Query psy11698
Match_columns 197
No_of_seqs 161 out of 693
Neff 7.3
Searched_HMMs 46136
Date Fri Aug 16 16:35:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11698.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11698hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3646|consensus 99.8 5.2E-19 1.1E-23 156.4 10.4 62 119-182 424-485 (486)
2 PF02932 Neur_chan_memb: Neuro 99.7 8.6E-18 1.9E-22 132.6 6.0 60 116-175 178-237 (237)
3 TIGR00860 LIC Cation transport 99.6 8.6E-15 1.9E-19 132.9 8.1 60 117-177 399-458 (459)
4 KOG3645|consensus 99.1 1.4E-10 2.9E-15 105.3 8.4 48 117-164 401-448 (449)
5 PF13721 SecD-TM1: SecD export 54.6 6.8 0.00015 28.4 1.2 28 157-184 3-30 (101)
6 PRK13743 conjugal transfer pro 51.1 35 0.00077 26.0 4.5 37 139-176 21-57 (141)
7 PRK14762 membrane protein; Pro 49.3 19 0.00042 19.5 2.1 18 157-174 2-19 (27)
8 cd00928 Cyt_c_Oxidase_VIIa Cyt 39.0 43 0.00094 21.7 2.9 24 153-176 25-48 (55)
9 KOG2678|consensus 37.0 1.4E+02 0.0031 25.0 6.4 33 121-155 192-224 (244)
10 KOG4647|consensus 36.0 58 0.0013 27.3 4.0 27 149-175 97-123 (263)
11 PF08414 NADPH_Ox: Respiratory 35.3 82 0.0018 22.9 4.2 32 120-158 8-39 (100)
12 PF11616 EZH2_WD-Binding: WD r 35.0 45 0.00098 18.8 2.2 22 130-151 4-25 (30)
13 PF11057 Cortexin: Cortexin of 33.4 52 0.0011 22.7 2.8 20 158-177 35-54 (81)
14 PF03904 DUF334: Domain of unk 29.6 1.7E+02 0.0036 24.6 5.7 26 160-185 158-187 (230)
15 PF00971 EIAV_GP90: EIAV coat 24.8 47 0.001 28.9 1.7 38 129-176 12-49 (385)
16 PF08372 PRT_C: Plant phosphor 20.6 2.4E+02 0.0052 22.1 4.8 21 156-176 93-113 (156)
17 COG5117 NOC3 Protein involved 20.0 3.7E+02 0.0081 25.2 6.5 50 117-166 367-416 (657)
No 1
>KOG3646|consensus
Probab=99.79 E-value=5.2e-19 Score=156.42 Aligned_cols=62 Identities=32% Similarity=0.599 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHhhchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCcccc
Q psy11698 119 PEASKATEAVEFIAEHLRSEDQYIQIREDWKYVAMVIDRLQLYIFFIVTTAGTLGILMDAPHIF 182 (197)
Q Consensus 119 ~~l~~~~~~v~~Ia~~~~~~~~~~~~~~dWk~vA~VlDRlfl~if~~~~~~~t~~i~~~~p~~~ 182 (197)
.++..+++.+++|.++++++++++++++||||+|||+||+||++|+++.+++ +|++.+|++.
T Consensus 424 ~~~~~i~~~~~~~~~r~~~~~~~~~~~~dWkFAAmvVDRlCL~~Fs~fiii~--~i~~~~p~l~ 485 (486)
T KOG3646|consen 424 KELHLILKELRAILDRMEEDDKEEALQSDWKFAAMVVDRLCLLAFSVFIVMC--GILLSAPHLV 485 (486)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH--HHhhcCCccC
Confidence 5788899999999999999999999999999999999999999999999888 8899999875
No 2
>PF02932 Neur_chan_memb: Neurotransmitter-gated ion-channel transmembrane region ion channel family signature gamma-aminobutyric acid (GABA) receptor signature nicotinic acetylcholine receptor signature; InterPro: IPR006029 Neurotransmitter ligand-gated ion channels are transmembrane receptor-ion channel complexes that open transiently upon binding of specific ligands, allowing rapid transmission of signals at chemical synapses [, ]. Five of these ion channel receptor families have been shown to form a sequence-related superfamily: Nicotinic acetylcholine receptor (AchR), an excitatory cation channel in vertebrates and invertebrates; in vertebrate motor endplates it is composed of alpha, beta, gamma and delta/epsilon subunits; in neurons it is composed of alpha and non-alpha (or beta) subunits []. Glycine receptor, an inhibitory chloride ion channel composed of alpha and beta subunits []. Gamma-aminobutyric acid (GABA) receptor, an inhibitory chloride ion channel; at least four types of subunits (alpha, beta, gamma and delta) are known []. Serotonin 5HT3 receptor, of which there are seven major types (5HT3-5HT7) []. Glutamate receptor, an excitatory cation channel of which at least three types have been described (kainate, N-methyl-D-aspartate (NMDA) and quisqualate) []. These receptors possess a pentameric structure (made up of varying subunits), surrounding a central pore. All known sequences of subunits from neurotransmitter-gated ion-channels are structurally related. They are composed of a large extracellular glycosylated N-terminal ligand-binding domain, followed by three hydrophobic transmembrane regions which form the ionic channel, followed by an intracellular region of variable length. A fourth hydrophobic region is found at the C-terminal of the sequence [, ]. This domain represents four transmembrane helices of a variety of neurotransmitter-gated ion-channels.; GO: 0006811 ion transport, 0016020 membrane; PDB: 1DXZ_A 3MRA_A 1EQ8_C 1OED_C 2PR9_P 1A11_A 1CEK_A 2BG9_E 2KSR_A 2K59_B ....
Probab=99.71 E-value=8.6e-18 Score=132.61 Aligned_cols=60 Identities=45% Similarity=0.643 Sum_probs=52.4
Q ss_pred cCcHHHHHHHHHHHHHHHHhhchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHh
Q psy11698 116 LLSPEASKATEAVEFIAEHLRSEDQYIQIREDWKYVAMVIDRLQLYIFFIVTTAGTLGIL 175 (197)
Q Consensus 116 ~~~~~l~~~~~~v~~Ia~~~~~~~~~~~~~~dWk~vA~VlDRlfl~if~~~~~~~t~~i~ 175 (197)
...+.++++.+++++|++|++++++.+++++||+++|+||||+|+|+|.+++++++++++
T Consensus 178 ~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~ew~~~A~viDR~~~~~F~i~f~~~~i~yw 237 (237)
T PF02932_consen 178 SLSPSLRRILEGVRFIAEHLREQDEEEEIKEEWKFVAMVIDRLFRILFPIAFILFNIVYW 237 (237)
T ss_dssp TGGG----HHHHHHHHHHHHHHHHHHHHHHHHHHSTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHhhhhcccceeecccccccccccccccccccHHHHHHHHHHHHHHHHHHHHhhhC
Confidence 345788999999999999999999999999999999999999999999999999999874
No 3
>TIGR00860 LIC Cation transporter family protein. selective while glycine receptors are anion selective).
Probab=99.55 E-value=8.6e-15 Score=132.86 Aligned_cols=60 Identities=25% Similarity=0.365 Sum_probs=56.5
Q ss_pred CcHHHHHHHHHHHHHHHHhhchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q psy11698 117 LSPEASKATEAVEFIAEHLRSEDQYIQIREDWKYVAMVIDRLQLYIFFIVTTAGTLGILMD 177 (197)
Q Consensus 117 ~~~~l~~~~~~v~~Ia~~~~~~~~~~~~~~dWk~vA~VlDRlfl~if~~~~~~~t~~i~~~ 177 (197)
..++++++++++++| +|++++++.+++.+|||+||+|+||+|||+|.++++++|+++++.
T Consensus 399 ~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~W~~~a~viDr~~~~~f~~~~~~~~~~~~~~ 458 (459)
T TIGR00860 399 GDLDLAGILEEVRIA-HRFRKRDESEEVVRDWKFRAKVIDKLSRMAFPLAFLLFNIGYWMS 458 (459)
T ss_pred cCHHHHHHHhhhhHH-HHHHhhhhhhcccchhhhccchhhHHHHHHHHHHHHHhhhhheEe
Confidence 347999999999999 999999999999999999999999999999999999999998763
No 4
>KOG3645|consensus
Probab=99.14 E-value=1.4e-10 Score=105.28 Aligned_cols=48 Identities=71% Similarity=1.168 Sum_probs=45.9
Q ss_pred CcHHHHHHHHHHHHHHHHhhchhHHhhhhhhHHHHHHHHHHHHHHHHH
Q psy11698 117 LSPEASKATEAVEFIAEHLRSEDQYIQIREDWKYVAMVIDRLQLYIFF 164 (197)
Q Consensus 117 ~~~~l~~~~~~v~~Ia~~~~~~~~~~~~~~dWk~vA~VlDRlfl~if~ 164 (197)
..++++++.++++||++|++.++..++..+||++||+|+||+|||+|+
T Consensus 401 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~w~~va~v~dr~~l~~f~ 448 (449)
T KOG3645|consen 401 LSPELRKAIEGVDFIAEHLKSEDNFQEIREDWKYVAMVLDRLLLWIFL 448 (449)
T ss_pred ccHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHHHHHHhhheEe
Confidence 668999999999999999999999999999999999999999999986
No 5
>PF13721 SecD-TM1: SecD export protein N-terminal TM region
Probab=54.57 E-value=6.8 Score=28.41 Aligned_cols=28 Identities=21% Similarity=0.500 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHhHHHHhhcCcccccc
Q psy11698 157 RLQLYIFFIVTTAGTLGILMDAPHIFEY 184 (197)
Q Consensus 157 Rlfl~if~~~~~~~t~~i~~~~p~~~~~ 184 (197)
|.-+|.|+++.++-.++++...|++|..
T Consensus 3 ~yp~WKyllil~vl~~~~lyALPnlyge 30 (101)
T PF13721_consen 3 RYPLWKYLLILVVLLLGALYALPNLYGE 30 (101)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhccCC
Confidence 4556778877777778888888999864
No 6
>PRK13743 conjugal transfer protein TrbF; Provisional
Probab=51.12 E-value=35 Score=26.03 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=26.6
Q ss_pred hHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q psy11698 139 DQYIQIREDWKYVAMVIDRLQLYIFFIVTTAGTLGILM 176 (197)
Q Consensus 139 ~~~~~~~~dWk~vA~VlDRlfl~if~~~~~~~t~~i~~ 176 (197)
.+.++.+.|-+|...+.||. +++|+++...|+++.-.
T Consensus 21 ~KIrq~~rd~~y~~R~~~~Y-~~LfiVFl~AG~vLw~v 57 (141)
T PRK13743 21 LKIRQTKRDYDYERRVSDIY-FDLFIVFLTAGIVLWVI 57 (141)
T ss_pred HHHHhhhhhHHHHHHHHHHH-HHHHHHHHHhhHHHHHH
Confidence 34456677888888888875 67788777777766544
No 7
>PRK14762 membrane protein; Provisional
Probab=49.27 E-value=19 Score=19.47 Aligned_cols=18 Identities=22% Similarity=0.462 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHhHHHH
Q psy11698 157 RLQLYIFFIVTTAGTLGI 174 (197)
Q Consensus 157 Rlfl~if~~~~~~~t~~i 174 (197)
|+.+|+..++.++|.+.+
T Consensus 2 ki~lw~i~iifligllvv 19 (27)
T PRK14762 2 KIILWAVLIIFLIGLLVV 19 (27)
T ss_pred eeHHHHHHHHHHHHHHHH
Confidence 456787777777766554
No 8
>cd00928 Cyt_c_Oxidase_VIIa Cytochrome c oxidase subunit VIIa. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Found only in eukaryotes, subunit VIIa has two tissue-specific isoforms that are expressed in a developmental manner. VIIa-H is expressed in heart and skeletal muscle but not smooth muscle. VIIa-L is expressed in liver and non-muscle tissues.
Probab=38.96 E-value=43 Score=21.67 Aligned_cols=24 Identities=29% Similarity=0.283 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHhh
Q psy11698 153 MVIDRLQLYIFFIVTTAGTLGILM 176 (197)
Q Consensus 153 ~VlDRlfl~if~~~~~~~t~~i~~ 176 (197)
=+.|+++..+-+..|++||...+.
T Consensus 25 G~~D~~LYr~Tm~L~~vG~~~~~~ 48 (55)
T cd00928 25 GVVDRILYRLTMALTVVGTGYSLY 48 (55)
T ss_pred CchhHHHHHHHHHHHHHhHHHHHH
Confidence 378999999999999999987654
No 9
>KOG2678|consensus
Probab=36.99 E-value=1.4e+02 Score=24.99 Aligned_cols=33 Identities=18% Similarity=0.370 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHhhchhHHhhhhhhHHHHHHHH
Q psy11698 121 ASKATEAVEFIAEHLRSEDQYIQIREDWKYVAMVI 155 (197)
Q Consensus 121 l~~~~~~v~~Ia~~~~~~~~~~~~~~dWk~vA~Vl 155 (197)
+....+++....++++.-+.... .+|-+++|+|
T Consensus 192 ~D~N~~~L~~~Serve~y~ksk~--s~wf~~~miI 224 (244)
T KOG2678|consen 192 IDVNSQGLMDVSERVEKYDKSKL--SYWFYITMII 224 (244)
T ss_pred HhHHHHHHHhhhHHHHHHHHhhh--hHHHHHHHHH
Confidence 33444455555555554444332 7888888764
No 10
>KOG4647|consensus
Probab=35.97 E-value=58 Score=27.30 Aligned_cols=27 Identities=33% Similarity=0.573 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHh
Q psy11698 149 KYVAMVIDRLQLYIFFIVTTAGTLGIL 175 (197)
Q Consensus 149 k~vA~VlDRlfl~if~~~~~~~t~~i~ 175 (197)
+++|..+|-++|++|-++.+.||+-++
T Consensus 97 R~~AE~IDffilf~~K~~Iv~g~~~l~ 123 (263)
T KOG4647|consen 97 RLLAELIDFFILFSFKLAIVGGTLSLL 123 (263)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhh
Confidence 468999999999999999888887654
No 11
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=35.27 E-value=82 Score=22.94 Aligned_cols=32 Identities=28% Similarity=0.527 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHhhchhHHhhhhhhHHHHHHHHHHH
Q psy11698 120 EASKATEAVEFIAEHLRSEDQYIQIREDWKYVAMVIDRL 158 (197)
Q Consensus 120 ~l~~~~~~v~~Ia~~~~~~~~~~~~~~dWk~vA~VlDRl 158 (197)
-.+.++++++||....... +.|+.|-.-.|.+
T Consensus 8 ~A~~ALkGLrFIskt~~~~-------~~W~~VE~RFd~L 39 (100)
T PF08414_consen 8 GAQRALKGLRFISKTTGGA-------DGWKEVEKRFDKL 39 (100)
T ss_dssp HHHHHHHHHHHHHHHH------------HHHHHHHHHHH
T ss_pred HHHHHHhcccceecCCCCc-------cCHHHHHHHHHHh
Confidence 3578999999999877652 2399988888876
No 12
>PF11616 EZH2_WD-Binding: WD repeat binding protein EZH2; InterPro: IPR021654 This family of proteins represents Enhancer of zest homologue 2, (EZH2) a 30 residue peptide which binds to a WD-repeat domain of EED by residues 39-68. EED is a component of PRC2 complex which is involved in gene expression []. This interaction is required for the HMTase activity of PCR2 []. ; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 2QXV_B.
Probab=35.02 E-value=45 Score=18.79 Aligned_cols=22 Identities=18% Similarity=0.484 Sum_probs=17.6
Q ss_pred HHHHHhhchhHHhhhhhhHHHH
Q psy11698 130 FIAEHLRSEDQYIQIREDWKYV 151 (197)
Q Consensus 130 ~Ia~~~~~~~~~~~~~~dWk~v 151 (197)
|.+++-|-+++-+-..+|||..
T Consensus 4 f~sNr~Ki~e~t~iLN~eWk~l 25 (30)
T PF11616_consen 4 FSSNRQKIQERTDILNEEWKKL 25 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-
T ss_pred hHhhHHHHHHHHHHHHHHHHHh
Confidence 6777788888888889999953
No 13
>PF11057 Cortexin: Cortexin of kidney; InterPro: IPR020066 Cortexin is a neuron-specific, 82-residue membrane protein which is found especially in vertebrate brain cortex tissue. It may mediate extracellular or intracellular signalling of cortical neurons during forebrain development. Cortexin is present at significant levels in the foetal brain, suggesting that it may be important to neurons of both the developing and adult cerebral cortex. Cortexin has a conserved single membrane-spanning region in the middle of each sequence []. In humans, there is selective expression of Cortexin 3 (CTXN3) in the kidney as well as the brain []. This entry contains Cortexins 1, 2 and 3.; GO: 0031224 intrinsic to membrane
Probab=33.45 E-value=52 Score=22.73 Aligned_cols=20 Identities=25% Similarity=0.331 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHhHHHHhhc
Q psy11698 158 LQLYIFFIVTTAGTLGILMD 177 (197)
Q Consensus 158 lfl~if~~~~~~~t~~i~~~ 177 (197)
+||++|+.+.++..+.|++.
T Consensus 35 ~~L~~fL~~liVRCfrIllD 54 (81)
T PF11057_consen 35 GLLCLFLGLLIVRCFRILLD 54 (81)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 57889999999999999986
No 14
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function.
Probab=29.64 E-value=1.7e+02 Score=24.56 Aligned_cols=26 Identities=15% Similarity=0.490 Sum_probs=14.9
Q ss_pred HHHHHHHHHHhHH----HHhhcCccccccc
Q psy11698 160 LYIFFIVTTAGTL----GILMDAPHIFEYV 185 (197)
Q Consensus 160 l~if~~~~~~~t~----~i~~~~p~~~~~~ 185 (197)
|.+|+++.++.|+ +=|+-++++|+..
T Consensus 158 l~Vf~LF~lvmt~g~d~m~fl~v~~ly~~i 187 (230)
T PF03904_consen 158 LFVFMLFALVMTIGSDFMDFLHVDHLYKAI 187 (230)
T ss_pred HHHHHHHHHHHHhcccchhhhhHHHHHHHH
Confidence 4555555555544 4466667777554
No 15
>PF00971 EIAV_GP90: EIAV coat protein, gp90; InterPro: IPR001361 Equine infectious anemia virus(EIAV) belongs to the family retroviridae. EIAV gp90 is hypervariable in the carboxyl-end region and more stable in the amino-end region. This variability is a pathogenicity factor that allows the evasion of the host's immune response [].; GO: 0005198 structural molecule activity, 0019028 viral capsid
Probab=24.84 E-value=47 Score=28.87 Aligned_cols=38 Identities=21% Similarity=0.444 Sum_probs=28.0
Q ss_pred HHHHHHhhchhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q psy11698 129 EFIAEHLRSEDQYIQIREDWKYVAMVIDRLQLYIFFIVTTAGTLGILM 176 (197)
Q Consensus 129 ~~Ia~~~~~~~~~~~~~~dWk~vA~VlDRlfl~if~~~~~~~t~~i~~ 176 (197)
||--+..|+++++++-..+|=.++|. +.|++||.|-|+
T Consensus 12 ryqe~n~kee~ke~krrn~wwkigm~----------llcl~gttg~~l 49 (385)
T PF00971_consen 12 RYQEMNLKEESKEEKRRNNWWKIGMF----------LLCLLGTTGGIL 49 (385)
T ss_pred hhHHhhhhhhhhhhhcccchHHHhHH----------HHhhhcCCcceE
Confidence 56667778888888889999888773 456677766554
No 16
>PF08372 PRT_C: Plant phosphoribosyltransferase C-terminal; InterPro: IPR013583 This domain is found at the C terminus of phosphoribosyltransferases and phosphoribosyltransferase-like proteins. It contains putative transmembrane regions. It often appears together with calcium-ion dependent C2 domains (IPR000008 from INTERPRO).
Probab=20.60 E-value=2.4e+02 Score=22.14 Aligned_cols=21 Identities=10% Similarity=0.213 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHhHHHHhh
Q psy11698 156 DRLQLYIFFIVTTAGTLGILM 176 (197)
Q Consensus 156 DRlfl~if~~~~~~~t~~i~~ 176 (197)
|...-++|+++|++.++++++
T Consensus 93 dP~aT~lf~~~clv~avvly~ 113 (156)
T PF08372_consen 93 DPRATALFVVFCLVAAVVLYF 113 (156)
T ss_pred CccHHHHHHHHHHHHHHHHHH
Confidence 444445666666655554443
No 17
>COG5117 NOC3 Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion]
Probab=20.02 E-value=3.7e+02 Score=25.25 Aligned_cols=50 Identities=16% Similarity=0.190 Sum_probs=42.9
Q ss_pred CcHHHHHHHHHHHHHHHHhhchhHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy11698 117 LSPEASKATEAVEFIAEHLRSEDQYIQIREDWKYVAMVIDRLQLYIFFIV 166 (197)
Q Consensus 117 ~~~~l~~~~~~v~~Ia~~~~~~~~~~~~~~dWk~vA~VlDRlfl~if~~~ 166 (197)
++..++++-++..-|.+-|++.++..+.+++-|+-..+++-+|-.-|.+.
T Consensus 367 lsKK~RK~~KE~~~I~~Emr~ae~i~~a~e~eknqseIlkiif~~Yf~vL 416 (657)
T COG5117 367 LSKKLRKIEKERLRIQSEMRDAEDIEEAIEEEKNQSEILKIIFRLYFMVL 416 (657)
T ss_pred hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 66788999999999999999999999999999999999988876555543
Done!