ VK+QG C  
Sbjct: 101 GAAYFAAAKRHTPQHYPKARADLSA-----------VPDAVDWREKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E    + G+ L  LS QQLV CD  N GC+GG M  A  +++   NG + 
Sbjct: 150 CWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLY 209

Query: 378 SDQAYPY--------KASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           ++ +YPY        + S S +  +VG +    V +          E+ M  W+A  GP+
Sbjct: 210 TEDSYPYVSGNGYLPECSNSSK-LVVGAQIDGHVLIGS-------SEKAMAAWLAKNGPI 261

Query: 430 SVGMNANGLFYYSGGVI------DLNQRLYGTS------IPYWIVKNSWGSDWGEK 473
           ++ ++A+    Y  GV+       +N  +          +PYW++KNSWG DWGE+
Sbjct: 262 AIALDASSFMSYKSGVLTACIGKQVNHAVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 29/167 (17%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPY--------KASE 546
           +L  L+ ++LV CD  N GC+GG M  A  +++ N  G + ++ +YPY        + S 
Sbjct: 169 ELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYLPECSN 228

Query: 547 SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDL 606
           S +  +VG +    V +          E+ M  W+A  GP+++ ++A+    Y  GV+  
Sbjct: 229 SSK-LVVGAQIDGHVLIGS-------SEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA 280

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
               C  K  NHA+++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 281 ----CIGKQVNHAVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEF-- 94

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                L+            P    +   ++ A           +P+A DWR +G ++ VK
Sbjct: 95  -CARYLNGAAYFAAAKRHTPQHYPKARADLSA-----------VPDAVDWREKGAVTPVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAVG +E    + G+ L  LS Q
Sbjct: 143 DQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQ 176


>gi|146215986|gb|ABQ10195.1| actinidin Act2d [Actinidia eriantha]
          Length = 381

 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 154/301 (51%), Gaps = 42/301 (13%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           K Y+S+++   R E F  N+   +D+ ++ + +   G+N+F DL++ + +        ST
Sbjct: 53  KSYNSLDEKEMRFEIFKENLRIIDDHNADANRSYSLGLNRFADLTDEEYR--------ST 104

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
               +   +A  S+               + G  LP   DWR  G +  VK+QG C+ CW
Sbjct: 105 YLGFKSGPKAKVSNRYVP-----------KVGVVLPNYVDWRTVGAVVGVKDQGLCSSCW 153

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSD 379
           AFSAV  VE ++ I   +L  LS Q+LVDC  +    GCN G M+DA Q+IIDNGG+ ++
Sbjct: 154 AFSAVAAVEGINKIVTGNLISLSEQELVDCGRTQRTRGCNRGYMNDAFQFIIDNGGINTE 213

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
             YPY A + +  C    +    V +  Y ++P   E  ++  VA + P++VG+ + G  
Sbjct: 214 DNYPYTAQDGQ--CDWYRKNQRYVTIDNYEQLPANNEWVLQNAVAYQ-PITVGLESEGGK 270

Query: 440 Y----------YSGGVIDLNQRL--YGT--SIPYWIVKNSWGSDWGE----KVEDKVGSS 481
           +          Y G  ID    +  YGT   + YWIVKNSWG++WGE    +++  +G +
Sbjct: 271 FKLYTSGIYTGYCGTAIDHGVTIVGYGTERGLDYWIVKNSWGTNWGENGYIRIQRNIGGA 330

Query: 482 G 482
           G
Sbjct: 331 G 331



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 90/166 (54%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  ++   L  L+ ++LVDC  +    GCN G M+DA Q+IIDNGG+ ++  YPY A + 
Sbjct: 164 INKIVTGNLISLSEQELVDCGRTQRTRGCNRGYMNDAFQFIIDNGGINTEDNYPYTAQDG 223

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
           +  C    +    V +  Y ++P   E  ++  VA + P++VG+ + G     Y+ G+  
Sbjct: 224 Q--CDWYRKNQRYVTIDNYEQLPANNEWVLQNAVAYQ-PITVGLESEGGKFKLYTSGIY- 279

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                C   A +H + IVGYG E   D     YWIVKNSWG++WGE
Sbjct: 280 --TGYCG-TAIDHGVTIVGYGTERGLD-----YWIVKNSWGTNWGE 317



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 19/154 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           + +++ +  K Y+S+++   R E F  N+   +D+  + + +    +N+F DL+D + + 
Sbjct: 44  YESWLVEQGKSYNSLDEKEMRFEIFKENLRIIDDHNADANRSYSLGLNRFADLTDEEYR- 102

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
                  ST    +   +A  S+               + G  LP   DWR  G +  VK
Sbjct: 103 -------STYLGFKSGPKAKVSNRYVP-----------KVGVVLPNYVDWRTVGAVVGVK 144

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C+ CWAFSAV  VE ++ I   NL  LS Q
Sbjct: 145 DQGLCSSCWAFSAVAAVEGINKIVTGNLISLSEQ 178


>gi|340368358|ref|XP_003382719.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 329

 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 147/291 (50%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQS-EDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
           ++K Y + E  L R   + +N +  E++ +  D       +N+F DL   +   +     
Sbjct: 30  YNKAYETKETELARQVIWESNKKFVENHNANSDKFGFTVAMNEFADLGAGEFANI----- 84

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                 I P    P S N T+T  R     ++R    L ++ DWR  G ++ VK QGKC 
Sbjct: 85  ---YNGIIPH---PPSYNNTNTFKR-----TVRSTFALADSVDWRKSGAVTGVKNQGKCG 133

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGV 376
            CWAFSA G +E  H I   +L  LS QQL+DC  S  N GC GG MD+A +Y+    G 
Sbjct: 134 ACWAFSATGALEGQHFINTGTLISLSEQQLMDCSSSFGNNGCKGGLMDNAFRYLETVAGD 193

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA- 435
           ++++AYPY A   E G         KVK   Y  IP G+E+ +++ VAT GP+SV +N+ 
Sbjct: 194 MTEEAYPYLA---EVGTCRYNSSEAKVKNTVYKDIPEGDEDALQEAVATIGPISVSINSE 250

Query: 436 --------NGLFY---YSGGVIDLNQRL--YGTS--IPYWIVKNSWGSDWG 471
                    G++Y    S   +D    +  YGTS    YW+VKNSWG++WG
Sbjct: 251 HSSFQLYDQGVYYEPTCSSSKLDHGVLVIGYGTSDNNDYWLVKNSWGTNWG 301



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 92/164 (56%), Gaps = 18/164 (10%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           TG L S    L+ ++L+DC  S  N GC GG MD+A +Y+    G ++++AYPY A   E
Sbjct: 152 TGTLIS----LSEQQLMDCSSSFGNNGCKGGLMDNAFRYLETVAGDMTEEAYPYLA---E 204

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDL 606
            G         KVK   Y  IP G+E+ +++ VAT GP+SV +N+  +    Y  GV   
Sbjct: 205 VGTCRYNSSEAKVKNTVYKDIPEGDEDALQEAVATIGPISVSINSEHSSFQLYDQGV--Y 262

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
            +  C+    +H ++++GYG  +  D     YW+VKNSWG++WG
Sbjct: 263 YEPTCSSSKLDHGVLVIGYGTSDNND-----YWLVKNSWGTNWG 301



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 17/156 (10%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQ-REDSGTAVFEVNKFFDLSDSDLQ 103
           F ++   ++K Y + E  L R   + +N +  E++    D       +N+F DL   +  
Sbjct: 23  FQDWKVKYNKAYETKETELARQVIWESNKKFVENHNANSDKFGFTVAMNEFADLGAGEFA 82

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            +           I P    P S N T+T  R     ++R    L ++ DWR  G ++ V
Sbjct: 83  NI--------YNGIIPH---PPSYNNTNTFKR-----TVRSTFALADSVDWRKSGAVTGV 126

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QGKC  CWAFSA G +E  H I    L  LS Q 
Sbjct: 127 KNQGKCGACWAFSATGALEGQHFINTGTLISLSEQQ 162


>gi|18399697|ref|NP_565512.1| putative cysteine proteinase A494 [Arabidopsis thaliana]
 gi|12643282|sp|P43295.2|A494_ARATH RecName: Full=Probable cysteine proteinase A494; Flags: Precursor
 gi|4567274|gb|AAD23687.1| cysteine proteinase [Arabidopsis thaliana]
 gi|116325924|gb|ABJ98563.1| At2g21430 [Arabidopsis thaliana]
 gi|330252083|gb|AEC07177.1| putative cysteine proteinase A494 [Arabidopsis thaliana]
          Length = 361

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 141/300 (47%), Gaps = 51/300 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           KVY S+E+   R   F  N+ +A  +Q  D  +A  GV +F DL+ S+ ++   L +   
Sbjct: 57  KVYGSIEEHYYRFSVFKANLLRAMRHQKMDP-SARHGVTQFSDLTRSEFRR-KHLGVKGG 114

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            +  + + QAP    Q                 +LPE FDWR  G ++ VK QG C  CW
Sbjct: 115 FKLPKDANQAPILPTQ-----------------NLPEEFDWRDRGAVTPVKNQGSCGSCW 157

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDALQYIID 372
           +FS  G +E  H +    L  LS QQLVDCD           + GCNGG M+ A +Y + 
Sbjct: 158 SFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLK 217

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
            GG++ ++ YPY  ++   G    +       V  +S +   E++     +   GPL+V 
Sbjct: 218 TGGLMREKDYPYTGTDG--GSCKLDRSKIVASVSNFSVVSINEDQIAANLIKN-GPLAVA 274

Query: 433 MNANGLFYYSGGV---IDLNQRL--------YGTS---------IPYWIVKNSWGSDWGE 472
           +NA  +  Y GGV      ++RL        YG++          PYWI+KNSWG  WGE
Sbjct: 275 INAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGE 334



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 17/166 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GCNGG M+ A +Y +  GG++ ++ YPY  ++ 
Sbjct: 175 KLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDG 234

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    +       V  +S +   E++     +   GPL+V +NA  +  Y GGV    
Sbjct: 235 --GSCKLDRSKIVASVSNFSVVSINEDQIAANLIKN-GPLAVAINAAYMQTYIGGVS--C 289

Query: 608 QRLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ +  NH +++VGYG     +      PYWI+KNSWG  WGE
Sbjct: 290 PYICS-RRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGE 334



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 19/175 (10%)

Query: 25  ALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS 84
            L+   + +T   + S    F  F +   KVY S+E+   R   F  N+ +A  +Q+ D 
Sbjct: 28  VLIRQVVDETEPKVLSSEDHFTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDP 87

Query: 85  GTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH 144
            +A   V +F DL+ S+ ++   L +    +  + + QAP    Q               
Sbjct: 88  -SARHGVTQFSDLTRSEFRR-KHLGVKGGFKLPKDANQAPILPTQ--------------- 130

Query: 145 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
             +LPE FDWR  G ++ VK QG C  CW+FS  G +E  H +    L  LS Q 
Sbjct: 131 --NLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQ 183


>gi|356545116|ref|XP_003540991.1| PREDICTED: vignain-like [Glycine max]
          Length = 342

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 148/300 (49%), Gaps = 41/300 (13%)

Query: 196 SVQH------HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD 249
           SV+H      + KVY    +  +R + F  NV   E + +         +N+F DL +  
Sbjct: 35  SVKHEKWMAQYGKVYKDAAEKEKRFQIFKNNVHFIESFHAAGDKPFNLSINQFADLHKFK 94

Query: 250 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
              + G   +  +               T TE  +F+++S+     +P + DWR  G ++
Sbjct: 95  ALLINGQKKEHNVR------------TATATEA-SFKYDSVTR---IPSSLDWRKRGAVT 138

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG-GCNGGRMDDALQ 368
            +K+QG C  CWAFS V  +E +H I    L  LS Q+LVDC   +  GC GG ++DA +
Sbjct: 139 PIKDQGTCRSCWAFSTVATIEGLHQITKGELVSLSEQELVDCVKGDSEGCYGGYVEDAFE 198

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
           +I   GGV S+  YPYK     + C V +E    V++K Y ++P   E+ + K VA + P
Sbjct: 199 FIAKKGGVASETHYPYKG--VNKTCKVKKETHGVVQIKGYEQVPSNSEKALLKAVAHQ-P 255

Query: 429 LSVGMNANG--LFYYSGGVI------DLNQRL----YGTSI---PYWIVKNSWGSDWGEK 473
           +S  + A G    +YS G+       D++  +    YG +     YW+VKNSWG++WGEK
Sbjct: 256 VSAYVEAGGYAFQFYSSGIFTGKCGTDIDHSVTVVGYGKARGGNKYWLVKNSWGTEWGEK 315



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 14/166 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           L  +   +L  L+ ++LVDC   +  GC GG ++DA ++I   GGV S+  YPYK     
Sbjct: 161 LHQITKGELVSLSEQELVDCVKGDSEGCYGGYVEDAFEFIAKKGGVASETHYPYKG--VN 218

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
           + C V +E    V++K Y ++P   E+ + K VA + P+S  + A G    +YS G+   
Sbjct: 219 KTCKVKKETHGVVQIKGYEQVPSNSEKALLKAVAHQ-PVSAYVEAGGYAFQFYSSGIFTG 277

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C     +H++ +VGYG+    +     YW+VKNSWG++WGEK
Sbjct: 278 K---CGTDI-DHSVTVVGYGKARGGN----KYWLVKNSWGTEWGEK 315



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 16/152 (10%)

Query: 47  NFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLT 106
            +M  + KVY    +  +R + F  NV   E +           +N+F DL       + 
Sbjct: 40  KWMAQYGKVYKDAAEKEKRFQIFKNNVHFIESFHAAGDKPFNLSINQFADLHKFKALLIN 99

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           G   +  +               T TE  +F+++S+     +P + DWR  G ++ +K+Q
Sbjct: 100 GQKKEHNVR------------TATATEA-SFKYDSVTR---IPSSLDWRKRGAVTPIKDQ 143

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G C  CWAFS V  +E +H I    L  LS Q
Sbjct: 144 GTCRSCWAFSTVATIEGLHQITKGELVSLSEQ 175


>gi|57118011|gb|AAW34137.1| cysteine protease gp3b [Zingiber officinale]
          Length = 466

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/277 (35%), Positives = 141/277 (50%), Gaps = 35/277 (12%)

Query: 213 RHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGLNLDSTLEDIQPSL 269
           R E F  N+   +++ +  D G   +  G+N+F DL+  + +          L D+  S 
Sbjct: 63  RLEVFKENLRFVDEHNAAADRGEHAYRLGMNRFADLTNEEYRA-------RFLRDL--SR 113

Query: 270 QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 329
               +S +   + R      LR GD LP++ DWR +G +  VK QG+C  CWAF+A+  V
Sbjct: 114 LGRSTSGEISNQYR------LREGDVLPDSIDWREKGAVVAVKSQGRCGSCWAFAAIATV 167

Query: 330 EAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 389
           E ++ I    L  LS QQLVDC   N GC GG    A QYII+NGGV S++ YPY  +  
Sbjct: 168 EGINQIVTGDLISLSEQQLVDCSTRNHGCEGGWPYRAFQYIINNGGVNSEEHYPYTGTNG 227

Query: 390 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVI- 446
                 G      V +  Y  +P  +E+ ++K VA + P+SVG+NA+G  +  Y  G+  
Sbjct: 228 TCNTTKG--NAHVVSIDSYRNVPSNDEKSLQKAVANQ-PISVGINASGRNFQLYHSGIFT 284

Query: 447 -----DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
                 LN  +    YGT     YWIVKNSWG  WG+
Sbjct: 285 GSCNTSLNHGVTVVGYGTVNGNDYWIVKNSWGESWGD 321



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 16/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           ++   L  L+ ++LVDC   N GC GG    A QYII+NGGV S++ YPY  +       
Sbjct: 173 IVTGDLISLSEQQLVDCSTRNHGCEGGWPYRAFQYIINNGGVNSEEHYPYTGTNGTCNTT 232

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLNQR 609
            G      V +  Y  +P  +E+ ++K VA + P+SVG+NA+G     Y+SG    +   
Sbjct: 233 KG--NAHVVSIDSYRNVPSNDEKSLQKAVANQ-PISVGINASGRNFQLYHSG----IFTG 285

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            CN  + NH + +VGYG     D     YWIVKNSWG  WG+
Sbjct: 286 SCN-TSLNHGVTVVGYGTVNGND-----YWIVKNSWGESWGD 321



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)

Query: 142 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LR GD LP++ DWR +G +  VK QG+C  CWAF+A+  VE ++ I   +L  LS Q 
Sbjct: 128 LREGDVLPDSIDWREKGAVVAVKSQGRCGSCWAFAAIATVEGINQIVTGDLISLSEQQ 185


>gi|328866896|gb|EGG15279.1| cysteine protease [Dictyostelium fasciculatum]
          Length = 347

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 50/309 (16%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV---FGVNKFFDLSESDLQQLTGL 256
           ++KVY S E   ++   F  N+ + +   +  + +     FGVN+F DLS   +Q+    
Sbjct: 34  YNKVYGSHE-FSQKFVTFKDNLNRIDTLNANAAASGSDTKFGVNEFADLS---VQEFRKF 89

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            +++    + PS  A  + + +D  + +           +P +FDWR +G ++ VK QG+
Sbjct: 90  YMNAVPASV-PS-DAQVAGDYSDETLAS-----------IPSSFDWRTKGAVTPVKNQGQ 136

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM----------SNGGCNGGRMDDA 366
           C  CW+FS  G VE    + GN+LT LS Q LVDCD            + GCNGG   +A
Sbjct: 137 CGSCWSFSTTGNVEGQWFLAGNTLTGLSEQNLVDCDHHCMTYDGQQSCDDGCNGGLQPNA 196

Query: 367 LQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATR 426
            QYII NGG+ ++ +YPY A   ++        G K+   +        E ++  ++A  
Sbjct: 197 FQYIIGNGGIDTETSYPYLAVAQDKCQFKASNIGAKISNWQMLST---NETQIAAYLALN 253

Query: 427 GPLSVGMNANGLFYYSGGVIDL-----------------NQRLYGTSIPYWIVKNSWGSD 469
           GP+S+  +A    +Y GGV DL                    ++G + PYW VKNSWG+ 
Sbjct: 254 GPVSIAADAAEWQFYIGGVFDLPCGKALDHGILIVGYDTETNIFGHAKPYWWVKNSWGAS 313

Query: 470 WGEKVEDKV 478
           WGE+   KV
Sbjct: 314 WGEQGYLKV 322



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 124/271 (45%), Gaps = 39/271 (14%)

Query: 402 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI-----DLNQRLYGTS 456
           K  V E++ +     +E +K+     P SV  +A     YS   +       + R  G  
Sbjct: 72  KFGVNEFADL---SVQEFRKFYMNAVPASVPSDAQVAGDYSDETLASIPSSFDWRTKGAV 128

Query: 457 IPYWIVKNS--WGSDWGEKVEDKVGSSGNRTRDLELTGVLPSKLSRLATEKLVDCDM--- 511
            P   VKN    GS W         ++GN      L G   + L+ L+ + LVDCD    
Sbjct: 129 TP---VKNQGQCGSCW------SFSTTGNVEGQWFLAG---NTLTGLSEQNLVDCDHHCM 176

Query: 512 -------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 564
                   + GCNGG   +A QYII NGG+ ++ +YPY A   ++        G K+   
Sbjct: 177 TYDGQQSCDDGCNGGLQPNAFQYIIGNGGIDTETSYPYLAVAQDKCQFKASNIGAKISNW 236

Query: 565 EYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVG 624
           +        E ++  ++A  GP+S+  +A    +Y GGV DL    C  KA +H ++IVG
Sbjct: 237 QMLST---NETQIAAYLALNGPVSIAADAAEWQFYIGGVFDLP---CG-KALDHGILIVG 289

Query: 625 YGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
           Y  E    G + PYW VKNSWG+ WGE+  L
Sbjct: 290 YDTETNIFGHAKPYWWVKNSWGASWGEQGYL 320



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 26/192 (13%)

Query: 22  IKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQR 81
           I +A+L          L+    +F +F   ++KVY S E   ++   F  N+ + +    
Sbjct: 4   IIIAILFLVALAAARKLSPEEIQFRDFQVKYNKVYGSHE-FSQKFVTFKDNLNRIDTLNA 62

Query: 82  EDSGTAV---FEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
             + +     F VN+F DLS   +Q+     +++    + PS  A  + + +D  + +  
Sbjct: 63  NAAASGSDTKFGVNEFADLS---VQEFRKFYMNAVPASV-PS-DAQVAGDYSDETLAS-- 115

Query: 139 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
                    +P +FDWR +G ++ VK QG+C  CW+FS  G VE    + GN LT LS Q
Sbjct: 116 ---------IPSSFDWRTKGAVTPVKNQGQCGSCWSFSTTGNVEGQWFLAGNTLTGLSEQ 166

Query: 199 ------HHDKVY 204
                 HH   Y
Sbjct: 167 NLVDCDHHCMTY 178


>gi|516865|emb|CAA52403.1| putative thiol protease [Arabidopsis thaliana]
          Length = 313

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 141/300 (47%), Gaps = 51/300 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           KVY S+E+   R   F  N+ +A  +Q  D  +A  GV +F DL+ S+ ++   L +   
Sbjct: 9   KVYGSIEEHYYRFSVFKANLLRAMRHQKMDP-SARHGVTQFSDLTRSEFRR-KHLGVKGG 66

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            +  + + QAP    Q                 +LPE FDWR  G ++ VK QG C  CW
Sbjct: 67  FKLPKDANQAPILPTQ-----------------NLPEEFDWRDRGAVTPVKNQGSCGSCW 109

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDALQYIID 372
           +FS  G +E  H +    L  LS QQLVDCD           + GCNGG M+ A +Y + 
Sbjct: 110 SFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLK 169

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
            GG++ ++ YPY  ++   G    +       V  +S +   E++     +   GPL+V 
Sbjct: 170 TGGLMREKDYPYTGTDG--GSCKLDRSKIVASVSNFSVVSINEDQIAANLIKN-GPLAVA 226

Query: 433 MNANGLFYYSGGV---IDLNQRL--------YGTS---------IPYWIVKNSWGSDWGE 472
           +NA  +  Y GGV      ++RL        YG++          PYWI+KNSWG  WGE
Sbjct: 227 INAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGE 286



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 17/166 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GCNGG M+ A +Y +  GG++ ++ YPY  ++ 
Sbjct: 127 KLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDG 186

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    +       V  +S +   E++     +   GPL+V +NA  +  Y GGV    
Sbjct: 187 --GSCKLDRSKIVASVSNFSVVSINEDQIAANLIKN-GPLAVAINAAYMQTYIGGVS--C 241

Query: 608 QRLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ +  NH +++VGYG     +      PYWI+KNSWG  WGE
Sbjct: 242 PYICS-RRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGE 286



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           F +   KVY S+E+   R   F  N+ +A  +Q+ D  +A   V +F DL+ S+ ++   
Sbjct: 3   FKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDP-SARHGVTQFSDLTRSEFRR-KH 60

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           L +    +  + + QAP    Q                 +LPE FDWR  G ++ VK QG
Sbjct: 61  LGVKGGFKLPKDANQAPILPTQ-----------------NLPEEFDWRDRGAVTPVKNQG 103

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            C  CW+FS  G +E  H +    L  LS Q 
Sbjct: 104 SCGSCWSFSTTGALEGAHFLATGKLVSLSEQQ 135


>gi|281352890|gb|EFB28474.1| hypothetical protein PANDA_008012 [Ailuropoda melanoleuca]
          Length = 328

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 32/249 (12%)

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
           +DL  + L  +T   + S +  ++   Q P   N T      ++ NS      LP++ DW
Sbjct: 70  YDLGMNHLGDMTSEEVISLMSSLRVPSQWP--RNVT------YKSNS---NQKLPDSVDW 118

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---SNGGCN 359
           R +G ++KVK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC      N GCN
Sbjct: 119 REKGCVTKVKYQGACGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCN 178

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG M +A QYIIDN G+ S+ +YPYKA++   G    + +       +Y+ +P G E+++
Sbjct: 179 GGFMTEAFQYIIDNNGIDSEASYPYKATD---GKCRYDSKNRAATCSKYTELPSGSEDDL 235

Query: 420 KKWVATRGPLSVGMNA--NGLFYYSGGVI-------DLNQRL----YG--TSIPYWIVKN 464
           K+ VA +GP+SV ++A  +  F Y  GV        ++N  +    YG      YW+VKN
Sbjct: 236 KEAVANKGPVSVAIDARHSSFFLYRSGVYYDPSCTQNVNHGVLVVGYGNLNGKDYWLVKN 295

Query: 465 SWGSDWGEK 473
           SWG ++G++
Sbjct: 296 SWGLNFGDQ 304



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M +A QYIIDN G+ S+ +YPYKA++   G   
Sbjct: 155 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKATD---GKCR 211

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLC 611
            + +       +Y+ +P G E+++K+ VA +GP+SV ++A  +  F Y  GV       C
Sbjct: 212 YDSKNRAATCSKYTELPSGSEDDLKEAVANKGPVSVAIDARHSSFFLYRSGV--YYDPSC 269

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG    KD     YW+VKNSWG ++G++
Sbjct: 270 TQNV-NHGVLVVGYGNLNGKD-----YWLVKNSWGLNFGDQ 304



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 11/105 (10%)

Query: 95  FDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 154
           +DL  + L  +T   + S +  ++   Q P   N T      ++ NS      LP++ DW
Sbjct: 70  YDLGMNHLGDMTSEEVISLMSSLRVPSQWP--RNVT------YKSNS---NQKLPDSVDW 118

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           R +G ++KVK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 119 REKGCVTKVKYQGACGACWAFSAVGALEAQLKLKTGKLVSLSAQN 163


>gi|157779038|gb|ABV71063.1| cathepsin L3 precursor [Schistosoma mansoni]
 gi|360044915|emb|CCD82463.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 370

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 145/300 (48%), Gaps = 50/300 (16%)

Query: 202 KVYSSVEDLLRRH----ENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           + Y+ + +  RR      NFV  +E    +Q E   T   GVN+F D ++ +L++L G  
Sbjct: 69  RAYNGIHEETRRFFIFSANFVKMMEHNHAFQ-EGKVTYKMGVNEFTDKTDYELKKLRGYK 127

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
           + S    I+        S  T                 LP   DWR EG ++ VK QG+C
Sbjct: 128 VTSGA--IRHKGSTFIRSEHTK----------------LPSKVDWRREGAVTDVKNQGQC 169

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGG 375
             CWAFS  G +E  H  + N L  LS QQLVDC  S  N GC+GG M+ A +Y+ DN G
Sbjct: 170 GSCWAFSTTGAIEGQHYRKTNRLVNLSEQQLVDCSKSYGNNGCSGGLMNSAFEYVRDNEG 229

Query: 376 VVSDQAYPY---KASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           + S+ +YPY     +E+ R CL         +V  Y  I  G+E  +   VAT+GP+SV 
Sbjct: 230 IDSEISYPYVSGDGTENNR-CLF-NASNILAQVTGYVNIHEGDERALMDAVATKGPVSVA 287

Query: 433 MNANGL----FYYSGGVID------LNQRLYGTSI---------PYWIVKNSWGSDWGEK 473
           +NA GL     Y SG   D      L+   +G  +          YW++KNSWG +WGEK
Sbjct: 288 INA-GLPSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEENGRSYWLIKNSWGEEWGEK 346



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 14/164 (8%)

Query: 496 SKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPY---KASESERG 550
           ++L  L+ ++LVDC  S  N GC+GG M+ A +Y+ DN G+ S+ +YPY     +E+ R 
Sbjct: 190 NRLVNLSEQQLVDCSKSYGNNGCSGGLMNSAFEYVRDNEGIDSEISYPYVSGDGTENNR- 248

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQ 608
           CL         +V  Y  I  G+E  +   VAT+GP+SV +NA       Y  G+     
Sbjct: 249 CLF-NASNILAQVTGYVNIHEGDERALMDAVATKGPVSVAINAGLPSFSMYKSGIYSDTD 307

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                 A +H +++VGYGEE  +      YW++KNSWG +WGEK
Sbjct: 308 CEGTLDALDHGVLVVGYGEENGRS-----YWLIKNSWGEEWGEK 346



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 19/154 (12%)

Query: 46  LNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL 105
           + F R ++ ++           NFV  +E    +Q E   T    VN+F D +D +L++L
Sbjct: 65  IQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQ-EGKVTYKMGVNEFTDKTDYELKKL 123

Query: 106 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 165
            G  + S    I+        S  T                 LP   DWR EG ++ VK 
Sbjct: 124 RGYKVTSGA--IRHKGSTFIRSEHTK----------------LPSKVDWRREGAVTDVKN 165

Query: 166 QGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           QG+C  CWAFS  G +E  H  + N L  LS Q 
Sbjct: 166 QGQCGSCWAFSTTGAIEGQHYRKTNRLVNLSEQQ 199


>gi|30685308|ref|NP_566634.2| putative cysteine proteinase [Arabidopsis thaliana]
 gi|30315949|sp|Q9LT77.1|CPR1_ARATH RecName: Full=Probable cysteine proteinase At3g19400; Flags:
           Precursor
 gi|11994462|dbj|BAB02464.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332642715|gb|AEE76236.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 362

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 150/287 (52%), Gaps = 34/287 (11%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           K Y+ + +  RR + F  N++  +++ S    T   G+ +F DL+    ++   + L   
Sbjct: 53  KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTN---EEFRAIYLRKK 109

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
           +E  + S++         TE   +     + GD LP+  DWRA G +  VK+QG C  CW
Sbjct: 110 MERTKDSVK---------TERYLY-----KEGDVLPDEVDWRANGAVVSVKDQGNCGSCW 155

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSD 379
           AFSAVG VE ++ I    L  LS Q+LVDCD    N GC+GG M+ A ++I+ NGG+ +D
Sbjct: 156 AFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETD 215

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
           Q YPY A++              V +  Y  +P  +E+ +KK VA + P+SV + A+   
Sbjct: 216 QDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQ-PVSVAIEASSQA 274

Query: 440 Y--YSGGV------IDLNQRL----YGTSI--PYWIVKNSWGSDWGE 472
           +  Y  GV      I L+  +    YG++    YWI++NSWG +WG+
Sbjct: 275 FQLYKSGVMTGTCGISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGD 321



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           +   +L  L+ ++LVDCD    N GC+GG M+ A ++I+ NGG+ +DQ YPY A++    
Sbjct: 169 ITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLC 228

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQ 608
                     V +  Y  +P  +E+ +KK VA + P+SV + A+   +  Y  GV+    
Sbjct: 229 NADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQ-PVSVAIEASSQAFQLYKSGVMTGTC 287

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +    + +H +++VGYG    +D     YWI++NSWG +WG+
Sbjct: 288 GI----SLDHGVVVVGYGSTSGED-----YWIIRNSWGLNWGD 321



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 17/152 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++ ++ K Y+ + +  RR + F  N++  +++      T    + +F DL++   ++   
Sbjct: 47  WLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTN---EEFRA 103

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           + L   +E  + S++         TE   +     + GD LP+  DWRA G +  VK+QG
Sbjct: 104 IYLRKKMERTKDSVK---------TERYLY-----KEGDVLPDEVDWRANGAVVSVKDQG 149

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            C  CWAFSAVG VE ++ I    L  LS Q 
Sbjct: 150 NCGSCWAFSAVGAVEGINQITTGELISLSEQE 181


>gi|340053965|emb|CCC48258.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 441

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 141/293 (48%), Gaps = 39/293 (13%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG-- 255
           Q + + Y +  +   R   F  N+ ++  Y + +   A FGV  F DL+  + +      
Sbjct: 39  QKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRTRYHNG 97

Query: 256 -LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
             + ++    ++  +Q P                        P A DWR +G ++ VK+Q
Sbjct: 98  ERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVTPVKDQ 137

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--D 372
           G C  CW+FSA+G +E   A  GN LT LS Q LV CD  + GC GG MD+A ++I+  +
Sbjct: 138 GSCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKEN 197

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           +G V ++++YPY +   E              +  +  IP+ +E+ + K++A  GP++V 
Sbjct: 198 SGKVYTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPH-DEDAIAKYLADNGPVAVA 256

Query: 433 MNANGLFYYSGGVID------LNQRLY------GTSIPYWIVKNSWGSDWGEK 473
           ++A     YSGGV+       LN  +        +  PYWI+KNSW S WGEK
Sbjct: 257 VDATTFMSYSGGVVTSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEK 309



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD  + GC GG MD+A ++I+  ++G V ++++YPY +   E       
Sbjct: 163 LTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPR 222

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  IP+ +E+ + K++A  GP++V ++A     YSGGV+      C  +A
Sbjct: 223 GHKVGATITGHVDIPH-DEDAIAKYLADNGPVAVAVDATTFMSYSGGVVTS----CTSEA 277

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NH +++VGY +  K      PYWI+KNSW S WGEK
Sbjct: 278 LNHGVLLVGYNDSSKP-----PYWIIKNSWSSSWGEK 309



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 24/157 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F + + + Y +  +   R   F  N+ ++  Y   +   A F V  F DL+  + + 
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRT 92

Query: 105 LTG---LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                  + ++    ++  +Q P                        P A DWR +G ++
Sbjct: 93  RYHNGERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVT 132

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CW+FSA+G +E   A  GN LT LS Q
Sbjct: 133 PVKDQGSCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQ 169


>gi|357126406|ref|XP_003564878.1| PREDICTED: cysteine proteinase EP-B 1-like [Brachypodium
           distachyon]
          Length = 377

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 153/305 (50%), Gaps = 54/305 (17%)

Query: 195 LSVQHHDKVYSSVEDLLRRHENFVTNV-------EKAEDYQSEDSGTAV-FGVNKFFDLS 246
           L  QHH + +       RR   F +NV        +  D  + ++G +    +N+F D+ 
Sbjct: 51  LPPQHHAEKH-------RRFGTFKSNVLFIHAHNTRLNDTSTNNNGPSYRLRLNRFGDMD 103

Query: 247 ESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 306
           +++ +      L       +P+   P            F +++++   D+P+A DWR +G
Sbjct: 104 QAEFRSTFAGPLH---RHTRPAQSIP-----------GFIYDTVK---DIPQAVDWRQKG 146

Query: 307 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMD 364
            ++ VK+QGKC  CWAFSAV  VE ++AI+  SL  LS Q+L+DCD    + GC GG M+
Sbjct: 147 AVTGVKDQGKCGSCWAFSAVASVEGLNAIRTGSLVSLSEQELIDCDTGGDDNGCQGGLME 206

Query: 365 DALQYIIDN-GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWV 423
            A ++I  + GG+ ++ AYPY AS     C         V++  +  +P G EE + K V
Sbjct: 207 SAFEFIAHSAGGLATEAAYPYHASNGT--CNANRGSSVSVRIDGHQSVPAGNEEALAKAV 264

Query: 424 ATRGPLSVGMNANG--LFYYSGGVI--DLNQRL-YGTSI-----------PYWIVKNSWG 467
           A + P+SV ++A G    +YS GV   D    L +G ++            YWIVKNSWG
Sbjct: 265 AHQ-PVSVAIDAGGQAFQFYSEGVFTGDCGSELDHGVAVVGYGVAEEDGKEYWIVKNSWG 323

Query: 468 SDWGE 472
             WGE
Sbjct: 324 PGWGE 328



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 19/169 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDN-GGVVSDQAYPYKASE 546
           L  +    L  L+ ++L+DCD    + GC GG M+ A ++I  + GG+ ++ AYPY AS 
Sbjct: 172 LNAIRTGSLVSLSEQELIDCDTGGDDNGCQGGLMESAFEFIAHSAGGLATEAAYPYHASN 231

Query: 547 SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI 604
               C         V++  +  +P G EE + K VA + P+SV ++A G    +YS GV 
Sbjct: 232 GT--CNANRGSSVSVRIDGHQSVPAGNEEALAKAVAHQ-PVSVAIDAGGQAFQFYSEGVF 288

Query: 605 --DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             D    L      +H + +VGYG  E+ DG    YWIVKNSWG  WGE
Sbjct: 289 TGDCGSEL------DHGVAVVGYGVAEE-DGKE--YWIVKNSWGPGWGE 328



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 25/143 (17%)

Query: 64  RRHENFVTNV-------EKAEDYQREDSGTAV-FEVNKFFDLSDSDLQQLTGLNLDSTLE 115
           RR   F +NV        +  D    ++G +    +N+F D+  ++ +      L     
Sbjct: 61  RRFGTFKSNVLFIHAHNTRLNDTSTNNNGPSYRLRLNRFGDMDQAEFRSTFAGPLH---R 117

Query: 116 DIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAF 175
             +P+   P            F +++++   D+P+A DWR +G ++ VK+QGKC  CWAF
Sbjct: 118 HTRPAQSIP-----------GFIYDTVK---DIPQAVDWRQKGAVTGVKDQGKCGSCWAF 163

Query: 176 SAVGVVEAMHAIQGNNLTELSVQ 198
           SAV  VE ++AI+  +L  LS Q
Sbjct: 164 SAVASVEGLNAIRTGSLVSLSEQ 186


>gi|357160591|ref|XP_003578813.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 151/286 (52%), Gaps = 30/286 (10%)

Query: 210 LLRRHENFVTNVEKA-EDYQSEDSGTAVFGVNKFF--DLSESDLQQLTGLN--LDSTLED 264
           ++ RHE++++   ++ +D   +D    VF  N  F    +  + +   G+N   D T E+
Sbjct: 33  MVARHESWMSQYGRSYKDAAEKDRKFEVFKANAAFIDSFNAKNHKFWLGINQFADITNEE 92

Query: 265 IQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAF 323
            + +     F SN+       F + ++   D LP   DWR +G ++ VK+QG+C CCWAF
Sbjct: 93  FKVTKTNKGFISNKVRAST-GFSYENVSI-DALPATIDWRTKGAVTPVKDQGQCGCCWAF 150

Query: 324 SAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQA 381
           SAV   E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II NGG+  + +
Sbjct: 151 SAVAATEGIVKLSTGKLVSLSEQELVDCDVHGEDQGCEGGLMDDAFKFIITNGGLTQESS 210

Query: 382 YPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF-- 439
           YPY A + +  C  G +      +K Y  +P   E  + K VA + P+SV ++   +   
Sbjct: 211 YPYDAEDGK--CKSGSKSA--GTIKSYEDVPANNEGALMKAVANQ-PVSVAVDGGDMTFQ 265

Query: 440 YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           +YSGGV+      DL+  +    YG +     YW++KNSWG+ WGE
Sbjct: 266 FYSGGVMTGSCGTDLDHGIAAIGYGVTSDGTKYWLMKNSWGTSWGE 311



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+  + +YPY A + +  C  G
Sbjct: 166 KLVSLSEQELVDCDVHGEDQGCEGGLMDDAFKFIITNGGLTQESSYPYDAEDGK--CKSG 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
            +      +K Y  +P   E  + K VA + P+SV ++   +   +YSGGV+  +   C 
Sbjct: 224 SKSA--GTIKSYEDVPANNEGALMKAVANQ-PVSVAVDGGDMTFQFYSGGVMTGS---CG 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H +  +GYG     DGT   YW++KNSWG+ WGE   L
Sbjct: 278 TDL-DHGIAAIGYGVTS--DGTK--YWLMKNSWGTSWGENGFL 315



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 8/143 (5%)

Query: 62  LLRRHENFVTNVEKA-EDYQREDSGTAVFEVNKFF--DLSDSDLQQLTGLN--LDSTLED 116
           ++ RHE++++   ++ +D   +D    VF+ N  F    +  + +   G+N   D T E+
Sbjct: 33  MVARHESWMSQYGRSYKDAAEKDRKFEVFKANAAFIDSFNAKNHKFWLGINQFADITNEE 92

Query: 117 IQPS-LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAF 175
            + +     F SN+       F + ++   D LP   DWR +G ++ VK+QG+C CCWAF
Sbjct: 93  FKVTKTNKGFISNKVRAST-GFSYENVSI-DALPATIDWRTKGAVTPVKDQGQCGCCWAF 150

Query: 176 SAVGVVEAMHAIQGNNLTELSVQ 198
           SAV   E +  +    L  LS Q
Sbjct: 151 SAVAATEGIVKLSTGKLVSLSEQ 173


>gi|18408828|ref|NP_566920.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|12324451|gb|AAG52191.1|AC012329_18 putative cysteine proteinase; 15366-14136 [Arabidopsis thaliana]
 gi|6723404|emb|CAB66413.1| cysteine protease-like protein [Arabidopsis thaliana]
 gi|332645009|gb|AEE78530.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 341

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 142/290 (48%), Gaps = 37/290 (12%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNLD 259
           ++VYS   +   R E F  N++  E      + T    VN+F DL++ + + + TGL + 
Sbjct: 43  NRVYSDDSEKTSRFEIFTNNLKFVESINMNTNKTYTLDVNEFSDLTDEEFKARYTGLVVP 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
             +  I         S     E  +F++ ++    +  E+ DW  EG ++ VK Q +C C
Sbjct: 103 EGMTRI---------STTDSHETVSFRYENV---GETGESMDWIQEGAVTSVKHQQQCGC 150

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFSAV  VE M  I    L  LS QQL+DC   N GC GG M  A  YI +N G+ ++
Sbjct: 151 CWAFSAVAAVEGMTKIANGELVSLSEQQLLDCSTENNGCGGGIMWKAFDYIKENQGITTE 210

Query: 380 QAYPYKASES--ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
             YPY+ ++   E   L          +  Y  +P  +EE + K V+ + P+SV +  +G
Sbjct: 211 DNYPYQGAQQTCESNHLAA------ATISGYETVPQNDEEALLKAVSQQ-PVSVAIEGSG 263

Query: 438 --LFYYSGGVID------LNQRL----YGTS---IPYWIVKNSWGSDWGE 472
               +YSGG+ +      L   +    YG S   I YW++KNSWG  WGE
Sbjct: 264 YEFIHYSGGIFNGECGTQLTHAVTIVGYGVSEEGIKYWLLKNSWGESWGE 313



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 19/166 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES-- 547
           +T +   +L  L+ ++L+DC   N GC GG M  A  YI +N G+ ++  YPY+ ++   
Sbjct: 163 MTKIANGELVSLSEQQLLDCSTENNGCGGGIMWKAFDYIKENQGITTEDNYPYQGAQQTC 222

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
           E   L          +  Y  +P  +EE + K V+ + P+SV +  +G    +YSGG+ +
Sbjct: 223 ESNHLAA------ATISGYETVPQNDEEALLKAVSQQ-PVSVAIEGSGYEFIHYSGGIFN 275

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                C  +   HA+ IVGYG  E+     I YW++KNSWG  WGE
Sbjct: 276 GE---CGTQL-THAVTIVGYGVSEE----GIKYWLLKNSWGESWGE 313



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 17/185 (9%)

Query: 20  FMIKVALLESNI--FQTRGYL--NSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK 75
           F +   LL S      +RG L   S V +   +M   ++VYS   +   R E F  N++ 
Sbjct: 6   FFLLAILLSSRTSGVTSRGGLFEASAVEKHEQWMSRFNRVYSDDSEKTSRFEIFTNNLKF 65

Query: 76  AEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM 134
            E      + T   +VN+F DL+D + + + TGL +   +  I         S     E 
Sbjct: 66  VESINMNTNKTYTLDVNEFSDLTDEEFKARYTGLVVPEGMTRI---------STTDSHET 116

Query: 135 RAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTE 194
            +F++ ++    +  E+ DW  EG ++ VK Q +C CCWAFSAV  VE M  I    L  
Sbjct: 117 VSFRYENV---GETGESMDWIQEGAVTSVKHQQQCGCCWAFSAVAAVEGMTKIANGELVS 173

Query: 195 LSVQH 199
           LS Q 
Sbjct: 174 LSEQQ 178


>gi|356543114|ref|XP_003540008.1| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase
           CEP1-like [Glycine max]
          Length = 343

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 140/294 (47%), Gaps = 36/294 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ + KVY    ++ +R   F  NVE  E + +  +      +N   D +  +       
Sbjct: 42  MEKYGKVYKDSAEMQKRFLIFENNVEFIESFNAAGNKPYKLSINHLADQTNEEFMASHKG 101

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              S  + ++ + Q PF                     D+P A DWR +G ++ +K+Q +
Sbjct: 102 YKGSHWQGLRITTQTPFKYENVT---------------DIPWAVDWRQKGDVTSIKDQAQ 146

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFSAV   E ++ I   +L  LS ++LVDCD  + GC+GG M+   ++II NGG+
Sbjct: 147 CGNCWAFSAVAATEGIYQITTGNLVSLSEKELVDCDSVDHGCDGGLMEHGFEFIIKNGGI 206

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            S+  YPY A      C   +E     ++  Y  +P   EEE++K VA +  +SV ++A 
Sbjct: 207 SSEANYPYTAVNGT--CDTNKEASPVAQITGYETVPVNCEEELQKAVANQLTMSVSIDAG 264

Query: 437 G---LFYYSG------------GV--IDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           G    FY SG            GV  +      YGT   YWIVKNSWG+ WGE+
Sbjct: 265 GSAFQFYPSGVFTGQCGTQLDHGVTAVGYGSTDYGTQ--YWIVKNSWGTQWGEE 316



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 12/162 (7%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +    L  L+ ++LVDCD  + GC+GG M+   ++II NGG+ S+  YPY A      C 
Sbjct: 165 ITTGNLVSLSEKELVDCDSVDHGCDGGLMEHGFEFIIKNGGISSEANYPYTAVNGT--CD 222

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRL 610
             +E     ++  Y  +P   EEE++K VA +  +SV ++A G    +Y  GV       
Sbjct: 223 TNKEASPVAQITGYETVPVNCEEELQKAVANQLTMSVSIDAGGSAFQFYPSGVFTGQ--- 279

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           C  +  +H +  VGYG  +   GT   YWIVKNSWG+ WGE+
Sbjct: 280 CGTQL-DHGVTAVGYGSTDY--GTQ--YWIVKNSWGTQWGEE 316



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 15/153 (9%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY    ++ +R   F  NVE  E +    +      +N   D ++ +  
Sbjct: 37  RHEQWMEKYGKVYKDSAEMQKRFLIFENNVEFIESFNAAGNKPYKLSINHLADQTNEEFM 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   S  + ++ + Q PF                     D+P A DWR +G ++ +
Sbjct: 97  ASHKGYKGSHWQGLRITTQTPFKYENVT---------------DIPWAVDWRQKGDVTSI 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELS 196
           K+Q +C  CWAFSAV   E ++ I   NL  LS
Sbjct: 142 KDQAQCGNCWAFSAVAATEGIYQITTGNLVSLS 174


>gi|26452046|dbj|BAC43113.1| putative cysteine proteinase RD21A precursor [Arabidopsis thaliana]
          Length = 362

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 147/287 (51%), Gaps = 34/287 (11%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           K Y+ + +  RR + F  N++  +++ S    T   G+ +F DL+  + + +        
Sbjct: 53  KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIY------- 105

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
                  L+     N+   +   + +   + GD LP+  DWRA G +  VK+QG C  CW
Sbjct: 106 -------LRKKMERNKDSVKTERYLY---KEGDVLPDEVDWRANGAVVSVKDQGNCGSCW 155

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSD 379
           AFSAVG VE ++ I    L  LS Q+LVDCD    N GC+GG M+ A ++I+ NGG+ +D
Sbjct: 156 AFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETD 215

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
           Q YPY A++              V +  Y  +P  +E+ +KK VA + P+SV + A+   
Sbjct: 216 QDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQ-PVSVAIEASSQA 274

Query: 440 Y--YSGGV------IDLNQRL----YGTSI--PYWIVKNSWGSDWGE 472
           +  Y  GV      I L+  +    YG++    YWI++NSWG +WG+
Sbjct: 275 FQLYKSGVMTGTCGISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGD 321



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           +   +L  L+ ++LVDCD    N GC+GG M+ A ++I+ NGG+ +DQ YPY A++    
Sbjct: 169 ITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLC 228

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQ 608
                     V +  Y  +P  +E+ +KK VA + P+SV + A+   +  Y  GV+    
Sbjct: 229 NADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQ-PVSVAIEASSQAFQLYKSGVMTGTC 287

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +    + +H +++VGYG    +D     YWI++NSWG +WG+
Sbjct: 288 GI----SLDHGVVVVGYGSTSGED-----YWIIRNSWGLNWGD 321



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 17/152 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTG 107
           ++ ++ K Y+ + +  RR + F  N++  +++      T    + +F DL++ + + +  
Sbjct: 47  WLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIY- 105

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
                        L+     N+   +   + +   + GD LP+  DWRA G +  VK+QG
Sbjct: 106 -------------LRKKMERNKDSVKTERYLY---KEGDVLPDEVDWRANGAVVSVKDQG 149

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            C  CWAFSAVG VE ++ I    L  LS Q 
Sbjct: 150 NCGSCWAFSAVGAVEGINQITTGELISLSEQE 181


>gi|68304200|ref|YP_249668.1| VCATH [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973029|gb|AAY83995.1| VCATH [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 344

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 160/300 (53%), Gaps = 38/300 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQLTGLNL 258
           + KVY+   +   R++ F TN+E   + +++ + +AV+ +NKF DL++++ + + TGL +
Sbjct: 54  YKKVYADDNERDYRYKIFKTNLEII-NLKNQQNDSAVYNINKFADLTKNEVIAKFTGLGI 112

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
            S      P+L+        D   +  Q           E FDWR    I+ VK+QG C 
Sbjct: 113 RS------PALKNSCEPVIVDGPSKYTQ-----------ETFDWRQFNKITSVKDQGFCG 155

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
            CWAFS +  +E+ +AI+ N   +LS QQLVDCD  + GC GG +  A + I+  GG+  
Sbjct: 156 SCWAFSTIAGLESQYAIKYNEHVDLSEQQLVDCDTIDMGCAGGLLHTAYEEIMAMGGLEY 215

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           ++ YPY+   S +G    + + F+V V    R     E+++K  +   GP++V ++A  L
Sbjct: 216 EEDYPYR---SVQGPCRLQSDKFEVSVDNCYRYVLYSEDKLKDVLHEMGPIAVAVDAVDL 272

Query: 439 FYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGE----KVEDKVGSSG 482
             Y GG+I       LN  +    YG    +P+W++KNSWGSD+GE    +V+  V S G
Sbjct: 273 TDYYGGIITSCKNYGLNHAVLLVGYGIENGVPFWVLKNSWGSDYGENGFVRVKRNVNSCG 332



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 86/151 (56%), Gaps = 12/151 (7%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ ++LVDCD  + GC GG +  A + I+  GG+  ++ YPY+   S +G    + + F+
Sbjct: 180 LSEQQLVDCDTIDMGCAGGLLHTAYEEIMAMGGLEYEEDYPYR---SVQGPCRLQSDKFE 236

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           V V    R     E+++K  +   GP++V ++A  L  Y GG+I      C     NHA+
Sbjct: 237 VSVDNCYRYVLYSEDKLKDVLHEMGPIAVAVDAVDLTDYYGGII----TSCKNYGLNHAV 292

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           ++VGYG E       +P+W++KNSWGSD+GE
Sbjct: 293 LLVGYGIE-----NGVPFWVLKNSWGSDYGE 318



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 19/169 (11%)

Query: 32  FQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEV 91
           F+ +  L      F  F   + KVY+   +   R++ F TN+E   + + + + +AV+ +
Sbjct: 34  FKLQYNLERAPQYFETFQTKYKKVYADDNERDYRYKIFKTNLEII-NLKNQQNDSAVYNI 92

Query: 92  NKFFDLSDSD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPE 150
           NKF DL+ ++ + + TGL + S      P+L+        D   +  Q           E
Sbjct: 93  NKFADLTKNEVIAKFTGLGIRS------PALKNSCEPVIVDGPSKYTQ-----------E 135

Query: 151 AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            FDWR    I+ VK+QG C  CWAFS +  +E+ +AI+ N   +LS Q 
Sbjct: 136 TFDWRQFNKITSVKDQGFCGSCWAFSTIAGLESQYAIKYNEHVDLSEQQ 184


>gi|8886940|gb|AAF80626.1|AC069251_19 F2D10.37 [Arabidopsis thaliana]
          Length = 315

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 141/255 (55%), Gaps = 24/255 (9%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TG 255
           + + +K Y +VE+   R E F  N+ K  D  ++   +   G+N+F DLS  + +++  G
Sbjct: 55  ISNFEKAYETVEEKFLRFEVFKDNL-KHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLG 113

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L  D    D                E R++   + R  + +P++ DWR +G +++VK QG
Sbjct: 114 LKTDIVRRD----------------EERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQG 157

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNG 374
            C  CWAFS V  VE ++ I   +LT LS Q+L+DCD + N GCNGG MD A +YI+ NG
Sbjct: 158 SCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNG 217

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+  ++ YPY  S  E  C + ++E   V +  +  +P  +E+ + K +A + PLSV ++
Sbjct: 218 GLRKEEDYPY--SMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQ-PLSVAID 274

Query: 435 ANG--LFYYSGGVID 447
           A+G    +YSGGV D
Sbjct: 275 ASGREFQFYSGGVFD 289



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 10/146 (6%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L+ L+ ++L+DCD + N GCNGG MD A +YI+ NGG+  ++ YPY  S  E
Sbjct: 174 INKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPY--SMEE 231

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C + ++E   V +  +  +P  +E+ + K +A + PLSV ++A+G    +YSGGV D 
Sbjct: 232 GTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQ-PLSVAIDASGREFQFYSGGVFDG 290

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKD 632
               C     +H +  VGYG  +  D
Sbjct: 291 R---CGVDL-DHGVAAVGYGSSKGSD 312



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 18/158 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +  F N++ + +K Y +VE+   R E F  N++  ++  ++   +    +N+F DLS  +
Sbjct: 48  IELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKK-GKSYWLGLNEFADLSHEE 106

Query: 102 LQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            +++  GL  D    D                E R++   + R  + +P++ DWR +G +
Sbjct: 107 FKKMYLGLKTDIVRRD----------------EERSYAEFAYRDVEAVPKSVDWRKKGAV 150

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++VK QG C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 151 AEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQ 188


>gi|296081395|emb|CBI16828.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 119/194 (61%), Gaps = 19/194 (9%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSN 355
           LP + DWR +G ++ +K+QGKC  CWAFS V  VE ++ I+   L  LS QQL+DCD S+
Sbjct: 128 LPPSVDWRKKGAVTGIKDQGKCGSCWAFSTVVGVEGINQIKTKELLSLSEQQLIDCDRSD 187

Query: 356 G-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
             GCNGG M+ A ++I  NGG+ ++  YPYKA + ER C + +     V +  +  +P  
Sbjct: 188 DHGCNGGLMESAFEFIKKNGGITTENNYPYKAKD-ER-CDMLKMNAPVVTIDGHESVPVN 245

Query: 415 EEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID------LNQRL----YGTSI---PY 459
           +E  + K VA + P+SV ++A G  L +YS GV D      L+  +    YGT++    Y
Sbjct: 246 DERALMKAVAHQ-PVSVAIDAGGSDLQFYSEGVFDGECGTELDHGVAIVGYGTTLDGTKY 304

Query: 460 WIVKNSWGSDWGEK 473
           WIVKNSWG++WGEK
Sbjct: 305 WIVKNSWGAEWGEK 318



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 97/163 (59%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   +L  L+ ++L+DCD S+  GCNGG M+ A ++I  NGG+ ++  YPYKA + ER C
Sbjct: 167 IKTKELLSLSEQQLIDCDRSDDHGCNGGLMESAFEFIKKNGGITTENNYPYKAKD-ER-C 224

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +     V +  +  +P  +E  + K VA + P+SV ++A G  L +YS GV D    
Sbjct: 225 DMLKMNAPVVTIDGHESVPVNDERALMKAVAHQ-PVSVAIDAGGSDLQFYSEGVFDGE-- 281

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H + IVGYG     DGT   YWIVKNSWG++WGEK
Sbjct: 282 -CGTEL-DHGVAIVGYG--TTLDGTK--YWIVKNSWGAEWGEK 318



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP + DWR +G ++ +K+QGKC  CWAFS V  VE ++ I+   L  LS Q 
Sbjct: 128 LPPSVDWRKKGAVTGIKDQGKCGSCWAFSTVVGVEGINQIKTKELLSLSEQQ 179


>gi|13124026|sp|Q9WGE0.1|CATV_NPVHC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|4884631|gb|AAD31760.1|AF120926_1 cysteine proteinase [Hyphantria cunea nucleopolyhedrovirus]
          Length = 324

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 162/338 (47%), Gaps = 39/338 (11%)

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDY 227
           K   C     V    A   ++  +  E  +   +K YSS  + LRR + F  N+E+    
Sbjct: 3   KIVLCLLVFCVAHSAAYDLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEI-II 61

Query: 228 QSEDSGTAVFGVNKFFDLSESD-LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 286
           ++++  TA + +NKF DLS+ + + + TGL L             P    QT        
Sbjct: 62  KNQNDTTAQYEINKFSDLSKDETISKYTGLAL-------------PL---QTQNFCEVVV 105

Query: 287 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQ 346
            N  R  D  P  FDWR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS Q
Sbjct: 106 LN--RPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQ 163

Query: 347 QLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           QL+DCD  + GCNGG +  A + ++  GGV ++  YPY+ S+    C V   +      K
Sbjct: 164 QLIDCDYVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDG--NCRVDVAKFVVKVKK 221

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT- 455
            Y  I    EE++K  +   GP+ V ++A+ +  Y  G++        N  +    YG  
Sbjct: 222 CYRYIAVF-EEKLKDLLRIVGPIPVAIDASDIVNYRRGIMRYCSNYGFNHAVLLVGYGVE 280

Query: 456 -SIPYWIVKNSWGSDWGE----KVEDKVGSSGNRTRDL 488
            ++PYWI+KN+WG DWGE    +V+  + + G R   L
Sbjct: 281 NNVPYWILKNTWGEDWGEQGYFRVQQNINACGIRNELL 318



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 12/157 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           ++L  L+ ++L+DCD  + GCNGG +  A + ++  GGV ++  YPY+ S+    C V  
Sbjct: 155 NQLINLSEQQLIDCDYVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDG--NCRVDV 212

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            +      K Y  I    EE++K  +   GP+ V ++A+ +  Y  G++    R C+   
Sbjct: 213 AKFVVKVKKCYRYIAVF-EEKLKDLLRIVGPIPVAIDASDIVNYRRGIM----RYCSNYG 267

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NHA+++VGYG E      ++PYWI+KN+WG DWGE+
Sbjct: 268 FNHAVLLVGYGVE-----NNVPYWILKNTWGEDWGEQ 299



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 86/181 (47%), Gaps = 23/181 (12%)

Query: 22  IKVALLESNIFQTRGY--LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           I + LL   +  +  Y  L +P + F +F+   +K YSS  + LRR + F  N+E+    
Sbjct: 4   IVLCLLVFCVAHSAAYDLLKAP-SYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIK 62

Query: 80  QREDSGTAVFEVNKFFDLS-DSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
            + D+ TA +E+NKF DLS D  + + TGL L             P    QT        
Sbjct: 63  NQNDT-TAQYEINKFSDLSKDETISKYTGLAL-------------PL---QTQNFCEVVV 105

Query: 139 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            N  R  D  P  FDWR    ++ VK QG C  CWAF+ +  +E+  AI+ N L  LS Q
Sbjct: 106 LN--RPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQ 163

Query: 199 H 199
            
Sbjct: 164 Q 164


>gi|414584879|tpg|DAA35450.1| TPA: cysteine protease 1 [Zea mays]
          Length = 522

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 42/306 (13%)

Query: 188 QGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF--GVNKFFDL 245
           +   L EL +  H + Y+++ +  RR   F  N+ +  D  +E +    F  G+N+F DL
Sbjct: 104 EARTLYELWLAEHGRAYNALGERDRRFRVFWDNL-RFVDAHNERAAEHGFRLGMNQFADL 162

Query: 246 SESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG---DDLPEAFDW 302
           +  + +                 L A   +++        ++   RHG   ++LPE+ DW
Sbjct: 163 TNDEFRAAY--------------LGARIPASRRRGTAVGERY---RHGGGAEELPESVDW 205

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC--DMSNGGCNG 360
           R +G ++ VK QG+C  CWAFSAV  VE+++ I    +  LS Q+LV+C  D  N GCNG
Sbjct: 206 REKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNG 265

Query: 361 GRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMK 420
           G MD A  +II NGG+ ++  YPYKA + +  C +  E    V +  +  +P  +E+ ++
Sbjct: 266 GLMDAAFDFIIKNGGIDTEGDYPYKAVDGK--CDINRENAKVVSIDGFEDVPENDEKSLQ 323

Query: 421 KWVATRGPLSVGMNANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSW 466
           K VA + P+SV + A G  +  Y  GV       +L+  +    YGT     YWIV+NSW
Sbjct: 324 KAVAHQ-PVSVAIEAGGREFQLYKAGVFTGTCTTNLDHGVVAVGYGTENGKDYWIVRNSW 382

Query: 467 GSDWGE 472
           G+ WGE
Sbjct: 383 GAKWGE 388



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 38/266 (14%)

Query: 398 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV--GMNANGLFYYSGGVIDLNQ----R 451
           E GF++ + +++ +    +E    ++  R P S   G      + + GG  +L +    R
Sbjct: 149 EHGFRLGMNQFADLT--NDEFRAAYLGARIPASRRRGTAVGERYRHGGGAEELPESVDWR 206

Query: 452 LYGTSIPYWIVKNS--WGSDWGEKVEDKVGSSGNRTRDLELTGVLPSKLSRLATEKLVDC 509
             G   P   VKN    GS W       V S         +  ++  ++  L+ ++LV+C
Sbjct: 207 EKGAVAP---VKNQGQCGSCWAFSAVSSVES---------VNQIVTGEMVTLSEQELVEC 254

Query: 510 --DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 567
             D  N GCNGG MD A  +II NGG+ ++  YPYKA + +  C +  E    V +  + 
Sbjct: 255 STDGGNSGCNGGLMDAAFDFIIKNGGIDTEGDYPYKAVDGK--CDINRENAKVVSIDGFE 312

Query: 568 RIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPKAQNHALIIVGY 625
            +P  +E+ ++K VA + P+SV + A G  +  Y  GV       C     +H ++ VGY
Sbjct: 313 DVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYKAGVF---TGTCTTNL-DHGVVAVGY 367

Query: 626 GEEEKKDGTSIPYWIVKNSWGSDWGE 651
           G E  KD     YWIV+NSWG+ WGE
Sbjct: 368 GTENGKD-----YWIVRNSWGAKWGE 388



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 23/156 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEV--NKFFDLSDSDLQQL 105
           ++ +H + Y+++ +  RR   F  N+ +  D   E +    F +  N+F DL++ + +  
Sbjct: 112 WLAEHGRAYNALGERDRRFRVFWDNL-RFVDAHNERAAEHGFRLGMNQFADLTNDEFRAA 170

Query: 106 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG---DDLPEAFDWRAEGVISK 162
                          L A   +++        ++   RHG   ++LPE+ DWR +G ++ 
Sbjct: 171 Y--------------LGARIPASRRRGTAVGERY---RHGGGAEELPESVDWREKGAVAP 213

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG+C  CWAFSAV  VE+++ I    +  LS Q
Sbjct: 214 VKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQ 249


>gi|359473128|ref|XP_002285397.2| PREDICTED: vignain-like [Vitis vinifera]
          Length = 357

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 119/194 (61%), Gaps = 19/194 (9%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSN 355
           LP + DWR +G ++ +K+QGKC  CWAFS V  VE ++ I+   L  LS QQL+DCD S+
Sbjct: 126 LPPSVDWRKKGAVTGIKDQGKCGSCWAFSTVVGVEGINQIKTKELLSLSEQQLIDCDRSD 185

Query: 356 G-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
             GCNGG M+ A ++I  NGG+ ++  YPYKA + ER C + +     V +  +  +P  
Sbjct: 186 DHGCNGGLMESAFEFIKKNGGITTENNYPYKAKD-ER-CDMLKMNAPVVTIDGHESVPVN 243

Query: 415 EEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID------LNQRL----YGTSI---PY 459
           +E  + K VA + P+SV ++A G  L +YS GV D      L+  +    YGT++    Y
Sbjct: 244 DERALMKAVAHQ-PVSVAIDAGGSDLQFYSEGVFDGECGTELDHGVAIVGYGTTLDGTKY 302

Query: 460 WIVKNSWGSDWGEK 473
           WIVKNSWG++WGEK
Sbjct: 303 WIVKNSWGAEWGEK 316



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 97/163 (59%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNG-GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +   +L  L+ ++L+DCD S+  GCNGG M+ A ++I  NGG+ ++  YPYKA + ER C
Sbjct: 165 IKTKELLSLSEQQLIDCDRSDDHGCNGGLMESAFEFIKKNGGITTENNYPYKAKD-ER-C 222

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            + +     V +  +  +P  +E  + K VA + P+SV ++A G  L +YS GV D    
Sbjct: 223 DMLKMNAPVVTIDGHESVPVNDERALMKAVAHQ-PVSVAIDAGGSDLQFYSEGVFDGE-- 279

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H + IVGYG     DGT   YWIVKNSWG++WGEK
Sbjct: 280 -CGTEL-DHGVAIVGYG--TTLDGTK--YWIVKNSWGAEWGEK 316



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP + DWR +G ++ +K+QGKC  CWAFS V  VE ++ I+   L  LS Q 
Sbjct: 126 LPPSVDWRKKGAVTGIKDQGKCGSCWAFSTVVGVEGINQIKTKELLSLSEQQ 177


>gi|146335576|gb|ABQ23397.1| cathepsin L [Trypanosoma carassii]
          Length = 456

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 159/344 (46%), Gaps = 48/344 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H K Y+S  +   R   F  ++ KA    +  +  A FGV KF DL+  + + L      
Sbjct: 43  HGKSYTSAAEEGYRMRVFEESM-KAAQAHAAANPHAKFGVTKFSDLTHEEFKTLYANGAA 101

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                 +   + P S   T                  P+ +DWR +G ++ VK+QG C  
Sbjct: 102 HFAAAAK-RARRPVSVTGT-----------------APDEWDWRKKGAVTPVKDQGHCGS 143

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGGVV 377
           CW FS  G +E   A+ GN LT LS Q LV CD  + GC+GG MD+A ++I+  ++G V 
Sbjct: 144 CWTFSTTGNIEGQWAVAGNELTNLSEQMLVSCDARDYGCSGGLMDNAFEWIVNQNDGFVF 203

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++++YPY +   +   C VG  +     +K +  +P  +EE+M  W+A  GP+S+ ++A+
Sbjct: 204 TEESYPYASGSGDAPLCDVGGRK-VGATIKGHVGLP-NDEEKMAAWLAANGPISIAVDAD 261

Query: 437 GLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGNR 484
               Y GGV        +D    L G     + PYWI+KNSWG +WGE    +VG   N+
Sbjct: 262 SFKAYKGGVLTGCEEGQLDHGVLLVGYNKVANPPYWIIKNSWGPNWGEHGYIRVGFGTNQ 321

Query: 485 TR------------DLELTGVLPSKLSRLATEKLVDCDMSNGGC 516
                          +  T   P   S   T+K+      NG C
Sbjct: 322 CNLNSYACSAIVGGPIPNTTTAPDHGSSSVTQKICVGPSCNGMC 365



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 94/162 (58%), Gaps = 14/162 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERG 550
           V  ++L+ L+ + LV CD  + GC+GG MD+A ++I+  ++G V ++++YPY +   +  
Sbjct: 159 VAGNELTNLSEQMLVSCDARDYGCSGGLMDNAFEWIVNQNDGFVFTEESYPYASGSGDAP 218

Query: 551 -CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C VG  +     +K +  +P  +EE+M  W+A  GP+S+ ++A+    Y GGV+     
Sbjct: 219 LCDVGGRK-VGATIKGHVGLP-NDEEKMAAWLAANGPISIAVDADSFKAYKGGVLT---- 272

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C     +H +++VGY +         PYWI+KNSWG +WGE
Sbjct: 273 GCEEGQLDHGVLLVGYNKVANP-----PYWIIKNSWGPNWGE 309



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 19/157 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
             +F  F  +H K Y+S  +   R   F  ++ KA       +  A F V KF DL+  +
Sbjct: 33  AAQFAAFKAEHGKSYTSAAEEGYRMRVFEESM-KAAQAHAAANPHAKFGVTKFSDLTHEE 91

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            + L            +   + P S   T                  P+ +DWR +G ++
Sbjct: 92  FKTLYANGAAHFAAAAK-RARRPVSVTGT-----------------APDEWDWRKKGAVT 133

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CW FS  G +E   A+ GN LT LS Q
Sbjct: 134 PVKDQGHCGSCWTFSTTGNIEGQWAVAGNELTNLSEQ 170


>gi|301767946|ref|XP_002919405.1| PREDICTED: cathepsin S-like [Ailuropoda melanoleuca]
          Length = 340

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 32/249 (12%)

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
           +DL  + L  +T   + S +  ++   Q P   N T      ++ NS      LP++ DW
Sbjct: 82  YDLGMNHLGDMTSEEVISLMSSLRVPSQWP--RNVT------YKSNS---NQKLPDSVDW 130

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---SNGGCN 359
           R +G ++KVK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC      N GCN
Sbjct: 131 REKGCVTKVKYQGACGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCN 190

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG M +A QYIIDN G+ S+ +YPYKA++   G    + +       +Y+ +P G E+++
Sbjct: 191 GGFMTEAFQYIIDNNGIDSEASYPYKATD---GKCRYDSKNRAATCSKYTELPSGSEDDL 247

Query: 420 KKWVATRGPLSVGMNA--NGLFYYSGGVI-------DLNQRL----YG--TSIPYWIVKN 464
           K+ VA +GP+SV ++A  +  F Y  GV        ++N  +    YG      YW+VKN
Sbjct: 248 KEAVANKGPVSVAIDARHSSFFLYRSGVYYDPSCTQNVNHGVLVVGYGNLNGKDYWLVKN 307

Query: 465 SWGSDWGEK 473
           SWG ++G++
Sbjct: 308 SWGLNFGDQ 316



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M +A QYIIDN G+ S+ +YPYKA++   G   
Sbjct: 167 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKATD---GKCR 223

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLC 611
            + +       +Y+ +P G E+++K+ VA +GP+SV ++A  +  F Y  GV       C
Sbjct: 224 YDSKNRAATCSKYTELPSGSEDDLKEAVANKGPVSVAIDARHSSFFLYRSGV--YYDPSC 281

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG    KD     YW+VKNSWG ++G++
Sbjct: 282 TQNV-NHGVLVVGYGNLNGKD-----YWLVKNSWGLNFGDQ 316



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 11/105 (10%)

Query: 95  FDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 154
           +DL  + L  +T   + S +  ++   Q P   N T      ++ NS      LP++ DW
Sbjct: 82  YDLGMNHLGDMTSEEVISLMSSLRVPSQWP--RNVT------YKSNS---NQKLPDSVDW 130

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           R +G ++KVK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 131 REKGCVTKVKYQGACGACWAFSAVGALEAQLKLKTGKLVSLSAQN 175


>gi|343476707|emb|CCD12272.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 156/318 (49%), Gaps = 35/318 (11%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVTVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  PEA DWR +G ++ VK+QG+C  CWAFSA+G +E    + G++LT LS Q LV
Sbjct: 124 ----GKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIGNIEGQWKVTGHNLTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYIIDNG--GVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD  + GC GG MD+A ++I+ +    V ++++YPY +            +    K+++
Sbjct: 180 SCDTEDLGCAGGLMDNAFKWIVSSNRHNVFTEESYPYASKGGNVPPCRMSGKVVGAKIRD 239

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----T 455
           +  +P  +E  + +W+A  GP+++ +++     Y+GGV        +D    L G    +
Sbjct: 240 HVDLP-KDENAIAEWLAKNGPVAIAVDSTSFQSYTGGVLTSCISKQLDHGVLLVGYDDTS 298

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSW   WGE+
Sbjct: 299 KPPYWIIKNSWSKGWGEE 316



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNG--GVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD  + GC GG MD+A ++I+ +    V ++++YPY +           
Sbjct: 170 LTSLSEQMLVSCDTEDLGCAGGLMDNAFKWIVSSNRHNVFTEESYPYASKGGNVPPCRMS 229

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            +    K++++  +P  +E  + +W+A  GP+++ +++     Y+GGV+      C  K 
Sbjct: 230 GKVVGAKIRDHVDLP-KDENAIAEWLAKNGPVAIAVDSTSFQSYTGGVLTS----CISKQ 284

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY +  K      PYWI+KNSW   WGE+
Sbjct: 285 LDHGVLLVGYDDTSKP-----PYWIIKNSWSKGWGEE 316



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                PEA DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVTVST-------------GKAPEAVDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFSA+G +E    + G+NLT LS Q
Sbjct: 142 KDQGQCGSCWAFSAIGNIEGQWKVTGHNLTSLSEQ 176


>gi|412992445|emb|CCO18425.1| unknown [Bathycoccus prasinos]
          Length = 500

 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 151/302 (50%), Gaps = 51/302 (16%)

Query: 208 EDLLRRHENFVTNVEKAEDYQSED---SGTAVFGVNKFFDLSESDL-QQLTGLNLDSTLE 263
           E+  +R E F  N ++A + + +D    G+A  GV KFFDLSE +  +Q  GL       
Sbjct: 190 EEYEKRMEIFQENWKRAIEREIDDRKGGGSAKHGVTKFFDLSEEEFREQYLGL------- 242

Query: 264 DIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQGKCACCW 321
                L    SS+ +    R  Q  +    D   LP+ +DWRA G ++ VK+QG+C  CW
Sbjct: 243 -----LSTSTSSSASKDAFRKHQMEAPSEEDLEKLPQYYDWRARGAVTPVKDQGQCGSCW 297

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---------NGGCNGGRMDDALQYIID 372
            FS  G +E  + I+   L  LS QQL+DCD+          + GCNGG   +A++YI++
Sbjct: 298 TFSTTGAIEGANFIKTGKLVSLSEQQLLDCDVGCAPDIPNACDSGCNGGLPSNAMEYIVE 357

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           +GG+ ++++YPYKA + E  C   +E      +  Y+ +    E  M   +   GPLS+G
Sbjct: 358 HGGLDTEKSYPYKAYK-EDTCRA-KEGKLGATISNYTFVG-KNETHMAHALVKYGPLSIG 414

Query: 433 MNANGLFYYSGGV-----IDLNQRLYGTSI----------------PYWIVKNSWGSDWG 471
           +NA  +  Y GGV      + +   +G  I                PYW++KNSWG  WG
Sbjct: 415 INAAWMQSYVGGVACPWLCNKDALDHGVLIVGYGEEGFAPARLHKEPYWVIKNSWGMGWG 474

Query: 472 EK 473
           E+
Sbjct: 475 EE 476



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 16/171 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS---------NGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 543
           +   KL  L+ ++L+DCD+          + GCNGG   +A++YI+++GG+ ++++YPYK
Sbjct: 311 IKTGKLVSLSEQQLLDCDVGCAPDIPNACDSGCNGGLPSNAMEYIVEHGGLDTEKSYPYK 370

Query: 544 ASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV 603
           A + E  C   +E      +  Y+ +    E  M   +   GPLS+G+NA  +  Y GGV
Sbjct: 371 AYK-EDTCRA-KEGKLGATISNYTFVG-KNETHMAHALVKYGPLSIGINAAWMQSYVGGV 427

Query: 604 IDLNQRLCNPKAQNHALIIVGYGEEEKKDGT--SIPYWIVKNSWGSDWGEK 652
                 LCN  A +H ++IVGYGEE          PYW++KNSWG  WGE+
Sbjct: 428 A--CPWLCNKDALDHGVLIVGYGEEGFAPARLHKEPYWVIKNSWGMGWGEE 476



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 18/146 (12%)

Query: 60  EDLLRRHENFVTNVEKAEDYQ---REDSGTAVFEVNKFFDLSDSDL-QQLTGLNLDSTLE 115
           E+  +R E F  N ++A + +   R+  G+A   V KFFDLS+ +  +Q  GL       
Sbjct: 190 EEYEKRMEIFQENWKRAIEREIDDRKGGGSAKHGVTKFFDLSEEEFREQYLGL------- 242

Query: 116 DIQPSLQAPFSSNQTDTEMRAFQFNSLRHGD--DLPEAFDWRAEGVISKVKEQGKCACCW 173
                L    SS+ +    R  Q  +    D   LP+ +DWRA G ++ VK+QG+C  CW
Sbjct: 243 -----LSTSTSSSASKDAFRKHQMEAPSEEDLEKLPQYYDWRARGAVTPVKDQGQCGSCW 297

Query: 174 AFSAVGVVEAMHAIQGNNLTELSVQH 199
            FS  G +E  + I+   L  LS Q 
Sbjct: 298 TFSTTGAIEGANFIKTGKLVSLSEQQ 323


>gi|348528696|ref|XP_003451852.1| PREDICTED: cathepsin F-like [Oreochromis niloticus]
          Length = 475

 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 38/290 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           ++KVYSS E++ RR   F  N++ AE  Q+ D G+A +GV KF DL+E + +      L 
Sbjct: 184 YNKVYSSQEEVDRRLRIFHENLKTAEKLQALDQGSAEYGVTKFSDLTEEEFRSTYLNPLL 243

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           S     QP   A  +   +                  P+++DWR  G +S VK QG C  
Sbjct: 244 SQWTLHQPMKPATPAKGPS------------------PDSWDWRDHGAVSPVKNQGMCGS 285

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFS +G +E    ++  +L  LS Q+LVDCD  +  C GG   +A + I   GG+ ++
Sbjct: 286 CWAFSVIGNIEGQWFLKNGTLLSLSEQELVDCDGLDQACRGGLPSNAYEAIEKLGGLETE 345

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
             Y Y   +       G+   +   +     +P  +E+E+  W+A  GP+SV +NA  + 
Sbjct: 346 SDYSYTGHKQRCDFTTGKVAAY---INSSVELP-KDEKEIAAWLAENGPVSVALNAFAMQ 401

Query: 440 YYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           +Y  G+            ID    L G      IP+W +KNSWG D+GE+
Sbjct: 402 FYRKGISHPLKIFCNPWMIDHAVLLVGYGERKGIPFWAIKNSWGEDYGEQ 451



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 9/155 (5%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  +  C GG   +A + I   GG+ ++  Y Y   +       G+  
Sbjct: 306 LLSLSEQELVDCDGLDQACRGGLPSNAYEAIEKLGGLETESDYSYTGHKQRCDFTTGKVA 365

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
            +   +     +P  +E+E+  W+A  GP+SV +NA  + +Y  G+    +  CNP   +
Sbjct: 366 AY---INSSVELP-KDEKEIAAWLAENGPVSVALNAFAMQFYRKGISHPLKIFCNPWMID 421

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           HA+++VGYGE +      IP+W +KNSWG D+GE+
Sbjct: 422 HAVLLVGYGERK-----GIPFWAIKNSWGEDYGEQ 451



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  FM  ++KVYSS E++ RR   F  N++ AE  Q  D G+A + V KF DL++ + +
Sbjct: 176 QFKEFMTKYNKVYSSQEEVDRRLRIFHENLKTAEKLQALDQGSAEYGVTKFSDLTEEEFR 235

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                 L S     QP   A  +   +                  P+++DWR  G +S V
Sbjct: 236 STYLNPLLSQWTLHQPMKPATPAKGPS------------------PDSWDWRDHGAVSPV 277

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS +G +E    ++   L  LS Q
Sbjct: 278 KNQGMCGSCWAFSVIGNIEGQWFLKNGTLLSLSEQ 312


>gi|255585361|ref|XP_002533377.1| cysteine protease, putative [Ricinus communis]
 gi|223526784|gb|EEF29008.1| cysteine protease, putative [Ricinus communis]
          Length = 381

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 141/304 (46%), Gaps = 52/304 (17%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           +DK Y + E+ + R   F  N+ +A ++Q  D  TAV G+  F DL+E + +++    + 
Sbjct: 74  YDKEYDTREEYMHRLGVFAKNLIRAAEHQVLDP-TAVHGITPFMDLTEEEFERMYTGVVG 132

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                 +      F                      LP +FDWR +G ++ VK QG C  
Sbjct: 133 GGAVGAEGVTATSFLETA-----------------GLPSSFDWRKKGAVTDVKMQGACGS 175

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNGGCNGGRMDDALQYI 370
           CWAFS  G +E  + I    L  LS QQLVDCD           + GC GG M +A +Y+
Sbjct: 176 CWAFSTTGAIEGANFIATGKLLNLSEQQLVDCDRVCDIKEKTACDDGCGGGLMTNAYRYL 235

Query: 371 IDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           I+ GG+  + +YPY     +  C   +E+   V+V  ++ IP  +E ++   +   GPL+
Sbjct: 236 IEAGGLEDEISYPYTGKPGK--CKF-DEKKIAVRVVNFTSIPI-DENQIAAHLVHHGPLA 291

Query: 431 VGMNANGLFYYSGGV----------IDLNQRLYGTSI-----------PYWIVKNSWGSD 469
           +G+NA  +  Y GGV          I+    L G              PYWI+KNSWG  
Sbjct: 292 IGLNAVFMQTYIGGVSCPLICGKKWINHGVLLVGYGAKGFSILRLGYKPYWIIKNSWGKR 351

Query: 470 WGEK 473
           WGE+
Sbjct: 352 WGEE 355



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 25/175 (14%)

Query: 493 VLPSKLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 543
           +   KL  L+ ++LVDCD           + GC GG M +A +Y+I+ GG+  + +YPY 
Sbjct: 191 IATGKLLNLSEQQLVDCDRVCDIKEKTACDDGCGGGLMTNAYRYLIEAGGLEDEISYPYT 250

Query: 544 ASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV 603
               +  C   +E+   V+V  ++ IP  +E ++   +   GPL++G+NA  +  Y GGV
Sbjct: 251 GKPGK--CKF-DEKKIAVRVVNFTSIPI-DENQIAAHLVHHGPLAIGLNAVFMQTYIGGV 306

Query: 604 IDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSI------PYWIVKNSWGSDWGEK 652
                 +C  K  NH +++VGYG +    G SI      PYWI+KNSWG  WGE+
Sbjct: 307 --SCPLICGKKWINHGVLLVGYGAK----GFSILRLGYKPYWIIKNSWGKRWGEE 355



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 18/155 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  FM  +DK Y + E+ + R   F  N+ +A ++Q  D  TAV  +  F DL++ + ++
Sbjct: 67  FKMFMIKYDKEYDTREEYMHRLGVFAKNLIRAAEHQVLDP-TAVHGITPFMDLTEEEFER 125

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +    +       +      F                      LP +FDWR +G ++ VK
Sbjct: 126 MYTGVVGGGAVGAEGVTATSFLETA-----------------GLPSSFDWRKKGAVTDVK 168

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG C  CWAFS  G +E  + I    L  LS Q 
Sbjct: 169 MQGACGSCWAFSTTGAIEGANFIATGKLLNLSEQQ 203


>gi|357160569|ref|XP_003578807.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 148/293 (50%), Gaps = 43/293 (14%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF--GVNKFFDLSESDLQQLTGL 256
            + +VY    +   + E F  N    + +   ++G   F  G+N+F D++  + +     
Sbjct: 43  QYGRVYKDAAEKASKFEVFKANAGFIDSF---NAGNHKFWLGINQFADITNKEFKATK-- 97

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              +    I   ++AP            F + ++   D LP + DWR +G ++ VK+QG+
Sbjct: 98  ---TNKGFISNKVRAP----------TGFSYENVSF-DALPASIDWRTKGAVTPVKDQGQ 143

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNG 374
           C CCWAFSAV   E +  +    L  LS Q+LVDCD+   + GC GG MDDA ++II NG
Sbjct: 144 CGCCWAFSAVAATEGIVKLSTGKLVSLSEQELVDCDVHGEDQGCEGGLMDDAFKFIISNG 203

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+  + +YPY A + +  C  G +      +K Y  +P   E  + K VA + P+SV ++
Sbjct: 204 GLTQESSYPYDAEDGK--CKSGSKSA--GTIKSYEDVPANNEGALMKAVANQ-PVSVAVD 258

Query: 435 ANGLF--YYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
              +   +YSGGV+      DL+  +    YG +     YW++KNSWG+ WGE
Sbjct: 259 GGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGVTSDGTKYWLMKNSWGTSWGE 311



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG MDDA ++II NGG+  + +YPY A + +  C  G
Sbjct: 166 KLVSLSEQELVDCDVHGEDQGCEGGLMDDAFKFIISNGGLTQESSYPYDAEDGK--CKSG 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
            +      +K Y  +P   E  + K VA + P+SV ++   +   +YSGGV+  +   C 
Sbjct: 224 SKSA--GTIKSYEDVPANNEGALMKAVANQ-PVSVAVDGGDMTFQFYSGGVMTGS---CG 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H +  +GYG     DGT   YW++KNSWG+ WGE   L
Sbjct: 278 TDL-DHGIAAIGYGVTS--DGTK--YWLMKNSWGTSWGENGFL 315



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 21/161 (13%)

Query: 40  SPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVF--EVNKFFDL 97
           S V R  ++M  + +VY    +   + E F  N    + +   ++G   F   +N+F D+
Sbjct: 32  SMVARHESWMLQYGRVYKDAAEKASKFEVFKANAGFIDSF---NAGNHKFWLGINQFADI 88

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           ++ + +        +    I   ++AP            F + ++   D LP + DWR +
Sbjct: 89  TNKEFKATK-----TNKGFISNKVRAP----------TGFSYENVSF-DALPASIDWRTK 132

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G ++ VK+QG+C CCWAFSAV   E +  +    L  LS Q
Sbjct: 133 GAVTPVKDQGQCGCCWAFSAVAATEGIVKLSTGKLVSLSEQ 173


>gi|343471272|emb|CCD16264.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 157/318 (49%), Gaps = 35/318 (11%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C    A+GV+ A  ++Q         Q + + Y    +   R   F  ++E+A++ ++
Sbjct: 20  AACLVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRMFKQSMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  +L+  T LN     +    +L+ P       T         
Sbjct: 77  AANPYATFGVTQFSDMSPEELRA-TYLN---GAKYYAAALKRPRKVVNVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  P A DWR +G ++ VK+Q KC  CWAFSA G +E    + G+ LT LS Q LV
Sbjct: 124 ----GKAPPAVDWRKKGAVTPVKDQRKCGSCWAFSATGNIEGQWKVAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD  + GC GG MD AL++I+  + G V ++++YPY +++ +        +    K+  
Sbjct: 180 SCDNMDDGCQGGLMDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPCNMSGKVVGAKISG 239

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRLY------GT 455
           +  +P  +E  + +W+A  GP+++ ++A+    Y GGV+       LN  +        +
Sbjct: 240 HINLP-KDENAIAEWLAKNGPVAIAVDASSFLDYKGGVLTSCSSDALNHDVLLVGYDDTS 298

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSWG  WGE+
Sbjct: 299 KPPYWIIKNSWGKKWGEE 316



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 91/158 (57%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVG 554
           +L+ L+ + LV CD  + GC GG MD AL++I+  + G V ++++YPY +++ +      
Sbjct: 169 ELTSLSEQMLVSCDNMDDGCQGGLMDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPCNM 228

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
             +    K+  +  +P  +E  + +W+A  GP+++ ++A+    Y GGV+      C+  
Sbjct: 229 SGKVVGAKISGHINLP-KDENAIAEWLAKNGPVAIAVDASSFLDYKGGVLTS----CSSD 283

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A NH +++VGY +  K      PYWI+KNSWG  WGE+
Sbjct: 284 ALNHDVLLVGYDDTSKP-----PYWIIKNSWGKKWGEE 316



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  ++E+A++ +   +  A F V +F D+S  +L+
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKE-EAAANPYATFGVTQFSDMSPEELR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             T LN     +    +L+ P       T                P A DWR +G ++ V
Sbjct: 99  A-TYLN---GAKYYAAALKRPRKVVNVST-------------GKAPPAVDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+Q KC  CWAFSA G +E    + G+ LT LS Q
Sbjct: 142 KDQRKCGSCWAFSATGNIEGQWKVAGHELTSLSEQ 176


>gi|71897043|ref|NP_001026516.1| cathepsin S precursor [Gallus gallus]
 gi|53126701|emb|CAG30977.1| hypothetical protein RCJMB04_1f23 [Gallus gallus]
          Length = 328

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 121/234 (51%), Gaps = 32/234 (13%)

Query: 259 DSTLEDIQP---SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           D T ED+      L+ P+  NQT T  R       R G   P+A DWR +G +++VK QG
Sbjct: 82  DMTSEDVAALLTGLRVPYGHNQTSTYRR-------RGG--APDAMDWREKGCVTEVKNQG 132

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDN 373
            C  CWAFSAVG +EA   ++   L  LS Q LVDC M   N GC GG M  A QYIIDN
Sbjct: 133 ACGACWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSMMYGNKGCGGGFMTRAFQYIIDN 192

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ S+++YPY A   + G              +Y  +PY +E  +K  VA  GP+SV +
Sbjct: 193 NGIDSEESYPYMA---QNGTCQYNVSTRAATCSKYVELPYADEAALKDAVANVGPVSVAI 249

Query: 434 NAN--GLFYYSGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           +A     F Y  GV D       +N  +    YGT     +W+VKNSWG  +G+
Sbjct: 250 DATQPTFFLYRSGVYDDPRCTQEVNHGVLVVGYGTLNEKDFWLVKNSWGERFGD 303



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 86/162 (53%), Gaps = 21/162 (12%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC M   N GC GG M  A QYIIDN G+ S+++YPY A   + G    
Sbjct: 156 KLVSLSAQNLVDCSMMYGNKGCGGGFMTRAFQYIIDNNGIDSEESYPYMA---QNGTCQY 212

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCN 612
                     +Y  +PY +E  +K  VA  GP+SV ++A     F Y  GV D      +
Sbjct: 213 NVSTRAATCSKYVELPYADEAALKDAVANVGPVSVAIDATQPTFFLYRSGVYD------D 266

Query: 613 PKAQ---NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           P+     NH +++VGYG   +KD     +W+VKNSWG  +G+
Sbjct: 267 PRCTQEVNHGVLVVGYGTLNEKD-----FWLVKNSWGERFGD 303



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 12/91 (13%)

Query: 111 DSTLEDIQP---SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
           D T ED+      L+ P+  NQT T  R       R G   P+A DWR +G +++VK QG
Sbjct: 82  DMTSEDVAALLTGLRVPYGHNQTSTYRR-------RGG--APDAMDWREKGCVTEVKNQG 132

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 133 ACGACWAFSAVGALEAQVKLKTGKLVSLSAQ 163


>gi|407396649|gb|EKF27516.1| cysteine peptidase, partial [Trypanosoma cruzi marinkellei]
          Length = 247

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 117/204 (57%), Gaps = 19/204 (9%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           PEA DWRA G ++ VK+QG C  CWAFSA+G VE    + GN LT LSVQ LV CD +N 
Sbjct: 23  PEAVDWRARGAVTPVKDQGLCGSCWAFSAIGNVEGQWFLAGNPLTRLSVQMLVSCDKTND 82

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKAS-ESERGCL-VGEEEGFKVKVKEYSRIP 412
           GC GG   +A ++I+  +NG V ++++YPYK+       C+ VG + G   ++K +  +P
Sbjct: 83  GCGGGLTSNAFEWIVQENNGNVYTEESYPYKSCMRITPPCIKVGRKVG--ARIKGHVELP 140

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI------DLNQRLY------GTSIPYW 460
             +E+ +  W+A +GP++V ++A    +Y  G++       LN  +         ++PYW
Sbjct: 141 K-DEDRITGWLANKGPVAVAVDATSWMFYWSGILTNCVSKKLNHAVLLVGYNDSAAVPYW 199

Query: 461 IVKNSWGSDWGEKVEDKVGSSGNR 484
            +KNSW   WGE    ++    N+
Sbjct: 200 TIKNSWSRLWGESGYIRIAKGSNQ 223



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 96/159 (60%), Gaps = 18/159 (11%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKAS-ESERGCL-V 553
           L+RL+ + LV CD +N GC GG   +A ++I+  +NG V ++++YPYK+       C+ V
Sbjct: 66  LTRLSVQMLVSCDKTNDGCGGGLTSNAFEWIVQENNGNVYTEESYPYKSCMRITPPCIKV 125

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG-LFYYSGGVIDLNQRLCN 612
           G + G   ++K +  +P  +E+ +  W+A +GP++V ++A   +FY+SG + +     C 
Sbjct: 126 GRKVG--ARIKGHVELPK-DEDRITGWLANKGPVAVAVDATSWMFYWSGILTN-----CV 177

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            K  NHA+++VGY      D  ++PYW +KNSW   WGE
Sbjct: 178 SKKLNHAVLLVGY-----NDSAAVPYWTIKNSWSRLWGE 211



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           PEA DWRA G ++ VK+QG C  CWAFSA+G VE    + GN LT LSVQ
Sbjct: 23  PEAVDWRARGAVTPVKDQGLCGSCWAFSAIGNVEGQWFLAGNPLTRLSVQ 72


>gi|218181|dbj|BAA14402.1| oryzain alpha precursor [Oryza sativa Japonica Group]
          Length = 458

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 151/291 (51%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H K Y++V +  RR+  F  N+   +++ +  D+G   F  G+N+F DL+  + +  T L
Sbjct: 47  HGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRD-TYL 105

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L +     +P  +   S      +  A           LPE+ DWR +G ++++K+QG 
Sbjct: 106 GLRN-----KPRRERKVSDRYLAADNEA-----------LPESVDWRTKGAVAEIKDQGG 149

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFSA+  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A  +II+NGG
Sbjct: 150 CGSCWAFSAIAAVEDINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGG 209

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPYK  + ER C V  +    V +  Y  +    E  ++K V  + P+SV + A
Sbjct: 210 IDTEDDYPYKGKD-ER-CDVNRKNAKVVTIDSYEDVTPNSETSLQKAVRNQ-PVSVAIEA 266

Query: 436 NGLFY--YSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            G  +  YS G+        L+  +    YGT     YWIV+NSWG  WGE
Sbjct: 267 GGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGE 317



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 15/166 (9%)

Query: 489 ELTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           ++  ++   L  L+ ++LVDCD S N GCNGG MD A  +II+NGG+ ++  YPYK  + 
Sbjct: 164 DINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKD- 222

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID 605
           ER C V  +    V +  Y  +    E  ++K V  + P+SV + A G  +  YS G+  
Sbjct: 223 ER-CDVNRKNAKVVTIDSYEDVTPNSETSLQKAVRNQ-PVSVAIEAGGRAFQLYSSGIFT 280

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                C   A +H +  VGYG E  KD     YWIV+NSWG  WGE
Sbjct: 281 GK---CG-TALDHGVAAVGYGTENGKD-----YWIVRNSWGKSWGE 317



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 47/264 (17%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSD 101
           +  +  +H K Y++V +  RR+  F  N+   +++    D+G   F +  N+F DL++ +
Sbjct: 40  YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEE 99

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +  T L L +     +P  +   S      +  A           LPE+ DWR +G ++
Sbjct: 100 YRD-TYLGLRN-----KPRRERKVSDRYLAADNEA-----------LPESVDWRTKGAVA 142

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED-----LLRRHEN 216
           ++K+QG C  CWAFSA+  VE ++ I   +L  LS Q      +S  +     L+    +
Sbjct: 143 EIKDQGGCGSCWAFSAIAAVEDINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFD 202

Query: 217 FVTN---VEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQP----SL 269
           F+ N   ++  +DY  +       G ++  D++  + + +T   +DS  ED+ P    SL
Sbjct: 203 FIINNGGIDTEDDYPYK-------GKDERCDVNRKNAKVVT---IDS-YEDVTPNSETSL 251

Query: 270 QAPFSSNQTDTEM----RAFQFNS 289
           Q    +      +    RAFQ  S
Sbjct: 252 QKAVRNQPVSVAIEAGGRAFQLYS 275


>gi|390470786|ref|XP_003734355.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin W [Callithrix jacchus]
          Length = 373

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 143/315 (45%), Gaps = 69/315 (21%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDS 260
           ++ Y + E+  RR + F  N+ +A+  Q ED GTA FGV  F DL+E +  QL G     
Sbjct: 50  NRSYLTPEEHARRLDIFAHNLVQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQLYG---HQ 106

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR-AEGVISKVKEQGKCAC 319
                 PS+     S + +              + +P   DWR   G IS ++ QG C C
Sbjct: 107 RAAGGVPSMSRVVGSEEPE--------------ESVPHTCDWRKVAGAISFIRNQGNCLC 152

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWA +A G +EA+ +I       +SVQ+L+DC     GC+GG + DA   ++ N GVVS+
Sbjct: 153 CWAMAAAGNIEALWSINFLKFVNVSVQELLDCGRCGDGCHGGYVWDAFSTVLKNSGVVSE 212

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY--------GEEEEMKKWVATRGPLSV 431
             YP++A+     C            K Y+++ +         + + + +++ T GP++V
Sbjct: 213 SDYPFQANFGPHRC----------HAKTYNKVAWIMDFIFLPDDXQRIAQYLTTYGPITV 262

Query: 432 GMNANGLFYYSGGVIDL---------------------------------NQRLYGTSIP 458
            +NA  L  Y  GVI                                   +Q  +  S P
Sbjct: 263 TINAKHLQLYQKGVIKARPTTCDPQFVDHSVLLVGFGSEKSEGMGAKTVSSQSRHPRSTP 322

Query: 459 YWIVKNSWGSDWGEK 473
           YWI+KNSWG+ WGE+
Sbjct: 323 YWILKNSWGAQWGEE 337



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 30/176 (17%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           K   ++ ++L+DC     GC+GG + DA   ++ N GVVS+  YP++A+     C     
Sbjct: 172 KFVNVSVQELLDCGRCGDGCHGGYVWDAFSTVLKNSGVVSESDYPFQANFGPHRC----- 226

Query: 557 EGFKVKVKEYSRIPY--------GEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
                  K Y+++ +         + + + +++ T GP++V +NA  L  Y  GVI    
Sbjct: 227 -----HAKTYNKVAWIMDFIFLPDDXQRIAQYLTTYGPITVTINAKHLQLYQKGVIKARP 281

Query: 609 RLCNPKAQNHALIIVGYGEE------------EKKDGTSIPYWIVKNSWGSDWGEK 652
             C+P+  +H++++VG+G E            + +   S PYWI+KNSWG+ WGE+
Sbjct: 282 TTCDPQFVDHSVLLVGFGSEKSEGMGAKTVSSQSRHPRSTPYWILKNSWGAQWGEE 337



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 18/155 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F    ++ Y + E+  RR + F  N+ +A+  Q ED GTA F V  F DL++ +  Q
Sbjct: 42  FKFFQIQFNRSYLTPEEHARRLDIFAHNLVQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR-AEGVISKV 163
           L G           PS+     S + +              + +P   DWR   G IS +
Sbjct: 102 LYG---HQRAAGGVPSMSRVVGSEEPE--------------ESVPHTCDWRKVAGAISFI 144

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           + QG C CCWA +A G +EA+ +I       +SVQ
Sbjct: 145 RNQGNCLCCWAMAAAGNIEALWSINFLKFVNVSVQ 179


>gi|358339355|dbj|GAA47435.1| cathepsin F [Clonorchis sinensis]
          Length = 1157

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 176/382 (46%), Gaps = 83/382 (21%)

Query: 341 TELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEG 400
            E +VQQLVDCD  + GC GG   DA   +   GG+     YPY AS   + C    ++ 
Sbjct: 18  VESNVQQLVDCDHVDRGCEGGFPLDAFMAVQRLGGLQLSIDYPYIASR--QACQFNPKQA 75

Query: 401 FKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRL-------- 452
               V  ++ +P   E  + +++   GPLSVG+N+  L +Y+ G+++L            
Sbjct: 76  VAF-VTGFAALPR-NELLIAEYLHRNGPLSVGLNSRTLKFYNSGILNLAAEQCDPEALNH 133

Query: 453 ------YGT--SIPYWIVKNSWGSDWGEKVED---------KVGSSGNRT--------RD 487
                 +GT  S P+WI+KN++G DWGE++++            +  ++T        R 
Sbjct: 134 AALAVGFGTDESTPFWIIKNTFGKDWGEQLDEFEDERELYENFKAEYDKTYEGRDEEFRR 193

Query: 488 LELT------------------GVLPSKL-------------------SRLATEKLVDCD 510
           L LT                  G LPS                         + ++VDCD
Sbjct: 194 LYLTYKSPDEHEPIDRIHVQEVGQLPSYFDWREYGAVGPVRNQGQCGSCWAISAEVVDCD 253

Query: 511 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 570
            ++ GC+GG    A + +   GG+     YPY   +        +   F   +     +P
Sbjct: 254 HADHGCSGGFPIHAYECVQRLGGLELAVRYPYVGYQQY---CQADPRYFVAYINGSVALP 310

Query: 571 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEK 630
             + E++ K++AT GPLSV ++A  L YY  G+++ +   CNP+  NHA++ VG+G E+ 
Sbjct: 311 -KDSEQIAKFLATFGPLSVVLDARLLQYYRSGILNPSVAYCNPEELNHAVLSVGFGTEQ- 368

Query: 631 KDGTSIPYWIVKNSWGSDWGEK 652
                IPYWI+KNSWG  WGE+
Sbjct: 369 ----GIPYWIIKNSWGEQWGEQ 386



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 134/271 (49%), Gaps = 40/271 (14%)

Query: 220 NVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTGLNLDSTLEDIQPSLQAPFSSNQT 278
           N+++AE YQ+ + GTA++GV +F DL+  + Q+   GL LD             +S +Q+
Sbjct: 654 NIKQAEFYQTLERGTALYGVTQFSDLTGEEFQETFLGLRLDEQ-----------YSKSQS 702

Query: 279 DTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGN 338
                   +   +H   +PE +DWR  G +  V +QG C  CWAFS +G +E     +  
Sbjct: 703 --------YVKKKHSVSIPENYDWRPYGAVGPVLDQGHCGSCWAFSVIGNIEGQWFRKTG 754

Query: 339 SLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 398
            L  LS QQLVDCD S+ GC GG        I   GG+  +  Y Y   +   G      
Sbjct: 755 QLVSLSKQQLVDCDRSSRGCGGGYPPATYDSIRRIGGLEIELDYRYTGRD---GVCHQNP 811

Query: 399 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI----------DL 448
             F   V     +   +E  + +W++  GP+S+ +NA  L +Y  G++          D+
Sbjct: 812 RKFVAYVNSSVALT-KDENTIAEWLSYHGPISMALNARLLQFYVSGIMHPPAAYCPVKDI 870

Query: 449 NQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           +  +    +GT  ++P+WIVKNSWG+ WGE+
Sbjct: 871 SHAVLSVGFGTKGNVPFWIVKNSWGTLWGEE 901



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 20/192 (10%)

Query: 298 EAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGG 357
           ++FDWR  G +  V +Q +C   WAFSA+G +E  + ++ + L  LS QQLVDCD  + G
Sbjct: 465 DSFDWRDYGAVGPVLDQDRCGASWAFSAIGNIEGQYFMRVHRLLSLSEQQLVDCDRIDQG 524

Query: 358 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 417
           C GG    A + I   GG+  +  YPY   +    C       F V +    ++P  +E+
Sbjct: 525 CAGGTPYGAFEGIQQLGGLELEADYPYLGHQDN--CQSNPLR-FVVSINGSVQLP-KDED 580

Query: 418 EMKKWVATRGPLSVGMNANGLFYYSGGVI----------DLNQR------LYGTSIPYWI 461
           ++ +++   GPLSVG+N   L YYS G++          ++N         +   +PYW 
Sbjct: 581 QIAQYLFDHGPLSVGINGALLQYYSSGIMQPLWDNCNPAEMNHAGLAVGFGFEQDVPYWT 640

Query: 462 VKNSWGSDWGEK 473
           +KNSWG  WGE+
Sbjct: 641 IKNSWGMLWGEE 652



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 4/144 (2%)

Query: 295  DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS 354
            ++PE FDWR  G +  +++QG C  CWAFS +G +E     +   L  LS QQL+DCD  
Sbjct: 998  EIPERFDWRELGAVGPIQDQGDCGSCWAFSTIGNIEGQWFKKTGQLLTLSEQQLIDCDSV 1057

Query: 355  NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
            + GC GG   D    I+  GG+  +  YPY A++   G    E   F+  V +   +P  
Sbjct: 1058 DDGCGGGYPPDTYGDIVKMGGLELNADYPYIAAD---GVCKMERSKFRAYVNKSLVLP-T 1113

Query: 415  EEEEMKKWVATRGPLSVGMNANGL 438
            +E++   W++  GPLS G+NA+ L
Sbjct: 1114 KEDQQAVWLSKNGPLSAGINADYL 1137



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 9/151 (5%)

Query: 503 TEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVK 562
            ++LVDCD  + GC GG   DA   +   GG+     YPY AS   + C    ++     
Sbjct: 22  VQQLVDCDHVDRGCEGGFPLDAFMAVQRLGGLQLSIDYPYIASR--QACQFNPKQAVAF- 78

Query: 563 VKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALII 622
           V  ++ +P   E  + +++   GPLSVG+N+  L +Y+ G+++L    C+P+A NHA + 
Sbjct: 79  VTGFAALPR-NELLIAEYLHRNGPLSVGLNSRTLKFYNSGILNLAAEQCDPEALNHAALA 137

Query: 623 VGYGEEEKKDGTSIPYWIVKNSWGSDWGEKV 653
           VG+G +E     S P+WI+KN++G DWGE++
Sbjct: 138 VGFGTDE-----STPFWIIKNTFGKDWGEQL 163



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 92/194 (47%), Gaps = 41/194 (21%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSN 355
           LP  FDWR  G +  V+ QG+C  CWA SA                     ++VDCD ++
Sbjct: 218 LPSYFDWREYGAVGPVRNQGQCGSCWAISA---------------------EVVDCDHAD 256

Query: 356 GGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGE 415
            GC+GG    A + +   GG+     YPY   +        +   F   +     +P  +
Sbjct: 257 HGCSGGFPIHAYECVQRLGGLELAVRYPYVGYQQY---CQADPRYFVAYINGSVALP-KD 312

Query: 416 EEEMKKWVATRGPLSVGMNANGLFYYSGGVI----------DLNQRL----YGT--SIPY 459
            E++ K++AT GPLSV ++A  L YY  G++          +LN  +    +GT   IPY
Sbjct: 313 SEQIAKFLATFGPLSVVLDARLLQYYRSGILNPSVAYCNPEELNHAVLSVGFGTEQGIPY 372

Query: 460 WIVKNSWGSDWGEK 473
           WI+KNSWG  WGE+
Sbjct: 373 WIIKNSWGEQWGEQ 386



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 9/156 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++LVDCD  + GC GG    A + I   GG+  +  YPY   +    C     
Sbjct: 506 RLLSLSEQQLVDCDRIDQGCAGGTPYGAFEGIQQLGGLELEADYPYLGHQDN--CQSNPL 563

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
             F V +    ++P  +E+++ +++   GPLSVG+N   L YYS G++      CNP   
Sbjct: 564 R-FVVSINGSVQLP-KDEDQIAQYLFDHGPLSVGINGALLQYYSSGIMQPLWDNCNPAEM 621

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           NHA + VG+G E+      +PYW +KNSWG  WGE+
Sbjct: 622 NHAGLAVGFGFEQ-----DVPYWTIKNSWGMLWGEE 652



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 120/531 (22%), Positives = 208/531 (39%), Gaps = 122/531 (22%)

Query: 150 EAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED 209
           ++FDWR  G +  V +Q +C   WAFS      A+  I+G            + +  V  
Sbjct: 465 DSFDWRDYGAVGPVLDQDRCGASWAFS------AIGNIEG------------QYFMRVHR 506

Query: 210 LLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSL 269
           LL   E  + + ++ +   +  +    F            +QQL GL L++         
Sbjct: 507 LLSLSEQQLVDCDRIDQGCAGGTPYGAF----------EGIQQLGGLELEADY------- 549

Query: 270 QAPFSSNQTDTEMRAFQFN-SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGV 328
             P+  +Q + +    +F  S+     LP+  D  A+ +     + G  +       VG+
Sbjct: 550 --PYLGHQDNCQSNPLRFVVSINGSVQLPKDEDQIAQYLF----DHGPLS-------VGI 596

Query: 329 VEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASE 388
             A+     + +    +Q L D       CN   M+ A   +    G   +Q  PY   +
Sbjct: 597 NGALLQYYSSGI----MQPLWD------NCNPAEMNHAGLAV----GFGFEQDVPYWTIK 642

Query: 389 SERGCLVGEEEGFK--------------VKVKEYSRIPYGEEEEM-------------KK 421
           +  G L GEE+  K                V ++S +   E +E              + 
Sbjct: 643 NSWGMLWGEEDNIKQAEFYQTLERGTALYGVTQFSDLTGEEFQETFLGLRLDEQYSKSQS 702

Query: 422 WVATRGPLSVGMNANGLFYYSGGVIDLNQRLYGTSIPYWIVKNSWGSDWGEKVEDKVGSS 481
           +V  +  +S+  N +   Y + G + L+Q   G+   + ++ N  G  W  K        
Sbjct: 703 YVKKKHSVSIPENYDWRPYGAVGPV-LDQGHCGSCWAFSVIGNIEGQ-WFRKT------- 753

Query: 482 GNRTRDLELTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYP 541
                          +L  L+ ++LVDCD S+ GC GG        I   GG+  +  Y 
Sbjct: 754 --------------GQLVSLSKQQLVDCDRSSRGCGGGYPPATYDSIRRIGGLEIELDYR 799

Query: 542 YKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSG 601
           Y   +   G        F   V     +   +E  + +W++  GP+S+ +NA  L +Y  
Sbjct: 800 YTGRD---GVCHQNPRKFVAYVNSSVALT-KDENTIAEWLSYHGPISMALNARLLQFYVS 855

Query: 602 GVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           G++      C  K  +HA++ VG+G +      ++P+WIVKNSWG+ WGE+
Sbjct: 856 GIMHPPAAYCPVKDISHAVLSVGFGTK-----GNVPFWIVKNSWGTLWGEE 901



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 20/129 (15%)

Query: 72  NVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ-LTGLNLDSTLEDIQPSLQAPFSSNQT 130
           N+++AE YQ  + GTA++ V +F DL+  + Q+   GL LD             +S +Q+
Sbjct: 654 NIKQAEFYQTLERGTALYGVTQFSDLTGEEFQETFLGLRLDEQ-----------YSKSQS 702

Query: 131 DTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGN 190
                   +   +H   +PE +DWR  G +  V +QG C  CWAFS +G +E     +  
Sbjct: 703 --------YVKKKHSVSIPENYDWRPYGAVGPVLDQGHCGSCWAFSVIGNIEGQWFRKTG 754

Query: 191 NLTELSVQH 199
            L  LS Q 
Sbjct: 755 QLVSLSKQQ 763



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 497  KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
            +L  L+ ++L+DCD  + GC GG   D    I+  GG+  +  YPY A++   G    E 
Sbjct: 1042 QLLTLSEQQLIDCDSVDDGCGGGYPPDTYGDIVKMGGLELNADYPYIAAD---GVCKMER 1098

Query: 557  EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 596
              F+  V +   +P  +E++   W++  GPLS G+NA+ L
Sbjct: 1099 SKFRAYVNKSLVLP-TKEDQQAVWLSKNGPLSAGINADYL 1137



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%)

Query: 147  DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            ++PE FDWR  G +  +++QG C  CWAFS +G +E     +   L  LS Q 
Sbjct: 998  EIPERFDWRELGAVGPIQDQGDCGSCWAFSTIGNIEGQWFKKTGQLLTLSEQQ 1050



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
           LP  FDWR  G +  V+ QG+C  CWA SA  VV+  HA  G
Sbjct: 218 LPSYFDWREYGAVGPVRNQGQCGSCWAISAE-VVDCDHADHG 258


>gi|401430350|ref|XP_003886559.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|356491516|emb|CBZ40966.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 503

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 105 YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAARY-LNGA 162

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 163 AYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGACGS 209

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E    + G+ L  LS QQLV CD  N GC+GG M  A  +++   NG + 
Sbjct: 210 CWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLY 269

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +       C    E     ++  +  I    E+ M  W+A  GP+++ ++A+
Sbjct: 270 TEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDAS 328

Query: 437 GLFYYSGGVIDL---NQRLYGT---------SIPYWIVKNSWGSDWGEK 473
               Y  GV+      Q  +G           +PYW++KNSWG DWGE+
Sbjct: 329 SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 377



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L  L+ ++LV CD  N GC+GG M  A  +++ N  G + ++ +YPY +       C  
Sbjct: 229 ELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYVPECSN 288

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  +  I    E+ M  W+A  GP+++ ++A+    Y  GV+      C  
Sbjct: 289 SSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA----CIG 343

Query: 614 KAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
           K  NH +++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 344 KQLNHGVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 377



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 98  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAA 156

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              LN  +     +      +   + D                +P+A DWR +G ++ VK
Sbjct: 157 RY-LNGAAYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVK 202

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAVG +E    + G+ L  LS Q
Sbjct: 203 DQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQ 236


>gi|341876229|gb|EGT32164.1| hypothetical protein CAEBREN_11106 [Caenorhabditis brenneri]
          Length = 389

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 155/293 (52%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  +++ Y    +L RR+  FV NV++ E  + +  G  +  VN++ D ++ +L+++  +
Sbjct: 92  ILKYNRRYEQPGELSRRYLIFVKNVKEFEAEEKKHLGVDL-DVNEYTDWTDDELKRMV-I 149

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              + +               TD E   F+ + L  G   P + DWR +G ++ +K QG+
Sbjct: 150 EKKNVI---------------TDLEAVRFEGSYLESGVKRPASIDWRDQGKLTPIKNQGQ 194

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAF+ V  VEA HAI+   L  LS Q++VDCD  N GC+GG    A++++ +N G+
Sbjct: 195 CGSCWAFATVAAVEAQHAIKKGQLVSLSEQEMVDCDGRNNGCSGGYRPYAMRFVKEN-GL 253

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN-A 435
            S++ YPY A + ++ C + + +  +V + ++ R+    EE++  WV T+GP++ GMN  
Sbjct: 254 ESEKEYPYSALKHDQ-CFLKQNDT-RVFIDDF-RMLSTNEEDIANWVGTKGPVTFGMNVV 310

Query: 436 NGLFYYSGGVI-----DLNQRLYGT------------SIPYWIVKNSWGSDWG 471
             ++ Y  G+      D  ++  G             S  +WIVKNSWG+ WG
Sbjct: 311 KAMYSYRSGIFNPSSEDCAEKSMGAHALTIVGYGGEGSSAFWIVKNSWGTSWG 363



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 96/156 (61%), Gaps = 11/156 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ +++VDCD  N GC+GG    A++++ +N G+ S++ YPY A + ++ C + + 
Sbjct: 217 QLVSLSEQEMVDCDGRNNGCSGGYRPYAMRFVKEN-GLESEKEYPYSALKHDQ-CFLKQN 274

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN-ANGLFYYSGGVIDLNQRLCNPKA 615
           +  +V + ++ R+    EE++  WV T+GP++ GMN    ++ Y  G+ + +   C  K+
Sbjct: 275 DT-RVFIDDF-RMLSTNEEDIANWVGTKGPVTFGMNVVKAMYSYRSGIFNPSSEDCAEKS 332

Query: 616 QN-HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
              HAL IVGYG E    G+S  +WIVKNSWG+ WG
Sbjct: 333 MGAHALTIVGYGGE----GSS-AFWIVKNSWGTSWG 363



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 21/182 (11%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA 76
           L    +   +  SN+ Q   Y       F +F+  +++ Y    +L RR+  FV NV++ 
Sbjct: 64  LTVLFVHKRIENSNMEQEAKYFR----MFNDFILKYNRRYEQPGELSRRYLIFVKNVKEF 119

Query: 77  EDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRA 136
           E  +++  G  + +VN++ D +D +L+++  +   + +               TD E   
Sbjct: 120 EAEEKKHLGVDL-DVNEYTDWTDDELKRMV-IEKKNVI---------------TDLEAVR 162

Query: 137 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELS 196
           F+ + L  G   P + DWR +G ++ +K QG+C  CWAF+ V  VEA HAI+   L  LS
Sbjct: 163 FEGSYLESGVKRPASIDWRDQGKLTPIKNQGQCGSCWAFATVAAVEAQHAIKKGQLVSLS 222

Query: 197 VQ 198
            Q
Sbjct: 223 EQ 224


>gi|42564153|gb|AAS20589.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 322

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 144/294 (48%), Gaps = 44/294 (14%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS---EDSGTAVFGVNKFFDLSESDLQQLT 254
           Q H K Y S+ +   R   F  N+   E + +   E   T    V +F D++  + ++  
Sbjct: 28  QTHGKTYKSLLEERTRFGIFQNNLRTIEKHNAKYEEGKVTYYMAVTQFADMTRDEFRKKL 87

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
           GL       + +P+L A       D E              LPE  DW  +G +  VK Q
Sbjct: 88  GLQ-----NNRRPNLNATLRVFPEDLE--------------LPEQIDWTEKGAVLPVKNQ 128

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGC-NGGRMDDALQYII 371
           G C  CWAFS  G +E  +AI     T LS QQL+DC  S  NG C +GG M +A  YII
Sbjct: 129 GNCRSCWAFSTTGSLEGQNAIHNKVKTPLSEQQLLDCSASYGNGDCDDGGLMTEAFDYII 188

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           DN G+ ++ +YPY    +E  C    ++   V++K Y ++   +E+E+KK V T GP+SV
Sbjct: 189 DN-GIEAESSYPYVEQMTE--CQYDAKKTI-VQIKGYKKL-LADEDELKKAVGTVGPISV 243

Query: 432 GMNANGLFYYSGGVIDLNQRLYG-------------TSIPYWIVKNSWGSDWGE 472
           GM++  L  Y GGV+D +Q  +G                 +W VKNSWG+ WGE
Sbjct: 244 GMSSENLHMYGGGVLD-DQCYFGMDHAVLVVGYGEANGKKFWKVKNSWGTTWGE 296



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 17/154 (11%)

Query: 501 LATEKLVDCDMS--NGGCN-GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L+ ++L+DC  S  NG C+ GG M +A  YIIDNG + ++ +YPY    +E  C    ++
Sbjct: 157 LSEQQLLDCSASYGNGDCDDGGLMTEAFDYIIDNG-IEAESSYPYVEQMTE--CQYDAKK 213

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
              V++K Y ++   +E+E+KK V T GP+SVGM++  L  Y GGV+D           +
Sbjct: 214 TI-VQIKGYKKL-LADEDELKKAVGTVGPISVGMSSENLHMYGGGVLDDQCYF----GMD 267

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           HA+++VGYGE   K      +W VKNSWG+ WGE
Sbjct: 268 HAVLVVGYGEANGK-----KFWKVKNSWGTTWGE 296



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 22/159 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRH---ENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDS 100
           +++ F + H K Y S+ +   R    +N +  +EK      E   T    V +F D++  
Sbjct: 22  QWVAFKQTHGKTYKSLLEERTRFGIFQNNLRTIEKHNAKYEEGKVTYYMAVTQFADMTRD 81

Query: 101 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
           + ++  GL       + +P+L A       D E              LPE  DW  +G +
Sbjct: 82  EFRKKLGLQ-----NNRRPNLNATLRVFPEDLE--------------LPEQIDWTEKGAV 122

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
             VK QG C  CWAFS  G +E  +AI     T LS Q 
Sbjct: 123 LPVKNQGNCRSCWAFSTTGSLEGQNAIHNKVKTPLSEQQ 161


>gi|13124011|sp|Q9YWK4.1|CATV_NPVBS RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|3882976|gb|AAC77812.1| cathepsin [Buzura suppressaria NPV]
          Length = 331

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 168/332 (50%), Gaps = 45/332 (13%)

Query: 183 AMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKF 242
           A   ++  +  E  + +++K+Y+   +  RR   F   +E+  +Y++  + +AV+ +NKF
Sbjct: 21  AYDLLKAGDYFETFLANYNKMYNDTSEKERRFSIFQQTLEEI-NYKNRLNDSAVYQINKF 79

Query: 243 FDLSESDL-QQLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPE 298
            DLS++++  + TGLN+     +   ++   Q P                        P 
Sbjct: 80  ADLSKNEIISKYTGLNMPVQTTNFCKTIVIDQPPGKG---------------------PL 118

Query: 299 AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGC 358
            FDWR +  ++ +K Q  C  CWAF+ +  +E+ +AI+ N   +LS QQ++DCD  + GC
Sbjct: 119 NFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDYVDMGC 178

Query: 359 NGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEE 418
           +GG +  A + +I  G +V +  YPY A  ++   L G+E G  VKVK   R     EE+
Sbjct: 179 DGGLLHTAFEQMIQMGELVQEHEYPY-AGVNKPCELRGDETGV-VKVKGCYRYVVFREEK 236

Query: 419 MKKWVATRGPLSVGMNANGLFYYSGGVID------LNQRL----YGT--SIPYWIVKNSW 466
           +K  +   GP+ + ++A+G+  Y  G+I       LN  +    YG   ++P+W  KN+W
Sbjct: 237 LKDLLRAVGPIPMAIDASGIVNYHHGIIHYCENYGLNHAVLLVGYGVENNVPFWTFKNTW 296

Query: 467 GSDWGE----KVEDKVGSSGNRTRDLELTGVL 494
           G DWGE    +V   V + G  T +L  + V+
Sbjct: 297 GKDWGEEGYFRVRQNVDACG-MTNELASSAVI 327



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 87/152 (57%), Gaps = 11/152 (7%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ ++++DCD  + GC+GG +  A + +I  G +V +  YPY A  ++   L G+E G  
Sbjct: 163 LSEQQMIDCDYVDMGCDGGLLHTAFEQMIQMGELVQEHEYPY-AGVNKPCELRGDETGV- 220

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           VKVK   R     EE++K  +   GP+ + ++A+G+  Y  G+I      C     NHA+
Sbjct: 221 VKVKGCYRYVVFREEKLKDLLRAVGPIPMAIDASGIVNYHHGII----HYCENYGLNHAV 276

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           ++VGYG E      ++P+W  KN+WG DWGE+
Sbjct: 277 LLVGYGVE-----NNVPFWTFKNTWGKDWGEE 303



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 45/232 (19%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL-Q 103
           F  F+ +++K+Y+   +  RR   F   +E+  +Y+   + +AV+++NKF DLS +++  
Sbjct: 31  FETFLANYNKMYNDTSEKERRFSIFQQTLEEI-NYKNRLNDSAVYQINKFADLSKNEIIS 89

Query: 104 QLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
           + TGLN+     +   ++   Q P                        P  FDWR +  +
Sbjct: 90  KYTGLNMPVQTTNFCKTIVIDQPPGKG---------------------PLNFDWRQQNKV 128

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH----------------HDKVY 204
           + +K Q  C  CWAF+ +  +E+ +AI+ N   +LS Q                 H    
Sbjct: 129 TSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDYVDMGCDGGLLHTAFE 188

Query: 205 SSVE--DLLRRHENFVTNVEKAEDYQSEDSGTA-VFGVNKFFDLSESDLQQL 253
             ++  +L++ HE     V K  + + +++G   V G  ++    E  L+ L
Sbjct: 189 QMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDL 240


>gi|195429415|ref|XP_002062758.1| GK19626 [Drosophila willistoni]
 gi|194158843|gb|EDW73744.1| GK19626 [Drosophila willistoni]
          Length = 341

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 135/260 (51%), Gaps = 41/260 (15%)

Query: 237 FGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL 296
             +NK+ D+   + ++        T+     +L     S  TD       F S  H   L
Sbjct: 76  LALNKYADMLHHEFRE--------TMNGFNYTLHKQLRS--TDESFTGVTFISPEH-VKL 124

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-- 354
           P A DWR +G +++VK+QG C  CWAFS+ G +E  H  +  +L  LS Q LVDC     
Sbjct: 125 PTAVDWRTKGAVTEVKDQGHCGSCWAFSSTGAIEGQHFRKSGTLVSLSEQNLVDCSTKYG 184

Query: 355 NGGCNGGRMDDALQYIIDNGGVVSDQAYPYK----ASESERGCLVGEEEGFKVKVKEYSR 410
           N GCNGG MD+A +Y+ DNGG+ ++++Y Y+    +   ++  +   + GF       + 
Sbjct: 185 NNGCNGGLMDNAFRYVKDNGGIDTEKSYAYEGIDDSCHFDKNSIGATDRGF-------AD 237

Query: 411 IPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVID--------LNQRL----YGT- 455
           IP G E+++ + VAT GP+SV ++A+     +YS GV D        L+  +    YGT 
Sbjct: 238 IPQGNEKKLAQAVATIGPVSVAIDASQQSFQFYSEGVYDEPNCSAENLDHGVLVVGYGTE 297

Query: 456 --SIPYWIVKNSWGSDWGEK 473
                YW+VKNSWG+ WG+K
Sbjct: 298 KDGSDYWLVKNSWGTTWGDK 317



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 99/163 (60%), Gaps = 21/163 (12%)

Query: 498 LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYK----ASESERGC 551
           L  L+ + LVDC     N GCNGG MD+A +Y+ DNGG+ ++++Y Y+    +   ++  
Sbjct: 168 LVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYVKDNGGIDTEKSYAYEGIDDSCHFDKNS 227

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQR 609
           +   + GF       + IP G E+++ + VAT GP+SV ++A+     +YS GV D  + 
Sbjct: 228 IGATDRGF-------ADIPQGNEKKLAQAVATIGPVSVAIDASQQSFQFYSEGVYD--EP 278

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C+ +  +H +++VGYG E  KDG+   YW+VKNSWG+ WG+K
Sbjct: 279 NCSAENLDHGVLVVGYGTE--KDGSD--YWLVKNSWGTTWGDK 317



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)

Query: 24  VALLESNIFQTRGYLNSPVTR--FLNFMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQ 80
           + LL + +  T+    S + R  +  F  +H K Y+   +   R + F  N    A+  Q
Sbjct: 6   ITLLIALVAMTQAVSYSELVREEWNTFKLEHRKNYADSTEETFRMKIFNENKHHIAKHNQ 65

Query: 81  REDSGTAVFEV--NKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
           R  +G   +++  NK+ D+   + ++        T+     +L     S  TD       
Sbjct: 66  RYATGEVSYKLALNKYADMLHHEFRE--------TMNGFNYTLHKQLRS--TDESFTGVT 115

Query: 139 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           F S  H   LP A DWR +G +++VK+QG C  CWAFS+ G +E  H  +   L  LS Q
Sbjct: 116 FISPEH-VKLPTAVDWRTKGAVTEVKDQGHCGSCWAFSSTGAIEGQHFRKSGTLVSLSEQ 174


>gi|30023547|gb|AAO48766.2| cathepsin L-like cysteine proteinase [Tenebrio molitor]
          Length = 337

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 158/319 (49%), Gaps = 40/319 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTN---VEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQLTG 255
           H+K Y S  +   R + F+ N   V K     ++   +   G+NK+ D+   + +Q L G
Sbjct: 34  HNKQYQSETEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADMLHHEFVQVLNG 93

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
            N            ++   S ++D  +      +++    LP   DWR +G ++ VK+QG
Sbjct: 94  FN----------RTKSGLRSGESDDSVTFLPPANVQ----LPGQIDWRDKGAVTPVKDQG 139

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDN 373
           +C  CW+FSA G +E  H  Q   L  LS Q LVDC     N GCNGG MD+A +YI  N
Sbjct: 140 QCGSCWSFSATGSLEGQHFRQSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKAN 199

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++QAYPYKA E E+     + +G     + Y  I  G E++++  VAT GP+SV +
Sbjct: 200 GGIDTEQAYPYKA-EDEKCHYKPKNKG--ATDRGYVDIESGNEDKLQSAVATVGPVSVAI 256

Query: 434 NANGLFY--YSGGVI--------DLNQRL----YGT---SIPYWIVKNSWGSDWGEKVED 476
           +A+   +  YSGGV          L+  +    YGT      YW+VKNSWG  WG++   
Sbjct: 257 DASHQSFQLYSGGVYYEPDCSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYI 316

Query: 477 KVGSSGNRTRDLELTGVLP 495
           K+  + N    +      P
Sbjct: 317 KMARNRNNNCGIATEASYP 335



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 98/160 (61%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD+A +YI  NGG+ ++QAYPYKA E E+     
Sbjct: 163 KLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKANGGIDTEQAYPYKA-EDEKCHYKP 221

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
           + +G     + Y  I  G E++++  VAT GP+SV ++A+   +  YSGGV    +  C+
Sbjct: 222 KNKG--ATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGV--YYEPDCS 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               +H +++VGYG E+  DGT   YW+VKNSWG  WG++
Sbjct: 278 ASQLDHGVLVVGYGTED--DGTD--YWLVKNSWGKSWGDQ 313



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 18/156 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQR-EDSGTAVFE--VNKFFDLSDSD-LQ 103
           F   H+K Y S  +   R + F+ N      + +    G   F+  +NK+ D+   + +Q
Sbjct: 30  FKMTHNKQYQSETEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADMLHHEFVQ 89

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            L G N            ++   S ++D  +      +++    LP   DWR +G ++ V
Sbjct: 90  VLNGFN----------RTKSGLRSGESDDSVTFLPPANVQ----LPGQIDWRDKGAVTPV 135

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG+C  CW+FSA G +E  H  Q   L  LS Q+
Sbjct: 136 KDQGQCGSCWSFSATGSLEGQHFRQSGKLVSLSEQN 171


>gi|307175095|gb|EFN65237.1| Cathepsin L [Camponotus floridanus]
          Length = 372

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 151/300 (50%), Gaps = 45/300 (15%)

Query: 199 HHDKVYSSVEDLLRRHENFVTN----VEKAEDYQSEDSGTAVFGVNKFFDLSESDL-QQL 253
           HH KVY S  +   R + F+ N    VE    Y+ ++    + G+NK+ D+   +L   L
Sbjct: 69  HHKKVYKSPIEEGYRMKIFLDNKRKIVEHNRKYEMKEVNYKL-GMNKYGDMLHHELINTL 127

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
            G N   T+ + Q  + A F                     +LP++ DWR +G ++ +K+
Sbjct: 128 NGFNKSVTVSEEQ-LIGATFIEPANV---------------ELPKSVDWRKKGAVTAIKD 171

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYII 371
           QG+C  CWAFS+ G +E  H  Q   L  LS Q L+DC     N GCNGG MD A +YI 
Sbjct: 172 QGQCGSCWAFSSTGALEGQHFRQSGVLVSLSEQNLIDCSGKYGNNGCNGGLMDYAFRYIK 231

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           +N G+ ++++YPY+A   +  C    +      V  +  IP G+E+++K  VAT GP+SV
Sbjct: 232 ENKGLDTEKSYPYEAENDQ--CRYNPKNSGASDVG-FVDIPEGDEDKLKAAVATIGPISV 288

Query: 432 GMNAN--GLFYYSGGVI--------DLNQRLY--------GTSIPYWIVKNSWGSDWGEK 473
            ++A+     +YS GV         +L+  +         GT   YW+VKNSWG  WGEK
Sbjct: 289 AIDASHESFHFYSEGVYYEPECSPANLDHGVLIVGYGTDSGTGEDYWLVKNSWGETWGEK 348



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 93/159 (58%), Gaps = 12/159 (7%)

Query: 498 LSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ + L+DC     N GCNGG MD A +YI +N G+ ++++YPY+A   +  C    
Sbjct: 198 LVSLSEQNLIDCSGKYGNNGCNGGLMDYAFRYIKENKGLDTEKSYPYEAENDQ--CRYNP 255

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNP 613
           +      V  +  IP G+E+++K  VAT GP+SV ++A+     +YS GV    +  C+P
Sbjct: 256 KNSGASDVG-FVDIPEGDEDKLKAAVATIGPISVAIDASHESFHFYSEGV--YYEPECSP 312

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              +H ++IVGYG +    GT   YW+VKNSWG  WGEK
Sbjct: 313 ANLDHGVLIVGYGTD---SGTGEDYWLVKNSWGETWGEK 348



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 43/226 (19%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAV---FEVNKFFDLSDSDL-QQLTG 107
           H KVY S  +   R + F+ N  K  ++ R+     V     +NK+ D+   +L   L G
Sbjct: 70  HKKVYKSPIEEGYRMKIFLDNKRKIVEHNRKYEMKEVNYKLGMNKYGDMLHHELINTLNG 129

Query: 108 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 167
            N   T+ + Q  + A F                     +LP++ DWR +G ++ +K+QG
Sbjct: 130 FNKSVTVSEEQ-LIGATFIEPANV---------------ELPKSVDWRKKGAVTAIKDQG 173

Query: 168 KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH---------HDKVYSSVEDLLRRH--EN 216
           +C  CWAFS+ G +E  H  Q   L  LS Q+         ++     + D   R+  EN
Sbjct: 174 QCGSCWAFSSTGALEGQHFRQSGVLVSLSEQNLIDCSGKYGNNGCNGGLMDYAFRYIKEN 233

Query: 217 FVTNVEKAEDYQSE---------DSGTAVFGVNKFFDLSESDLQQL 253
              + EK+  Y++E         +SG +  G   F D+ E D  +L
Sbjct: 234 KGLDTEKSYPYEAENDQCRYNPKNSGASDVG---FVDIPEGDEDKL 276


>gi|219687002|dbj|BAH08632.1| daikon cysteine protease RD21 [Raphanus sativus]
          Length = 289

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/194 (43%), Positives = 113/194 (58%), Gaps = 18/194 (9%)

Query: 294 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM 353
           D +PE+ DWR EG ++ VK+QG C  CWAFS +G VE ++ I    L  LS Q+LVDCD 
Sbjct: 1   DAIPESVDWRKEGAVAAVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVDCDT 60

Query: 354 S-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
           S N GCNGG MD A ++II NGG+ +++ YPYKA++    C    +    V +  Y  +P
Sbjct: 61  SYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYKAADGR--CDQNRKNAKVVTIDAYEDVP 118

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID------LNQRL----YGT--SIP 458
              E  +KK +A + P+SV + A G  +  YS GV D      L+  +    YGT     
Sbjct: 119 ENNEAALKKALANQ-PISVAIEAGGRAFQLYSSGVFDGTCGTELDHGVVAVGYGTENGKD 177

Query: 459 YWIVKNSWGSDWGE 472
           YWIV+NSWG  WGE
Sbjct: 178 YWIVRNSWGGSWGE 191



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 92/162 (56%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ +++ YPYKA++    C
Sbjct: 42  IVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYKAADGR--C 99

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
               +    V +  Y  +P   E  +KK +A + P+SV + A G  +  YS GV D    
Sbjct: 100 DQNRKNAKVVTIDAYEDVPENNEAALKKALANQ-PISVAIEAGGRAFQLYSSGVFD---G 155

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C  +  +H ++ VGYG E  KD     YWIV+NSWG  WGE
Sbjct: 156 TCGTEL-DHGVVAVGYGTENGKD-----YWIVRNSWGGSWGE 191



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 35/54 (64%)

Query: 146 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           D +PE+ DWR EG ++ VK+QG C  CWAFS +G VE ++ I   +L  LS Q 
Sbjct: 1   DAIPESVDWRKEGAVAAVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQE 54


>gi|341878328|gb|EGT34263.1| CBN-CPL-1 protein [Caenorhabditis brenneri]
          Length = 336

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 153/309 (49%), Gaps = 49/309 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS-GTAVF--GVNKFFDLSESDLQQLTG- 255
           +DK YS  E+     E FV NV   E++  +   G   F  G+N   DL  S  ++L G 
Sbjct: 38  YDKEYSESEEQTYM-EAFVKNVIHIENHNRDHRLGRKTFEMGLNHIADLPFSQYRKLNGY 96

Query: 256 --LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
             L  DS +++   S  APF+                     +P+  DWR   +++ VK 
Sbjct: 97  RRLFGDSRIKN-SSSFLAPFNVQ-------------------VPDEVDWRDTHLVTDVKN 136

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYII 371
           QG C  CWAFSA G +E  HA +   L  LS Q LVDC     N GCNGG MD A +YI 
Sbjct: 137 QGMCGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIR 196

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           DN GV ++++YPYK  + +  C   ++       K Y   P G+EE++K  VAT+GP+S+
Sbjct: 197 DNHGVDTEESYPYKGRDMK--CHFNKKT-IGADDKGYVDTPEGDEEQLKIAVATQGPISI 253

Query: 432 GMNA---------NGLFY---YSGGVIDLNQRL--YGTSIP---YWIVKNSWGSDWGEKV 474
            ++A          G++Y    S   +D    L  YGT      YW+VKNSWG+ WGEK 
Sbjct: 254 AIDAGHRSFQLYKKGVYYDEECSSEELDHGVLLVGYGTDPEHGDYWLVKNSWGTGWGEKG 313

Query: 475 EDKVGSSGN 483
             ++  + N
Sbjct: 314 YIRIARNRN 322



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 91/160 (56%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           +L  L+ + LVDC     N GCNGG MD A +YI DN GV ++++YPYK  + +  C   
Sbjct: 162 QLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHGVDTEESYPYKGRDMK--CHFN 219

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
           ++       K Y   P G+EE++K  VAT+GP+S+ ++A    +  Y  GV       C+
Sbjct: 220 KKT-IGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGV--YYDEECS 276

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +++VGYG     D     YW+VKNSWG+ WGEK
Sbjct: 277 SEELDHGVLLVGYG----TDPEHGDYWLVKNSWGTGWGEK 312



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 27/167 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS-GTAVFE--VNKF 94
           + S + ++ ++  D+DK YS  E+     E FV NV   E++ R+   G   FE  +N  
Sbjct: 24  IESAIEKWDDYKEDYDKEYSESEEQTYM-EAFVKNVIHIENHNRDHRLGRKTFEMGLNHI 82

Query: 95  FDLSDSDLQQLTG---LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEA 151
            DL  S  ++L G   L  DS +++   S  APF+                     +P+ 
Sbjct: 83  ADLPFSQYRKLNGYRRLFGDSRIKN-SSSFLAPFNVQ-------------------VPDE 122

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            DWR   +++ VK QG C  CWAFSA G +E  HA +   L  LS Q
Sbjct: 123 VDWRDTHLVTDVKNQGMCGSCWAFSATGALEGQHARKLGQLVSLSEQ 169


>gi|357437715|ref|XP_003589133.1| Cysteine proteinase [Medicago truncatula]
 gi|87240770|gb|ABD32628.1| Granulin; Peptidase C1A, papain [Medicago truncatula]
 gi|355478181|gb|AES59384.1| Cysteine proteinase [Medicago truncatula]
          Length = 474

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 150/292 (51%), Gaps = 37/292 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           H K Y+ + +  +R E F  N++  +++   +S T   G+ +F DL+  + + +  G  +
Sbjct: 62  HGKSYNGLGEKDKRFEIFKDNLKFIDEHNGLNS-TYRLGLTRFADLTNEEYRSKFLGTKI 120

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFN--SLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           D                N+   ++   + N  + R GD LPE+ DWR EG +  VK+Q  
Sbjct: 121 DP---------------NRRMKKLGGSKSNRYAPRVGDKLPESVDWRKEGAVVGVKDQAS 165

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFSA+  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II NGG
Sbjct: 166 CGSCWAFSAIAAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIISNGG 225

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + S+  YPYKA +    C    +    V + +Y  +P  +E  ++K VA + P++V +  
Sbjct: 226 IDSEDDYPYKAVDGR--CDQNRKNAKVVTIDDYEDVPAYDELALQKAVANQ-PIAVAVEG 282

Query: 436 NG----LFYY------SGGVID--LNQRLYGT--SIPYWIVKNSWGSDWGEK 473
            G    L+ Y       G  +D  +    YGT     YWIV+NSWG  WGE+
Sbjct: 283 GGREFQLYEYGVFTGRCGTALDHGVAAVGYGTENGKDYWIVRNSWGGSWGEQ 334



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 90/166 (54%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ S+  YPYKA +  
Sbjct: 181 INKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIISNGGIDSEDDYPYKAVDGR 240

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V + +Y  +P  +E  ++K VA + P++V +   G  +  Y  GV   
Sbjct: 241 --CDQNRKNAKVVTIDDYEDVPAYDELALQKAVANQ-PIAVAVEGGGREFQLYEYGVF-- 295

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C   A +H +  VGYG E  KD     YWIV+NSWG  WGE+
Sbjct: 296 -TGRCG-TALDHGVAAVGYGTENGKD-----YWIVRNSWGGSWGEQ 334



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 19/160 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +T +  ++  H K Y+ + +  +R E F  N++  +++   +S T    + +F DL++ +
Sbjct: 52  LTMYEEWLVKHGKSYNGLGEKDKRFEIFKDNLKFIDEHNGLNS-TYRLGLTRFADLTNEE 110

Query: 102 LQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN--SLRHGDDLPEAFDWRAEG 158
            + +  G  +D                N+   ++   + N  + R GD LPE+ DWR EG
Sbjct: 111 YRSKFLGTKIDP---------------NRRMKKLGGSKSNRYAPRVGDKLPESVDWRKEG 155

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +  VK+Q  C  CWAFSA+  VE ++ I   +L  LS Q
Sbjct: 156 AVVGVKDQASCGSCWAFSAIAAVEGINKIVTGDLISLSEQ 195


>gi|158300877|ref|XP_001689282.1| AGAP011828-PA [Anopheles gambiae str. PEST]
 gi|157013372|gb|EDO63348.1| AGAP011828-PA [Anopheles gambiae str. PEST]
          Length = 344

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 117/355 (32%), Positives = 168/355 (47%), Gaps = 58/355 (16%)

Query: 178 VGVVEAMHAIQGNNL-----TELSVQHHDKVYSSVEDLLRRHENFVTNVEK-AEDYQSED 231
           +G V A +AI    L     T   +QH  K  S  E+ +R  + +V N  K A+  Q  D
Sbjct: 9   LGFVAAANAISIFELVKEEWTAFKLQHRKKYDSETEERIRM-KIYVQNKHKIAKHNQRYD 67

Query: 232 SGTAVFG--VNKFFDL-SESDLQQLTGLN---------LDSTLEDIQPSLQAPFSSNQTD 279
            G   F   VNK+ DL  E  +  L G N         L   L+ I+  +     +N   
Sbjct: 68  LGQEKFRLRVNKYADLLHEEFVHTLNGFNRSVSGKGQLLRGELKPIEEPVTWIEPANV-- 125

Query: 280 TEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNS 339
                          D+P A DWR +G +++VK+QG C  CW+FSA G +E  H  +   
Sbjct: 126 ---------------DVPTAMDWRTKGAVTQVKDQGHCGSCWSFSATGALEGQHFRKTGK 170

Query: 340 LTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 397
           L  LS Q LVDC     N GCNGG MD A QYI DN G+ ++++YPY+A + E  C    
Sbjct: 171 LVSLSEQNLVDCSQKYGNNGCNGGMMDFAFQYIKDNKGIDTEKSYPYEAIDDE--CHY-N 227

Query: 398 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI--------D 447
            +      K +  IP G E+ + K +AT GP+SV ++A+     +YS GV          
Sbjct: 228 PKAVGATDKGFVDIPQGNEKALMKALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQ 287

Query: 448 LNQRL----YGTS---IPYWIVKNSWGSDWGEKVEDKVGSSGNRTRDLELTGVLP 495
           L+  +    YGT+     YW+VKNSWG+ WG++   K+  + +    +  T   P
Sbjct: 288 LDHGVLAVGYGTTEDGEDYWLVKNSWGTTWGDQGYVKMARNRDNHCGIATTASYP 342



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 93/160 (58%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD A QYI DN G+ ++++YPY+A + E  C   
Sbjct: 170 KLVSLSEQNLVDCSQKYGNNGCNGGMMDFAFQYIKDNKGIDTEKSYPYEAIDDE--CHY- 226

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCN 612
             +      K +  IP G E+ + K +AT GP+SV ++A+     +YS GV    Q  C+
Sbjct: 227 NPKAVGATDKGFVDIPQGNEKALMKALATVGPVSVAIDASHESFQFYSEGVYYEPQ--CD 284

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H ++ VGYG  E  DG    YW+VKNSWG+ WG++
Sbjct: 285 SEQLDHGVLAVGYGTTE--DGED--YWLVKNSWGTTWGDQ 320



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 30/165 (18%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSD-LQ 103
           F   H K Y S  +   R + +V N  K A+  QR D G   F   VNK+ DL   + + 
Sbjct: 31  FKLQHRKKYDSETEERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYADLLHEEFVH 90

Query: 104 QLTGLN---------LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 154
            L G N         L   L+ I+  +     +N                  D+P A DW
Sbjct: 91  TLNGFNRSVSGKGQLLRGELKPIEEPVTWIEPANV-----------------DVPTAMDW 133

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           R +G +++VK+QG C  CW+FSA G +E  H  +   L  LS Q+
Sbjct: 134 RTKGAVTQVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQN 178


>gi|343475823|emb|CCD12886.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 160/320 (50%), Gaps = 39/320 (12%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVNVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  P   DWR +G ++ VK+QGKC   WAFSA+G +E    I G+ LT LS Q LV
Sbjct: 124 ----GRPPMTVDWRKKGAVTPVKDQGKCDSSWAFSAIGNIEGQWKIAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESE-RGC-LVGEEEGFKVKV 405
            CD ++ GC  G  D A Q+I+  + G V ++Q+YPY +       C + G+  G K+  
Sbjct: 180 SCDTNDLGCELGLKDPAFQWILWSNKGNVFTEQSYPYASGGGNVPTCDMSGKVVGAKISN 239

Query: 406 KEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID--LNQRL-YGTSI----- 457
             Y  +P  +E+ + +W+A +GP+++ ++A     Y+GGV+   +++RL YG  +     
Sbjct: 240 MRY--LPL-DEDTIAEWLARKGPVAIAVDATSFQRYTGGVLTSCISRRLNYGALLVGYDD 296

Query: 458 ----PYWIVKNSWGSDWGEK 473
               PYWI+KNSWG  WGE+
Sbjct: 297 TSKPPYWIIKNSWGKGWGEE 316



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 16/160 (10%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESE-RGC-L 552
           +L+ L+ + LV CD ++ GC  G  D A Q+I+  + G V ++Q+YPY +       C +
Sbjct: 169 ELTSLSEQMLVSCDTNDLGCELGLKDPAFQWILWSNKGNVFTEQSYPYASGGGNVPTCDM 228

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCN 612
            G+  G K+    Y  +P  +E+ + +W+A +GP+++ ++A     Y+GGV+      C 
Sbjct: 229 SGKVVGAKISNMRY--LPL-DEDTIAEWLARKGPVAIAVDATSFQRYTGGVLTS----CI 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  N+  ++VGY +  K      PYWI+KNSWG  WGE+
Sbjct: 282 SRRLNYGALLVGYDDTSKP-----PYWIIKNSWGKGWGEE 316



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                P   DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVNVST-------------GRPPMTVDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QGKC   WAFSA+G +E    I G+ LT LS Q
Sbjct: 142 KDQGKCDSSWAFSAIGNIEGQWKIAGHELTSLSEQ 176


>gi|401416324|ref|XP_003872657.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488881|emb|CBZ24131.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 443

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E    + G+ L  LS QQLV CD  N GC+GG M  A  +++   NG + 
Sbjct: 150 CWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLH 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +       C    E     ++  +  I    E+ M  W+A  GP+++ ++A+
Sbjct: 210 TEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDAS 268

Query: 437 GLFYYSGGVIDL---NQRLYGT---------SIPYWIVKNSWGSDWGEK 473
               Y  GV+      Q  +G           +PYW++KNSWG DWGE+
Sbjct: 269 SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L  L+ ++LV CD  N GC+GG M  A  +++ N  G + ++ +YPY +       C  
Sbjct: 169 ELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  +  I    E+ M  W+A  GP+++ ++A+    Y  GV+      C  
Sbjct: 229 SSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
           K  NH +++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 284 KQLNHGVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAA 96

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              LN  +     +      +   + D                +P+A DWR +G ++ VK
Sbjct: 97  RY-LNGAAYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAVG +E    + G+ L  LS Q
Sbjct: 143 DQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQ 176


>gi|224077886|ref|XP_002305451.1| predicted protein [Populus trichocarpa]
 gi|222848415|gb|EEE85962.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 156/331 (47%), Gaps = 64/331 (19%)

Query: 180 VVEAMHAIQGNNLTELSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSED 231
           VV+   A   N L+  + QHH         K Y S E+   R   F  N+ +A  +Q  D
Sbjct: 34  VVDGQDASSSNLLS--AEQHHFSLFKSKFKKSYGSQEEHDYRFSVFKANLRRAARHQELD 91

Query: 232 SGTAVFGVNKFFDLSESDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSL 290
             TA  GV +F DL+ ++  +Q+ GL            L+ P  +N+            +
Sbjct: 92  P-TASHGVTQFSDLTPAEFRKQVLGLR----------RLRLPKDANEA----------PI 130

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVD 350
               DLPE FDWR +G +  +K QG C  CW+FSA G +E  H +    L  LS QQLVD
Sbjct: 131 LPTSDLPEDFDWRDKGAVGPIKNQGSCGSCWSFSATGALEGAHFLATGELVSLSEQQLVD 190

Query: 351 CDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGF 401
           CD           + GCNGG M+ A +Y +  GG++ ++ YPY    ++R     ++   
Sbjct: 191 CDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG--TDRDACKFDKNKV 248

Query: 402 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQRL------ 452
             +V  +S +   +E+++   +   GPL+V +NA  +  Y GGV      ++RL      
Sbjct: 249 AARVANFSVVSL-DEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVLL 307

Query: 453 --YGTS---------IPYWIVKNSWGSDWGE 472
             YG++          P+WI+KNSWG  WGE
Sbjct: 308 VGYGSAGYSPVRMKEKPFWIIKNSWGEKWGE 338



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 17/166 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M+ A +Y +  GG++ ++ YPY    +
Sbjct: 179 ELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG--T 236

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +R     ++     +V  +S +   +E+++   +   GPL+V +NA  +  Y GGV    
Sbjct: 237 DRDACKFDKNKVAARVANFSVVSL-DEDQIAANLVKNGPLAVAINAVFMQTYIGGVS--C 293

Query: 608 QRLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ +  +H +++VGYG            P+WI+KNSWG  WGE
Sbjct: 294 PYICS-RRLDHGVLLVGYGSAGYSPVRMKEKPFWIIKNSWGEKWGE 338



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 22/163 (13%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           L++    F  F     K Y S E+   R   F  N+ +A  +Q  D  TA   V +F DL
Sbjct: 46  LSAEQHHFSLFKSKFKKSYGSQEEHDYRFSVFKANLRRAARHQELDP-TASHGVTQFSDL 104

Query: 98  SDSDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           + ++  +Q+ GL            L+ P  +N+            +    DLPE FDWR 
Sbjct: 105 TPAEFRKQVLGLR----------RLRLPKDANEA----------PILPTSDLPEDFDWRD 144

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +G +  +K QG C  CW+FSA G +E  H +    L  LS Q 
Sbjct: 145 KGAVGPIKNQGSCGSCWSFSATGALEGAHFLATGELVSLSEQQ 187


>gi|386648112|gb|AFJ15103.1| mexicain-like cystein protease, partial [Jacaratia mexicana]
          Length = 348

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 147/284 (51%), Gaps = 31/284 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           HD+VY+++E+ + R E F  N+    D  ++ + +   G+N+F DL+  + ++    ++ 
Sbjct: 55  HDRVYNNIEEKIHRFEIFKDNLMYI-DETNKKNNSYWLGLNEFVDLTHDEFKEKYVGSIG 113

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                I+ S    F                 +H  D PE+ DWR +G ++ VK    C  
Sbjct: 114 EDFVTIEQSNDEEFP---------------YKHVVDYPESIDWRDKGAVTPVKPN-PCGS 157

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFS V  VE ++ I    L  LS Q+L+DCD  + GC GG    +LQY++DN GV ++
Sbjct: 158 CWAFSTVATVEGINKIVTGKLISLSEQELLDCDRRSHGCKGGYQTTSLQYVVDN-GVHTE 216

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
           + YPY+  + +  C   E++G KV++  Y R+P  +E  + + +A + P+SV + + G  
Sbjct: 217 KEYPYEKKQGK--CRAKEKKGTKVQITGYKRVPANDEISLIQAIANQ-PVSVLLESKGRA 273

Query: 440 Y--YSGGV--------IDLNQRLYGTSIPYWIVKNSWGSDWGEK 473
           +  Y GG+        +D      G    Y ++KNSWG +WGEK
Sbjct: 274 FQLYKGGIFNGPCGTKLDHAVTAIGYGKTYILIKNSWGPNWGEK 317



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 96/168 (57%), Gaps = 19/168 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  ++  KL  L+ ++L+DCD  + GC GG    +LQY++DN GV +++ YPY+  + + 
Sbjct: 170 INKIVTGKLISLSEQELLDCDRRSHGCKGGYQTTSLQYVVDN-GVHTEKEYPYEKKQGK- 227

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLN 607
            C   E++G KV++  Y R+P  +E  + + +A + P+SV + + G  +  Y GG+ +  
Sbjct: 228 -CRAKEKKGTKVQITGYKRVPANDEISLIQAIANQ-PVSVLLESKGRAFQLYKGGIFN-- 283

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
              C  K  +HA+  +GYG+          Y ++KNSWG +WGEK  L
Sbjct: 284 -GPCGTKL-DHAVTAIGYGK---------TYILIKNSWGPNWGEKGYL 320



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 24/192 (12%)

Query: 14  LGYLHTFMIKVALLESNIFQTRGYLNSPVTR-------FLNFMRDHDKVYSSVEDLLRRH 66
           L ++ T +I    L S  F   GY    +T        F ++M  HD+VY+++E+ + R 
Sbjct: 10  LIFVATCLIVHVGLSSADFSIVGYSQDDLTSTERLIRLFESWMLKHDRVYNNIEEKIHRF 69

Query: 67  ENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFS 126
           E F  N+   ++  ++++ +    +N+F DL+  + ++    ++      I+ S    F 
Sbjct: 70  EIFKDNLMYIDETNKKNN-SYWLGLNEFVDLTHDEFKEKYVGSIGEDFVTIEQSNDEEFP 128

Query: 127 SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHA 186
                           +H  D PE+ DWR +G ++ VK    C  CWAFS V  VE ++ 
Sbjct: 129 ---------------YKHVVDYPESIDWRDKGAVTPVKPN-PCGSCWAFSTVATVEGINK 172

Query: 187 IQGNNLTELSVQ 198
           I    L  LS Q
Sbjct: 173 IVTGKLISLSEQ 184


>gi|427778331|gb|JAA54617.1| Putative cysteine proteinase cathepsin f [Rhipicephalus pulchellus]
          Length = 361

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 166/355 (46%), Gaps = 68/355 (19%)

Query: 188 QGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSE 247
           Q  +L  +  + ++K Y   E+   R   F  N+++   +   + GTA +G+ +F DLS 
Sbjct: 29  QERSLFSVFARTYNKTYKDKEEHEARFMIFKNNLKRIALFNRLEEGTAHYGLTEFSDLSP 88

Query: 248 SDLQQ-LTGL--NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 304
           S+ ++   GL  +L     +++P    P +                   + LP+ FDWR 
Sbjct: 89  SEFERHYLGLKKDLAEHKAEVKPIKVGPVN-------------------EPLPDLFDWRT 129

Query: 305 EGVISKVKEQGKC-AC-----------------CWAFSAVGVVEAMHAIQGNSLTELSVQ 346
           +G +++VK QG C +C                 CWAFS  G VE    +  + L  LS Q
Sbjct: 130 KGAVTEVKNQGMCGSCWAFSXXTEVKNQGMCGSCWAFSVTGNVEGQWFLSRSKLLSLSEQ 189

Query: 347 QLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           +LVDCD  + GC GG M  A++ +I+ GG+ ++  YPYK  +    C   + E  K +V+
Sbjct: 190 ELVDCDHGDHGCKGGYMGQAMKAVIEMGGLETESEYPYKGVDGT--CEFNKTES-KARVQ 246

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV------------IDLNQRLYG 454
            +  +P   E E+  W+   GP+S+G+NAN + +Y GG+            +D    L G
Sbjct: 247 SFVGLPQ-NETELAYWLMKHGPVSIGINANAMQFYFGGISHPWKFLCSPTDLDHGVLLVG 305

Query: 455 ----------TSIPYWIVKNSWGSDWGEKVEDKV--GSSGNRTRDLELTGVLPSK 497
                       +PYWIVKNSWG  WGEK   +V  G        + L+ V+P K
Sbjct: 306 FGVDKRSFRRKPVPYWIVKNSWGKYWGEKGYYRVYRGDGTCGVNQMALSAVVPPK 360



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 92/150 (61%), Gaps = 5/150 (3%)

Query: 504 EKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKV 563
           ++LVDCD  + GC GG M  A++ +I+ GG+ ++  YPYK  +    C   + E  K +V
Sbjct: 189 QELVDCDHGDHGCKGGYMGQAMKAVIEMGGLETESEYPYKGVDGT--CEFNKTES-KARV 245

Query: 564 KEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIV 623
           + +  +P   E E+  W+   GP+S+G+NAN + +Y GG+    + LC+P   +H +++V
Sbjct: 246 QSFVGLPQ-NETELAYWLMKHGPVSIGINANAMQFYFGGISHPWKFLCSPTDLDHGVLLV 304

Query: 624 GYGEEEKK-DGTSIPYWIVKNSWGSDWGEK 652
           G+G +++      +PYWIVKNSWG  WGEK
Sbjct: 305 GFGVDKRSFRRKPVPYWIVKNSWGKYWGEK 334



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 22/135 (16%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R ++K Y   E+   R   F  N+++   + R + GTA + + +F DLS S+ ++
Sbjct: 34  FSVFARTYNKTYKDKEEHEARFMIFKNNLKRIALFNRLEEGTAHYGLTEFSDLSPSEFER 93

Query: 105 -LTGL--NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
              GL  +L     +++P    P +                   + LP+ FDWR +G ++
Sbjct: 94  HYLGLKKDLAEHKAEVKPIKVGPVN-------------------EPLPDLFDWRTKGAVT 134

Query: 162 KVKEQGKCACCWAFS 176
           +VK QG C  CWAFS
Sbjct: 135 EVKNQGMCGSCWAFS 149


>gi|22653679|sp|Q26636.1|CATL_SARPE RecName: Full=Cathepsin L; Contains: RecName: Full=Cathepsin L
           heavy chain; Contains: RecName: Full=Cathepsin L light
           chain; Flags: Precursor
 gi|505140|dbj|BAA03970.1| cathepsin L precursor [Sarcophaga peregrina]
          Length = 339

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 121/224 (54%), Gaps = 30/224 (13%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           +P++ DWR  G ++ VK+QG C  CWAFS+ G +E  H  +   L  LS Q LVDC    
Sbjct: 122 VPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKY 181

Query: 355 -NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYS 409
            N GCNGG MD+A +YI DNGG+ ++++YPY+  +      +  +   + GF        
Sbjct: 182 GNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTGF-------V 234

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDL----NQRL--------YGT 455
            IP G+EE+MKK VAT GP+SV ++A+      YS GV +      Q L        YGT
Sbjct: 235 DIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGT 294

Query: 456 ---SIPYWIVKNSWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS 496
               + YW+VKNSWG+ WGE+   K+  + N    +      P+
Sbjct: 295 DESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGIATASSYPT 338



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 98/163 (60%), Gaps = 21/163 (12%)

Query: 498 LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RGC 551
           L  L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+  +      +  
Sbjct: 166 LVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKAT 225

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQR 609
           +   + GF         IP G+EE+MKK VAT GP+SV ++A+      YS GV   N+ 
Sbjct: 226 IGATDTGF-------VDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGV--YNEP 276

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C+ +  +H +++VGYG +E    + + YW+VKNSWG+ WGE+
Sbjct: 277 ECDEQNLDHGVLVVGYGTDE----SGMDYWLVKNSWGTTWGEQ 315



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 31/51 (60%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +P++ DWR  G ++ VK+QG C  CWAFS+ G +E  H  +   L  LS Q
Sbjct: 122 VPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQ 172


>gi|110737404|dbj|BAF00646.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 345

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/279 (35%), Positives = 144/279 (51%), Gaps = 37/279 (13%)

Query: 213 RHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGLNLDSTLEDIQPS-LQ 270
           R + F  N++  E++  + + +   GVN+F D +  +   + TGL     L ++ PS + 
Sbjct: 59  RRDVFKKNLKFIENFNKKGNKSYKLGVNEFADWTNEEFLAIHTGLK---GLTEVSPSKVV 115

Query: 271 APFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVE 330
           A   S+QT               D + E+ DWRAEG ++ VK QG+C CCWAFSAV  VE
Sbjct: 116 AKTISSQT-----------WNVSDMVVESKDWRAEGAVTPVKYQGQCGCCWAFSAVAAVE 164

Query: 331 AMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 389
            +  I G +L  LS QQL+DCD   +  C+GG M DA  Y++ N G+ S+  Y Y+ S+ 
Sbjct: 165 GVAKIAGGNLVSLSEQQLLDCDREYDRDCDGGIMSDAFNYVVQNRGIASENDYSYQGSDG 224

Query: 390 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVID 447
             GC          ++  +  +P   E  + + V +R P+SV M+A  +G  +YSGGV D
Sbjct: 225 --GCRSNARPA--ARISGFQTVPSNNERALLEAV-SRQPVSVSMDATGDGFMHYSGGVYD 279

Query: 448 ------LNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
                  N  +    YGTS     YW+ KNSWG  W EK
Sbjct: 280 GPCGTSSNHAVTFVGYGTSQDGTKYWLAKNSWGETWEEK 318



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 20/160 (12%)

Query: 498 LSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           L  L+ ++L+DCD   +  C+GG M DA  Y++ N G+ S+  Y Y+ S+   GC     
Sbjct: 174 LVSLSEQQLLDCDREYDRDCDGGIMSDAFNYVVQNRGIASENDYSYQGSDG--GCRSNAR 231

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCNP- 613
                ++  +  +P   E  + + V +R P+SV M+A  +G  +YSGGV D       P 
Sbjct: 232 PA--ARISGFQTVPSNNERALLEAV-SRQPVSVSMDATGDGFMHYSGGVYD------GPC 282

Query: 614 -KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             + NHA+  VGYG  +  DGT   YW+ KNSWG  W EK
Sbjct: 283 GTSSNHAVTFVGYGTSQ--DGTK--YWLAKNSWGETWEEK 318



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 20/182 (10%)

Query: 20  FMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           F I  A   + IF+ +  ++        F R++      +E  +RR + F  N++  E++
Sbjct: 18  FRISQATSRTVIFREQSMVDKHEQWMARFSREYR---DELEKNMRR-DVFKKNLKFIENF 73

Query: 80  QREDSGTAVFEVNKFFDLSDSDLQQL-TGLNLDSTLEDIQPS-LQAPFSSNQTDTEMRAF 137
            ++ + +    VN+F D ++ +   + TGL     L ++ PS + A   S+QT       
Sbjct: 74  NKKGNKSYKLGVNEFADWTNEEFLAIHTGLK---GLTEVSPSKVVAKTISSQT------- 123

Query: 138 QFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSV 197
                   D + E+ DWRAEG ++ VK QG+C CCWAFSAV  VE +  I G NL  LS 
Sbjct: 124 ----WNVSDMVVESKDWRAEGAVTPVKYQGQCGCCWAFSAVAAVEGVAKIAGGNLVSLSE 179

Query: 198 QH 199
           Q 
Sbjct: 180 QQ 181


>gi|149510440|ref|XP_001518002.1| PREDICTED: cathepsin K-like [Ornithorhynchus anatinus]
          Length = 618

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 154/303 (50%), Gaps = 47/303 (15%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           EL  + H K Y+S ED   R   +  N++    +  E S     G++ F +L+ + L  +
Sbjct: 316 ELWKKTHQKQYNSKEDETSRRLVWEKNLQYISAHNLEFS----LGIHTF-ELAMNHLGDM 370

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
           T   +  T+      L+ P +  Q++  + +  +      +  P++ D+R +G ++ VK 
Sbjct: 371 TSEEVVRTMT----GLKVPPARTQSNDTLYSPDW-----AERAPDSIDYRKKGYVTPVKN 421

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN 373
           QG+C  CWAFS+VG +E     +   L +LS Q LVDC  SN GC GG M +A QY+ DN
Sbjct: 422 QGQCGSCWAFSSVGALEGQLKKKTGRLLDLSPQNLVDCVASNDGCGGGYMTNAFQYVHDN 481

Query: 374 GGVVSDQAYPYKASESERGCLVGEEE-------GFKVKVKEYSRIPYGEEEEMKKWVATR 426
            G+ S+ AYPY          VG++E       G   K + Y  +P G+E+ +K+ VA  
Sbjct: 482 RGIDSEDAYPY----------VGQDEPCRYSPTGKAAKCRGYREVPVGDEKALKRAVARV 531

Query: 427 GPLSVGMNA--NGLFYYSGGV--------IDLNQRL----YGT--SIPYWIVKNSWGSDW 470
           GP++V ++A  +   +YS GV         +LN  L    YG      +WI+KNSWG +W
Sbjct: 532 GPVAVAIDASLSSFQFYSKGVYFDENCNGANLNHALLAVGYGAQKGAKHWIIKNSWGEEW 591

Query: 471 GEK 473
           G K
Sbjct: 592 GNK 594



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 96/176 (54%), Gaps = 31/176 (17%)

Query: 490 LTGVLPSKLSRL---ATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASE 546
           L G L  K  RL   + + LVDC  SN GC GG M +A QY+ DN G+ S+ AYPY    
Sbjct: 437 LEGQLKKKTGRLLDLSPQNLVDCVASNDGCGGGYMTNAFQYVHDNRGIDSEDAYPY---- 492

Query: 547 SERGCLVGEEE-------GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLF 597
                 VG++E       G   K + Y  +P G+E+ +K+ VA  GP++V ++A  +   
Sbjct: 493 ------VGQDEPCRYSPTGKAAKCRGYREVPVGDEKALKRAVARVGPVAVAIDASLSSFQ 546

Query: 598 YYSGGV-IDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +YS GV  D N   CN    NHAL+ VGYG ++        +WI+KNSWG +WG K
Sbjct: 547 FYSKGVYFDEN---CNGANLNHALLAVGYGAQKGAK-----HWIIKNSWGEEWGNK 594



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 31/191 (16%)

Query: 13  GLGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTN 72
           G G L   +  V L  S     +  L         + + H K Y+S ED   R   +  N
Sbjct: 292 GFGALVLLLPSVTLAASASLDVQWEL---------WKKTHQKQYNSKEDETSRRLVWEKN 342

Query: 73  VEKAEDYQREDS-GTAVFEV--NKFFDLSDSDL-QQLTGLNLDSTLEDIQPSLQAPFSSN 128
           ++    +  E S G   FE+  N   D++  ++ + +TGL +         +L +P    
Sbjct: 343 LQYISAHNLEFSLGIHTFELAMNHLGDMTSEEVVRTMTGLKVPPARTQSNDTLYSP---- 398

Query: 129 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
             D   RA            P++ D+R +G ++ VK QG+C  CWAFS+VG +E     +
Sbjct: 399 --DWAERA------------PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKK 444

Query: 189 GNNLTELSVQH 199
              L +LS Q+
Sbjct: 445 TGRLLDLSPQN 455


>gi|302781881|ref|XP_002972714.1| hypothetical protein SELMODRAFT_98707 [Selaginella moellendorffii]
 gi|300159315|gb|EFJ25935.1| hypothetical protein SELMODRAFT_98707 [Selaginella moellendorffii]
          Length = 446

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 151/290 (52%), Gaps = 34/290 (11%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           RR E F  N    E++      +   G+N+F DL+  + +Q   L L   L D  P L+ 
Sbjct: 33  RRFETFKENFRYIEEHNRAGKHSYRLGLNQFSDLTSEEFRQRF-LGLRPDLID-SPVLKM 90

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
           P     +D E   FQ        DLP + DWR  G ++  K+QG C  CWAF+  G +E 
Sbjct: 91  P---RDSDIE-EGFQ------NVDLPASVDWRKHGAVTAPKDQGSCGGCWAFATTGAIEG 140

Query: 332 MHAIQGNSLTELSVQQLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 390
           ++ I    L  LS Q+L+DCD  ++ GC+GG M++A Q+I++NGG+ ++  YPY ASES 
Sbjct: 141 INQIVTGQLMSLSEQELIDCDKKADKGCDGGLMENAYQFIVENGGLDTETDYPYHASESH 200

Query: 391 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN--ANGLFYYSGGVI-- 446
             C + +     V +  Y  IP G+E+ + + VA + P+SV +   +    +Y+ GV   
Sbjct: 201 --CNMKKLNSRVVAIDGYEAIPDGDEQALLRAVAKQ-PVSVAIEGASKDFQHYASGVFTG 257

Query: 447 ----DLNQRL----YGT--SIPYWIVKNSWGSDWGE----KVEDKVGSSG 482
               ++N  +    YGT   + YWIVKNSW + WG+    K++   G  G
Sbjct: 258 HCGEEINHGVLIVGYGTEDGLDYWIVKNSWAATWGDGGFVKMQRNTGKRG 307



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 97/162 (59%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++  +L  L+ ++L+DCD  ++ GC+GG M++A Q+I++NGG+ ++  YPY ASES   C
Sbjct: 144 IVTGQLMSLSEQELIDCDKKADKGCDGGLMENAYQFIVENGGLDTETDYPYHASESH--C 201

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN--ANGLFYYSGGVIDLNQR 609
            + +     V +  Y  IP G+E+ + + VA + P+SV +   +    +Y+ GV   +  
Sbjct: 202 NMKKLNSRVVAIDGYEAIPDGDEQALLRAVAKQ-PVSVAIEGASKDFQHYASGVFTGH-- 258

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C  +  NH ++IVGYG E+  D     YWIVKNSW + WG+
Sbjct: 259 -CGEEI-NHGVLIVGYGTEDGLD-----YWIVKNSWAATWGD 293



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 12/135 (8%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           RR E F  N    E++ R    +    +N+F DL+  + +Q   L L   L D  P L+ 
Sbjct: 33  RRFETFKENFRYIEEHNRAGKHSYRLGLNQFSDLTSEEFRQRF-LGLRPDLID-SPVLKM 90

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
           P     +D E   FQ        DLP + DWR  G ++  K+QG C  CWAF+  G +E 
Sbjct: 91  P---RDSDIE-EGFQ------NVDLPASVDWRKHGAVTAPKDQGSCGGCWAFATTGAIEG 140

Query: 184 MHAIQGNNLTELSVQ 198
           ++ I    L  LS Q
Sbjct: 141 INQIVTGQLMSLSEQ 155


>gi|1730100|sp|P36400.2|LMCPB_LEIME RecName: Full=Cysteine proteinase B; Flags: Precursor
 gi|899313|emb|CAA90236.1| LmCPb2.8 [Leishmania mexicana]
          Length = 443

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E    + G+ L  LS QQLV CD  N GC+GG M  A  +++   NG + 
Sbjct: 150 CWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLH 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +       C    E     ++  +  I    E+ M  W+A  GP+++ ++A+
Sbjct: 210 TEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDAS 268

Query: 437 GLFYYSGGVIDL---NQRLYGT---------SIPYWIVKNSWGSDWGEK 473
               Y  GV+      Q  +G           +PYW++KNSWG DWGE+
Sbjct: 269 SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L  L+ ++LV CD  N GC+GG M  A  +++ N  G + ++ +YPY +       C  
Sbjct: 169 ELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  +  I    E+ M  W+A  GP+++ ++A+    Y  GV+      C  
Sbjct: 229 SSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
           K  NH +++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 284 KQLNHGVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAA 96

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              LN  +     +      +   + D                +P+A DWR +G ++ VK
Sbjct: 97  RY-LNGAAYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAVG +E    + G+ L  LS Q
Sbjct: 143 DQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQ 176


>gi|253796148|gb|ACT35690.1| cathepsin L-like cysteine proteinase [Ditylenchus destructor]
          Length = 376

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/237 (37%), Positives = 124/237 (52%), Gaps = 45/237 (18%)

Query: 272 PFSSNQTDTEMRAFQFNSLR---------HGDDLPEAFDWRAEGVISKVKEQGKCACCWA 322
           PFS  Q     R    + LR         H  ++PE+ DWR  G +++VK QG C  CWA
Sbjct: 126 PFSEYQKLNGYRRIYGDPLRRNSSRFLAPHNVEVPESMDWRDHGYVTEVKNQGMCGSCWA 185

Query: 323 FSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQ 380
           FSA G +E  H     +L  LS Q LVDC  +  N GCNGG MD A QYI +N G+ ++ 
Sbjct: 186 FSATGSLEGQHKRSKGTLVSLSEQNLVDCSAAYGNNGCNGGLMDFAFQYIKENHGIDTET 245

Query: 381 AYPYKASES----ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA- 435
           +YPYKA +     +R  +  ++ GF         +P G+E+++K  VAT+GP+SV ++A 
Sbjct: 246 SYPYKARQKKCHFQRSSVGADDTGFM-------DLPEGDEDQLKIAVATQGPISVAIDAG 298

Query: 436 --------NGLFY--------YSGGVIDLNQRLYGTSI---PYWIVKNSWGSDWGEK 473
                    G++Y           GV+ +    YGT      YWIVKNSWG+ WGE+
Sbjct: 299 HRSFQLYKTGVYYEKECSSEQLDHGVLVVG---YGTDPDHGDYWIVKNSWGTTWGEQ 352



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 21/163 (12%)

Query: 498 LSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES----ERGC 551
           L  L+ + LVDC  +  N GCNGG MD A QYI +N G+ ++ +YPYKA +     +R  
Sbjct: 203 LVSLSEQNLVDCSAAYGNNGCNGGLMDFAFQYIKENHGIDTETSYPYKARQKKCHFQRSS 262

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
           +  ++ GF         +P G+E+++K  VAT+GP+SV ++A    +  Y  GV    ++
Sbjct: 263 VGADDTGFM-------DLPEGDEDQLKIAVATQGPISVAIDAGHRSFQLYKTGV--YYEK 313

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C+ +  +H +++VGYG     D     YWIVKNSWG+ WGE+
Sbjct: 314 ECSSEQLDHGVLVVGYG----TDPDHGDYWIVKNSWGTTWGEQ 352



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 9/85 (10%)

Query: 124 PFSSNQTDTEMRAFQFNSLR---------HGDDLPEAFDWRAEGVISKVKEQGKCACCWA 174
           PFS  Q     R    + LR         H  ++PE+ DWR  G +++VK QG C  CWA
Sbjct: 126 PFSEYQKLNGYRRIYGDPLRRNSSRFLAPHNVEVPESMDWRDHGYVTEVKNQGMCGSCWA 185

Query: 175 FSAVGVVEAMHAIQGNNLTELSVQH 199
           FSA G +E  H      L  LS Q+
Sbjct: 186 FSATGSLEGQHKRSKGTLVSLSEQN 210


>gi|18420375|ref|NP_568052.1| cysteine proteinase RD19a [Arabidopsis thaliana]
 gi|1172872|sp|P43296.1|RD19A_ARATH RecName: Full=Cysteine proteinase RD19a; Short=RD19; Flags:
           Precursor
 gi|435618|dbj|BAA02373.1| thiol protease [Arabidopsis thaliana]
 gi|4539328|emb|CAB38829.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|7270892|emb|CAB80572.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|19310552|gb|AAL85009.1| putative cysteine proteinase RD19A [Arabidopsis thaliana]
 gi|22136868|gb|AAM91778.1| putative cysteine proteinase RD19A [Arabidopsis thaliana]
 gi|110740898|dbj|BAE98545.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|332661616|gb|AEE87016.1| cysteine proteinase RD19a [Arabidopsis thaliana]
          Length = 368

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 144/300 (48%), Gaps = 51/300 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           KVY+S E+   R   F  N+ +A  +Q  D  +A  GV +F DL+ S+ ++   L + S 
Sbjct: 60  KVYASNEEHDYRFSVFKANLRRARRHQKLDP-SATHGVTQFSDLTRSEFRK-KHLGVRSG 117

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            +  + + +AP    +                 +LPE FDWR  G ++ VK QG C  CW
Sbjct: 118 FKLPKDANKAPILPTE-----------------NLPEDFDWRDHGAVTPVKNQGSCGSCW 160

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDALQYIID 372
           +FSA G +E  + +    L  LS QQLVDCD           + GCNGG M+ A +Y + 
Sbjct: 161 SFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLK 220

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
            GG++ ++ YPY   + +   L  ++      V  +S I   +EE++   +   GPL+V 
Sbjct: 221 TGGLMKEEDYPYTGKDGKTCKL--DKSKIVASVSNFSVISI-DEEQIAANLVKNGPLAVA 277

Query: 433 MNANGLFYYSGGV---IDLNQRL--------YGTS---------IPYWIVKNSWGSDWGE 472
           +NA  +  Y GGV       +RL        YG +          PYWI+KNSWG  WGE
Sbjct: 278 INAGYMQTYIGGVSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGE 337



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 105/219 (47%), Gaps = 33/219 (15%)

Query: 447 DLNQRLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS-KLSRLAT 503
           D + R +G   P   VKN  S GS W          S + T  LE    L + KL  L+ 
Sbjct: 138 DFDWRDHGAVTP---VKNQGSCGSCW----------SFSATGALEGANFLATGKLVSLSE 184

Query: 504 EKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           ++LVDCD           + GCNGG M+ A +Y +  GG++ ++ YPY   + +   L  
Sbjct: 185 QQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKL-- 242

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           ++      V  +S I   +EE++   +   GPL+V +NA  +  Y GGV      +C  +
Sbjct: 243 DKSKIVASVSNFSVISI-DEEQIAANLVKNGPLAVAINAGYMQTYIGGVS--CPYICT-R 298

Query: 615 AQNHALIIVGYGEEEKKDG--TSIPYWIVKNSWGSDWGE 651
             NH +++VGYG            PYWI+KNSWG  WGE
Sbjct: 299 RLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGE 337



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 19/156 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F R   KVY+S E+   R   F  N+ +A  +Q+ D  +A   V +F DL+ S+ +
Sbjct: 50  HFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDP-SATHGVTQFSDLTRSEFR 108

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +   L + S  +  + + +AP    +                 +LPE FDWR  G ++ V
Sbjct: 109 K-KHLGVRSGFKLPKDANKAPILPTE-----------------NLPEDFDWRDHGAVTPV 150

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CW+FSA G +E  + +    L  LS Q 
Sbjct: 151 KNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQ 186


>gi|11464866|gb|AAG35358.1|AF314930_1 cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q   + P                        P A DWRA G ++ VK+QG+C
Sbjct: 101 GAAHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVTAVKDQGQC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFSA+G VE    + G+ LT LS Q LV CD ++ GC+GG M++A ++I+  +NG 
Sbjct: 145 GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY + E                +  +  +P  +E ++  W+A  GP++V ++A
Sbjct: 205 VYTEDSYPYASGEGISPPCTTSGHTVGATITGHVGLPQ-DEAQIAAWLAVNGPVAVAVDA 263

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y+GGV        +D    L G     ++PYWI+KNS  + WGE+   ++    N
Sbjct: 264 SSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSRTTQWGEEGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 88/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 167 LTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 227 GHTVGATITGHVGLPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMT----SCVSEQ 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D  ++PYWI+KNS  + WGE+
Sbjct: 282 LDHGVLLVGY-----NDSAAVPYWIIKNSRTTQWGEE 313



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 18/157 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
            ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  +
Sbjct: 35  TSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANP-HATFGVTPFSDLTREE 93

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +     N  +     Q   + P                        P A DWRA G ++
Sbjct: 94  FRSRYH-NGAAHFAAAQERARVPVKVEVVGA----------------PAAVDWRARGAVT 136

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 137 AVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 173


>gi|445927|prf||1910332A Cys endopeptidase
          Length = 362

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 33/290 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H  V  S+ +  +R   F  NV    +    D    +  +NKF D++  + +        
Sbjct: 46  HHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKL-KLNKFADMTNHEFR-------- 96

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           ST    + +    F  +Q  +    F +  +     +P + DWR +G ++ VK+QG+C  
Sbjct: 97  STYAGSKVNHHKMFRGSQHGS--GTFMYEKV---GSVPASVDWRKKGAVTDVKDQGQCGS 151

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS +  VE ++ I+ N L  LS Q+LVDCD   N GCNGG M+ A ++I   GG+ +
Sbjct: 152 CWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITT 211

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG- 437
           +  YPYKA E    C   +     V +  +  +P  +E  + K VA + P+SV ++A G 
Sbjct: 212 ESNYPYKAQEGT--CDESKVNDLAVSIDGHENVPVNDENALLKAVANQ-PVSVAIDAGGS 268

Query: 438 -LFYYSGGVI------DLNQRL----YGTSIP---YWIVKNSWGSDWGEK 473
              +YS GV       DLN  +    YGT++    YWIV+NSWG +WGE+
Sbjct: 269 DFQFYSEGVFTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQ 318



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 93/168 (55%), Gaps = 18/168 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +  +KL  L+ ++LVDCD   N GCNGG M+ A ++I   GG+ ++  YPYKA E  
Sbjct: 164 INQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGT 223

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI-- 604
             C   +     V +  +  +P  +E  + K VA + P+SV ++A G    +YS GV   
Sbjct: 224 --CDESKVNDLAVSIDGHENVPVNDENALLKAVANQ-PVSVAIDAGGSDFQFYSEGVFTG 280

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           D N  L      NH + IVGYG     DGT+  YWIV+NSWG +WGE+
Sbjct: 281 DCNTDL------NHGVAIVGYG--TTVDGTN--YWIVRNSWGPEWGEQ 318



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  S+ +  +R   F  NV    +  + D    + ++NKF D+++ + +      
Sbjct: 44  RSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKL-KLNKFADMTNHEFR------ 96

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             ST    + +    F  +Q  +    F +  +     +P + DWR +G ++ VK+QG+C
Sbjct: 97  --STYAGSKVNHHKMFRGSQHGS--GTFMYEKV---GSVPASVDWRKKGAVTDVKDQGQC 149

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS +  VE ++ I+ N L  LS Q
Sbjct: 150 GSCWAFSTIVAVEGINQIKTNKLVSLSEQ 178


>gi|238006338|gb|ACR34204.1| unknown [Zea mays]
          Length = 465

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 42/306 (13%)

Query: 188 QGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF--GVNKFFDL 245
           +   L EL +  H + Y+++ +  RR   F  N+ +  D  +E +    F  G+N+F DL
Sbjct: 47  EARTLYELWLAEHGRAYNALGERDRRFRVFWDNL-RFVDAHNERAAEHGFRLGMNQFADL 105

Query: 246 SESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG---DDLPEAFDW 302
           +  + +                 L A   +++        ++   RHG   ++LPE+ DW
Sbjct: 106 TNDEFRAAY--------------LGARIPASRRRGTAVGERY---RHGGGAEELPESVDW 148

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC--DMSNGGCNG 360
           R +G ++ VK QG+C  CWAFSAV  VE+++ I    +  LS Q+LV+C  D  N GCNG
Sbjct: 149 REKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNG 208

Query: 361 GRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMK 420
           G MD A  +II NGG+ ++  YPYKA + +  C +  E    V +  +  +P  +E+ ++
Sbjct: 209 GLMDAAFDFIIKNGGIDTEGDYPYKAVDGK--CDINRENAKVVSIDGFEDVPENDEKSLQ 266

Query: 421 KWVATRGPLSVGMNANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSW 466
           K VA + P+SV + A G  +  Y  GV       +L+  +    YGT     YWIV+NSW
Sbjct: 267 KAVAHQ-PVSVAIEAGGREFQLYKAGVFTGTCTTNLDHGVVAVGYGTENGKDYWIVRNSW 325

Query: 467 GSDWGE 472
           G+ WGE
Sbjct: 326 GAKWGE 331



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 38/266 (14%)

Query: 398 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV--GMNANGLFYYSGGVIDLNQ----R 451
           E GF++ + +++ +    +E    ++  R P S   G      + + GG  +L +    R
Sbjct: 92  EHGFRLGMNQFADLT--NDEFRAAYLGARIPASRRRGTAVGERYRHGGGAEELPESVDWR 149

Query: 452 LYGTSIPYWIVKNS--WGSDWGEKVEDKVGSSGNRTRDLELTGVLPSKLSRLATEKLVDC 509
             G   P   VKN    GS W       V S         +  ++  ++  L+ ++LV+C
Sbjct: 150 EKGAVAP---VKNQGQCGSCWAFSAVSSVES---------VNQIVTGEMVTLSEQELVEC 197

Query: 510 --DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 567
             D  N GCNGG MD A  +II NGG+ ++  YPYKA + +  C +  E    V +  + 
Sbjct: 198 STDGGNSGCNGGLMDAAFDFIIKNGGIDTEGDYPYKAVDGK--CDINRENAKVVSIDGFE 255

Query: 568 RIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPKAQNHALIIVGY 625
            +P  +E+ ++K VA + P+SV + A G  +  Y  GV       C     +H ++ VGY
Sbjct: 256 DVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYKAGVF---TGTCTTNL-DHGVVAVGY 310

Query: 626 GEEEKKDGTSIPYWIVKNSWGSDWGE 651
           G E  KD     YWIV+NSWG+ WGE
Sbjct: 311 GTENGKD-----YWIVRNSWGAKWGE 331



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 23/156 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEV--NKFFDLSDSDLQQL 105
           ++ +H + Y+++ +  RR   F  N+ +  D   E +    F +  N+F DL++ + +  
Sbjct: 55  WLAEHGRAYNALGERDRRFRVFWDNL-RFVDAHNERAAEHGFRLGMNQFADLTNDEFRAA 113

Query: 106 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG---DDLPEAFDWRAEGVISK 162
                          L A   +++        ++   RHG   ++LPE+ DWR +G ++ 
Sbjct: 114 Y--------------LGARIPASRRRGTAVGERY---RHGGGAEELPESVDWREKGAVAP 156

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG+C  CWAFSAV  VE+++ I    +  LS Q
Sbjct: 157 VKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQ 192


>gi|4757570|gb|AAD29084.1|AF082181_1 cysteine proteinase precursor [Solanum melongena]
          Length = 363

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 147/317 (46%), Gaps = 53/317 (16%)

Query: 185 HAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFD 244
           H +   +   L    + K+Y+S E+   R + F  N+ +A  +Q  D  TA  G+ +F D
Sbjct: 39  HMLNAEHHFSLFKSKYGKIYASQEEHDHRLKVFKANLRRARRHQLLDP-TAEHGITQFSD 97

Query: 245 LSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 304
           L+ S+ ++ T L L       +P L A              Q   +    DLPE FDWR 
Sbjct: 98  LTPSEFRR-TYLGLHKP----RPKLNA--------------QKAPILPTSDLPEDFDWRE 138

Query: 305 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SN 355
           +G ++ VK QG C  CW+FS  G VE  H +    L  LS QQLVDCD           +
Sbjct: 139 KGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHECDAEEKSECD 198

Query: 356 GGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGE 415
            GCNGG M  A +Y +  GG+  ++ YPY   +   G    ++      V  +S I   +
Sbjct: 199 AGCNGGLMTTAFEYTLKAGGLQREKDYPYTGRD---GKCHFDKSKIAASVANFSVIGL-D 254

Query: 416 EEEMKKWVATRGPLSVGMNANGLFYYSGGV----IDLNQRLYGTSI-------------- 457
           E+++   +   GPL+VG+NA  +  Y  GV    I   ++ +G  +              
Sbjct: 255 EDQIAANLVKHGPLAVGINAAWMQTYMRGVSCPLICFKRQDHGVLLVGYGSAGFAPIRLK 314

Query: 458 --PYWIVKNSWGSDWGE 472
             PYWI+KNSWG +WGE
Sbjct: 315 EKPYWIIKNSWGENWGE 331



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 87/172 (50%), Gaps = 30/172 (17%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M  A +Y +  GG+  ++ YPY   + 
Sbjct: 173 ELVSLSEQQLVDCDHECDAEEKSECDAGCNGGLMTTAFEYTLKAGGLQREKDYPYTGRD- 231

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    ++      V  +S I   +E+++   +   GPL+VG+NA  +  Y  GV   +
Sbjct: 232 --GKCHFDKSKIAASVANFSVIGL-DEDQIAANLVKHGPLAVGINAAWMQTYMRGV---S 285

Query: 608 QRLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
             L   K Q+H +++VGYG         +EK      PYWI+KNSWG +WGE
Sbjct: 286 CPLICFKRQDHGVLLVGYGSAGFAPIRLKEK------PYWIIKNSWGENWGE 331



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 72/155 (46%), Gaps = 20/155 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F   + K+Y+S E+   R + F  N+ +A  +Q  D  TA   + +F DL+ S+ +
Sbjct: 46  HFSLFKSKYGKIYASQEEHDHRLKVFKANLRRARRHQLLDP-TAEHGITQFSDLTPSEFR 104

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           + T L L       +P L A              Q   +    DLPE FDWR +G ++ V
Sbjct: 105 R-TYLGLHKP----RPKLNA--------------QKAPILPTSDLPEDFDWREKGAVTGV 145

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CW+FS  G VE  H +    L  LS Q
Sbjct: 146 KNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQ 180


>gi|225446583|ref|XP_002280204.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera]
          Length = 341

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 157/308 (50%), Gaps = 47/308 (15%)

Query: 191 NLTELSV--QHHD------KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKF 242
           NL E S+  +H D      + Y   ++  +R++ F  NV + E +      +    +N+F
Sbjct: 29  NLHEASMYERHEDWMVQYGREYKDADEKSKRYKIFKDNVARIESFNKAMDKSYKLSINEF 88

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
            DL+  + +                + +  F ++   TE  +F++ ++     +P   DW
Sbjct: 89  ADLTNEEFR----------------ASRNRFKAHICSTEATSFKYENVTA---VPSTVDW 129

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNG 360
           R +G ++ +K+QG+C  CWAFSAV  +E +  +    L  LS Q+LVDCD S  + GC+G
Sbjct: 130 RKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQGCSG 189

Query: 361 GRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMK 420
           G MDDA ++I  N G+ ++  YPY  ++    C   +      K+  Y  +P   E+ ++
Sbjct: 190 GLMDDAFKFIEQNHGLTTEANYPYAGTDGT--CNRKKAAHPAAKINGYEDVPANNEKALQ 247

Query: 421 KWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNS 465
           K VA + P++V ++A G    +YS GV       +L+  +    YGTS   + YW+VKNS
Sbjct: 248 KAVAHQ-PIAVAIDAGGSEFQFYSSGVFTGQCGTELDHGVSAVGYGTSDDGMKYWLVKNS 306

Query: 466 WGSDWGEK 473
           WG+ WGE+
Sbjct: 307 WGTGWGEE 314



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   KL  L+ ++LVDCD S  + GC+GG MDDA ++I  N G+ ++  YPY  ++ 
Sbjct: 159 ITQLSTGKLISLSEQELVDCDTSGEDQGCSGGLMDDAFKFIEQNHGLTTEANYPYAGTDG 218

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C   +      K+  Y  +P   E+ ++K VA + P++V ++A G    +YS GV  
Sbjct: 219 T--CNRKKAAHPAAKINGYEDVPANNEKALQKAVAHQ-PIAVAIDAGGSEFQFYSSGVFT 275

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H +  VGYG  +  DG  + YW+VKNSWG+ WGE+
Sbjct: 276 GQ---CGTEL-DHGVSAVGYGTSD--DG--MKYWLVKNSWGTGWGEE 314



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 19/166 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R  ++M  + + Y   ++  +R++ F  NV + E + +    +    +N+F DL++ + +
Sbjct: 38  RHEDWMVQYGREYKDADEKSKRYKIFKDNVARIESFNKAMDKSYKLSINEFADLTNEEFR 97

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                           + +  F ++   TE  +F++ ++     +P   DWR +G ++ +
Sbjct: 98  ----------------ASRNRFKAHICSTEATSFKYENVTA---VPSTVDWRKKGAVTPI 138

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVED 209
           K+QG+C  CWAFSAV  +E +  +    L  LS Q      +S ED
Sbjct: 139 KDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGED 184


>gi|332220183|ref|XP_003259237.1| PREDICTED: cathepsin S isoform 1 [Nomascus leucogenys]
          Length = 331

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 115/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 174

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 175 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           Y  E+ +K+ VA +GP+SVG++A+    F Y  GV        ++N  +    YG     
Sbjct: 232 YSREDVLKEAVANKGPVSVGVDASHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 291

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 292 EYWLVKNSWGRNFGEE 307



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 158 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 215

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PY  E+ +K+ VA +GP+SVG++A+    F Y  GV    +  C
Sbjct: 216 -DSKYRAATCSKYTELPYSREDVLKEAVANKGPVSVGVDASHPSFFLYRSGV--YYEPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 273 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGRNFGEE 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQ 165


>gi|343476708|emb|CCD12273.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 363

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 158/324 (48%), Gaps = 47/324 (14%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVTVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  P+A DWR +G ++ V+++  C   WAFSA+G +E    + G+ LT LS Q L+
Sbjct: 124 ----GKAPDAVDWRKKGAVTPVRDERLCDSSWAFSAIGNIEGQWKVAGHELTSLSEQMLL 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASE------SERGCLVGEEEGF 401
            CD    GC GG MD A Q+I+  + G V ++Q+YPY +++      ++ G +VG     
Sbjct: 180 SCDTREDGCGGGLMDRAFQWIVSSNKGNVFTEQSYPYASTDGDVPRCNKSGKVVG----- 234

Query: 402 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLY 453
             K+ +Y  +P  +E  + +W+A  GP+++ + A  L  Y+GGV        +D    L 
Sbjct: 235 -AKISDYVDLPQ-DENAIAEWLAKNGPVAIAVEATSLQRYTGGVLTSCISEQLDHGVLLV 292

Query: 454 G----TSIPYWIVKNSWGSDWGEK 473
           G    +  PYWI+KNSWG  WGE+
Sbjct: 293 GYDDTSKPPYWIIKNSWGKGWGEE 316



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 24/164 (14%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASE------SE 548
           +L+ L+ + L+ CD    GC GG MD A Q+I+  + G V ++Q+YPY +++      ++
Sbjct: 169 ELTSLSEQMLLSCDTREDGCGGGLMDRAFQWIVSSNKGNVFTEQSYPYASTDGDVPRCNK 228

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
            G +VG       K+ +Y  +P  +E  + +W+A  GP+++ + A  L  Y+GGV+    
Sbjct: 229 SGKVVG------AKISDYVDLPQ-DENAIAEWLAKNGPVAIAVEATSLQRYTGGVLTS-- 279

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  +H +++VGY +  K      PYWI+KNSWG  WGE+
Sbjct: 280 --CISEQLDHGVLLVGYDDTSKP-----PYWIIKNSWGKGWGEE 316



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                P+A DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVTVST-------------GKAPDAVDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +++  C   WAFSA+G +E    + G+ LT LS Q
Sbjct: 142 RDERLCDSSWAFSAIGNIEGQWKVAGHELTSLSEQ 176


>gi|340053963|emb|CCC48256.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 452

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 141/293 (48%), Gaps = 39/293 (13%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG-- 255
           Q + + Y +  +   R   F  N+ ++  Y + +   A FGV  F DL+  + +      
Sbjct: 39  QKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRTRYHNG 97

Query: 256 -LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
             + ++    ++  +Q P                        P A DWR +G ++ VK+Q
Sbjct: 98  ERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVTPVKDQ 137

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--D 372
           G C  CW+FSA+G +E   A  GN LT LS Q LV CD  + GC GG MD+A ++I+  +
Sbjct: 138 GSCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDSKDNGCGGGFMDNAFEWIVKEN 197

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           +G V ++++YPY +   E              +  +  IP+ +E+ + K++A  GP++V 
Sbjct: 198 SGKVYTEKSYPYVSGGGEEPPCKPRGHEVGATITGHVDIPH-DEDAIAKYLADNGPVAVA 256

Query: 433 MNANGLFYYSGGVID------LNQRLY------GTSIPYWIVKNSWGSDWGEK 473
           ++A     YSGGV+       LN  +        +  PYWI+KNSW S WGEK
Sbjct: 257 VDATTFMSYSGGVVTSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEK 309



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD  + GC GG MD+A ++I+  ++G V ++++YPY +   E       
Sbjct: 163 LTSLSEQMLVSCDSKDNGCGGGFMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPR 222

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  IP+ +E+ + K++A  GP++V ++A     YSGGV+      C  +A
Sbjct: 223 GHEVGATITGHVDIPH-DEDAIAKYLADNGPVAVAVDATTFMSYSGGVVTS----CTSEA 277

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NH +++VGY +  K      PYWI+KNSW S WGEK
Sbjct: 278 LNHGVLLVGYNDSSKP-----PYWIIKNSWSSSWGEK 309



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 24/157 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F + + + Y +  +   R   F  N+ ++  Y   +   A F V  F DL+  + + 
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRT 92

Query: 105 LTG---LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                  + ++    ++  +Q P                        P A DWR +G ++
Sbjct: 93  RYHNGERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWRRKGAVT 132

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CW+FSA+G +E   A  GN LT LS Q
Sbjct: 133 PVKDQGSCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQ 169


>gi|217323618|gb|ACK38176.1| midgut cysteine peptidase, partial [Sphenophorus levis]
          Length = 324

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 144/291 (49%), Gaps = 41/291 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H K Y +  +  +R   F  N+ K E + +E   G   +  G+NKF D++ ++ + +   
Sbjct: 33  HGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRAEFKAMLAT 92

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            + +     +PS+ A           + FQ   L  G  +PE+ DWR+  V++ +K+Q +
Sbjct: 93  QVKT-----KPSIVA----------TKTFQ---LADGVSVPESIDWRSRNVVTPIKDQAQ 134

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CW+F+ VG  E  +A+    LT  S QQLVDC    N GC+GG +DD   YI  N G
Sbjct: 135 CGSCWSFAVVGSTEGAYALSTGKLTRFSEQQLVDCTTDLNYGCDGGYLDDTFPYIQTN-G 193

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           +  +  YPY   +   G    +      KV  Y  +P   E+ + + V T GP+++ +NA
Sbjct: 194 LELESDYPYTGYD---GSCSYDSSKVVTKVSSYVSVP-ANEQALLEAVGTAGPVAIAINA 249

Query: 436 NGLFYYSGGVID--------LNQRLYGT------SIPYWIVKNSWGSDWGE 472
           + L +Y  G+ID        L+  +          + YW++KNSWG+DWGE
Sbjct: 250 DDLQFYFSGIIDDKYCDPEWLDHGVLAVGYNSENGLDYWLIKNSWGADWGE 300



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 13/156 (8%)

Query: 497 KLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           KL+R + ++LVDC    N GC+GG +DD   YI  NG +  +  YPY   +   G    +
Sbjct: 157 KLTRFSEQQLVDCTTDLNYGCDGGYLDDTFPYIQTNG-LELESDYPYTGYD---GSCSYD 212

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                 KV  Y  +P   E+ + + V T GP+++ +NA+ L +Y  G+ID   + C+P+ 
Sbjct: 213 SSKVVTKVSSYVSVP-ANEQALLEAVGTAGPVAIAINADDLQFYFSGIID--DKYCDPEW 269

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H ++ VGY  E   D     YW++KNSWG+DWGE
Sbjct: 270 LDHGVLAVGYNSENGLD-----YWLIKNSWGADWGE 300



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 21/160 (13%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFE--VNKFFDLSD 99
             F +F   H K Y +  +  +R   F  N+ K E +  E   G   +   +NKF D++ 
Sbjct: 24  VHFQSFKLKHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTR 83

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
           ++ + +    + +     +PS+ A           + FQ   L  G  +PE+ DWR+  V
Sbjct: 84  AEFKAMLATQVKT-----KPSIVA----------TKTFQ---LADGVSVPESIDWRSRNV 125

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++ +K+Q +C  CW+F+ VG  E  +A+    LT  S Q 
Sbjct: 126 VTPIKDQAQCGSCWSFAVVGSTEGAYALSTGKLTRFSEQQ 165


>gi|255540425|ref|XP_002511277.1| cysteine protease, putative [Ricinus communis]
 gi|46395620|sp|O65039.1|CYSEP_RICCO RecName: Full=Vignain; AltName: Full=Cysteine endopeptidase; Flags:
           Precursor
 gi|2944446|gb|AAC62396.1| cysteine endopeptidase precursor [Ricinus communis]
 gi|223550392|gb|EEF51879.1| cysteine protease, putative [Ricinus communis]
          Length = 360

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/196 (40%), Positives = 115/196 (58%), Gaps = 19/196 (9%)

Query: 294 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM 353
           D +P + DWR +G ++ VK+QG+C  CWAFS +  VE ++ I+ N L  LS Q+LVDCD 
Sbjct: 124 DTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDT 183

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG MD A ++I   GG+ ++  YPY+A +    C V +E    V +  +  +P
Sbjct: 184 DQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGT--CDVSKENAPAVSIDGHENVP 241

Query: 413 YGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTSI--- 457
             +E  + K VA + P+SV ++A G    +YS GV       +L+  +    YGT+I   
Sbjct: 242 ENDENALLKAVANQ-PVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGT 300

Query: 458 PYWIVKNSWGSDWGEK 473
            YW VKNSWG +WGEK
Sbjct: 301 KYWTVKNSWGPEWGEK 316



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 92/163 (56%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +  +KL  L+ ++LVDCD   N GCNGG MD A ++I   GG+ ++  YPY+A +    C
Sbjct: 165 IKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGT--C 222

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
            V +E    V +  +  +P  +E  + K VA + P+SV ++A G    +YS GV   +  
Sbjct: 223 DVSKENAPAVSIDGHENVPENDENALLKAVANQ-PVSVAIDAGGSDFQFYSEGVFTGS-- 279

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H + IVGYG     DGT   YW VKNSWG +WGEK
Sbjct: 280 -CGTEL-DHGVAIVGYG--TTIDGTK--YWTVKNSWGPEWGEK 316



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  S+ +  +R   F  N     +  + D    + ++NKF D+++ + +      
Sbjct: 42  RSHHTVSRSLHEKQKRFNVFKHNAMHVHNANKMDKPYKL-KLNKFADMTNHEFRNTYS-- 98

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             S ++  +     P  +         F +  +   D +P + DWR +G ++ VK+QG+C
Sbjct: 99  -GSKVKHHRMFRGGPRGNG-------TFMYEKV---DTVPASVDWRKKGAVTSVKDQGQC 147

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS +  VE ++ I+ N L  LS Q
Sbjct: 148 GSCWAFSTIVAVEGINQIKTNKLVSLSEQ 176


>gi|4581057|gb|AAD24589.1|AF139913_1 cysteine protease [Trypanosoma congolense]
          Length = 440

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 154/318 (48%), Gaps = 35/318 (11%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYKDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVNVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  P A DWR +G ++ VK+QG+C   WAFSA+G +E    I G+ LT LS Q LV
Sbjct: 124 ----GKAPPAIDWRKKGAVTPVKDQGQCHSSWAFSAIGNIEGQWKIAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD ++ GC GG  D A ++I+  + G V ++Q+YPY +            +    K+++
Sbjct: 180 SCDTNDFGCGGGFSDPAFKWIVSSNKGNVFTEQSYPYASGGGNVPTCDKSGKVVGAKIRD 239

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----T 455
              +P  +E  + +W+A +GP+++ ++A     Y+GGV        +D    L G    +
Sbjct: 240 RVDLPR-DENAIAEWLAKKGPVAIAVDATSFQSYTGGVLTSCISEHLDHGVLLVGYDDTS 298

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSWG  WGE+
Sbjct: 299 KPPYWIIKNSWGKGWGEE 316



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 88/158 (55%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVG 554
           +L+ L+ + LV CD ++ GC GG  D A ++I+  + G V ++Q+YPY +          
Sbjct: 169 ELTSLSEQMLVSCDTNDFGCGGGFSDPAFKWIVSSNKGNVFTEQSYPYASGGGNVPTCDK 228

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
             +    K+++   +P  +E  + +W+A +GP+++ ++A     Y+GGV+      C  +
Sbjct: 229 SGKVVGAKIRDRVDLPR-DENAIAEWLAKKGPVAIAVDATSFQSYTGGVLTS----CISE 283

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +H +++VGY +  K      PYWI+KNSWG  WGE+
Sbjct: 284 HLDHGVLLVGYDDTSKP-----PYWIIKNSWGKGWGEE 316



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                P A DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVNVST-------------GKAPPAIDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C   WAFSA+G +E    I G+ LT LS Q
Sbjct: 142 KDQGQCHSSWAFSAIGNIEGQWKIAGHELTSLSEQ 176


>gi|405971604|gb|EKC36431.1| Cathepsin L [Crassostrea gigas]
          Length = 384

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 152/307 (49%), Gaps = 46/307 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE---DSGTAVFGVNKFFDLSESDLQQLTGL 256
           HDK Y   E+  RR E F  NV + E +         +   GVN+F DL  ++     GL
Sbjct: 86  HDKSYEDHEEESRRFEIFRENVLRIEKHNKLFHLGKKSYYLGVNQFTDLEYAEFVNFNGL 145

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            + + L + + S  +  S+N                   +P++ DWR++G ++KVK QG 
Sbjct: 146 KM-TNLNNTKCS--SHLSANNIV----------------VPDSVDWRSKGYVTKVKNQGA 186

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C  CWAFSA G +E  +  +   L  LS  QLVDC  S  N GCNGG M++A +Y+   G
Sbjct: 187 CGSCWAFSATGSLEGQYFRKNGKLVPLSESQLVDCSGSFGNEGCNGGFMENAFKYVKSVG 246

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ S+  YPYKA   +R C   ++      V     +  G E  +K+ V+  GP+SV ++
Sbjct: 247 GIESESDYPYKA--RQRTCAF-DKTKVIATVSGCVDVESGSESSLKEVVSEVGPVSVAID 303

Query: 435 A--NGLFYYSGGVID--------LNQRL----YGTSIP---YWIVKNSWGSDWGEKVEDK 477
           A  +    Y+GGV D        LN  +    YGTS+    YWIVKNSWG  WG  VE  
Sbjct: 304 AGHSSFQLYAGGVYDEPLCSTSRLNHGVLCVGYGTSLQGKDYWIVKNSWGVRWG--VEGY 361

Query: 478 VGSSGNR 484
           +  S N+
Sbjct: 362 IKMSRNK 368



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 88/159 (55%), Gaps = 15/159 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+  +LVDC  S  N GCNGG M++A +Y+   GG+ S+  YPYKA   +R C   
Sbjct: 209 KLVPLSESQLVDCSGSFGNEGCNGGFMENAFKYVKSVGGIESESDYPYKA--RQRTCAF- 265

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
           ++      V     +  G E  +K+ V+  GP+SV ++A  +    Y+GGV D  + LC+
Sbjct: 266 DKTKVIATVSGCVDVESGSESSLKEVVSEVGPVSVAIDAGHSSFQLYAGGVYD--EPLCS 323

Query: 613 PKAQNHALIIVGYGEE-EKKDGTSIPYWIVKNSWGSDWG 650
               NH ++ VGYG   + KD     YWIVKNSWG  WG
Sbjct: 324 TSRLNHGVLCVGYGTSLQGKD-----YWIVKNSWGVRWG 357



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 22/152 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE---DSGTAVFEVNKFFDLSDSDLQQ 104
           F   HDK Y   E+  RR E F  NV + E + +       +    VN+F DL  ++   
Sbjct: 82  FKILHDKSYEDHEEESRRFEIFRENVLRIEKHNKLFHLGKKSYYLGVNQFTDLEYAEFVN 141

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
             GL + + L + + S  +  S+N                   +P++ DWR++G ++KVK
Sbjct: 142 FNGLKM-TNLNNTKCS--SHLSANNIV----------------VPDSVDWRSKGYVTKVK 182

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELS 196
            QG C  CWAFSA G +E  +  +   L  LS
Sbjct: 183 NQGACGSCWAFSATGSLEGQYFRKNGKLVPLS 214


>gi|4469153|emb|CAB38314.1| chymopapain isoform II [Carica papaya]
          Length = 352

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 150/288 (52%), Gaps = 34/288 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H+K+Y S+++ + R E F  N+   ++   +++ +   G+N F DLS  + ++     + 
Sbjct: 55  HNKIYESIDEKIYRFEIFRDNLMYIDETNKKNN-SYWLGLNGFADLSNDEFKKKY---VG 110

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
              ED             T  E    +  + +H  + P++ DWRA+G ++ VK QG C  
Sbjct: 111 FVAEDF------------TGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGS 158

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFS +  VE ++ I   +L ELS Q+LVDCD  + GC GG    +LQY+ +N GV + 
Sbjct: 159 CWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANN-GVHTS 217

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
           + YPY+A + +  C   ++ G KVK+  Y R+P   E      +A + PLS  + A G  
Sbjct: 218 KVYPYQAKQYK--CRATDKPGPKVKITGYKRVPSNCETSFLGALANQ-PLSFLVEAGGKP 274

Query: 440 Y--YSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           +  Y  GV D      L+  +    YGTS    Y I+KNSWG +WGEK
Sbjct: 275 FQLYKSGVFDGPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEK 322



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           ++   L  L+ ++LVDCD  + GC GG    +LQY+ +N GV + + YPY+A + +  C 
Sbjct: 174 IVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANN-GVHTSKVYPYQAKQYK--CR 230

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRL 610
             ++ G KVK+  Y R+P   E      +A + PLS  + A G  +  Y  GV D     
Sbjct: 231 ATDKPGPKVKITGYKRVPSNCETSFLGALANQ-PLSFLVEAGGKPFQLYKSGVFD---GP 286

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           C  K  +HA+  VGYG  + K+     Y I+KNSWG +WGEK
Sbjct: 287 CGTKL-DHAVTAVGYGTSDGKN-----YIIIKNSWGPNWGEK 322



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 23/190 (12%)

Query: 16  YLHTFMIKVALLESNIFQTRGYLNSPVTR-------FLNFMRDHDKVYSSVEDLLRRHEN 68
           +L T +I    L S  F T GY    +T        F ++M  H+K+Y S+++ + R E 
Sbjct: 12  FLATCLIIHMGLSSADFYTVGYSQDDLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEI 71

Query: 69  FVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSN 128
           F  N+   ++  ++++ +    +N F DLS+ + ++     +    ED            
Sbjct: 72  FRDNLMYIDETNKKNN-SYWLGLNGFADLSNDEFKKKY---VGFVAEDF----------- 116

Query: 129 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
            T  E    +  + +H  + P++ DWRA+G ++ VK QG C  CWAFS +  VE ++ I 
Sbjct: 117 -TGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIV 175

Query: 189 GNNLTELSVQ 198
             NL ELS Q
Sbjct: 176 TGNLLELSEQ 185


>gi|21218381|gb|AAM44058.1|AF510740_1 cathepsin L1 [Schistosoma japonicum]
          Length = 317

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 135/281 (48%), Gaps = 44/281 (15%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           +R   F +N+ KA+ YQ  + G+AV+GV  + DL+  +  +                L A
Sbjct: 38  KRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTTDEFSR--------------THLTA 83

Query: 272 PF--SSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 329
           P+  SS +     R       R   D+P  FDWR +G +++VK QG C  CWAFS  G +
Sbjct: 84  PWRASSKRNTIPPR-------REVGDIPNNFDWREKGAVTEVKNQGMCGSCWAFSTTGNI 136

Query: 330 EAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 389
           E+    +   L  LS QQLVDCD  + GCNGG   +A + II  GG++ +  YPY A   
Sbjct: 137 ESQWFRKTGKLLSLSEQQLVDCDSLDDGCNGGLPSNAYESIIRMGGLMLEDNYPYDAKNE 196

Query: 390 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---- 445
           +    VG    +       ++    +E E+  W+     +SVGMNA  L +Y  G+    
Sbjct: 197 KCHLKVGNVAAYINSSVNLTQ----DESELAIWLYHHSAISVGMNALLLQFYRHGISHPW 252

Query: 446 --------IDLNQRLYGTSI-----PYWIVKNSWGSDWGEK 473
                   +D    L G  +     P+WIVKNSWG +WGEK
Sbjct: 253 WIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGEK 293



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 8/156 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GCNGG   +A + II  GG++ +  YPY A   +    VG  
Sbjct: 146 KLLSLSEQQLVDCDSLDDGCNGGLPSNAYESIIRMGGLMLEDNYPYDAKNEKCHLKVGNV 205

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
             +       ++    +E E+  W+     +SVGMNA  L +Y  G+       C+    
Sbjct: 206 AAYINSSVNLTQ----DESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWIFCSKYLL 261

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +HA+++VGYG  EK +    P+WIVKNSWG +WGEK
Sbjct: 262 DHAVLLVGYGVSEKNE----PFWIVKNSWGVEWGEK 293



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 23/138 (16%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           +R   F +N+ KA+ YQ  + G+AV+ V  + DL+  +  +                L A
Sbjct: 38  KRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTTDEFSR--------------THLTA 83

Query: 124 PF--SSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 181
           P+  SS +     R       R   D+P  FDWR +G +++VK QG C  CWAFS  G +
Sbjct: 84  PWRASSKRNTIPPR-------REVGDIPNNFDWREKGAVTEVKNQGMCGSCWAFSTTGNI 136

Query: 182 EAMHAIQGNNLTELSVQH 199
           E+    +   L  LS Q 
Sbjct: 137 ESQWFRKTGKLLSLSEQQ 154


>gi|66377984|gb|AAY45869.1| cathepsin L-like cysteine proteinase [Globodera pallida]
          Length = 379

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/198 (43%), Positives = 113/198 (57%), Gaps = 21/198 (10%)

Query: 295 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS 354
           DLPE+ DWR +G +++VK QG C  CWAFS+ G +EA HA Q   L  LS Q L+DC   
Sbjct: 160 DLPESVDWRDKGWVTEVKNQGMCGSCWAFSSTGALEAQHARQTGQLISLSEQNLIDCSKK 219

Query: 355 NG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
            G  GCNGG MD+A QYI DN GV  +  YPYKA   ++ CL    +        +  I 
Sbjct: 220 YGNMGCNGGIMDNAFQYIKDNNGVDKELDYPYKAKTGKK-CLFKRNDVGATDTGFFD-IA 277

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVI--------DLNQRL----YGTSIP 458
            G+EE++K  VAT+GP SV ++A    +  Y+ GV         +L+  +    YGT   
Sbjct: 278 EGDEEKLKIAVATQGPASVAIDAGHRSFQLYTHGVYFEKECSPENLDHGVLVVGYGTDAQ 337

Query: 459 ---YWIVKNSWGSDWGEK 473
              YWIVKNSWG+ WGE+
Sbjct: 338 QGDYWIVKNSWGAHWGEQ 355



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 19/173 (10%)

Query: 491 TGVLPSKLSR-------LATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYP 541
           TG L ++ +R       L+ + L+DC    G  GCNGG MD+A QYI DN GV  +  YP
Sbjct: 191 TGALEAQHARQTGQLISLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNNGVDKELDYP 250

Query: 542 YKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--Y 599
           YKA   ++ CL    +        +  I  G+EE++K  VAT+GP SV ++A    +  Y
Sbjct: 251 YKAKTGKK-CLFKRNDVGATDTGFFD-IAEGDEEKLKIAVATQGPASVAIDAGHRSFQLY 308

Query: 600 SGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           + GV    ++ C+P+  +H +++VGYG     D     YWIVKNSWG+ WGE+
Sbjct: 309 THGV--YFEKECSPENLDHGVLVVGYG----TDAQQGDYWIVKNSWGAHWGEQ 355



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 43/166 (25%)

Query: 147 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSS 206
           DLPE+ DWR +G +++VK QG C  CWAFS+ G +EA HA Q   L  LS Q       +
Sbjct: 160 DLPESVDWRDKGWVTEVKNQGMCGSCWAFSSTGALEAQHARQTGQLISLSEQ-------N 212

Query: 207 VEDLLRRHENFVTN----------------VEKAED--YQSEDSGTAVFGVNK------- 241
           + D  +++ N   N                V+K  D  Y+++     +F  N        
Sbjct: 213 LIDCSKKYGNMGCNGGIMDNAFQYIKDNNGVDKELDYPYKAKTGKKCLFKRNDVGATDTG 272

Query: 242 FFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF 287
           FFD++E D ++L           I  + Q P +S   D   R+FQ 
Sbjct: 273 FFDIAEGDEEKLK----------IAVATQGP-ASVAIDAGHRSFQL 307


>gi|334265690|ref|YP_004376219.1| cathepsin [Clostera anachoreta granulovirus]
 gi|315451014|gb|ADU24593.1| cathepsin [Clostera anachoreta granulovirus]
 gi|327553705|gb|AEB00299.1| cathepsin [Clostera anachoreta granulovirus]
          Length = 332

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 166/328 (50%), Gaps = 38/328 (11%)

Query: 178 VGVVEAMHAIQGN-----NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS 232
           V V   +H+++ N      L E  V + +K YSS ++ L R+E F  N+    +   E S
Sbjct: 9   VLVCGVVHSLKYNLDNSETLFEEFVTNFNKTYSSQDEKLIRYEIFKKNLALINNKNME-S 67

Query: 233 GTAVFGVNKFFDLSESDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLR 291
             A F +N + DL ++DL  + TGL +       +  L    +  +   ++   + ++L 
Sbjct: 68  KHATFDINIYSDLHKNDLLHRTTGLRIGLK----KNPLFKAITFRECGVQVIGDEPHAL- 122

Query: 292 HGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC 351
               LPE FDWR    ++ VK+Q +C  CWAFSA+G +E++H I+     +LS Q LV+C
Sbjct: 123 ----LPETFDWRLRNGVTSVKDQLQCGACWAFSALGNIESLHKIKYGVELDLSEQHLVNC 178

Query: 352 DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI 411
           D  N GC+GG M  AL+ I+  GG+V+++  PY   ++     V + +     +   +R 
Sbjct: 179 DPLNNGCDGGLMHWALENILYEGGLVAERDEPYFGYDA-----VCKPKRLSSTISGCTRF 233

Query: 412 PYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID-------LNQRL----YGT--SIP 458
               E  +++ +   GP+SV ++   +  Y  G+ D       LN  +    YG    +P
Sbjct: 234 VLQNENRLRELLVVNGPVSVAIDVIDVIDYKEGIADMCHNKNGLNHAVLLVGYGVDNDVP 293

Query: 459 YWIVKNSWGSDWGE----KVEDKVGSSG 482
           YWI+KNSWG +WGE    +V+  V S G
Sbjct: 294 YWILKNSWGENWGENGFFRVQRNVNSCG 321



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 13/151 (8%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ + LV+CD  N GC+GG M  AL+ I+  GG+V+++  PY   ++     V + +   
Sbjct: 170 LSEQHLVNCDPLNNGCDGGLMHWALENILYEGGLVAERDEPYFGYDA-----VCKPKRLS 224

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
             +   +R     E  +++ +   GP+SV ++   +  Y  G+ D+     N    NHA+
Sbjct: 225 STISGCTRFVLQNENRLRELLVVNGPVSVAIDVIDVIDYKEGIADMCH---NKNGLNHAV 281

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           ++VGYG +       +PYWI+KNSWG +WGE
Sbjct: 282 LLVGYGVD-----NDVPYWILKNSWGENWGE 307



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 12/182 (6%)

Query: 20  FMIKVALLESNIFQTRGY-LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAED 78
            ++ V +L   +  +  Y L++  T F  F+ + +K YSS ++ L R+E F  N+    +
Sbjct: 3   LIMPVIVLVCGVVHSLKYNLDNSETLFEEFVTNFNKTYSSQDEKLIRYEIFKKNLALINN 62

Query: 79  YQREDSGTAVFEVNKFFDLSDSDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAF 137
              E S  A F++N + DL  +DL  + TGL +       +  L    +  +   ++   
Sbjct: 63  KNME-SKHATFDINIYSDLHKNDLLHRTTGLRIGLK----KNPLFKAITFRECGVQVIGD 117

Query: 138 QFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSV 197
           + ++L     LPE FDWR    ++ VK+Q +C  CWAFSA+G +E++H I+     +LS 
Sbjct: 118 EPHAL-----LPETFDWRLRNGVTSVKDQLQCGACWAFSALGNIESLHKIKYGVELDLSE 172

Query: 198 QH 199
           QH
Sbjct: 173 QH 174


>gi|357438145|ref|XP_003589348.1| Cysteine proteinase [Medicago truncatula]
 gi|355478396|gb|AES59599.1| Cysteine proteinase [Medicago truncatula]
          Length = 364

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 155/318 (48%), Gaps = 63/318 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R   F +N+ KA+ +Q  D  +A  G+ KF DL+
Sbjct: 45  LNAEHHFTSFKSKFSKNYATKEEHDYRFGVFKSNLIKAKLHQKLDP-SAQHGITKFSDLT 103

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
            S+ + Q  GLN           L+ P  + +            +   ++LPE FDWR +
Sbjct: 104 ASEFRRQFLGLN---------KRLRLPAHAQKA----------PILPTNNLPEDFDWREK 144

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNG 356
           G ++ VK+QG C  CWAFS  G +E  + +    LT LS QQLVDCD           + 
Sbjct: 145 GAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLTSLSEQQLVDCDHVCDPEERGSCDS 204

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M++A +YI+ +GGVVS++ Y Y   +   G    ++      V  +S +   +E
Sbjct: 205 GCNGGLMNNAFEYILQSGGVVSEKDYAYTGRD---GSCKFDKSKVVASVSNFSVVSL-DE 260

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV----IDLNQRL-YGTSI-------------- 457
           +++   +   GPL+V +NA  +  Y  GV    I    RL +G  +              
Sbjct: 261 DQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYICAKARLDHGVLLLGFGQGGYAPIRLK 320

Query: 458 --PYWIVKNSWGSDWGEK 473
             PYWI+KNSWG +WGE+
Sbjct: 321 EKPYWIIKNSWGQNWGEE 338



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 41/212 (19%)

Query: 469 DWGEK-----VEDKVGSSGN-----RTRDLELTGVLPS-KLSRLATEKLVDCDM------ 511
           DW EK     V+D+ GS G+      T  LE    L + KL+ L+ ++LVDCD       
Sbjct: 140 DWREKGAVTPVKDQ-GSCGSCWAFSTTGALEGANYLATGKLTSLSEQQLVDCDHVCDPEE 198

Query: 512 ---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 568
               + GCNGG M++A +YI+ +GGVVS++ Y Y   +   G    ++      V  +S 
Sbjct: 199 RGSCDSGCNGGLMNNAFEYILQSGGVVSEKDYAYTGRD---GSCKFDKSKVVASVSNFSV 255

Query: 569 IPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE- 627
           +   +E+++   +   GPL+V +NA  +  Y  GV      +C     +H ++++G+G+ 
Sbjct: 256 VSL-DEDQIAANLVKNGPLAVAINAAWMQTYMSGVS--CPYICAKARLDHGVLLLGFGQG 312

Query: 628 -------EEKKDGTSIPYWIVKNSWGSDWGEK 652
                  +EK      PYWI+KNSWG +WGE+
Sbjct: 313 GYAPIRLKEK------PYWIIKNSWGQNWGEE 338



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 21/157 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F +F     K Y++ E+   R   F +N+ KA+ +Q+ D  +A   + KF DL+ S+ +
Sbjct: 50  HFTSFKSKFSKNYATKEEHDYRFGVFKSNLIKAKLHQKLDP-SAQHGITKFSDLTASEFR 108

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  GLN           L+ P  + +            +   ++LPE FDWR +G ++ 
Sbjct: 109 RQFLGLN---------KRLRLPAHAQKA----------PILPTNNLPEDFDWREKGAVTP 149

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK+QG C  CWAFS  G +E  + +    LT LS Q 
Sbjct: 150 VKDQGSCGSCWAFSTTGALEGANYLATGKLTSLSEQQ 186


>gi|357437719|ref|XP_003589135.1| Cysteine proteinase [Medicago truncatula]
 gi|355478183|gb|AES59386.1| Cysteine proteinase [Medicago truncatula]
          Length = 457

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 150/292 (51%), Gaps = 37/292 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           H K Y+ + +  +R E F  N++  +++   +S T   G+ +F DL+  + + +  G  +
Sbjct: 62  HGKSYNGLGEKDKRFEIFKDNLKFIDEHNGLNS-TYRLGLTRFADLTNEEYRSKFLGTKI 120

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFN--SLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           D                N+   ++   + N  + R GD LPE+ DWR EG +  VK+Q  
Sbjct: 121 DP---------------NRRMKKLGGSKSNRYAPRVGDKLPESVDWRKEGAVVGVKDQAS 165

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFSA+  VE ++ I    L  LS Q+LVDCD S N GCNGG MD A ++II NGG
Sbjct: 166 CGSCWAFSAIAAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIISNGG 225

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + S+  YPYKA +    C    +    V + +Y  +P  +E  ++K VA + P++V +  
Sbjct: 226 IDSEDDYPYKAVDGR--CDQNRKNAKVVTIDDYEDVPAYDELALQKAVANQ-PIAVAVEG 282

Query: 436 NG----LFYY------SGGVID--LNQRLYGT--SIPYWIVKNSWGSDWGEK 473
            G    L+ Y       G  +D  +    YGT     YWIV+NSWG  WGE+
Sbjct: 283 GGREFQLYEYGVFTGRCGTALDHGVAAVGYGTENGKDYWIVRNSWGGSWGEQ 334



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 90/166 (54%), Gaps = 15/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD S N GCNGG MD A ++II NGG+ S+  YPYKA +  
Sbjct: 181 INKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIISNGGIDSEDDYPYKAVDGR 240

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V + +Y  +P  +E  ++K VA + P++V +   G  +  Y  GV   
Sbjct: 241 --CDQNRKNAKVVTIDDYEDVPAYDELALQKAVANQ-PIAVAVEGGGREFQLYEYGVF-- 295

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               C   A +H +  VGYG E  KD     YWIV+NSWG  WGE+
Sbjct: 296 -TGRCG-TALDHGVAAVGYGTENGKD-----YWIVRNSWGGSWGEQ 334



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 19/160 (11%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +T +  ++  H K Y+ + +  +R E F  N++  +++   +S T    + +F DL++ +
Sbjct: 52  LTMYEEWLVKHGKSYNGLGEKDKRFEIFKDNLKFIDEHNGLNS-TYRLGLTRFADLTNEE 110

Query: 102 LQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN--SLRHGDDLPEAFDWRAEG 158
            + +  G  +D                N+   ++   + N  + R GD LPE+ DWR EG
Sbjct: 111 YRSKFLGTKIDP---------------NRRMKKLGGSKSNRYAPRVGDKLPESVDWRKEG 155

Query: 159 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +  VK+Q  C  CWAFSA+  VE ++ I   +L  LS Q
Sbjct: 156 AVVGVKDQASCGSCWAFSAIAAVEGINKIVTGDLISLSEQ 195


>gi|66394764|gb|AAY46196.1| cathepsin L-like cysteine proteinase [Globodera pallida]
          Length = 379

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/198 (43%), Positives = 113/198 (57%), Gaps = 21/198 (10%)

Query: 295 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS 354
           DLPE+ DWR +G +++VK QG C  CWAFS+ G +EA HA Q   L  LS Q L+DC   
Sbjct: 160 DLPESVDWRDKGWVTEVKNQGMCGSCWAFSSTGALEAQHARQTGQLISLSEQNLIDCSKK 219

Query: 355 NG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
            G  GCNGG MD+A QYI DN GV  +  YPYKA   ++ CL    +        +  I 
Sbjct: 220 YGNMGCNGGIMDNAFQYIKDNNGVDKELDYPYKAKTGKK-CLFKRNDVGATDTGFFD-IA 277

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVI--------DLNQRL----YGTSIP 458
            G+EE++K  VAT+GP SV ++A    +  Y+ GV         +L+  +    YGT   
Sbjct: 278 EGDEEKLKIAVATQGPASVAIDAGHRSFQLYTHGVYFEKECSPENLDHGVLVVGYGTDAQ 337

Query: 459 ---YWIVKNSWGSDWGEK 473
              YWIVKNSWG+ WGE+
Sbjct: 338 QGDYWIVKNSWGAHWGEQ 355



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 19/173 (10%)

Query: 491 TGVLPSKLSR-------LATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYP 541
           TG L ++ +R       L+ + L+DC    G  GCNGG MD+A QYI DN GV  +  YP
Sbjct: 191 TGALEAQHARQTGQLISLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNNGVDKELDYP 250

Query: 542 YKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--Y 599
           YKA   ++ CL    +        +  I  G+EE++K  VAT+GP SV ++A    +  Y
Sbjct: 251 YKAKTGKK-CLFKRNDVGATDTGFFD-IAEGDEEKLKIAVATQGPASVAIDAGHRSFQLY 308

Query: 600 SGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           + GV    ++ C+P+  +H +++VGYG     D     YWIVKNSWG+ WGE+
Sbjct: 309 THGV--YFEKECSPENLDHGVLVVGYG----TDAQQGDYWIVKNSWGAHWGEQ 355



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 43/166 (25%)

Query: 147 DLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSS 206
           DLPE+ DWR +G +++VK QG C  CWAFS+ G +EA HA Q   L  LS Q       +
Sbjct: 160 DLPESVDWRDKGWVTEVKNQGMCGSCWAFSSTGALEAQHARQTGQLISLSEQ-------N 212

Query: 207 VEDLLRRHENFVTN----------------VEKAED--YQSEDSGTAVFGVNK------- 241
           + D  +++ N   N                V+K  D  Y+++     +F  N        
Sbjct: 213 LIDCSKKYGNMGCNGGIMDNAFQYIKDNNGVDKELDYPYKAKTGKKCLFKRNDVGATDTG 272

Query: 242 FFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF 287
           FFD++E D ++L           I  + Q P +S   D   R+FQ 
Sbjct: 273 FFDIAEGDEEKLK----------IAVATQGP-ASVAIDAGHRSFQL 307


>gi|116242316|gb|ABJ89815.1| putative cathepsin L preprotein [Clonorchis sinensis]
          Length = 371

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 148/305 (48%), Gaps = 44/305 (14%)

Query: 190 NNLTELSVQHHDKVYSSVEDLLRR----HENFVTNVEKAEDYQSEDSGTAVFGVNKFFDL 245
           N++ +  ++ + +VY S  +  RR     ENF+   E    ++  +   ++ G+N F D 
Sbjct: 64  NSMWQAFLEKYKRVYDSKLEEERRLGIFTENFIRISEHNLLFEKGEVSYSM-GINAFSDK 122

Query: 246 SESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
           + S+L  L G                  SS  + +  +   F++       P   DWR +
Sbjct: 123 TNSELDVLRGFR---------------HSSKASRSGSQYIPFDAAP-----PAEVDWRTK 162

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDD 365
           G ++ VK QG C  CWAFSA G +E  H +    L  LS QQLVDC  SN GC+GG MD 
Sbjct: 163 GAVTPVKNQGDCGSCWAFSATGGIEGQHYLATGKLVSLSEQQLVDCSSSNDGCDGGLMDL 222

Query: 366 ALQYIIDNGGVVSDQAYPYKASES--ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWV 423
           A +Y+ ++ G+ ++  YPY +  +   R C    +    V V  Y  IP G+E  +++ V
Sbjct: 223 AFEYVKEHKGIDTEVHYPYVSGNTGYARQCSFDPKYA-AVNVTGYVDIPEGQELLLQQAV 281

Query: 424 ATRGPLSVGMNAN--GLFYYSGGVI--------DLNQRL----YGT--SIPYWIVKNSWG 467
              GP+SVG+NA       Y  G+         DL+  +    YG    +PYW++KNSWG
Sbjct: 282 GFHGPISVGINAGLPSFMAYESGIYSDHRCNPHDLDHGVLVVGYGVDNGVPYWLIKNSWG 341

Query: 468 SDWGE 472
            DWGE
Sbjct: 342 EDWGE 346



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 12/159 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES--ERGCLVG 554
           KL  L+ ++LVDC  SN GC+GG MD A +Y+ ++ G+ ++  YPY +  +   R C   
Sbjct: 196 KLVSLSEQQLVDCSSSNDGCDGGLMDLAFEYVKEHKGIDTEVHYPYVSGNTGYARQCSFD 255

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCN 612
            +    V V  Y  IP G+E  +++ V   GP+SVG+NA       Y  G+   +   CN
Sbjct: 256 PKYA-AVNVTGYVDIPEGQELLLQQAVGFHGPISVGINAGLPSFMAYESGI--YSDHRCN 312

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           P   +H +++VGYG +       +PYW++KNSWG DWGE
Sbjct: 313 PHDLDHGVLVVGYGVD-----NGVPYWLIKNSWGEDWGE 346



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 25/156 (16%)

Query: 48  FMRDHDKVYSSVEDLLRR----HENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           F+  + +VY S  +  RR     ENF+   E    +++ +   ++  +N F D ++S+L 
Sbjct: 70  FLEKYKRVYDSKLEEERRLGIFTENFIRISEHNLLFEKGEVSYSM-GINAFSDKTNSELD 128

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            L G                  SS  + +  +   F++       P   DWR +G ++ V
Sbjct: 129 VLRGFR---------------HSSKASRSGSQYIPFDAAP-----PAEVDWRTKGAVTPV 168

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CWAFSA G +E  H +    L  LS Q 
Sbjct: 169 KNQGDCGSCWAFSATGGIEGQHYLATGKLVSLSEQQ 204


>gi|308474437|ref|XP_003099440.1| CRE-CPL-1 protein [Caenorhabditis remanei]
 gi|308266846|gb|EFP10799.1| CRE-CPL-1 protein [Caenorhabditis remanei]
          Length = 337

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/284 (35%), Positives = 144/284 (50%), Gaps = 48/284 (16%)

Query: 215 ENFVTNVEKAEDYQSEDS-GTAVF--GVNKFFDLSESDLQQLTG---LNLDSTLEDIQPS 268
           E FV NV   +++  +   G   F  G+N   DL  S  ++L G   L  DS +++   S
Sbjct: 53  EAFVKNVIHIDNHNRDHRLGRKTFEMGLNHIADLPFSQYRKLNGYRRLYGDSRIKN-SSS 111

Query: 269 LQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGV 328
             APF+                     +P+  DWR   +++ VK QG C  CWAFSA G 
Sbjct: 112 FLAPFNVQ-------------------VPDEVDWRDTHLVTDVKNQGMCGSCWAFSATGA 152

Query: 329 VEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKA 386
           +E  HA +   L  LS Q LVDC     N GCNGG MD A +YI DN GV ++ +YPYK 
Sbjct: 153 LEGQHARKLGKLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHGVDTEDSYPYKG 212

Query: 387 SESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA---------NG 437
            + +  C   +++      K Y+ +P G+EE++K  VAT+GP+S+ ++A          G
Sbjct: 213 RDMK--CHFSKKD-VGADDKGYTDLPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKG 269

Query: 438 LFY---YSGGVIDLNQRL--YGTSIP---YWIVKNSWGSDWGEK 473
           ++Y    S   +D    L  YGT      YW+VKNSWG+ WGEK
Sbjct: 270 VYYDEECSSEELDHGVLLVGYGTDPEHGDYWLVKNSWGTGWGEK 313



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 93/160 (58%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD A +YI DN GV ++ +YPYK  + +  C   
Sbjct: 163 KLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHGVDTEDSYPYKGRDMK--CHFS 220

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
           +++      K Y+ +P G+EE++K  VAT+GP+S+ ++A    +  Y  GV       C+
Sbjct: 221 KKD-VGADDKGYTDLPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGV--YYDEECS 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +++VGYG     D     YW+VKNSWG+ WGEK
Sbjct: 278 SEELDHGVLLVGYG----TDPEHGDYWLVKNSWGTGWGEK 313



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 27/167 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS-GTAVFE--VNKF 94
           + + + ++ ++  D++K Y+  ++ +   E FV NV   +++ R+   G   FE  +N  
Sbjct: 25  IEAAIEKWDDYKEDYEKDYTGDDEQVYM-EAFVKNVIHIDNHNRDHRLGRKTFEMGLNHI 83

Query: 95  FDLSDSDLQQLTG---LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEA 151
            DL  S  ++L G   L  DS +++   S  APF+                     +P+ 
Sbjct: 84  ADLPFSQYRKLNGYRRLYGDSRIKN-SSSFLAPFNVQ-------------------VPDE 123

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            DWR   +++ VK QG C  CWAFSA G +E  HA +   L  LS Q
Sbjct: 124 VDWRDTHLVTDVKNQGMCGSCWAFSATGALEGQHARKLGKLVSLSEQ 170


>gi|391336140|ref|XP_003742440.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 144/295 (48%), Gaps = 44/295 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF--GVNKFFDLSESDLQQ-LTGL 256
           H K Y   ++ L R   F  N+   E++   ++  A F  GVN+F D++ ++    L GL
Sbjct: 35  HLKSYRDGQEELIRRFIFEDNLHTIEEFNRVNASLAGFTLGVNEFADMTNTEFSNMLLGL 94

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              + +        + F S+               H  DLP   DW  +G +++VK QG+
Sbjct: 95  GGRNKIAG-----DSVFESS---------------HVQDLPAEVDWTQKGYVTEVKNQGQ 134

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYIIDNG 374
           C  CWAFS  G +E     +   L  LS Q LVDC  S G  GCNGG MD A  YI  NG
Sbjct: 135 CGSCWAFSTTGSLEGQVFKKTGKLVSLSEQNLVDCSTSEGNQGCNGGLMDQAFTYIKKNG 194

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ ++ AYPY  S+     L   E      V  +  +  G+E  +K+ VAT GP+SV ++
Sbjct: 195 GIDTEAAYPYTGSDGTCRFL---ENKVGATVSGFVDVKSGDENALKEAVATVGPISVAID 251

Query: 435 ANGLF--YYSGGV--------IDLNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           A+ +F  +Y GGV         +L+  +    YGT     YW+VKNSWGS WG K
Sbjct: 252 ASSIFFQFYRGGVYNPWFCSSTELDHGVLVVGYGTEGGKDYWLVKNSWGSSWGLK 306



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 91/160 (56%), Gaps = 14/160 (8%)

Query: 497 KLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC  S G  GCNGG MD A  YI  NGG+ ++ AYPY  S+     L  
Sbjct: 157 KLVSLSEQNLVDCSTSEGNQGCNGGLMDQAFTYIKKNGGIDTEAAYPYTGSDGTCRFL-- 214

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
            E      V  +  +  G+E  +K+ VAT GP+SV ++A+ +F  +Y GGV   N   C+
Sbjct: 215 -ENKVGATVSGFVDVKSGDENALKEAVATVGPISVAIDASSIFFQFYRGGV--YNPWFCS 271

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               +H +++VGYG E  KD     YW+VKNSWGS WG K
Sbjct: 272 STELDHGVLVVGYGTEGGKD-----YWLVKNSWGSSWGLK 306



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 23/155 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFE--VNKFFDLSDSDLQQ- 104
           F   H K Y   ++ L R   F  N+   E++ R ++  A F   VN+F D+++++    
Sbjct: 31  FKSTHLKSYRDGQEELIRRFIFEDNLHTIEEFNRVNASLAGFTLGVNEFADMTNTEFSNM 90

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           L GL   + +        + F S+               H  DLP   DW  +G +++VK
Sbjct: 91  LLGLGGRNKIAG-----DSVFESS---------------HVQDLPAEVDWTQKGYVTEVK 130

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG+C  CWAFS  G +E     +   L  LS Q+
Sbjct: 131 NQGQCGSCWAFSTTGSLEGQVFKKTGKLVSLSEQN 165


>gi|401430108|ref|XP_003879535.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|356491914|emb|CBZ40911.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 359

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 45/296 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG+C  
Sbjct: 103 AYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGECGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFS+VG +E    + G+ L  LS QQLV CD  N GC+GG M  A  +++   NG + 
Sbjct: 150 CWAFSSVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLY 209

Query: 378 SDQAYPY--------KASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           ++ +YPY        + S S +  +VG +    V +          E+ M  W+A  GP+
Sbjct: 210 TEDSYPYVSGNGYLPECSNSSK-LVVGAQIDGHVLIGS-------SEKAMAAWLAKNGPI 261

Query: 430 SVGMNANGLFYYSGGVI------DLNQRLYGTS------IPYWIVKNSWGSDWGEK 473
           ++ ++A+    Y  GV+       +N  +          +PYW++KNSWG DWGE+
Sbjct: 262 AIALDASSFMSYKSGVLTACIGKQVNHAVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 29/167 (17%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPY--------KASE 546
           +L  L+ ++LV CD  N GC+GG M  A  +++ N  G + ++ +YPY        + S 
Sbjct: 169 ELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYLPECSN 228

Query: 547 SERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDL 606
           S +  +VG +    V +          E+ M  W+A  GP+++ ++A+    Y  GV+  
Sbjct: 229 SSK-LVVGAQIDGHVLIGS-------SEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA 280

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
               C  K  NHA+++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 281 ----CIGKQVNHAVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAA 96

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              LN  +     +      +   + D                +P+A DWR +G ++ VK
Sbjct: 97  RY-LNGAAYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG+C  CWAFS+VG +E    + G+ L  LS Q
Sbjct: 143 DQGECGSCWAFSSVGNIEGQWYLAGHELVSLSEQ 176


>gi|401430288|ref|XP_003886537.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|356491333|emb|CBZ40988.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 533

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 135 YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAARY-LNGA 192

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 193 AYFAAAKRHAAQHYRKARADL-------------SAVPDAVDWREKGAVTPVKDQGACGS 239

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E    + G+ L  LS QQLV CD  N GC+GG M  A  +++   NG + 
Sbjct: 240 CWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLH 299

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +       C    E     ++  +  I    E+ M  W+A  GP+++ ++A+
Sbjct: 300 TEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDAS 358

Query: 437 GLFYYSGGVIDL---NQRLYGT---------SIPYWIVKNSWGSDWGEK 473
               Y  GV+      Q  +G           +PYW++KNSWG DWGE+
Sbjct: 359 SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 407



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L  L+ ++LV CD  N GC+GG M  A  +++ N  G + ++ +YPY +       C  
Sbjct: 259 ELVSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSN 318

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  +  I    E+ M  W+A  GP+++ ++A+    Y  GV+      C  
Sbjct: 319 SSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA----CIG 373

Query: 614 KAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
           K  NH +++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 374 KQLNHGVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 407



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 128 FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAA 186

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              LN  +     +      +   + D                +P+A DWR +G ++ VK
Sbjct: 187 RY-LNGAAYFAAAKRHAAQHYRKARADL-------------SAVPDAVDWREKGAVTPVK 232

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAVG +E    + G+ L  LS Q
Sbjct: 233 DQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQ 266


>gi|254674508|dbj|BAH86062.1| cysteine protease [Haemaphysalis longicornis]
          Length = 333

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 147/298 (49%), Gaps = 46/298 (15%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV---FGVNKFFDLSESDLQQLTG 255
            H+K YSS  + L R + F  N      + ++ +   V     +NKF DL   +  ++  
Sbjct: 33  QHNKAYSSHVEELLRFKIFTENTLLVAKHNAKYAKGLVSYKLAMNKFGDLLPHEFAKMVN 92

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
                  ++ +P+   P + N +                 LP   DWR +G ++ VK QG
Sbjct: 93  GYRGKQNKEQRPTFIPPANLNDSS----------------LPTTVDWRKKGAVTPVKNQG 136

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC--DMSNGGCNGGRMDDALQYIIDN 373
           +C  CWAFS  G +E  H  +   L  LS Q LVDC  D  N GCNGG MD+  QYI  N
Sbjct: 137 QCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSDDFGNQGCNGGLMDNGFQYIKAN 196

Query: 374 GGVVSDQAYPYKASESE---RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           GG+ +++++PY A + +   +   VG  +   V +++      G E+++KK VAT GP+S
Sbjct: 197 GGIDTEESHPYTAQDGDCKFKKADVGATDAGFVDIQQ------GSEDDLKKAVATVGPVS 250

Query: 431 VGMNA-NGLF-YYSGGVID--------LNQRL----YGTS--IPYWIVKNSWGSDWGE 472
           V ++A +G F  YS GV D        L+  +    YG      YW+VKNSWG DWG+
Sbjct: 251 VAIDASHGSFQLYSQGVYDEPDCSSSQLDHGVLTVGYGVKNGKKYWLVKNSWGGDWGD 308



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 96/162 (59%), Gaps = 20/162 (12%)

Query: 497 KLSRLATEKLVDC--DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE---RGC 551
           KL  L+ + LVDC  D  N GCNGG MD+  QYI  NGG+ +++++PY A + +   +  
Sbjct: 160 KLVSLSEQNLVDCSDDFGNQGCNGGLMDNGFQYIKANGGIDTEESHPYTAQDGDCKFKKA 219

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA-NGLF-YYSGGVIDLNQR 609
            VG  +   V +++      G E+++KK VAT GP+SV ++A +G F  YS GV D  + 
Sbjct: 220 DVGATDAGFVDIQQ------GSEDDLKKAVATVGPVSVAIDASHGSFQLYSQGVYD--EP 271

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C+    +H ++ VGYG +  K      YW+VKNSWG DWG+
Sbjct: 272 DCSSSQLDHGVLTVGYGVKNGK-----KYWLVKNSWGGDWGD 308



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 19/160 (11%)

Query: 43  TRFLNFMRDHDKVYSS-VEDLLRRHENFVTNVEKAEDYQREDSGTAVFEV--NKFFDLSD 99
           T +  F   H+K YSS VE+LLR        +  A+   +   G   +++  NKF DL  
Sbjct: 25  TEWEAFKSQHNKAYSSHVEELLRFKIFTENTLLVAKHNAKYAKGLVSYKLAMNKFGDLLP 84

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
            +  ++         ++ +P+   P + N +                 LP   DWR +G 
Sbjct: 85  HEFAKMVNGYRGKQNKEQRPTFIPPANLNDSS----------------LPTTVDWRKKGA 128

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           ++ VK QG+C  CWAFS  G +E  H  +   L  LS Q+
Sbjct: 129 VTPVKNQGQCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQN 168


>gi|405971603|gb|EKC36430.1| Cathepsin L [Crassostrea gigas]
          Length = 360

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 146/295 (49%), Gaps = 44/295 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE---DSGTAVFGVNKFFDLSESDLQQLTGL 256
           HDK Y ++E+  RR E F  NV+K E++         +   GVN+F DL   +  +  GL
Sbjct: 63  HDKTYDALEEESRRFEIFRENVQKIEEHNKLYHLGKKSYYLGVNQFSDLKHEEFVKYNGL 122

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              S  +    S  A                N+L      P++ DWR +G ++ VK QG+
Sbjct: 123 KKTSLKDGGCSSYLAA---------------NNLVE----PDSVDWRKKGYVTDVKNQGQ 163

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C  CW+FS  G +E  H  +   L  LS  QLVDC  S  N GCNGG MD+A +YI   G
Sbjct: 164 CGSCWSFSTTGSLEGQHFRKSGKLVSLSESQLVDCSQSFGNEGCNGGLMDNAFKYIKSVG 223

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ S++ YPYK    ++G    ++            +  G E  +KK V+  GP+SV ++
Sbjct: 224 GLESEEDYPYKP---KQGTCKFDDTKVAATDTGCVDVESGSESALKKAVSEVGPVSVAID 280

Query: 435 ANGLFY--YSGGVID----LNQRL--------YGT---SIPYWIVKNSWGSDWGE 472
           A+   +  Y+GGV D     +++L        YGT      YWIVKNSWG++WGE
Sbjct: 281 ASHSSFQSYAGGVYDEPECSSEQLDHGVLCVGYGTDDQGQDYWIVKNSWGAEWGE 335



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 13/159 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+  +LVDC  S  N GCNGG MD+A +YI   GG+ S++ YPYK    ++G    
Sbjct: 186 KLVSLSESQLVDCSQSFGNEGCNGGLMDNAFKYIKSVGGLESEEDYPYKP---KQGTCKF 242

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
           ++            +  G E  +KK V+  GP+SV ++A+   +  Y+GGV D  +  C+
Sbjct: 243 DDTKVAATDTGCVDVESGSESALKKAVSEVGPVSVAIDASHSSFQSYAGGVYD--EPECS 300

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +  +H ++ VGYG +++       YWIVKNSWG++WGE
Sbjct: 301 SEQLDHGVLCVGYGTDDQGQ----DYWIVKNSWGAEWGE 335



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 22/148 (14%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQRE---DSGTAVFEVNKFFDLSDSDLQQLTGL 108
           HDK Y ++E+  RR E F  NV+K E++ +       +    VN+F DL   +  +  GL
Sbjct: 63  HDKTYDALEEESRRFEIFRENVQKIEEHNKLYHLGKKSYYLGVNQFSDLKHEEFVKYNGL 122

Query: 109 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 168
              S  +    S  A                N+L      P++ DWR +G ++ VK QG+
Sbjct: 123 KKTSLKDGGCSSYLAA---------------NNLVE----PDSVDWRKKGYVTDVKNQGQ 163

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELS 196
           C  CW+FS  G +E  H  +   L  LS
Sbjct: 164 CGSCWSFSTTGSLEGQHFRKSGKLVSLS 191


>gi|320543907|ref|NP_001188921.1| cysteine proteinase-1, isoform D [Drosophila melanogaster]
 gi|318068589|gb|ADV37168.1| cysteine proteinase-1, isoform D [Drosophila melanogaster]
          Length = 249

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 120/218 (55%), Gaps = 31/218 (14%)

Query: 279 DTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGN 338
           D   +   F S  H   LP++ DWR +G ++ VK+QG C  CWAFS+ G +E  H  +  
Sbjct: 16  DESFKGVTFISPAH-VTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSG 74

Query: 339 SLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RG 392
            L  LS Q LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +      +G
Sbjct: 75  VLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKG 134

Query: 393 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGV----- 445
            +   + GF       + IP G+E++M + VAT GP+SV ++A+     +YS GV     
Sbjct: 135 TVGATDRGF-------TDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQ 187

Query: 446 IDLNQRLYGTSI----------PYWIVKNSWGSDWGEK 473
            D     +G  +           YW+VKNSWG+ WG+K
Sbjct: 188 CDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDK 225



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 101/166 (60%), Gaps = 21/166 (12%)

Query: 498 LSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE----RGC 551
           L  L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +      +G 
Sbjct: 76  LVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGT 135

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQR 609
           +   + GF       + IP G+E++M + VAT GP+SV ++A+     +YS GV   N+ 
Sbjct: 136 VGATDRGF-------TDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGV--YNEP 186

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
            C+ +  +H +++VG+G +E  +     YW+VKNSWG+ WG+K  +
Sbjct: 187 QCDAQNLDHGVLVVGFGTDESGE----DYWLVKNSWGTTWGDKGFI 228



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 131 DTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGN 190
           D   +   F S  H   LP++ DWR +G ++ VK+QG C  CWAFS+ G +E  H  +  
Sbjct: 16  DESFKGVTFISPAH-VTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSG 74

Query: 191 NLTELSVQH 199
            L  LS Q+
Sbjct: 75  VLVSLSEQN 83


>gi|535454|gb|AAA50755.1| cysteine proteinase [Alnus glutinosa]
          Length = 340

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 39/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + +VY  + +  +R++ F  NV   E    + +      VN+F DL+  + +        
Sbjct: 45  YGRVYKDINEKQKRYKIFEENVALIESSNKDANKPYKLSVNQFADLTNEEFK-------- 96

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                   + +  F  +   T+  +F++ ++     +P A DWR +G ++ VK+QG+C C
Sbjct: 97  --------ASRNRFKGHICSTKSTSFKYGNV---SAVPSAMDWRMKGAVTPVKDQGQCGC 145

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVV 377
           CWAFSAV   E +  +    L  LS Q+LVDCD S  + GC GG MD+A  +I  N G+ 
Sbjct: 146 CWAFSAVAATEGITKLTTGELISLSEQELVDCDTSGVDQGCEGGLMDNAFTFIQHNHGLA 205

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA-- 435
           S+  YPYK  +    C   ++     ++  +  +P   EE +   VA + P+SV ++A  
Sbjct: 206 SEANYPYKGVDGT--CNTNKQAIHAAEINGFEDVPANSEEALLNAVAHQ-PVSVAIDAGG 262

Query: 436 NGLFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
           +G  +YS GV        L+  +    YGTS     YW+VKNSWG+ WGE+
Sbjct: 263 SGFQFYSKGVFIGACGTQLDHGVTAVGYGTSDDGTKYWLVKNSWGTQWGEE 313



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 15/167 (8%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +T +   +L  L+ ++LVDCD S  + GC GG MD+A  +I  N G+ S+  YPYK  + 
Sbjct: 158 ITKLTTGELISLSEQELVDCDTSGVDQGCEGGLMDNAFTFIQHNHGLASEANYPYKGVDG 217

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVID 605
              C   ++     ++  +  +P   EE +   VA + P+SV ++A  +G  +YS GV  
Sbjct: 218 T--CNTNKQAIHAAEINGFEDVPANSEEALLNAVAHQ-PVSVAIDAGGSGFQFYSKGVF- 273

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                C  +  +H +  VGYG  +  DGT   YW+VKNSWG+ WGE+
Sbjct: 274 --IGACGTQL-DHGVTAVGYGTSD--DGT--KYWLVKNSWGTQWGEE 313



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 20/179 (11%)

Query: 21  MIKVALLESNIFQTRGYLNSPVT-RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY 79
           M+ +  L S +   R   ++ +  R   +M  + +VY  + +  +R++ F  NV   E  
Sbjct: 13  MVTLGALASQLAAARSLQDASMRERHEEWMASYGRVYKDINEKQKRYKIFEENVALIESS 72

Query: 80  QREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF 139
            ++ +      VN+F DL++ + +                + +  F  +   T+  +F++
Sbjct: 73  NKDANKPYKLSVNQFADLTNEEFK----------------ASRNRFKGHICSTKSTSFKY 116

Query: 140 NSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            ++     +P A DWR +G ++ VK+QG+C CCWAFSAV   E +  +    L  LS Q
Sbjct: 117 GNV---SAVPSAMDWRMKGAVTPVKDQGQCGCCWAFSAVAATEGITKLTTGELISLSEQ 172


>gi|256077195|ref|XP_002574893.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230782|emb|CCD77199.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 456

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 140/277 (50%), Gaps = 38/277 (13%)

Query: 213 RHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAP 272
           R   F +N+ KA+ YQ  + G+A++GV  + DL+  +  +            +  S   P
Sbjct: 176 RFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTTDEFAR----------THLTASWVVP 225

Query: 273 FSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAM 332
            S + T T +        +  +++P+ FDWR +G +++VK QG C  CWAFS  G VE+ 
Sbjct: 226 SSRSNTPTSLG-------KEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQ 278

Query: 333 HAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 392
              +   L  LS QQLVDCD  + GCNGG   +A + II  GG++ +  YPY A ++E+ 
Sbjct: 279 WFRKTGKLLSLSEQQLVDCDGLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDA-KNEKC 337

Query: 393 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV------- 445
            L  + +G  V +     +   +E E+  W+     +SVGMNA  L +Y  G+       
Sbjct: 338 HL--KTDGVAVYINSSVNLT-QDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIF 394

Query: 446 -----IDLNQRLYGTSI-----PYWIVKNSWGSDWGE 472
                +D    L G  +     P+WIVKNSWG +WGE
Sbjct: 395 CSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGE 431



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 8/155 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GCNGG   +A + II  GG++ +  YPY A ++E+  L  + 
Sbjct: 285 KLLSLSEQQLVDCDGLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDA-KNEKCHL--KT 341

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           +G  V +     +   +E E+  W+     +SVGMNA  L +Y  G+       C+    
Sbjct: 342 DGVAVYINSSVNLT-QDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLL 400

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +HA+++VGYG  EK +    P+WIVKNSWG +WGE
Sbjct: 401 DHAVLLVGYGVSEKNE----PFWIVKNSWGVEWGE 431



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 19/156 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +++ F   + K Y   +++  R   F +N+ KA+ YQ  + G+A++ V  + DL+  +  
Sbjct: 157 KYVQFKLKYRKQYHETDEI--RFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTTDEFA 214

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +            +  S   P S + T T +        +  +++P+ FDWR +G +++V
Sbjct: 215 R----------THLTASWVVPSSRSNTPTSLG-------KEVNNIPKNFDWREKGAVTEV 257

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CWAFS  G VE+    +   L  LS Q 
Sbjct: 258 KNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQ 293


>gi|226468424|emb|CAX69889.1| Temporarily Assigned Gene name [Schistosoma japonicum]
          Length = 454

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 40/279 (14%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           +R   F +N+ KA+ YQ  + G+AV+GV  + DL+  +  +                L A
Sbjct: 175 KRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTTDEFSR--------------THLTA 220

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
           P+ ++     +     +  R   D+P  FDWR +G +++VK QG C  CWAFS  G +E+
Sbjct: 221 PWRASSKRNTI-----SPRREVGDIPNNFDWRKKGAVTEVKNQGMCGSCWAFSTTGNIES 275

Query: 332 MHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 391
               +   L  LS QQLVDCD  + GCNGG   +A + II  GG++ +  YPY A   + 
Sbjct: 276 QWFRKTGKLLSLSEQQLVDCDNLDDGCNGGLPSNAYESIIRMGGLMLEDNYPYDAKNEKC 335

Query: 392 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV------ 445
              V     +       ++    +E E+  W+     +SVGMNA  L +Y  G+      
Sbjct: 336 HLKVANVAAYINSSVNLTQ----DESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWI 391

Query: 446 ------IDLNQRLYGTSI-----PYWIVKNSWGSDWGEK 473
                 +D    L G  +     P+WIVKNSWG +WGEK
Sbjct: 392 FCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGEK 430



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 8/156 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GCNGG   +A + II  GG++ +  YPY A   +    V   
Sbjct: 283 KLLSLSEQQLVDCDNLDDGCNGGLPSNAYESIIRMGGLMLEDNYPYDAKNEKCHLKVANV 342

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
             +       ++    +E E+  W+     +SVGMNA  L +Y  G+       C+    
Sbjct: 343 AAYINSSVNLTQ----DESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWIFCSKYLL 398

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +HA+++VGYG  EK +    P+WIVKNSWG +WGEK
Sbjct: 399 DHAVLLVGYGVSEKNE----PFWIVKNSWGVEWGEK 430



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 19/135 (14%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           +R   F +N+ KA+ YQ  + G+AV+ V  + DL+  +  +                L A
Sbjct: 175 KRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTTDEFSR--------------THLTA 220

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
           P+ ++     +     +  R   D+P  FDWR +G +++VK QG C  CWAFS  G +E+
Sbjct: 221 PWRASSKRNTI-----SPRREVGDIPNNFDWRKKGAVTEVKNQGMCGSCWAFSTTGNIES 275

Query: 184 MHAIQGNNLTELSVQ 198
               +   L  LS Q
Sbjct: 276 QWFRKTGKLLSLSEQ 290


>gi|457756|emb|CAA82995.1| cysteine proteinase [Vicia sativa]
          Length = 358

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 149/318 (46%), Gaps = 63/318 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R   F  N+ KA+ +Q  D  TA  G+ KF DL+
Sbjct: 37  LNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKANLIKAKLHQKLDP-TAEHGITKFSDLT 95

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
            S+ + Q  GLN           L+ P  + +            +    +LPE FDWR +
Sbjct: 96  ASEFRRQFLGLN---------KRLRLPAHAQKA----------PILPTTNLPEDFDWREK 136

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNG 356
           G ++ VK+QG C  CWAFS  G +E  H +    L  LS QQLVDCD           + 
Sbjct: 137 GAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEEAGSCDS 196

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M++A +Y++ +GGVV ++ Y Y   +   G    ++      V  +S +   +E
Sbjct: 197 GCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD---GSCKFDKSKVVASVSNFSVVSL-DE 252

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV----------IDLNQRLYG-----------T 455
           E++   +   GPL+V +NA  +  Y  GV          +D    L G            
Sbjct: 253 EQIAANLVKNGPLAVAINAAWMQAYMSGVSCPYVCAKARLDHGVLLVGFGKGAYAPIRLK 312

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSWG +WGE+
Sbjct: 313 EKPYWIIKNSWGQNWGEQ 330



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 41/212 (19%)

Query: 469 DWGEK-----VEDKVGSSGN-----RTRDLELTGVLPS-KLSRLATEKLVDCDM------ 511
           DW EK     V+D+ GS G+      T  LE    L + KL  L+ ++LVDCD       
Sbjct: 132 DWREKGAVTPVKDQ-GSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEE 190

Query: 512 ---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 568
               + GCNGG M++A +Y++ +GGVV ++ Y Y   +   G    ++      V  +S 
Sbjct: 191 AGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD---GSCKFDKSKVVASVSNFSV 247

Query: 569 IPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE- 627
           +   +EE++   +   GPL+V +NA  +  Y  GV      +C     +H +++VG+G+ 
Sbjct: 248 VSL-DEEQIAANLVKNGPLAVAINAAWMQAYMSGVS--CPYVCAKARLDHGVLLVGFGKG 304

Query: 628 -------EEKKDGTSIPYWIVKNSWGSDWGEK 652
                  +EK      PYWI+KNSWG +WGE+
Sbjct: 305 AYAPIRLKEK------PYWIIKNSWGQNWGEQ 330



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 21/156 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F +F     K Y++ E+   R   F  N+ KA+ +Q+ D  TA   + KF DL+ S+ +
Sbjct: 42  HFTSFKSKFSKSYATKEEHDYRFGVFKANLIKAKLHQKLDP-TAEHGITKFSDLTASEFR 100

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  GLN           L+ P  + +            +    +LPE FDWR +G ++ 
Sbjct: 101 RQFLGLN---------KRLRLPAHAQKA----------PILPTTNLPEDFDWREKGAVTP 141

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG C  CWAFS  G +E  H +    L  LS Q
Sbjct: 142 VKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQ 177


>gi|226501480|ref|NP_001150266.1| cysteine protease 1 precursor [Zea mays]
 gi|195637948|gb|ACG38442.1| cysteine protease 1 precursor [Zea mays]
          Length = 462

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 157/306 (51%), Gaps = 42/306 (13%)

Query: 188 QGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVF--GVNKFFDL 245
           +   L EL +  H + Y+++ +  RR   F  N+ +  D  +E +    F  G+N+F DL
Sbjct: 44  EARTLYELWLAEHGRAYNALGERDRRFRVFWDNL-RFVDAHNERAAEHGFRLGMNQFADL 102

Query: 246 SESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG---DDLPEAFDW 302
           +  + +                 L A   + +        ++   RHG   ++LPE+ DW
Sbjct: 103 TNDEFRAAY--------------LGARIPAARRRGTAVGERY---RHGGGAEELPESVDW 145

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC--DMSNGGCNG 360
           R +G ++ VK QG+C  CWAFSAV  VE+++ I    +  LS Q+LV+C  D  N GCNG
Sbjct: 146 REKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNG 205

Query: 361 GRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMK 420
           G MD A  +II NGG+ ++  YPYKA + +  C +  E    V +  +  +P  +E+ ++
Sbjct: 206 GLMDAAFDFIIKNGGIDTEGDYPYKAVDGK--CDINRENAKVVSIDGFEDVPENDEKSLQ 263

Query: 421 KWVATRGPLSVGMNANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSW 466
           K VA + P+SV + A G  +  Y  GV       +L+  +    YGT     YWIV+NSW
Sbjct: 264 KAVAHQ-PVSVAIEAGGREFQLYKAGVFSGTCTTNLDHGVVAVGYGTENGKDYWIVRNSW 322

Query: 467 GSDWGE 472
           G+ WGE
Sbjct: 323 GAKWGE 328



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 128/266 (48%), Gaps = 38/266 (14%)

Query: 398 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV--GMNANGLFYYSGGVIDLNQ----R 451
           E GF++ + +++ +    +E    ++  R P +   G      + + GG  +L +    R
Sbjct: 89  EHGFRLGMNQFADLT--NDEFRAAYLGARIPAARRRGTAVGERYRHGGGAEELPESVDWR 146

Query: 452 LYGTSIPYWIVKNS--WGSDWGEKVEDKVGSSGNRTRDLELTGVLPSKLSRLATEKLVDC 509
             G   P   VKN    GS W       V S         +  ++  ++  L+ ++LV+C
Sbjct: 147 EKGAVAP---VKNQGQCGSCWAFSAVSSVES---------VNQIVTGEMVTLSEQELVEC 194

Query: 510 --DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 567
             D  N GCNGG MD A  +II NGG+ ++  YPYKA + +  C +  E    V +  + 
Sbjct: 195 STDGGNSGCNGGLMDAAFDFIIKNGGIDTEGDYPYKAVDGK--CDINRENAKVVSIDGFE 252

Query: 568 RIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPKAQNHALIIVGY 625
            +P  +E+ ++K VA + P+SV + A G  +  Y  GV       C     +H ++ VGY
Sbjct: 253 DVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYKAGVF---SGTCTTN-LDHGVVAVGY 307

Query: 626 GEEEKKDGTSIPYWIVKNSWGSDWGE 651
           G E  KD     YWIV+NSWG+ WGE
Sbjct: 308 GTENGKD-----YWIVRNSWGAKWGE 328



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 23/156 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEV--NKFFDLSDSDLQQL 105
           ++ +H + Y+++ +  RR   F  N+ +  D   E +    F +  N+F DL++ + +  
Sbjct: 52  WLAEHGRAYNALGERDRRFRVFWDNL-RFVDAHNERAAEHGFRLGMNQFADLTNDEFRAA 110

Query: 106 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG---DDLPEAFDWRAEGVISK 162
                          L A   + +        ++   RHG   ++LPE+ DWR +G ++ 
Sbjct: 111 Y--------------LGARIPAARRRGTAVGERY---RHGGGAEELPESVDWREKGAVAP 153

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG+C  CWAFSAV  VE+++ I    +  LS Q
Sbjct: 154 VKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQ 189


>gi|355681664|gb|AER96818.1| cathepsin S [Mustela putorius furo]
          Length = 338

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/249 (36%), Positives = 136/249 (54%), Gaps = 32/249 (12%)

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
           +DL  + L  +T   + S +  ++   Q  + +N T      ++ NS      LP++ DW
Sbjct: 81  YDLGMNHLADMTSEEVSSLMSSLRVPSQ--WQANVT------YKSNS---NQKLPDSVDW 129

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---SNGGCN 359
           R +G +++VK QG C  CWAFSAVG +EA   ++  +L  LS Q LVDC      N GCN
Sbjct: 130 REKGCVTEVKYQGACGACWAFSAVGALEAQLKLKTGNLVSLSAQNLVDCSTERYGNKGCN 189

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG M  A QYIIDN G+ S+ +YPYKA +   G    + +       +Y+ +P+G E+ +
Sbjct: 190 GGFMTKAFQYIIDNNGIDSEVSYPYKAMD---GNCRYDSKHRAATCSKYTELPFGSEDAL 246

Query: 420 KKWVATRGPLSVGMNA--NGLFYYSGGVI-------DLNQRL----YG--TSIPYWIVKN 464
           K+ VA +GP+SV ++A  +  F Y  GV        ++N  +    YG      YW+VKN
Sbjct: 247 KEAVANKGPVSVAIDAKHSSFFLYKSGVYYDPSCTQNVNHGVLVVGYGNLNGRDYWLVKN 306

Query: 465 SWGSDWGEK 473
           SWG ++GE+
Sbjct: 307 SWGLNFGEQ 315



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 16/160 (10%)

Query: 498 LSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           L  L+ + LVDC      N GCNGG M  A QYIIDN G+ S+ +YPYKA +   G    
Sbjct: 167 LVSLSAQNLVDCSTERYGNKGCNGGFMTKAFQYIIDNNGIDSEVSYPYKAMD---GNCRY 223

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
           + +       +Y+ +P+G E+ +K+ VA +GP+SV ++A  +  F Y  GV       C 
Sbjct: 224 DSKHRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDAKHSSFFLYKSGV--YYDPSCT 281

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               NH +++VGYG    +D     YW+VKNSWG ++GE+
Sbjct: 282 QNV-NHGVLVVGYGNLNGRD-----YWLVKNSWGLNFGEQ 315



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 11/105 (10%)

Query: 95  FDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 154
           +DL  + L  +T   + S +  ++   Q  + +N T      ++ NS      LP++ DW
Sbjct: 81  YDLGMNHLADMTSEEVSSLMSSLRVPSQ--WQANVT------YKSNS---NQKLPDSVDW 129

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           R +G +++VK QG C  CWAFSAVG +EA   ++  NL  LS Q+
Sbjct: 130 REKGCVTEVKYQGACGACWAFSAVGALEAQLKLKTGNLVSLSAQN 174


>gi|56755191|gb|AAW25775.1| SJCHGC00511 protein [Schistosoma japonicum]
          Length = 454

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 40/279 (14%)

Query: 212 RRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQA 271
           +R   F +N+ KA+ YQ  + G+AV+GV  + DL+  +  +                L A
Sbjct: 175 KRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTTDEFSR--------------THLTA 220

Query: 272 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 331
           P+ ++     +     +  R   D+P  FDWR +G +++VK QG C  CWAFS  G +E+
Sbjct: 221 PWRASSKRNTI-----SPRREVGDIPNNFDWREKGAVTEVKNQGMCGSCWAFSTTGNIES 275

Query: 332 MHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 391
               +   L  LS QQLVDCD  + GCNGG   +A + II  GG++ +  YPY A   + 
Sbjct: 276 QWFRKTGKLLSLSEQQLVDCDSLDDGCNGGLPSNAYESIIRMGGLMLEDNYPYDAKNEKC 335

Query: 392 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV------ 445
              V     +       ++    +E E+  W+     +SVGMNA  L +Y  G+      
Sbjct: 336 HLKVANVAAYINSSVNLTQ----DESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWI 391

Query: 446 ------IDLNQRLYGTSI-----PYWIVKNSWGSDWGEK 473
                 +D    L G  +     P+WIVKNSWG +WGEK
Sbjct: 392 FCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGEK 430



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 8/156 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GCNGG   +A + II  GG++ +  YPY A   +    V   
Sbjct: 283 KLLSLSEQQLVDCDSLDDGCNGGLPSNAYESIIRMGGLMLEDNYPYDAKNEKCHLKVANV 342

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
             +       ++    +E E+  W+     +SVGMNA  L +Y  G+       C+    
Sbjct: 343 AAYINSSVNLTQ----DESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWIFCSKYLL 398

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +HA+++VGYG  EK +    P+WIVKNSWG +WGEK
Sbjct: 399 DHAVLLVGYGVSEKNE----PFWIVKNSWGVEWGEK 430



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 19/135 (14%)

Query: 64  RRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQA 123
           +R   F +N+ KA+ YQ  + G+AV+ V  + DL+  +  +                L A
Sbjct: 175 KRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTTDEFSR--------------THLTA 220

Query: 124 PFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEA 183
           P+ ++     +     +  R   D+P  FDWR +G +++VK QG C  CWAFS  G +E+
Sbjct: 221 PWRASSKRNTI-----SPRREVGDIPNNFDWREKGAVTEVKNQGMCGSCWAFSTTGNIES 275

Query: 184 MHAIQGNNLTELSVQ 198
               +   L  LS Q
Sbjct: 276 QWFRKTGKLLSLSEQ 290


>gi|41019551|tpe|CAD66657.1| TPA: putative cysteine proteinase precursor [Hordeum vulgare subsp.
           vulgare]
 gi|326489967|dbj|BAJ94057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326525847|dbj|BAJ93100.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 377

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 148/316 (46%), Gaps = 47/316 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           VQ   K Y   E+   R   F  N+ +A  +Q  D  +A  GV KF DL+ ++ ++ T L
Sbjct: 57  VQRFGKTYRDAEEHAHRLSVFKANLRRARRHQLLDP-SAEHGVTKFSDLTPAEFRR-TYL 114

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L +T    + S     + +  D  +           D LPE FDWR  G +  VK QG 
Sbjct: 115 GLKTT----RRSFLREMAGSAHDAPVLPT--------DGLPEDFDWRDHGAVGPVKNQGS 162

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDAL 367
           C  CW+FSA G +E  + +    +  LS QQLVDCD           + GCNGG M  A 
Sbjct: 163 CGSCWSFSASGALEGANYLASGKMEVLSEQQLVDCDHECDPSEPDSCDAGCNGGLMTSAF 222

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
            Y++ +GG+  ++ YPY   +   G    ++      V+ YS +   +EE++   +   G
Sbjct: 223 SYLLKSGGLEREKDYPYTGKD---GTCKFDKSKIAASVQNYSVVAV-DEEQIAANLVKYG 278

Query: 428 PLSVGMNANGLFYYSGGV---------IDLNQRL--YGTS---------IPYWIVKNSWG 467
           PL++G+NA  +  Y GGV         +D    L  YG S          PYWI+KNSWG
Sbjct: 279 PLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPSRFKEKPYWIIKNSWG 338

Query: 468 SDWGEKVEDKVGSSGN 483
            +WG+K   K+    N
Sbjct: 339 ENWGDKGYYKICRGSN 354



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 18/167 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           K+  L+ ++LVDCD           + GCNGG M  A  Y++ +GG+  ++ YPY   + 
Sbjct: 185 KMEVLSEQQLVDCDHECDPSEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKD- 243

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    ++      V+ YS +   +EE++   +   GPL++G+NA  +  Y GGV    
Sbjct: 244 --GTCKFDKSKIAASVQNYSVVAV-DEEQIAANLVKYGPLAIGINAAYMQTYIGGVS--C 298

Query: 608 QRLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGEK 652
             +C  +  +H +++VGYG            PYWI+KNSWG +WG+K
Sbjct: 299 PYICG-RHLDHGVLLVGYGASGFAPSRFKEKPYWIIKNSWGENWGDK 344



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 14/156 (8%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F+ F++   K Y   E+   R   F  N+ +A  +Q  D  +A   V KF DL+ ++ 
Sbjct: 51  SQFVGFVQRFGKTYRDAEEHAHRLSVFKANLRRARRHQLLDP-SAEHGVTKFSDLTPAEF 109

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           ++ T L L +T    + S     + +  D  +           D LPE FDWR  G +  
Sbjct: 110 RR-TYLGLKTT----RRSFLREMAGSAHDAPVLPT--------DGLPEDFDWRDHGAVGP 156

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CW+FSA G +E  + +    +  LS Q
Sbjct: 157 VKNQGSCGSCWSFSASGALEGANYLASGKMEVLSEQ 192


>gi|113208365|dbj|BAF03553.1| cysteine proteinase CP2 [Phaseolus vulgaris]
          Length = 365

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 149/315 (47%), Gaps = 61/315 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R   F +N+ +A  +   D  +AV GV KF DL+
Sbjct: 45  LNAEHHFSTFKAKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDP-SAVHGVTKFSDLT 103

Query: 247 ESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 306
            ++  +            ++P L+ P  + +            +   ++LP+ FDWR +G
Sbjct: 104 PAEFHR--------KFLGLKP-LRLPAHAQKA----------PILPTNNLPKDFDWRDKG 144

Query: 307 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGG 357
            ++ VK+QG C  CW+FS  G +E  H +    L  LS QQLVDCD           + G
Sbjct: 145 AVTNVKDQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGSCDSG 204

Query: 358 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 417
           CNGG M++A +Y+I +GGV  ++ YPY   +   G    ++      V  YS I   +EE
Sbjct: 205 CNGGLMNNAFEYLIGSGGVQREKDYPYTGRD---GTCKFDKSKIAASVSNYSVISL-DEE 260

Query: 418 EMKKWVATRGPLSVGMNANGLFYYSGGV---------IDLNQRLYG-----------TSI 457
           ++   +   GPL+V +NA  +  Y GGV         +D    L G              
Sbjct: 261 QIAANLVKNGPLAVAINAVYMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFKEK 320

Query: 458 PYWIVKNSWGSDWGE 472
           PYWI+KNSWG +WGE
Sbjct: 321 PYWIIKNSWGENWGE 335



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 30/172 (17%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M++A +Y+I +GGV  ++ YPY   + 
Sbjct: 177 ELVSLSEQQLVDCDHVCDPEEYGSCDSGCNGGLMNNAFEYLIGSGGVQREKDYPYTGRD- 235

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    ++      V  YS I   +EE++   +   GPL+V +NA  +  Y GGV    
Sbjct: 236 --GTCKFDKSKIAASVSNYSVISL-DEEQIAANLVKNGPLAVAINAVYMQTYVGGVS--C 290

Query: 608 QRLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
             +C  K  +H +++VGYGE        +EK      PYWI+KNSWG +WGE
Sbjct: 291 PYICG-KHLDHGVLLVGYGEGAYAPIRFKEK------PYWIIKNSWGENWGE 335



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 20/155 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F     K Y++ E+   R   F +N+ +A  + + D  +AV  V KF DL+ ++  
Sbjct: 50  HFSTFKAKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDP-SAVHGVTKFSDLTPAEFH 108

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +            ++P L+ P  + +            +   ++LP+ FDWR +G ++ V
Sbjct: 109 R--------KFLGLKP-LRLPAHAQKA----------PILPTNNLPKDFDWRDKGAVTNV 149

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CW+FS  G +E  H +    L  LS Q
Sbjct: 150 KDQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQ 184


>gi|358343350|ref|XP_003635767.1| Cysteine proteinase [Medicago truncatula]
 gi|355501702|gb|AES82905.1| Cysteine proteinase [Medicago truncatula]
          Length = 338

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 157/313 (50%), Gaps = 49/313 (15%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           E  ++ + + Y   E+   R + + +NV+  E Y S++    +   N+F D++  + +  
Sbjct: 40  ETWLKRYGRHYRDREEWEVRFDIYQSNVQYIEFYNSQNYSYKLID-NRFADITNEEFK-- 96

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                 ST     P  +      QT       +F   +HG+ LP++ DWR +G ++ VK+
Sbjct: 97  ------STYLGYLPRFRV-----QT-------EFRYHKHGE-LPKSIDWRKKGAVTHVKD 137

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG--GCNGGRMDDALQYII 371
           QG+C  CWAFSAV  VE ++ I+  +L  LS QQL+DCD+ +G  GC GG M  A  YI 
Sbjct: 138 QGRCGSCWAFSAVAAVEGINKIKTENLVSLSEQQLIDCDIKSGNEGCEGGDMYIAFNYIK 197

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
            +GG+ + + YPYK  +    C   + +   V +  Y  +P   E+ +K  VA + P+S+
Sbjct: 198 KHGGIATAKEYPYKGRDGN--CNKSKAKNNAVTISGYESVPARNEKMLKAAVAHQ-PVSI 254

Query: 432 GMNANG--LFYYSGGVI------DLNQRL----YG--TSIPYWIVKNSWGSDWGEK---- 473
             +A G    +YS G+       +LN  +    YG      YWIVKNSW +DWGE     
Sbjct: 255 ATDAGGYAFQFYSKGIFSGSCGKNLNHGMTIVGYGEENGDKYWIVKNSWANDWGESGYVR 314

Query: 474 ----VEDKVGSSG 482
                +DK G+ G
Sbjct: 315 MKRDTKDKDGTCG 327



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 16/166 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNG--GCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  +    L  L+ ++L+DCD+ +G  GC GG M  A  YI  +GG+ + + YPYK  + 
Sbjct: 156 INKIKTENLVSLSEQQLIDCDIKSGNEGCEGGDMYIAFNYIKKHGGIATAKEYPYKGRDG 215

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVID 605
              C   + +   V +  Y  +P   E+ +K  VA + P+S+  +A G    +YS G+  
Sbjct: 216 N--CNKSKAKNNAVTISGYESVPARNEKMLKAAVAHQ-PVSIATDAGGYAFQFYSKGIFS 272

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +   C  K  NH + IVGYGEE         YWIVKNSW +DWGE
Sbjct: 273 GS---CG-KNLNHGMTIVGYGEENGD-----KYWIVKNSWANDWGE 309



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 27/184 (14%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSPVT--RFLNFMRDHDKVYSSVEDLLRRHENFVTNVE 74
           L+ ++I  A  E     T+   N  V   R+  +++ + + Y   E+   R + + +NV+
Sbjct: 12  LNLWIIASACPE---IHTKNSTNPAVMKKRYETWLKRYGRHYRDREEWEVRFDIYQSNVQ 68

Query: 75  KAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM 134
             E Y  ++    + + N+F D+++ + +        ST     P  +      QT    
Sbjct: 69  YIEFYNSQNYSYKLID-NRFADITNEEFK--------STYLGYLPRFRV-----QT---- 110

Query: 135 RAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTE 194
              +F   +HG+ LP++ DWR +G ++ VK+QG+C  CWAFSAV  VE ++ I+  NL  
Sbjct: 111 ---EFRYHKHGE-LPKSIDWRKKGAVTHVKDQGRCGSCWAFSAVAAVEGINKIKTENLVS 166

Query: 195 LSVQ 198
           LS Q
Sbjct: 167 LSEQ 170


>gi|3023456|sp|Q26534.1|CATL_SCHMA RecName: Full=Cathepsin L; AltName: Full=SMCL1; Flags: Precursor
 gi|555663|gb|AAC46485.1| preprocathepsin L [Schistosoma mansoni]
 gi|1094710|prf||2106314A cathepsin L
          Length = 319

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 151/302 (50%), Gaps = 42/302 (13%)

Query: 191 NLTELSVQH---HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSE 247
           N+ E  VQ    + K Y   ED +R +  F +N+ KA+ YQ    G+A++GV  + DL+ 
Sbjct: 15  NVDEKYVQFKLKYRKQYHETEDEIRFNI-FKSNILKAQLYQVFVRGSAIYGVTPYSDLTT 73

Query: 248 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 307
            +  +            +  S   P S + T T +        +  +++P+ FDWR +G 
Sbjct: 74  DEFAR----------THLTASWVVPSSRSNTPTSLG-------KEVNNIPKNFDWREKGA 116

Query: 308 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDAL 367
           +++VK QG C  CWAFS  G VE+    +   L  LS QQLVDCD  + GCNGG   +A 
Sbjct: 117 VTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGLDDGCNGGLPSNAY 176

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           + II  GG++ +  YPY A ++E+  L  + +G  V +     +   +E E+  W+    
Sbjct: 177 ESIIKMGGLMLEDNYPYDA-KNEKCHL--KTDGVAVYINSSVNLT-QDETELAAWLYHNS 232

Query: 428 PLSVGMNANGLFYYSGGV------------IDLNQRLYGTSI-----PYWIVKNSWGSDW 470
            +SVGMNA  L +Y  G+            +D    L G  +     P+WIVKNSWG +W
Sbjct: 233 TISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEW 292

Query: 471 GE 472
           GE
Sbjct: 293 GE 294



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 8/155 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  + GCNGG   +A + II  GG++ +  YPY A ++E+  L  + 
Sbjct: 148 KLLSLSEQQLVDCDGLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDA-KNEKCHL--KT 204

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           +G  V +     +   +E E+  W+     +SVGMNA  L +Y  G+       C+    
Sbjct: 205 DGVAVYINSSVNLT-QDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLL 263

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +HA+++VGYG  EK +    P+WIVKNSWG +WGE
Sbjct: 264 DHAVLLVGYGVSEKNE----PFWIVKNSWGVEWGE 294



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 18/156 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +++ F   + K Y   ED +R +  F +N+ KA+ YQ    G+A++ V  + DL+  +  
Sbjct: 19  KYVQFKLKYRKQYHETEDEIRFNI-FKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFA 77

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +            +  S   P S + T T +        +  +++P+ FDWR +G +++V
Sbjct: 78  R----------THLTASWVVPSSRSNTPTSLG-------KEVNNIPKNFDWREKGAVTEV 120

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CWAFS  G VE+    +   L  LS Q 
Sbjct: 121 KNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQ 156


>gi|403302736|ref|XP_003942009.1| PREDICTED: cathepsin K isoform 2 [Saimiri boliviensis boliviensis]
          Length = 383

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 148/300 (49%), Gaps = 41/300 (13%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS-GTAVF--GVNKFFDL-SESD 249
           EL  + H K Y+S  D + R   +  N++    +  E S G   F   +N   D+ SE  
Sbjct: 81  ELWKKTHRKQYTSKVDEISRRLIWEKNLKYISIHNLEASLGVHTFELAMNHLGDMTSEEV 140

Query: 250 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
           +Q++TGL + ++      +L  P      D E RA            P++ D+R +G ++
Sbjct: 141 VQKMTGLKVPTSFSRSNDTLYIP------DWEGRA------------PDSVDYRKKGYVT 182

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQY 369
            VK QG+C  CWAFS+VG +E     +   L  LS Q LVDC   N GC GG M +A QY
Sbjct: 183 PVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQY 242

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           +  N G+ S+ AYPY     E  C+     G   K + Y  IP G E+ +K+ VA  GP+
Sbjct: 243 VQKNRGIDSEDAYPYVG--QEESCMYN-PTGKAAKCRGYREIPEGNEKALKRAVARVGPI 299

Query: 430 SVGMNAN--GLFYYSGGVI--------DLNQRL----YGTSI--PYWIVKNSWGSDWGEK 473
           SV ++A+     +YS GV         +LN  +    YG      +WI+KNSWG +WG K
Sbjct: 300 SVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNK 359



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ + LVDC   N GC GG M +A QY+  N G+ S+ AYPY     E  C+    
Sbjct: 212 KLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVG--QEESCMYN-P 268

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNPK 614
            G   K + Y  IP G E+ +K+ VA  GP+SV ++A+     +YS GV       CN  
Sbjct: 269 TGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGV--YYDESCNSD 326

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             NHA++ VGYG ++        +WI+KNSWG +WG K
Sbjct: 327 NLNHAVLAVGYGIQKGNK-----HWIIKNSWGENWGNK 359



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 31/191 (16%)

Query: 13  GLGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTN 72
           GL  L   M+  AL    I  T   L         + + H K Y+S  D + R   +  N
Sbjct: 57  GLKVLLLPMVSFALYPEEILDTHWEL---------WKKTHRKQYTSKVDEISRRLIWEKN 107

Query: 73  VEKAEDYQREDS-GTAVFEV--NKFFDLSDSDL-QQLTGLNLDSTLEDIQPSLQAPFSSN 128
           ++    +  E S G   FE+  N   D++  ++ Q++TGL + ++      +L  P    
Sbjct: 108 LKYISIHNLEASLGVHTFELAMNHLGDMTSEEVVQKMTGLKVPTSFSRSNDTLYIP---- 163

Query: 129 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
             D E RA            P++ D+R +G ++ VK QG+C  CWAFS+VG +E     +
Sbjct: 164 --DWEGRA------------PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKK 209

Query: 189 GNNLTELSVQH 199
              L  LS Q+
Sbjct: 210 TGKLLNLSPQN 220


>gi|118150|sp|P25804.1|CYSP_PEA RecName: Full=Cysteine proteinase 15A; AltName:
           Full=Turgor-responsive protein 15A; Flags: Precursor
 gi|20679|emb|CAA38242.1| unnamed protein product [Pisum sativum]
          Length = 363

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 152/318 (47%), Gaps = 63/318 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R   F +N+ KA+ +Q+ D  TA  G+ KF DL+
Sbjct: 42  LNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDP-TAEHGITKFSDLT 100

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
            S+ + Q  GL         +  L+ P  + +            +    +LPE FDWR +
Sbjct: 101 ASEFRRQFLGL---------KKRLRLPAHAQKA----------PILPTTNLPEDFDWREK 141

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNG 356
           G ++ VK+QG C  CWAFS  G +E  H +    L  LS QQLVDCD           + 
Sbjct: 142 GAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDS 201

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M++A +Y++++GGVV ++ Y Y   +   G    ++      V  +S +   +E
Sbjct: 202 GCNGGLMNNAFEYLLESGGVVQEKDYAYTGRD---GSCKFDKSKVVASVSNFSVVTL-DE 257

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV----------IDLNQRLYG-----------T 455
           +++   +   GPL+V +NA  +  Y  GV          +D    L G            
Sbjct: 258 DQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLK 317

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSWG +WGE+
Sbjct: 318 EKPYWIIKNSWGQNWGEQ 335



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 41/212 (19%)

Query: 469 DWGEK-----VEDKVGSSGN-----RTRDLELTGVLPS-KLSRLATEKLVDCDM------ 511
           DW EK     V+D+ GS G+      T  LE    L + KL  L+ ++LVDCD       
Sbjct: 137 DWREKGAVTPVKDQ-GSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQ 195

Query: 512 ---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSR 568
               + GCNGG M++A +Y++++GGVV ++ Y Y   +   G    ++      V  +S 
Sbjct: 196 AGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRD---GSCKFDKSKVVASVSNFSV 252

Query: 569 IPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE- 627
           +   +E+++   +   GPL+V +NA  +  Y  GV      +C     +H +++VG+G+ 
Sbjct: 253 VTL-DEDQIAANLVKNGPLAVAINAAWMQTYMSGVS--CPYVCAKSRLDHGVLLVGFGKG 309

Query: 628 -------EEKKDGTSIPYWIVKNSWGSDWGEK 652
                  +EK      PYWI+KNSWG +WGE+
Sbjct: 310 AYAPIRLKEK------PYWIIKNSWGQNWGEQ 335



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 21/156 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F +F     K Y++ E+   R   F +N+ KA+ +Q  D  TA   + KF DL+ S+ +
Sbjct: 47  HFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDP-TAEHGITKFSDLTASEFR 105

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  GL         +  L+ P  + +            +    +LPE FDWR +G ++ 
Sbjct: 106 RQFLGL---------KKRLRLPAHAQKA----------PILPTTNLPEDFDWREKGAVTP 146

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG C  CWAFS  G +E  H +    L  LS Q
Sbjct: 147 VKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQ 182


>gi|115441717|ref|NP_001045138.1| Os01g0907600 [Oryza sativa Japonica Group]
 gi|5761329|dbj|BAA83473.1| cysteine endopeptidase [Oryza sativa]
 gi|20804884|dbj|BAB92565.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|56785107|dbj|BAD82745.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113534669|dbj|BAF07052.1| Os01g0907600 [Oryza sativa Japonica Group]
 gi|119395242|gb|ABL74582.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|125528777|gb|EAY76891.1| hypothetical protein OsI_04850 [Oryza sativa Indica Group]
 gi|125573036|gb|EAZ14551.1| hypothetical protein OsJ_04473 [Oryza sativa Japonica Group]
          Length = 371

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 143/293 (48%), Gaps = 35/293 (11%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGL 256
           Q H  V     +  RR   F  NV    ++           +N+F D+   + +    G 
Sbjct: 50  QEHHHVPRHHGEKHRRFGAFKDNVRYIHEHNKRGGRGYRLRLNRFGDMGREEFRATFAGS 109

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           + +    D    L AP         +  F +  +R   DLP A DWR +G ++ VK+QGK
Sbjct: 110 HANDLRRD---GLAAP--------PLPGFMYEGVR---DLPRAVDWRRKGAVTGVKDQGK 155

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS V  VE ++AI+   L  LS Q+L+DCD + N GC GG M++A +YI  +GG
Sbjct: 156 CGSCWAFSTVVSVEGINAIRTGRLVSLSEQELIDCDTADNSGCQGGLMENAFEYIKHSGG 215

Query: 376 VVSDQAYPYKASESERGC-LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           + ++ AYPY+A+     C  V       V +  +  +P   E  + K VA + P+SV ++
Sbjct: 216 ITTESAYPYRAANGT--CDAVRARRAPLVVIDGHQNVPANSEAALAKAVANQ-PVSVAID 272

Query: 435 A--NGLFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           A      +YS GV       DL+  +    YG +     YWIVKNSWG+ WGE
Sbjct: 273 AGDQSFQFYSDGVFAGDCGTDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGE 325



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 19/168 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +   +L  L+ ++L+DCD + N GC GG M++A +YI  +GG+ ++ AYPY+A+   
Sbjct: 171 INAIRTGRLVSLSEQELIDCDTADNSGCQGGLMENAFEYIKHSGGITTESAYPYRAANGT 230

Query: 549 RGC-LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI- 604
             C  V       V +  +  +P   E  + K VA + P+SV ++A      +YS GV  
Sbjct: 231 --CDAVRARRAPLVVIDGHQNVPANSEAALAKAVANQ-PVSVAIDAGDQSFQFYSDGVFA 287

Query: 605 -DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            D    L      +H + +VGYG  E  DGT   YWIVKNSWG+ WGE
Sbjct: 288 GDCGTDL------DHGVAVVGYG--ETNDGTE--YWIVKNSWGTAWGE 325



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 15/150 (10%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGL 108
           ++H  V     +  RR   F  NV    ++ +         +N+F D+   + +    G 
Sbjct: 50  QEHHHVPRHHGEKHRRFGAFKDNVRYIHEHNKRGGRGYRLRLNRFGDMGREEFRATFAGS 109

Query: 109 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 168
           + +    D    L AP         +  F +  +R   DLP A DWR +G ++ VK+QGK
Sbjct: 110 HANDLRRD---GLAAP--------PLPGFMYEGVR---DLPRAVDWRRKGAVTGVKDQGK 155

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           C  CWAFS V  VE ++AI+   L  LS Q
Sbjct: 156 CGSCWAFSTVVSVEGINAIRTGRLVSLSEQ 185


>gi|334332718|ref|XP_001367502.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 333

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/296 (34%), Positives = 149/296 (50%), Gaps = 44/296 (14%)

Query: 199 HHDKVYSSVEDLLRRH--ENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
            H K Y + ED LRR   E  +  +E+     S    +    +NKF D+S  + +Q+   
Sbjct: 35  QHGKSYEANEDSLRRATWEKNLKMIERHNQEYSAGKHSFQLRMNKFGDMSTEEFKQVMN- 93

Query: 257 NLDSTLEDIQPSLQAPFSSN--QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
                           + SN  Q  T+   ++ + L     LPE+ DWR +G ++ VKEQ
Sbjct: 94  ---------------GYKSNGSQRRTKGSLYRESLLAQ---LPESVDWREKGYVTPVKEQ 135

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIID 372
           G C  CW+FSAVG +E     +   L  LS+Q L+DC +   N GC+GG MD+A QY+ D
Sbjct: 136 GDCGACWSFSAVGAIEGQWFRKTGKLVSLSIQNLIDCTIPEGNNGCDGGFMDNAFQYVQD 195

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ +++ YPY A ++E  C   + E     +  +  IP  +E  + + VAT GP+SVG
Sbjct: 196 NGGIDTEECYPYVAQDTE--CKY-KPECSGANITGFVDIPSMDERALMEAVATVGPISVG 252

Query: 433 MN-ANGLF-YYSGGV-----IDLNQRLYGTSI---------PYWIVKNSWGSDWGE 472
           ++ AN  F +Y  GV        +Q  +G  +          YWIVKNSWG  WG+
Sbjct: 253 IDSANPSFKFYQSGVYYEPDCSSSQLDHGVLVVGYGSIGKDEYWIVKNSWGEAWGD 308



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 93/159 (58%), Gaps = 14/159 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + L+DC +   N GC+GG MD+A QY+ DNGG+ +++ YPY A ++E  C   
Sbjct: 160 KLVSLSIQNLIDCTIPEGNNGCDGGFMDNAFQYVQDNGGIDTEECYPYVAQDTE--CKY- 216

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN-ANGLF-YYSGGVIDLNQRLCN 612
           + E     +  +  IP  +E  + + VAT GP+SVG++ AN  F +Y  GV    +  C+
Sbjct: 217 KPECSGANITGFVDIPSMDERALMEAVATVGPISVGIDSANPSFKFYQSGV--YYEPDCS 274

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               +H +++VGYG   K +     YWIVKNSWG  WG+
Sbjct: 275 SSQLDHGVLVVGYGSIGKDE-----YWIVKNSWGEAWGD 308



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 25/153 (16%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS-GTAVFEV--NKFFDLSDSDLQQLTGL 108
           H K Y + ED LRR   +  N++  E + +E S G   F++  NKF D+S  + +Q+   
Sbjct: 36  HGKSYEANEDSLRR-ATWEKNLKMIERHNQEYSAGKHSFQLRMNKFGDMSTEEFKQVMN- 93

Query: 109 NLDSTLEDIQPSLQAPFSSN--QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
                           + SN  Q  T+   ++ + L     LPE+ DWR +G ++ VKEQ
Sbjct: 94  ---------------GYKSNGSQRRTKGSLYRESLLAQ---LPESVDWREKGYVTPVKEQ 135

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           G C  CW+FSAVG +E     +   L  LS+Q+
Sbjct: 136 GDCGACWSFSAVGAIEGQWFRKTGKLVSLSIQN 168


>gi|327289219|ref|XP_003229322.1| PREDICTED: cathepsin K-like, partial [Anolis carolinensis]
          Length = 289

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 136/257 (52%), Gaps = 38/257 (14%)

Query: 234 TAVFGVNKFFDLSESDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH 292
           T    +N   D++  +L Q++TGL +  + +    +L  P      D E R         
Sbjct: 30  TFELAMNHLGDMTSEELVQKMTGLKVPLSRKPSNDTLYIP------DWEER--------- 74

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
              +P+A D+R +G ++ VK QG+C  CWAFS+VG +EA   ++   L  LS Q LVDC 
Sbjct: 75  ---VPDAVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEAQLKMKTGKLLNLSPQNLVDCV 131

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
            +N GC GG M +A +Y+  N G+ SD  YPY   +    C+     G   K + Y  IP
Sbjct: 132 SNNDGCGGGYMTNAFEYVHVNRGIDSDDTYPYIGQDEN--CMY-NPTGKAAKCRGYKEIP 188

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI--------DLNQRL----YGTS-- 456
            G+E+ +K+ VA +GP+SVG++A+     +YS GV         ++N  +    YG+   
Sbjct: 189 EGDEKALKRAVARKGPVSVGIDASLASFQFYSRGVYYDENCNADNINHAVLAVGYGSQKG 248

Query: 457 IPYWIVKNSWGSDWGEK 473
             +WIVKNSWG DWG+K
Sbjct: 249 TKHWIVKNSWGEDWGDK 265



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 92/159 (57%), Gaps = 14/159 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ + LVDC  +N GC GG M +A +Y+  N G+ SD  YPY   +    C+    
Sbjct: 118 KLLNLSPQNLVDCVSNNDGCGGGYMTNAFEYVHVNRGIDSDDTYPYIGQDEN--CMY-NP 174

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLNQRLCNP 613
            G   K + Y  IP G+E+ +K+ VA +GP+SVG++A+     FY  G   D N   CN 
Sbjct: 175 TGKAAKCRGYKEIPEGDEKALKRAVARKGPVSVGIDASLASFQFYSRGVYYDEN---CNA 231

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              NHA++ VGYG ++   GT   +WIVKNSWG DWG+K
Sbjct: 232 DNINHAVLAVGYGSQK---GTK--HWIVKNSWGEDWGDK 265



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 21/118 (17%)

Query: 85  GTAVFEV--NKFFDLSDSDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 141
           G   FE+  N   D++  +L Q++TGL +  + +    +L  P      D E R      
Sbjct: 27  GRHTFELAMNHLGDMTSEELVQKMTGLKVPLSRKPSNDTLYIP------DWEER------ 74

Query: 142 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
                 +P+A D+R +G ++ VK QG+C  CWAFS+VG +EA   ++   L  LS Q+
Sbjct: 75  ------VPDAVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEAQLKMKTGKLLNLSPQN 126


>gi|91085671|ref|XP_971698.1| PREDICTED: similar to cathepsin L-like protein; cysteine proteinase
           [Tribolium castaneum]
 gi|270011034|gb|EFA07482.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 150/294 (51%), Gaps = 37/294 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSG--TAVFGVNKFFDLSESDLQQLT-G 255
           H+K Y + ++   R + F   +E+ E +    + G  T   G+N F D++  +++  T G
Sbjct: 34  HEKSYLNAKEEAFRKQIFQKKLERIEAHNERFNKGLETYTMGINMFTDMTPEEMRPYTHG 93

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
           L        I+P++       +   E+++     L H    P +FDWR +G+++ VK QG
Sbjct: 94  L--------IEPAVVP-----KPLVEIKSRADLGLNHSVQYPASFDWRDKGMVTGVKNQG 140

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSV--QQLVDCDMSNGGCNGGRMDDALQYIIDN 373
            C  CWAFS+ G +E+   I   + T++SV  QQLVDCD +  GC GG M DA  YI   
Sbjct: 141 GCGSCWAFSSTGAIESQVKIAKGANTDISVSEQQLVDCDTAADGCGGGWMTDAFTYIAQT 200

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ S+ +YPYK    +  C    ++    K+K Y+ +   +E  +   V+++GP+SV  
Sbjct: 201 GGIDSESSYPYKG--VDESCHFMSDK-VAAKLKGYAYLTGPDENMLADMVSSKGPVSVAF 257

Query: 434 NANGLF-YYSGGV-----IDLNQRLYGTSI---------PYWIVKNSWGSDWGE 472
           +A G F  YSGGV        N+  +   I          YW+VKNSWG  WGE
Sbjct: 258 DAEGDFGSYSGGVYYNPNCATNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGE 311



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 11/152 (7%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           ++ ++LVDCD +  GC GG M DA  YI   GG+ S+ +YPYK    +  C    ++   
Sbjct: 170 VSEQQLVDCDTAADGCGGGWMTDAFTYIAQTGGIDSESSYPYKG--VDESCHFMSDK-VA 226

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF-YYSGGVIDLNQRLCNPKAQNHA 619
            K+K Y+ +   +E  +   V+++GP+SV  +A G F  YSGGV       C      HA
Sbjct: 227 AKLKGYAYLTGPDENMLADMVSSKGPVSVAFDAEGDFGSYSGGV--YYNPNCATNKFTHA 284

Query: 620 LIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           ++IVGYG E  +D     YW+VKNSWG  WGE
Sbjct: 285 VLIVGYGNENGQD-----YWLVKNSWGDGWGE 311



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 19/184 (10%)

Query: 26  LLESNIFQTRGYLNSPVT--RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY-QRE 82
           +L   I+ T   L+      ++ +F + H+K Y + ++   R + F   +E+ E + +R 
Sbjct: 6   ILALAIYGTSASLSKDFVEEKWESFKKTHEKSYLNAKEEAFRKQIFQKKLERIEAHNERF 65

Query: 83  DSG--TAVFEVNKFFDLSDSDLQQLT-GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF 139
           + G  T    +N F D++  +++  T GL        I+P++       +   E+++   
Sbjct: 66  NKGLETYTMGINMFTDMTPEEMRPYTHGL--------IEPAVVP-----KPLVEIKSRAD 112

Query: 140 NSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
             L H    P +FDWR +G+++ VK QG C  CWAFS+ G +E+   I     T++SV  
Sbjct: 113 LGLNHSVQYPASFDWRDKGMVTGVKNQGGCGSCWAFSSTGAIESQVKIAKGANTDISVSE 172

Query: 200 HDKV 203
              V
Sbjct: 173 QQLV 176


>gi|307111936|gb|EFN60170.1| hypothetical protein CHLNCDRAFT_59551 [Chlorella variabilis]
          Length = 364

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 142/288 (49%), Gaps = 40/288 (13%)

Query: 205 SSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLED 264
           SS E   RR   ++ N+  A +Y +  + +    +  + DLS+ + +    L  ++ L  
Sbjct: 63  SSAEVYERRFNIWLDNLRFAHEYNARHT-SHWLSMGVYADLSQDEYRS-KALGYNAHLHK 120

Query: 265 IQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFS 324
            +P   APF                L  G   PE  DW A G ++ VK+Q  C  CWAFS
Sbjct: 121 KRPLRAAPF----------------LYKGTVPPEEVDWVAGGAVTPVKDQLLCGSCWAFS 164

Query: 325 AVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYP 383
             G VE  +AI    L  LS Q LVDCD   + GC GG MD A  +I++NGG+ ++  YP
Sbjct: 165 TTGAVEGANAIATGKLVSLSEQMLVDCDREYDTGCRGGFMDSAFDFIVNNGGIDTEDDYP 224

Query: 384 YKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--Y 441
           Y+A +    C         V +  Y  +P  +E  + K VA + P+SV + A+ L +  Y
Sbjct: 225 YRAEDGI--CQDNRTRRHVVTIDGYQDVPPNDENALMKAVAHQ-PVSVAIEADQLAFQLY 281

Query: 442 SGGVID------LNQRL----YGTS------IPYWIVKNSWGSDWGEK 473
            GGV D      L+  +    YGT+      +PYW+VKNSWG++WGEK
Sbjct: 282 GGGVFDAECGTALDHAVLVVGYGTASNGTHNLPYWLVKNSWGAEWGEK 329



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 95/165 (57%), Gaps = 13/165 (7%)

Query: 492 GVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
            +   KL  L+ + LVDCD   + GC GG MD A  +I++NGG+ ++  YPY+A +    
Sbjct: 174 AIATGKLVSLSEQMLVDCDREYDTGCRGGFMDSAFDFIVNNGGIDTEDDYPYRAEDGI-- 231

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQ 608
           C         V +  Y  +P  +E  + K VA + P+SV + A+ L +  Y GGV D   
Sbjct: 232 CQDNRTRRHVVTIDGYQDVPPNDENALMKAVAHQ-PVSVAIEADQLAFQLYGGGVFDAE- 289

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGT-SIPYWIVKNSWGSDWGEK 652
             C   A +HA+++VGYG     +GT ++PYW+VKNSWG++WGEK
Sbjct: 290 --CG-TALDHAVLVVGYG--TASNGTHNLPYWLVKNSWGAEWGEK 329



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 60/142 (42%), Gaps = 18/142 (12%)

Query: 57  SSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLED 116
           SS E   RR   ++ N+  A +Y    + +    +  + DLS  + +    L  ++ L  
Sbjct: 63  SSAEVYERRFNIWLDNLRFAHEYNARHT-SHWLSMGVYADLSQDEYRS-KALGYNAHLHK 120

Query: 117 IQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFS 176
            +P   APF                L  G   PE  DW A G ++ VK+Q  C  CWAFS
Sbjct: 121 KRPLRAAPF----------------LYKGTVPPEEVDWVAGGAVTPVKDQLLCGSCWAFS 164

Query: 177 AVGVVEAMHAIQGNNLTELSVQ 198
             G VE  +AI    L  LS Q
Sbjct: 165 TTGAVEGANAIATGKLVSLSEQ 186


>gi|33333714|gb|AAQ11975.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 323

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 148/297 (49%), Gaps = 50/297 (16%)

Query: 200 HDKVYSSVEDLLRRHENFVTN-VEKAEDYQSEDSGTAVFG--VNKFFDLSESDLQQLTGL 256
           H K Y SV +  RR   F  N ++  E  +  + G   F   V +F D++  +   L  L
Sbjct: 30  HGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFADMTHEEFLDLLKL 89

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                L    PS    F   +TD E +              +A DWR EG ++ VK QG 
Sbjct: 90  QGVPAL----PSDAVYFE--ETDIEEK--------------DAVDWRKEGAVTPVKNQGH 129

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS---NGGCNGGRMDDALQYIIDN 373
           C  CWAFSAVG +E     +  +L  LS Q+LVDC      N GCNGG M  A  ++ D 
Sbjct: 130 CGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEYYGNEGCNGGLMGQAFDFVEDE 189

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++++YPYKA  S   C +  E  +  KVK Y  +    E+E+ + V+ +GP++V +
Sbjct: 190 -GIQTEESYPYKAKRSI--CQMNGE--YVTKVKTYHLLL--NEQEIARAVSAKGPVAVAI 242

Query: 434 NANGLFYYSGGVI-----------DLNQRL----YGTS--IPYWIVKNSWGSDWGEK 473
           +A+ L +Y  G++           DLN  +    YG+   + YWIVKNSWG+DWGEK
Sbjct: 243 DASQLSFYDQGIVDEKCKCSKKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 299



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 96/160 (60%), Gaps = 18/160 (11%)

Query: 498 LSRLATEKLVDCDMS---NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           L  L+ ++LVDC      N GCNGG M  A  ++ D G + ++++YPYKA  S   C + 
Sbjct: 153 LVSLSAQELVDCATEYYGNEGCNGGLMGQAFDFVEDEG-IQTEESYPYKAKRSI--CQMN 209

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            E  +  KVK Y  +    E+E+ + V+ +GP++V ++A+ L +Y  G++D   + C+ K
Sbjct: 210 GE--YVTKVKTYHLLL--NEQEIARAVSAKGPVAVAIDASQLSFYDQGIVDEKCK-CSKK 264

Query: 615 AQ--NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  NH +++VGYG E       + YWIVKNSWG+DWGEK
Sbjct: 265 REDLNHGVLVVGYGSE-----NGVDYWIVKNSWGADWGEK 299



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 68/154 (44%), Gaps = 23/154 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTN-VEKAEDYQREDSGTAVF--EVNKFFDLSDSDLQQ 104
           F  DH K Y SV +  RR   F  N ++  E  ++ + G   F  +V +F D++  +   
Sbjct: 26  FKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFADMTHEEFLD 85

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           L  L     L    PS    F   +TD E +              +A DWR EG ++ VK
Sbjct: 86  LLKLQGVPAL----PSDAVYFE--ETDIEEK--------------DAVDWRKEGAVTPVK 125

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFSAVG +E     +   L  LS Q
Sbjct: 126 NQGHCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQ 159


>gi|224121800|ref|XP_002330656.1| predicted protein [Populus trichocarpa]
 gi|222872260|gb|EEF09391.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 147/291 (50%), Gaps = 37/291 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + KVY    +  RR + F  NVE  E + +  +      VNKF D +            +
Sbjct: 45  YGKVYVDAAEKERRFKIFKNNVEYIESFNTAGNKPYKLSVNKFADQT------------N 92

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
              +  +   + PF +     ++ +F++ ++     +P   DWR +G ++ +K+QG+C  
Sbjct: 93  EKFKGARNGYRRPFQTR--PMKVTSFKYENVTA---VPATMDWRKKGAVTLIKDQGQCGS 147

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVV 377
           CWAFS V   E ++ +    L  LS Q+LVDCD+   + GC GG M+D  ++II N G+ 
Sbjct: 148 CWAFSTVAATEGINQLTTGKLVSLSEQELVDCDIQGEDQGCEGGLMEDGFEFIIKNHGIT 207

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++  YPY+A++    C   ++     K+  Y  +P   E E+ K VA + P+SV ++A G
Sbjct: 208 TEANYPYQAADGT--CNSKKQASHIAKITGYESVPANSEAELLKVVANQ-PISVSIDAGG 264

Query: 438 --LFYYSGGVI------DLNQRL----YGTS---IPYWIVKNSWGSDWGEK 473
               +YS GV       +L+  +    YG +     YW+VKNSWG+ WGE+
Sbjct: 265 SDFQFYSSGVFTGKCGTELDHGVTAVGYGETSDGTKYWLVKNSWGTSWGEE 315



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ ++LVDCD+   + GC GG M+D  ++II N G+ ++  YPY+A++    C   
Sbjct: 167 KLVSLSEQELVDCDIQGEDQGCEGGLMEDGFEFIIKNHGITTEANYPYQAADGT--CNSK 224

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           ++     K+  Y  +P   E E+ K VA + P+SV ++A G    +YS GV       C 
Sbjct: 225 KQASHIAKITGYESVPANSEAELLKVVANQ-PISVSIDAGGSDFQFYSSGVFTGK---CG 280

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +  VGYG  E  DGT   YW+VKNSWG+ WGE+
Sbjct: 281 TEL-DHGVTAVGYG--ETSDGTK--YWLVKNSWGTSWGEE 315



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 17/155 (10%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R   +M  + KVY    +  RR + F  NVE  E +    +      VNKF D ++   +
Sbjct: 37  RHEQWMATYGKVYVDAAEKERRFKIFKNNVEYIESFNTAGNKPYKLSVNKFADQTNEKFK 96

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                         +   + PF +     ++ +F++ ++     +P   DWR +G ++ +
Sbjct: 97  ------------GARNGYRRPFQTR--PMKVTSFKYENVTA---VPATMDWRKKGAVTLI 139

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C  CWAFS V   E ++ +    L  LS Q
Sbjct: 140 KDQGQCGSCWAFSTVAATEGINQLTTGKLVSLSEQ 174


>gi|42564157|gb|AAS20590.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 322

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 150/310 (48%), Gaps = 44/310 (14%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLT 254
           Q H K Y S+ +   R   F  N+   E + +E + G   +   V +F D++  + ++  
Sbjct: 28  QTHGKTYKSLLEERTRFGIFQNNLRTIEKHNAEYEEGKVTYYMAVTQFADMTRDEFRKKL 87

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
           GL       + +P+L A       D E              LPE  DW  +G +   K Q
Sbjct: 88  GLQ-----NNRRPNLNATLRVFPEDLE--------------LPEQIDWTEKGAVLPAKNQ 128

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGC-NGGRMDDALQYII 371
           G C  CWAFS  G +E  +AI     T LS QQL+DC  S  NG C +GG M +A  YII
Sbjct: 129 GNCRSCWAFSTTGSLEGQNAIHNKVKTPLSEQQLLDCSASYGNGDCDDGGLMTEAFDYII 188

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           DN G+ ++ +YPY    +E  C    ++   V++K Y ++   +E+E+KK V T GP+SV
Sbjct: 189 DN-GIEAESSYPYVEQMTE--CQYDAKKTI-VQIKGYKKL-LADEDELKKAVGTVGPISV 243

Query: 432 GMNANGLFYYSGGVIDLNQRLYG-------------TSIPYWIVKNSWGSDWGEKVEDKV 478
           GM++  L  Y GGV+D +Q  +G                 +W VKNSWG+ WGE    ++
Sbjct: 244 GMSSENLHMYGGGVLD-DQCYFGMDHAVLVVGYGEANGKKFWKVKNSWGTTWGEDGYFRI 302

Query: 479 GSSGNRTRDL 488
               N   D+
Sbjct: 303 ERDANNLCDI 312



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 17/154 (11%)

Query: 501 LATEKLVDCDMS--NGGCN-GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L+ ++L+DC  S  NG C+ GG M +A  YIIDNG + ++ +YPY    +E  C    ++
Sbjct: 157 LSEQQLLDCSASYGNGDCDDGGLMTEAFDYIIDNG-IEAESSYPYVEQMTE--CQYDAKK 213

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
              V++K Y ++   +E+E+KK V T GP+SVGM++  L  Y GGV+D           +
Sbjct: 214 TI-VQIKGYKKL-LADEDELKKAVGTVGPISVGMSSENLHMYGGGVLDDQCYF----GMD 267

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           HA+++VGYGE   K      +W VKNSWG+ WGE
Sbjct: 268 HAVLVVGYGEANGK-----KFWKVKNSWGTTWGE 296



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 22/159 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQ---REDSGTAVFEVNKFFDLSDS 100
           +++ F + H K Y S+ +   R   F  N+   E +     E   T    V +F D++  
Sbjct: 22  QWVAFKQTHGKTYKSLLEERTRFGIFQNNLRTIEKHNAEYEEGKVTYYMAVTQFADMTRD 81

Query: 101 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
           + ++  GL       + +P+L A       D E              LPE  DW  +G +
Sbjct: 82  EFRKKLGLQ-----NNRRPNLNATLRVFPEDLE--------------LPEQIDWTEKGAV 122

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
              K QG C  CWAFS  G +E  +AI     T LS Q 
Sbjct: 123 LPAKNQGNCRSCWAFSTTGSLEGQNAIHNKVKTPLSEQQ 161


>gi|1581746|prf||2117247B Cys protease:ISOTYPE=2
          Length = 467

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 135/290 (46%), Gaps = 31/290 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H KVY S  +   R   F  N+  A  + + +   A FGV  F DL            
Sbjct: 43  QRHGKVYGSAAEEAFRLGVFKENLLFARLHAAANP-HASFGVTPFSDL------------ 89

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
              T E+ +       +      +               P A DWRA G ++ +K+QG C
Sbjct: 90  ---TREEFRSRYHNAAAHFAAAQKRVRVPVEVEVEVGGAPAAVDWRARGAVTAIKDQGGC 146

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFS +G +E    + GN LT LS Q LV CD ++ GC+GG MD A  +I+  +NG 
Sbjct: 147 GSCWAFSTIGNIEGQWHLAGNPLTGLSEQMLVSCDNADNGCDGGLMDSAFDWIVGQNNGS 206

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +Y Y +   +              +  +  +P  +E++M  W+A  GPL++ ++A
Sbjct: 207 VYTEASYSYVSGGGDSQTCNMSSHVVGAVISGHVDLPQ-DEDKMAAWLAVNGPLAIAVDA 265

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
                Y+GGV        +D    L G    ++ PYWI+KNSWG+DWGE+
Sbjct: 266 TSFMSYTGGVLTNCVSDQLDHGVVLVGYNDSSNPPYWIIKNSWGADWGEE 315



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 87/157 (55%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG MD A  +I+  +NG V ++ +Y Y +   +       
Sbjct: 169 LTGLSEQMLVSCDNADNGCDGGLMDSAFDWIVGQNNGSVYTEASYSYVSGGGDSQTCNMS 228

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E++M  W+A  GPL++ ++A     Y+GGV+      C    
Sbjct: 229 SHVVGAVISGHVDLPQ-DEDKMAAWLAVNGPLAIAVDATSFMSYTGGVLTN----CVSDQ 283

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D ++ PYWI+KNSWG+DWGE+
Sbjct: 284 LDHGVVLVGY-----NDSSNPPYWIIKNSWGADWGEE 315



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 62/157 (39%), Gaps = 16/157 (10%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
            ++F  F + H KVY S  +   R   F  N+  A  +   +   A F V  F DL    
Sbjct: 35  ASQFAAFKQRHGKVYGSAAEEAFRLGVFKENLLFARLHAAANP-HASFGVTPFSDL---- 89

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                      T E+ +       +      +               P A DWRA G ++
Sbjct: 90  -----------TREEFRSRYHNAAAHFAAAQKRVRVPVEVEVEVGGAPAAVDWRARGAVT 138

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +K+QG C  CWAFS +G +E    + GN LT LS Q
Sbjct: 139 AIKDQGGCGSCWAFSTIGNIEGQWHLAGNPLTGLSEQ 175


>gi|403302734|ref|XP_003942008.1| PREDICTED: cathepsin K isoform 1 [Saimiri boliviensis boliviensis]
          Length = 329

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 148/300 (49%), Gaps = 41/300 (13%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS-GTAVF--GVNKFFDL-SESD 249
           EL  + H K Y+S  D + R   +  N++    +  E S G   F   +N   D+ SE  
Sbjct: 27  ELWKKTHRKQYTSKVDEISRRLIWEKNLKYISIHNLEASLGVHTFELAMNHLGDMTSEEV 86

Query: 250 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
           +Q++TGL + ++      +L  P      D E RA            P++ D+R +G ++
Sbjct: 87  VQKMTGLKVPTSFSRSNDTLYIP------DWEGRA------------PDSVDYRKKGYVT 128

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQY 369
            VK QG+C  CWAFS+VG +E     +   L  LS Q LVDC   N GC GG M +A QY
Sbjct: 129 PVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQY 188

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           +  N G+ S+ AYPY   E    C+     G   K + Y  IP G E+ +K+ VA  GP+
Sbjct: 189 VQKNRGIDSEDAYPYVGQEES--CMY-NPTGKAAKCRGYREIPEGNEKALKRAVARVGPI 245

Query: 430 SVGMNAN--GLFYYSGGVI--------DLNQRL----YGTSI--PYWIVKNSWGSDWGEK 473
           SV ++A+     +YS GV         +LN  +    YG      +WI+KNSWG +WG K
Sbjct: 246 SVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNK 305



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ + LVDC   N GC GG M +A QY+  N G+ S+ AYPY   E    C+    
Sbjct: 158 KLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEES--CMY-NP 214

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNPK 614
            G   K + Y  IP G E+ +K+ VA  GP+SV ++A+     +YS GV       CN  
Sbjct: 215 TGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGV--YYDESCNSD 272

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             NHA++ VGYG ++        +WI+KNSWG +WG K
Sbjct: 273 NLNHAVLAVGYGIQKGNK-----HWIIKNSWGENWGNK 305



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 31/191 (16%)

Query: 13  GLGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTN 72
           GL  L   M+  AL    I  T   L         + + H K Y+S  D + R   +  N
Sbjct: 3   GLKVLLLPMVSFALYPEEILDTHWEL---------WKKTHRKQYTSKVDEISRRLIWEKN 53

Query: 73  VEKAEDYQREDS-GTAVFEV--NKFFDLSDSDL-QQLTGLNLDSTLEDIQPSLQAPFSSN 128
           ++    +  E S G   FE+  N   D++  ++ Q++TGL + ++      +L  P    
Sbjct: 54  LKYISIHNLEASLGVHTFELAMNHLGDMTSEEVVQKMTGLKVPTSFSRSNDTLYIP---- 109

Query: 129 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
             D E RA            P++ D+R +G ++ VK QG+C  CWAFS+VG +E     +
Sbjct: 110 --DWEGRA------------PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKK 155

Query: 189 GNNLTELSVQH 199
              L  LS Q+
Sbjct: 156 TGKLLNLSPQN 166


>gi|392922426|ref|NP_001256718.1| Protein CPL-1, isoform a [Caenorhabditis elegans]
 gi|3879367|emb|CAB07275.1| Protein CPL-1, isoform a [Caenorhabditis elegans]
          Length = 337

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/308 (35%), Positives = 152/308 (49%), Gaps = 49/308 (15%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS-GTAVF--GVNKFFDLSESDLQQLTG-- 255
           DK YS  E+     E FV N+   E++  +   G   F  G+N   DL  S  ++L G  
Sbjct: 40  DKEYSESEEQTYM-EAFVKNMIHIENHNRDHRLGRKTFEMGLNHIADLPFSQYRKLNGYR 98

Query: 256 -LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
            L  DS +++   S  APF+                     +P+  DWR   +++ VK Q
Sbjct: 99  RLFGDSRIKN-SSSFLAPFNVQ-------------------VPDEVDWRDTHLVTDVKNQ 138

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIID 372
           G C  CWAFSA G +E  HA +   L  LS Q LVDC     N GCNGG MD A +YI D
Sbjct: 139 GMCGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRD 198

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           N GV ++++YPYK  + +  C   ++       K Y   P G+EE++K  VAT+GP+S+ 
Sbjct: 199 NHGVDTEESYPYKGRDMK--CHFNKKT-VGADDKGYVDTPEGDEEQLKIAVATQGPISIA 255

Query: 433 MNA---------NGLFY---YSGGVIDLNQRL--YGTSIP---YWIVKNSWGSDWGEKVE 475
           ++A          G++Y    S   +D    L  YGT      YWIVKNSWG+ WGEK  
Sbjct: 256 IDAGHRSFQLYKKGVYYDEECSSEELDHGVLLVGYGTDPEHGDYWIVKNSWGAGWGEKGY 315

Query: 476 DKVGSSGN 483
            ++  + N
Sbjct: 316 IRIARNRN 323



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 91/160 (56%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           +L  L+ + LVDC     N GCNGG MD A +YI DN GV ++++YPYK  + +  C   
Sbjct: 163 QLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHGVDTEESYPYKGRDMK--CHFN 220

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
           ++       K Y   P G+EE++K  VAT+GP+S+ ++A    +  Y  GV       C+
Sbjct: 221 KKT-VGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGV--YYDEECS 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +++VGYG     D     YWIVKNSWG+ WGEK
Sbjct: 278 SEELDHGVLLVGYG----TDPEHGDYWIVKNSWGAGWGEK 313



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 27/167 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS-GTAVFE--VNKF 94
           + S + ++ ++  D DK YS  E+     E FV N+   E++ R+   G   FE  +N  
Sbjct: 25  IESAIEKWDDYKEDFDKEYSESEEQTYM-EAFVKNMIHIENHNRDHRLGRKTFEMGLNHI 83

Query: 95  FDLSDSDLQQLTG---LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEA 151
            DL  S  ++L G   L  DS +++   S  APF+                     +P+ 
Sbjct: 84  ADLPFSQYRKLNGYRRLFGDSRIKN-SSSFLAPFNVQ-------------------VPDE 123

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            DWR   +++ VK QG C  CWAFSA G +E  HA +   L  LS Q
Sbjct: 124 VDWRDTHLVTDVKNQGMCGSCWAFSATGALEGQHARKLGQLVSLSEQ 170


>gi|957281|gb|AAB33990.1| cysteine proteinase [Bombyx mori]
          Length = 344

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 112/196 (57%), Gaps = 22/196 (11%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--M 353
           LPE  DWR  G ++ +K+QGKC  CW+FS  G +E  H  Q   L  LS Q L+DC    
Sbjct: 127 LPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQY 186

Query: 354 SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY 413
            N GCNGG MD+A +YI DNGG+ ++QAYPY+  + +  C    +      V  +  IP 
Sbjct: 187 GNNGCNGGLMDNAFKYIKDNGGIDTEQAYPYEGVDDK--CRYNPKNTGAEDVG-FVDIPE 243

Query: 414 GEEEEMKKWVATRGPLSVGMNANGLFY--YSGGV--------IDLNQRL----YGT---S 456
           G+E+++ + VAT GP+SV ++A+   +  YS GV         DL+  +    YGT    
Sbjct: 244 GDEQKLMEAVATVGPVSVAIDASHTHFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQG 303

Query: 457 IPYWIVKNSWGSDWGE 472
           + YW+VKNSWG  WGE
Sbjct: 304 VDYWLVKNSWGRSWGE 319



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 95/158 (60%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ + L+DC     N GCNGG MD+A +YI DNGG+ ++QAYPY+  + +  C    
Sbjct: 171 LVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKYIKDNGGIDTEQAYPYEGVDDK--CRYNP 228

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNP 613
           +      V  +  IP G+E+++ + VAT GP+SV ++A+   +  YS GV   N+  C+ 
Sbjct: 229 KNTGAEDVG-FVDIPEGDEQKLMEAVATVGPVSVAIDASHTHFQLYSSGV--YNEEECSS 285

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              +H +++VGYG +E+     + YW+VKNSWG  WGE
Sbjct: 286 TDLDHGVLVVGYGTDEQ----GVDYWLVKNSWGRSWGE 319



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 30/51 (58%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LPE  DWR  G ++ +K+QGKC  CW+FS  G +E  H  Q   L  LS Q
Sbjct: 127 LPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQ 177


>gi|413953665|gb|AFW86314.1| hypothetical protein ZEAMMB73_546353 [Zea mays]
          Length = 233

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 119/205 (58%), Gaps = 23/205 (11%)

Query: 285 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELS 344
           F++ ++   D LP   DWR +G ++ +K+QG+C CCWAFSAV   E +  I    L  L+
Sbjct: 7   FRYENV-SADALPTTIDWRTKGAVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLVSLA 65

Query: 345 VQQLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 402
            Q+LVDCD+   + GC GG MDDA ++II NGG+ ++ +YPY A++ +  C  G      
Sbjct: 66  EQELVDCDVHDEDQGCEGGLMDDAFKFIIKNGGLTTESSYPYTAADGK--CKSGSNS--A 121

Query: 403 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVI------DLNQRL-- 452
             +K Y  +P  +E  + K VA + P+SV ++   +   +YSGGV+      DL+  +  
Sbjct: 122 ATIKGYEDVPANDEAALMKAVANQ-PVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAA 180

Query: 453 --YGTS---IPYWIVKNSWGSDWGE 472
             YG +     YW++KNSWG+ WGE
Sbjct: 181 IGYGKTSDGTKYWLMKNSWGTTWGE 205



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 17/163 (10%)

Query: 497 KLSRLATEKLVDCDM--SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  LA ++LVDCD+   + GC GG MDDA ++II NGG+ ++ +YPY A++ +  C  G
Sbjct: 60  KLVSLAEQELVDCDVHDEDQGCEGGLMDDAFKFIIKNGGLTTESSYPYTAADGK--CKSG 117

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
                   +K Y  +P  +E  + K VA + P+SV ++   +   +YSGGV+  +   C 
Sbjct: 118 SNS--AATIKGYEDVPANDEAALMKAVANQ-PVSVAVDGGDMTFQFYSGGVMTGS---CG 171

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
               +H +  +GYG+    DGT   YW++KNSWG+ WGE   L
Sbjct: 172 TDL-DHGIAAIGYGKTS--DGTK--YWLMKNSWGTTWGENGYL 209



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 137 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELS 196
           F++ ++   D LP   DWR +G ++ +K+QG+C CCWAFSAV   E +  I    L  L+
Sbjct: 7   FRYENV-SADALPTTIDWRTKGAVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLVSLA 65

Query: 197 VQH 199
            Q 
Sbjct: 66  EQE 68


>gi|449469923|ref|XP_004152668.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
 gi|449520697|ref|XP_004167370.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 371

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 143/302 (47%), Gaps = 55/302 (18%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTGLNLDS 260
           K Y++ E+   R   F  N+ KA+ +Q  D   AV GV +F DL+ES+ ++   GLN   
Sbjct: 67  KTYTTDEEHDYRFRVFKANLRKAKRHQKLDP-DAVHGVTRFSDLTESEFRENFVGLN--- 122

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACC 320
                   L+ P  ++Q            +   D+L   FDWR +G ++ VK+QG C  C
Sbjct: 123 -------RLRLPADAHQA----------PILPTDNLASDFDWRDQGAVTPVKDQGSCGSC 165

Query: 321 WAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNGGCNGGRMDDALQYII 371
           W+FSAVG +E  + +    L  LS QQLVDCD           + GCNGG M  A +YI+
Sbjct: 166 WSFSAVGALEGANFLSTGKLISLSEQQLVDCDHECDPEEAGACDAGCNGGLMTSAFEYIV 225

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
             GG+  ++ YPY    ++RG    +          +S I   + +++   +   GPL++
Sbjct: 226 KAGGLEREEDYPYTG--TDRGSCKFQNGKIAASAANFSVIS-NDADQIAANLVKNGPLAI 282

Query: 432 GMNANGLFYYSGGV----------IDLNQRLYGTSI-----------PYWIVKNSWGSDW 470
           G+NA  +  Y  G+          +D    L G              PYWI+KNSWG +W
Sbjct: 283 GINAVFMQTYMKGISCPYICSKRNLDHGVLLVGYGAAGFAPIRLKEKPYWIIKNSWGENW 342

Query: 471 GE 472
           GE
Sbjct: 343 GE 344



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 28/172 (16%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GCNGG M  A +YI+  GG+  ++ YPY    +
Sbjct: 184 KLISLSEQQLVDCDHECDPEEAGACDAGCNGGLMTSAFEYIVKAGGLEREEDYPYTG--T 241

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +RG    +          +S I   + +++   +   GPL++G+NA  +  Y  G+    
Sbjct: 242 DRGSCKFQNGKIAASAANFSVIS-NDADQIAANLVKNGPLAIGINAVFMQTYMKGIS--C 298

Query: 608 QRLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ +  +H +++VGYG         +EK      PYWI+KNSWG +WGE
Sbjct: 299 PYICSKRNLDHGVLLVGYGAAGFAPIRLKEK------PYWIIKNSWGENWGE 344



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 25/168 (14%)

Query: 36  GYLNSPVT---RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVN 92
           G  + P+T    F +F     K Y++ E+   R   F  N+ KA+ +Q+ D   AV  V 
Sbjct: 46  GADDRPLTAEQHFQDFKLKFGKTYTTDEEHDYRFRVFKANLRKAKRHQKLDP-DAVHGVT 104

Query: 93  KFFDLSDSDLQQ-LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEA 151
           +F DL++S+ ++   GLN           L+ P  ++Q            +   D+L   
Sbjct: 105 RFSDLTESEFRENFVGLN----------RLRLPADAHQA----------PILPTDNLASD 144

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           FDWR +G ++ VK+QG C  CW+FSAVG +E  + +    L  LS Q 
Sbjct: 145 FDWRDQGAVTPVKDQGSCGSCWSFSAVGALEGANFLSTGKLISLSEQQ 192


>gi|158268253|gb|ABW25046.1| cathepsin L-like protease [Strongylus vulgaris]
          Length = 354

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 144/285 (50%), Gaps = 48/285 (16%)

Query: 215 ENFVTNVEKAEDYQSEDS-GTAVF--GVNKFFDLSESDLQQLTGL----NLDSTLEDIQP 267
           E FV NV   +++  E   G   F  G+N   DL  S  ++L G     N   +++    
Sbjct: 68  EAFVKNVIHIDEHNQEHRLGRKTFEMGLNSIADLPFSQYRKLNGYRHRRNFGDSMQSNGT 127

Query: 268 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 327
              APF+                    ++P++ DWR +G+++ VK QG C  CWAFSA G
Sbjct: 128 KWLAPFNV-------------------EIPDSVDWRDKGLVTDVKNQGMCGSCWAFSATG 168

Query: 328 VVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 385
            +E  HA     +  LS Q LVDC     N GCNGG MD A +YI DN G+ ++++YPY 
Sbjct: 169 ALEGQHARASGKMVSLSEQNLVDCSTKYGNHGCNGGLMDLAFEYIKDNHGIDTEESYPYV 228

Query: 386 ASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA---------N 436
             E++  C   +++    + K +  +P G+EE +K  VAT+GP+S+ ++A          
Sbjct: 229 GRETK--CHFKKKD-IGAEDKGFVDLPEGDEEALKVAVATQGPISIAIDAGHRTFQLYKK 285

Query: 437 GLFY---YSGGVIDLNQRL--YGT---SIPYWIVKNSWGSDWGEK 473
           G++Y    S   +D    L  YGT   +  YW++KNSWG  WGEK
Sbjct: 286 GVYYDEECSSEELDHGVLLVGYGTDPEAGDYWLIKNSWGPGWGEK 330



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 93/160 (58%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           K+  L+ + LVDC     N GCNGG MD A +YI DN G+ ++++YPY   E++  C   
Sbjct: 180 KMVSLSEQNLVDCSTKYGNHGCNGGLMDLAFEYIKDNHGIDTEESYPYVGRETK--CHFK 237

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
           +++    + K +  +P G+EE +K  VAT+GP+S+ ++A    +  Y  GV       C+
Sbjct: 238 KKD-IGAEDKGFVDLPEGDEEALKVAVATQGPISIAIDAGHRTFQLYKKGV--YYDEECS 294

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +++VGYG     D  +  YW++KNSWG  WGEK
Sbjct: 295 SEELDHGVLLVGYG----TDPEAGDYWLIKNSWGPGWGEK 330



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 26/139 (18%)

Query: 67  ENFVTNVEKAEDYQREDS-GTAVFE--VNKFFDLSDSDLQQLTGL----NLDSTLEDIQP 119
           E FV NV   +++ +E   G   FE  +N   DL  S  ++L G     N   +++    
Sbjct: 68  EAFVKNVIHIDEHNQEHRLGRKTFEMGLNSIADLPFSQYRKLNGYRHRRNFGDSMQSNGT 127

Query: 120 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 179
              APF+                    ++P++ DWR +G+++ VK QG C  CWAFSA G
Sbjct: 128 KWLAPFNV-------------------EIPDSVDWRDKGLVTDVKNQGMCGSCWAFSATG 168

Query: 180 VVEAMHAIQGNNLTELSVQ 198
            +E  HA     +  LS Q
Sbjct: 169 ALEGQHARASGKMVSLSEQ 187


>gi|146215992|gb|ABQ10198.1| actinidin Act4b [Actinidia eriantha]
          Length = 379

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 155/304 (50%), Gaps = 44/304 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL-TGLNL 258
           + K Y+++ +  RR E F  N+   +++ ++ + +   G+N+F DL+  +   +  G   
Sbjct: 55  YGKSYNALGEKERRFEIFKDNLRFVDEHNADVNRSYKVGLNQFSDLTLEEYSSIYLGTKF 114

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
           D  + ++    +                    R GD LP + DWR +G +  VK QG C 
Sbjct: 115 DMRMTNVSDRYEP-------------------RVGDQLPNSIDWRKKGAVLGVKNQGNCG 155

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGV 376
            CW F+ +  VEA++ I   +L  LS QQ+VDC     N GC GG    A Q+IIDNGG+
Sbjct: 156 SCWTFAPIAAVEAINQIVTGNLISLSEQQIVDCQRKSPNNGCKGGSRAGAYQFIIDNGGI 215

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  YPYKA + E  C   + + + V +  Y  +P   E+ ++K V+ +  +SVG+ +N
Sbjct: 216 NTEANYPYKAQDGE--CDEQKNQKY-VTIDRYENVPRKNEKALQKAVSNQ-LVSVGIASN 271

Query: 437 ---------GLFY-YSGGVIDLNQRL--YGT--SIPYWIVKNSWGSDWGE----KVEDKV 478
                    G+F    G  ID    +  YGT   + YWIV+NSWGS+WGE    +++  V
Sbjct: 272 SSEFKAYKSGIFTGPCGAKIDHAVTIVGYGTEGGMDYWIVRNSWGSNWGENGYVRMQRNV 331

Query: 479 GSSG 482
           G++G
Sbjct: 332 GNAG 335



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 17/166 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +  ++   L  L+ +++VDC     N GC GG    A Q+IIDNGG+ ++  YPYKA + 
Sbjct: 169 INQIVTGNLISLSEQQIVDCQRKSPNNGCKGGSRAGAYQFIIDNGGINTEANYPYKAQDG 228

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID 605
           E  C   + + + V +  Y  +P   E+ ++K V+ +  +SVG+ +N   +  Y  G+  
Sbjct: 229 E--CDEQKNQKY-VTIDRYENVPRKNEKALQKAVSNQ-LVSVGIASNSSEFKAYKSGIF- 283

Query: 606 LNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                C  K  +HA+ IVGYG E   D     YWIV+NSWGS+WGE
Sbjct: 284 --TGPCGAKI-DHAVTIVGYGTEGGMD-----YWIVRNSWGSNWGE 321



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 20/156 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F +++ ++ K Y+++ +  RR E F  N+   +++  + + +    +N+F DL+  +   
Sbjct: 48  FESWLVEYGKSYNALGEKERRFEIFKDNLRFVDEHNADVNRSYKVGLNQFSDLTLEEYSS 107

Query: 105 L-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +  G   D  + ++    +                    R GD LP + DWR +G +  V
Sbjct: 108 IYLGTKFDMRMTNVSDRYEP-------------------RVGDQLPNSIDWRKKGAVLGV 148

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CW F+ +  VEA++ I   NL  LS Q 
Sbjct: 149 KNQGNCGSCWTFAPIAAVEAINQIVTGNLISLSEQQ 184


>gi|410493601|ref|YP_006908539.1| V-CATH [Epinotia aporema granulovirus]
 gi|354805035|gb|AER41457.1| V-CATH [Epinotia aporema granulovirus]
          Length = 329

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 158/306 (51%), Gaps = 39/306 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  ++KVY++ E+   ++E F  N+    +  S+ +  A++ +N+  DL++++L + TG 
Sbjct: 32  VIKYNKVYATDEERAAKYEIFRNNLVVINEKNSK-TTNALYDINRLSDLNKNELLRSTGF 90

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           +++   +++ PS +  +     D   R+           LP +FDWRA   ++ VK Q  
Sbjct: 91  SVNLK-KNLNPSKECEYVL-VADAPSRS-----------LPASFDWRANNAVTPVKNQLD 137

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNG 374
           C  CWAFS +  +E+++AI+     +L+ Q L++CD +N  CNGG M  AL+ I+  DNG
Sbjct: 138 CGSCWAFSTIANIESLYAIKYGVEVDLAEQYLLNCDYTNNNCNGGLMHWALENILINDNG 197

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           GVV ++  PY    +   C   ++E +   +    R     E  +++ +   GP+SV ++
Sbjct: 198 GVVEERHAPYVGEVT--AC---DKEEYLFTITNCKRFNLVNEHTLQQLLIENGPISVAID 252

Query: 435 ANGLFYYSGGVID-------LNQRL----YGTS---IPYWIVKNSWGSDWGE----KVED 476
              +  Y  G+ D       LN  +    YG S   IPYW+ KNSWG DWGE    +V  
Sbjct: 253 VFDILDYKQGISDNCRSDNGLNHAVLLVGYGVSINGIPYWVFKNSWGDDWGEQGFFRVRR 312

Query: 477 KVGSSG 482
            + S G
Sbjct: 313 DINSCG 318



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 14/154 (9%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEG 558
           LA + L++CD +N  CNGG M  AL+ I+  DNGGVV ++  PY    +   C   ++E 
Sbjct: 164 LAEQYLLNCDYTNNNCNGGLMHWALENILINDNGGVVEERHAPYVGEVT--AC---DKEE 218

Query: 559 FKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNH 618
           +   +    R     E  +++ +   GP+SV ++   +  Y  G+ D N R  +    NH
Sbjct: 219 YLFTITNCKRFNLVNEHTLQQLLIENGPISVAIDVFDILDYKQGISD-NCR--SDNGLNH 275

Query: 619 ALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           A+++VGYG         IPYW+ KNSWG DWGE+
Sbjct: 276 AVLLVGYGVSIN----GIPYWVFKNSWGDDWGEQ 305



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 90/172 (52%), Gaps = 15/172 (8%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA 76
           +  +++ +  L  N F     LN+    F +F+  ++KVY++ E+   ++E F  N+   
Sbjct: 1   MSNYILILLCLVCNSFAIYD-LNNSQALFDDFVIKYNKVYATDEERAAKYEIFRNNLVVI 59

Query: 77  EDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRA 136
            + +   +  A++++N+  DL+ ++L + TG +++   +++ PS +  +     D   R+
Sbjct: 60  NE-KNSKTTNALYDINRLSDLNKNELLRSTGFSVNLK-KNLNPSKECEYVL-VADAPSRS 116

Query: 137 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
                      LP +FDWRA   ++ VK Q  C  CWAFS +  +E+++AI+
Sbjct: 117 -----------LPASFDWRANNAVTPVKNQLDCGSCWAFSTIANIESLYAIK 157


>gi|363807062|ref|NP_001242584.1| uncharacterized protein LOC100804015 precursor [Glycine max]
 gi|255640677|gb|ACU20623.1| unknown [Glycine max]
          Length = 366

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 148/295 (50%), Gaps = 43/295 (14%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            H K Y+ +    +R + F  N+   +++ +  + T   G+NKF D++  + +       
Sbjct: 44  RHQKGYNELGKKDKRFQVFKDNLGFIQEHNNNLNNTYKLGLNKFADMTNEEYR------- 96

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG------DDLPEAFDWRAEGVISKVK 312
                       A +   +++ + R  +  S  H       D LP   DWR +G ++ +K
Sbjct: 97  ------------AMYLGTKSNAKRRLMKTKSTGHRYAFSARDRLPVHVDWRMKGAVAPIK 144

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYII 371
           +QG C  CWAFS V  VEA++ I       LS Q+LVDCD + N GCNGG MD A ++II
Sbjct: 145 DQGSCGSCWAFSTVATVEAINKIVTGKFVSLSEQELVDCDRAYNEGCNGGLMDYAFEFII 204

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
            NGG+ +D+ YPY+  +    C   ++    V +  Y  +P  +E  +KK VA + P+SV
Sbjct: 205 QNGGIDTDKDYPYRGFDGI--CDPTKKNAKVVNIDGYEDVPPYDENALKKAVAHQ-PVSV 261

Query: 432 GMNANG--LFYYSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            + A+G  L  Y  GV        L+  +    YG+   + YW+V+NSWG+ WGE
Sbjct: 262 AIEASGRALQLYQSGVFTGKCGTSLDHGVVVVGYGSENGVDYWLVRNSWGTGWGE 316



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  K   L+ ++LVDCD + N GCNGG MD A ++II NGG+ +D+ YPY+  +  
Sbjct: 164 INKIVTGKFVSLSEQELVDCDRAYNEGCNGGLMDYAFEFIIQNGGIDTDKDYPYRGFDGI 223

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDL 606
             C   ++    V +  Y  +P  +E  +KK VA + P+SV + A+G  L  Y  GV   
Sbjct: 224 --CDPTKKNAKVVNIDGYEDVPPYDENALKKAVAHQ-PVSVAIEASGRALQLYQSGVFTG 280

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C   + +H +++VGYG E   D     YW+V+NSWG+ WGE
Sbjct: 281 K---CGT-SLDHGVVVVGYGSENGVD-----YWLVRNSWGTGWGE 316



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 27/186 (14%)

Query: 19  TFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAED 78
           +F +  A+  S I       N  +  +  ++  H K Y+ +    +R + F  N+   ++
Sbjct: 14  SFTLSYAIKTSTIINYTD--NEVMAMYEEWLVRHQKGYNELGKKDKRFQVFKDNLGFIQE 71

Query: 79  YQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
           +    + T    +NKF D+++ + +                   A +   +++ + R  +
Sbjct: 72  HNNNLNNTYKLGLNKFADMTNEEYR-------------------AMYLGTKSNAKRRLMK 112

Query: 139 FNSLRHG------DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNL 192
             S  H       D LP   DWR +G ++ +K+QG C  CWAFS V  VEA++ I     
Sbjct: 113 TKSTGHRYAFSARDRLPVHVDWRMKGAVAPIKDQGSCGSCWAFSTVATVEAINKIVTGKF 172

Query: 193 TELSVQ 198
             LS Q
Sbjct: 173 VSLSEQ 178


>gi|356560855|ref|XP_003548702.1| PREDICTED: P34 probable thiol protease-like [Glycine max]
          Length = 357

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 148/333 (44%), Gaps = 52/333 (15%)

Query: 169 CACCWAFSAVGVVEAMHAIQGNNLTELSVQ------------HHDKVYSSVEDLLRRHEN 216
           C     FS+       ++I G NL +L  Q             H  VY  ++++ +R E 
Sbjct: 16  CITLICFSSSSNFPVQYSILGPNLDKLPSQDETIQLFQLWRKEHGLVYKDLKEMAKRFEI 75

Query: 217 FVTNVEKAEDYQSEDSGTA--VFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFS 274
           F++N+    ++ ++ S  +  + G+N F D S S+ Q++   +LD    D  P L  P  
Sbjct: 76  FLSNLNYIIEFNAKRSSPSGYLLGLNNFADWSPSEFQEIYLHSLDMP-TDSAPKLNGPLL 134

Query: 275 SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHA 334
           S                     P + DWR +  ++ +K QG C  CWAFSA G +E +HA
Sbjct: 135 SCIA------------------PASLDWRNKVAVTAIKNQGSCGSCWAFSAAGAIEGIHA 176

Query: 335 IQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 394
           I    L  LS Q+LV+CD  + GCNGG ++ A  ++I NGG+  +  YPY   +    C 
Sbjct: 177 ITTGELISLSEQELVNCDRVSKGCNGGWVNKAFDWVISNGGITLEAEYPYTGKDGGN-CN 235

Query: 395 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLYG 454
             ++   K  +  Y ++   +   +   V  + P+S+ +NA     Y  G+ D  Q    
Sbjct: 236 SDKQVPIKATIDGYEQVEQSDNGLLCSIV--KQPISICLNATDFQLYESGIFDGQQCSSS 293

Query: 455 TSIP----------------YWIVKNSWGSDWG 471
           +                   YWIVKNSWG+ WG
Sbjct: 294 SKYTNHCVLIVGYDSSNGEDYWIVKNSWGTKWG 326



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 8/161 (4%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  +   +L  L+ ++LV+CD  + GCNGG ++ A  ++I NGG+  +  YPY   +   
Sbjct: 174 IHAITTGELISLSEQELVNCDRVSKGCNGGWVNKAFDWVISNGGITLEAEYPYTGKDGGN 233

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C   ++   K  +  Y ++   +   +   V  + P+S+ +NA     Y  G+ D  Q 
Sbjct: 234 -CNSDKQVPIKATIDGYEQVEQSDNGLLCSIV--KQPISICLNATDFQLYESGIFDGQQC 290

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
             + K  NH ++IVGY     +D     YWIVKNSWG+ WG
Sbjct: 291 SSSSKYTNHCVLIVGYDSSNGED-----YWIVKNSWGTKWG 326



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 21/159 (13%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDY--QREDSGTAVFEVNKFFDLSD 99
           +  F  + ++H  VY  ++++ +R E F++N+    ++  +R      +  +N F D S 
Sbjct: 49  IQLFQLWRKEHGLVYKDLKEMAKRFEIFLSNLNYIIEFNAKRSSPSGYLLGLNNFADWSP 108

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGV 159
           S+ Q++   +LD    D  P L  P  S                     P + DWR +  
Sbjct: 109 SEFQEIYLHSLDMP-TDSAPKLNGPLLSCIA------------------PASLDWRNKVA 149

Query: 160 ISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++ +K QG C  CWAFSA G +E +HAI    L  LS Q
Sbjct: 150 VTAIKNQGSCGSCWAFSAAGAIEGIHAITTGELISLSEQ 188


>gi|223049408|gb|ACM80348.1| cysteine proteinase [Solanum lycopersicum]
          Length = 368

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 148/320 (46%), Gaps = 52/320 (16%)

Query: 182 EAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNK 241
           E  H +   +   L  +   K Y+S E+   R   F  N+ +A  +Q  D  +AV GV +
Sbjct: 43  EDHHMLNAEHHFTLFKKRFGKTYASDEEHHYRFSVFKANLRRAMRHQKLDP-SAVHGVTQ 101

Query: 242 FFDLSESDL-QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAF 300
           F D++  +  Q+  G+N           L+ P  +N+            +   +DLP  F
Sbjct: 102 FSDMTPDEFSQKFLGVNR---------RLRFPSDANKA----------PILPTEDLPSDF 142

Query: 301 DWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM------- 353
           DWR  G ++ VK QG C  CW+FS  G +E  + +    L  LS QQLVDCD        
Sbjct: 143 DWREHGAVTPVKNQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEK 202

Query: 354 --SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI 411
              + GC+GG M+ A +Y +  GG++ ++ YPY    +++     +      KV  +S +
Sbjct: 203 DSCDSGCSGGLMNSAFEYTLKAGGLMREEDYPYTG--TDKATCKFDNTKVAAKVANFSVV 260

Query: 412 PYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV---------IDLNQRL--YGTSI--- 457
              +EE++   +   GPL+V +NA  +  Y GGV         +D    L  YGT     
Sbjct: 261 SL-DEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICSKQLDHGVLLVGYGTGFSPI 319

Query: 458 -----PYWIVKNSWGSDWGE 472
                PYWI+KNSWG  WGE
Sbjct: 320 RMKEKPYWIIKNSWGEKWGE 339



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 109/224 (48%), Gaps = 44/224 (19%)

Query: 447 DLNQRLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS-KLSRLAT 503
           D + R +G   P   VKN  S GS W          S + T  LE    L + KL  L+ 
Sbjct: 141 DFDWREHGAVTP---VKNQGSCGSCW----------SFSTTGALEGANFLATGKLVSLSE 187

Query: 504 EKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           ++LVDCD           + GC+GG M+ A +Y +  GG++ ++ YPY    +++     
Sbjct: 188 QQLVDCDHECDPEEKDSCDSGCSGGLMNSAFEYTLKAGGLMREEDYPYTG--TDKATCKF 245

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           +      KV  +S +   +EE++   +   GPL+V +NA  +  Y GGV      +C+ K
Sbjct: 246 DNTKVAAKVANFSVVSL-DEEQIAANLVKNGPLAVAINAVFMQTYVGGVS--CPYICS-K 301

Query: 615 AQNHALIIVGYGE-------EEKKDGTSIPYWIVKNSWGSDWGE 651
             +H +++VGYG        +EK      PYWI+KNSWG  WGE
Sbjct: 302 QLDHGVLLVGYGTGFSPIRMKEK------PYWIIKNSWGEKWGE 339



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 21/156 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL- 102
            F  F +   K Y+S E+   R   F  N+ +A  +Q+ D  +AV  V +F D++  +  
Sbjct: 53  HFTLFKKRFGKTYASDEEHHYRFSVFKANLRRAMRHQKLDP-SAVHGVTQFSDMTPDEFS 111

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           Q+  G+N           L+ P  +N+            +   +DLP  FDWR  G ++ 
Sbjct: 112 QKFLGVNR---------RLRFPSDANKA----------PILPTEDLPSDFDWREHGAVTP 152

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CW+FS  G +E  + +    L  LS Q
Sbjct: 153 VKNQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQ 188


>gi|334347644|ref|XP_001379528.2| PREDICTED: cathepsin W-like [Monodelphis domestica]
          Length = 619

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 161/340 (47%), Gaps = 45/340 (13%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNL 258
            ++K Y+   +  RR E F  N+  A+    +  G A FGV +F DL+E +  Q      
Sbjct: 272 QYNKSYADPAEQERRFEIFADNLAWAQQLTEKHGGMAQFGVTQFSDLTEEEFHQ------ 325

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                  QP+      S+  +  ++  +   L+    L  + DWR  GV++ V++Q KC 
Sbjct: 326 -----HYQPA-----QSSYKEPSLKTRKHPRLQR--PLIRSCDWRKAGVLTPVRKQKKCR 373

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
            CWA +AVG VEA+ AI      ELSVQ+++DCD     C GG + DA   I+   G+  
Sbjct: 374 SCWAIAAVGNVEALWAIHYEQHFELSVQEVLDCDRCGKACKGGFVWDAFLTILRQRGLAR 433

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL 438
           ++ YPY+   S +GC   +++     ++++  +P  EE  M + +A +GP++V +N   L
Sbjct: 434 ERDYPYQDQLSRKGCQ--KKQNRTGWIQDFLMLPK-EENAMAEHLALKGPITVTINQALL 490

Query: 439 FYYSGGVI------DLNQRLYGTSI----------PYWIVKNSWGSDWGEKVEDKVGSSG 482
             Y  GVI      D NQ  +   +           YWI+KNSWGSDWGE+   ++    
Sbjct: 491 KTYRKGVIRPKDDCDPNQVDHSVLLVGFGQNTKDGAYWILKNSWGSDWGEEGYFRL---- 546

Query: 483 NRTRDLELTGVL--PSKLSRLATEKLVDCDMSNGGCNGGR 520
              R     G+   P     L T KL   D  N    GGR
Sbjct: 547 --RRGTNACGITKYPVTALELNTIKLWAHDFRNDLAEGGR 584



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 89/152 (58%), Gaps = 8/152 (5%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ ++++DCD     C GG + DA   I+   G+  ++ YPY+   S +GC   +++   
Sbjct: 398 LSVQEVLDCDRCGKACKGGFVWDAFLTILRQRGLARERDYPYQDQLSRKGCQ--KKQNRT 455

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
             ++++  +P  EE  M + +A +GP++V +N   L  Y  GVI      C+P   +H++
Sbjct: 456 GWIQDFLMLPK-EENAMAEHLALKGPITVTINQALLKTYRKGVIRPKDD-CDPNQVDHSV 513

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           ++VG+G +  KDG    YWI+KNSWGSDWGE+
Sbjct: 514 LLVGFG-QNTKDGA---YWILKNSWGSDWGEE 541



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F   ++K Y+   +  RR E F  N+  A+    +  G A F V +F DL++ +  
Sbjct: 265 QFKAFQIQYNKSYADPAEQERRFEIFADNLAWAQQLTEKHGGMAQFGVTQFSDLTEEEFH 324

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           Q             QP+      S+  +  ++  +   L+    L  + DWR  GV++ V
Sbjct: 325 Q-----------HYQPA-----QSSYKEPSLKTRKHPRLQR--PLIRSCDWRKAGVLTPV 366

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++Q KC  CWA +AVG VEA+ AI      ELSVQ
Sbjct: 367 RKQKKCRSCWAIAAVGNVEALWAIHYEQHFELSVQ 401


>gi|297816028|ref|XP_002875897.1| hypothetical protein ARALYDRAFT_347926 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321735|gb|EFH52156.1| hypothetical protein ARALYDRAFT_347926 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 361

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 161/320 (50%), Gaps = 37/320 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTGLNL 258
           H  V  S+ +  +R   F  NV    +   ++  +    +NKF DL+  + +   TG  +
Sbjct: 44  HHSVPRSLHEREKRFNVFRHNVMHVHNSNKKNR-SYKLKLNKFADLTIHEFKNAYTGSKI 102

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
                     LQ P   +      + F ++   +   LP + DWR +G ++++K QGKC 
Sbjct: 103 KH-----HRMLQGPKRGS------KQFMYDH-ENVSKLPSSVDWRKKGAVTEIKNQGKCG 150

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGGVV 377
            CWAFS V  VE ++ I+ N L  LS Q+LVDCD + N GCNGG M+ A ++I  NGG+ 
Sbjct: 151 SCWAFSTVAAVEGINKIKTNKLVSLSEQELVDCDTNQNEGCNGGLMEIAFEFIKKNGGIT 210

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++ +YPY+  + +  C   ++ G  V +  +  +P  +E  + K VA + P+SV ++A  
Sbjct: 211 TEDSYPYEGIDGK--CDASKDNGVLVTIDGHENVPENDENALLKAVANQ-PVSVAIDAGS 267

Query: 438 --LFYYSGGVI------DLNQRL----YGTS--IPYWIVKNSWGSDWGE----KVEDKVG 479
               +YS GV       +LN  +    YG+     YWIV+NSWG++WGE    K+E  + 
Sbjct: 268 SDFQFYSEGVFTGDCGTELNHGVATVGYGSQGGKKYWIVRNSWGTEWGEGGYIKIERGID 327

Query: 480 SSGNRTRDLELTGVLPSKLS 499
               R   + +    P KLS
Sbjct: 328 EPEGRC-GIAMEASYPIKLS 346



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 19/167 (11%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +  +KL  L+ ++LVDCD + N GCNGG M+ A ++I  NGG+ ++ +YPY+  + +
Sbjct: 164 INKIKTNKLVSLSEQELVDCDTNQNEGCNGGLMEIAFEFIKKNGGITTEDSYPYEGIDGK 223

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI-- 604
             C   ++ G  V +  +  +P  +E  + K VA + P+SV ++A      +YS GV   
Sbjct: 224 --CDASKDNGVLVTIDGHENVPENDENALLKAVANQ-PVSVAIDAGSSDFQFYSEGVFTG 280

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           D    L      NH +  VGYG +  K      YWIV+NSWG++WGE
Sbjct: 281 DCGTEL------NHGVATVGYGSQGGK-----KYWIVRNSWGTEWGE 316



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 14/158 (8%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           +++  +  R H  V  S+ +  +R   F  NV    +  +++  +   ++NKF DL+  +
Sbjct: 34  LSKLYDRWRSHHSVPRSLHEREKRFNVFRHNVMHVHNSNKKNR-SYKLKLNKFADLTIHE 92

Query: 102 LQQ-LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
            +   TG  +          LQ P   +      + F ++   +   LP + DWR +G +
Sbjct: 93  FKNAYTGSKIKH-----HRMLQGPKRGS------KQFMYDH-ENVSKLPSSVDWRKKGAV 140

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +++K QGKC  CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 141 TEIKNQGKCGSCWAFSTVAAVEGINKIKTNKLVSLSEQ 178


>gi|326520387|dbj|BAK07452.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 349

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 143/303 (47%), Gaps = 38/303 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS-ESDLQQLTGLNL 258
           H++ Y S E+ LRR E + TNVE  +        T   G N+F DL+ E  L +  G + 
Sbjct: 52  HNRSYLSAEERLRRFEVYRTNVEYIDATNRRGGLTYELGENQFADLTGEEFLARYAGGHT 111

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG-KC 317
            S +     +    +SS  +D  + A          D P + DWRA+G ++ VK QG +C
Sbjct: 112 GSAITTAAEA-DGLWSSGGSDGSLEA----------DPPASVDWRAKGAVTPVKNQGSQC 160

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
             CWAFSAV  +E+++ I+   L  LS QQLVDCD  +GGCN G    A Q+I++NGG+ 
Sbjct: 161 YSCWAFSAVATMESLYFIKTGKLVALSEQQLVDCDKYDGGCNKGYYHRAFQWIMENGGIT 220

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA-- 435
           +   YPYKA       + G     K  V     +   + E   +    R P+ V +    
Sbjct: 221 TAAQYPYKA-------VRGACSAAKPAVTITGHLAVAKNELALQSAVARQPIGVAIEVPI 273

Query: 436 NGLFYYSG------------GVIDLNQRLYGTSIPYWIVKNSWGSDWGE----KVEDKVG 479
           +  FY SG             V+ +      + + YW+VKNSWG  WGE    ++   VG
Sbjct: 274 SMQFYKSGVFSAACGIQMSHAVVTVGYGADASGLKYWLVKNSWGQTWGEAGYIRMRRDVG 333

Query: 480 SSG 482
             G
Sbjct: 334 GGG 336



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 16/156 (10%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  +GGCN G    A Q+I++NGG+ +   YPYKA       + G  
Sbjct: 182 KLVALSEQQLVDCDKYDGGCNKGYYHRAFQWIMENGGITTAAQYPYKA-------VRGAC 234

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN-GLFYYSGGVIDLNQRLCNPKA 615
              K  V     +   + E   +    R P+ V +     + +Y  GV       C  + 
Sbjct: 235 SAAKPAVTITGHLAVAKNELALQSAVARQPIGVAIEVPISMQFYKSGVFSAA---CGIQ- 290

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +HA++ VGYG     D + + YW+VKNSWG  WGE
Sbjct: 291 MSHAVVTVGYG----ADASGLKYWLVKNSWGQTWGE 322



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 13/158 (8%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD-L 102
           RF  +   H++ Y S E+ LRR E + TNVE  +   R    T     N+F DL+  + L
Sbjct: 44  RFRQWQATHNRSYLSAEERLRRFEVYRTNVEYIDATNRRGGLTYELGENQFADLTGEEFL 103

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            +  G +  S +     +    +SS  +D  + A          D P + DWRA+G ++ 
Sbjct: 104 ARYAGGHTGSAITTAAEA-DGLWSSGGSDGSLEA----------DPPASVDWRAKGAVTP 152

Query: 163 VKEQG-KCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK QG +C  CWAFSAV  +E+++ I+   L  LS Q 
Sbjct: 153 VKNQGSQCYSCWAFSAVATMESLYFIKTGKLVALSEQQ 190


>gi|91992508|gb|ABE72970.1| cathepsin L [Aedes aegypti]
          Length = 339

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 152/298 (51%), Gaps = 40/298 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEK-AEDYQSEDSGTAVFG--VNKFFDL-SESDLQQLTG 255
           H K Y S  +   R + +V N  K A+  Q  D G   +   VNK+ DL  E  +Q + G
Sbjct: 34  HRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYADLLHEEFVQTVNG 93

Query: 256 LNLDSTLEDIQ-PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
            N   + + ++   ++ P +  +                 ++P   DWR +G ++ VK+Q
Sbjct: 94  FNRTDSKKSLKGVRIEEPVTFIEPANV-------------EVPTTVDWRKKGAVTPVKDQ 140

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIID 372
           G C  CW+FSA G +E  H  +   L  LS Q LVDC     N GCNGG MD A QYI D
Sbjct: 141 GHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCNGGMMDYAFQYIKD 200

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ ++++YPY+A +    C     +      K Y  IP G+EE +KK +AT GP+S+ 
Sbjct: 201 NGGIDTEKSYPYEAIDDT--CHF-NPKAVGATDKGYVDIPQGDEEALKKALATVGPVSIA 257

Query: 433 MNAN--GLFYYSGGVI--------DLNQRL----YGTSIP---YWIVKNSWGSDWGEK 473
           ++A+     +YS GV         +L+  +    YGTS     YW+VKNSWG+ WG++
Sbjct: 258 IDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQ 315



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 95/160 (59%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD A QYI DNGG+ ++++YPY+A +    C   
Sbjct: 165 KLVSLSEQNLVDCSGKYGNNGCNGGMMDYAFQYIKDNGGIDTEKSYPYEAIDDT--CHF- 221

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCN 612
             +      K Y  IP G+EE +KK +AT GP+S+ ++A+     +YS GV    Q  C+
Sbjct: 222 NPKAVGATDKGYVDIPQGDEEALKKALATVGPVSIAIDASHESFQFYSEGVYYEPQ--CD 279

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H ++ VGYG  E+ +     YW+VKNSWG+ WG++
Sbjct: 280 SENLDHGVLAVGYGTSEEGE----DYWLVKNSWGTTWGDQ 315



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 18/156 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEK-AEDYQREDSGTAVFE--VNKFFDLSDSD-LQ 103
           F   H K Y S  +   R + +V N  K A+  QR D G   +   VNK+ DL   + +Q
Sbjct: 30  FKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYADLLHEEFVQ 89

Query: 104 QLTGLNLDSTLEDIQ-PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            + G N   + + ++   ++ P +  +                 ++P   DWR +G ++ 
Sbjct: 90  TVNGFNRTDSKKSLKGVRIEEPVTFIEPANV-------------EVPTTVDWRKKGAVTP 136

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG C  CW+FSA G +E  H  +   L  LS Q
Sbjct: 137 VKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQ 172


>gi|356543116|ref|XP_003540009.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 337

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 138/292 (47%), Gaps = 38/292 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ + KVY    +  +R   F  NVE  E + +  +     G+N   D +  +      +
Sbjct: 42  MKKYGKVYKDAAEKQKRLLIFKDNVEFIESFNAAGNKPYKLGINHLADQTNEEF-----V 96

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              +  +      Q PF                      +P A DWR  G ++ VK+QG+
Sbjct: 97  ASHNGYKHKASHSQTPFKYENVT---------------GVPNAVDWRENGAVTAVKDQGQ 141

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS V   E ++ I  + L  LS Q+LVDCD  + GC+GG M+   ++II NGG+
Sbjct: 142 CGSCWAFSTVAATEGIYQITTSMLMSLSEQELVDCDSVDHGCDGGYMEGGFEFIIKNGGI 201

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            S+  YPY A +    C   +E     ++K Y  +P   E+ ++K VA + P+SV ++A 
Sbjct: 202 SSEANYPYTAVDGT--CDANKEASPAAQIKGYETVPANSEDALQKAVANQ-PVSVTIDAG 258

Query: 437 G--LFYYSGGVID----------LNQRLYGTS---IPYWIVKNSWGSDWGEK 473
           G    +YS GV            +    YG++     YWIVKNSWG+ WGE+
Sbjct: 259 GSAFQFYSSGVFTGQCGTQLDHGVTAVGYGSTDDGTQYWIVKNSWGTQWGEE 310



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 13/162 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +  S L  L+ ++LVDCD  + GC+GG M+   ++II NGG+ S+  YPY A +    C 
Sbjct: 160 ITTSMLMSLSEQELVDCDSVDHGCDGGYMEGGFEFIIKNGGISSEANYPYTAVDGT--CD 217

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRL 610
             +E     ++K Y  +P   E+ ++K VA + P+SV ++A G    +YS GV       
Sbjct: 218 ANKEASPAAQIKGYETVPANSEDALQKAVANQ-PVSVTIDAGGSAFQFYSSGVFTGQ--- 273

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           C  +  +H +  VGYG  +  DGT   YWIVKNSWG+ WGE+
Sbjct: 274 CGTQL-DHGVTAVGYGSTD--DGTQ--YWIVKNSWGTQWGEE 310



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 22/192 (11%)

Query: 7   VSLGEKGLGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRH 66
            S+G+K   ++   ++ +++  S +     +  S   R   +M+ + KVY    +  +R 
Sbjct: 2   ASIGKKQ--HILALVLLLSICTSQVMSRYLHEASMSERHEQWMKKYGKVYKDAAEKQKRL 59

Query: 67  ENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFS 126
             F  NVE  E +            NK + L  + L        D T E+   S      
Sbjct: 60  LIFKDNVEFIESFNAAG--------NKPYKLGINHL-------ADQTNEEFVASHNG--Y 102

Query: 127 SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHA 186
            ++       F++ ++     +P A DWR  G ++ VK+QG+C  CWAFS V   E ++ 
Sbjct: 103 KHKASHSQTPFKYENVT---GVPNAVDWRENGAVTAVKDQGQCGSCWAFSTVAATEGIYQ 159

Query: 187 IQGNNLTELSVQ 198
           I  + L  LS Q
Sbjct: 160 ITTSMLMSLSEQ 171


>gi|158268255|gb|ABW25047.1| cathepsin L-like protease [Strongylus vulgaris]
          Length = 354

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 144/285 (50%), Gaps = 48/285 (16%)

Query: 215 ENFVTNVEKAEDYQSEDS-GTAVF--GVNKFFDLSESDLQQLTGL----NLDSTLEDIQP 267
           E FV NV   +++  E   G   F  G+N   DL  S  ++L G     N   +++    
Sbjct: 68  EAFVKNVIHIDEHNQEHRLGRKTFEMGLNSIADLPFSQYRKLNGYRHRRNFGDSMQSNGT 127

Query: 268 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 327
              APF+                    ++P++ DWR +G+++ VK QG C  CWAFSA G
Sbjct: 128 KWLAPFNV-------------------EIPDSVDWRDKGLVTDVKNQGMCGSCWAFSATG 168

Query: 328 VVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 385
            +E  HA     +  LS Q LVDC     N GCNGG MD A +YI DN G+ ++++YPY 
Sbjct: 169 ALEGQHARASGKMVSLSEQNLVDCSTKYGNHGCNGGLMDLAFEYIKDNHGIDTEESYPYV 228

Query: 386 ASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA---------N 436
             E++  C   +++    + K +  +P G+EE +K  VAT+GP+S+ ++A          
Sbjct: 229 GRETK--CHFKKKD-IGAEDKGFVDLPEGDEEALKVAVATQGPISIAIDAGHRTFQLYKK 285

Query: 437 GLFY---YSGGVIDLNQRL--YGT---SIPYWIVKNSWGSDWGEK 473
           G++Y    S   +D    L  YGT   +  YW++KNSWG  WGEK
Sbjct: 286 GVYYDEECSSEELDHGVLLVGYGTDPEAGDYWLIKNSWGPGWGEK 330



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 93/160 (58%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           K+  L+ + LVDC     N GCNGG MD A +YI DN G+ ++++YPY   E++  C   
Sbjct: 180 KMVSLSEQNLVDCSTKYGNHGCNGGLMDLAFEYIKDNHGIDTEESYPYVGRETK--CHFK 237

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
           +++    + K +  +P G+EE +K  VAT+GP+S+ ++A    +  Y  GV       C+
Sbjct: 238 KKD-IGAEDKGFVDLPEGDEEALKVAVATQGPISIAIDAGHRTFQLYKKGV--YYDEECS 294

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +++VGYG     D  +  YW++KNSWG  WGEK
Sbjct: 295 SEELDHGVLLVGYG----TDPEAGDYWLIKNSWGPGWGEK 330



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 26/139 (18%)

Query: 67  ENFVTNVEKAEDYQREDS-GTAVFE--VNKFFDLSDSDLQQLTGL----NLDSTLEDIQP 119
           E FV NV   +++ +E   G   FE  +N   DL  S  ++L G     N   +++    
Sbjct: 68  EAFVKNVIHIDEHNQEHRLGRKTFEMGLNSIADLPFSQYRKLNGYRHRRNFGDSMQSNGT 127

Query: 120 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 179
              APF+                    ++P++ DWR +G+++ VK QG C  CWAFSA G
Sbjct: 128 KWLAPFNV-------------------EIPDSVDWRDKGLVTDVKNQGMCGSCWAFSATG 168

Query: 180 VVEAMHAIQGNNLTELSVQ 198
            +E  HA     +  LS Q
Sbjct: 169 ALEGQHARASGKMVSLSEQ 187


>gi|237637244|gb|ACR07922.1| cysteine proteinase [Trypanosoma cruzi]
          Length = 345

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 114/202 (56%), Gaps = 15/202 (7%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q LV CD ++ 
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDF 61

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           GC+GG M++A ++I+  +NG V ++ +YPY + E                +  +  +P  
Sbjct: 62  GCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ- 120

Query: 415 EEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----TSIPYWIV 462
           +E ++  W+A  GP++V ++A+    Y+GGV        +D    L G     ++PYWI+
Sbjct: 121 DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWII 180

Query: 463 KNSWGSDWGEKVEDKVGSSGNR 484
           KNSW + WGE+   ++    N+
Sbjct: 181 KNSWTTQWGEEGYIRIAKGSNQ 202



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 45  LTNLSEQMLVSCDKTDFGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 104

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 105 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 159

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D  ++PYWI+KNSW + WGE+
Sbjct: 160 LDHGVLLVGY-----NDSAAVPYWIIKNSWTTQWGEE 191



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 51


>gi|426216524|ref|XP_004002512.1| PREDICTED: cathepsin S isoform 1 [Ovis aries]
          Length = 331

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 115 LPDSLDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTVK 174

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M +A QYIIDN G+ S+ +YPYKA +   G    + +        Y  +P
Sbjct: 175 YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD---GRCQYDVKNRAATCSRYIELP 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI-------DLNQRL----YGT--SI 457
           +G EE +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG+    
Sbjct: 232 FGSEEALKEAVANKGPVSVGIDAKQTSFFLYKTGVYYDPSCTQNVNHGVLVVGYGSLNGK 291

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++G++
Sbjct: 292 DYWLVKNSWGLNFGDQ 307



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M +A QYIIDN G+ S+ +YPYKA +   G   
Sbjct: 158 KLVSLSAQNLVDCSTVKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD---GRCQ 214

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLC 611
            + +        Y  +P+G EE +K+ VA +GP+SVG++A     F Y  GV       C
Sbjct: 215 YDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDAKQTSFFLYKTGV--YYDPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG    KD     YW+VKNSWG ++G++
Sbjct: 273 TQNV-NHGVLVVGYGSLNGKD-----YWLVKNSWGLNFGDQ 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 115 LPDSLDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQN 166


>gi|57118009|gb|AAW34136.1| cysteine protease gp3a [Zingiber officinale]
          Length = 475

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 141/276 (51%), Gaps = 35/276 (12%)

Query: 213 RHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGLNLDSTLEDIQPSL 269
           R E F  N+   +++ +  D G   +  G+N+F DL+  + +          L D+  S 
Sbjct: 72  RLEVFKENLRFVDEHNAAADRGEHAYRLGMNRFADLTNEEYRA-------RFLRDL--SR 122

Query: 270 QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 329
               +S +   + R      LR GD LP++ DWR +G +  VK QG+C  CWAF+A+  V
Sbjct: 123 LGRSTSGEISNQYR------LREGDVLPDSIDWREKGAVVAVKNQGRCGSCWAFAAIAAV 176

Query: 330 EAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 389
           E ++ I    L  LS QQLVDC   N GC GG    A QYII+NGGV S++ YPY  +  
Sbjct: 177 EGINQIVTGDLISLSEQQLVDCSTRNYGCEGGWPYRAFQYIINNGGVNSEEHYPYTGTNG 236

Query: 390 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVI- 446
                  +E    V +  Y  +P  +E+ ++K  A + P+SVG++A+G  +  Y  G+  
Sbjct: 237 TC--NTTKENAHVVSIDSYRNVPSNDEKSLQKAAANQ-PISVGIDASGRNFQLYHSGIFT 293

Query: 447 -----DLNQRL----YGT--SIPYWIVKNSWGSDWG 471
                 LN  +    YGT     YWIVKNSWG +WG
Sbjct: 294 GSCNTSLNHGVTVVGYGTENGNDYWIVKNSWGENWG 329



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 89/164 (54%), Gaps = 16/164 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  ++   L  L+ ++LVDC   N GC GG    A QYII+NGGV S++ YPY  +    
Sbjct: 179 INQIVTGDLISLSEQQLVDCSTRNYGCEGGWPYRAFQYIINNGGVNSEEHYPYTGTNGTC 238

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDL 606
                +E    V +  Y  +P  +E+ ++K  A + P+SVG++A+G     Y+SG    +
Sbjct: 239 --NTTKENAHVVSIDSYRNVPSNDEKSLQKAAANQ-PISVGIDASGRNFQLYHSG----I 291

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
               CN  + NH + +VGYG E   D     YWIVKNSWG +WG
Sbjct: 292 FTGSCN-TSLNHGVTVVGYGTENGND-----YWIVKNSWGENWG 329



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)

Query: 142 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LR GD LP++ DWR +G +  VK QG+C  CWAF+A+  VE ++ I   +L  LS Q 
Sbjct: 137 LREGDVLPDSIDWREKGAVVAVKNQGRCGSCWAFAAIAAVEGINQIVTGDLISLSEQQ 194


>gi|148927394|gb|ABR19828.1| cysteine proteinase [Elaeis guineensis]
          Length = 469

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 150/292 (51%), Gaps = 34/292 (11%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTG 255
            H + Y+++++  +R E F  N+   + + +  ++G   F  G+ +F DL+  + +    
Sbjct: 53  QHARSYNALDEDEQRLEIFRDNLRFIDQHNAAANAGKYSFRLGLTRFADLTNEEYR---- 108

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
               ST   ++ +     S  + ++ + + ++   R  DDLP++ DWR +G +  VK+QG
Sbjct: 109 ----STYLGVRTA----GSRRRRNSTVGSNRYR-FRSSDDLPDSIDWRDKGAVVDVKDQG 159

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNG 374
            C  CWAFS +  VE ++ I    L  LS Q+LVDCD   N GCNGG MD A ++II NG
Sbjct: 160 SCGSCWAFSTIAAVEGINHIVTGDLISLSEQELVDCDTYYNQGCNGGLMDYAFEFIISNG 219

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ +D+ YPY   +    C    +    V +  Y  +P  +E+ ++K VA + P+SV + 
Sbjct: 220 GIDTDEDYPYTGRDGS--CDQYRKNAHVVTIDSYEDVPINDEKSLQKAVANQ-PVSVAIE 276

Query: 435 ANGLFY----------YSGGVIDLNQRLYGTSIP----YWIVKNSWGSDWGE 472
           A G  +          Y G  +D      G        YWIVKNSWGSDWGE
Sbjct: 277 AGGRAFQLYESGIFTGYCGTELDHGVTAIGYGSENGKYYWIVKNSWGSDWGE 328



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD   N GCNGG MD A ++II NGG+ +D+ YPY   +  
Sbjct: 176 INHIVTGDLISLSEQELVDCDTYYNQGCNGGLMDYAFEFIISNGGIDTDEDYPYTGRDGS 235

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P  +E+ ++K VA + P+SV + A G  +  Y  G+   
Sbjct: 236 --CDQYRKNAHVVTIDSYEDVPINDEKSLQKAVANQ-PVSVAIEAGGRAFQLYESGIF-- 290

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C  +  +H +  +GYG E  K      YWIVKNSWGSDWGE
Sbjct: 291 -TGYCGTEL-DHGVTAIGYGSENGK-----YYWIVKNSWGSDWGE 328



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 35/57 (61%)

Query: 142 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            R  DDLP++ DWR +G +  VK+QG C  CWAFS +  VE ++ I   +L  LS Q
Sbjct: 134 FRSSDDLPDSIDWRDKGAVVDVKDQGSCGSCWAFSTIAAVEGINHIVTGDLISLSEQ 190


>gi|8569514|pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq
 gi|9955113|pdb|1F29|A Chain A, Crystal Structure Analysis Of Cruzain Bound To A Vinyl
           Sulfone Derived Inhibitor (I)
 gi|9955114|pdb|1F29|B Chain B, Crystal Structure Analysis Of Cruzain Bound To A Vinyl
           Sulfone Derived Inhibitor (I)
 gi|9955115|pdb|1F29|C Chain C, Crystal Structure Analysis Of Cruzain Bound To A Vinyl
           Sulfone Derived Inhibitor (I)
 gi|9955116|pdb|1F2A|A Chain A, Crystal Structure Analysis Of Cruzain Bound To A Vinyl
           Sulfone Derived Inhibitor (Ii)
 gi|9955117|pdb|1F2B|A Chain A, Crystal Structure Analysis Of Cruzain Bound To Vinyl
           Sulfone Derived Inhibitor (Iii)
 gi|9955118|pdb|1F2C|A Chain A, Crystal Structure Analysis Of Cryzain Bound To Vinyl
           Sulfone Derived Inhibitor (Iv)
 gi|27573887|pdb|1ME3|A Chain A, High Resolution Crystal Structure Analysis Of Cruzain Non-
           Covalently Bound To A Hydroxymethyl Ketone Inhibitor
           (Ii)
 gi|27573888|pdb|1ME4|A Chain A, High Resolution Crystal Structure Analysis Of Cruzain
           Non-Covalently Bound To A Hydroxymethyl Ketone Inhibitor
           (I)
 gi|33356864|pdb|1EWL|A Chain A, Crystal Structure Of Cruzain Bound To Wrr-99
 gi|33356865|pdb|1EWM|A Chain A, The Cysteine Protease Cruzain Bound To Wrr-112
 gi|33356866|pdb|1EWO|A Chain A, The Cysteine Protease Cruzain Bound To Wrr-204
 gi|62738070|pdb|1U9Q|X Chain X, Crystal Structure Of Cruzain Bound To An Alpha-Ketoester
 gi|157834543|pdb|2AIM|A Chain A, Cruzain Inhibited With
           Benzoyl-Arginine-Alanine-Fluoromethylketone
 gi|168988657|pdb|2OZ2|A Chain A, Crystal Structure Analysis Of Cruzain Bound To Vinyl
           Sulfone Derived Inhibitor (K11777)
 gi|168988658|pdb|2OZ2|C Chain C, Crystal Structure Analysis Of Cruzain Bound To Vinyl
           Sulfone Derived Inhibitor (K11777)
 gi|281307097|pdb|3I06|A Chain A, Crystal Structure Of Cruzain Covalently Bound To A Purine
           Nitrile
 gi|300193186|pdb|3KKU|A Chain A, Cruzain In Complex With A Non-Covalent Ligand
 gi|309319934|pdb|3LXS|A Chain A, Crystal Structure Analysis Of Cruzain Bound To Vinyl
           Sulfone Derived Inhibitor (Wrr483)
 gi|309319935|pdb|3LXS|C Chain C, Crystal Structure Analysis Of Cruzain Bound To Vinyl
           Sulfone Derived Inhibitor (Wrr483)
          Length = 215

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 114/202 (56%), Gaps = 15/202 (7%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q LV CD ++ 
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDS 61

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           GC+GG M++A ++I+  +NG V ++ +YPY + E                +  +  +P  
Sbjct: 62  GCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ- 120

Query: 415 EEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----TSIPYWIV 462
           +E ++  W+A  GP++V ++A+    Y+GGV        +D    L G     ++PYWI+
Sbjct: 121 DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWII 180

Query: 463 KNSWGSDWGEKVEDKVGSSGNR 484
           KNSW + WGE+   ++    N+
Sbjct: 181 KNSWTTQWGEEGYIRIAKGSNQ 202



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 45  LTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 104

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 105 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVM----TSCVSEQ 159

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D  ++PYWI+KNSW + WGE+
Sbjct: 160 LDHGVLLVGY-----NDSAAVPYWIIKNSWTTQWGEE 191



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 51


>gi|91092014|ref|XP_970644.1| PREDICTED: similar to cathepsin-L-like cysteine peptidase 02
           [Tribolium castaneum]
 gi|270001249|gb|EEZ97696.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 147/297 (49%), Gaps = 40/297 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAV---FGVNKFFD-LSESDLQQLTG 255
           H K Y S  +   R + F+ N  K   +    +   V    GVNK+ D L+   +  L G
Sbjct: 34  HKKQYESETEERFRMKIFMENAHKVAKHNKLYAQGLVSFKLGVNKYSDMLNHEFVHTLNG 93

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
            N   T          P  S + D  +      ++    +LP+  DWR  G ++ VK+QG
Sbjct: 94  YNRSKT----------PLRSGELDESITFIPPANV----ELPKQIDWRKLGAVTPVKDQG 139

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDN 373
           +C  CW+FS  G +E  H  +   L  LS Q L+DC     N GCNGG MD+A +YI DN
Sbjct: 140 QCGSCWSFSTTGSLEGQHFRKSKKLVSLSEQNLIDCSEKYGNNGCNGGLMDNAFRYIKDN 199

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++Q+YPYKA E E+       +G     + +  I  G+EE++K  VAT GP+SV +
Sbjct: 200 GGIDTEQSYPYKA-EDEKCHYKPRNKG--ATDRGFVDIESGDEEKLKAAVATVGPISVAI 256

Query: 434 NANGLFY--YSGGVI--------DLNQRL----YGT---SIPYWIVKNSWGSDWGEK 473
           +A+   +  YS GV          L+  +    YGT      YW+VKNSWG  WG++
Sbjct: 257 DASHPTFQQYSEGVYYEPECSSEQLDHGVLVVGYGTDEDGNDYWLVKNSWGDSWGDQ 313



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 98/160 (61%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + L+DC     N GCNGG MD+A +YI DNGG+ ++Q+YPYKA E E+     
Sbjct: 163 KLVSLSEQNLIDCSEKYGNNGCNGGLMDNAFRYIKDNGGIDTEQSYPYKA-EDEKCHYKP 221

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
             +G     + +  I  G+EE++K  VAT GP+SV ++A+   +  YS GV    +  C+
Sbjct: 222 RNKG--ATDRGFVDIESGDEEKLKAAVATVGPISVAIDASHPTFQQYSEGV--YYEPECS 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +++VGYG +E  DG    YW+VKNSWG  WG++
Sbjct: 278 SEQLDHGVLVVGYGTDE--DGND--YWLVKNSWGDSWGDQ 313



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 18/156 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQR-EDSGTAVFE--VNKFFDLSDSD-LQ 103
           F   H K Y S  +   R + F+ N  K   + +    G   F+  VNK+ D+ + + + 
Sbjct: 30  FKVTHKKQYESETEERFRMKIFMENAHKVAKHNKLYAQGLVSFKLGVNKYSDMLNHEFVH 89

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            L G N   T          P  S + D  +      ++    +LP+  DWR  G ++ V
Sbjct: 90  TLNGYNRSKT----------PLRSGELDESITFIPPANV----ELPKQIDWRKLGAVTPV 135

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG+C  CW+FS  G +E  H  +   L  LS Q+
Sbjct: 136 KDQGQCGSCWSFSTTGSLEGQHFRKSKKLVSLSEQN 171


>gi|237637248|gb|ACR07924.1| cysteine proteinase [Trypanosoma cruzi]
          Length = 345

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 114/202 (56%), Gaps = 15/202 (7%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q LV CD ++ 
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDF 61

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           GC+GG M++A ++I+  +NG V ++ +YPY + E                +  +  +P  
Sbjct: 62  GCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ- 120

Query: 415 EEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----TSIPYWIV 462
           +E ++  W+A  GP++V ++A+    Y+GGV        +D    L G     ++PYWI+
Sbjct: 121 DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWII 180

Query: 463 KNSWGSDWGEKVEDKVGSSGNR 484
           KNSW + WGE+   ++    N+
Sbjct: 181 KNSWTTQWGEEGYIRIAKGSNQ 202



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 45  LTNLSEQMLVSCDKTDFGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 104

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 105 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 159

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D  ++PYWI+KNSW + WGE+
Sbjct: 160 LDHGVLLVGY-----NDSAAVPYWIIKNSWTTQWGEE 191



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 51


>gi|119389039|pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human
           Procathepsin S
          Length = 315

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 114/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C   WAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 99  LPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 158

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 159 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 215

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 216 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 275

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 276 EYWLVKNSWGHNFGEE 291



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C  
Sbjct: 142 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY 199

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +PYG E+ +K+ VA +GP+SVG++A     F Y  GV    +  C
Sbjct: 200 -DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSC 256

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG+   K+     YW+VKNSWG ++GE+
Sbjct: 257 TQNV-NHGVLVVGYGDLNGKE-----YWLVKNSWGHNFGEE 291



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 33/51 (64%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C   WAFSAVG +EA   ++   L  LS Q
Sbjct: 99  LPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQ 149


>gi|146216002|gb|ABQ10203.1| cysteine protease Cp5 [Actinidia deliciosa]
          Length = 509

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 144/298 (48%), Gaps = 36/298 (12%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSED--SGTAVFGVNKFFDLSESDLQQLT 254
            + H KVY   +++ ++ +NF  N+    +   E   SG  + G+NKF D+S  + +++ 
Sbjct: 55  TEKHGKVYKHGQEVEKKFQNFRDNLRYVMEKNGERGASGGHLVGLNKFADMSNEEFREV- 113

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMR--AFQFNSLRHGDDLPEAFDWRAEGVISKVK 312
                         ++ P S        R             D P + DWR  G+++ VK
Sbjct: 114 ----------YVSKVKKPTSKRMAIERRRQGKAAAAKAVAACDGPTSLDWRKYGIVTGVK 163

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
           +QG C  CWAFS+ G +E ++A+    L  LS Q+LVDCD +N GC GG MD A ++++ 
Sbjct: 164 DQGDCGSCWAFSSTGAIEGINALANGDLISLSEQELVDCDSTNDGCEGGYMDYAFEWVMS 223

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           NGG+ ++  YPY   +    C   +EE   V +  Y  +   EEE        + P+SVG
Sbjct: 224 NGGIDTETDYPYTGEDGT--CNTTKEETKAVSIDGYEDV--AEEESALFCAVLKQPISVG 279

Query: 433 MNANGLFY--YSGGVIDLNQRL-------------YG--TSIPYWIVKNSWGSDWGEK 473
           ++   + +  Y+GG+ D +                YG  +   YWI+KNSWG+DWG K
Sbjct: 280 IDGGAIDFQLYTGGIYDGDCSDDPDDIDHAVLVVGYGAESGEEYWIIKNSWGTDWGMK 337



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD +N GC GG MD A ++++ NGG+ ++  YPY   +    C   +EE
Sbjct: 191 LISLSEQELVDCDSTNDGCEGGYMDYAFEWVMSNGGIDTETDYPYTGEDGT--CNTTKEE 248

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPKA 615
              V +  Y  +   EEE        + P+SVG++   + +  Y+GG+ D +    +P  
Sbjct: 249 TKAVSIDGYEDV--AEEESALFCAVLKQPISVGIDGGAIDFQLYTGGIYDGDCSD-DPDD 305

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +HA+++VGYG E  ++     YWI+KNSWG+DWG K
Sbjct: 306 IDHAVLVVGYGAESGEE-----YWIIKNSWGTDWGMK 337



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 15/161 (9%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA--EDYQREDSGTAVFEVNKFFDLSD 99
           V  F  +   H KVY   +++ ++ +NF  N+     ++ +R  SG  +  +NKF D+S+
Sbjct: 48  VELFKKWTEKHGKVYKHGQEVEKKFQNFRDNLRYVMEKNGERGASGGHLVGLNKFADMSN 107

Query: 100 SDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMR--AFQFNSLRHGDDLPEAFDWRAE 157
            + +++               ++ P S        R             D P + DWR  
Sbjct: 108 EEFREV-----------YVSKVKKPTSKRMAIERRRQGKAAAAKAVAACDGPTSLDWRKY 156

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G+++ VK+QG C  CWAFS+ G +E ++A+   +L  LS Q
Sbjct: 157 GIVTGVKDQGDCGSCWAFSSTGAIEGINALANGDLISLSEQ 197


>gi|30141027|dbj|BAC75927.1| cysteine protease-5 [Helianthus annuus]
          Length = 365

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 148/298 (49%), Gaps = 31/298 (10%)

Query: 191 NLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL 250
           N  EL +  H K Y+++ +   R   F  N++  +++    + +   G+N+F DL+  + 
Sbjct: 34  NTYELWLARHGKTYNALGEKESRFRIFADNLKFIDEHNLSGNRSYKVGLNQFADLTNEEY 93

Query: 251 QQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
           + +  G  +D       P  +         +   A Q N +      P   DWR  G +S
Sbjct: 94  RSMYLGTKVD-------PYRRIAKMQRGEISRRYAVQENEM-----FPAKVDWRERGAVS 141

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQ 368
            VK QG C  CWAFS V  VE ++ I    L  LS Q+LVDCD   N GCNGG MD A Q
Sbjct: 142 PVKNQGGCGSCWAFSTVASVEGINKIVTGDLISLSEQELVDCDNKYNSGCNGGSMDYAFQ 201

Query: 369 YIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGP 428
           +I+ NGG+ S+  YPYK   +   C     +   V +  Y  +P   E+ + K VA + P
Sbjct: 202 FIVSNGGIDSESDYPYKGVGAV--CDPVRNKAKIVSIDGYEDVPPMNEKALMKAVAHQ-P 258

Query: 429 LSVGMNANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWGE 472
           +SVG+ A+G  +  Y+ GV+      +L+  +    YG+     YWIV+NSWG +WGE
Sbjct: 259 VSVGIEASGRAFQLYTSGVLTGSCGTNLDHGVVVVGYGSENGKDYWIVRNSWGPEWGE 316



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++   L  L+ ++LVDCD   N GCNGG MD A Q+I+ NGG+ S+  YPYK   + 
Sbjct: 164 INKIVTGDLISLSEQELVDCDNKYNSGCNGGSMDYAFQFIVSNGGIDSESDYPYKGVGAV 223

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C     +   V +  Y  +P   E+ + K VA + P+SVG+ A+G  +  Y+ GV+  
Sbjct: 224 --CDPVRNKAKIVSIDGYEDVPPMNEKALMKAVAHQ-PVSVGIEASGRAFQLYTSGVLTG 280

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +   C     +H +++VGYG E  KD     YWIV+NSWG +WGE
Sbjct: 281 S---CGTNL-DHGVVVVGYGSENGKD-----YWIVRNSWGPEWGE 316



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQL-T 106
           ++  H K Y+++ +   R   F  N++  +++    + +    +N+F DL++ + + +  
Sbjct: 39  WLARHGKTYNALGEKESRFRIFADNLKFIDEHNLSGNRSYKVGLNQFADLTNEEYRSMYL 98

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
           G  +D       P  +         +   A Q N +      P   DWR  G +S VK Q
Sbjct: 99  GTKVD-------PYRRIAKMQRGEISRRYAVQENEM-----FPAKVDWRERGAVSPVKNQ 146

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G C  CWAFS V  VE ++ I   +L  LS Q
Sbjct: 147 GGCGSCWAFSTVASVEGINKIVTGDLISLSEQ 178


>gi|417401303|gb|JAA47542.1| Putative cathepsin f [Desmodus rotundus]
          Length = 459

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 143/294 (48%), Gaps = 41/294 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  +++ Y + E+   R   F+ N+ +A++ Q+ D GTA +GV KF DL+E + +    L
Sbjct: 166 IATYNRTYETEEEAQWRMSIFINNMVRAQEIQALDRGTAQYGVTKFSDLTEEEFRTFY-L 224

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           N              P        +MR  +       D  P  +DWR +G ++KVK QG 
Sbjct: 225 N--------------PLLKEGLGKKMRLAK----PVDDPAPPEWDWRNKGAVTKVKNQGM 266

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G VE    ++   L  LS Q+LVDCD  +  C GG   +A   I   GG+
Sbjct: 267 CGSCWAFSVTGNVEGQWFLKQGDLLSLSEQELVDCDTLDKACMGGLPSNAYSAIKTLGGL 326

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG-EEEEMKKWVATRGPLSVGMNA 435
            ++  Y Y      + C    E   KVKV     +    +E+++  W+A +GP+S+ +NA
Sbjct: 327 ETEDDYSYHG--HLQTCSFTAE---KVKVYINDSVELSKDEQKLAAWLAKKGPISIAINA 381

Query: 436 NGLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
            G+ +Y  G+            ID    L G    + +P+W +KNSWG+DWGE+
Sbjct: 382 FGMQFYRRGISRPLRLLCSPWFIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEE 435



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 87/156 (55%), Gaps = 11/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  +  C GG   +A   I   GG+ ++  Y Y      + C    E 
Sbjct: 290 LLSLSEQELVDCDTLDKACMGGLPSNAYSAIKTLGGLETEDDYSYHGHL--QTCSFTAE- 346

Query: 558 GFKVKVKEYSRIPYGEEEE-MKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
             KVKV     +   ++E+ +  W+A +GP+S+ +NA G+ +Y  G+    + LC+P   
Sbjct: 347 --KVKVYINDSVELSKDEQKLAAWLAKKGPISIAINAFGMQFYRRGISRPLRLLCSPWFI 404

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           +HA+++VGYG       + +P+W +KNSWG+DWGE+
Sbjct: 405 DHAVLLVGYGNR-----SDVPFWAIKNSWGTDWGEE 435



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 19/157 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V+ F +F+  +++ Y + E+   R   F+ N+ +A++ Q  D GTA + V KF DL++ +
Sbjct: 159 VSLFKHFIATYNRTYETEEEAQWRMSIFINNMVRAQEIQALDRGTAQYGVTKFSDLTEEE 218

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
            +    LN              P        +MR  +       D  P  +DWR +G ++
Sbjct: 219 FRTFY-LN--------------PLLKEGLGKKMRLAK----PVDDPAPPEWDWRNKGAVT 259

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           KVK QG C  CWAFS  G VE    ++  +L  LS Q
Sbjct: 260 KVKNQGMCGSCWAFSVTGNVEGQWFLKQGDLLSLSEQ 296


>gi|33333702|gb|AAQ11969.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 144/297 (48%), Gaps = 47/297 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTN-VEKAEDYQSEDSGTAVFG--VNKFFDLSESDLQQLTGL 256
           H K Y S+ +  RR   F  N ++  E  +  + G   F   V +F D++  +   L  L
Sbjct: 30  HGKTYRSLVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFADMTHEEFLDLLKL 89

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                L    PS    F  N  DT+M               +A DWR EG ++ VK+Q  
Sbjct: 90  QGVPAL----PSNAVHFD-NFEDTDMEE------------KDAVDWREEGAVTPVKDQAN 132

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC---DMSNGGCNGGRMDDALQYIIDN 373
           C  CWAFSAVG +E     +  +L  LS Q+LVDC   D  N GC GG M  A  ++ D 
Sbjct: 133 CGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQDE 192

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++++YPY+   S   C    E  +  KVK Y   P  +E+EM + VA +GP++V +
Sbjct: 193 -GIQTEESYPYEGRRS--SCKKSGE--YVTKVKTYV-FPL-DEQEMARTVAAKGPVAVAI 245

Query: 434 NANGLFYYSGGVIDLNQRL---------------YGTS--IPYWIVKNSWGSDWGEK 473
            A+ L +Y  G++D   R                YG+   + YWIVKNSWG+DWGEK
Sbjct: 246 EASQLSFYDKGIVDERCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 16/159 (10%)

Query: 498 LSRLATEKLVDC---DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           L  L+ ++LVDC   D  N GC GG M  A  ++ D G + ++++YPY+   S   C   
Sbjct: 156 LVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQDEG-IQTEESYPYEGRRS--SCKKS 212

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
            E  +  KVK Y   P  +E+EM + VA +GP++V + A+ L +Y  G++D   R  N +
Sbjct: 213 GE--YVTKVKTYV-FPL-DEQEMARTVAAKGPVAVAIEASQLSFYDKGIVDERCRCSNKR 268

Query: 615 AQ-NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              NH +++VGYG E       + YWIVKNSWG+DWGEK
Sbjct: 269 EDLNHGVLVVGYGSE-----NGVDYWIVKNSWGADWGEK 302



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 68/154 (44%), Gaps = 20/154 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTN-VEKAEDYQREDSGTAVF--EVNKFFDLSDSDLQQ 104
           F  DH K Y S+ +  RR   F  N ++  E  ++ + G   F  +V +F D++  +   
Sbjct: 26  FKLDHGKTYRSLVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFADMTHEEFLD 85

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           L  L     L    PS    F  N  DT+M               +A DWR EG ++ VK
Sbjct: 86  LLKLQGVPAL----PSNAVHFD-NFEDTDMEE------------KDAVDWREEGAVTPVK 128

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +Q  C  CWAFSAVG +E     +   L  LS Q
Sbjct: 129 DQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQ 162


>gi|2414570|emb|CAB16317.1| cysteine proteinase precursor [Nicotiana tabacum]
          Length = 374

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 155/301 (51%), Gaps = 34/301 (11%)

Query: 188 QGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSE 247
           Q  N  E+ +  H + Y+++ +  +R E F  N+   E + +  + T   G+N+F DL+ 
Sbjct: 45  QVKNRYEMWLAEHGRAYNALGEKEKRFEIFKDNLRFIEGHNNSGNRTYKVGLNQFADLTN 104

Query: 248 SDLQQL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 306
            + + +  G   D+         +  F  ++  ++  A + N L     +P + DWR  G
Sbjct: 105 EEYRTMYLGTKSDA---------RRRFVKSKNPSQRYASRPNEL-----MPHSVDWRKRG 150

Query: 307 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD-MSNGGCNGGRMDD 365
            ++ +K QG C  CWAFS V  VE ++ I    +  LS Q+LVDCD + N GCNGG MD 
Sbjct: 151 AVAPIKNQGSCGSCWAFSTVAAVEGINQIVTGEMITLSEQELVDCDRVQNSGCNGGLMDY 210

Query: 366 ALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVAT 425
           A ++II NGG+ +++ YPY+  E    C    +    V +  Y  +P   E  ++K VA 
Sbjct: 211 AFEFIISNGGMDTEKHYPYRGVEGR--CDPVRKNYKVVSIDGYEDVPR-NERALQKAVAH 267

Query: 426 RGPLSVGMNANGLFY--YSGGVI------DLNQRL----YGT--SIPYWIVKNSWGSDWG 471
           + P+ V + A+G  +  YS GV       +++  +    YG+   + YWIV+NSWG+ WG
Sbjct: 268 Q-PVCVAIEASGRAFQLYSSGVFTGECGEEVDHGVVVVGYGSEDGVDYWIVRNSWGTKWG 326

Query: 472 E 472
           E
Sbjct: 327 E 327



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 16/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  ++  ++  L+ ++LVDCD + N GCNGG MD A ++II NGG+ +++ YPY+  E  
Sbjct: 176 INQIVTGEMITLSEQELVDCDRVQNSGCNGGLMDYAFEFIISNGGMDTEKHYPYRGVEGR 235

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDL 606
             C    +    V +  Y  +P   E  ++K VA + P+ V + A+G  +  YS GV   
Sbjct: 236 --CDPVRKNYKVVSIDGYEDVPR-NERALQKAVAHQ-PVCVAIEASGRAFQLYSSGVFTG 291

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               C  +  +H +++VGYG E+  D     YWIV+NSWG+ WGE
Sbjct: 292 E---CGEEV-DHGVVVVGYGSEDGVD-----YWIVRNSWGTKWGE 327



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 15/156 (9%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           R+  ++ +H + Y+++ +  +R E F  N+   E +    + T    +N+F DL++ + +
Sbjct: 49  RYEMWLAEHGRAYNALGEKEKRFEIFKDNLRFIEGHNNSGNRTYKVGLNQFADLTNEEYR 108

Query: 104 QL-TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            +  G   D+         +  F  ++  ++  A + N L     +P + DWR  G ++ 
Sbjct: 109 TMYLGTKSDA---------RRRFVKSKNPSQRYASRPNEL-----MPHSVDWRKRGAVAP 154

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +K QG C  CWAFS V  VE ++ I    +  LS Q
Sbjct: 155 IKNQGSCGSCWAFSTVAAVEGINQIVTGEMITLSEQ 190


>gi|297851332|ref|XP_002893547.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339389|gb|EFH69806.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 345

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 148/295 (50%), Gaps = 42/295 (14%)

Query: 199 HHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL----QQLT 254
           +  +VY    +   R E F  N++  E++ +  S +   GVNKF D ++ +       L+
Sbjct: 44  NFSRVYDDEFEKQMRLEVFTENLKFIENFNNMGSQSYKLGVNKFTDWTKEEFLATHTGLS 103

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
           G+N+ S  E +  +  A    N T +             D L    DWR EG ++ VK Q
Sbjct: 104 GINVTSPFEVVNETTPA---WNWTVS-------------DVLGTTKDWRNEGAVTPVKYQ 147

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDN 373
           G+C  CWAFSA+  VE +  I   +L  LS QQL+DC    N GC GG M +A  YI+ N
Sbjct: 148 GECGGCWAFSAIAAVEGLTKIARGNLISLSEQQLLDCAREQNNGCKGGTMIEAFNYIVKN 207

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GGV S+ AYPY+  E    C   +     + ++ +  +P   E  + + V +R P++V +
Sbjct: 208 GGVSSENAYPYQVKEGP--CRSNDIPA--IVIRGFENVPSNNERALLEAV-SRQPVAVDI 262

Query: 434 NAN--GLFYYSGGVID-------LNQRL----YGTS---IPYWIVKNSWGSDWGE 472
           +A+  G  +YSGGV +       +N  +    YGTS   I YW+ KNSWG  WGE
Sbjct: 263 DASETGFIHYSGGVYNARDCGTSVNHAVTLVGYGTSQEGIKYWLAKNSWGKTWGE 317



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 15/165 (9%)

Query: 490 LTGVLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           LT +    L  L+ ++L+DC    N GC GG M +A  YI+ NGGV S+ AYPY+  E  
Sbjct: 165 LTKIARGNLISLSEQQLLDCAREQNNGCKGGTMIEAFNYIVKNGGVSSENAYPYQVKEGP 224

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDL 606
             C   +     + ++ +  +P   E  + + V +R P++V ++A+  G  +YSGGV   
Sbjct: 225 --CRSNDIPA--IVIRGFENVPSNNERALLEAV-SRQPVAVDIDASETGFIHYSGGV--Y 277

Query: 607 NQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           N R C     NHA+ +VGYG  ++     I YW+ KNSWG  WGE
Sbjct: 278 NARDCGTSV-NHAVTLVGYGTSQE----GIKYWLAKNSWGKTWGE 317



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 79/181 (43%), Gaps = 30/181 (16%)

Query: 23  KVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQRE 82
           +VAL E  IF    Y +        +M +  +VY    +   R E F  N++  E++   
Sbjct: 26  RVALHEPTIF----YYHQ------KWMINFSRVYDDEFEKQMRLEVFTENLKFIENFNNM 75

Query: 83  DSGTAVFEVNKFFDLSDSDL----QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQ 138
            S +    VNKF D +  +       L+G+N+ S  E +  +  A    N T +      
Sbjct: 76  GSQSYKLGVNKFTDWTKEEFLATHTGLSGINVTSPFEVVNETTPA---WNWTVS------ 126

Query: 139 FNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
                  D L    DWR EG ++ VK QG+C  CWAFSA+  VE +  I   NL  LS Q
Sbjct: 127 -------DVLGTTKDWRNEGAVTPVKYQGECGGCWAFSAIAAVEGLTKIARGNLISLSEQ 179

Query: 199 H 199
            
Sbjct: 180 Q 180


>gi|9542|emb|CAA78443.1| cysteine proteinase [Leishmania mexicana]
          Length = 443

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK+QG C  
Sbjct: 103 AYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVKDQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E    + G+ L  LS QQLV CD  + GC+GG M  A  +++   NG + 
Sbjct: 150 CWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMDNGCSGGLMLQAFDWLLQNTNGHLH 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +       C    E     ++  +  I    E+ M  W+A  GP+++ ++A+
Sbjct: 210 TEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDAS 268

Query: 437 GLFYYSGGVIDL---NQRLYGT---------SIPYWIVKNSWGSDWGEK 473
               Y  GV+      Q  +G           +PYW++KNSWG DWGE+
Sbjct: 269 SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L  L+ ++LV CD  + GC+GG M  A  +++ N  G + ++ +YPY +       C  
Sbjct: 169 ELVSLSEQQLVSCDDMDNGCSGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  +  I    E+ M  W+A  GP+++ ++A+    Y  GV+      C  
Sbjct: 229 SSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
           K  NH +++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 284 KQLNHGVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAA 96

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              LN  +     +      +   + D                +P+A DWR +G ++ VK
Sbjct: 97  RY-LNGAAYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFSAVG +E    + G+ L  LS Q
Sbjct: 143 DQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQ 176


>gi|157829894|pdb|1AIM|A Chain A, Cruzain Inhibited By
           Benzoyl-Tyrosine-Alanine-Fluoromethylketone
          Length = 215

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 114/202 (56%), Gaps = 15/202 (7%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q LV CD ++ 
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDS 61

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           GC+GG M++A ++I+  +NG V ++ +YPY + E                +  +  +P  
Sbjct: 62  GCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ- 120

Query: 415 EEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----TSIPYWIV 462
           +E ++  W+A  GP++V ++A+    Y+GGV        +D    L G     ++PYWI+
Sbjct: 121 DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEALDHGVLLVGYNDSAAVPYWII 180

Query: 463 KNSWGSDWGEKVEDKVGSSGNR 484
           KNSW + WGE+   ++    N+
Sbjct: 181 KNSWTTQWGEEGYIRIAKGSNQ 202



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 90/157 (57%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 45  LTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 104

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  +A
Sbjct: 105 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVM----TSCVSEA 159

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D  ++PYWI+KNSW + WGE+
Sbjct: 160 LDHGVLLVGY-----NDSAAVPYWIIKNSWTTQWGEE 191



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 51


>gi|268560858|ref|XP_002638172.1| C. briggsae CBR-CPL-1 protein [Caenorhabditis briggsae]
          Length = 336

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/308 (35%), Positives = 152/308 (49%), Gaps = 49/308 (15%)

Query: 201 DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS-GTAVF--GVNKFFDLSESDLQQLTG-- 255
           DK Y+  E+     E FV NV   E++  +   G   F  G+N   DL  S  ++L G  
Sbjct: 39  DKEYTESEEQTYM-EAFVKNVIHIENHNRDHRLGRKTFEMGLNHIADLPFSQYRKLNGYR 97

Query: 256 -LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
            L  DS +++   S  APF+                     +P+  DWR   +++ VK Q
Sbjct: 98  RLFGDSRIKN-SSSFLAPFNVQ-------------------VPDEVDWRDTHLVTDVKNQ 137

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIID 372
           G C  CWAFSA G +E  HA +   L  LS Q LVDC     N GCNGG MD A +YI D
Sbjct: 138 GMCGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRD 197

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           N GV ++++YPYK  + +  C   ++       K Y   P G+EE++K  VAT+GP+S+ 
Sbjct: 198 NHGVDTEESYPYKGRDMK--CHFNKKT-VGADDKGYVDTPEGDEEQLKIAVATQGPISIA 254

Query: 433 MNA---------NGLFY---YSGGVIDLNQRL--YGTSIP---YWIVKNSWGSDWGEKVE 475
           ++A          G++Y    S   +D    L  YGT      YW+VKNSWG+ WGEK  
Sbjct: 255 IDAGHRSFQLYKKGVYYDEECSSEELDHGVLLVGYGTDPEHGDYWLVKNSWGTGWGEKGY 314

Query: 476 DKVGSSGN 483
            ++  + N
Sbjct: 315 IRIARNRN 322



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 91/160 (56%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           +L  L+ + LVDC     N GCNGG MD A +YI DN GV ++++YPYK  + +  C   
Sbjct: 162 QLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHGVDTEESYPYKGRDMK--CHFN 219

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
           ++       K Y   P G+EE++K  VAT+GP+S+ ++A    +  Y  GV       C+
Sbjct: 220 KKT-VGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGV--YYDEECS 276

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +  +H +++VGYG     D     YW+VKNSWG+ WGEK
Sbjct: 277 SEELDHGVLLVGYG----TDPEHGDYWLVKNSWGTGWGEK 312



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 27/167 (16%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS-GTAVFE--VNKF 94
           + S + ++ ++  D DK Y+  E+     E FV NV   E++ R+   G   FE  +N  
Sbjct: 24  IESAIEKWDDYKEDFDKEYTESEEQTYM-EAFVKNVIHIENHNRDHRLGRKTFEMGLNHI 82

Query: 95  FDLSDSDLQQLTG---LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEA 151
            DL  S  ++L G   L  DS +++   S  APF+                     +P+ 
Sbjct: 83  ADLPFSQYRKLNGYRRLFGDSRIKN-SSSFLAPFNVQ-------------------VPDE 122

Query: 152 FDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            DWR   +++ VK QG C  CWAFSA G +E  HA +   L  LS Q
Sbjct: 123 VDWRDTHLVTDVKNQGMCGSCWAFSATGALEGQHARKLGQLVSLSEQ 169


>gi|242093994|ref|XP_002437487.1| hypothetical protein SORBIDRAFT_10g027980 [Sorghum bicolor]
 gi|241915710|gb|EER88854.1| hypothetical protein SORBIDRAFT_10g027980 [Sorghum bicolor]
          Length = 341

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 137/272 (50%), Gaps = 32/272 (11%)

Query: 206 SVEDLLRRHENFVTNVEKAEDYQSE-DSGTAVF--GVNKFFDLSESDLQQLTGLNLDSTL 262
           SV D LR  + F  N+   + + +E D+G   F  G+  F DL+  + +      L+STL
Sbjct: 66  SVADGLRL-KVFRDNLRYIDAHNAEADAGLHTFRLGLTPFTDLTLEEFRAHALGFLNSTL 124

Query: 263 EDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWA 322
             +      P                  R GDDLP+A DWR +G ++ VK Q  C  CWA
Sbjct: 125 PRVASDRYLP------------------RAGDDLPDAVDWRQQGAVTGVKNQLDCGGCWA 166

Query: 323 FSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAY 382
           FSAV  +E ++ I  N+L  LS Q+L+DCD  + GC GG M  A Q++IDNGG+ ++  Y
Sbjct: 167 FSAVAAMEGINKIVTNNLISLSEQELIDCDTEDYGCQGGEMQKAFQFVIDNGGIDTEADY 226

Query: 383 PYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYS 442
           P+  +     C    E+   V +  Y  +P  +EE ++K VA +  +    N    F   
Sbjct: 227 PFIGTNGT--CDAIREKRKVVSIDSYENVPTNDEEALQKAVANQPGI---FNGPCGFILD 281

Query: 443 GGVIDLNQRLYGTSI--PYWIVKNSWGSDWGE 472
            GV  +    YG+     +WIVKNSWG++WGE
Sbjct: 282 HGVTAVG---YGSDNGEDFWIVKNSWGAEWGE 310



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 27/162 (16%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           +  ++ + L  L+ ++L+DCD  + GC GG M  A Q++IDNGG+ ++  YP+  +    
Sbjct: 176 INKIVTNNLISLSEQELIDCDTEDYGCQGGEMQKAFQFVIDNGGIDTEADYPFIGTNGT- 234

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQR 609
            C    E+   V +  Y  +P  +EE ++K VA         N  G+F    G I     
Sbjct: 235 -CDAIREKRKVVSIDSYENVPTNDEEALQKAVA---------NQPGIFNGPCGFI----- 279

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
                  +H +  VGYG +  +D     +WIVKNSWG++WGE
Sbjct: 280 ------LDHGVTAVGYGSDNGED-----FWIVKNSWGAEWGE 310



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 67/144 (46%), Gaps = 22/144 (15%)

Query: 58  SVEDLLRRHENFVTNVEKAEDYQRE-DSGTAVFEV--NKFFDLSDSDLQQLTGLNLDSTL 114
           SV D LR  + F  N+   + +  E D+G   F +    F DL+  + +      L+STL
Sbjct: 66  SVADGLRL-KVFRDNLRYIDAHNAEADAGLHTFRLGLTPFTDLTLEEFRAHALGFLNSTL 124

Query: 115 EDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWA 174
             +      P                  R GDDLP+A DWR +G ++ VK Q  C  CWA
Sbjct: 125 PRVASDRYLP------------------RAGDDLPDAVDWRQQGAVTGVKNQLDCGGCWA 166

Query: 175 FSAVGVVEAMHAIQGNNLTELSVQ 198
           FSAV  +E ++ I  NNL  LS Q
Sbjct: 167 FSAVAAMEGINKIVTNNLISLSEQ 190


>gi|2780176|emb|CAA71085.1| cystein proteinase [Leishmania mexicana]
          Length = 443

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 31/289 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           + + Y ++ +  +R  NF  N+E   ++Q+ +   A FG+ KFFDLSE++      LN  
Sbjct: 45  YGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAARY-LNGA 102

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +     +      +   + D                +P+A DWR +G ++ VK QG C  
Sbjct: 103 AYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVKNQGACGS 149

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CWAFSAVG +E    + G+ L  LS QQLV CD  + GC+GG M  A  +++   NG + 
Sbjct: 150 CWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMDNGCSGGLMLQAFDWLLQNTNGHLY 209

Query: 378 SDQAYPYKASESERG-CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
           ++ +YPY +       C    E     ++  +  I    E+ M  W+A  GP+++ ++A+
Sbjct: 210 TEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDAS 268

Query: 437 GLFYYSGGVIDL---NQRLYGT---------SIPYWIVKNSWGSDWGEK 473
               Y  GV+      Q  +G           +PYW++KNSWG DWGE+
Sbjct: 269 SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 15/160 (9%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDN--GGVVSDQAYPYKASESERG-CLV 553
           +L  L+ ++LV CD  + GC+GG M  A  +++ N  G + ++ +YPY +       C  
Sbjct: 169 ELVSLSEQQLVSCDDMDNGCSGGLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYVPECSN 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
             E     ++  +  I    E+ M  W+A  GP+++ ++A+    Y  GV+      C  
Sbjct: 229 SSELVVGAQIDGHVLIG-SSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA----CIG 283

Query: 614 KAQNHALIIVGYGEEEKKDGTS-IPYWIVKNSWGSDWGEK 652
           K  NH +++VGY      D T  +PYW++KNSWG DWGE+
Sbjct: 284 KQLNHGVLLVGY------DMTGEVPYWVIKNSWGGDWGEQ 317



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 15/154 (9%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F R + + Y ++ +  +R  NF  N+E   ++Q  +   A F + KFFDLS+++   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNP-HAQFGITKFFDLSEAEFAA 96

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              LN  +     +      +   + D                +P+A DWR +G ++ VK
Sbjct: 97  RY-LNGAAYFAAAKRHAAQHYRKARADLSA-------------VPDAVDWREKGAVTPVK 142

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFSAVG +E    + G+ L  LS Q
Sbjct: 143 NQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQ 176


>gi|237637246|gb|ACR07923.1| cysteine proteinase [Trypanosoma cruzi]
          Length = 345

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 112/202 (55%), Gaps = 15/202 (7%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q LV CD ++ 
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDS 61

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           GC GG M++A ++I+  +NG V ++ +YPY + E                +  +  +P  
Sbjct: 62  GCGGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ- 120

Query: 415 EEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----TSIPYWIV 462
           +E ++  W+A  GP++V ++A+    Y+GGV        +D    L G     ++PYWI+
Sbjct: 121 DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWII 180

Query: 463 KNSWGSDWGEKVEDKVGSSGNR 484
           KNSW + WGE    ++    N+
Sbjct: 181 KNSWTAQWGEDGYIRIAKGSNQ 202



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 45  LTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 104

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 105 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 159

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYWI+KNSW + WGE
Sbjct: 160 LDHGVLLVGY-----NDSAAVPYWIIKNSWTAQWGE 190



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 51


>gi|62510452|sp|Q8HY81.1|CATS_CANFA RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497538|gb|AAO13009.1| cathepsin S preproprotein [Canis lupus familiaris]
          Length = 331

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 32/249 (12%)

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
           +DL  + L  +TG  + S    +  SL+ P S  Q +   R+   NS      LP++ DW
Sbjct: 73  YDLGMNHLGDMTGEEVIS----LMGSLRVP-SQWQRNVTYRS---NS---NQKLPDSVDW 121

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---SNGGCN 359
           R +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC      N GCN
Sbjct: 122 REKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCN 181

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG M  A QYIIDN G+ S+ +YPYKA     G    + +       +Y+ +P+G E+ +
Sbjct: 182 GGFMTTAFQYIIDNNGIDSEASYPYKAMN---GKCRYDSKKRAATCSKYTELPFGSEDAL 238

Query: 420 KKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSIPYWIVKN 464
           K+ VA +GP+SV ++A+    F Y  GV        ++N  +    YG      YW+VKN
Sbjct: 239 KEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGNLNGKDYWLVKN 298

Query: 465 SWGSDWGEK 473
           SWG ++G++
Sbjct: 299 SWGLNFGDQ 307



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 91/161 (56%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ S+ +YPYKA     G   
Sbjct: 158 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMN---GKCR 214

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +P+G E+ +K+ VA +GP+SV ++A+    F Y  GV    +  C
Sbjct: 215 YDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGV--YYEPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG    KD     YW+VKNSWG ++G++
Sbjct: 273 TQNV-NHGVLVVGYGNLNGKD-----YWLVKNSWGLNFGDQ 307



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 11/105 (10%)

Query: 95  FDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 154
           +DL  + L  +TG  + S    +  SL+ P S  Q +   R+   NS      LP++ DW
Sbjct: 73  YDLGMNHLGDMTGEEVIS----LMGSLRVP-SQWQRNVTYRS---NS---NQKLPDSVDW 121

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           R +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 122 REKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 166


>gi|1581747|prf||2117247C Cys protease:ISOTYPE=3
          Length = 469

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 141/290 (48%), Gaps = 29/290 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H KVY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QRHGKVYGSAAEETFRLGVFKENLLFARLHAAANP-HASFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     Q  ++ P           A            P A DWRA G ++ +K+QG C
Sbjct: 101 AAAHFAAAQKRVRVPVEVEVEVEVGGA------------PAAVDWRARGAVTAIKDQGNC 148

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
           + CWAFS +G +E    + GN LT LS Q LV CD ++ GC+GG MD A  +I+  +NG 
Sbjct: 149 SSCWAFSTIGNIEGQWHLAGNPLTGLSEQMLVSCDNADNGCDGGLMDSAFDWIVEQNNGS 208

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +Y Y +   +       +      +  +  +P  +E++M  W+A  GPL++ ++A
Sbjct: 209 VYTEASYSYVSGGGDSQTCDMSDHVVGAVISGHVDLPQ-DEDKMAAWLAVNGPLAIAVDA 267

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
                Y+GGV        +D    L G    ++ PYWI+KNSWG+DWGE+
Sbjct: 268 TSFMSYTGGVLTNCVSDQLDHGVVLVGYNDSSNPPYWIIKNSWGADWGEE 317



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 88/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC+GG MD A  +I+  +NG V ++ +Y Y +   +       
Sbjct: 171 LTGLSEQMLVSCDNADNGCDGGLMDSAFDWIVEQNNGSVYTEASYSYVSGGGDSQTCDMS 230

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
           +      +  +  +P  +E++M  W+A  GPL++ ++A     Y+GGV+      C    
Sbjct: 231 DHVVGAVISGHVDLPQ-DEDKMAAWLAVNGPLAIAVDATSFMSYTGGVL----TNCVSDQ 285

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      D ++ PYWI+KNSWG+DWGE+
Sbjct: 286 LDHGVVLVGY-----NDSSNPPYWIIKNSWGADWGEE 317



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 33/50 (66%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ +K+QG C+ CWAFS +G +E    + GN LT LS Q
Sbjct: 128 PAAVDWRARGAVTAIKDQGNCSSCWAFSTIGNIEGQWHLAGNPLTGLSEQ 177


>gi|402892718|ref|XP_003909556.1| PREDICTED: cathepsin F [Papio anubis]
          Length = 460

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 151/293 (51%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  +++ Y S E+   R   FV N+ +A+  Q+ D GTA +GV KF DL+E + + +  L
Sbjct: 167 VITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIY-L 225

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           N              P    +   +M+  Q  S+  GD  P  +DWR++G ++KVK+QG 
Sbjct: 226 N--------------PLLREEPGNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVKDQGM 267

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G VE    +   +L  LS Q+L+DCD  +  C GG   +A   I + GG+
Sbjct: 268 CGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGL 327

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  Y Y+     + C    E+  KV + +   +    E+++  W+A RGP+SV +NA 
Sbjct: 328 ETEDDYSYRG--HMQACNFSAEKA-KVYINDSVELSQ-NEQKLAAWLAKRGPISVAINAF 383

Query: 437 GLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           G+ +Y  G+            ID    L G    + IP+W +KNSWG+DWGEK
Sbjct: 384 GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEK 436



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 82/145 (56%), Gaps = 9/145 (6%)

Query: 508 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 567
           DCD  +  C GG   +A   I + GG+ ++  Y Y+     + C    E+  KV + +  
Sbjct: 301 DCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYRGHM--QACNFSAEKA-KVYINDSV 357

Query: 568 RIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE 627
            +    E+++  W+A RGP+SV +NA G+ +Y  G+    + LC+P   +HA+++VGYG 
Sbjct: 358 ELSQ-NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGN 416

Query: 628 EEKKDGTSIPYWIVKNSWGSDWGEK 652
                 + IP+W +KNSWG+DWGEK
Sbjct: 417 R-----SDIPFWAIKNSWGTDWGEK 436



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 19/138 (13%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F NF+  +++ Y S E+   R   FV N+ +A+  Q  D GTA + V KF DL++ + + 
Sbjct: 163 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 222

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +  LN              P    +   +M+  Q  S+  GD  P  +DWR++G ++KVK
Sbjct: 223 IY-LN--------------PLLREEPGNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVK 263

Query: 165 EQGKCACCWAFSAVGVVE 182
           +QG C  CWAFS  G VE
Sbjct: 264 DQGMCGSCWAFSVTGNVE 281


>gi|302790570|ref|XP_002977052.1| hypothetical protein SELMODRAFT_268054 [Selaginella moellendorffii]
 gi|300155028|gb|EFJ21661.1| hypothetical protein SELMODRAFT_268054 [Selaginella moellendorffii]
          Length = 300

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 144/291 (49%), Gaps = 44/291 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           H K YSS  +  RR   F   +   E + +  + T   G+NKF DL+ ++ +    G   
Sbjct: 9   HGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRANYVGKFK 68

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
               +D +P+          D ++ +           LP + DWR EG ++ +K+QG+C 
Sbjct: 69  PPRYQDRRPA-------KDVDVDVSS-----------LPTSLDWRQEGAVTPIKDQGQCG 110

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
            CWAFSA+  +E+ H +    L  LS QQL+DCD  + GC GG  +DA +++++NGGV +
Sbjct: 111 SCWAFSAIASIESAHFLATKELVSLSEQQLIDCDTVDQGCQGGFPEDAFKFVVENGGVTT 170

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKE---YSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           ++AYPY           G     K KV E   Y  +     + + K V ++ P++VG+  
Sbjct: 171 EEAYPYTG-------FAGSCNANKNKVVEITGYKDVTKDSADALMKAV-SKTPVTVGICG 222

Query: 436 NGLFY--YSGGVID---LNQR-------LYGT--SIPYWIVKNSWGSDWGE 472
           +   +  Y  G++     N R        YGT   +PYWI+KNSWG+ WGE
Sbjct: 223 SDQNFQNYRSGILSGHCSNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGE 273



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 95/170 (55%), Gaps = 23/170 (13%)

Query: 488 LELTGVLPSK-LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASE 546
           +E    L +K L  L+ ++L+DCD  + GC GG  +DA +++++NGGV +++AYPY    
Sbjct: 121 IESAHFLATKELVSLSEQQLIDCDTVDQGCQGGFPEDAFKFVVENGGVTTEEAYPYTG-- 178

Query: 547 SERGCLVGEEEGFKVKVKE---YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSG 601
                  G     K KV E   Y  +     + + K V ++ P++VG+  +   +  Y  
Sbjct: 179 -----FAGSCNANKNKVVEITGYKDVTKDSADALMKAV-SKTPVTVGICGSDQNFQNYRS 232

Query: 602 GVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           G++  +   C+  +++HA++++GYG E       +PYWI+KNSWG+ WGE
Sbjct: 233 GILSGH---CS-NSRDHAVLVIGYGTE-----GGMPYWIIKNSWGTSWGE 273



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 19/156 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           F  +   H K YSS  +  RR   F   +   E +    + T    +NKF DL++++ + 
Sbjct: 2   FEGWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRA 61

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
              G       +D +P+          D ++ +           LP + DWR EG ++ +
Sbjct: 62  NYVGKFKPPRYQDRRPA-------KDVDVDVSS-----------LPTSLDWRQEGAVTPI 103

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG+C  CWAFSA+  +E+ H +    L  LS Q 
Sbjct: 104 KDQGQCGSCWAFSAIASIESAHFLATKELVSLSEQQ 139


>gi|343473977|emb|CCD14279.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 159/331 (48%), Gaps = 35/331 (10%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYRDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVNVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  PEA DWR +G ++ VK+QGKC   WAF+ +G +E    I G+ LT LS Q LV
Sbjct: 124 ----GKAPEAVDWRKKGAVTPVKDQGKCDSSWAFTVIGNIEGQWKIAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD ++ GC  G MD A ++I+  ++G V ++Q+YPY +            +     +++
Sbjct: 180 SCDTNDLGCRAGFMDTAFKWIVSPNDGNVFTEQSYPYASGGGNVPACNKSGKVVGANIRD 239

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID--LNQRLYGTSI-------- 457
           +  I    E  + +W+A  GP+++ ++A     Y+GGV+   +++ +   ++        
Sbjct: 240 HVHI-LDNENAIAEWLAKNGPVAIAVDATSFQRYTGGVLTSCISKEVNSAALLVGYDDTS 298

Query: 458 --PYWIVKNSWGSDWGEKVEDKVGSSGNRTR 486
             PYWI+KNSWG  WGE+   ++    N+ R
Sbjct: 299 KPPYWIIKNSWGKGWGEEGYIRIEKGTNQCR 329



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVG 554
           +L+ L+ + LV CD ++ GC  G MD A ++I+  ++G V ++Q+YPY +          
Sbjct: 169 ELTSLSEQMLVSCDTNDLGCRAGFMDTAFKWIVSPNDGNVFTEQSYPYASGGGNVPACNK 228

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
             +     ++++  I    E  + +W+A  GP+++ ++A     Y+GGV+      C  K
Sbjct: 229 SGKVVGANIRDHVHI-LDNENAIAEWLAKNGPVAIAVDATSFQRYTGGVLTS----CISK 283

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             N A ++VGY +  K      PYWI+KNSWG  WGE+
Sbjct: 284 EVNSAALLVGYDDTSKP-----PYWIIKNSWGKGWGEE 316



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                PEA DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVNVST-------------GKAPEAVDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QGKC   WAF+ +G +E    I G+ LT LS Q
Sbjct: 142 KDQGKCDSSWAFTVIGNIEGQWKIAGHELTSLSEQ 176


>gi|577617|gb|AAC37213.1| cysteine proteinase [Trypanosoma cruzi]
          Length = 467

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 33/301 (10%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H +VY S  +   R   F  N+  A  + + +   A FGV  F DL+  + +     N
Sbjct: 43  QKHGRVYGSAAEEAFRLSVFRANLFLARLHAAANP-HATFGVTPFSDLTREEFRSRYH-N 100

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
             +     +   + P      D E+              P A DWR EG ++ VK QG C
Sbjct: 101 GAAHFAAAEERARVP-----VDVEVVG-----------APAAKDWREEGAVTAVKNQGIC 144

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAF+A+G +E    + GN LT LS Q LV CD +N GC GG    A ++I+  +NG 
Sbjct: 145 GSCWAFAAIGNIEGQWFLAGNPLTRLSEQMLVSCDNTNSGCGGGLSSKAFEWIVQENNGA 204

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           V ++ +YPY +    +      +      +  +  +P  +E ++    A +GPLSV ++A
Sbjct: 205 VYTEDSYPYHSCIGIKLPCKDSDRTVGATITGHVELPQ-DEAQIAASGAVKGPLSVAVDA 263

Query: 436 NGLFYYSGGVID--LNQRLY----------GTSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +  F+Y+GGV+   +++RL             ++PYWI+KNSW + WGE    ++    N
Sbjct: 264 SSWFFYTGGVLTNCVSKRLSHAVLLVGYNDSAAVPYWIIKNSWTTHWGEGGYIRIAKGSN 323

Query: 484 R 484
           +
Sbjct: 324 Q 324



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+RL+ + LV CD +N GC GG    A ++I+  +NG V ++ +YPY +    +      
Sbjct: 167 LTRLSEQMLVSCDNTNSGCGGGLSSKAFEWIVQENNGAVYTEDSYPYHSCIGIKLPCKDS 226

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
           +      +  +  +P  +E ++    A +GPLSV ++A+  F+Y+GGV+      C  K 
Sbjct: 227 DRTVGATITGHVELPQ-DEAQIAASGAVKGPLSVAVDASSWFFYTGGVLTN----CVSKR 281

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +HA+++VGY      D  ++PYWI+KNSW + WGE
Sbjct: 282 LSHAVLLVGY-----NDSAAVPYWIIKNSWTTHWGE 312



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++F  F + H +VY S  +   R   F  N+  A  +   +   A F V  F DL+  + 
Sbjct: 36  SQFAEFKQKHGRVYGSAAEEAFRLSVFRANLFLARLHAAANP-HATFGVTPFSDLTREEF 94

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +     N  +     +   + P      D E+              P A DWR EG ++ 
Sbjct: 95  RSRYH-NGAAHFAAAEERARVP-----VDVEVVG-----------APAAKDWREEGAVTA 137

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CWAF+A+G +E    + GN LT LS Q
Sbjct: 138 VKNQGICGSCWAFAAIGNIEGQWFLAGNPLTRLSEQ 173


>gi|359359066|gb|AEV40973.1| putative oryzain beta chain precursor [Oryza punctata]
          Length = 461

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 155/302 (51%), Gaps = 49/302 (16%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVE--KAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           +L +  + + Y+++ +  RR   F  N++   A + ++++ G    G+N+F DL+  + +
Sbjct: 50  DLWLAENGRSYNALGERERRFRVFWDNLKFVDAHNARADEHGGFRLGMNRFADLTNDEFR 109

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG--DDLPEAFDWRAEGVIS 309
                              + F   +     RA      RH   ++LPE+ DWR +G ++
Sbjct: 110 -------------------STFLGAKVVERSRA-AGERYRHDGVEELPESVDWREKGAVA 149

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDAL 367
            VK QG+C  CWAFSAV  VE+++ +    +  LS Q+LV+C  +  N GCNGG MDDA 
Sbjct: 150 PVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAF 209

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
            +II NGG+ ++  YPYKA + +  C +  E    V +  +  +P  +E+ ++K VA + 
Sbjct: 210 DFIIKNGGIDTEDDYPYKAVDGK--CDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQ- 266

Query: 428 PLSVGMNANGL---FYYSG------------GVIDLNQRLYGT--SIPYWIVKNSWGSDW 470
           P+SV + A G     Y+SG            GV+ +    YGT     YWIV+NSWG  W
Sbjct: 267 PVSVAIEAGGREFQLYHSGVFSGRCGTSLDHGVVAVG---YGTDNGKDYWIVRNSWGPKW 323

Query: 471 GE 472
           GE
Sbjct: 324 GE 325



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 18/164 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           ++  ++  L+ ++LV+C  +  N GCNGG MDDA  +II NGG+ ++  YPYKA + +  
Sbjct: 175 LVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGK-- 232

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLN 607
           C +  E    V +  +  +P  +E+ ++K VA + P+SV + A G     Y+SG    + 
Sbjct: 233 CDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQ-PVSVAIEAGGREFQLYHSG----VF 287

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              C   + +H ++ VGYG +  KD     YWIV+NSWG  WGE
Sbjct: 288 SGRCG-TSLDHGVVAVGYGTDNGKD-----YWIVRNSWGPKWGE 325



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 24/155 (15%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVE--KAEDYQREDSGTAVFEVNKFFDLSDSDLQQL 105
           ++ ++ + Y+++ +  RR   F  N++   A + + ++ G     +N+F DL++ + +  
Sbjct: 52  WLAENGRSYNALGERERRFRVFWDNLKFVDAHNARADEHGGFRLGMNRFADLTNDEFR-- 109

Query: 106 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG--DDLPEAFDWRAEGVISKV 163
                            + F   +     RA      RH   ++LPE+ DWR +G ++ V
Sbjct: 110 -----------------STFLGAKVVERSRA-AGERYRHDGVEELPESVDWREKGAVAPV 151

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG+C  CWAFSAV  VE+++ +    +  LS Q
Sbjct: 152 KNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQ 186


>gi|343472970|emb|CCD15012.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 382

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 153/318 (48%), Gaps = 35/318 (11%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYRDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVNVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  P A DWR +G ++ VK+QG+C   WAFSA+G +E    + G+ LT LS Q LV
Sbjct: 124 ----GKAPPAIDWRKKGAVTPVKDQGQCDSSWAFSAIGNIEGQWKVAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKE 407
            CD ++ GC GG  D A ++I+  + G V ++Q+YPY +            +    K+++
Sbjct: 180 SCDTNDFGCGGGFSDPAFKWIVSSNKGNVFTEQSYPYASGGGNVPTCDKSGKVVGAKIRD 239

Query: 408 YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVI------DLNQRLY------GT 455
              +P  +E  + +W+A  GP+++ ++A     Y+GGV+      ++N  +        +
Sbjct: 240 RVDLPR-DENAIAEWLAKNGPVAIAVDATSFQSYTGGVLTSCISKEMNSAVLLVGYDDTS 298

Query: 456 SIPYWIVKNSWGSDWGEK 473
             PYWI+KNSW   WGEK
Sbjct: 299 KPPYWIIKNSWSKGWGEK 316



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVG 554
           +L+ L+ + LV CD ++ GC GG  D A ++I+  + G V ++Q+YPY +          
Sbjct: 169 ELTSLSEQMLVSCDTNDFGCGGGFSDPAFKWIVSSNKGNVFTEQSYPYASGGGNVPTCDK 228

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
             +    K+++   +P  +E  + +W+A  GP+++ ++A     Y+GGV+      C  K
Sbjct: 229 SGKVVGAKIRDRVDLPR-DENAIAEWLAKNGPVAIAVDATSFQSYTGGVLTS----CISK 283

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             N A+++VGY +  K      PYWI+KNSW   WGEK
Sbjct: 284 EMNSAVLLVGYDDTSKP-----PYWIIKNSWSKGWGEK 316



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                P A DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVNVST-------------GKAPPAIDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG+C   WAFSA+G +E    + G+ LT LS Q
Sbjct: 142 KDQGQCDSSWAFSAIGNIEGQWKVAGHELTSLSEQ 176


>gi|302763837|ref|XP_002965340.1| hypothetical protein SELMODRAFT_143126 [Selaginella moellendorffii]
 gi|302790566|ref|XP_002977050.1| hypothetical protein SELMODRAFT_232903 [Selaginella moellendorffii]
 gi|300155026|gb|EFJ21659.1| hypothetical protein SELMODRAFT_232903 [Selaginella moellendorffii]
 gi|300167573|gb|EFJ34178.1| hypothetical protein SELMODRAFT_143126 [Selaginella moellendorffii]
          Length = 300

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 144/291 (49%), Gaps = 44/291 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           H K YSS  +  RR   F   +   E + +  + T   G+NKF DL+ ++ +    G   
Sbjct: 9   HGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRANYVGKFK 68

Query: 259 DSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCA 318
               +D +P+          D ++ +           LP + DWR EG ++ +K+QG+C 
Sbjct: 69  PPRYQDRRPA-------KDVDVDVSS-----------LPTSLDWRQEGAVTPIKDQGQCG 110

Query: 319 CCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVS 378
            CWAFSA+  +E+ H +    L  LS QQL+DCD  + GC GG  +DA +++++NGGV +
Sbjct: 111 SCWAFSAIASIESAHFLATKELVSLSEQQLIDCDTVDQGCQGGFPEDAFKFVVENGGVTT 170

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKE---YSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           ++AYPY           G     K KV E   Y  +     + + K V ++ P++VG+  
Sbjct: 171 EEAYPYTG-------FAGSCNANKNKVVEITGYKDVTKDSADALMKAV-SKTPVTVGICG 222

Query: 436 NGLFY--YSGGVID---LNQR-------LYGT--SIPYWIVKNSWGSDWGE 472
           +   +  Y  G++     N R        YGT   +PYWI+KNSWG+ WGE
Sbjct: 223 SDQNFQNYRSGILSGHCSNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGE 273



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 91/160 (56%), Gaps = 22/160 (13%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           +L  L+ ++L+DCD  + GC GG  +DA +++++NGGV +++AYPY           G  
Sbjct: 131 ELVSLSEQQLIDCDTVDQGCQGGFPEDAFKFVVENGGVTTEEAYPYTG-------FAGSC 183

Query: 557 EGFKVKVKE---YSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLC 611
              K KV E   Y  +     + + K V ++ P++VG+  +   +  Y  G++  +   C
Sbjct: 184 NANKNKVVEITGYKDVTKDSADALMKAV-SKTPVTVGICGSDQNFQNYRSGILSGH---C 239

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           +  +++HA++++GYG E       +PYWI+KNSWG+ WGE
Sbjct: 240 S-NSRDHAVLVIGYGTE-----GGMPYWIIKNSWGTSWGE 273



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 19/156 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           F  +   H K YSS  +  RR   F   +   E +    + T    +NKF DL++++ + 
Sbjct: 2   FEGWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRA 61

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
              G       +D +P+          D ++ +           LP + DWR EG ++ +
Sbjct: 62  NYVGKFKPPRYQDRRPA-------KDVDVDVSS-----------LPTSLDWRQEGAVTPI 103

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG+C  CWAFSA+  +E+ H +    L  LS Q 
Sbjct: 104 KDQGQCGSCWAFSAIASIESAHFLATKELVSLSEQQ 139


>gi|75812934|ref|NP_001028787.1| cathepsin S precursor [Bos taurus]
 gi|115503669|sp|P25326.2|CATS_BOVIN RecName: Full=Cathepsin S; Flags: Precursor
 gi|74353837|gb|AAI02246.1| Cathepsin S [Bos taurus]
 gi|296489535|tpg|DAA31648.1| TPA: cathepsin S precursor [Bos taurus]
          Length = 331

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC  + 
Sbjct: 115 LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 174

Query: 355 --NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M +A QYIIDN G+ S+ +YPYKA +   G    + +        Y  +P
Sbjct: 175 YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD---GKCQYDVKNRAATCSRYIELP 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI-------DLNQRL----YGT--SI 457
           +G EE +K+ VA +GP+SVG++A  +  F Y  GV        ++N  +    YG     
Sbjct: 232 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGK 291

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG  +G++
Sbjct: 292 DYWLVKNSWGLHFGDQ 307



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDMS---NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC  +   N GCNGG M +A QYIIDN G+ S+ +YPYKA +   G   
Sbjct: 158 KLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD---GKCQ 214

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLC 611
            + +        Y  +P+G EE +K+ VA +GP+SVG++A  +  F Y  GV       C
Sbjct: 215 YDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGV--YYDPSC 272

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG  + KD     YW+VKNSWG  +G++
Sbjct: 273 TQNV-NHGVLVVGYGNLDGKD-----YWLVKNSWGLHFGDQ 307



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q
Sbjct: 115 LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQ 165


>gi|237637240|gb|ACR07920.1| cysteine proteinase [Trypanosoma cruzi]
          Length = 345

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 112/202 (55%), Gaps = 15/202 (7%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q LV CD ++ 
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDS 61

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           GC GG M++A ++I+  +NG V ++ +YPY + E                +  +  +P  
Sbjct: 62  GCGGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ- 120

Query: 415 EEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----TSIPYWIV 462
           +E ++  W+A  GP++V ++A+    Y+GGV        +D    L G     ++PYWI+
Sbjct: 121 DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWII 180

Query: 463 KNSWGSDWGEKVEDKVGSSGNR 484
           KNSW + WGE    ++    N+
Sbjct: 181 KNSWTAQWGEDGYIRIAKGSNQ 202



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 45  LTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 104

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 105 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 159

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYWI+KNSW + WGE
Sbjct: 160 LDHGVLLVGY-----NDSAAVPYWIIKNSWTAQWGE 190



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 51


>gi|297801998|ref|XP_002868883.1| hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314719|gb|EFH45142.1| hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 368

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 144/300 (48%), Gaps = 51/300 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           KVY+S E+   R   F  N+ +A  +Q  D  +A  GV +F DL+ S+ ++         
Sbjct: 60  KVYASNEEHDYRFSVFKANLRRARRHQKLDP-SARHGVTQFSDLTRSEFRK--------K 110

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
              ++   + P  +N+            +   ++LPE FDWR  G ++ VK QG C  CW
Sbjct: 111 HLGVRAGFKLPKDANKA----------PILPTENLPEDFDWRDRGAVTPVKNQGSCGSCW 160

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDALQYIID 372
           +FSA G +E  + +    L  LS QQLVDCD           + GCNGG M+ A +Y + 
Sbjct: 161 SFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLK 220

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
            GG++ ++ YPY   + +   L  ++      V  +S I   +EE++   +   GPL+V 
Sbjct: 221 TGGLMKEEDYPYTGKDGKTCKL--DKSKIVASVSNFSVISI-DEEQIAANLVKNGPLAVA 277

Query: 433 MNANGLFYYSGGV---IDLNQRL--------YGTS---------IPYWIVKNSWGSDWGE 472
           +NA  +  Y GGV       +RL        YG++          PYWI+KNSWG  WGE
Sbjct: 278 INAGYMQTYIGGVSCPYICTRRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGETWGE 337



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 33/219 (15%)

Query: 447 DLNQRLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS-KLSRLAT 503
           D + R  G   P   VKN  S GS W          S + T  LE    L + KL  L+ 
Sbjct: 138 DFDWRDRGAVTP---VKNQGSCGSCW----------SFSATGALEGANFLATGKLVSLSE 184

Query: 504 EKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           ++LVDCD           + GCNGG M+ A +Y +  GG++ ++ YPY   + +   L  
Sbjct: 185 QQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKL-- 242

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           ++      V  +S I   +EE++   +   GPL+V +NA  +  Y GGV      +C  +
Sbjct: 243 DKSKIVASVSNFSVISI-DEEQIAANLVKNGPLAVAINAGYMQTYIGGVS--CPYICT-R 298

Query: 615 AQNHALIIVGYGEEEKKDG--TSIPYWIVKNSWGSDWGE 651
             NH +++VGYG            PYWI+KNSWG  WGE
Sbjct: 299 RLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGETWGE 337



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 19/156 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F     KVY+S E+   R   F  N+ +A  +Q+ D  +A   V +F DL+ S+ +
Sbjct: 50  HFSLFKSKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDP-SARHGVTQFSDLTRSEFR 108

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +            ++   + P  +N+            +   ++LPE FDWR  G ++ V
Sbjct: 109 K--------KHLGVRAGFKLPKDANKA----------PILPTENLPEDFDWRDRGAVTPV 150

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CW+FSA G +E  + +    L  LS Q 
Sbjct: 151 KNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQ 186


>gi|410045434|ref|XP_003313198.2| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Pan troglodytes]
          Length = 548

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 152/293 (51%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  +++ Y S E+   R   FV N+ +A+  Q+ D GTA +GV KF DL+E + + +  L
Sbjct: 255 VITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIY-L 313

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           N              P    +   +M+  Q  S+  GD  P  +DWR++G ++KVK+QG 
Sbjct: 314 N--------------PLLRKEPGNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVKDQGM 355

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G VE    +   +L  LS Q+L+DCD  +  C GG   +A   I + GG+
Sbjct: 356 CGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGL 415

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  Y Y+     + C    E+  KV + + S +    E+++  W+A RGP+SV +NA 
Sbjct: 416 ETEDDYSYQG--HMQSCNFSAEKA-KVYIND-SVVLSQNEQKLAAWLAKRGPISVAINAF 471

Query: 437 GLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           G+ +Y  G+            ID    L G    + +P+W +KNSWG+DWGEK
Sbjct: 472 GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEK 524



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 9/145 (6%)

Query: 508 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 567
           DCD  +  C GG   +A   I + GG+ ++  Y Y+     + C    E+  KV + + S
Sbjct: 389 DCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHM--QSCNFSAEKA-KVYIND-S 444

Query: 568 RIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE 627
            +    E+++  W+A RGP+SV +NA G+ +Y  G+    + LC+P   +HA+++VGYG 
Sbjct: 445 VVLSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGN 504

Query: 628 EEKKDGTSIPYWIVKNSWGSDWGEK 652
                 + +P+W +KNSWG+DWGEK
Sbjct: 505 R-----SDVPFWAIKNSWGTDWGEK 524



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 19/138 (13%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F NF+  +++ Y S E+   R   FV N+ +A+  Q  D GTA + V KF DL++ + + 
Sbjct: 251 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 310

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +  LN              P    +   +M+  Q  S+  GD  P  +DWR++G ++KVK
Sbjct: 311 IY-LN--------------PLLRKEPGNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVK 351

Query: 165 EQGKCACCWAFSAVGVVE 182
           +QG C  CWAFS  G VE
Sbjct: 352 DQGMCGSCWAFSVTGNVE 369


>gi|307110445|gb|EFN58681.1| hypothetical protein CHLNCDRAFT_56822 [Chlorella variabilis]
          Length = 466

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 148/296 (50%), Gaps = 40/296 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           VQ   + Y+S E+  RR + ++ N+    +Y +  + +    +  + DLS+ + +    L
Sbjct: 44  VQTLKRAYASAEEYERRFDVWLDNLRFVHEYNAGHT-SHWLSMGVYADLSQDEYRS-KAL 101

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
             ++ L + +P   APF                L  G   P+  DW A+G ++ VK Q  
Sbjct: 102 GYNADLHEERPLRAAPF----------------LYEGTVPPKEVDWVAKGAVTPVKNQLL 145

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS-NGGCNGGRMDDALQYIIDNGG 375
           C  CWAFS  G VE   AI    L  LS Q LVDCD   + GC+GG MD A ++I+ NGG
Sbjct: 146 CGSCWAFSTTGAVEGASAIATGKLASLSEQMLVDCDRERDNGCHGGLMDFAFEFIMKNGG 205

Query: 376 VVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           + ++  YPY A E    C   +     V + +Y  +P  +E  + K VA + P+SV + A
Sbjct: 206 IDTEDDYPYTAEEGM--CQDNKMRRHVVTIDDYQDVPPNDEHALMKAVANQ-PVSVAIEA 262

Query: 436 NGLFY--YSGGVID------LNQRL----YGTS------IPYWIVKNSWGSDWGEK 473
           +   +  Y GGV D      L+  +    YGT+      +PYW+VKNSWG++WG+K
Sbjct: 263 DQRAFQLYGGGVFDAECGTALDHGVLVVGYGTASNGTHHLPYWLVKNSWGAEWGDK 318



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 96/166 (57%), Gaps = 13/166 (7%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           + +   KL+ L+ + LVDCD   + GC+GG MD A ++I+ NGG+ ++  YPY A E   
Sbjct: 162 SAIATGKLASLSEQMLVDCDRERDNGCHGGLMDFAFEFIMKNGGIDTEDDYPYTAEEGM- 220

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLN 607
            C   +     V + +Y  +P  +E  + K VA + P+SV + A+   +  Y GGV D  
Sbjct: 221 -CQDNKMRRHVVTIDDYQDVPPNDEHALMKAVANQ-PVSVAIEADQRAFQLYGGGVFDAE 278

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGT-SIPYWIVKNSWGSDWGEK 652
              C   A +H +++VGYG     +GT  +PYW+VKNSWG++WG+K
Sbjct: 279 ---CG-TALDHGVLVVGYG--TASNGTHHLPYWLVKNSWGAEWGDK 318



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 18/161 (11%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           + SP   F  +++   + Y+S E+  RR + ++ N+    +Y    + +    +  + DL
Sbjct: 33  VESPREAFDFWVQTLKRAYASAEEYERRFDVWLDNLRFVHEYNAGHT-SHWLSMGVYADL 91

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
           S  + +    L  ++ L + +P   APF                L  G   P+  DW A+
Sbjct: 92  SQDEYRS-KALGYNADLHEERPLRAAPF----------------LYEGTVPPKEVDWVAK 134

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G ++ VK Q  C  CWAFS  G VE   AI    L  LS Q
Sbjct: 135 GAVTPVKNQLLCGSCWAFSTTGAVEGASAIATGKLASLSEQ 175


>gi|449673497|ref|XP_002169904.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 325

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 147/299 (49%), Gaps = 60/299 (20%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ-QLTGLNL 258
           H+K YS   +   R+  +  N+ +  +Y S+ S   +  +N F D++ ++ + ++ GL L
Sbjct: 34  HNKAYSHESEENVRYAIWKDNMNRITEYNSK-SKNVILRMNHFGDMTNTEFRAKMNGLLL 92

Query: 259 D-----STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
                 ST   + PS  A                         P+A DWR+EG ++ VK 
Sbjct: 93  HKHQNGSTF--LVPSHTAA------------------------PDAVDWRSEGYVTPVKN 126

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC--DMSNGGCNGGRMDDALQYII 371
           QG+C  CWAFS+ G +E  H  +   L  LS Q LVDC  D  N GCNGG MD+A  YI 
Sbjct: 127 QGQCGSCWAFSSTGALEGQHFKKTGRLVSLSEQNLVDCSTDYGNNGCNGGLMDNAFSYIK 186

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
            NGG+ ++  YPY   E + G     +         +  IP G+E+ +K+ VAT GP+SV
Sbjct: 187 ANGGIDTETGYPY---EGQDGTCRYSKSSIGADDTGFVDIPEGDEDALKQAVATVGPVSV 243

Query: 432 GMNANGL---FYYSG--------------GVIDLNQRLYGT--SIPYWIVKNSWGSDWG 471
            ++A+ +   FY+SG              GV+ +    YGT     YW+VKNSWG+ WG
Sbjct: 244 AIDASHMSFQFYHSGVYDEPQCSPSALDHGVLVVG---YGTDNGKDYWLVKNSWGTGWG 299



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 16/159 (10%)

Query: 497 KLSRLATEKLVDC--DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           +L  L+ + LVDC  D  N GCNGG MD+A  YI  NGG+ ++  YPY   E + G    
Sbjct: 152 RLVSLSEQNLVDCSTDYGNNGCNGGLMDNAFSYIKANGGIDTETGYPY---EGQDGTCRY 208

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLNQRLC 611
            +         +  IP G+E+ +K+ VAT GP+SV ++A+ +   FY+S GV D  Q  C
Sbjct: 209 SKSSIGADDTGFVDIPEGDEDALKQAVATVGPVSVAIDASHMSFQFYHS-GVYDEPQ--C 265

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
           +P A +H +++VGYG +  KD     YW+VKNSWG+ WG
Sbjct: 266 SPSALDHGVLVVGYGTDNGKD-----YWLVKNSWGTGWG 299



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 33/154 (21%)

Query: 52  HDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ-QLTGLNL 110
           H+K YS   +   R+  +  N+ +  +Y  + S   +  +N F D+++++ + ++ GL L
Sbjct: 34  HNKAYSHESEENVRYAIWKDNMNRITEYNSK-SKNVILRMNHFGDMTNTEFRAKMNGLLL 92

Query: 111 D-----STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 165
                 ST   + PS  A                         P+A DWR+EG ++ VK 
Sbjct: 93  HKHQNGSTF--LVPSHTAA------------------------PDAVDWRSEGYVTPVKN 126

Query: 166 QGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           QG+C  CWAFS+ G +E  H  +   L  LS Q+
Sbjct: 127 QGQCGSCWAFSSTGALEGQHFKKTGRLVSLSEQN 160


>gi|217073894|gb|ACJ85307.1| unknown [Medicago truncatula]
 gi|388507498|gb|AFK41815.1| unknown [Medicago truncatula]
          Length = 362

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 153/301 (50%), Gaps = 27/301 (8%)

Query: 196 SVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG 255
           S   HDK  SS E L   +E + ++   + +   +     VF  N     + + + +   
Sbjct: 22  SFDFHDKDVSSDESLWDLYERWRSHHTVSRNLNEKQKRFNVFKSNVMHVHNTNKMDKPYK 81

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL-------PEAFDWRAEGVI 308
           L L+   +      +  ++ ++ +   R F+      G  +       P + DWR +G +
Sbjct: 82  LKLNKFADMTNHEFKTTYAGSKVN-HHRMFRGTPRVSGTFMYENFTKAPASVDWRKKGAV 140

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD-MSNGGCNGGRMDDAL 367
           + VK+QG+C  CWAFS V  VE ++ I+ N L  LS Q+L+DCD   N GCNGG M+ A 
Sbjct: 141 TDVKDQGQCGSCWAFSTVVAVEGINQIKTNRLVPLSEQELIDCDNQENQGCNGGLMEYAF 200

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           +YI   GGV ++  YPY A++    C   +E    V +  +  +P  +E+ + K VA + 
Sbjct: 201 EYIKQKGGVTTESYYPYTANDGS--CDATKENVPTVSIDGHETVPANDEDALLKAVANQ- 257

Query: 428 PLSVGMNANG--LFYYSGGVI------DLNQRL----YGTSIP---YWIVKNSWGSDWGE 472
           P+SV ++A G    +YS GV       +LN  +    YGT++    YWIV+NSWG++WGE
Sbjct: 258 PVSVAIDAGGSDFQFYSEGVFTGDCGKELNHGVAIVGYGTTVDGTNYWIVRNSWGAEWGE 317

Query: 473 K 473
           +
Sbjct: 318 Q 318



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 95/165 (57%), Gaps = 18/165 (10%)

Query: 493 VLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +  ++L  L+ ++L+DCD   N GCNGG M+ A +YI   GGV ++  YPY A++    C
Sbjct: 167 IKTNRLVPLSEQELIDCDNQENQGCNGGLMEYAFEYIKQKGGVTTESYYPYTANDGS--C 224

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI--DLN 607
              +E    V +  +  +P  +E+ + K VA + P+SV ++A G    +YS GV   D  
Sbjct: 225 DATKENVPTVSIDGHETVPANDEDALLKAVANQ-PVSVAIDAGGSDFQFYSEGVFTGDCG 283

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           + L      NH + IVGYG     DGT+  YWIV+NSWG++WGE+
Sbjct: 284 KEL------NHGVAIVGYG--TTVDGTN--YWIVRNSWGAEWGEQ 318



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  ++ +  +R   F +NV    +  + D    + ++NKF D+++ + +      
Sbjct: 44  RSHHTVSRNLNEKQKRFNVFKSNVMHVHNTNKMDKPYKL-KLNKFADMTNHEFK------ 96

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             +T    + +    F    T      F + +       P + DWR +G ++ VK+QG+C
Sbjct: 97  --TTYAGSKVNHHRMFRG--TPRVSGTFMYENFTKA---PASVDWRKKGAVTDVKDQGQC 149

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 150 GSCWAFSTVVAVEGINQIKTNRLVPLSEQ 178


>gi|146335582|gb|ABQ23400.1| cathepsin L isotype 3 [Trypanoplasma borreli]
          Length = 442

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 31/301 (10%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H + Y+S ++  +R E F  N++KA +   ++   A FG N+F D+S  + Q        
Sbjct: 32  HARNYASADEERKRFEIFAANMKKAAELNRKNP-MATFGPNEFADMSSEEFQ-----TRH 85

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           +        +  P  + +T TE    + N+      + +  DWR +G ++ VK QG C  
Sbjct: 86  NAARHYAAVMARPPKNTKTFTEE---EINAA-----VGQKVDWRLKGAVTPVKNQGSCGS 137

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID--NGGVV 377
           CW+FS  G +E  HAI    L  LS Q+LV CD  + GC+GG MD+A  +++   NG + 
Sbjct: 138 CWSFSTTGNIEGQHAIATGQLVSLSEQELVSCDTVDDGCSGGLMDNAFGWLLSAHNGQIT 197

Query: 378 SDQAYPYKASES-ERGCLVGEEEG-FKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA 435
           ++ +YPY +       C            +  +  IP   E +M  +V   GPLS+G++A
Sbjct: 198 TEASYPYVSGNGIVPACTFNSNSNPVGATITSFHDIPK-TERDMAAFVFKYGPLSIGVDA 256

Query: 436 NGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGEKVEDKVGSSGN 483
           +    Y GG+        ID    + G     S PYWI+KNSW S WGE+   +V    N
Sbjct: 257 SSWQSYIGGILSHCSDVQIDHGVLIVGFDDTASTPYWIIKNSWSSMWGEQGYIRVAKGSN 316

Query: 484 R 484
           +
Sbjct: 317 Q 317



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 30/209 (14%)

Query: 451 RLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLE-LTGVLPSKLSRLATEKLV 507
           RL G   P   VKN  S GS W          S + T ++E    +   +L  L+ ++LV
Sbjct: 121 RLKGAVTP---VKNQGSCGSCW----------SFSTTGNIEGQHAIATGQLVSLSEQELV 167

Query: 508 DCDMSNGGCNGGRMDDALQYIID--NGGVVSDQAYPYKASES-ERGCLVGEEEG-FKVKV 563
            CD  + GC+GG MD+A  +++   NG + ++ +YPY +       C            +
Sbjct: 168 SCDTVDDGCSGGLMDNAFGWLLSAHNGQITTEASYPYVSGNGIVPACTFNSNSNPVGATI 227

Query: 564 KEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIV 623
             +  IP   E +M  +V   GPLS+G++A+    Y GG++      C+    +H ++IV
Sbjct: 228 TSFHDIPK-TERDMAAFVFKYGPLSIGVDASSWQSYIGGILSH----CSDVQIDHGVLIV 282

Query: 624 GYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           G+      D  S PYWI+KNSW S WGE+
Sbjct: 283 GF-----DDTASTPYWIIKNSWSSMWGEQ 306



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 16/163 (9%)

Query: 38  LNSPVTR--FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFF 95
           + +P T   F +F   H + Y+S ++  +R E F  N++KA +  R++   A F  N+F 
Sbjct: 16  MGAPTTEVLFRDFKTTHARNYASADEERKRFEIFAANMKKAAELNRKNP-MATFGPNEFA 74

Query: 96  DLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWR 155
           D+S  + Q        +        +  P  + +T TE    + N+      + +  DWR
Sbjct: 75  DMSSEEFQ-----TRHNAARHYAAVMARPPKNTKTFTEE---EINAA-----VGQKVDWR 121

Query: 156 AEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            +G ++ VK QG C  CW+FS  G +E  HAI    L  LS Q
Sbjct: 122 LKGAVTPVKNQGSCGSCWSFSTTGNIEGQHAIATGQLVSLSEQ 164


>gi|165969032|ref|YP_001650932.1| peptidase [Orgyia leucostigma NPV]
 gi|164663528|gb|ABY65748.1| peptidase [Orgyia leucostigma NPV]
          Length = 328

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 147/295 (49%), Gaps = 38/295 (12%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL-QQ 252
           E  V ++ K Y+   +  +R+  F  N+E+  + ++  + TAV+ +NKF DLS++++  +
Sbjct: 30  ESFVANYQKNYNDDLEKSKRYTIFKDNLEEI-NVKNRLNDTAVYRINKFSDLSKTEIISK 88

Query: 253 LTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
            TGLN  S   +   ++   Q P                        P  FDWR +  ++
Sbjct: 89  YTGLNAPSETTNFCKTIVLDQPPGKG---------------------PLNFDWRQQNKVT 127

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQY 369
            +K QG C  CWAF+ +  +E+ +AI+ +    LS QQL+DCD  + GC GG +  A + 
Sbjct: 128 SIKNQGSCGACWAFATLASIESQYAIRNDRHINLSEQQLIDCDYVDMGCYGGLLHTAFEQ 187

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           +I  GGV  +  YPY     +       ++ F V++K   R     EE++K  +   GP+
Sbjct: 188 MIQMGGVKQEHEYPYAGVNKQCELNDITDDSFVVRIKGCYRYVVVREEKLKDLLRAVGPI 247

Query: 430 SVGMNANGLFYYSGGVID------LNQRL----YGTS--IPYWIVKNSWGSDWGE 472
            + ++A+G+  Y  GVI+      LN  +    YG    +PYW  KN+WG DWGE
Sbjct: 248 PIAIDASGIVNYYKGVINYCENYGLNHAVLLVGYGVDNGVPYWTFKNTWGVDWGE 302



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 9/151 (5%)

Query: 501 LATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFK 560
           L+ ++L+DCD  + GC GG +  A + +I  GGV  +  YPY     +       ++ F 
Sbjct: 161 LSEQQLIDCDYVDMGCYGGLLHTAFEQMIQMGGVKQEHEYPYAGVNKQCELNDITDDSFV 220

Query: 561 VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHAL 620
           V++K   R     EE++K  +   GP+ + ++A+G+  Y  GVI+     C     NHA+
Sbjct: 221 VRIKGCYRYVVVREEKLKDLLRAVGPIPIAIDASGIVNYYKGVIN----YCENYGLNHAV 276

Query: 621 IIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           ++VGYG +       +PYW  KN+WG DWGE
Sbjct: 277 LLVGYGVD-----NGVPYWTFKNTWGVDWGE 302



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 26/159 (16%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL-Q 103
           F +F+ ++ K Y+   +  +R+  F  N+E+     R +  TAV+ +NKF DLS +++  
Sbjct: 29  FESFVANYQKNYNDDLEKSKRYTIFKDNLEEINVKNRLND-TAVYRINKFSDLSKTEIIS 87

Query: 104 QLTGLNLDSTLEDIQPSL---QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
           + TGLN  S   +   ++   Q P                        P  FDWR +  +
Sbjct: 88  KYTGLNAPSETTNFCKTIVLDQPPGKG---------------------PLNFDWRQQNKV 126

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + +K QG C  CWAF+ +  +E+ +AI+ +    LS Q 
Sbjct: 127 TSIKNQGSCGACWAFATLASIESQYAIRNDRHINLSEQQ 165


>gi|125811033|ref|XP_001361727.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
 gi|54636904|gb|EAL26307.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
          Length = 341

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 145/300 (48%), Gaps = 44/300 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEK-AEDYQSEDSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H K Y    +   R + F  N  K A+  Q   +G   F   VNK+ D+   +       
Sbjct: 36  HRKNYQDETEERFRLKIFNENKHKIAKHNQLWATGAVSFKMAVNKYADMLHHEFY----- 90

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              ST+     +L     +   D   +   F S  H   LP+  DWR +G ++ VK+QG 
Sbjct: 91  ---STMNGFNYTLHKQLRN--ADESFKGVTFISPEH-VTLPKQVDWRTKGAVTDVKDQGH 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C  CWAFS+ G +E  H  +   L  LS Q LVDC     N GCNGG MD+A +YI DNG
Sbjct: 145 CGSCWAFSSTGALEGQHYRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNG 204

Query: 375 GVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           G+ ++++YPY+A +      +G +   + GF         IP G E++M + VAT GP++
Sbjct: 205 GIDTEKSYPYEAIDDSCHFNKGTIGATDRGF-------VDIPQGNEKKMAEAVATIGPVA 257

Query: 431 VGMNAN--GLFYYSGGV-----IDLNQRLYGTSI----------PYWIVKNSWGSDWGEK 473
           V ++A+     +YS GV      D     +G  +           YW+VKNSWG+ WG+K
Sbjct: 258 VAIDASHESFQFYSEGVYNEPACDAQNLDHGVLVVGFGTDESGQDYWLVKNSWGTTWGDK 317



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 102/170 (60%), Gaps = 25/170 (14%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +GVL S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +  
Sbjct: 165 SGVLVS----LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDS 220

Query: 549 ----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGG 602
               +G +   + GF         IP G E++M + VAT GP++V ++A+     +YS G
Sbjct: 221 CHFNKGTIGATDRGF-------VDIPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEG 273

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           V   N+  C+ +  +H +++VG+G +E    +   YW+VKNSWG+ WG+K
Sbjct: 274 V--YNEPACDAQNLDHGVLVVGFGTDE----SGQDYWLVKNSWGTTWGDK 317



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 14/185 (7%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK- 75
           + T +I   L    + Q   Y       +  F  +H K Y    +   R + F  N  K 
Sbjct: 1   MRTALILPLLALVAVAQAVSYAEVIQEEWHTFKLEHRKNYQDETEERFRLKIFNENKHKI 60

Query: 76  AEDYQREDSGTAVFE--VNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTE 133
           A+  Q   +G   F+  VNK+ D+   +          ST+     +L     +   D  
Sbjct: 61  AKHNQLWATGAVSFKMAVNKYADMLHHEFY--------STMNGFNYTLHKQLRN--ADES 110

Query: 134 MRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLT 193
            +   F S  H   LP+  DWR +G ++ VK+QG C  CWAFS+ G +E  H  +   L 
Sbjct: 111 FKGVTFISPEH-VTLPKQVDWRTKGAVTDVKDQGHCGSCWAFSSTGALEGQHYRKSGVLV 169

Query: 194 ELSVQ 198
            LS Q
Sbjct: 170 SLSEQ 174


>gi|440906716|gb|ELR56945.1| Cathepsin S, partial [Bos grunniens mutus]
          Length = 342

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC  + 
Sbjct: 126 LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 185

Query: 355 --NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M +A QYIIDN G+ S+ +YPYKA +   G    + +        Y  +P
Sbjct: 186 YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD---GKCQYDVKNRAATCSRYIELP 242

Query: 413 YGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI-------DLNQRL----YGT--SI 457
           +G EE +K+ VA +GP+SVG++A  +  F Y  GV        ++N  +    YG     
Sbjct: 243 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGK 302

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG  +G++
Sbjct: 303 DYWLVKNSWGLHFGDQ 318



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDMS---NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC  +   N GCNGG M +A QYIIDN G+ S+ +YPYKA +   G   
Sbjct: 169 KLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD---GKCQ 225

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLC 611
            + +        Y  +P+G EE +K+ VA +GP+SVG++A  +  F Y  GV       C
Sbjct: 226 YDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGV--YYDPSC 283

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG  + KD     YW+VKNSWG  +G++
Sbjct: 284 TQNV-NHGVLVVGYGNLDGKD-----YWLVKNSWGLHFGDQ 318



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 126 LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQN 177


>gi|354622947|ref|NP_001002938.2| cathepsin S precursor [Canis lupus familiaris]
          Length = 339

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 133/249 (53%), Gaps = 32/249 (12%)

Query: 243 FDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 302
           +DL  + L  +TG  + S    +  SL+ P S  Q +   R+           LP++ DW
Sbjct: 81  YDLGMNHLGDMTGEEVIS----LMGSLRVP-SQWQRNVTYRS------NSNQKLPDSVDW 129

Query: 303 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---SNGGCN 359
           R +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC      N GCN
Sbjct: 130 REKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCN 189

Query: 360 GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEM 419
           GG M  A QYIIDN G+ S+ +YPYKA     G    + +       +Y+ +P+G E+ +
Sbjct: 190 GGFMTTAFQYIIDNNGIDSEASYPYKAMN---GKCRYDSKKRAATCSKYTELPFGSEDAL 246

Query: 420 KKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSIPYWIVKN 464
           K+ VA +GP+SV ++A+    F Y  GV        ++N  +    YG      YW+VKN
Sbjct: 247 KEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGNLNGKDYWLVKN 306

Query: 465 SWGSDWGEK 473
           SWG ++G++
Sbjct: 307 SWGLNFGDQ 315



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 91/161 (56%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDM---SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC      N GCNGG M  A QYIIDN G+ S+ +YPYKA     G   
Sbjct: 166 KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMN---GKCR 222

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
            + +       +Y+ +P+G E+ +K+ VA +GP+SV ++A+    F Y  GV    +  C
Sbjct: 223 YDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGV--YYEPSC 280

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG    KD     YW+VKNSWG ++G++
Sbjct: 281 TQNV-NHGVLVVGYGNLNGKD-----YWLVKNSWGLNFGDQ 315



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 11/105 (10%)

Query: 95  FDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDW 154
           +DL  + L  +TG  + S    +  SL+ P S  Q +   R+           LP++ DW
Sbjct: 81  YDLGMNHLGDMTGEEVIS----LMGSLRVP-SQWQRNVTYRS------NSNQKLPDSVDW 129

Query: 155 RAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           R +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 130 REKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQN 174


>gi|33112581|gb|AAP94046.1| cathepsin-L-like cysteine peptidase 02 [Tenebrio molitor]
          Length = 337

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 157/311 (50%), Gaps = 44/311 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTN---VEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQLTG 255
           H+K Y S  +   R + F+ N   V K     ++   +   G+NK+ D+   + +Q L G
Sbjct: 34  HNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADMLHHEFVQVLNG 93

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
            N            ++   S ++D  +      +++    LP   DWR +G ++ VK+QG
Sbjct: 94  FN----------RTKSGLRSGESDDSVTFLPPANVQ----LPGQIDWRDKGAVTPVKDQG 139

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDN 373
           +C  CW+FSA G +E  H  +   L  LS Q LVDC     N GCNGG MD+A +YI  N
Sbjct: 140 QCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKAN 199

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++QAYPYKA E E+     + +G     + Y  I  G E++++  VAT GP+SV +
Sbjct: 200 GGIDTEQAYPYKA-EDEKCHYKPKNKG--ATDRGYVDIESGNEDKLQSAVATVGPVSVAI 256

Query: 434 NANGLFY--YSGGVI--------DLNQRL----YGT---SIPYWIVKNSWGSDWGEKVED 476
           +A+   +  YSGGV          L+  +    YGT      YW+VKNSWG  WG++   
Sbjct: 257 DASHQSFQLYSGGVYYEPECSPSQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYI 316

Query: 477 KVGSSGNRTRD 487
           K+     R RD
Sbjct: 317 KMA----RNRD 323



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/160 (43%), Positives = 99/160 (61%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD+A +YI  NGG+ ++QAYPYKA E E+     
Sbjct: 163 KLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKANGGIDTEQAYPYKA-EDEKCHYKP 221

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
           + +G     + Y  I  G E++++  VAT GP+SV ++A+   +  YSGGV    +  C+
Sbjct: 222 KNKG--ATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGV--YYEPECS 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           P   +H +++VGYG E+  DGT   YW+VKNSWG  WG++
Sbjct: 278 PSQLDHGVLVVGYGTED--DGTD--YWLVKNSWGKSWGDQ 313



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 18/156 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQR-EDSGTAVFE--VNKFFDLSDSD-LQ 103
           F   H+K Y S  +   R + F+ N      + +    G   F+  +NK+ D+   + +Q
Sbjct: 30  FKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADMLHHEFVQ 89

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            L G N            ++   S ++D  +      +++    LP   DWR +G ++ V
Sbjct: 90  VLNGFN----------RTKSGLRSGESDDSVTFLPPANVQ----LPGQIDWRDKGAVTPV 135

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG+C  CW+FSA G +E  H  +   L  LS Q+
Sbjct: 136 KDQGQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQN 171


>gi|449139100|gb|AGE89905.1| cathepsin-like cysteine proteinase [Spodoptera littoralis NPV]
          Length = 336

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 147/292 (50%), Gaps = 34/292 (11%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           ++ H+K Y++ +       NF  N+    +  +  S  AV+G+NKF     SD+ ++T  
Sbjct: 37  IKQHNKEYTTPDQRDDAFVNFKRNLVNM-NAMNNISNHAVYGINKF-----SDIDKITFA 90

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH----GDDLPEAFDWRAEGVISKVK 312
           N+ + L           + N TD+    ++              PE+FDWR    ++KVK
Sbjct: 91  NVHAGL---------VLTLNATDSNFDPYRLCEFVTVAGPSARTPESFDWRKLHKVTKVK 141

Query: 313 EQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIID 372
           EQG C  CWAF+A+G +E+ +AI  +SL +LS QQL+DCD  + GC+GG M  A Q I+ 
Sbjct: 142 EQGVCGSCWAFAAIGNIESQYAILHDSLIDLSEQQLLDCDRIDQGCDGGLMHLAFQEIMR 201

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
            GGV  +  YPY+    E  C     + F V++    +    +E ++ + +   GP++V 
Sbjct: 202 IGGVEHEIDYPYQG--IEYACRSAPSK-FAVRLSHCYQYDLRDERKLLELLYKNGPIAVA 258

Query: 433 MNANGLFYYSGGVID------LNQRL----YG--TSIPYWIVKNSWGSDWGE 472
           ++   +  Y  G+        LN  +    YG     PYWI KNSWGS+WGE
Sbjct: 259 IDCRDIIDYRSGIATVCNDNGLNHAVLLVGYGIENDTPYWIFKNSWGSNWGE 310



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 12/160 (7%)

Query: 492 GVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
            +L   L  L+ ++L+DCD  + GC+GG M  A Q I+  GGV  +  YPY+    E  C
Sbjct: 163 AILHDSLIDLSEQQLLDCDRIDQGCDGGLMHLAFQEIMRIGGVEHEIDYPYQG--IEYAC 220

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLC 611
                + F V++    +    +E ++ + +   GP++V ++   +  Y  G+      +C
Sbjct: 221 RSAPSK-FAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCRDIIDYRSGI----ATVC 275

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           N    NHA+++VGYG E        PYWI KNSWGS+WGE
Sbjct: 276 NDNGLNHAVLLVGYGIE-----NDTPYWIFKNSWGSNWGE 310



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 19/165 (11%)

Query: 38  LNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDL 97
           ++S    F NF++ H+K Y++ +       NF  N+    +     S  AV+ +NKF   
Sbjct: 26  IDSASVYFENFIKQHNKEYTTPDQRDDAFVNFKRNLVNM-NAMNNISNHAVYGINKF--- 81

Query: 98  SDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH----GDDLPEAFD 153
             SD+ ++T  N+ + L           + N TD+    ++              PE+FD
Sbjct: 82  --SDIDKITFANVHAGL---------VLTLNATDSNFDPYRLCEFVTVAGPSARTPESFD 130

Query: 154 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           WR    ++KVKEQG C  CWAF+A+G +E+ +AI  ++L +LS Q
Sbjct: 131 WRKLHKVTKVKEQGVCGSCWAFAAIGNIESQYAILHDSLIDLSEQ 175


>gi|388517427|gb|AFK46775.1| unknown [Medicago truncatula]
          Length = 362

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 27/301 (8%)

Query: 196 SVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG 255
           S   HDK  SS E L   +E + ++   + +   +     VF  N     + + + +   
Sbjct: 22  SFDFHDKDVSSDESLWDLYERWRSHHTVSRNLNEKQKRFNVFKSNVMHVHNTNKMDKPYK 81

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL-------PEAFDWRAEGVI 308
           L L+   +      +  ++  + +   R F+      G  +       P + DWR +G +
Sbjct: 82  LKLNKFADMTNHEFKTTYAGTKVN-HHRMFRGTPRVSGTFMYENFTKAPASVDWRKKGAV 140

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD-MSNGGCNGGRMDDAL 367
           + VK+QG+C  CWAFS V  VE ++ I+ N L  LS Q+L+DCD   N GCNGG M+ A 
Sbjct: 141 TDVKDQGQCGSCWAFSTVVAVEGINQIKTNRLVPLSEQELIDCDNQENQGCNGGLMEYAF 200

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           +YI   GGV ++  YPY A++    C   +E    V +  +  +P  +E+ + K VA + 
Sbjct: 201 EYIKQKGGVTTESYYPYTANDGS--CDATKENVPTVSIDGHETVPANDEDALLKAVANQ- 257

Query: 428 PLSVGMNANG--LFYYSGGVI------DLNQRL----YGTSIP---YWIVKNSWGSDWGE 472
           P+SV ++A G    +YS GV       +LN  +    YGT++    YWIV+NSWG++WGE
Sbjct: 258 PVSVAIDAGGSDFQFYSEGVFTGDCGKELNHGVAIVGYGTTVDGTNYWIVRNSWGAEWGE 317

Query: 473 K 473
           +
Sbjct: 318 Q 318



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 95/165 (57%), Gaps = 18/165 (10%)

Query: 493 VLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +  ++L  L+ ++L+DCD   N GCNGG M+ A +YI   GGV ++  YPY A++    C
Sbjct: 167 IKTNRLVPLSEQELIDCDNQENQGCNGGLMEYAFEYIKQKGGVTTESYYPYTANDGS--C 224

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI--DLN 607
              +E    V +  +  +P  +E+ + K VA + P+SV ++A G    +YS GV   D  
Sbjct: 225 DATKENVPTVSIDGHETVPANDEDALLKAVANQ-PVSVAIDAGGSDFQFYSEGVFTGDCG 283

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           + L      NH + IVGYG     DGT+  YWIV+NSWG++WGE+
Sbjct: 284 KEL------NHGVAIVGYG--TTVDGTN--YWIVRNSWGAEWGEQ 318



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  ++ +  +R   F +NV    +  + D    + ++NKF D+++ + +      
Sbjct: 44  RSHHTVSRNLNEKQKRFNVFKSNVMHVHNTNKMDKPYKL-KLNKFADMTNHEFK------ 96

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             +T    + +    F    T      F + +       P + DWR +G ++ VK+QG+C
Sbjct: 97  --TTYAGTKVNHHRMFRG--TPRVSGTFMYENFTKA---PASVDWRKKGAVTDVKDQGQC 149

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 150 GSCWAFSTVVAVEGINQIKTNRLVPLSEQ 178


>gi|21593213|gb|AAM65162.1| cysteine proteinase RD19A [Arabidopsis thaliana]
          Length = 368

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 144/300 (48%), Gaps = 51/300 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           KVY+S E+   R   F  N+ +A  +Q  D  +A  GV +F DL+ S+ ++   L + S 
Sbjct: 60  KVYASNEEHDYRFSVFKANLRRARRHQKLDP-SATHGVTQFSDLTRSEFRK-KHLGVRSG 117

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            +  + + +AP    +                 +LPE FDWR  G ++ VK QG C  CW
Sbjct: 118 FKLPKDANKAPILPTE-----------------NLPEDFDWRDHGAVTPVKNQGSCGSCW 160

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDALQYIID 372
           +FSA G +E  + +    L  LS QQLVDCD           + GCNGG M+ A ++ + 
Sbjct: 161 SFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEHTLK 220

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
            GG++ ++ YPY   + +   L  ++      V  +S I   +EE++   +   GPL+V 
Sbjct: 221 TGGLMKEEDYPYTGKDGKTCKL--DKSKIVASVSNFSVISI-DEEQIAANLVKNGPLAVA 277

Query: 433 MNANGLFYYSGGV---IDLNQRL--------YGTS---------IPYWIVKNSWGSDWGE 472
           +NA  +  Y GGV       +RL        YG +          PYWI+KNSWG  WGE
Sbjct: 278 INAGYMQTYIGGVSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGE 337



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 105/219 (47%), Gaps = 33/219 (15%)

Query: 447 DLNQRLYGTSIPYWIVKN--SWGSDWGEKVEDKVGSSGNRTRDLELTGVLPS-KLSRLAT 503
           D + R +G   P   VKN  S GS W          S + T  LE    L + KL  L+ 
Sbjct: 138 DFDWRDHGAVTP---VKNQGSCGSCW----------SFSATGALEGANFLATGKLVSLSE 184

Query: 504 EKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           ++LVDCD           + GCNGG M+ A ++ +  GG++ ++ YPY   + +   L  
Sbjct: 185 QQLVDCDHECDPEEADSCDSGCNGGLMNSAFEHTLKTGGLMKEEDYPYTGKDGKTCKL-- 242

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           ++      V  +S I   +EE++   +   GPL+V +NA  +  Y GGV      +C  +
Sbjct: 243 DKSKIVASVSNFSVISI-DEEQIAANLVKNGPLAVAINAGYMQTYIGGVS--CPYICT-R 298

Query: 615 AQNHALIIVGYGEEEKKDG--TSIPYWIVKNSWGSDWGE 651
             NH +++VGYG            PYWI+KNSWG  WGE
Sbjct: 299 RLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGE 337



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 19/156 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F R   KVY+S E+   R   F  N+ +A  +Q+ D  +A   V +F DL+ S+ +
Sbjct: 50  HFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDP-SATHGVTQFSDLTRSEFR 108

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +   L + S  +  + + +AP    +                 +LPE FDWR  G ++ V
Sbjct: 109 K-KHLGVRSGFKLPKDANKAPILPTE-----------------NLPEDFDWRDHGAVTPV 150

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CW+FSA G +E  + +    L  LS Q 
Sbjct: 151 KNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQ 186


>gi|33112583|gb|AAP94047.1| cathepsin-L-like cysteine peptidase 03 [Tenebrio molitor]
          Length = 337

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 157/311 (50%), Gaps = 44/311 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTN---VEKAEDYQSEDSGTAVFGVNKFFDLSESD-LQQLTG 255
           H+K Y S  +   R + F+ N   V K     ++   +   G+NK+ D+   + +Q L G
Sbjct: 34  HNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADMLHHEFVQVLNG 93

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQG 315
            N            ++   S ++D  +      +++    LP   DWR +G ++ VK+QG
Sbjct: 94  FN----------RTKSGLRSGESDDSVTFLPPANVQ----LPGQIDWRDKGAVTPVKDQG 139

Query: 316 KCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDN 373
           +C  CW+FSA G +E  H  +   L  LS Q LVDC     N GCNGG MD+A +YI  N
Sbjct: 140 QCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKAN 199

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           GG+ ++QAYPYKA E E+     + +G     + Y  I  G E++++  VAT GP+SV +
Sbjct: 200 GGIDTEQAYPYKA-EDEKCHYKPKNKG--ATDRGYVDIESGNEDKLQSAVATVGPVSVAI 256

Query: 434 NANGLFY--YSGGVI--------DLNQRL----YGT---SIPYWIVKNSWGSDWGEKVED 476
           +A+   +  YSGGV          L+  +    YGT      YW+VKNSWG  WG++   
Sbjct: 257 DASHQSFQLYSGGVYYEPDCSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYI 316

Query: 477 KVGSSGNRTRD 487
           K+     R RD
Sbjct: 317 KMA----RNRD 323



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 98/160 (61%), Gaps = 13/160 (8%)

Query: 497 KLSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD+A +YI  NGG+ ++QAYPYKA E E+     
Sbjct: 163 KLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKANGGIDTEQAYPYKA-EDEKCHYKP 221

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCN 612
           + +G     + Y  I  G E++++  VAT GP+SV ++A+   +  YSGGV    +  C+
Sbjct: 222 KNKG--ATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGV--YYEPDCS 277

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
               +H +++VGYG E+  DGT   YW+VKNSWG  WG++
Sbjct: 278 ASQLDHGVLVVGYGTED--DGTD--YWLVKNSWGKSWGDQ 313



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 18/156 (11%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQR-EDSGTAVFE--VNKFFDLSDSD-LQ 103
           F   H+K Y S  +   R + F+ N      + +    G   F+  +NK+ D+   + +Q
Sbjct: 30  FKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADMLHHEFVQ 89

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
            L G N            ++   S ++D  +      +++    LP   DWR +G ++ V
Sbjct: 90  VLNGFN----------RTKSGLRSGESDDSVTFLPPANVQ----LPGQIDWRDKGAVTPV 135

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K+QG+C  CW+FSA G +E  H  +   L  LS Q+
Sbjct: 136 KDQGQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQN 171


>gi|431910221|gb|ELK13294.1| Cathepsin F [Pteropus alecto]
          Length = 458

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 148/293 (50%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  +++ Y + E+   R   F+ N+ +A+  Q+ D GTA +GV KF DL+E + + +   
Sbjct: 165 VITYNRTYETKEEAQWRMSVFINNMMRAQKIQALDRGTARYGVTKFSDLTEEEFRTIY-- 222

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L+  L++++ S + P + + +                  P  +DWR +G ++KVK+QG 
Sbjct: 223 -LNPLLKELR-SKRMPLAMSVSGPA---------------PPEWDWRNKGAVTKVKDQGM 265

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G VE    ++   L  LS Q+LVDCD  +  C GG   +A   I   GG+
Sbjct: 266 CGSCWAFSVTGNVEGQWFLKRGDLLSLSEQELVDCDKLDKACLGGLPSNAYSAIKTLGGL 325

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  Y Y      + C    E+  KV + +   +    E+++  W+A  GP+S+ +NA 
Sbjct: 326 ETEDDYGYNG--HLQTCNFSAEKA-KVYINDSVELSQ-NEQKLAAWLAKNGPISIAINAF 381

Query: 437 GLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           G+ +Y  G+            ID    L G    + IP+W +KNSWG+DWGE+
Sbjct: 382 GMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEE 434



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 9/155 (5%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  +  C GG   +A   I   GG+ ++  Y Y      + C    E+
Sbjct: 289 LLSLSEQELVDCDKLDKACLGGLPSNAYSAIKTLGGLETEDDYGYNGHL--QTCNFSAEK 346

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
             KV + +   +    E+++  W+A  GP+S+ +NA G+ +Y  G+    + LC+P   +
Sbjct: 347 A-KVYINDSVELSQ-NEQKLAAWLAKNGPISIAINAFGMQFYRHGISHPLRPLCSPWLID 404

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           HA+++VGYG       + IP+W +KNSWG+DWGE+
Sbjct: 405 HAVLLVGYGNR-----SDIPFWAIKNSWGTDWGEE 434



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 19/154 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F+  +++ Y + E+   R   F+ N+ +A+  Q  D GTA + V KF DL++ + + 
Sbjct: 161 FKEFVITYNRTYETKEEAQWRMSVFINNMMRAQKIQALDRGTARYGVTKFSDLTEEEFRT 220

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +    L+  L++++ S + P + + +                  P  +DWR +G ++KVK
Sbjct: 221 IY---LNPLLKELR-SKRMPLAMSVSGPA---------------PPEWDWRNKGAVTKVK 261

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +QG C  CWAFS  G VE    ++  +L  LS Q
Sbjct: 262 DQGMCGSCWAFSVTGNVEGQWFLKRGDLLSLSEQ 295


>gi|225458119|ref|XP_002279862.1| PREDICTED: cysteine proteinase RD19a [Vitis vinifera]
 gi|302142581|emb|CBI19784.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 54/301 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQ-LTGLNLDS 260
           K Y++ E+   R   F  N+ +A+ +Q  D  +AV GV +F DL+ ++ ++   GLN   
Sbjct: 61  KTYATPEEHDYRFNVFKANLRRAKRHQLLDP-SAVHGVTQFSDLTPAEFRRDYLGLNPLR 119

Query: 261 TLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACC 320
              D Q   QAP                 +   D+LP  FDWR  G ++ VK QG C  C
Sbjct: 120 FPADAQ---QAP-----------------ILPTDNLPTDFDWRENGAVTPVKNQGNCGSC 159

Query: 321 WAFSAVGVVEAMHAIQGNSLTELSVQQLVDC---------DMSNGGCNGGRMDDALQYII 371
           W+FS +G +E  H +   +L  LS QQLVDC         D  + GCNGG M++A +YI+
Sbjct: 160 WSFSTIGALEGAHFLATGNLESLSEQQLVDCDRECDPEEYDACDDGCNGGLMNNAFEYIL 219

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
             GGV  ++ YPY     +R      E      V  +S +   +E+++   +   GPL+V
Sbjct: 220 KTGGVEREKDYPYTG--RDRSPCKFNESKIVASVSNFSVVSI-DEDQIAANLVKNGPLAV 276

Query: 432 GMNANGLFYYSGGV---------IDLNQRL--YGTS---------IPYWIVKNSWGSDWG 471
           G+NA  +  Y+ GV         +D    L  YG++          PYWI+KNSW   WG
Sbjct: 277 GINAVFMQTYTAGVSCPFLCSGELDHGVLLVGYGSAGYSPIRFKEKPYWILKNSWSKYWG 336

Query: 472 E 472
           E
Sbjct: 337 E 337



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 17/165 (10%)

Query: 498 LSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           L  L+ ++LVDCD           + GCNGG M++A +YI+  GGV  ++ YPY     +
Sbjct: 179 LESLSEQQLVDCDRECDPEEYDACDDGCNGGLMNNAFEYILKTGGVEREKDYPYTG--RD 236

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
           R      E      V  +S +   +E+++   +   GPL+VG+NA  +  Y+ GV     
Sbjct: 237 RSPCKFNESKIVASVSNFSVVSI-DEDQIAANLVKNGPLAVGINAVFMQTYTAGVS--CP 293

Query: 609 RLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGE 651
            LC+ +  +H +++VGYG            PYWI+KNSW   WGE
Sbjct: 294 FLCSGEL-DHGVLLVGYGSAGYSPIRFKEKPYWILKNSWSKYWGE 337



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 22/157 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F     K Y++ E+   R   F  N+ +A+ +Q  D  +AV  V +F DL+ ++ +
Sbjct: 51  HFEKFKARFQKTYATPEEHDYRFNVFKANLRRAKRHQLLDP-SAVHGVTQFSDLTPAEFR 109

Query: 104 Q-LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +   GLN      D Q   QAP                 +   D+LP  FDWR  G ++ 
Sbjct: 110 RDYLGLNPLRFPADAQ---QAP-----------------ILPTDNLPTDFDWRENGAVTP 149

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           VK QG C  CW+FS +G +E  H +   NL  LS Q 
Sbjct: 150 VKNQGNCGSCWSFSTIGALEGAHFLATGNLESLSEQQ 186


>gi|297733654|emb|CBI14901.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 115/193 (59%), Gaps = 19/193 (9%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           +P + DWR +G ++ +K+QG+C  CWAFS V  VE ++ I+ N L  LS Q+LVDCD S 
Sbjct: 39  VPPSVDWRKKGAVTPIKDQGQCGSCWAFSTVVAVEGINHIKTNKLVSLSEQELVDCDTSE 98

Query: 355 NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           N GCNGG M  A ++I + GG+ ++Q+YPY A +    C V +     V +  +  +P  
Sbjct: 99  NQGCNGGLMGYAFEFIKEKGGITTEQSYPYTAEDGT--CDVSKVNSPVVSIDGHETVPPN 156

Query: 415 EEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTSI---PY 459
            E+ + K  A + P+SV ++A G    +YS GV       DL+  +    YGT++    Y
Sbjct: 157 NEDALLKAAANQ-PISVAIDAGGSAFQFYSEGVFAGRCGTDLDHGVAIVGYGTTLDGTKY 215

Query: 460 WIVKNSWGSDWGE 472
           WIVKNSWG+DWGE
Sbjct: 216 WIVKNSWGTDWGE 228



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 90/159 (56%), Gaps = 14/159 (8%)

Query: 496 SKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           +KL  L+ ++LVDCD S N GCNGG M  A ++I + GG+ ++Q+YPY A +    C V 
Sbjct: 81  NKLVSLSEQELVDCDTSENQGCNGGLMGYAFEFIKEKGGITTEQSYPYTAEDGT--CDVS 138

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCN 612
           +     V +  +  +P   E+ + K  A + P+SV ++A G    +YS GV       C 
Sbjct: 139 KVNSPVVSIDGHETVPPNNEDALLKAAANQ-PISVAIDAGGSAFQFYSEGVF---AGRCG 194

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
               +H + IVGYG     DGT   YWIVKNSWG+DWGE
Sbjct: 195 TDL-DHGVAIVGYG--TTLDGTK--YWIVKNSWGTDWGE 228



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 34/51 (66%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +P + DWR +G ++ +K+QG+C  CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 39  VPPSVDWRKKGAVTPIKDQGQCGSCWAFSTVVAVEGINHIKTNKLVSLSEQ 89


>gi|171854651|dbj|BAG16515.1| putative cysteine proteinase [Capsicum chinense]
          Length = 367

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 146/320 (45%), Gaps = 61/320 (19%)

Query: 190 NNLTELSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNK 241
           NN   L+ +HH         K+Y++ E+   R + F  N+ +A  +Q  D  TA  G+ K
Sbjct: 39  NNNHLLNAEHHFSLFKSKFGKIYATQEEHDHRLKVFKANLRRARRHQLLDP-TAEHGITK 97

Query: 242 FFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFD 301
           F DL+ S+ ++ T L L      +  + +AP                      DLPE FD
Sbjct: 98  FSDLTPSEFRR-TYLGLHKPKPKLS-TTKAPILPTS-----------------DLPEDFD 138

Query: 302 WRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-------- 353
           WR +G ++ VK QG C  CW+FS  G VE  H +    L  LS QQLVDCD         
Sbjct: 139 WREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHECDAEQKS 198

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             + GC GG M  A +Y +  GG+  ++ YPY     +  C   ++      V  YS + 
Sbjct: 199 ECDAGCGGGLMTTAFEYTLKAGGLQREKDYPYTGRNGQ--CHF-DKSKIAASVTNYSVVG 255

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV----IDLNQRLYGTSI----------- 457
             +E+++   +   GPL+VG+N+  +  Y GGV    +    + +G  +           
Sbjct: 256 L-DEDQIAANLVKHGPLAVGINSAWMQTYIGGVSCPLVCFKHQDHGVLLVGYGSAGFAPI 314

Query: 458 -----PYWIVKNSWGSDWGE 472
                PYWI+KNSWG  WGE
Sbjct: 315 RLKAKPYWIIKNSWGEHWGE 334



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 18/166 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GC GG M  A +Y +  GG+  ++ YPY     
Sbjct: 176 ELVSLSEQQLVDCDHECDAEQKSECDAGCGGGLMTTAFEYTLKAGGLQREKDYPYTGRNG 235

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +  C   ++      V  YS +   +E+++   +   GPL+VG+N+  +  Y GGV   +
Sbjct: 236 Q--CHF-DKSKIAASVTNYSVVGL-DEDQIAANLVKHGPLAVGINSAWMQTYIGGV---S 288

Query: 608 QRLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGE 651
             L   K Q+H +++VGYG          + PYWI+KNSWG  WGE
Sbjct: 289 CPLVCFKHQDHGVLLVGYGSAGFAPIRLKAKPYWIIKNSWGEHWGE 334



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 20/155 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F     K+Y++ E+   R + F  N+ +A  +Q  D  TA   + KF DL+ S+ +
Sbjct: 49  HFSLFKSKFGKIYATQEEHDHRLKVFKANLRRARRHQLLDP-TAEHGITKFSDLTPSEFR 107

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           + T L L      +  + +AP                      DLPE FDWR +G ++ V
Sbjct: 108 R-TYLGLHKPKPKLS-TTKAPILPTS-----------------DLPEDFDWREKGAVTGV 148

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CW+FS  G VE  H +    L  LS Q
Sbjct: 149 KNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQ 183


>gi|126021|sp|P25775.1|LMCPA_LEIME RecName: Full=Cysteine proteinase A; Flags: Precursor
 gi|9573|emb|CAA44094.1| cysteine proteinase [Leishmania mexicana]
          Length = 354

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 107/189 (56%), Gaps = 16/189 (8%)

Query: 299 AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGC 358
           + DWR +G ++ VK QG C  CWAFSA+G +E   A  G+SL  LS Q LV CD  + GC
Sbjct: 132 SVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCDNIDEGC 191

Query: 359 NGGRMDDALQYIID--NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           NGG MD A+ +I+   NG V ++ +YPY +    R     E E    K+  +  +P+ +E
Sbjct: 192 NGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGE-VGAKITGFLSLPH-DE 249

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRL---YGTSI---------PYWIVKN 464
           E + +WV  RGP++V ++A     Y GGV+ L       +G  I         PYWIVKN
Sbjct: 250 ERIAEWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWSLNHGVLIVGFNKNAKPPYWIVKN 309

Query: 465 SWGSDWGEK 473
           SWGS WGEK
Sbjct: 310 SWGSSWGEK 318



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 89/157 (56%), Gaps = 13/157 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIID--NGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ + LV CD  + GCNGG MD A+ +I+   NG V ++ +YPY +    R     E
Sbjct: 173 LVSLSEQMLVSCDNIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDE 232

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            E    K+  +  +P+ +EE + +WV  RGP++V ++A     Y GGV+ L    C   +
Sbjct: 233 GE-VGAKITGFLSLPH-DEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSL----CLAWS 286

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NH ++IVG+ +  K      PYWIVKNSWGS WGEK
Sbjct: 287 LNHGVLIVGFNKNAKP-----PYWIVKNSWGSSWGEK 318



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 77/189 (40%), Gaps = 32/189 (16%)

Query: 19  TFMIKVALLESNIFQTRGYLNSPVTRFL------NFMRDHDKVYSSVEDLLRRHENFVTN 72
           T +  V    + I QT      PV  F+      +F + H K +    +   R   F  N
Sbjct: 14  TILFVVCYGSALIAQTP----PPVDNFVASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQN 69

Query: 73  VEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDT 132
           ++ A     ++         KF DL+  +  +L  LN D     ++        +++ D 
Sbjct: 70  MQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLY-LNPDYYARHLK--------NHKEDV 120

Query: 133 EMRAFQFNSLRHGDDLPE---AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
            +           D  P    + DWR +G ++ VK QG C  CWAFSA+G +E   A  G
Sbjct: 121 HVD----------DSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASG 170

Query: 190 NNLTELSVQ 198
           ++L  LS Q
Sbjct: 171 HSLVSLSEQ 179


>gi|225427714|ref|XP_002264345.1| PREDICTED: cysteine proteinase RD19a [Vitis vinifera]
          Length = 377

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 152/316 (48%), Gaps = 61/316 (19%)

Query: 195 LSVQHHD---------KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDL 245
           L+  HH          K Y+S E+   R + F  N+ +A  +Q  D  +A  GV +F DL
Sbjct: 55  LTADHHHFSIFKRRFGKSYASQEEHDYRFKVFKANLRRARRHQQLDP-SATHGVTQFSDL 113

Query: 246 SESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
           + ++ +         T   ++P L+ P  + +            +   +DLPE FDWR  
Sbjct: 114 TPAEFR--------GTYLGLRP-LKLPHDAQKA----------PILPTNDLPEDFDWRDH 154

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNG 356
           G ++ VK QG C  CW+FS  G +E  + +   +L  LS QQLV+CD           + 
Sbjct: 155 GAVTAVKNQGSCGSCWSFSTTGALEGANFLATGNLVSLSEQQLVECDHECDPEEMGSCDS 214

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M+ A +Y +  GG++ ++ YPY    ++RG    ++      V  +S I   +E
Sbjct: 215 GCNGGLMNTAFEYTLKAGGLMKEEDYPYTG--TDRGSCKFDKTKIAASVSNFSVISL-DE 271

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV---IDLNQRL--------YGTS--------- 456
           +++   +   GPL+V +NA  +  Y GGV      ++RL        YG++         
Sbjct: 272 DQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICSKRLDHGVLLVGYGSAGYAPIRMKD 331

Query: 457 IPYWIVKNSWGSDWGE 472
            PYWI+KNSWG +WGE
Sbjct: 332 KPYWIIKNSWGENWGE 347



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 89/168 (52%), Gaps = 23/168 (13%)

Query: 498 LSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           L  L+ ++LV+CD           + GCNGG M+ A +Y +  GG++ ++ YPY    ++
Sbjct: 189 LVSLSEQQLVECDHECDPEEMGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYTG--TD 246

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
           RG    ++      V  +S I   +E+++   +   GPL+V +NA  +  Y GGV     
Sbjct: 247 RGSCKFDKTKIAASVSNFSVISL-DEDQIAANLVKNGPLAVAINAVFMQTYVGGVS--CP 303

Query: 609 RLCNPKAQNHALIIVGYGEE-----EKKDGTSIPYWIVKNSWGSDWGE 651
            +C+ K  +H +++VGYG         KD    PYWI+KNSWG +WGE
Sbjct: 304 YICS-KRLDHGVLLVGYGSAGYAPIRMKDK---PYWIIKNSWGENWGE 347



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 20/155 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F R   K Y+S E+   R + F  N+ +A  +Q+ D  +A   V +F DL+ ++ +
Sbjct: 61  HFSIFKRRFGKSYASQEEHDYRFKVFKANLRRARRHQQLDP-SATHGVTQFSDLTPAEFR 119

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                    T   ++P L+ P  + +            +   +DLPE FDWR  G ++ V
Sbjct: 120 --------GTYLGLRP-LKLPHDAQKA----------PILPTNDLPEDFDWRDHGAVTAV 160

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CW+FS  G +E  + +   NL  LS Q
Sbjct: 161 KNQGSCGSCWSFSTTGALEGANFLATGNLVSLSEQ 195


>gi|390368662|ref|XP_780781.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 129/256 (50%), Gaps = 38/256 (14%)

Query: 234 TAVFGVNKFFDL-SESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH 292
           T   G+N+F DL +E  +  +TG  ++ T +  + S   P  SN  D             
Sbjct: 72  TYALGMNQFADLQNEEFVAMMTGFRVNGTSKAAKGSTFLP--SNNVD------------- 116

Query: 293 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD 352
              LP+  DWR +G ++ VK+QG+C  CWAFSA G +E     +   L  LS Q LVDC 
Sbjct: 117 --KLPKTVDWRTKGYVTPVKDQGQCGSCWAFSATGSLEGQQFKKTGKLVSLSEQNLVDCS 174

Query: 353 MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GC+GG MD A QYIID GG+ ++  Y Y+A +   G    ++      V  Y+ + 
Sbjct: 175 YRNYGCHGGFMDRAFQYIIDAGGIDTEATYSYRAVD---GNCHFKKANVGATVTGYTDVT 231

Query: 413 YGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVID----LNQRL--------YGTS-- 456
            G E+ ++K VA  GP+SV ++A+  F  +Y  GV +       RL        YGT+  
Sbjct: 232 SGSEKALQKAVAHIGPISVAIDASHKFFKFYKSGVYNEPGCSTTRLGHAVLVVGYGTTSD 291

Query: 457 -IPYWIVKNSWGSDWG 471
              YWIVKNSW   WG
Sbjct: 292 GTDYWIVKNSWAKTWG 307



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 88/156 (56%), Gaps = 11/156 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ + LVDC   N GC+GG MD A QYIID GG+ ++  Y Y+A +   G    ++
Sbjct: 161 KLVSLSEQNLVDCSYRNYGCHGGFMDRAFQYIIDAGGIDTEATYSYRAVD---GNCHFKK 217

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCNPK 614
                 V  Y+ +  G E+ ++K VA  GP+SV ++A+  F  +Y  GV   N+  C+  
Sbjct: 218 ANVGATVTGYTDVTSGSEKALQKAVAHIGPISVAIDASHKFFKFYKSGV--YNEPGCSTT 275

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
              HA+++VGYG     DGT   YWIVKNSW   WG
Sbjct: 276 RLGHAVLVVGYGTTS--DGTD--YWIVKNSWAKTWG 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 4/103 (3%)

Query: 101 DLQQLT---GLNLDSTLEDIQ-PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           DL   T   G+N  + L++ +  ++   F  N T    +   F    + D LP+  DWR 
Sbjct: 67  DLGHFTYALGMNQFADLQNEEFVAMMTGFRVNGTSKAAKGSTFLPSNNVDKLPKTVDWRT 126

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           +G ++ VK+QG+C  CWAFSA G +E     +   L  LS Q+
Sbjct: 127 KGYVTPVKDQGQCGSCWAFSATGSLEGQQFKKTGKLVSLSEQN 169


>gi|164420679|ref|NP_001037464.2| fibroinase precursor [Bombyx mori]
 gi|40556818|gb|AAR87763.1| fibroinase precursor [Bombyx mori]
          Length = 341

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 158/324 (48%), Gaps = 48/324 (14%)

Query: 180 VVEAMHAIQGNNLTE-----LSVQHHDKVYSSVEDLLR-----RHENFVTNVEKAEDYQS 229
            V A+ A+Q  +L +       +QH     S VED  R      H++ +     A+  Q 
Sbjct: 10  AVAAVSAVQFFDLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHII-----AKHNQK 64

Query: 230 EDSGTAVF--GVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQF 287
            + G   +  G+NK+ D+   +  +        T+     + +   +       +R  +F
Sbjct: 65  YEMGLVSYKLGMNKYGDMLHHEFVK--------TMNGFNKTAKHNKNLYMKGGSVRGAKF 116

Query: 288 NSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQ 347
            S  +   LPE  DWR  G ++ +K+QGKC  CW+FS  G +E  H  Q   L  LS Q 
Sbjct: 117 ISPAN-VKLPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQN 175

Query: 348 LVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKV 405
           L+DC     N GCNGG MD+A +YI DNGG+ ++Q YPY+  + +  C    +      V
Sbjct: 176 LIDCSEQYGNNGCNGGLMDNAFKYIKDNGGIDTEQTYPYEGVDDK--CRYNPKNTGAEDV 233

Query: 406 KEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGV--------IDLNQRL--- 452
             +  IP G+E+++ + VAT GP+SV ++A+   +  YS GV         DL+  +   
Sbjct: 234 G-FVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVV 292

Query: 453 -YGT---SIPYWIVKNSWGSDWGE 472
            YGT    + YW+VKNSWG  WGE
Sbjct: 293 GYGTDEQGVDYWLVKNSWGRSWGE 316



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 94/158 (59%), Gaps = 13/158 (8%)

Query: 498 LSRLATEKLVDCD--MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ + L+DC     N GCNGG MD+A +YI DNGG+ ++Q YPY+  + +  C    
Sbjct: 168 LVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKYIKDNGGIDTEQTYPYEGVDDK--CRYNP 225

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNP 613
           +      V  +  IP G+E+++ + VAT GP+SV ++A+   +  YS GV   N+  C+ 
Sbjct: 226 KNTGAEDVG-FVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGV--YNEEECSS 282

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              +H +++VGYG +E+     + YW+VKNSWG  WGE
Sbjct: 283 TDLDHGVLVVGYGTDEQ----GVDYWLVKNSWGRSWGE 316



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 31/52 (59%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LPE  DWR  G ++ +K+QGKC  CW+FS  G +E  H  Q   L  LS Q+
Sbjct: 124 LPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQN 175


>gi|1223922|gb|AAA92063.1| cysteinyl endopeptidase [Vigna radiata]
          Length = 362

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/194 (39%), Positives = 113/194 (58%), Gaps = 19/194 (9%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-S 354
           +P + DWR +G ++ VK+QG+C  CWAFS V  VE ++ I+ + L  LS Q+LVDCD   
Sbjct: 128 VPASVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTDKLVSLSEQELVDCDKEE 187

Query: 355 NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           N GCNGG M+ A ++I   GG+ ++  YPY A E    C   +     V +  +  +P  
Sbjct: 188 NQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGT--CDASKVNDLAVSIDGHENVPVN 245

Query: 415 EEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTSIP---Y 459
           +E  + K VA + P+SV ++A G    +YS GV+      DLN  +    YGT++    Y
Sbjct: 246 DENALLKAVANQ-PVSVAIDAGGSDFQFYSEGVLTGDCNTDLNHGVAIVGYGTTVDGTNY 304

Query: 460 WIVKNSWGSDWGEK 473
           WIV+NSWG +WGE+
Sbjct: 305 WIVRNSWGPEWGEQ 318



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 90/161 (55%), Gaps = 18/161 (11%)

Query: 497 KLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           KL  L+ ++LVDCD   N GCNGG M+ A ++I   GG+ ++  YPY A E    C   +
Sbjct: 171 KLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGT--CDASK 228

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI--DLNQRLC 611
                V +  +  +P  +E  + K VA + P+SV ++A G    +YS GV+  D N  L 
Sbjct: 229 VNDLAVSIDGHENVPVNDENALLKAVANQ-PVSVAIDAGGSDFQFYSEGVLTGDCNTDL- 286

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH + IVGYG     DGT+  YWIV+NSWG +WGE+
Sbjct: 287 -----NHGVAIVGYG--TTVDGTN--YWIVRNSWGPEWGEQ 318



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  S+ +  +R   F  NV    +  + D    + ++NKF D+++ + +      
Sbjct: 44  RSHHTVSRSLTEKHKRFNVFKENVMHVHNTNKMDKPYKL-KLNKFADMTNHEFR------ 96

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             ST    + +    F   Q       F +  +     +P + DWR +G ++ VK+QG+C
Sbjct: 97  --STYAGSKVNHHKMFRGTQHGN--GTFMYEKV---GSVPASVDWRKKGAVTDVKDQGQC 149

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+ + L  LS Q
Sbjct: 150 GSCWAFSTVVAVEGINQIKTDKLVSLSEQ 178


>gi|449525012|ref|XP_004169515.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 459

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 117/197 (59%), Gaps = 18/197 (9%)

Query: 291 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVD 350
           R GDDLP++ DWRA+G ++ VK+QG C  CWAFS V  VEA++ I    L  LS Q+LVD
Sbjct: 123 RLGDDLPDSIDWRAKGAVAPVKDQGSCGSCWAFSTVASVEAINQIVTGDLIALSEQELVD 182

Query: 351 CDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
           CD S N GCNGG MD A ++II+NGG+ +++ YPY   +S   C+  ++    V +  Y 
Sbjct: 183 CDRSYNEGCNGGLMDYAFEFIIENGGLDTEEDYPYYGFDSS--CIQYKKNAKVVAIDSYE 240

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVI------DLNQRL----YGT-- 455
            +P   E+ ++K V ++  +SV +   G  +  Y  G+       DL+  +    YG+  
Sbjct: 241 DVPVNNEKALQKAV-SKQVVSVAIEGGGRSFQLYQSGIFTGRCGTDLDHGVNVVGYGSEG 299

Query: 456 SIPYWIVKNSWGSDWGE 472
            + YWIV+NSWG  WGE
Sbjct: 300 GVDYWIVRNSWGGSWGE 316



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 15/162 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L  L+ ++LVDCD S N GCNGG MD A ++II+NGG+ +++ YPY   +S   C
Sbjct: 167 IVTGDLIALSEQELVDCDRSYNEGCNGGLMDYAFEFIIENGGLDTEEDYPYYGFDSS--C 224

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQR 609
           +  ++    V +  Y  +P   E+ ++K V ++  +SV +   G  +  Y  G+      
Sbjct: 225 IQYKKNAKVVAIDSYEDVPVNNEKALQKAV-SKQVVSVAIEGGGRSFQLYQSGIF---TG 280

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            C     +H + +VGYG E   D     YWIV+NSWG  WGE
Sbjct: 281 RCGTDL-DHGVNVVGYGSEGGVD-----YWIVRNSWGGSWGE 316



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 39/56 (69%)

Query: 143 RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           R GDDLP++ DWRA+G ++ VK+QG C  CWAFS V  VEA++ I   +L  LS Q
Sbjct: 123 RLGDDLPDSIDWRAKGAVAPVKDQGSCGSCWAFSTVASVEAINQIVTGDLIALSEQ 178


>gi|401419663|ref|XP_003874321.1| cysteine peptidase A (CBA) [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|1706259|sp|P35591.2|CYSP1_LEIPI RecName: Full=Cysteine proteinase 1; AltName: Full=Amastigote
           cysteine proteinase A-1; Flags: Precursor
 gi|1220383|gb|AAA91859.1| cysteine proteinase [Leishmania pifanoi]
 gi|322490556|emb|CBZ25817.1| cysteine peptidase A (CBA) [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 354

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 107/189 (56%), Gaps = 16/189 (8%)

Query: 299 AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGC 358
           + DWR +G ++ VK QG C  CWAFSA+G +E   A  G+SL  LS Q LV CD  + GC
Sbjct: 132 SVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCDNIDEGC 191

Query: 359 NGGRMDDALQYIID--NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           NGG MD A+ +I+   NG V ++ +YPY +    R     E E    K+  +  +P+ +E
Sbjct: 192 NGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGE-VGAKITGFLSLPH-DE 249

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRL---YGTSI---------PYWIVKN 464
           E + +WV  RGP++V ++A     Y GGV+ L       +G  I         PYWIVKN
Sbjct: 250 ERIAEWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWSLNHGVLIVGFNKNAKPPYWIVKN 309

Query: 465 SWGSDWGEK 473
           SWGS WGEK
Sbjct: 310 SWGSSWGEK 318



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 89/157 (56%), Gaps = 13/157 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIID--NGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ + LV CD  + GCNGG MD A+ +I+   NG V ++ +YPY +    R     E
Sbjct: 173 LVSLSEQMLVSCDNIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDE 232

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            E    K+  +  +P+ +EE + +WV  RGP++V ++A     Y GGV+ L    C   +
Sbjct: 233 GE-VGAKITGFLSLPH-DEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSL----CLAWS 286

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NH ++IVG+ +  K      PYWIVKNSWGS WGEK
Sbjct: 287 LNHGVLIVGFNKNAKP-----PYWIVKNSWGSSWGEK 318



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 32/189 (16%)

Query: 19  TFMIKVALLESNIFQTRGYLNSPVTRFL------NFMRDHDKVYSSVEDLLRRHENFVTN 72
           T +  V    + I QT      PV  F+      +F + H K +    +   R   F  N
Sbjct: 14  TILFVVCYGSALIAQTP----PPVDNFVASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQN 69

Query: 73  VEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDT 132
           ++ A     ++         KF DL+  +  +L  LN D     ++         ++ D 
Sbjct: 70  MQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLY-LNPDYYARHLK--------DHKEDV 120

Query: 133 EMRAFQFNSLRHGDDLPE---AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQG 189
            +           D  P    + DWR +G ++ VK QG C  CWAFSA+G +E   A  G
Sbjct: 121 HVD----------DSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASG 170

Query: 190 NNLTELSVQ 198
           ++L  LS Q
Sbjct: 171 HSLVSLSEQ 179


>gi|56682917|gb|AAW21813.1| cysteine protease [Triticum aestivum]
          Length = 377

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 148/316 (46%), Gaps = 47/316 (14%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           VQ   K Y   E+   R   F  N+ +A  +Q  D  +A  GV KF DL+ ++ ++ T L
Sbjct: 57  VQRFGKTYRDAEEHAHRLSVFKANLRRARRHQMLDP-SAEHGVTKFSDLTPAEFRR-TFL 114

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L +T    + S     + +  D  +           D LPE FDWR  G +  VK QG 
Sbjct: 115 GLKTT----RRSFLREMAGSAHDAPVLPT--------DGLPEDFDWRDHGAVGPVKNQGS 162

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDAL 367
           C  CW+FSA G +E  + +    +  LS QQLVDCD           + GCNGG M  A 
Sbjct: 163 CWSCWSFSASGALEGANYLATGKMEVLSEQQLVDCDHECDPAEPDSCDAGCNGGLMTSAF 222

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
            Y++ +GG+  ++ YPY   +   G    E+      V+ +S +   +EE++   +   G
Sbjct: 223 SYLLKSGGLEREKDYPYTGKD---GTCKFEKSKIAASVQNFSVVAV-DEEQIAANLVEYG 278

Query: 428 PLSVGMNANGLFYYSGGV---------IDLNQRL--YGTS---------IPYWIVKNSWG 467
           PL++G+NA  +  Y GGV         +D    L  YG S          PYWI+KNSWG
Sbjct: 279 PLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPSRFKEKPYWIIKNSWG 338

Query: 468 SDWGEKVEDKVGSSGN 483
            +WG+K   K+    N
Sbjct: 339 ENWGDKGYYKICRGSN 354



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 18/167 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           K+  L+ ++LVDCD           + GCNGG M  A  Y++ +GG+  ++ YPY   + 
Sbjct: 185 KMEVLSEQQLVDCDHECDPAEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKD- 243

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    E+      V+ +S +   +EE++   +   GPL++G+NA  +  Y GGV    
Sbjct: 244 --GTCKFEKSKIAASVQNFSVVAV-DEEQIAANLVEYGPLAIGINAAYMQTYIGGVS--C 298

Query: 608 QRLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGEK 652
             +C  +  +H +++VGYG            PYWI+KNSWG +WG+K
Sbjct: 299 PYICG-RHLDHGVLLVGYGASGFAPSRFKEKPYWIIKNSWGENWGDK 344



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 14/156 (8%)

Query: 43  TRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL 102
           ++ L F++   K Y   E+   R   F  N+ +A  +Q  D  +A   V KF DL+ ++ 
Sbjct: 51  SQLLGFVQRFGKTYRDAEEHAHRLSVFKANLRRARRHQMLDP-SAEHGVTKFSDLTPAEF 109

Query: 103 QQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           ++ T L L +T    + S     + +  D  +           D LPE FDWR  G +  
Sbjct: 110 RR-TFLGLKTT----RRSFLREMAGSAHDAPVLPT--------DGLPEDFDWRDHGAVGP 156

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CW+FSA G +E  + +    +  LS Q
Sbjct: 157 VKNQGSCWSCWSFSASGALEGANYLATGKMEVLSEQ 192


>gi|357154164|ref|XP_003576692.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 427

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 140/294 (47%), Gaps = 41/294 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDL--QQLTGLN 257
           H + Y++  +  RR E +  N+   E++ S   G  +   NKF DL+  +   + L GL 
Sbjct: 126 HGRAYANGGEKQRRFEVYKENLALIEEFNSGGHGYTLTD-NKFADLTNEEFRAKMLGGLG 184

Query: 258 LD----STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
            D            +L+ P + N TD                LP+  DWR +G + +VK 
Sbjct: 185 ADPDRRRRARHASNALELPGNDNSTD----------------LPKDVDWRKKGAVVEVKN 228

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDN 373
           QG C  CWAFSAV  +E ++ I+   L  LS Q+LVDCD    GC GG M  A ++++ N
Sbjct: 229 QGSCGSCWAFSAVAAMEGLNQIKNGKLVSLSEQELVDCDAEAVGCAGGFMSWAFEFVMAN 288

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++ +YPYK       C   +     V +  Y  +    E E+ K VA   P+SV +
Sbjct: 289 HGLTTEASYPYKGING--ACQTAKLNESSVSITGYVNVTVNSEAELLK-VAAVQPVSVAV 345

Query: 434 NANGLFY--YSGGVID---LNQRLYGTSI----------PYWIVKNSWGSDWGE 472
           +A G  +  Y+GGV       Q  +G ++           YWIVKNSWG +WGE
Sbjct: 346 DAGGFLFQLYAGGVFSGPCTAQINHGVTVVGYGETDKAEKYWIVKNSWGPEWGE 399



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 13/157 (8%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD    GC GG M  A ++++ N G+ ++ +YPYK       C   + 
Sbjct: 254 KLVSLSEQELVDCDAEAVGCAGGFMSWAFEFVMANHGLTTEASYPYKGING--ACQTAKL 311

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPK 614
               V +  Y  +    E E+ K VA   P+SV ++A G  +  Y+GGV       C  +
Sbjct: 312 NESSVSITGYVNVTVNSEAELLK-VAAVQPVSVAVDAGGFLFQLYAGGVFS---GPCTAQ 367

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             NH + +VGYGE +K +     YWIVKNSWG +WGE
Sbjct: 368 I-NHGVTVVGYGETDKAE----KYWIVKNSWGPEWGE 399



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 23/161 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDL- 102
           RF  +M  H + Y++  +  RR E +  N+   E++     G  + + NKF DL++ +  
Sbjct: 118 RFEQWMGKHGRAYANGGEKQRRFEVYKENLALIEEFNSGGHGYTLTD-NKFADLTNEEFR 176

Query: 103 -QQLTGLNLD----STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 157
            + L GL  D            +L+ P + N TD                LP+  DWR +
Sbjct: 177 AKMLGGLGADPDRRRRARHASNALELPGNDNSTD----------------LPKDVDWRKK 220

Query: 158 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           G + +VK QG C  CWAFSAV  +E ++ I+   L  LS Q
Sbjct: 221 GAVVEVKNQGSCGSCWAFSAVAAMEGLNQIKNGKLVSLSEQ 261


>gi|195153545|ref|XP_002017686.1| GL17172 [Drosophila persimilis]
 gi|194113482|gb|EDW35525.1| GL17172 [Drosophila persimilis]
          Length = 341

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 145/300 (48%), Gaps = 44/300 (14%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEK-AEDYQSEDSGTAVF--GVNKFFDLSESDLQQLTGL 256
           H K Y    +   R + F  N  K A+  Q   +G   F   VNK+ D+   +       
Sbjct: 36  HRKNYQDETEERFRLKIFNENKHKIAKHNQLWATGAVSFKMAVNKYADMLHHEFY----- 90

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
              ST+     +L     +   D   +   F S  H   LP+  DWR +G ++ VK+QG 
Sbjct: 91  ---STMNGFNYTLHKQLRN--ADESFKGVTFISPEH-VTLPKQVDWRTKGAVTDVKDQGH 144

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNG 374
           C  CWAFS+ G +E  H  +   L  LS Q LVDC     N GCNGG MD+A +YI DNG
Sbjct: 145 CGSCWAFSSTGALEGQHYRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNG 204

Query: 375 GVVSDQAYPYKASESE----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           G+ ++++YPY+A +      +G +   + GF         IP G E++M + VAT GP++
Sbjct: 205 GIDTEKSYPYEAIDDSCHFNKGSIGATDRGF-------VDIPQGNEKKMAEAVATIGPVA 257

Query: 431 VGMNAN--GLFYYSGGV-----IDLNQRLYGTSI----------PYWIVKNSWGSDWGEK 473
           V ++A+     +YS GV      D     +G  +           YW+VKNSWG+ WG+K
Sbjct: 258 VAIDASHESFQFYSEGVYNEPACDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDK 317



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 102/170 (60%), Gaps = 25/170 (14%)

Query: 491 TGVLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +GVL S    L+ + LVDC     N GCNGG MD+A +YI DNGG+ ++++YPY+A +  
Sbjct: 165 SGVLVS----LSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDS 220

Query: 549 ----RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGG 602
               +G +   + GF         IP G E++M + VAT GP++V ++A+     +YS G
Sbjct: 221 CHFNKGSIGATDRGF-------VDIPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEG 273

Query: 603 VIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           V   N+  C+ +  +H +++VG+G +E  +     YW+VKNSWG+ WG+K
Sbjct: 274 V--YNEPACDAQNLDHGVLVVGFGTDESGE----DYWLVKNSWGTTWGDK 317



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 14/185 (7%)

Query: 17  LHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEK- 75
           + T +I   L    + Q   Y       +  F  +H K Y    +   R + F  N  K 
Sbjct: 1   MRTALILPLLALVAVAQAVSYAEVIQEEWHTFKLEHRKNYQDETEERFRLKIFNENKHKI 60

Query: 76  AEDYQREDSGTAVFE--VNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTE 133
           A+  Q   +G   F+  VNK+ D+   +          ST+     +L     +   D  
Sbjct: 61  AKHNQLWATGAVSFKMAVNKYADMLHHEFY--------STMNGFNYTLHKQLRN--ADES 110

Query: 134 MRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLT 193
            +   F S  H   LP+  DWR +G ++ VK+QG C  CWAFS+ G +E  H  +   L 
Sbjct: 111 FKGVTFISPEH-VTLPKQVDWRTKGAVTDVKDQGHCGSCWAFSSTGALEGQHYRKSGVLV 169

Query: 194 ELSVQ 198
            LS Q
Sbjct: 170 SLSEQ 174


>gi|297809385|ref|XP_002872576.1| hypothetical protein ARALYDRAFT_489965 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318413|gb|EFH48835.1| hypothetical protein ARALYDRAFT_489965 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 371

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/288 (34%), Positives = 148/288 (51%), Gaps = 33/288 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H KVY SV +  RR   F  N+    +  +E+  +   G+N+F DLS  +  Q+      
Sbjct: 63  HGKVYESVAEKERRLTIFEDNLRFITNRNAENL-SYRLGLNRFADLSLHEYAQIC----- 116

Query: 260 STLEDIQPSLQAPF--SSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
               D +P     F  SSN+  T            GD LP++ DWR EG +++VK+QG+C
Sbjct: 117 -HGADPRPPRNHVFMTSSNRYKTS----------DGDVLPKSVDWRNEGAVTEVKDQGQC 165

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVV 377
             CWAFS VG VE ++ I    L  LS Q L++C+  N GC GG+++ A ++I++NGG+ 
Sbjct: 166 RSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKENNGCGGGKVETAYEFIMNNGGLG 225

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           +D  YPYKA        + +E    V +  Y  +P  +E  + K VA +   +V  +++ 
Sbjct: 226 TDNDYPYKALNGVCNDRL-KENNKNVMIDGYENLPANDESALMKAVAHQPVTAVVDSSSR 284

Query: 438 LF-YYSGGVID------LNQRL----YGT--SIPYWIVKNSWGSDWGE 472
            F  Y+ GV D      LN  +    YGT     YWIV+NS G+ WGE
Sbjct: 285 EFQLYASGVFDGTCGTNLNHGVVVVGYGTENGRDYWIVRNSRGNTWGE 332



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 11/163 (6%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 549
           L  ++  +L  L+ + L++C+  N GC GG+++ A ++I++NGG+ +D  YPYKA     
Sbjct: 180 LNKIVTGELVTLSEQDLINCNKENNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVC 239

Query: 550 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF-YYSGGVIDLNQ 608
              + +E    V +  Y  +P  +E  + K VA +   +V  +++  F  Y+ GV D   
Sbjct: 240 NDRL-KENNKNVMIDGYENLPANDESALMKAVAHQPVTAVVDSSSREFQLYASGVFD--- 295

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             C     NH +++VGYG E  +D     YWIV+NS G+ WGE
Sbjct: 296 GTCGTNL-NHGVVVVGYGTENGRD-----YWIVRNSRGNTWGE 332



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 19/156 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F ++M  H KVY SV +  RR   F  N+    +   E+  +    +N+F DLS  +  Q
Sbjct: 56  FESWMVKHGKVYESVAEKERRLTIFEDNLRFITNRNAENL-SYRLGLNRFADLSLHEYAQ 114

Query: 105 LTGLNLDSTLEDIQPSLQAPF--SSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
           +          D +P     F  SSN+  T            GD LP++ DWR EG +++
Sbjct: 115 IC------HGADPRPPRNHVFMTSSNRYKTS----------DGDVLPKSVDWRNEGAVTE 158

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK+QG+C  CWAFS VG VE ++ I    L  LS Q
Sbjct: 159 VKDQGQCRSCWAFSTVGAVEGLNKIVTGELVTLSEQ 194


>gi|443685370|gb|ELT89004.1| hypothetical protein CAPTEDRAFT_95613, partial [Capitella teleta]
          Length = 295

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 145/284 (51%), Gaps = 40/284 (14%)

Query: 212 RRHENFVTNVEKAEDYQS-EDSGTAVF--GVNKFFDLSESDLQQ-LTGLNLDSTLEDIQP 267
           +R E F  N++K + +    + G + F  G+N+F D+ E +    + G  +++  + ++ 
Sbjct: 6   QRKEVFRNNIKKIQMHNYLHEQGKSPFTMGINQFSDMDEKEFSTIMNGFRMNNRTK-VRD 64

Query: 268 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 327
            L + + S                    +P   DWR +G ++ VK QG+C  CWAFSA+G
Sbjct: 65  HLHSHYISPAIPVS--------------VPAEVDWRKKGYVTPVKNQGQCGSCWAFSAIG 110

Query: 328 VVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYK 385
            +E  H  +   L  LS Q LVDC  S  N GCNGG MD A +YI DN G  ++  YPY+
Sbjct: 111 ALEGQHFRKTGKLVSLSEQNLVDCSKSYGNNGCNGGVMDYAFKYIKDNDGDDTEACYPYE 170

Query: 386 ASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSG 443
           A +   G    + E      + Y+ +P+G E +MK+ VA  GP+SV ++A  +    Y G
Sbjct: 171 AVD---GMCRFKRECVGATCRGYTDLPWGNEVKMKEAVALVGPVSVAIDASHSSFMSYKG 227

Query: 444 GV--------IDLNQRL----YGT--SIPYWIVKNSWGSDWGEK 473
           GV          L+  +    YGT   + YW+VKNSWG+ WG++
Sbjct: 228 GVYVEKECSPYQLDHGVLVVGYGTEQGLDYWLVKNSWGTTWGDQ 271



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 94/160 (58%), Gaps = 14/160 (8%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC  S  N GCNGG MD A +YI DN G  ++  YPY+A +   G    
Sbjct: 122 KLVSLSEQNLVDCSKSYGNNGCNGGVMDYAFKYIKDNDGDDTEACYPYEAVD---GMCRF 178

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLCN 612
           + E      + Y+ +P+G E +MK+ VA  GP+SV ++A  +    Y GGV    ++ C+
Sbjct: 179 KRECVGATCRGYTDLPWGNEVKMKEAVALVGPVSVAIDASHSSFMSYKGGV--YVEKECS 236

Query: 613 PKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           P   +H +++VGYG E+  D     YW+VKNSWG+ WG++
Sbjct: 237 PYQLDHGVLVVGYGTEQGLD-----YWLVKNSWGTTWGDQ 271



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 19/139 (13%)

Query: 64  RRHENFVTNVEKAEDYQR-EDSGTAVFE--VNKFFDLSDSDLQQ-LTGLNLDSTLEDIQP 119
           +R E F  N++K + +    + G + F   +N+F D+ + +    + G  +++  + ++ 
Sbjct: 6   QRKEVFRNNIKKIQMHNYLHEQGKSPFTMGINQFSDMDEKEFSTIMNGFRMNNRTK-VRD 64

Query: 120 SLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVG 179
            L + + S                    +P   DWR +G ++ VK QG+C  CWAFSA+G
Sbjct: 65  HLHSHYISPAIPVS--------------VPAEVDWRKKGYVTPVKNQGQCGSCWAFSAIG 110

Query: 180 VVEAMHAIQGNNLTELSVQ 198
            +E  H  +   L  LS Q
Sbjct: 111 ALEGQHFRKTGKLVSLSEQ 129


>gi|351629615|gb|AEQ54771.1| KDDL-tailed cysteine proteinase CP4 [Coffea canephora]
          Length = 359

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 143/266 (53%), Gaps = 40/266 (15%)

Query: 241 KFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH-------- 292
           K F++ ++++  +  +N     +D    L+    ++ T+ E R F  + ++H        
Sbjct: 58  KRFNVFKANVHHIHKVNQ----KDKPYKLKLNSFADMTNHEFREFYSSKVKHYRMLHGSR 113

Query: 293 ---------GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTEL 343
                     + LP + DWR +G ++ VK QGKC  CWAFS V  VE ++ I+   L  L
Sbjct: 114 ANTGFMHGKTESLPASVDWRKQGAVTGVKNQGKCGSCWAFSTVVGVEGINKIKTGQLVSL 173

Query: 344 SVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKV 403
           S Q+LVDC+  N GCNGG M++A ++I  +GG+ +++ YPYKA +    C   +     V
Sbjct: 174 SEQELVDCETDNEGCNGGLMENAYEFIKKSGGITTERLYPYKARDGS--CDSSKMNAPAV 231

Query: 404 KVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI-------DLNQRL-- 452
            +  +  +P  +E  + K VA + P+SV ++A+G  + +YS GV        +L+  +  
Sbjct: 232 TIDGHEMVPANDENALMKAVANQ-PVSVAIDASGSDMQFYSEGVYAGDSCGNELDHGVAV 290

Query: 453 --YGTSI---PYWIVKNSWGSDWGEK 473
             YGT++    YWIVKNSWG+ WGE+
Sbjct: 291 VGYGTALDGTKYWIVKNSWGTGWGEQ 316



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 111/202 (54%), Gaps = 15/202 (7%)

Query: 456 SIPYWIVKNSWGSDWGEKVEDKVGSSGNRTRDLELTGVLPSK---LSRLATEKLVDCDMS 512
           S+P  +     G+  G K + K GS    +  + + G+   K   L  L+ ++LVDC+  
Sbjct: 125 SLPASVDWRKQGAVTGVKNQGKCGSCWAFSTVVGVEGINKIKTGQLVSLSEQELVDCETD 184

Query: 513 NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 572
           N GCNGG M++A ++I  +GG+ +++ YPYKA +    C   +     V +  +  +P  
Sbjct: 185 NEGCNGGLMENAYEFIKKSGGITTERLYPYKARDGS--CDSSKMNAPAVTIDGHEMVPAN 242

Query: 573 EEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEK 630
           +E  + K VA + P+SV ++A+G  + +YS GV   +   C  +  +H + +VGYG    
Sbjct: 243 DENALMKAVANQ-PVSVAIDASGSDMQFYSEGVYAGDS--CGNEL-DHGVAVVGYG--TA 296

Query: 631 KDGTSIPYWIVKNSWGSDWGEK 652
            DGT   YWIVKNSWG+ WGE+
Sbjct: 297 LDGTK--YWIVKNSWGTGWGEQ 316



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 16/149 (10%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V   + +  +R   F  NV       ++D    + ++N F D+++ + ++     
Sbjct: 44  RSHHTVSRDLSEKRKRFNVFKANVHHIHKVNQKDKPYKL-KLNSFADMTNHEFREFYSSK 102

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
           +              F   +T++               LP + DWR +G ++ VK QGKC
Sbjct: 103 VKHYRMLHGSRANTGFMHGKTES---------------LPASVDWRKQGAVTGVKNQGKC 147

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+   L  LS Q
Sbjct: 148 GSCWAFSTVVGVEGINKIKTGQLVSLSEQ 176


>gi|290560248|pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A
           Tetrafluorophenoxymethyl Ketone Inhibitor
          Length = 221

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 117/202 (57%), Gaps = 15/202 (7%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT L+ Q LV CD ++ 
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLAEQMLVSCDKTDS 61

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           GC+GG M++A ++I+  +NG V ++ +YPY + E                +  +  +P  
Sbjct: 62  GCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ- 120

Query: 415 EEEEMKKWVATRGPLSVGMNANGLFYYSGGVID--LNQRL----------YGTSIPYWIV 462
           +E ++  W+A  GP++V ++A+    Y+GGV+   ++++L           G ++PYWI+
Sbjct: 121 DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQLDHGVLLVGYNDGAAVPYWII 180

Query: 463 KNSWGSDWGEKVEDKVGSSGNR 484
           KNSW + WGE+   ++    N+
Sbjct: 181 KNSWTTQWGEEGYIRIAKGSNQ 202



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 90/157 (57%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ LA + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 45  LTNLAEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 104

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 105 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVM----TSCVSEQ 159

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      DG ++PYWI+KNSW + WGE+
Sbjct: 160 LDHGVLLVGY-----NDGAAVPYWIIKNSWTTQWGEE 191



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT L+ Q
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLAEQ 51


>gi|260656302|pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The
           Vinyl Sulfone Inhibitor Smdc-256047
 gi|260656303|pdb|3HD3|B Chain B, High Resolution Crystal Structure Of Cruzain Bound To The
           Vinyl Sulfone Inhibitor Smdc-256047
          Length = 215

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 117/202 (57%), Gaps = 15/202 (7%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT L+ Q LV CD ++ 
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLAEQMLVSCDKTDS 61

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           GC+GG M++A ++I+  +NG V ++ +YPY + E                +  +  +P  
Sbjct: 62  GCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ- 120

Query: 415 EEEEMKKWVATRGPLSVGMNANGLFYYSGGVID--LNQRL----------YGTSIPYWIV 462
           +E ++  W+A  GP++V ++A+    Y+GGV+   ++++L           G ++PYWI+
Sbjct: 121 DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQLDHGVLLVGYNDGAAVPYWII 180

Query: 463 KNSWGSDWGEKVEDKVGSSGNR 484
           KNSW + WGE+   ++    N+
Sbjct: 181 KNSWTTQWGEEGYIRIAKGSNQ 202



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 90/157 (57%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ LA + LV CD ++ GC+GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 45  LTNLAEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 104

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 105 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVM----TSCVSEQ 159

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            +H +++VGY      DG ++PYWI+KNSW + WGE+
Sbjct: 160 LDHGVLLVGY-----NDGAAVPYWIIKNSWTTQWGEE 191



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT L+ Q
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLAEQ 51


>gi|213514640|ref|NP_001134963.1| Cathepsin S precursor [Salmo salar]
 gi|209155506|gb|ACI33985.1| Cathepsin S precursor [Salmo salar]
 gi|209737594|gb|ACI69666.1| Cathepsin S precursor [Salmo salar]
 gi|223647278|gb|ACN10397.1| Cathepsin S precursor [Salmo salar]
 gi|223673157|gb|ACN12760.1| Cathepsin S precursor [Salmo salar]
          Length = 330

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 156/316 (49%), Gaps = 41/316 (12%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSE---DSGTAVFGVNKFFDLSESDLQQLTGL 256
           H K Y +  + L R E +  N++    +  E   D  T   G+N   D+++ ++ Q    
Sbjct: 34  HGKNYQTEVEELGRREVWERNLQLINLHNLEASMDMHTYDLGMNHMGDMTQEEIAQSFA- 92

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                      SL+ P    +   E  AF  +S   G  +P+ FDWR +G +++VK QG 
Sbjct: 93  -----------SLRVPADLKR---EPSAFVGSS---GAPIPDTFDWREKGYVTEVKMQGS 135

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--MSNGGCNGGRMDDALQYIIDNG 374
           C  CWAFSAVG +E         L ++S Q LVDC     N GCNGG M  A QY+IDN 
Sbjct: 136 CGSCWAFSAVGALEGQLMKTTGKLIDISSQNLVDCSSKYGNKGCNGGFMSQAFQYVIDNQ 195

Query: 375 GVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMN 434
           G+ SDQ+YPYK  + +  C     +       +YS +P G+E  +K+ +AT GP+SV ++
Sbjct: 196 GIDSDQSYPYKGVQQQ--CSYNPAQR-AANCSKYSFLPEGDEGVLKEALATIGPISVAID 252

Query: 435 AN-GLF-YYSGGVID-------LNQRL----YGT--SIPYWIVKNSWGSDWGEKVEDKVG 479
           A   LF +Y  GV +       +N  +    YGT     YW+VKNSW   WG++   ++ 
Sbjct: 253 ATRPLFTFYRSGVYNDPTCTKKINHAVLAVGYGTLGGQDYWLVKNSWSLSWGDQGYIRMS 312

Query: 480 SSGNRTRDLELTGVLP 495
            + +    + L G  P
Sbjct: 313 RNKDNQCGIALYGCYP 328



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 103/198 (52%), Gaps = 25/198 (12%)

Query: 469 DWGEK---VEDKVGSSGNRTRDLELTGVLPSKLSR-------LATEKLVDCD--MSNGGC 516
           DW EK    E K+  S          G L  +L +       ++++ LVDC     N GC
Sbjct: 120 DWREKGYVTEVKMQGSCGSCWAFSAVGALEGQLMKTTGKLIDISSQNLVDCSSKYGNKGC 179

Query: 517 NGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEE 576
           NGG M  A QY+IDN G+ SDQ+YPYK  + +  C     +       +YS +P G+E  
Sbjct: 180 NGGFMSQAFQYVIDNQGIDSDQSYPYKGVQQQ--CSYNPAQR-AANCSKYSFLPEGDEGV 236

Query: 577 MKKWVATRGPLSVGMNAN-GLF-YYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGT 634
           +K+ +AT GP+SV ++A   LF +Y  GV   N   C  K  NHA++ VGYG    +D  
Sbjct: 237 LKEALATIGPISVAIDATRPLFTFYRSGV--YNDPTCTKKI-NHAVLAVGYGTLGGQD-- 291

Query: 635 SIPYWIVKNSWGSDWGEK 652
              YW+VKNSW   WG++
Sbjct: 292 ---YWLVKNSWSLSWGDQ 306



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 12/138 (8%)

Query: 67  ENFVTNVE---KAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNL--DSTLEDIQPSL 121
           +N+ T VE   + E ++R      +  +    D+   DL    G+N   D T E+I  S 
Sbjct: 36  KNYQTEVEELGRREVWERNLQLINLHNLEASMDMHTYDL----GMNHMGDMTQEEIAQSF 91

Query: 122 QAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVV 181
            +         E  AF  +S   G  +P+ FDWR +G +++VK QG C  CWAFSAVG +
Sbjct: 92  ASLRVPADLKREPSAFVGSS---GAPIPDTFDWREKGYVTEVKMQGSCGSCWAFSAVGAL 148

Query: 182 EAMHAIQGNNLTELSVQH 199
           E         L ++S Q+
Sbjct: 149 EGQLMKTTGKLIDISSQN 166


>gi|237637238|gb|ACR07919.1| cysteine proteinase [Trypanosoma cruzi]
          Length = 345

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 15/202 (7%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q LV CD ++ 
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDS 61

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           GC GG M++A ++I+  +NG V ++ +YPY + E                +  +  +P  
Sbjct: 62  GCGGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ- 120

Query: 415 EEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----TSIPYWIV 462
           +E ++  W+A  GP++V ++A+    Y+GGV        +D    L G     ++PYW++
Sbjct: 121 DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWVI 180

Query: 463 KNSWGSDWGEKVEDKVGSSGNR 484
           KNSW + WGE    ++    N+
Sbjct: 181 KNSWTTQWGEDGYIRIAKGSNQ 202



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 45  LTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTS 104

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 105 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 159

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYW++KNSW + WGE
Sbjct: 160 LDHGVLLVGY-----NDSAAVPYWVIKNSWTTQWGE 190



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 51


>gi|358348957|ref|XP_003638507.1| Cysteine proteinase [Medicago truncatula]
 gi|355504442|gb|AES85645.1| Cysteine proteinase [Medicago truncatula]
          Length = 362

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 153/301 (50%), Gaps = 27/301 (8%)

Query: 196 SVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG 255
           S   HDK  SS E L   +E + ++   + +   +     VF  N     + + + +   
Sbjct: 22  SFDFHDKDVSSDESLWDLYERWRSHHTVSRNLNEKQKRFNVFKSNVMHVHNTNKMDKPYK 81

Query: 256 LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL-------PEAFDWRAEGVI 308
           L L+   +      +  ++ ++ +   R F+      G  +       P + DWR +G +
Sbjct: 82  LKLNKFADMTNHEFKTTYAGSKVN-HHRMFRGTPRVSGTFMYENFTKAPASVDWRKKGAV 140

Query: 309 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD-MSNGGCNGGRMDDAL 367
           + VK+QG+C  CWAFS V  VE ++ I+ N L  LS Q+L+DCD   N GCNGG M+ A 
Sbjct: 141 TDVKDQGQCGSCWAFSTVVAVEGINQIKTNRLVPLSEQELIDCDNQENQGCNGGLMEYAF 200

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
           +YI   GG+ ++  YPY A++    C   +E    V +  +  +P  +E+ + K VA + 
Sbjct: 201 EYIKQKGGITTESYYPYTANDGS--CDATKENVPAVSIDGHETVPANDEDALLKAVANQ- 257

Query: 428 PLSVGMNANG--LFYYSGGVI------DLNQRL----YGTSIP---YWIVKNSWGSDWGE 472
           P+SV ++A G    +YS GV       +LN  +    YGT++    YWIV+NSWG++WGE
Sbjct: 258 PVSVAIDAGGSDFQFYSEGVFTGDCGKELNHGVAIVGYGTTVDGTNYWIVRNSWGAEWGE 317

Query: 473 K 473
           +
Sbjct: 318 Q 318



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 95/165 (57%), Gaps = 18/165 (10%)

Query: 493 VLPSKLSRLATEKLVDCD-MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +  ++L  L+ ++L+DCD   N GCNGG M+ A +YI   GG+ ++  YPY A++    C
Sbjct: 167 IKTNRLVPLSEQELIDCDNQENQGCNGGLMEYAFEYIKQKGGITTESYYPYTANDGS--C 224

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI--DLN 607
              +E    V +  +  +P  +E+ + K VA + P+SV ++A G    +YS GV   D  
Sbjct: 225 DATKENVPAVSIDGHETVPANDEDALLKAVANQ-PVSVAIDAGGSDFQFYSEGVFTGDCG 283

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           + L      NH + IVGYG     DGT+  YWIV+NSWG++WGE+
Sbjct: 284 KEL------NHGVAIVGYG--TTVDGTN--YWIVRNSWGAEWGEQ 318



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  ++ +  +R   F +NV    +  + D    + ++NKF D+++ + +      
Sbjct: 44  RSHHTVSRNLNEKQKRFNVFKSNVMHVHNTNKMDKPYKL-KLNKFADMTNHEFK------ 96

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             +T    + +    F    T      F + +       P + DWR +G ++ VK+QG+C
Sbjct: 97  --TTYAGSKVNHHRMFRG--TPRVSGTFMYENFTKA---PASVDWRKKGAVTDVKDQGQC 149

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS V  VE ++ I+ N L  LS Q
Sbjct: 150 GSCWAFSTVVAVEGINQIKTNRLVPLSEQ 178


>gi|343417244|emb|CCD20093.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 454

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 39/293 (13%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTG-- 255
           Q + + Y +  +   R   F  N+ ++  Y + +   A FGV  F DL+  + +      
Sbjct: 39  QKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRTRYHNG 97

Query: 256 -LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
             + ++    ++  +Q P                        P A DW  +G ++ VK+Q
Sbjct: 98  ERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWGRKGAVTPVKDQ 137

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--D 372
           G C  CW+FSA+G +E   A  GN LT LS Q LV CD  + GC GG MD+A ++I+  +
Sbjct: 138 GTCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKEN 197

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
           +G V ++++YPY +   E              +  +  IP+ +E+ + K++A  GP++V 
Sbjct: 198 SGKVYTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPH-DEDAIAKYLADNGPVAVA 256

Query: 433 MNANGLFYYSGGVID------LNQRLY------GTSIPYWIVKNSWGSDWGEK 473
           ++A     YSGGV+       LN  +        +  PYWI+KNSW S WGEK
Sbjct: 257 VDATTFMSYSGGVVTSCTSEALNHGVLLVGYNDSSKPPYWIIKNSWSSSWGEK 309



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD  + GC GG MD+A ++I+  ++G V ++++YPY +   E       
Sbjct: 163 LTSLSEQMLVSCDTKDNGCGGGLMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPR 222

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  IP+ +E+ + K++A  GP++V ++A     YSGGV+      C  +A
Sbjct: 223 GHKVGATITGHVDIPH-DEDAIAKYLADNGPVAVAVDATTFMSYSGGVVTS----CTSEA 277

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NH +++VGY +  K      PYWI+KNSW S WGEK
Sbjct: 278 LNHGVLLVGYNDSSKP-----PYWIIKNSWSSSWGEK 309



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 24/157 (15%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F + + + Y +  +   R   F  N+ ++  Y   +   A F V  F DL+  + + 
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANP-HATFGVTPFSDLTPEEFRT 92

Query: 105 LTG---LNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 161
                  + ++    ++  +Q P                        P A DW  +G ++
Sbjct: 93  RYHNGERHFEAARGRVRTLVQVP--------------------PGKAPAAVDWGRKGAVT 132

Query: 162 KVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            VK+QG C  CW+FSA+G +E   A  GN LT LS Q
Sbjct: 133 PVKDQGTCGSCWSFSAIGNIEGQWAAAGNPLTSLSEQ 169


>gi|30142040|gb|AAN34825.1| cysteine proteinase [Leishmania amazonensis]
 gi|30142042|gb|AAN34826.1| cysteine proteinase [Leishmania amazonensis]
 gi|30142572|gb|AAP21894.1| cysteine proteinase [Leishmania amazonensis]
          Length = 354

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 106/189 (56%), Gaps = 16/189 (8%)

Query: 299 AFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGC 358
           + DWR +G ++ VK QG C  CWAFSA+G +E   A  G+SL  LS Q LV CD  + GC
Sbjct: 132 SVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCDNVDEGC 191

Query: 359 NGGRMDDALQYIID--NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           NGG MD A+ +I+   NG V ++ +YPY +    R     E E    K+  +  +P+ +E
Sbjct: 192 NGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGE-VGAKITGFLSLPH-DE 249

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRL---YGTSI---------PYWIVKN 464
           E +  WV  RGP++V ++A     Y GGV+ L       +G  I         PYWIVKN
Sbjct: 250 ERIADWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWSLNHGVLIVGFNKNAKPPYWIVKN 309

Query: 465 SWGSDWGEK 473
           SWGS WGEK
Sbjct: 310 SWGSSWGEK 318



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 88/157 (56%), Gaps = 13/157 (8%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIID--NGGVVSDQAYPYKASESERGCLVGE 555
           L  L+ + LV CD  + GCNGG MD A+ +I+   NG V ++ +YPY +    R     E
Sbjct: 173 LVSLSEQMLVSCDNVDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDE 232

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
            E    K+  +  +P+ +EE +  WV  RGP++V ++A     Y GGV+ L    C   +
Sbjct: 233 GE-VGAKITGFLSLPH-DEERIADWVEKRGPVAVAVDATTWQLYFGGVVSL----CLAWS 286

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            NH ++IVG+ +  K      PYWIVKNSWGS WGEK
Sbjct: 287 LNHGVLIVGFNKNAKP-----PYWIVKNSWGSSWGEK 318



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 18/182 (9%)

Query: 19  TFMIKVALLESNIFQTRGYLNSPVT--RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKA 76
           T +  V    + I QT   +++ V    + +F + H K +    +   R   F  N++ A
Sbjct: 14  TILFVVCYGSALIAQTPPAVDNFVASAHYGSFKKRHSKAFGGDAEEGHRFNAFKQNMQTA 73

Query: 77  EDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRA 136
                ++         KF DL+  +  +L  LN D             ++S+  D +   
Sbjct: 74  YFLNTQNPHAHYDVSGKFADLTPQEFAKLY-LNPDY------------YTSHLKDHKEDV 120

Query: 137 FQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELS 196
              +S   G     + DWR +G ++ VK QG C  CWAFSA+G +E   A  G++L  LS
Sbjct: 121 HVDDSAPSGV---MSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLS 177

Query: 197 VQ 198
            Q
Sbjct: 178 EQ 179


>gi|224555777|gb|ACN56478.1| cathepsin F [Paralichthys olivaceus]
          Length = 475

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 141/290 (48%), Gaps = 38/290 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           ++KVYSS ++  RR   F  N++ AE  QS D G+A +GV KF DL+E + +  T LN  
Sbjct: 184 YNKVYSSQDEADRRLSIFHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEFRS-TYLN-- 240

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                       P  S  T    R  +  S   G   P ++DWR  G +S VK QG C  
Sbjct: 241 ------------PLLSQWT--LHRPMKPASPAKGP-APASWDWRDHGAVSSVKNQGMCGS 285

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFS  G +E    ++  +L  LS Q+LVDCD  +  CNGG   +A + I   GG+ ++
Sbjct: 286 CWAFSVTGNIEGQWFLKNGTLVSLSEQELVDCDGLDQACNGGLPSNAYEAIEKLGGLETE 345

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
             Y Y   +        +   +     E S+    +E+E+  W+A  GP+SV +NA  + 
Sbjct: 346 TDYSYIGKKQSCDFATKKVAAYINSSVELSK----DEKEIAAWLAENGPVSVALNAFAMQ 401

Query: 440 YYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           +Y  GV            ID    + G      IP+W +KNSWG D+GE+
Sbjct: 402 FYRKGVSHPLKIFCNPWMIDHAVLMVGYGERKGIPFWAIKNSWGEDYGEQ 451



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 9/155 (5%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  +  CNGG   +A + I   GG+ ++  Y Y   +        +  
Sbjct: 306 LVSLSEQELVDCDGLDQACNGGLPSNAYEAIEKLGGLETETDYSYIGKKQSCDFATKKVA 365

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
            +     E S+    +E+E+  W+A  GP+SV +NA  + +Y  GV    +  CNP   +
Sbjct: 366 AYINSSVELSK----DEKEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMID 421

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           HA+++VGYGE +      IP+W +KNSWG D+GE+
Sbjct: 422 HAVLMVGYGERK-----GIPFWAIKNSWGEDYGEQ 451



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 74/155 (47%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  FM  ++KVYSS ++  RR   F  N++ AE  Q  D G+A + V KF DL++ + +
Sbjct: 176 QFKEFMVKYNKVYSSQDEADRRLSIFHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEFR 235

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             T LN              P  S  T    R  +  S   G   P ++DWR  G +S V
Sbjct: 236 S-TYLN--------------PLLSQWT--LHRPMKPASPAKGP-APASWDWRDHGAVSSV 277

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS  G +E    ++   L  LS Q
Sbjct: 278 KNQGMCGSCWAFSVTGNIEGQWFLKNGTLVSLSEQ 312


>gi|51969854|dbj|BAD43619.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 361

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 140/300 (46%), Gaps = 51/300 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           KVY S+E+   R   F  N+ +A  +Q  D  +A  GV +F DL+ S+ ++   L +   
Sbjct: 57  KVYGSIEEHYYRFSVFKANLLRAMRHQKMDP-SARHGVTQFSDLTRSEFRR-KHLGVKGG 114

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            +  + + QAP    Q                 +LPE FDWR  G ++ VK QG C  CW
Sbjct: 115 FKLPKDANQAPILPTQ-----------------NLPEEFDWRDRGAVTPVKNQGSCGSCW 157

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDALQYIID 372
           +FS  G +E  H +    L  LS QQLVDCD           + GCNG  M+ A +Y + 
Sbjct: 158 SFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGRLMNSAFEYTLK 217

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
            GG++ ++ YPY  ++   G    +       V  +S +   E++     +   GPL+V 
Sbjct: 218 TGGLMREKDYPYTGTDG--GSCKLDRSKIVASVSNFSVVSINEDQIAANLIKN-GPLAVA 274

Query: 433 MNANGLFYYSGGV---IDLNQRL--------YGTS---------IPYWIVKNSWGSDWGE 472
           +NA  +  Y GGV      ++RL        YG++          PYWI+KNSWG  WGE
Sbjct: 275 INAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGE 334



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 17/166 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GCNG  M+ A +Y +  GG++ ++ YPY  ++ 
Sbjct: 175 KLVSLSEQQLVDCDHECDPEEEGSCDSGCNGRLMNSAFEYTLKTGGLMREKDYPYTGTDG 234

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    +       V  +S +   E++     +   GPL+V +NA  +  Y GGV    
Sbjct: 235 --GSCKLDRSKIVASVSNFSVVSINEDQIAANLIKN-GPLAVAINAAYMQTYIGGVS--C 289

Query: 608 QRLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ +  NH +++VGYG     +      PYWI+KNSWG  WGE
Sbjct: 290 PYICS-RRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGE 334



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 19/175 (10%)

Query: 25  ALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS 84
            L+   + +T   + S    F  F +   KVY S+E+   R   F  N+ +A  +Q+ D 
Sbjct: 28  VLIRQVVDETEPKVLSSEDHFTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDP 87

Query: 85  GTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRH 144
            +A   V +F DL+ S+ ++   L +    +  + + QAP    Q               
Sbjct: 88  -SARHGVTQFSDLTRSEFRR-KHLGVKGGFKLPKDANQAPILPTQ--------------- 130

Query: 145 GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
             +LPE FDWR  G ++ VK QG C  CW+FS  G +E  H +    L  LS Q 
Sbjct: 131 --NLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQ 183


>gi|118158|sp|P12412.1|CYSEP_VIGMU RecName: Full=Vignain; AltName: Full=Bean endopeptidase; AltName:
           Full=Cysteine proteinase; AltName:
           Full=Sulfhydryl-endopeptidase; Short=SH-EP; Contains:
           RecName: Full=Vignain-1; Contains: RecName:
           Full=Vignain-2; Flags: Precursor
 gi|22062|emb|CAA33753.1| sulfhydryl-pre-endopeptidase (AA -20 to 342) [Vigna mungo]
 gi|22066|emb|CAA36181.1| sulfhydryl-endopeptidase [Vigna mungo]
          Length = 362

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 145/290 (50%), Gaps = 33/290 (11%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H  V  S+ +  +R   F  NV    +    D    +  +NKF D++  + +        
Sbjct: 46  HHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKL-KLNKFADMTNHEFR-------- 96

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
           ST    + +    F  +Q  +    F +  +     +P + DWR +G ++ VK+QG+C  
Sbjct: 97  STYAGSKVNHHKMFRGSQHGS--GTFMYEKV---GSVPASVDWRKKGAVTDVKDQGQCGS 151

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVS 378
           CWAFS +  VE ++ I+ N L  LS Q+LVDCD   N GCNGG M+ A ++I   GG+ +
Sbjct: 152 CWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITT 211

Query: 379 DQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG- 437
           +  YPY A E    C   +     V +  +  +P  +E  + K VA + P+SV ++A G 
Sbjct: 212 ESNYPYTAQEGT--CDESKVNDLAVSIDGHENVPVNDENALLKAVANQ-PVSVAIDAGGS 268

Query: 438 -LFYYSGGVI------DLNQRL----YGTSIP---YWIVKNSWGSDWGEK 473
              +YS GV       DLN  +    YGT++    YWIV+NSWG +WGE+
Sbjct: 269 DFQFYSEGVFTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQ 318



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 18/168 (10%)

Query: 490 LTGVLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESE 548
           +  +  +KL  L+ ++LVDCD   N GCNGG M+ A ++I   GG+ ++  YPY A E  
Sbjct: 164 INQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGT 223

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI-- 604
             C   +     V +  +  +P  +E  + K VA + P+SV ++A G    +YS GV   
Sbjct: 224 --CDESKVNDLAVSIDGHENVPVNDENALLKAVANQ-PVSVAIDAGGSDFQFYSEGVFTG 280

Query: 605 DLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           D N  L      NH + IVGYG     DGT+  YWIV+NSWG +WGE+
Sbjct: 281 DCNTDL------NHGVAIVGYG--TTVDGTN--YWIVRNSWGPEWGEQ 318



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V  S+ +  +R   F  NV    +  + D    + ++NKF D+++ + +      
Sbjct: 44  RSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKL-KLNKFADMTNHEFR------ 96

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
             ST    + +    F  +Q  +    F +  +     +P + DWR +G ++ VK+QG+C
Sbjct: 97  --STYAGSKVNHHKMFRGSQHGS--GTFMYEKV---GSVPASVDWRKKGAVTDVKDQGQC 149

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS +  VE ++ I+ N L  LS Q
Sbjct: 150 GSCWAFSTIVAVEGINQIKTNKLVSLSEQ 178


>gi|410913409|ref|XP_003970181.1| PREDICTED: cathepsin F-like [Takifugu rubripes]
          Length = 476

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 139/289 (48%), Gaps = 38/289 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           +  ++KVYSS E+  RR + F  N++ AE  QS D G+A +GV KF DL+E + + LT L
Sbjct: 182 MTKYNKVYSSQEEADRRLQIFKENLKTAEKIQSLDEGSAEYGVTKFSDLTEEEFR-LTYL 240

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           N              P  S  T   +R     +       P ++DWR  G +S VK QG 
Sbjct: 241 N--------------PLLSQWT---LRRPMKPASPARSPAPASWDWRDHGAVSPVKNQGL 283

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G +E    ++   L  LS Q+LVDCD  +  C GG   +A + I   GG+
Sbjct: 284 CGSCWAFSVTGNIEGQWFLKHGKLLSLSEQELVDCDGLDHACRGGLPSNAYEAIEGLGGL 343

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  Y Y  S  ++ C    E+     +     +P  +E EM  W+A  GP+SV +NA 
Sbjct: 344 EAENDYTY--SGHKQKCSFATEK-VAAYINSSVELP-SDENEMAAWLAENGPVSVALNAF 399

Query: 437 GLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSD 469
            + +Y  GV            ID    L G      IP+W +KNSWG D
Sbjct: 400 AMQFYKKGVSHPWMILCNPWMIDHAVLLVGYGERNGIPFWAIKNSWGED 448



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 9/152 (5%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ ++LVDCD  +  C GG   +A + I   GG+ ++  Y Y  S  ++ C    E
Sbjct: 306 KLLSLSEQELVDCDGLDHACRGGLPSNAYEAIEGLGGLEAENDYTY--SGHKQKCSFATE 363

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQ 616
           +     +     +P  +E EM  W+A  GP+SV +NA  + +Y  GV      LCNP   
Sbjct: 364 K-VAAYINSSVELP-SDENEMAAWLAENGPVSVALNAFAMQFYKKGVSHPWMILCNPWMI 421

Query: 617 NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSD 648
           +HA+++VGYGE        IP+W +KNSWG D
Sbjct: 422 DHAVLLVGYGER-----NGIPFWAIKNSWGED 448



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 18/154 (11%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  FM  ++KVYSS E+  RR + F  N++ AE  Q  D G+A + V KF DL++ + + 
Sbjct: 178 FKEFMTKYNKVYSSQEEADRRLQIFKENLKTAEKIQSLDEGSAEYGVTKFSDLTEEEFR- 236

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           LT LN              P  S  T   +R     +       P ++DWR  G +S VK
Sbjct: 237 LTYLN--------------PLLSQWT---LRRPMKPASPARSPAPASWDWRDHGAVSPVK 279

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG C  CWAFS  G +E    ++   L  LS Q
Sbjct: 280 NQGLCGSCWAFSVTGNIEGQWFLKHGKLLSLSEQ 313


>gi|397517049|ref|XP_003828732.1| PREDICTED: cathepsin F [Pan paniscus]
          Length = 379

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 152/293 (51%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  +++ Y S E+   R   FV N+ +A+  Q+ D GTA +GV KF DL+E + + +  L
Sbjct: 86  VITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIY-L 144

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           N              P    +   +M+  Q  S+  GD  P  +DWR++G ++KVK+QG 
Sbjct: 145 N--------------PLLRKEPGNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVKDQGM 186

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G VE    +   +L  LS Q+L+DCD  +  C GG   +A   I + GG+
Sbjct: 187 CGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGL 246

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  Y Y+     + C    E+  KV + + S +    E+++  W+A RGP+SV +NA 
Sbjct: 247 ETEDDYSYQG--HMQSCNFSAEKA-KVYIND-SVVLSQNEQKLAAWLAKRGPISVAINAF 302

Query: 437 GLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           G+ +Y  G+            ID    L G    + +P+W +KNSWG+DWGEK
Sbjct: 303 GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEK 355



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 9/145 (6%)

Query: 508 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 567
           DCD  +  C GG   +A   I + GG+ ++  Y Y+     + C    E+  KV + + S
Sbjct: 220 DCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHM--QSCNFSAEKA-KVYIND-S 275

Query: 568 RIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE 627
            +    E+++  W+A RGP+SV +NA G+ +Y  G+    + LC+P   +HA+++VGYG 
Sbjct: 276 VVLSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGN 335

Query: 628 EEKKDGTSIPYWIVKNSWGSDWGEK 652
                 + +P+W +KNSWG+DWGEK
Sbjct: 336 R-----SDVPFWAIKNSWGTDWGEK 355



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 19/138 (13%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F NF+  +++ Y S E+   R   FV N+ +A+  Q  D GTA + V KF DL++ + + 
Sbjct: 82  FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 141

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +  LN              P    +   +M+  Q  S+  GD  P  +DWR++G ++KVK
Sbjct: 142 IY-LN--------------PLLRKEPGNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVK 182

Query: 165 EQGKCACCWAFSAVGVVE 182
           +QG C  CWAFS  G VE
Sbjct: 183 DQGMCGSCWAFSVTGNVE 200


>gi|308808478|ref|XP_003081549.1| Cysteine proteinase Cathepsin F (ISS) [Ostreococcus tauri]
 gi|116060014|emb|CAL56073.1| Cysteine proteinase Cathepsin F (ISS), partial [Ostreococcus tauri]
          Length = 293

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 141/282 (50%), Gaps = 51/282 (18%)

Query: 223 KAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM 282
           +A   Q+ D G+A  GV +F DL+  +  +         L  ++ S     S ++     
Sbjct: 5   RAATQQANDRGSAKHGVTRFSDLTPEEFAE-------RYLGHVKLS-----SEHREKVRA 52

Query: 283 RAFQFNSL--RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSL 340
           R      L  +H   LP  FDWR +G +S+VK+QG+C  CW FS  G +E  H I    L
Sbjct: 53  RGGVIEDLPTKH---LPAEFDWRFKGAVSRVKDQGQCGSCWTFSTTGAIEGAHFISTGKL 109

Query: 341 TELSVQQLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESER 391
            ELS QQL+DCD+          + GCNGG   +A++YI+++GG+ ++++YPY     E+
Sbjct: 110 VELSEQQLLDCDVGCDPDVPNACDSGCNGGLPSNAMEYIVEHGGIDTEKSYPYVG---EK 166

Query: 392 GCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGV------ 445
           G    +E      +K +S +   +E++M   +   GPLS+G+NA  +  Y GGV      
Sbjct: 167 GECKADEGTLGATLKNFSYVS-SDEKQMAAALVKHGPLSIGINAAWMQTYIGGVACPWLC 225

Query: 446 ----IDLNQRL--YGTSI---------PYWIVKNSWGSDWGE 472
               +D    +  YG+S          PYWIVKNSW   WGE
Sbjct: 226 DSEALDHGVLIVGYGSSGFAPVRWQQEPYWIVKNSWSPAWGE 267



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 17/166 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++L+DCD+          + GCNGG   +A++YI+++GG+ ++++YPY     
Sbjct: 108 KLVELSEQQLLDCDVGCDPDVPNACDSGCNGGLPSNAMEYIVEHGGIDTEKSYPYVG--- 164

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           E+G    +E      +K +S +   +E++M   +   GPLS+G+NA  +  Y GGV    
Sbjct: 165 EKGECKADEGTLGATLKNFSYVS-SDEKQMAAALVKHGPLSIGINAAWMQTYIGGVA--C 221

Query: 608 QRLCNPKAQNHALIIVGYGEE--EKKDGTSIPYWIVKNSWGSDWGE 651
             LC+ +A +H ++IVGYG            PYWIVKNSW   WGE
Sbjct: 222 PWLCDSEALDHGVLIVGYGSSGFAPVRWQQEPYWIVKNSWSPAWGE 267



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 17/126 (13%)

Query: 75  KAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEM 134
           +A   Q  D G+A   V +F DL+  +  +         L  ++ S     S ++     
Sbjct: 5   RAATQQANDRGSAKHGVTRFSDLTPEEFAE-------RYLGHVKLS-----SEHREKVRA 52

Query: 135 RAFQFNSL--RHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNL 192
           R      L  +H   LP  FDWR +G +S+VK+QG+C  CW FS  G +E  H I    L
Sbjct: 53  RGGVIEDLPTKH---LPAEFDWRFKGAVSRVKDQGQCGSCWTFSTTGAIEGAHFISTGKL 109

Query: 193 TELSVQ 198
            ELS Q
Sbjct: 110 VELSEQ 115


>gi|67773378|gb|AAY81946.1| cysteine protease 8 [Paragonimus westermani]
          Length = 325

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 151/320 (47%), Gaps = 50/320 (15%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
            C +A + V V +         L E   + + K Y++ ED  +R   F  N+ +A+ YQ 
Sbjct: 14  GCSFAVNTVRVPD-----NARELYEQFKRDYGKAYAN-EDDQKRFAIFKDNLVRAQQYQM 67

Query: 230 EDSGTAVFGVNKFFDLSESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFN 288
           ++ GTA +GV +F DL+  + + +  GL +D  ++ +Q                     N
Sbjct: 68  QEQGTAKYGVTQFSDLTPEEFEAKYLGLRIDEQVDRVQ--------------------LN 107

Query: 289 SLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
            L+     P + DWR +G +  ++ QG C  CWAFS VG +E    ++   L  LS QQL
Sbjct: 108 DLQTA---PASVDWREKGAVGPIENQGSCGSCWAFSVVGNIEGQWFLKTGYLVSLSKQQL 164

Query: 349 VDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEY 408
           VDCD  + GC GG      + I   GG+     YPY       GC +   + F  K+ + 
Sbjct: 165 VDCDTVDNGCYGGYPPYTYKEIKRMGGLELQSDYPYTG--WGHGCRLDRSKLF-AKIDD- 220

Query: 409 SRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRL--------------YG 454
           S +   +EE+   W+A  GP+S  +NA  L +Y  G++  ++ +              Y 
Sbjct: 221 SIVLEADEEKQAAWLAEHGPMSTCLNAKYLQFYQSGILHPSKAMCSPEGLNHAVLTVGYD 280

Query: 455 TS--IPYWIVKNSWGSDWGE 472
           T   IPYWI+KNSWG+ WGE
Sbjct: 281 TKHGIPYWIIKNSWGTSWGE 300



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 9/154 (5%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  + GC GG      + I   GG+     YPY       GC +   +
Sbjct: 156 LVSLSKQQLVDCDTVDNGCYGGYPPYTYKEIKRMGGLELQSDYPYTGWG--HGCRLDRSK 213

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
            F  K+ + S +   +EE+   W+A  GP+S  +NA  L +Y  G++  ++ +C+P+  N
Sbjct: 214 LF-AKIDD-SIVLEADEEKQAAWLAEHGPMSTCLNAKYLQFYQSGILHPSKAMCSPEGLN 271

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           HA++ VGY   + K G  IPYWI+KNSWG+ WGE
Sbjct: 272 HAVLTVGY---DTKHG--IPYWIIKNSWGTSWGE 300



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 25/156 (16%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ- 103
           +  F RD+ K Y++ ED  +R   F  N+ +A+ YQ ++ GTA + V +F DL+  + + 
Sbjct: 32  YEQFKRDYGKAYAN-EDDQKRFAIFKDNLVRAQQYQMQEQGTAKYGVTQFSDLTPEEFEA 90

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +  GL +D  ++ +Q                     N L+     P + DWR +G +  +
Sbjct: 91  KYLGLRIDEQVDRVQ--------------------LNDLQTA---PASVDWREKGAVGPI 127

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           + QG C  CWAFS VG +E    ++   L  LS Q 
Sbjct: 128 ENQGSCGSCWAFSVVGNIEGQWFLKTGYLVSLSKQQ 163


>gi|255211|gb|AAB23202.1| cathepsin S [cattle, spleen, Peptide Partial, 217 aa]
 gi|227966|prf||1714236A cathepsin S
          Length = 217

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 115/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS- 354
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q LVDC  + 
Sbjct: 1   LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 60

Query: 355 --NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M +A QYIIDN G+ S+ +YPYKA + +  C   + +        Y  +P
Sbjct: 61  YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGK--CQY-DVKNRAATCSRYIELP 117

Query: 413 YGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVI-------DLNQRL----YGT--SI 457
           +G EE +K+ VA +GP+SVG++A  +  F Y  GV        ++N  +    YG     
Sbjct: 118 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGK 177

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG  +G++
Sbjct: 178 DYWLVKNSWGLHFGDQ 193



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 93/161 (57%), Gaps = 16/161 (9%)

Query: 497 KLSRLATEKLVDCDMS---NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLV 553
           KL  L+ + LVDC  +   N GCNGG M +A QYIIDN G+ S+ +YPYKA + +  C  
Sbjct: 44  KLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGK--CQY 101

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNA--NGLFYYSGGVIDLNQRLC 611
            + +        Y  +P+G EE +K+ VA +GP+SVG++A  +  F Y  GV       C
Sbjct: 102 -DVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGV--YYDPSC 158

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
                NH +++VGYG  + KD     YW+VKNSWG  +G++
Sbjct: 159 TQNV-NHGVLVVGYGNLDGKD-----YWLVKNSWGLHFGDQ 193



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 35/52 (67%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C  CWAFSAVG +EA   ++   L  LS Q+
Sbjct: 1   LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQN 52


>gi|186688051|gb|ACC86111.1| cathepsin F [Paralichthys olivaceus]
          Length = 475

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 141/290 (48%), Gaps = 38/290 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           ++KVYSS ++  RR   F  N++ AE  QS D G+A +GV KF DL+E + +  T LN  
Sbjct: 184 YNKVYSSQDEADRRLSIFHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEFRS-TYLN-- 240

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
                       P  S  T    R  +  S   G   P ++DWR  G +S VK QG C  
Sbjct: 241 ------------PLLSQWT--LHRPMKPASPAKGP-APASWDWRDHGAVSSVKNQGMCGS 285

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSD 379
           CWAFS  G +E    ++  +L  LS Q+LVDCD  +  CNGG   +A + I   GG+ ++
Sbjct: 286 CWAFSVTGNIEGQWFLKNGTLVSLSEQELVDCDGLDQACNGGLPSNAYEAIEKLGGLETE 345

Query: 380 QAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF 439
             Y Y   +        +   +     E S+    +E+E+  W+A  GP+SV +NA  + 
Sbjct: 346 TDYSYIGKKQSCDFATKKVAAYINSSVELSK----DEKEIAAWLAENGPVSVALNAFAMQ 401

Query: 440 YYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           +Y  GV            ID    + G      IP+W +KNSWG D+GE+
Sbjct: 402 FYRKGVSHPLKIFCNPWMIDHAVLMVGYGERKGIPFWAIKNSWGEDYGEQ 451



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 9/155 (5%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L  L+ ++LVDCD  +  CNGG   +A + I   GG+ ++  Y Y   +        +  
Sbjct: 306 LVSLSEQELVDCDGLDQACNGGLPSNAYEAIEKLGGLETETDYSYIGKKQSCDFATKKVA 365

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
            +     E S+    +E+E+  W+A  GP+SV +NA  + +Y  GV    +  CNP   +
Sbjct: 366 AYINSSVELSK----DEKEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMID 421

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           HA+++VGYGE +      IP+W +KNSWG D+GE+
Sbjct: 422 HAVLMVGYGERK-----GIPFWAIKNSWGEDYGEQ 451



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 74/155 (47%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  FM  ++KVYSS ++  RR   F  N++ AE  Q  D G+A + V KF DL++ + +
Sbjct: 176 QFKEFMVKYNKVYSSQDEADRRLSIFHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEFR 235

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
             T LN              P  S  T    R  +  S   G   P ++DWR  G +S V
Sbjct: 236 S-TYLN--------------PLLSQWT--LHRPMKPASPAKGP-APASWDWRDHGAVSSV 277

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K QG C  CWAFS  G +E    ++   L  LS Q
Sbjct: 278 KNQGMCGSCWAFSVTGNIEGQWFLKNGTLVSLSEQ 312


>gi|18141287|gb|AAL60581.1|AF454959_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 368

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 144/300 (48%), Gaps = 51/300 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           KVY+S E+   R   F +N+ +A  +Q  D  +A  GV +F DL+ S+ ++   L +   
Sbjct: 60  KVYASREEHDYRFSVFKSNLRRARRHQKLDP-SARHGVTQFSDLTRSEFKR-KHLGVKGG 117

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            +  + + +AP    +                 +LPE FDWR  G ++ VK QG C  CW
Sbjct: 118 FKLPKDANKAPILPTE-----------------NLPEEFDWRERGAVTPVKNQGSCGSCW 160

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDALQYIID 372
           +FSA G +E  + +    L  LS QQLVDCD           + GCNGG M+ A +Y + 
Sbjct: 161 SFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLK 220

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
            GG++ ++ YPY   +     L  ++      V  +S I   +EE++   +   GPL+V 
Sbjct: 221 TGGLMREEDYPYTGKDGATCKL--DKSKIVASVSNFSVISI-DEEQIAANLVKNGPLAVA 277

Query: 433 MNANGLFYYSGGVI-------DLNQRL----YGTS---------IPYWIVKNSWGSDWGE 472
           +NA  +  Y GGV         LN  +    YG++          PYWI+KNSWG  WGE
Sbjct: 278 INAAYMQTYIGGVSCPYICMRRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGETWGE 337



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 84/166 (50%), Gaps = 17/166 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GCNGG M+ A +Y +  GG++ ++ YPY   + 
Sbjct: 178 KLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGKDG 237

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
               L  ++      V  +S I   +EE++   +   GPL+V +NA  +  Y GGV    
Sbjct: 238 ATCKL--DKSKIVASVSNFSVISI-DEEQIAANLVKNGPLAVAINAAYMQTYIGGVS--C 292

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDG--TSIPYWIVKNSWGSDWGE 651
             +C  +  NH +++VGYG            PYWI+KNSWG  WGE
Sbjct: 293 PYICM-RRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGETWGE 337



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 19/155 (12%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F  F +   KVY+S E+   R   F +N+ +A  +Q+ D  +A   V +F DL+ S+ ++
Sbjct: 51  FSLFKKKFGKVYASREEHDYRFSVFKSNLRRARRHQKLDP-SARHGVTQFSDLTRSEFKR 109

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
              L +    +  + + +AP    +                 +LPE FDWR  G ++ VK
Sbjct: 110 -KHLGVKGGFKLPKDANKAPILPTE-----------------NLPEEFDWRERGAVTPVK 151

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG C  CW+FSA G +E  + +    L  LS Q 
Sbjct: 152 NQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQ 186


>gi|390337645|ref|XP_001199228.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/244 (36%), Positives = 127/244 (52%), Gaps = 24/244 (9%)

Query: 249 DLQQLT---GLNLDSTLEDIQ-PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 304
           DL   T   G+N  + L++ +  ++   F  N T    +   F    +   LP+  DWR 
Sbjct: 67  DLGHFTYDLGMNQFADLQNKEFVAMMTGFRVNGTSKAAKGSTFLPPNNVGKLPKTVDWRT 126

Query: 305 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMD 364
           +G ++ VK+QG+C  CWAFSA G +E  H  +   L  LS Q LVDC   N GCNGG MD
Sbjct: 127 KGYVTPVKDQGQCGSCWAFSATGSLEGQHFKKTGKLVSLSEQNLVDCSDKNYGCNGGLMD 186

Query: 365 DALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVA 424
            A QYIID GG+ ++++YPY A +   G    +       V  Y+ +  G E+ ++K VA
Sbjct: 187 RAFQYIIDAGGIDTEESYPYIAMD---GNCHFKTANVGATVTGYTDVTSGSEKALQKAVA 243

Query: 425 TRGPLSVGMNANGLFY--YSGGVID--------LNQRL----YGTSI---PYWIVKNSWG 467
             GP+SV ++A+   +  Y  GV +        L+  +    YGT+I    YWIVKNSW 
Sbjct: 244 HIGPISVAIDASHFSFQLYQSGVYNEPGCSSTLLDHGVLAVGYGTTIDGTDYWIVKNSWA 303

Query: 468 SDWG 471
             WG
Sbjct: 304 ETWG 307



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 87/156 (55%), Gaps = 11/156 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ + LVDC   N GCNGG MD A QYIID GG+ ++++YPY A +   G    + 
Sbjct: 161 KLVSLSEQNLVDCSDKNYGCNGGLMDRAFQYIIDAGGIDTEESYPYIAMD---GNCHFKT 217

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRLCNPK 614
                 V  Y+ +  G E+ ++K VA  GP+SV ++A+   +  Y  GV   N+  C+  
Sbjct: 218 ANVGATVTGYTDVTSGSEKALQKAVAHIGPISVAIDASHFSFQLYQSGV--YNEPGCSST 275

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWG 650
             +H ++ VGYG     DGT   YWIVKNSW   WG
Sbjct: 276 LLDHGVLAVGYG--TTIDGTD--YWIVKNSWAETWG 307



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 22/174 (12%)

Query: 101 DLQQLT---GLNLDSTLEDIQ-PSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRA 156
           DL   T   G+N  + L++ +  ++   F  N T    +   F    +   LP+  DWR 
Sbjct: 67  DLGHFTYDLGMNQFADLQNKEFVAMMTGFRVNGTSKAAKGSTFLPPNNVGKLPKTVDWRT 126

Query: 157 EGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH----HDKVYSSVEDLLR 212
           +G ++ VK+QG+C  CWAFSA G +E  H  +   L  LS Q+     DK Y     L+ 
Sbjct: 127 KGYVTPVKDQGQCGSCWAFSATGSLEGQHFKKTGKLVSLSEQNLVDCSDKNYGCNGGLMD 186

Query: 213 RHENFVTN---VEKAEDY-----------QSEDSGTAVFGVNKFFDLSESDLQQ 252
           R   ++ +   ++  E Y           ++ + G  V G       SE  LQ+
Sbjct: 187 RAFQYIIDAGGIDTEESYPYIAMDGNCHFKTANVGATVTGYTDVTSGSEKALQK 240


>gi|297824991|ref|XP_002880378.1| hypothetical protein ARALYDRAFT_481008 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326217|gb|EFH56637.1| hypothetical protein ARALYDRAFT_481008 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 360

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 139/300 (46%), Gaps = 51/300 (17%)

Query: 202 KVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLDST 261
           K Y S+E+   R   F  N+ +A  +Q  D  +A  GV +F DL+ S+ ++   L +   
Sbjct: 56  KDYGSIEEHYYRFSVFKANLRRAMRHQKMDP-SARHGVTQFSDLTGSEFRR-KHLGVTGG 113

Query: 262 LEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCW 321
            +  + + QAP                      +LPE FDWR  G ++ VK QG C  CW
Sbjct: 114 FKLPKDANQAPILPTH-----------------NLPEEFDWRDRGAVTPVKNQGSCGSCW 156

Query: 322 AFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGGCNGGRMDDALQYIID 372
           +FS  G +E  H +    L  LS QQLVDCD           + GCNGG M+ A +Y + 
Sbjct: 157 SFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLK 216

Query: 373 NGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVG 432
            GG++ ++ YPY  ++   G    +       V  +S +   E++     V   GPL+V 
Sbjct: 217 TGGLMREEDYPYTGTDG--GSCKLDRSKIVASVSNFSVVSINEDQIAANLVKN-GPLAVA 273

Query: 433 MNANGLFYYSGGV---IDLNQRL--------YGTS---------IPYWIVKNSWGSDWGE 472
           +NA  +  Y GGV      ++RL        YG+S          PYWI+KNSWG  WGE
Sbjct: 274 INAAYMQTYIGGVSCPYICSRRLNHGVLLMGYGSSGYSQARLKEKPYWIIKNSWGESWGE 333



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 17/166 (10%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           KL  L+ ++LVDCD           + GCNGG M+ A +Y +  GG++ ++ YPY  ++ 
Sbjct: 174 KLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGTDG 233

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    +       V  +S +   E++     V   GPL+V +NA  +  Y GGV    
Sbjct: 234 --GSCKLDRSKIVASVSNFSVVSINEDQIAANLVKN-GPLAVAINAAYMQTYIGGVS--C 288

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDG--TSIPYWIVKNSWGSDWGE 651
             +C+ +  NH ++++GYG            PYWI+KNSWG  WGE
Sbjct: 289 PYICS-RRLNHGVLLMGYGSSGYSQARLKEKPYWIIKNSWGESWGE 333



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 19/156 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F +   K Y S+E+   R   F  N+ +A  +Q+ D  +A   V +F DL+ S+ +
Sbjct: 46  HFTLFKKKFGKDYGSIEEHYYRFSVFKANLRRAMRHQKMDP-SARHGVTQFSDLTGSEFR 104

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +   L +    +  + + QAP                      +LPE FDWR  G ++ V
Sbjct: 105 R-KHLGVTGGFKLPKDANQAPILPTH-----------------NLPEEFDWRDRGAVTPV 146

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           K QG C  CW+FS  G +E  H +    L  LS Q 
Sbjct: 147 KNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQ 182


>gi|195025208|ref|XP_001986022.1| GH20767 [Drosophila grimshawi]
 gi|193902022|gb|EDW00889.1| GH20767 [Drosophila grimshawi]
          Length = 329

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 163/341 (47%), Gaps = 47/341 (13%)

Query: 178 VGVVEAMH---AIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTN---VEKAEDYQSED 231
           VG V+A+    A+Q  N  ++   +HDK Y S ++ L R   F  +   ++   +  +  
Sbjct: 11  VGYVQAVFYSGALQ--NEWDIYKVNHDKRYGSEDEELLRKLIFYDHKRMIDTHNERYAAG 68

Query: 232 SGTAVFGVNKFFDLSESDLQ--QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             T   GVN+F D+  S+ +   L  LN+     DI    +AP +               
Sbjct: 69  KETYEMGVNQFTDMLSSEFESAMLGSLNITDIASDIDIIYEAPKNL-------------- 114

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                ++P++ DWR +G ++ VK+Q KCA CWAFSAVG +E    ++ N L  LS Q LV
Sbjct: 115 -----EIPKSIDWRDKGAVTGVKDQLKCASCWAFSAVGALEGQQFLKTNKLVALSEQNLV 169

Query: 350 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 409
           DC + N GC+GG    AL Y+ DN G+ ++ +Y YK  +S+  C   ++      V+E  
Sbjct: 170 DCSLDNKGCDGGWPILALAYVRDNRGIDTESSYSYKGHKSD--CHF-DQGHIGATVREIC 226

Query: 410 RIPYGEEEEMKKWVATRGPLSVGMNANGLF-YYSGGVID-------LNQRL----YGTSI 457
                +E  +   VATRGP+SV +N N  F +Y  GV +        N       YG   
Sbjct: 227 LAKLNDEANLAAVVATRGPISVTINVNNKFLHYRKGVFNDASCGKITNHAALIVGYGNDK 286

Query: 458 ---PYWIVKNSWGSDWGEKVEDKVGSSGNRTRDLELTGVLP 495
               YW+VKNSWG D+GE    ++  + N    +    + P
Sbjct: 287 RGGDYWLVKNSWGKDFGENGYIRMSRNNNNQCGIASQAIFP 327



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 11/157 (7%)

Query: 496 SKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGE 555
           +KL  L+ + LVDC + N GC+GG    AL Y+ DN G+ ++ +Y YK  +S+  C   +
Sbjct: 158 NKLVALSEQNLVDCSLDNKGCDGGWPILALAYVRDNRGIDTESSYSYKGHKSD--CHF-D 214

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF-YYSGGVIDLNQRLCNPK 614
           +      V+E       +E  +   VATRGP+SV +N N  F +Y  GV   N   C  K
Sbjct: 215 QGHIGATVREICLAKLNDEANLAAVVATRGPISVTINVNNKFLHYRKGV--FNDASCG-K 271

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
             NHA +IVGYG  +K+ G    YW+VKNSWG D+GE
Sbjct: 272 ITNHAALIVGYG-NDKRGG---DYWLVKNSWGKDFGE 304



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 24/154 (15%)

Query: 51  DHDKVYSSVEDLLRRHENFVTNVEKAEDY-QREDSGTAVFE--VNKFFDLSDSDLQ--QL 105
           +HDK Y S ++ L R   F  +    + + +R  +G   +E  VN+F D+  S+ +   L
Sbjct: 33  NHDKRYGSEDEELLRKLIFYDHKRMIDTHNERYAAGKETYEMGVNQFTDMLSSEFESAML 92

Query: 106 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 165
             LN+     DI    +AP +                    ++P++ DWR +G ++ VK+
Sbjct: 93  GSLNITDIASDIDIIYEAPKNL-------------------EIPKSIDWRDKGAVTGVKD 133

Query: 166 QGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           Q KCA CWAFSAVG +E    ++ N L  LS Q+
Sbjct: 134 QLKCASCWAFSAVGALEGQQFLKTNKLVALSEQN 167


>gi|426369382|ref|XP_004051670.1| PREDICTED: cathepsin F [Gorilla gorilla gorilla]
          Length = 517

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 153/293 (52%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  +++ Y S E+   R   FV N+ +A+  Q+ D GTA +GV KF DL+E + + +   
Sbjct: 224 VITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIY-- 281

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
            L+S L +            +   +M+  Q  S+  GD  P  +DWR++G ++KVK+QG 
Sbjct: 282 -LNSLLRE------------EPGNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVKDQGM 324

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G VE    +   +L  LS Q+L+DCD  +  C GG   +A   I + GG+
Sbjct: 325 CGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGL 384

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  Y Y+     + C    E+  KV + +   +    E+++  W+A RGP+SV +NA 
Sbjct: 385 ETEDDYSYQG--HMQSCNFSAEKA-KVYINDSVELSQ-NEQKLAAWLAKRGPISVAINAF 440

Query: 437 GLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           G+ +Y  G+            ID    L G    + +P+W +KNSWG+DWGEK
Sbjct: 441 GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEK 493



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 9/145 (6%)

Query: 508 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 567
           DCD  +  C GG   +A   I + GG+ ++  Y Y+     + C    E+  KV + +  
Sbjct: 358 DCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHM--QSCNFSAEKA-KVYINDSV 414

Query: 568 RIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE 627
            +    E+++  W+A RGP+SV +NA G+ +Y  G+    + LC+P   +HA+++VGYG 
Sbjct: 415 ELSQ-NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGN 473

Query: 628 EEKKDGTSIPYWIVKNSWGSDWGEK 652
                 + +P+W +KNSWG+DWGEK
Sbjct: 474 R-----SDVPFWAIKNSWGTDWGEK 493



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 19/138 (13%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F NF+  +++ Y S E+   R   FV N+ +A+  Q  D GTA + V KF DL++ + + 
Sbjct: 220 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 279

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +    L+S L +            +   +M+  Q  S+  GD  P  +DWR++G ++KVK
Sbjct: 280 IY---LNSLLRE------------EPGNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVK 320

Query: 165 EQGKCACCWAFSAVGVVE 182
           +QG C  CWAFS  G VE
Sbjct: 321 DQGMCGSCWAFSVTGNVE 338


>gi|395742406|ref|XP_003777749.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Pongo abelii]
          Length = 490

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 151/293 (51%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  +++ Y S E+   R   FV N+ +A+  Q+ D GTA +GV KF DL+E + + +  L
Sbjct: 197 VITYNRTYESKEEARWRLSIFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIY-L 255

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           N              P    +   +M+  Q  S+  GD  P  +DWR++G ++KVK+QG 
Sbjct: 256 N--------------PLLREEPSNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVKDQGM 297

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G VE    +   +L  LS Q+L+DCD  +  C GG   +A   I + GG+
Sbjct: 298 CGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGL 357

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  Y Y+     + C    E+  KV + +   +    E+++  W+A RGP+SV +NA 
Sbjct: 358 ETEDDYSYQG--HMQSCNFSAEKA-KVYINDSVELSQ-NEQKLAAWLAKRGPISVAINAF 413

Query: 437 GLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           G+ +Y  G+            ID    L G    + +P+W +KNSWG+DWGEK
Sbjct: 414 GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEK 466



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 9/145 (6%)

Query: 508 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 567
           DCD  +  C GG   +A   I + GG+ ++  Y Y+     + C    E+  KV + +  
Sbjct: 331 DCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHM--QSCNFSAEKA-KVYINDSV 387

Query: 568 RIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE 627
            +    E+++  W+A RGP+SV +NA G+ +Y  G+    + LC+P   +HA+++VGYG 
Sbjct: 388 ELSQ-NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGN 446

Query: 628 EEKKDGTSIPYWIVKNSWGSDWGEK 652
                 + +P+W +KNSWG+DWGEK
Sbjct: 447 R-----SDVPFWAIKNSWGTDWGEK 466



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 19/138 (13%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F NF+  +++ Y S E+   R   FV N+ +A+  Q  D GTA + V KF DL++ + + 
Sbjct: 193 FKNFVITYNRTYESKEEARWRLSIFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 252

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +  LN              P    +   +M+  Q  S+  GD  P  +DWR++G ++KVK
Sbjct: 253 IY-LN--------------PLLREEPSNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVK 293

Query: 165 EQGKCACCWAFSAVGVVE 182
           +QG C  CWAFS  G VE
Sbjct: 294 DQGMCGSCWAFSVTGNVE 311


>gi|390476660|ref|XP_003735160.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin K [Callithrix jacchus]
          Length = 329

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 145/300 (48%), Gaps = 41/300 (13%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDS---GTAVFGVNKFFDL-SESD 249
           EL  + H K Y+S  D + R   +  N++    +  E S    T    +N   D+ SE  
Sbjct: 27  ELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEV 86

Query: 250 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVIS 309
           +Q++TGL + ++      +L  P      D E RA            P++ D+R +G ++
Sbjct: 87  VQKMTGLKVPTSYSRSNDTLYIP------DWEGRA------------PDSVDYRKKGYVT 128

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQY 369
            VK QG+C  CWAFS+VG +E     +   L  LS Q LVDC   N GC GG M +A QY
Sbjct: 129 PVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQY 188

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPL 429
           +  N G+ S+ AYPY   E    C+     G   K + Y  IP G E+ +K+ VA  GP+
Sbjct: 189 VQKNRGIDSEDAYPYVGQEES--CMY-NPTGKAAKCRGYREIPEGNEKALKRAVARVGPI 245

Query: 430 SVGMNAN--GLFYYSGGVI--------DLNQRLYGTSI------PYWIVKNSWGSDWGEK 473
           SV ++A+     +YS GV         +LN  +            +WI+KNSWG +WG K
Sbjct: 246 SVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGILKGNKHWIIKNSWGENWGNK 305



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 85/158 (53%), Gaps = 12/158 (7%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEE 556
           KL  L+ + LVDC   N GC GG M +A QY+  N G+ S+ AYPY   E    C+    
Sbjct: 158 KLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEES--CMY-NP 214

Query: 557 EGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNPK 614
            G   K + Y  IP G E+ +K+ VA  GP+SV ++A+     +YS GV       CN  
Sbjct: 215 TGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGV--YYDESCNSD 272

Query: 615 AQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             NHA++ VGYG  +        +WI+KNSWG +WG K
Sbjct: 273 NLNHAVLAVGYGILKGNK-----HWIIKNSWGENWGNK 305



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 31/191 (16%)

Query: 13  GLGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRHENFVTN 72
           GL  L   M+  AL    I  T   L         + + H K Y+S  D + R   +  N
Sbjct: 3   GLKVLLLPMVSFALYPEEILDTHWEL---------WKKTHRKQYNSKVDEISRRLIWEKN 53

Query: 73  VEKAEDYQREDS-GTAVFEV--NKFFDLSDSDL-QQLTGLNLDSTLEDIQPSLQAPFSSN 128
           ++    +  E S G   +E+  N   D++  ++ Q++TGL + ++      +L  P    
Sbjct: 54  LKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPTSYSRSNDTLYIP---- 109

Query: 129 QTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQ 188
             D E RA            P++ D+R +G ++ VK QG+C  CWAFS+VG +E     +
Sbjct: 110 --DWEGRA------------PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKK 155

Query: 189 GNNLTELSVQH 199
              L  LS Q+
Sbjct: 156 TGKLLNLSPQN 166


>gi|317106675|dbj|BAJ53178.1| JHL18I08.12 [Jatropha curcas]
          Length = 368

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 146/316 (46%), Gaps = 62/316 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R + F  N+ +A  +Q  D  TAV GV  F DL+
Sbjct: 46  LNAEHHFTTFKAKFGKTYATQEEHDYRFKLFKANLRRARKHQMMDP-TAVHGVTMFSDLT 104

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
             + + Q  GL            L+ P  +++            +   +DLP  FDWR  
Sbjct: 105 PREFRRQYLGLR----------RLRLPADAHEA----------PILPTNDLPTDFDWRDH 144

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNG 356
           G ++ VK QG C  CW+FSA G +E  H +    L  LS QQLVDCD           + 
Sbjct: 145 GAVTNVKNQGSCGSCWSFSAAGALEGAHFLATGELVSLSEQQLVDCDHECDPEEYGACDS 204

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M  A +Y +  GG+  ++ YPY    ++RG    +       V  +S +   +E
Sbjct: 205 GCNGGLMTTAFEYTLKAGGLEREEDYPYTG--NDRGPCKFDRNKIVASVSNFSVVSI-DE 261

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV----IDLNQRLYGTSI--------------- 457
           +++   +   GPL+VG+NA  +  Y GGV    I   ++ +G  +               
Sbjct: 262 DQIAANLVKHGPLAVGINAVFMQTYMGGVSCPYICSKRQDHGVLLVGYGSAGYAPIRLKD 321

Query: 458 -PYWIVKNSWGSDWGE 472
            P+WI+KNSWG  WGE
Sbjct: 322 KPFWIIKNSWGESWGE 337



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 23/169 (13%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M  A +Y +  GG+  ++ YPY  ++ 
Sbjct: 178 ELVSLSEQQLVDCDHECDPEEYGACDSGCNGGLMTTAFEYTLKAGGLEREEDYPYTGND- 236

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
            RG    +       V  +S +   +E+++   +   GPL+VG+NA  +  Y GGV    
Sbjct: 237 -RGPCKFDRNKIVASVSNFSVVSI-DEDQIAANLVKHGPLAVGINAVFMQTYMGGVS--C 292

Query: 608 QRLCNPKAQNHALIIVGYGEE-----EKKDGTSIPYWIVKNSWGSDWGE 651
             +C+ K Q+H +++VGYG         KD    P+WI+KNSWG  WGE
Sbjct: 293 PYICS-KRQDHGVLLVGYGSAGYAPIRLKDK---PFWIIKNSWGESWGE 337



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 22/156 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F     K Y++ E+   R + F  N+ +A  +Q  D  TAV  V  F DL+  + +
Sbjct: 51  HFTTFKAKFGKTYATQEEHDYRFKLFKANLRRARKHQMMDP-TAVHGVTMFSDLTPREFR 109

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  GL            L+ P  +++            +   +DLP  FDWR  G ++ 
Sbjct: 110 RQYLGLR----------RLRLPADAHEA----------PILPTNDLPTDFDWRDHGAVTN 149

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CW+FSA G +E  H +    L  LS Q
Sbjct: 150 VKNQGSCGSCWSFSAAGALEGAHFLATGELVSLSEQ 185


>gi|312985015|gb|ACX54787.2| cysteine protease [Arachis diogoi]
          Length = 360

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 147/316 (46%), Gaps = 63/316 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R   F  N+ +A+ +   D  +A  GV KF DL+
Sbjct: 38  LNAEHHFTTFKTKFGKSYATQEEHDYRFGVFRANLRRAKLHAKLDP-SAEHGVTKFSDLT 96

Query: 247 ESDLQ-QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAE 305
             + + Q  GL            L+ P ++N+            +    DLPE FDWR +
Sbjct: 97  PEEFKRQYLGLK----------PLRLPSTANKA----------PILPTSDLPENFDWRDK 136

Query: 306 GVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD---------MSNG 356
           G ++ VK QG C  CWAFS  G +E  H +    L  LS QQLVDCD           + 
Sbjct: 137 GAVTPVKNQGSCGSCWAFSTTGALEGAHYLSTGELVSLSEQQLVDCDHVCDPEEYGACDA 196

Query: 357 GCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEE 416
           GCNGG M++A  YI+  GGV +++ YPY  S  +  C   ++      V  +S +   +E
Sbjct: 197 GCNGGLMNNAFDYILQAGGVQTEKDYPY--SGRDETCKF-DKSKVAATVANFSVVSL-DE 252

Query: 417 EEMKKWVATRGPLSVGMNANGLFYYSGGV---------IDLNQRLYGTSI---------- 457
           +++   +   GPL+VG+NA  +  Y GGV         +D    L G             
Sbjct: 253 DQIAANLVKHGPLAVGINAIFMQTYIGGVSCPYICGKNLDHGVLLVGYGAAGYAPIRFKD 312

Query: 458 -PYWIVKNSWGSDWGE 472
            P+WI+KNSWG  WGE
Sbjct: 313 KPFWIIKNSWGESWGE 328



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 24/169 (14%)

Query: 497 KLSRLATEKLVDCD---------MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M++A  YI+  GGV +++ YPY  S  
Sbjct: 170 ELVSLSEQQLVDCDHVCDPEEYGACDAGCNGGLMNNAFDYILQAGGVQTEKDYPY--SGR 227

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
           +  C   ++      V  +S +   +E+++   +   GPL+VG+NA  +  Y GGV    
Sbjct: 228 DETCKF-DKSKVAATVANFSVVSL-DEDQIAANLVKHGPLAVGINAIFMQTYIGGVS--C 283

Query: 608 QRLCNPKAQNHALIIVGYGEE-----EKKDGTSIPYWIVKNSWGSDWGE 651
             +C  K  +H +++VGYG         KD    P+WI+KNSWG  WGE
Sbjct: 284 PYICG-KNLDHGVLLVGYGAAGYAPIRFKDK---PFWIIKNSWGESWGE 328



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 22/156 (14%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F     K Y++ E+   R   F  N+ +A+ + + D  +A   V KF DL+  + +
Sbjct: 43  HFTTFKTKFGKSYATQEEHDYRFGVFRANLRRAKLHAKLDP-SAEHGVTKFSDLTPEEFK 101

Query: 104 -QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISK 162
            Q  GL            L+ P ++N+            +    DLPE FDWR +G ++ 
Sbjct: 102 RQYLGLK----------PLRLPSTANKA----------PILPTSDLPENFDWRDKGAVTP 141

Query: 163 VKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           VK QG C  CWAFS  G +E  H +    L  LS Q
Sbjct: 142 VKNQGSCGSCWAFSTTGALEGAHYLSTGELVSLSEQ 177


>gi|61661067|gb|AAX51229.1| cathepsin S cysteine protease [Paralichthys olivaceus]
          Length = 337

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 146/298 (48%), Gaps = 38/298 (12%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQL 253
           EL  + H K Y +  + +RR E +  N+     +  E    A  G+ + +DLS + +  L
Sbjct: 36  ELWKKSHGKTYPNEVEDVRRRELWERNLMLITKHNLE----ASMGL-QTYDLSMNHMGDL 90

Query: 254 TGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKE 313
           T   +  +   + P           D +     F  +  G D+P + DWR +G ++ VK 
Sbjct: 91  TTEEIMQSYATLTPP---------ADIQRAPAPF--VGSGADVPVSVDWRLQGCVTSVKM 139

Query: 314 QGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDALQYII 371
           QG C  CWAFSA G +E   A     L +LS Q LVDC +   N GCNGG MD A QY+I
Sbjct: 140 QGSCGSCWAFSAAGALEGQLAKTTGKLVDLSPQNLVDCSLKYGNKGCNGGFMDRAFQYVI 199

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLS 430
           DN G+ S+ +YPY+    +          ++      YS +P G+E  +K  +AT GP+S
Sbjct: 200 DNKGIDSEASYPYRGQLQQ----CSYNPSYRAANCSRYSFLPEGDEGALKNALATIGPIS 255

Query: 431 VGMNAN--GLFYYSGGVID---LNQRL--------YGTSI--PYWIVKNSWGSDWGEK 473
           V ++A      +Y  GV +     QR+        YGT     YW+VKNSWG+ +G+K
Sbjct: 256 VAIDATRPTFAFYRSGVYNDPTCTQRVNHGVLAVGYGTESGQDYWLVKNSWGTSFGDK 313



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 17/161 (10%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC +   N GCNGG MD A QY+IDN G+ S+ +YPY+    +      
Sbjct: 165 KLVDLSPQNLVDCSLKYGNKGCNGGFMDRAFQYVIDNKGIDSEASYPYRGQLQQ----CS 220

Query: 555 EEEGFK-VKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLC 611
               ++      YS +P G+E  +K  +AT GP+SV ++A      +Y  GV   N   C
Sbjct: 221 YNPSYRAANCSRYSFLPEGDEGALKNALATIGPISVAIDATRPTFAFYRSGV--YNDPTC 278

Query: 612 NPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             +  NH ++ VGYG E  +D     YW+VKNSWG+ +G+K
Sbjct: 279 TQRV-NHGVLAVGYGTESGQD-----YWLVKNSWGTSFGDK 313



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 22/153 (14%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS---GTAVFEVNKFFDLSDSDLQQLT 106
           + H K Y +  + +RR E +  N+     +  E S    T    +N   DL+  ++ Q  
Sbjct: 40  KSHGKTYPNEVEDVRRRELWERNLMLITKHNLEASMGLQTYDLSMNHMGDLTTEEIMQ-- 97

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
                +   DIQ +  APF  +                G D+P + DWR +G ++ VK Q
Sbjct: 98  SYATLTPPADIQRA-PAPFVGS----------------GADVPVSVDWRLQGCVTSVKMQ 140

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           G C  CWAFSA G +E   A     L +LS Q+
Sbjct: 141 GSCGSCWAFSAAGALEGQLAKTTGKLVDLSPQN 173


>gi|226503129|ref|NP_001149806.1| LOC100283433 precursor [Zea mays]
 gi|195634783|gb|ACG36860.1| xylem cysteine proteinase 2 precursor [Zea mays]
 gi|219884977|gb|ACL52863.1| unknown [Zea mays]
          Length = 377

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 153/299 (51%), Gaps = 38/299 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  V  + K Y S E+ LRR E F  N+   ++   ++  +   G+N F DL+  + +
Sbjct: 71  LFEEWVAKYRKAYGSFEEKLRRFEVFKDNLHHIDEANRKEVTSYWLGLNAFADLTHDEFK 130

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL-PEAFDWRAEGVISK 310
                   +T   + P            T    F++  +  G D  P + DWR +G +++
Sbjct: 131 --------ATYLGLLPK----------RTSGGRFRYGGVGDGGDEVPASVDWRKKGAVTE 172

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQY 369
           VK QG+C  CWAFS V  VE ++ I   +LT LS QQLVDC    N GC+GG MD+A  +
Sbjct: 173 VKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQQLVDCSTDGNNGCSGGVMDNAFSF 232

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEG-FKVKVKEYSRIPYGEEEEMKKWVATRGP 428
           I    G+ S++AYPY   E +  C     +G   V +  Y  +P  +E+ + K +A + P
Sbjct: 233 IATGAGLRSEEAYPYLMEEGD--CDDRARDGEVLVTISGYEDVPANDEQALVKALAHQ-P 289

Query: 429 LSVGMNANG--LFYYSGGVID------LNQRL----YGTSI--PYWIVKNSWGSDWGEK 473
           +SV + A+G    +YSGGV D      L+  +    YG+S    Y IVKNSWG+ WGEK
Sbjct: 290 VSVAIEASGRHFQFYSGGVFDGPCGSELDHGVAAVGYGSSKGQDYIIVKNSWGTHWGEK 348



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 16/164 (9%)

Query: 493 VLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++LVDC    N GC+GG MD+A  +I    G+ S++AYPY   E +  C
Sbjct: 197 IVTGNLTSLSEQQLVDCSTDGNNGCSGGVMDNAFSFIATGAGLRSEEAYPYLMEEGD--C 254

Query: 552 LVGEEEG-FKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
                +G   V +  Y  +P  +E+ + K +A + P+SV + A+G    +YSGGV D   
Sbjct: 255 DDRARDGEVLVTISGYEDVPANDEQALVKALAHQ-PVSVAIEASGRHFQFYSGGVFD--- 310

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  +H +  VGYG  + +D     Y IVKNSWG+ WGEK
Sbjct: 311 GPCGSEL-DHGVAAVGYGSSKGQD-----YIIVKNSWGTHWGEK 348



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 19/158 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V  F  ++  + K Y S E+ LRR E F  N+   ++  R++  +    +N F DL+  +
Sbjct: 69  VRLFEEWVAKYRKAYGSFEEKLRRFEVFKDNLHHIDEANRKEVTSYWLGLNAFADLTHDE 128

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL-PEAFDWRAEGVI 160
            +        +T   + P            T    F++  +  G D  P + DWR +G +
Sbjct: 129 FK--------ATYLGLLPK----------RTSGGRFRYGGVGDGGDEVPASVDWRKKGAV 170

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++VK QG+C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 171 TEVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 208


>gi|33333698|gb|AAQ11967.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 143/297 (48%), Gaps = 47/297 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTN-VEKAEDYQSEDSGTAVFG--VNKFFDLSESDLQQLTGL 256
           H K Y SV +  RR   F  N ++  E  +  + G   F   V +F D++  +   L  L
Sbjct: 30  HGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFADMTHEEFLDLLKL 89

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                L    PS    F  N  DT+M               +A DWR EG ++ VK+Q  
Sbjct: 90  QGVPAL----PSNAVHFD-NFEDTDMEE------------KDAVDWREEGAVTPVKDQAN 132

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC---DMSNGGCNGGRMDDALQYIIDN 373
           C  CWAFSAVG +E     +  +L  LS Q+LVDC   +  N GC GG M  A  ++ D 
Sbjct: 133 CGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQDE 192

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++++YPY+   S       +   +  KVK Y   P  +E+EM + VA +GP++V +
Sbjct: 193 -GIQTEESYPYEGRRSS----CKKSGDYVTKVKTYV-FPL-DEQEMARTVAAKGPVAVAI 245

Query: 434 NANGLFYYSGGVIDLNQRL---------------YGTS--IPYWIVKNSWGSDWGEK 473
            A+ L +Y  G++D   R                YG+   + YWIVKNSWG+DWGEK
Sbjct: 246 EASQLSFYDKGIVDEKCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 16/159 (10%)

Query: 498 LSRLATEKLVDC---DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           L  L+ ++LVDC   +  N GC GG M  A  ++ D G + ++++YPY+   S       
Sbjct: 156 LVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQDEG-IQTEESYPYEGRRSS----CK 210

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           +   +  KVK Y   P  +E+EM + VA +GP++V + A+ L +Y  G++D   R  N +
Sbjct: 211 KSGDYVTKVKTYV-FPL-DEQEMARTVAAKGPVAVAIEASQLSFYDKGIVDEKCRCSNKR 268

Query: 615 AQ-NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              NH +++VGYG E       + YWIVKNSWG+DWGEK
Sbjct: 269 EDLNHGVLVVGYGSE-----NGVDYWIVKNSWGADWGEK 302



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 68/154 (44%), Gaps = 20/154 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTN-VEKAEDYQREDSGTAVF--EVNKFFDLSDSDLQQ 104
           F  DH K Y SV +  RR   F  N ++  E  ++ + G   F  +V +F D++  +   
Sbjct: 26  FKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFADMTHEEFLD 85

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           L  L     L    PS    F  N  DT+M               +A DWR EG ++ VK
Sbjct: 86  LLKLQGVPAL----PSNAVHFD-NFEDTDMEE------------KDAVDWREEGAVTPVK 128

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +Q  C  CWAFSAVG +E     +   L  LS Q
Sbjct: 129 DQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQ 162


>gi|33333694|gb|AAQ11965.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 143/297 (48%), Gaps = 47/297 (15%)

Query: 200 HDKVYSSVEDLLRRHENFVTN-VEKAEDYQSEDSGTAVFG--VNKFFDLSESDLQQLTGL 256
           H K Y SV +  RR   F  N ++  E  +  + G   F   V +F D++  +   L  L
Sbjct: 30  HGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFADMTHEEFLDLLKL 89

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
                L    PS    F  N  DT+M               +A DWR EG ++ VK+Q  
Sbjct: 90  QGVPAL----PSNAVHFD-NFEDTDMEE------------KDAVDWREEGAVTPVKDQAN 132

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDC---DMSNGGCNGGRMDDALQYIIDN 373
           C  CWAFSAVG +E     +  +L  LS Q+LVDC   +  N GC GG M  A  ++ D 
Sbjct: 133 CGSCWAFSAVGAIEGQFFKKNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQDE 192

Query: 374 GGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
            G+ ++++YPY+   S       +   +  KVK Y   P  +E+EM + VA +GP++V +
Sbjct: 193 -GIQTEESYPYEGRRSS----CKKSGDYVTKVKTYV-FPL-DEQEMARTVAAKGPVAVAI 245

Query: 434 NANGLFYYSGGVIDLNQRL---------------YGTS--IPYWIVKNSWGSDWGEK 473
            A+ L +Y  G++D   R                YG+   + YWIVKNSWG+DWGEK
Sbjct: 246 EASQLSFYDKGIVDEKCRCSNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEK 302



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 16/159 (10%)

Query: 498 LSRLATEKLVDC---DMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           L  L+ ++LVDC   +  N GC GG M  A  ++ D G + ++++YPY+   S       
Sbjct: 156 LVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQDEG-IQTEESYPYEGRRSS----CK 210

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPK 614
           +   +  KVK Y   P  +E+EM + VA +GP++V + A+ L +Y  G++D   R  N +
Sbjct: 211 KSGDYVTKVKTYV-FPL-DEQEMARTVAAKGPVAVAIEASQLSFYDKGIVDEKCRCSNKR 268

Query: 615 AQ-NHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
              NH +++VGYG E       + YWIVKNSWG+DWGEK
Sbjct: 269 EDLNHGVLVVGYGSE-----NGVDYWIVKNSWGADWGEK 302



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 68/154 (44%), Gaps = 20/154 (12%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTN-VEKAEDYQREDSGTAVF--EVNKFFDLSDSDLQQ 104
           F  DH K Y SV +  RR   F  N ++  E  ++ + G   F  +V +F D++  +   
Sbjct: 26  FKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFADMTHEEFLD 85

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           L  L     L    PS    F  N  DT+M               +A DWR EG ++ VK
Sbjct: 86  LLKLQGVPAL----PSNAVHFD-NFEDTDMEE------------KDAVDWREEGAVTPVK 128

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           +Q  C  CWAFSAVG +E     +   L  LS Q
Sbjct: 129 DQANCGSCWAFSAVGAIEGQFFKKNGTLVSLSAQ 162


>gi|391343119|ref|XP_003745860.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 385

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 38/291 (13%)

Query: 200 HDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLNLD 259
           H+K Y S  + L R   F  N +  ED+ S+       G+N F DL+  + ++     L 
Sbjct: 88  HNKKYESFPEELMRRLIFEENHQFIEDHNSKKEFDFYLGMNHFGDLTNKEYRERY---LG 144

Query: 260 STLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCAC 319
               +  PS               ++ F+     +D+P+  DWR +G ++ VK QG+C  
Sbjct: 145 YRRPENTPS-------------KASYIFSRAEKIEDVPDQIDWRDQGFVTPVKNQGQCGS 191

Query: 320 CWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM--SNGGCNGGRMDDALQYIIDNGGVV 377
           CWAFSAVG +E  H      L  LS Q LVDC     N GCNGG MD A +Y+ DN G+ 
Sbjct: 192 CWAFSAVGSLEGQHFKSTGKLVSLSEQNLVDCSTPEGNSGCNGGWMDQAFEYVKDNHGID 251

Query: 378 SDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG 437
           ++ +YPY  ++   G    + +     +K +  +  G+EE +++ V   GP+SV ++A+ 
Sbjct: 252 TEDSYPYVGTD---GSCHFKNKSIGATLKGFMDVKEGDEEALRQAVGVAGPVSVAIDASS 308

Query: 438 LF--YYSGGVIDL----NQRL--------YGTSIP---YWIVKNSWGSDWG 471
           +   +Y GGV ++       L        YG       +W+VKNSWG  WG
Sbjct: 309 MLFQFYRGGVYNVPWCSTSELDHGVLVVGYGKQFQGKDFWMVKNSWGVGWG 359



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 91/159 (57%), Gaps = 15/159 (9%)

Query: 497 KLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVG 554
           KL  L+ + LVDC     N GCNGG MD A +Y+ DN G+ ++ +YPY  ++   G    
Sbjct: 211 KLVSLSEQNLVDCSTPEGNSGCNGGWMDQAFEYVKDNHGIDTEDSYPYVGTD---GSCHF 267

Query: 555 EEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLF--YYSGGVIDLNQRLCN 612
           + +     +K +  +  G+EE +++ V   GP+SV ++A+ +   +Y GGV   N   C+
Sbjct: 268 KNKSIGATLKGFMDVKEGDEEALRQAVGVAGPVSVAIDASSMLFQFYRGGV--YNVPWCS 325

Query: 613 PKAQNHALIIVGYGEE-EKKDGTSIPYWIVKNSWGSDWG 650
               +H +++VGYG++ + KD     +W+VKNSWG  WG
Sbjct: 326 TSELDHGVLVVGYGKQFQGKD-----FWMVKNSWGVGWG 359



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 47  NFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLT 106
           NF  +H+K Y S  + L R   F  N +  ED+  +        +N F DL++ + ++  
Sbjct: 83  NFKAEHNKKYESFPEELMRRLIFEENHQFIEDHNSKKEFDFYLGMNHFGDLTNKEYRERY 142

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 166
              L     +  PS               ++ F+     +D+P+  DWR +G ++ VK Q
Sbjct: 143 ---LGYRRPENTPS-------------KASYIFSRAEKIEDVPDQIDWRDQGFVTPVKNQ 186

Query: 167 GKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           G+C  CWAFSAVG +E  H      L  LS Q+
Sbjct: 187 GQCGSCWAFSAVGSLEGQHFKSTGKLVSLSEQN 219


>gi|47076309|emb|CAD89795.1| putative cathepsin L protease [Meloidogyne incognita]
          Length = 383

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 113/198 (57%), Gaps = 23/198 (11%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCD--- 352
           +PE+ DWR +G+++ VK QG C  CWAFSA G +E  H+ +  +L  LS Q L+DC    
Sbjct: 163 IPESVDWRDKGLVTSVKNQGMCGSCWAFSATGALEGQHSRKLGTLVSLSEQNLIDCTKGE 222

Query: 353 -MSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRI 411
              N GCNGG MD+A QYI DN GV ++ +YPYKA   ++ CL  +          Y  +
Sbjct: 223 PYGNMGCNGGLMDNAFQYIEDNKGVDTENSYPYKAKNGKK-CLF-KRSNVGATDTGYVDL 280

Query: 412 PYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVID--------LNQRL----YGTSI 457
           P G+E+++K  VAT+GP+SV ++A    +  Y+ GV D        L   +    YGT  
Sbjct: 281 PSGDEDKLKIAVATQGPISVAIDAGHRSFQLYAHGVYDEEACSPDNLGHGVLVVGYGTDD 340

Query: 458 ---PYWIVKNSWGSDWGE 472
               YW+VKNSWG  WGE
Sbjct: 341 IHGDYWLVKNSWGEHWGE 358



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 96/174 (55%), Gaps = 21/174 (12%)

Query: 491 TGVLPSKLSR-------LATEKLVDCD----MSNGGCNGGRMDDALQYIIDNGGVVSDQA 539
           TG L  + SR       L+ + L+DC       N GCNGG MD+A QYI DN GV ++ +
Sbjct: 193 TGALEGQHSRKLGTLVSLSEQNLIDCTKGEPYGNMGCNGGLMDNAFQYIEDNKGVDTENS 252

Query: 540 YPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY- 598
           YPYKA   ++ CL  +          Y  +P G+E+++K  VAT+GP+SV ++A    + 
Sbjct: 253 YPYKAKNGKK-CLF-KRSNVGATDTGYVDLPSGDEDKLKIAVATQGPISVAIDAGHRSFQ 310

Query: 599 -YSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            Y+ GV D  +  C+P    H +++VGYG     D     YW+VKNSWG  WGE
Sbjct: 311 LYAHGVYD--EEACSPDNLGHGVLVVGYG----TDDIHGDYWLVKNSWGEHWGE 358



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 17/155 (10%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDS-GTAVFEV--NKFFDLSDSDLQQ 104
           +   H K Y + ++   R   +++  +  E +QR+ + G   F+V  N   D+  +  ++
Sbjct: 74  YKEKHGKSYPNQDEDNERMLAYLSAKQFIEKHQRDYTEGRVSFQVGENHMADVPFNQYRK 133

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           L G      L D      A    N + T +      ++      PE+ DWR +G+++ VK
Sbjct: 134 LNGFK--RLLGD------AVTRKNASSTFLPPLNMYAI------PESVDWRDKGLVTSVK 179

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
            QG C  CWAFSA G +E  H+ +   L  LS Q+
Sbjct: 180 NQGMCGSCWAFSATGALEGQHSRKLGTLVSLSEQN 214


>gi|326507362|dbj|BAK03074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 473

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 27/203 (13%)

Query: 291 RH--GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
           RH   ++LPEA DWR +G ++ VK QG+C  CWAFSAV  VE+++ I    +  LS Q+L
Sbjct: 141 RHDGAEELPEAVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQEL 200

Query: 349 VDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           V+CD++  + GCNGG MDDA ++II NGG+ ++  YPYKA +    C V  +    V + 
Sbjct: 201 VECDINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGR--CDVLRKNAKVVSID 258

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSG------------GVIDLNQR 451
            +  +P  +E+ ++K VA   P+SV + A G     Y+SG            GV+ +   
Sbjct: 259 GFEDVPENDEKSLQKAVAHH-PVSVAIEAGGREFQLYHSGVFSGRCGTQLDHGVVAVG-- 315

Query: 452 LYGT--SIPYWIVKNSWGSDWGE 472
            YGT     YWIV+NSWG +WGE
Sbjct: 316 -YGTENGKDYWIVRNSWGPNWGE 337



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 18/168 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           ++  ++  L+ ++LV+CD++  + GCNGG MDDA ++II NGG+ ++  YPYKA +    
Sbjct: 187 IVTGEMVTLSEQELVECDINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGR-- 244

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLN 607
           C V  +    V +  +  +P  +E+ ++K VA   P+SV + A G     Y+SG    + 
Sbjct: 245 CDVLRKNAKVVSIDGFEDVPENDEKSLQKAVAHH-PVSVAIEAGGREFQLYHSG----VF 299

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
              C  +  +H ++ VGYG E  KD     YWIV+NSWG +WGE   L
Sbjct: 300 SGRCGTQ-LDHGVVAVGYGTENGKD-----YWIVRNSWGPNWGEAGYL 341



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 143 RH--GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           RH   ++LPEA DWR +G ++ VK QG+C  CWAFSAV  VE+++ I    +  LS Q
Sbjct: 141 RHDGAEELPEAVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQ 198


>gi|204307508|gb|ACI00280.1| triticain beta 2 [Hordeum vulgare]
          Length = 473

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 27/203 (13%)

Query: 291 RH--GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQL 348
           RH   ++LPEA DWR +G ++ VK QG+C  CWAFSAV  VE+++ I    +  LS Q+L
Sbjct: 141 RHDGAEELPEAVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQEL 200

Query: 349 VDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVK 406
           V+CD++  + GCNGG MDDA ++II NGG+ ++  YPYKA +    C V  +    V + 
Sbjct: 201 VECDINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGR--CDVLRKNAKVVSID 258

Query: 407 EYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSG------------GVIDLNQR 451
            +  +P  +E+ ++K VA   P+SV + A G     Y+SG            GV+ +   
Sbjct: 259 GFEDVPENDEKSLQKAVAHH-PVSVAIEAGGREFQLYHSGVFSGRCGTQLDHGVVAVG-- 315

Query: 452 LYGT--SIPYWIVKNSWGSDWGE 472
            YGT     YWIV+NSWG +WGE
Sbjct: 316 -YGTENGKDYWIVRNSWGPNWGE 337



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 18/168 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           ++  ++  L+ ++LV+CD++  + GCNGG MDDA ++II NGG+ ++  YPYKA +    
Sbjct: 187 IVTGEMVTLSEQELVECDINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYPYKAVDGR-- 244

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLN 607
           C V  +    V +  +  +P  +E+ ++K VA   P+SV + A G     Y+SG    + 
Sbjct: 245 CDVLRKNAKVVSIDGFEDVPENDEKSLQKAVAHH-PVSVAIEAGGREFQLYHSG----VF 299

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEKVML 655
              C  +  +H ++ VGYG E  KD     YWIV+NSWG +WGE   L
Sbjct: 300 SGRCGTQ-LDHGVVAVGYGTENGKD-----YWIVRNSWGPNWGEAGYL 341



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 143 RH--GDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           RH   ++LPEA DWR +G ++ VK QG+C  CWAFSAV  VE+++ I    +  LS Q
Sbjct: 141 RHDGAEELPEAVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQ 198


>gi|375073984|gb|AFA34859.1| cathepsin L-like protein [Trypanosoma rangeli]
          Length = 467

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 141/291 (48%), Gaps = 35/291 (12%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGLN 257
           Q H KVY S  +   R   F  N+  A  + + +   A FGV  F DL            
Sbjct: 43  QRHGKVYRSAAEEAFRLGVFKENLLLARLHAAANP-HASFGVTPFSDL------------ 89

Query: 258 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 317
              T E+ +       +      +               P A DWRA G ++ VK+QG+C
Sbjct: 90  ---TREEFRSRYHNAAAHFAAAQKRARVPVEVEVEVGGAPAAVDWRARGAVTAVKDQGEC 146

Query: 318 ACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYII--DNGG 375
             CWAFS +G +E    + GN LT LS Q LV CD ++ GC+GG MD+A  +I+  +NG 
Sbjct: 147 GSCWAFSTIGNIEGQWHLAGNPLTSLSEQMLVSCDNADNGCDGGLMDNAFDWIVGKNNGT 206

Query: 376 VVSDQAYPYKA--SESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGM 433
           V ++ +Y Y +    S++  + G   G    +  +  +P  +E++M  W+A  GPL++ +
Sbjct: 207 VYTEASYSYVSGGGNSQKCDMSGHVVG--AVISGHVDLPK-DEDKMAAWLAANGPLAIAV 263

Query: 434 NANGLFYYSGGV--------IDLNQRLYG----TSIPYWIVKNSWGSDWGE 472
           +A     Y+GGV        +D    L G    ++ PYWI+KNSWG+DWGE
Sbjct: 264 DATSFMSYTGGVLTNCISDQLDHGVVLVGYNDSSNPPYWIIKNSWGADWGE 314



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 92/158 (58%), Gaps = 16/158 (10%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKAS--ESERGCLV 553
           L+ L+ + LV CD ++ GC+GG MD+A  +I+  +NG V ++ +Y Y +    S++  + 
Sbjct: 169 LTSLSEQMLVSCDNADNGCDGGLMDNAFDWIVGKNNGTVYTEASYSYVSGGGNSQKCDMS 228

Query: 554 GEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNP 613
           G   G    +  +  +P  +E++M  W+A  GPL++ ++A     Y+GGV+      C  
Sbjct: 229 GHVVG--AVISGHVDLPK-DEDKMAAWLAANGPLAIAVDATSFMSYTGGVLTN----CIS 281

Query: 614 KAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              +H +++VGY      D ++ PYWI+KNSWG+DWGE
Sbjct: 282 DQLDHGVVLVGY-----NDSSNPPYWIIKNSWGADWGE 314



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFS +G +E    + GN LT LS Q
Sbjct: 126 PAAVDWRARGAVTAVKDQGECGSCWAFSTIGNIEGQWHLAGNPLTSLSEQ 175


>gi|224133760|ref|XP_002321654.1| predicted protein [Populus trichocarpa]
 gi|222868650|gb|EEF05781.1| predicted protein [Populus trichocarpa]
          Length = 362

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 116/196 (59%), Gaps = 19/196 (9%)

Query: 294 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM 353
           + +P + DWR +G ++ VK+QG+C  CWAFS +  VE ++ I+ N L  LS Q+LVDCD 
Sbjct: 126 EKVPTSVDWRKKGAVTAVKDQGQCGSCWAFSTIVAVEGINYIKTNELVSLSEQELVDCDT 185

Query: 354 S-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
           + N GCNGG M+ A ++I    G+ ++  YPYKA +    C   +E    V +  Y ++P
Sbjct: 186 TENQGCNGGLMEYAFEFIKKKRGITTESTYPYKAEDGH--CDAAKENNPAVSIDGYEKVP 243

Query: 413 YGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVI------DLNQRL----YGTSI--- 457
             +E+ + K  A + P+SV ++A G    +YS GV       +L+  +    YGT++   
Sbjct: 244 ENDEDALLKAAANQ-PVSVAIDAGGSDFQFYSEGVFIGECGTELDHGVAVVGYGTTLDGT 302

Query: 458 PYWIVKNSWGSDWGEK 473
            YWIV+NSWG +WGEK
Sbjct: 303 KYWIVRNSWGPEWGEK 318



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 14/163 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMS-NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           +  ++L  L+ ++LVDCD + N GCNGG M+ A ++I    G+ ++  YPYKA +    C
Sbjct: 167 IKTNELVSLSEQELVDCDTTENQGCNGGLMEYAFEFIKKKRGITTESTYPYKAEDGH--C 224

Query: 552 LVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQR 609
              +E    V +  Y ++P  +E+ + K  A + P+SV ++A G    +YS GV      
Sbjct: 225 DAAKENNPAVSIDGYEKVPENDEDALLKAAANQ-PVSVAIDAGGSDFQFYSEGVFIGE-- 281

Query: 610 LCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
            C  +  +H + +VGYG     DGT   YWIV+NSWG +WGEK
Sbjct: 282 -CGTEL-DHGVAVVGYG--TTLDGTK--YWIVRNSWGPEWGEK 318



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 14/149 (9%)

Query: 50  RDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLN 109
           R H  V +S+++  +R   F  NV       +      + ++NKF D+++ + + +   +
Sbjct: 44  RSHHTVSTSLDEKHKRFNVFKENVMHVHKTNKMGKPYKL-KLNKFADMTNHEFRSVYAGS 102

Query: 110 LDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKC 169
                   + + +   S          F +  +   + +P + DWR +G ++ VK+QG+C
Sbjct: 103 KVKHHRMFRGTTRGNGS----------FMYGKV---EKVPTSVDWRKKGAVTAVKDQGQC 149

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
             CWAFS +  VE ++ I+ N L  LS Q
Sbjct: 150 GSCWAFSTIVAVEGINYIKTNELVSLSEQ 178


>gi|356543124|ref|XP_003540013.1| PREDICTED: vignain-like [Glycine max]
 gi|356543126|ref|XP_003540014.1| PREDICTED: vignain-like [Glycine max]
          Length = 337

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 18/193 (9%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSN 355
           +P A DWR  G ++ VK+QG+C  CWAFS V   E ++ I  + L  LS Q+LVDCD  +
Sbjct: 121 VPNAVDWRENGAVTAVKDQGQCGSCWAFSTVAATEGIYQITTSMLMSLSEQELVDCDSVD 180

Query: 356 GGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGE 415
            GC+GG M+   ++II NGG+ S+  YPY A +    C   +E     ++K Y  +P   
Sbjct: 181 HGCDGGYMEGGFEFIIKNGGISSEANYPYTAVDGT--CDANKEASPAAQIKGYETVPANS 238

Query: 416 EEEMKKWVATRGPLSVGMNANG--LFYYSGGVID----------LNQRLYGTS---IPYW 460
           E+ ++K VA + P+SV ++A G    +YS GV            +    YG++     YW
Sbjct: 239 EDALQKAVANQ-PVSVTIDAGGSAFQFYSSGVFTGQCGTQLDHGVTAVGYGSTDDGTQYW 297

Query: 461 IVKNSWGSDWGEK 473
           IVKNSWG+ WGE+
Sbjct: 298 IVKNSWGTQWGEE 310



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 13/162 (8%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           +  S L  L+ ++LVDCD  + GC+GG M+   ++II NGG+ S+  YPY A +    C 
Sbjct: 160 ITTSMLMSLSEQELVDCDSVDHGCDGGYMEGGFEFIIKNGGISSEANYPYTAVDGT--CD 217

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQRL 610
             +E     ++K Y  +P   E+ ++K VA + P+SV ++A G    +YS GV       
Sbjct: 218 ANKEASPAAQIKGYETVPANSEDALQKAVANQ-PVSVTIDAGGSAFQFYSSGVFTGQ--- 273

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
           C  +  +H +  VGYG  +  DGT   YWIVKNSWG+ WGE+
Sbjct: 274 CGTQL-DHGVTAVGYGSTD--DGTQ--YWIVKNSWGTQWGEE 310



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 22/192 (11%)

Query: 7   VSLGEKGLGYLHTFMIKVALLESNIFQTRGYLNSPVTRFLNFMRDHDKVYSSVEDLLRRH 66
            S+G+K   ++   ++ +++  S +     +  S   R   +M+ + KVY    +  +R 
Sbjct: 2   ASIGKKQ--HILALVLLLSICTSQVMSRNLHEASMSERHEQWMKKYGKVYKDAAEKQKRL 59

Query: 67  ENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQLTGLNLDSTLEDIQPSLQAPFS 126
             F  NVE  E +            N+ + LS + L        D T E+   S      
Sbjct: 60  LIFKDNVEFIESFNAAG--------NRPYKLSINHL-------ADQTNEEFVASHNG--Y 102

Query: 127 SNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHA 186
            ++       F++ ++     +P A DWR  G ++ VK+QG+C  CWAFS V   E ++ 
Sbjct: 103 KHKGSHSQTPFKYENVT---GVPNAVDWRENGAVTAVKDQGQCGSCWAFSTVAATEGIYQ 159

Query: 187 IQGNNLTELSVQ 198
           I  + L  LS Q
Sbjct: 160 ITTSMLMSLSEQ 171


>gi|294662444|pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3
           Inhibitor
 gi|294662445|pdb|3KWN|B Chain B, Cathepsin S In Complex With Thioether Acetamide P3
           Inhibitor
 gi|299856824|pdb|3MPF|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With
           Bound Drug
 gi|299856825|pdb|3MPF|B Chain B, Crystal Structure Of Human Cathepsin-S C25s Mutant With
           Bound Drug
          Length = 219

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 114/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C   WAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGASWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 60

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 61  YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 117

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 118 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 177

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 178 EYWLVKNSWGHNFGEE 193



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 105/199 (52%), Gaps = 26/199 (13%)

Query: 469 DWGEK---VEDKVGSSGNRTRDLELTGVLPS-------KLSRLATEKLVDCDM---SNGG 515
           DW EK    E K   S   +      G L +       KL  L+ + LVDC      N G
Sbjct: 6   DWREKGCVTEVKYQGSCGASWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKG 65

Query: 516 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 575
           CNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +PYG E+
Sbjct: 66  CNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELPYGRED 122

Query: 576 EMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDG 633
            +K+ VA +GP+SVG++A     F Y  GV    +  C     NH +++VGYG+   K+ 
Sbjct: 123 VLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSCTQNV-NHGVLVVGYGDLNGKE- 178

Query: 634 TSIPYWIVKNSWGSDWGEK 652
               YW+VKNSWG ++GE+
Sbjct: 179 ----YWLVKNSWGHNFGEE 193



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C   WAFSAVG +EA   ++   L  LS Q+
Sbjct: 1   LPDSVDWREKGCVTEVKYQGSCGASWAFSAVGALEAQLKLKTGKLVSLSAQN 52


>gi|260656357|pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As
           P1 Binding Elements
 gi|260656358|pdb|3IEJ|B Chain B, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As
           P1 Binding Elements
          Length = 222

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 114/196 (58%), Gaps = 21/196 (10%)

Query: 296 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-- 353
           LP++ DWR +G +++VK QG C   WAFSAVG +EA   ++   L  LS Q LVDC    
Sbjct: 3   LPDSVDWREKGCVTEVKYQGSCGASWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 62

Query: 354 -SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIP 412
             N GCNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +P
Sbjct: 63  YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELP 119

Query: 413 YGEEEEMKKWVATRGPLSVGMNAN--GLFYYSGGVI-------DLNQRL----YG--TSI 457
           YG E+ +K+ VA +GP+SVG++A     F Y  GV        ++N  +    YG     
Sbjct: 120 YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK 179

Query: 458 PYWIVKNSWGSDWGEK 473
            YW+VKNSWG ++GE+
Sbjct: 180 EYWLVKNSWGHNFGEE 195



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 105/199 (52%), Gaps = 26/199 (13%)

Query: 469 DWGEK---VEDKVGSSGNRTRDLELTGVLPS-------KLSRLATEKLVDCDM---SNGG 515
           DW EK    E K   S   +      G L +       KL  L+ + LVDC      N G
Sbjct: 8   DWREKGCVTEVKYQGSCGASWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKG 67

Query: 516 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 575
           CNGG M  A QYIIDN G+ SD +YPYKA + +  C   + +       +Y+ +PYG E+
Sbjct: 68  CNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQK--CQY-DSKYRAATCSKYTELPYGRED 124

Query: 576 EMKKWVATRGPLSVGMNAN--GLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGEEEKKDG 633
            +K+ VA +GP+SVG++A     F Y  GV    +  C     NH +++VGYG+   K+ 
Sbjct: 125 VLKEAVANKGPVSVGVDARHPSFFLYRSGV--YYEPSCTQNV-NHGVLVVGYGDLNGKE- 180

Query: 634 TSIPYWIVKNSWGSDWGEK 652
               YW+VKNSWG ++GE+
Sbjct: 181 ----YWLVKNSWGHNFGEE 195



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%)

Query: 148 LPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           LP++ DWR +G +++VK QG C   WAFSAVG +EA   ++   L  LS Q+
Sbjct: 3   LPDSVDWREKGCVTEVKYQGSCGASWAFSAVGALEAQLKLKTGKLVSLSAQN 54


>gi|2511691|emb|CAB17075.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 365

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 148/314 (47%), Gaps = 61/314 (19%)

Query: 195 LSVQHH--------DKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLS 246
           L+ +HH         K Y++ E+   R   F +N+ +A  +   D  +AV GV KF DL+
Sbjct: 45  LNAEHHFSTFKSKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDP-SAVHGVTKFSDLT 103

Query: 247 ESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEG 306
            ++  +            ++P L+ P  + +            +   ++LP+ FDWR +G
Sbjct: 104 PAEFHR--------KFLGLKP-LRLPAHAQKA----------PILPTNNLPKDFDWRDKG 144

Query: 307 VISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM---------SNGG 357
            ++ VK+QG C  CW+FS  G +E  H +    L  LS QQLVDCD           + G
Sbjct: 145 AVTNVKDQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGSCDSG 204

Query: 358 CNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEE 417
           CNGG M++A +Y+I +GGV  ++ YPY   +   G    ++      V  YS I   +EE
Sbjct: 205 CNGGLMNNAFEYLIGSGGVQREKDYPYTGRD---GTCKFDKSKIAASVSNYSVISL-DEE 260

Query: 418 EMKKWVATRGPLSVGMNANGLFYYSGGV---------IDLNQRLYG-----------TSI 457
           ++   +   GPL+V +NA  +  Y GGV         +D    L G              
Sbjct: 261 QIAANLVKNGPLAVAINAVYMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFKEK 320

Query: 458 PYWIVKNSWGSDWG 471
           PYWI+KNSWG +WG
Sbjct: 321 PYWIIKNSWGENWG 334



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 90/171 (52%), Gaps = 30/171 (17%)

Query: 497 KLSRLATEKLVDCDM---------SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASES 547
           +L  L+ ++LVDCD           + GCNGG M++A +Y+I +GGV  ++ YPY   + 
Sbjct: 177 ELVSLSEQQLVDCDHVCDPEEYGSCDSGCNGGLMNNAFEYLIGSGGVQREKDYPYTGRD- 235

Query: 548 ERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLN 607
             G    ++      V  YS I   +EE++   +   GPL+V +NA  +  Y GGV    
Sbjct: 236 --GTCKFDKSKIAASVSNYSVISL-DEEQIAANLVKNGPLAVAINAVYMQTYVGGVS--C 290

Query: 608 QRLCNPKAQNHALIIVGYGE--------EEKKDGTSIPYWIVKNSWGSDWG 650
             +C  K  +H +++VGYGE        +EK      PYWI+KNSWG +WG
Sbjct: 291 PYICG-KHLDHGVLLVGYGEGAYAPIRFKEK------PYWIIKNSWGENWG 334



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 20/155 (12%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
            F  F     K Y++ E+   R   F +N+ +A  + + D  +AV  V KF DL+ ++  
Sbjct: 50  HFSTFKSKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDP-SAVHGVTKFSDLTPAEFH 108

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
           +            ++P L+ P  + +            +   ++LP+ FDWR +G ++ V
Sbjct: 109 R--------KFLGLKP-LRLPAHAQKA----------PILPTNNLPKDFDWRDKGAVTNV 149

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QG C  CW+FS  G +E  H +    L  LS Q
Sbjct: 150 KDQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQ 184


>gi|359359213|gb|AEV41117.1| putative oryzain beta chain precursor [Oryza officinalis]
          Length = 465

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 50/302 (16%)

Query: 194 ELSVQHHDKVYSSVEDLLRRHENFVTNVE--KAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           +L +  + + Y+++ +  RR   F  N+    A + +++D G  + G+N+F DL+  + +
Sbjct: 55  DLWLAENGRSYNALGEHERRFRVFWDNLRFADAHNARADDHGFRL-GMNRFADLTNEEFR 113

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG--DDLPEAFDWRAEGVIS 309
                              A F   +     RA      RH   ++LPE+ DWR +G ++
Sbjct: 114 -------------------ATFLGAKVVERSRA-AGERYRHDGVEELPESVDWREKGAVA 153

Query: 310 KVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGCNGGRMDDAL 367
            VK QG+C  CWAFSAV  VE+++ +    +  LS Q+LV+C  +  N GCNGG MDDA 
Sbjct: 154 PVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAF 213

Query: 368 QYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRG 427
            +II NGG+ ++  YPYKA + +  C +  E    V +  +  +P  +E+ ++K VA + 
Sbjct: 214 DFIIKNGGIDTEDDYPYKAVDGK--CDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQ- 270

Query: 428 PLSVGMNANGL---FYYSG------------GVIDLNQRLYGT--SIPYWIVKNSWGSDW 470
           P+SV + A G     Y+SG            GV+ +    YGT     YWIV+NSWG  W
Sbjct: 271 PVSVAIEAGGREFQLYHSGVFSGRCGTSLDHGVVAVG---YGTDNGKDYWIVRNSWGPKW 327

Query: 471 GE 472
           GE
Sbjct: 328 GE 329



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 18/164 (10%)

Query: 493 VLPSKLSRLATEKLVDCDMS--NGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERG 550
           ++  ++  L+ ++LV+C  +  N GCNGG MDDA  +II NGG+ ++  YPYKA + +  
Sbjct: 179 LVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGK-- 236

Query: 551 CLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGL---FYYSGGVIDLN 607
           C +  E    V +  +  +P  +E+ ++K VA + P+SV + A G     Y+SG    + 
Sbjct: 237 CDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQ-PVSVAIEAGGREFQLYHSG----VF 291

Query: 608 QRLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
              C   + +H ++ VGYG +  KD     YWIV+NSWG  WGE
Sbjct: 292 SGRCG-TSLDHGVVAVGYGTDNGKD-----YWIVRNSWGPKWGE 329



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 23/154 (14%)

Query: 48  FMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQ-REDSGTAVFEVNKFFDLSDSDLQQLT 106
           ++ ++ + Y+++ +  RR   F  N+  A+ +  R D       +N+F DL++ + +   
Sbjct: 57  WLAENGRSYNALGEHERRFRVFWDNLRFADAHNARADDHGFRLGMNRFADLTNEEFR--- 113

Query: 107 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHG--DDLPEAFDWRAEGVISKVK 164
                           A F   +     RA      RH   ++LPE+ DWR +G ++ VK
Sbjct: 114 ----------------ATFLGAKVVERSRA-AGERYRHDGVEELPESVDWREKGAVAPVK 156

Query: 165 EQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
            QG+C  CWAFSAV  VE+++ +    +  LS Q
Sbjct: 157 NQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQ 190


>gi|237637236|gb|ACR07918.1| cysteine proteinase [Trypanosoma cruzi]
          Length = 345

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 15/202 (7%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q LV CD ++ 
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDS 61

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           GC GG M++A ++I+  +NG V ++ +YPY + E                +  +  +P  
Sbjct: 62  GCGGGLMNNAFEWIVQENNGAVYTEGSYPYASGEGISPPCTTSGHTVGATITGHVELPQ- 120

Query: 415 EEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----TSIPYWIV 462
           +E ++  W+A  GP++V ++A+    Y+GGV        +D    L G     ++PYW++
Sbjct: 121 DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWVI 180

Query: 463 KNSWGSDWGEKVEDKVGSSGNR 484
           KNSW + WGE    ++    N+
Sbjct: 181 KNSWTTQWGEDGYIRIAKGSNQ 202



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 45  LTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTEGSYPYASGEGISPPCTTS 104

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 105 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 159

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYW++KNSW + WGE
Sbjct: 160 LDHGVLLVGY-----NDSAAVPYWVIKNSWTTQWGE 190



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 51


>gi|42564149|gb|AAS20588.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 322

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 143/294 (48%), Gaps = 44/294 (14%)

Query: 198 QHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS---EDSGTAVFGVNKFFDLSESDLQQLT 254
           Q H K Y S+ +   R   F  N+   E + +   E   T    V +F D++  + ++  
Sbjct: 28  QTHGKTYKSLLEERTRFGIFQNNLRTIEKHNAKYEEGKVTYYMAVTQFADMTRDEFRKKL 87

Query: 255 GLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQ 314
           GL       + +P+L A       D E              LPE  DW  +G +  VK Q
Sbjct: 88  GLQ-----NNRRPNLNATLQVFPEDLE--------------LPEQIDWTEKGAVLPVKNQ 128

Query: 315 GKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMS--NGGC-NGGRMDDALQYII 371
           G C  CWAFS  G +E  +AI     T LS QQL+DC  S  NG C +GG M +A  YII
Sbjct: 129 GNCRSCWAFSTTGSLEGQNAIHNKVKTPLSEQQLLDCSASYGNGDCDDGGLMTEAFDYII 188

Query: 372 DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSV 431
           DN G+ ++ +YPY    +E  C    ++   V++K Y ++   +E+E+KK V T GP+SV
Sbjct: 189 DN-GIEAESSYPYVEQMTE--CQYDAKKTI-VQIKGYKKL-LADEDELKKAVGTVGPISV 243

Query: 432 GMNANGLFYYSGGVIDLNQRLYG-------------TSIPYWIVKNSWGSDWGE 472
           GM++  L  Y GGV+  +Q  +G                 +W VKNSWG+ WGE
Sbjct: 244 GMSSENLHMYGGGVLG-DQCYFGMDHAVLVVGYGEANGKKFWKVKNSWGATWGE 296



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 91/154 (59%), Gaps = 17/154 (11%)

Query: 501 LATEKLVDCDMS--NGGCN-GGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEE 557
           L+ ++L+DC  S  NG C+ GG M +A  YIIDNG + ++ +YPY    +E  C    ++
Sbjct: 157 LSEQQLLDCSASYGNGDCDDGGLMTEAFDYIIDNG-IEAESSYPYVEQMTE--CQYDAKK 213

Query: 558 GFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQN 617
              V++K Y ++   +E+E+KK V T GP+SVGM++  L  Y GGV+            +
Sbjct: 214 TI-VQIKGYKKL-LADEDELKKAVGTVGPISVGMSSENLHMYGGGVLGDQCYF----GMD 267

Query: 618 HALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           HA+++VGYGE   K      +W VKNSWG+ WGE
Sbjct: 268 HAVLVVGYGEANGK-----KFWKVKNSWGATWGE 296



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 22/159 (13%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRH---ENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDS 100
           +++ F + H K Y S+ +   R    +N +  +EK      E   T    V +F D++  
Sbjct: 22  QWVAFKQTHGKTYKSLLEERTRFGIFQNNLRTIEKHNAKYEEGKVTYYMAVTQFADMTRD 81

Query: 101 DLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVI 160
           + ++  GL       + +P+L A       D E              LPE  DW  +G +
Sbjct: 82  EFRKKLGLQ-----NNRRPNLNATLQVFPEDLE--------------LPEQIDWTEKGAV 122

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
             VK QG C  CWAFS  G +E  +AI     T LS Q 
Sbjct: 123 LPVKNQGNCRSCWAFSTTGSLEGQNAIHNKVKTPLSEQQ 161


>gi|413942348|gb|AFW74997.1| Xylem cysteine proteinase 2 [Zea mays]
          Length = 391

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 153/299 (51%), Gaps = 38/299 (12%)

Query: 192 LTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQ 251
           L E  V  + K Y S E+ LRR E F  N+   ++   ++  +   G+N F DL+  + +
Sbjct: 85  LFEEWVAKYRKAYGSFEEKLRRFEVFKDNLHHIDEANRKEVTSYWLGLNAFADLTHDEFK 144

Query: 252 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL-PEAFDWRAEGVISK 310
                   +T   + P            T    F++  +  G D  P + DWR +G +++
Sbjct: 145 --------ATYLGLLPK----------RTSGGRFRYGGVGDGGDEVPASVDWRKKGAVTE 186

Query: 311 VKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM-SNGGCNGGRMDDALQY 369
           VK QG+C  CWAFS V  VE ++ I   +LT LS QQLVDC    N GC+GG MD+A  +
Sbjct: 187 VKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQQLVDCSTDGNNGCSGGVMDNAFSF 246

Query: 370 IIDNGGVVSDQAYPYKASESERGCLVGEEEG-FKVKVKEYSRIPYGEEEEMKKWVATRGP 428
           I    G+ S++AYPY   E +  C     +G   V +  Y  +P  +E+ + K +A + P
Sbjct: 247 IATGAGLRSEEAYPYLMEEGD--CDDRARDGEVLVTISGYEDVPANDEQALVKALAHQ-P 303

Query: 429 LSVGMNANG--LFYYSGGVID------LNQRL----YGTSI--PYWIVKNSWGSDWGEK 473
           +SV + A+G    +YSGGV D      L+  +    YG+S    Y IVKNSWG+ WGEK
Sbjct: 304 VSVAIEASGRHFQFYSGGVFDGPCGSELDHGVAAVGYGSSKGQDYIIVKNSWGTHWGEK 362



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 16/164 (9%)

Query: 493 VLPSKLSRLATEKLVDCDM-SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGC 551
           ++   L+ L+ ++LVDC    N GC+GG MD+A  +I    G+ S++AYPY   E +  C
Sbjct: 211 IVTGNLTSLSEQQLVDCSTDGNNGCSGGVMDNAFSFIATGAGLRSEEAYPYLMEEGD--C 268

Query: 552 LVGEEEG-FKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANG--LFYYSGGVIDLNQ 608
                +G   V +  Y  +P  +E+ + K +A + P+SV + A+G    +YSGGV D   
Sbjct: 269 DDRARDGEVLVTISGYEDVPANDEQALVKALAHQ-PVSVAIEASGRHFQFYSGGVFD--- 324

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  +  +H +  VGYG  + +D     Y IVKNSWG+ WGEK
Sbjct: 325 GPCGSEL-DHGVAAVGYGSSKGQD-----YIIVKNSWGTHWGEK 362



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 19/158 (12%)

Query: 42  VTRFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSD 101
           V  F  ++  + K Y S E+ LRR E F  N+   ++  R++  +    +N F DL+  +
Sbjct: 83  VRLFEEWVAKYRKAYGSFEEKLRRFEVFKDNLHHIDEANRKEVTSYWLGLNAFADLTHDE 142

Query: 102 LQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDL-PEAFDWRAEGVI 160
            +        +T   + P            T    F++  +  G D  P + DWR +G +
Sbjct: 143 FK--------ATYLGLLPK----------RTSGGRFRYGGVGDGGDEVPASVDWRKKGAV 184

Query: 161 SKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           ++VK QG+C  CWAFS V  VE ++ I   NLT LS Q
Sbjct: 185 TEVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQ 222


>gi|237637242|gb|ACR07921.1| cysteine proteinase [Trypanosoma cruzi]
          Length = 345

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 15/202 (7%)

Query: 297 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNG 356
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q LV CD ++ 
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDS 61

Query: 357 GCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYG 414
           GC GG M++A ++I+  +NG V ++ +YPY + E                +  +  +P  
Sbjct: 62  GCGGGLMNNAFEWIVQENNGAVYTEGSYPYASGEGISPPCTTSGHTVGATITGHVELPQ- 120

Query: 415 EEEEMKKWVATRGPLSVGMNANGLFYYSGGV--------IDLNQRLYG----TSIPYWIV 462
           +E ++  W+A  GP++V ++A+    Y+GGV        +D    L G     ++PYW++
Sbjct: 121 DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWVI 180

Query: 463 KNSWGSDWGEKVEDKVGSSGNR 484
           KNSW + WGE    ++    N+
Sbjct: 181 KNSWTTQWGEDGYIRIAKGSNQ 202



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 12/156 (7%)

Query: 498 LSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKASESERGCLVGE 555
           L+ L+ + LV CD ++ GC GG M++A ++I+  +NG V ++ +YPY + E         
Sbjct: 45  LTNLSEQMLVSCDKTDSGCGGGLMNNAFEWIVQENNGAVYTEGSYPYASGEGISPPCTTS 104

Query: 556 EEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKA 615
                  +  +  +P  +E ++  W+A  GP++V ++A+    Y+GGV+      C  + 
Sbjct: 105 GHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQ 159

Query: 616 QNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
            +H +++VGY      D  ++PYW++KNSW + WGE
Sbjct: 160 LDHGVLLVGY-----NDSAAVPYWVIKNSWTTQWGE 190



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 149 PEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           P A DWRA G ++ VK+QG+C  CWAFSA+G VE    + G+ LT LS Q
Sbjct: 2   PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQ 51


>gi|355566270|gb|EHH22649.1| Cathepsin F [Macaca mulatta]
          Length = 484

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 151/293 (51%), Gaps = 39/293 (13%)

Query: 197 VQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQSEDSGTAVFGVNKFFDLSESDLQQLTGL 256
           V  +++ Y S E+   R   FV N+ +A+  Q+ D GTA +GV KF DL+E + + +  L
Sbjct: 191 VITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIY-L 249

Query: 257 NLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVKEQGK 316
           N              P    +   +M+  Q  S+  GD  P  +DWR++G ++KVK+QG 
Sbjct: 250 N--------------PLLREEPGNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVKDQGM 291

Query: 317 CACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDMSNGGCNGGRMDDALQYIIDNGGV 376
           C  CWAFS  G VE    +   +L  LS Q+L+DCD  +  C GG   +A   I + GG+
Sbjct: 292 CGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGL 351

Query: 377 VSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNAN 436
            ++  Y Y+     + C    E+  KV + +   +    E+++  W+A +GP+SV +NA 
Sbjct: 352 ETEDDYSYRG--HMQACNFSAEKA-KVYINDSVELSQ-NEQKLAAWLAKKGPISVAINAF 407

Query: 437 GLFYYSGGV------------IDLNQRLYG----TSIPYWIVKNSWGSDWGEK 473
           G+ +Y  G+            ID    L G    + IP+W +KNSWG+DWGEK
Sbjct: 408 GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAIKNSWGTDWGEK 460



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 9/145 (6%)

Query: 508 DCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYS 567
           DCD  +  C GG   +A   I + GG+ ++  Y Y+     + C    E+  KV + +  
Sbjct: 325 DCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYRGHM--QACNFSAEKA-KVYINDSV 381

Query: 568 RIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQRLCNPKAQNHALIIVGYGE 627
            +    E+++  W+A +GP+SV +NA G+ +Y  G+    + LC+P   +HA+++VGYG 
Sbjct: 382 ELSQ-NEQKLAAWLAKKGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGN 440

Query: 628 EEKKDGTSIPYWIVKNSWGSDWGEK 652
                 + IP+W +KNSWG+DWGEK
Sbjct: 441 R-----SDIPFWAIKNSWGTDWGEK 460



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 19/138 (13%)

Query: 45  FLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQQ 104
           F NF+  +++ Y S E+   R   FV N+ +A+  Q  D GTA + V KF DL++ + + 
Sbjct: 187 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 246

Query: 105 LTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKVK 164
           +  LN              P    +   +M+  Q  S+  GD  P  +DWR++G ++KVK
Sbjct: 247 IY-LN--------------PLLREEPGNKMK--QAKSV--GDLAPPEWDWRSKGAVTKVK 287

Query: 165 EQGKCACCWAFSAVGVVE 182
           +QG C  CWAFS  G VE
Sbjct: 288 DQGMCGSCWAFSVTGNVE 305


>gi|18202415|sp|P82474.1|CPGP2_ZINOF RecName: Full=Zingipain-2; AltName: Full=Cysteine proteinase GP-II
 gi|6137410|pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
 gi|6137411|pdb|1CQD|B Chain B, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
 gi|6137412|pdb|1CQD|C Chain C, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
 gi|6137413|pdb|1CQD|D Chain D, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
          Length = 221

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 107/193 (55%), Gaps = 18/193 (9%)

Query: 294 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLVDCDM 353
           DDLP++ DWR  G +  VK QG C  CWAFS V  VE ++ I    L  LS QQLVDC  
Sbjct: 1   DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTT 60

Query: 354 SNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCLVGEEEGFKVKVKEYSRIPY 413
           +N GC GG M+ A Q+I++NGG+ S++ YPY+  +   G          V +  Y  +P 
Sbjct: 61  ANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQD---GICNSTVNAPVVSIDSYENVPS 117

Query: 414 GEEEEMKKWVATRGPLSVGMNANGLFY--YSGGV------IDLNQRL----YGT--SIPY 459
             E+ ++K VA + P+SV M+A G  +  Y  G+      I  N  L    YGT     +
Sbjct: 118 HNEQSLQKAVANQ-PVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYGTENDKDF 176

Query: 460 WIVKNSWGSDWGE 472
           WIVKNSWG +WGE
Sbjct: 177 WIVKNSWGKNWGE 189



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 92/161 (57%), Gaps = 15/161 (9%)

Query: 493 VLPSKLSRLATEKLVDCDMSNGGCNGGRMDDALQYIIDNGGVVSDQAYPYKASESERGCL 552
           ++   L  L+ ++LVDC  +N GC GG M+ A Q+I++NGG+ S++ YPY+  +   G  
Sbjct: 42  IVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQD---GIC 98

Query: 553 VGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFY--YSGGVIDLNQRL 610
                   V +  Y  +P   E+ ++K VA + P+SV M+A G  +  Y  G+   +   
Sbjct: 99  NSTVNAPVVSIDSYENVPSHNEQSLQKAVANQ-PVSVTMDAAGRDFQLYRSGIFTGS--- 154

Query: 611 CNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGE 651
           CN  A NHAL +VGYG E  KD     +WIVKNSWG +WGE
Sbjct: 155 CNISA-NHALTVVGYGTENDKD-----FWIVKNSWGKNWGE 189



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 146 DDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQH 199
           DDLP++ DWR  G +  VK QG C  CWAFS V  VE ++ I   +L  LS Q 
Sbjct: 1   DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQ 54


>gi|343477446|emb|CCD11725.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 163/337 (48%), Gaps = 47/337 (13%)

Query: 170 ACCWAFSAVGVVEAMHAIQGNNLTELSVQHHDKVYSSVEDLLRRHENFVTNVEKAEDYQS 229
           A C+   A+GV+ A  ++Q         Q + + Y    +   R   F  N+E+A++ ++
Sbjct: 20  AACFVPVALGVLHAEQSLQ-QQFAAFK-QKYSRSYRDATEEAFRFRVFKQNMERAKE-EA 76

Query: 230 EDSGTAVFGVNKFFDLSESDLQQLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNS 289
             +  A FGV +F D+S  + +        +  E    +L+ P       T         
Sbjct: 77  AANPYATFGVTRFSDMSPEEFRA----TYHNGAEYYAAALKRPRKVVNVST--------- 123

Query: 290 LRHGDDLPEAFDWRAEGVISKVKEQGKCACCWAFSAVGVVEAMHAIQGNSLTELSVQQLV 349
                  PEA DWR +G ++ VK+QGKC   WAF+ +G +E    I G+ LT LS Q LV
Sbjct: 124 ----GKAPEAVDWRKKGAVTPVKDQGKCDSSWAFTVIGNIEGQWKIAGHELTSLSEQMLV 179

Query: 350 DCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKA------SESERGCLVGEEEGF 401
            CD ++ GC  G MD A ++I+  ++G V ++Q+YPY +      + ++ G +VG     
Sbjct: 180 SCDTNDLGCRAGFMDTAFKWIVSPNDGNVFTEQSYPYASGGGNVPACNKSGKVVGANIDD 239

Query: 402 KVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVID--LNQRLYGTSI-- 457
            V + +        E  + +W+A  GP+++ ++A     Y+GGV+   +++ +   ++  
Sbjct: 240 HVHILD-------NENAIAEWLAKNGPVAIAVDATSFQRYTGGVLTSCISKEVNSAALLV 292

Query: 458 --------PYWIVKNSWGSDWGEKVEDKVGSSGNRTR 486
                   PYWI+KNSWG  WGE+   ++    N+ R
Sbjct: 293 GYDDTSKPPYWIIKNSWGKGWGEEGYIRIEKGTNQCR 329



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 24/164 (14%)

Query: 497 KLSRLATEKLVDCDMSNGGCNGGRMDDALQYII--DNGGVVSDQAYPYKA------SESE 548
           +L+ L+ + LV CD ++ GC  G MD A ++I+  ++G V ++Q+YPY +      + ++
Sbjct: 169 ELTSLSEQMLVSCDTNDLGCRAGFMDTAFKWIVSPNDGNVFTEQSYPYASGGGNVPACNK 228

Query: 549 RGCLVGEEEGFKVKVKEYSRIPYGEEEEMKKWVATRGPLSVGMNANGLFYYSGGVIDLNQ 608
            G +VG      V + +        E  + +W+A  GP+++ ++A     Y+GGV+    
Sbjct: 229 SGKVVGANIDDHVHILD-------NENAIAEWLAKNGPVAIAVDATSFQRYTGGVLTS-- 279

Query: 609 RLCNPKAQNHALIIVGYGEEEKKDGTSIPYWIVKNSWGSDWGEK 652
             C  K  N A ++VGY +  K      PYWI+KNSWG  WGE+
Sbjct: 280 --CISKEVNSAALLVGYDDTSKP-----PYWIIKNSWGKGWGEE 316



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 18/155 (11%)

Query: 44  RFLNFMRDHDKVYSSVEDLLRRHENFVTNVEKAEDYQREDSGTAVFEVNKFFDLSDSDLQ 103
           +F  F + + + Y    +   R   F  N+E+A++ +   +  A F V +F D+S  + +
Sbjct: 40  QFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKE-EAAANPYATFGVTRFSDMSPEEFR 98

Query: 104 QLTGLNLDSTLEDIQPSLQAPFSSNQTDTEMRAFQFNSLRHGDDLPEAFDWRAEGVISKV 163
                   +  E    +L+ P       T                PEA DWR +G ++ V
Sbjct: 99  A----TYHNGAEYYAAALKRPRKVVNVST-------------GKAPEAVDWRKKGAVTPV 141

Query: 164 KEQGKCACCWAFSAVGVVEAMHAIQGNNLTELSVQ 198
           K+QGKC   WAF+ +G +E    I G+ LT LS Q
Sbjct: 142 KDQGKCDSSWAFTVIGNIEGQWKIAGHELTSLSEQ 176


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.133    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,852,336,766
Number of Sequences: 23463169
Number of extensions: 481245352
Number of successful extensions: 918413
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5010
Number of HSP's successfully gapped in prelim test: 2156
Number of HSP's that attempted gapping in prelim test: 874520
Number of HSP's gapped (non-prelim): 22696
length of query: 655
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 506
effective length of database: 8,863,183,186
effective search space: 4484770692116
effective search space used: 4484770692116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)